Query psy3652
Match_columns 394
No_of_seqs 227 out of 1776
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 22:11:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.1E-82 3.6E-87 646.5 35.4 344 36-383 6-485 (490)
2 2j6l_A Aldehyde dehydrogenase 100.0 1.2E-78 4E-83 619.9 37.9 366 14-381 3-499 (500)
3 3ifg_A Succinate-semialdehyde 100.0 7.5E-79 2.6E-83 618.7 35.8 342 36-380 12-483 (484)
4 4f3x_A Putative aldehyde dehyd 100.0 1.1E-78 3.6E-83 619.2 35.3 343 36-381 25-497 (498)
5 3ek1_A Aldehyde dehydrogenase; 100.0 1.3E-78 4.5E-83 618.9 35.0 344 36-382 32-503 (504)
6 3prl_A NADP-dependent glyceral 100.0 2.5E-78 8.6E-83 617.4 36.3 349 36-386 11-488 (505)
7 3ed6_A Betaine aldehyde dehydr 100.0 3.3E-78 1.1E-82 618.1 37.2 344 36-382 32-511 (520)
8 3k2w_A Betaine-aldehyde dehydr 100.0 4.3E-78 1.5E-82 615.3 37.2 347 34-383 10-490 (497)
9 3rh9_A Succinate-semialdehyde 100.0 5.1E-78 1.8E-82 614.8 36.2 343 36-382 11-485 (506)
10 3u4j_A NAD-dependent aldehyde 100.0 1E-77 3.5E-82 615.5 37.0 345 36-383 22-500 (528)
11 3iwj_A Putative aminoaldehyde 100.0 3.1E-77 1.1E-81 609.8 37.9 345 35-382 6-490 (503)
12 3jz4_A Succinate-semialdehyde 100.0 5.4E-77 1.9E-81 605.6 38.8 342 36-380 9-480 (481)
13 4e4g_A Methylmalonate-semialde 100.0 6.7E-78 2.3E-82 616.0 31.9 348 35-384 25-508 (521)
14 3pqa_A Lactaldehyde dehydrogen 100.0 2.1E-77 7.3E-82 607.9 34.7 338 39-383 2-466 (486)
15 2d4e_A 5-carboxymethyl-2-hydro 100.0 1.1E-76 3.6E-81 607.2 39.5 347 36-386 26-510 (515)
16 3qan_A 1-pyrroline-5-carboxyla 100.0 4.5E-77 1.5E-81 612.0 35.8 346 35-383 36-518 (538)
17 2imp_A Lactaldehyde dehydrogen 100.0 1.3E-76 4.5E-81 602.5 37.9 344 34-380 4-478 (479)
18 3r31_A BADH, betaine aldehyde 100.0 3E-77 1E-81 610.6 33.4 343 33-382 11-489 (517)
19 2o2p_A Formyltetrahydrofolate 100.0 6.4E-77 2.2E-81 608.2 35.2 343 36-381 36-517 (517)
20 1wnd_A Putative betaine aldehy 100.0 1.2E-76 4E-81 603.7 37.0 341 37-380 24-494 (495)
21 3r64_A NAD dependent benzaldeh 100.0 1.7E-76 5.7E-81 605.1 38.2 351 36-389 12-493 (508)
22 1a4s_A ALDH, betaine aldehyde 100.0 1.2E-76 4E-81 605.2 36.5 342 36-381 19-496 (503)
23 4dng_A Uncharacterized aldehyd 100.0 2.6E-76 8.9E-81 601.5 38.4 345 36-382 6-479 (485)
24 1euh_A NADP dependent non phos 100.0 2.3E-76 7.8E-81 600.1 36.9 346 33-381 1-474 (475)
25 3i44_A Aldehyde dehydrogenase; 100.0 3E-76 1E-80 601.0 35.6 340 32-378 21-495 (497)
26 1bxs_A Aldehyde dehydrogenase; 100.0 7.3E-76 2.5E-80 598.7 38.2 342 36-381 20-496 (501)
27 3b4w_A Aldehyde dehydrogenase; 100.0 1.5E-76 5E-81 603.4 32.9 344 36-384 8-485 (495)
28 2ve5_A BADH, betaine aldehyde 100.0 6.5E-76 2.2E-80 599.2 37.1 343 36-382 6-484 (490)
29 2w8n_A Succinate-semialdehyde 100.0 7.8E-76 2.7E-80 597.3 35.7 351 27-381 4-486 (487)
30 1o04_A Aldehyde dehydrogenase, 100.0 4.9E-76 1.7E-80 599.9 33.7 342 36-381 19-495 (500)
31 1uxt_A Glyceraldehyde-3-phosph 100.0 2.9E-76 9.8E-81 602.1 30.9 357 24-384 8-495 (501)
32 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.7E-75 2.3E-79 594.3 38.3 343 36-380 37-515 (516)
33 1t90_A MMSDH, probable methylm 100.0 2.6E-75 8.9E-80 593.7 33.5 343 37-381 6-480 (486)
34 3ros_A NAD-dependent aldehyde 100.0 3.4E-75 1.2E-79 591.5 33.5 328 51-382 5-459 (484)
35 3ty7_A Putative aldehyde dehyd 100.0 4.3E-75 1.5E-79 591.5 31.1 338 33-379 4-475 (478)
36 4h7n_A Aldehyde dehydrogenase; 100.0 1.7E-74 5.8E-79 586.2 35.2 336 48-386 4-469 (474)
37 3etf_A Putative succinate-semi 100.0 1.2E-73 4.2E-78 578.7 34.1 330 48-381 5-461 (462)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 6.2E-72 2.1E-76 575.4 34.6 355 26-381 54-551 (563)
39 3lns_A Benzaldehyde dehydrogen 100.0 4.9E-72 1.7E-76 565.8 32.7 329 50-380 6-456 (457)
40 3ju8_A Succinylglutamic semial 100.0 9E-72 3.1E-76 568.1 32.9 335 37-381 6-471 (490)
41 4f9i_A Proline dehydrogenase/d 100.0 4.9E-71 1.7E-75 598.1 35.3 346 35-382 530-1011(1026)
42 2y53_A Aldehyde dehydrogenase 100.0 2.7E-71 9.2E-76 570.2 31.3 341 37-380 8-518 (534)
43 3v4c_A Aldehyde dehydrogenase 100.0 8.6E-71 3E-75 565.7 31.9 359 18-383 12-519 (528)
44 3sza_A Aldehyde dehydrogenase, 100.0 1.1E-69 3.7E-74 549.4 32.3 313 68-382 14-449 (469)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-67 7.6E-72 538.3 30.2 329 48-378 5-480 (510)
46 2h5g_A Delta 1-pyrroline-5-car 100.0 2.1E-64 7.3E-69 509.6 22.9 328 53-386 10-440 (463)
47 3haz_A Proline dehydrogenase; 100.0 4.8E-63 1.6E-67 534.6 31.3 312 66-381 544-987 (1001)
48 1o20_A Gamma-glutamyl phosphat 100.0 4.1E-59 1.4E-63 467.3 21.2 301 70-382 12-423 (427)
49 1vlu_A Gamma-glutamyl phosphat 100.0 6.1E-59 2.1E-63 470.4 19.0 301 73-383 15-442 (468)
50 4ghk_A Gamma-glutamyl phosphat 100.0 4.4E-58 1.5E-62 462.0 22.2 302 71-381 25-439 (444)
51 3k9d_A LMO1179 protein, aldehy 100.0 5.4E-57 1.9E-61 456.6 23.3 316 64-387 4-455 (464)
52 3my7_A Alcohol dehydrogenase/a 100.0 4.1E-55 1.4E-59 441.6 20.6 302 66-381 1-449 (452)
53 4gic_A HDH, histidinol dehydro 94.4 3.8 0.00013 39.7 19.1 79 289-377 313-399 (423)
54 1kae_A HDH, histidinol dehydro 90.2 12 0.0004 36.5 16.2 83 285-378 303-393 (434)
55 3fgh_A Transcription factor A, 35.7 62 0.0021 22.0 4.9 36 80-115 29-64 (67)
56 1use_A VAsp, vasodilator-stimu 32.9 30 0.001 22.2 2.4 29 96-124 13-41 (45)
57 2eqz_A High mobility group pro 28.2 88 0.003 22.5 4.9 35 81-115 49-83 (86)
58 2crj_A SWI/SNF-related matrix- 24.8 1E+02 0.0035 22.5 4.7 36 81-116 39-74 (92)
59 2co9_A Thymus high mobility gr 23.5 1.2E+02 0.0041 22.7 4.9 41 81-121 49-89 (102)
60 1v63_A Nucleolar transcription 23.3 1.2E+02 0.004 22.8 4.9 39 81-119 38-76 (101)
61 1hry_A Human SRY; DNA, DNA-bin 22.5 90 0.0031 21.7 3.8 32 81-112 36-67 (76)
62 1mul_A NS2, HU-2, DNA binding 21.2 1.9E+02 0.0066 20.8 5.6 37 110-146 2-38 (90)
63 1hme_A High mobility group pro 21.0 88 0.003 21.8 3.5 34 81-114 38-71 (77)
64 1b8z_A Protein (histonelike pr 20.7 1.9E+02 0.0066 20.8 5.5 37 110-146 2-38 (90)
65 1gt0_D Transcription factor SO 20.3 1E+02 0.0034 21.7 3.7 32 81-112 34-65 (80)
66 3u2b_C Transcription factor SO 20.0 92 0.0032 21.8 3.5 32 81-112 34-65 (79)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.1e-82 Score=646.51 Aligned_cols=344 Identities=31% Similarity=0.525 Sum_probs=319.7
Q ss_pred CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+ .++++++++||+||+++++++.++.+|+++||++|++||+.|+.+|+++|.++|++++++|++++++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999998 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||+.+++. |+..+++.++|++++++++.++..+.. ++...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999975 799999999999999998877665543 456678899999999999999999999999999
Q ss_pred HHh-----------------------------------------------------------------hHHHHHh-----
Q psy3652 193 IAL-----------------------------------------------------------------VGVAVQS----- 202 (394)
Q Consensus 193 ~aL-----------------------------------------------------------------~g~~i~~----- 202 (394)
+|| +|+.+.+
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999 7766643
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~ 324 (490)
T 2wme_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCc
Confidence 56899999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 256 --------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 256 --------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
.. ...|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (490)
T 2wme_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHH
Confidence 00 125899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~ 379 (394)
|+++|+++|||++||||+|.+++++++ .++++|+|+||+.. ...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 405 i~~aN~~~yGL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 405 IRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWG-ESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCS-CCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCCeEEEEcCCHHHHHHHH--HHCCeeEEEEeCCC-CCCCCCCcccccccccCchhHHHHHHHhhceeEEEE
Confidence 999999999999999999999999999 88999999999754 455779999999999999999999999999999999
Q ss_pred ecCC
Q psy3652 380 NHGK 383 (394)
Q Consensus 380 ~~~~ 383 (394)
+++.
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 9743
No 2
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.2e-78 Score=619.93 Aligned_cols=366 Identities=65% Similarity=1.103 Sum_probs=333.1
Q ss_pred ccccccCCcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCCh
Q psy3652 14 RSYSDSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPA 93 (394)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~ 93 (394)
++.+++..++..|++|+.+ ...+.||||+|+.++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~ 80 (500)
T 2j6l_A 3 STLLINQPQYAWLKELGLR--EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPA 80 (500)
T ss_dssp -CCGGGSGGGGGGGGGTCC--SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCH
T ss_pred cccccccchhHHHHhcCCC--CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCH
Confidence 3456677778899998855 56778999999977788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeecccee
Q psy3652 94 PRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGV 173 (394)
Q Consensus 94 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 173 (394)
++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|+++.++++.+...+...++...++.++|+||
T Consensus 81 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 160 (500)
T 2j6l_A 81 PKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGL 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccE
Confidence 99999999999999999999999999999999999999999999999999999887776654443344556778999999
Q ss_pred EEEEccCCchhHhHHHHHHHHh----------------------------------------------------------
Q psy3652 174 VGIISAFNFPVAVYGWNAAIAL---------------------------------------------------------- 195 (394)
Q Consensus 174 V~~I~p~N~P~~~~~~~~~~aL---------------------------------------------------------- 195 (394)
|++|+|||||+.+.++++++||
T Consensus 161 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~v 240 (500)
T 2j6l_A 161 VGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERV 240 (500)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTC
T ss_pred EEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCc
Confidence 9999999999999999999999
Q ss_pred ----------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------
Q psy3652 196 ----------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------ 255 (394)
Q Consensus 196 ----------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------ 255 (394)
+|+.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 241 d~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 320 (500)
T 2j6l_A 241 NLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVV 320 (500)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHH
Confidence 7777765 46899999999999999999999999999999999999999999999999999
Q ss_pred -----------------------------------------------------cCCCCCceecCeEEEcCCCCCcccccc
Q psy3652 256 -----------------------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRE 282 (394)
Q Consensus 256 -----------------------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE 282 (394)
..+..|+|++|||+.+++++|++++||
T Consensus 321 ~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eE 400 (500)
T 2j6l_A 321 NRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTE 400 (500)
T ss_dssp HHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSC
T ss_pred HHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCc
Confidence 001248899999999999999999999
Q ss_pred cccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCC
Q psy3652 283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRE 362 (394)
Q Consensus 283 ~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~ 362 (394)
+||||++|++|+|+||||+++|+++|||++||||+|.+++++++.+.++++|+|+||++.....+.+||||+|.||+|++
T Consensus 401 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~ 480 (500)
T 2j6l_A 401 TFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRE 480 (500)
T ss_dssp CSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCE
T ss_pred ccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999444599999999986555567899999999999999
Q ss_pred chHHHHHhhhheeEEEEec
Q psy3652 363 SGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 363 ~g~~~l~~f~~~k~v~~~~ 381 (394)
+|.+++++|++.|+|++++
T Consensus 481 ~g~~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 481 SGSDAWKQYMRRSTCTINY 499 (500)
T ss_dssp ESTTGGGGGEEEEEEEEEC
T ss_pred chHHHHHHhhceEEEEEeC
Confidence 9999999999999998864
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=7.5e-79 Score=618.68 Aligned_cols=342 Identities=28% Similarity=0.479 Sum_probs=318.6
Q ss_pred CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+ .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999997 3678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
|++++++|+|||..+++.|+..+++.++|+++..+++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665554434667788999999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~----~~ 204 (394)
|| +|+.|++ ++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~ 251 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV 251 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccC
Confidence 99 7788765 46
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 252 k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 331 (484)
T 3ifg_A 252 KKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLG 331 (484)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCC
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652 256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305 (394)
Q Consensus 256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~ 305 (394)
..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 411 (484)
T 3ifg_A 332 PLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLAND 411 (484)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhC
Confidence 00126899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
++|||+++|||+|.+++++++ .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 412 ~~~GL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 412 TEFGLAAYLYSRDIGRVWRVA--EALEYGMVGINTGL-ISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp SSEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSC-CCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999 88999999999854 4567899999999999999999999999999999864
No 4
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.1e-78 Score=619.20 Aligned_cols=343 Identities=27% Similarity=0.463 Sum_probs=317.7
Q ss_pred CCCceeCCeeccCCC-eeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652 36 NPGVYDGTSWKANGE-IIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114 (394)
Q Consensus 36 ~~~~~i~G~~~~~~~-~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 114 (394)
..++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus 25 ~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 104 (498)
T 4f3x_A 25 DTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEF 104 (498)
T ss_dssp CCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 467899999984322 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 115 GQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 115 ~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
++++++|+|||..++ +.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 105 a~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 184 (498)
T 4f3x_A 105 AALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184 (498)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHH
Confidence 999999999999999 8899999999999999998876665443334566788999999999999999999999999999
Q ss_pred Hh----------------------------------------------------------------hHHHHHh----hhh
Q psy3652 194 AL----------------------------------------------------------------VGVAVQS----RFG 205 (394)
Q Consensus 194 aL----------------------------------------------------------------~g~~i~~----~~~ 205 (394)
|| +|+.|++ ++|
T Consensus 185 ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~k 264 (498)
T 4f3x_A 185 AIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVK 264 (498)
T ss_dssp HHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHTTTC
T ss_pred HHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCC
Confidence 99 6787765 568
Q ss_pred hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------------
Q psy3652 206 KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------ 255 (394)
Q Consensus 206 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------ 255 (394)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 265 ~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gp 344 (498)
T 4f3x_A 265 RTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGP 344 (498)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCC
T ss_pred ceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccCcccc
Confidence 99999999999999999999999999999999999999999999999999
Q ss_pred ---------------------c---------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652 256 ---------------------K---------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305 (394)
Q Consensus 256 ---------------------~---------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~ 305 (394)
. .+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 345 li~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 424 (498)
T 4f3x_A 345 LISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWAND 424 (498)
T ss_dssp CSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhc
Confidence 0 0125899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++|||++||||+|.+++++++ .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 425 ~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 425 SDYGLASSVWTKDISKAMRAA--SRLQYGCTWINTHFML-TNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp SSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCCHHHHHHHH--HhCCcceEEEcCCCCC-CCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 999999999999999999999 8899999999987544 478999999999999999999999999999998875
No 5
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.3e-78 Score=618.91 Aligned_cols=344 Identities=28% Similarity=0.444 Sum_probs=319.7
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999973 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
|++++++|+|||..+++.|+..+++.++|++++.+++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665554445667788999999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~----~~ 204 (394)
|| +|+.|++ ++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~l 271 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTI 271 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhc
Confidence 99 7777765 45
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 272 k~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 351 (504)
T 3ek1_A 272 KRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIG 351 (504)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccc
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred -------------------------cCC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC
Q psy3652 256 -------------------------KID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK 307 (394)
Q Consensus 256 -------------------------~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~ 307 (394)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 352 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~ 431 (504)
T 3ek1_A 352 PMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTI 431 (504)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSS
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCC
Confidence 001 1479999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652 308 QGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 308 ~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
|||++||||+|.+++++++ .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|+++++
T Consensus 432 ~GL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 432 FGLAAYFYTENFSRAIRVS--EALEYGMVGHNTGL-ISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp CCSEEEEECCBHHHHHHHH--HHSCCSEEEESCSC-CCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred CCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCC-CCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 9999999999999999999 88999999999864 456789999999999999999999999999999998753
No 6
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.5e-78 Score=617.39 Aligned_cols=349 Identities=27% Similarity=0.432 Sum_probs=318.6
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEI 90 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999973 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCC-C----CceeEeeeccceeEEEEccCCchhHhHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSER-P----GHVLLENWNPLGVVGIISAFNFPVAVYG 188 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVV~~I~p~N~P~~~~~ 188 (394)
|++++++|+|||..+++.|+..+++.++|+++.++++.+...+... + +...++.++|+|||++|+|||||+.+.+
T Consensus 91 la~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 170 (505)
T 3prl_A 91 IGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAA 170 (505)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHH
Confidence 9999999999999999999999999999999998887665443221 2 3456788999999999999999999999
Q ss_pred HHHHHHh-----------------------------------------------------------------hHHHHHhh
Q psy3652 189 WNAAIAL-----------------------------------------------------------------VGVAVQSR 203 (394)
Q Consensus 189 ~~~~~aL-----------------------------------------------------------------~g~~i~~~ 203 (394)
+++++|| +|+.|++.
T Consensus 171 ~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~ 250 (505)
T 3prl_A 171 AKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEK 250 (505)
T ss_dssp HHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 9999999 77888764
Q ss_pred --hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------c---------
Q psy3652 204 --FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------K--------- 256 (394)
Q Consensus 204 --~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------~--------- 256 (394)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ .
T Consensus 251 aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 330 (505)
T 3prl_A 251 AKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDAD 330 (505)
T ss_dssp CCSSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCS
T ss_pred ccCCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCc
Confidence 4899999999999999999999999999999999999999999999999998 0
Q ss_pred ----------------------------C--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652 257 ----------------------------I--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV 306 (394)
Q Consensus 257 ----------------------------~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~ 306 (394)
. ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 331 ~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~ 410 (505)
T 3prl_A 331 ITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQS 410 (505)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTS
T ss_pred CCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCC
Confidence 0 1247899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCccc
Q psy3652 307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEIT 386 (394)
Q Consensus 307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~~~ 386 (394)
+|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|+++++...+
T Consensus 411 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~~~~~~~ 488 (505)
T 3prl_A 411 DYGLQASIFTKDTDRAINIG--KHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLNLAENLY 488 (505)
T ss_dssp SEESEEEEECSCHHHHHHHH--HTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC-----
T ss_pred CCCeEEEEEcCCHHHHHHHH--HHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEeCCCccc
Confidence 99999999999999999999 8899999999997655667899999999999999999999999999999998765433
No 7
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.3e-78 Score=618.10 Aligned_cols=344 Identities=29% Similarity=0.470 Sum_probs=320.5
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHH--HHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHKL 111 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+.+|.++|.++|++++++|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 566899999973 67899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA 191 (394)
Q Consensus 112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 191 (394)
++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988777655543345667889999999999999999999999999
Q ss_pred HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652 192 AIAL-----------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 192 ~~aL-----------------------------------------------------------------~g~~i~~---- 202 (394)
++|| +|+.|++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa~ 271 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAAN 271 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 9999 7777765
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 272 ~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~ 351 (520)
T 3ed6_A 272 NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTE 351 (520)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCS
T ss_pred cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCc
Confidence 56899999999999999999999999999999999999999999999999999
Q ss_pred -------------------------------cCC-----CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 256 -------------------------------KID-----RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 256 -------------------------------~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 352 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 431 (520)
T 3ed6_A 352 MGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEA 431 (520)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHH
Confidence 000 35899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~ 379 (394)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||+.... .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 432 i~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~ 508 (520)
T 3ed6_A 432 IQLANDSIYGLAGAVFSKDIGKAQRVA--NKLKLGTVWINDFHPY-FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILT 508 (520)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESCSCCC-CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHH--HHCCcceEEECCCCCC-CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999 8899999999986544 5789999999999999999999999999999999
Q ss_pred ecC
Q psy3652 380 NHG 382 (394)
Q Consensus 380 ~~~ 382 (394)
+++
T Consensus 509 ~~~ 511 (520)
T 3ed6_A 509 NTN 511 (520)
T ss_dssp ESS
T ss_pred cCC
Confidence 875
No 8
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=4.3e-78 Score=615.32 Aligned_cols=347 Identities=30% Similarity=0.471 Sum_probs=321.1
Q ss_pred CCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652 34 SVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111 (394)
Q Consensus 34 ~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (394)
....++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44678999999973 5689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA 191 (394)
Q Consensus 112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 191 (394)
++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 90 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 169 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI 169 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988876655443345667889999999999999999999999999
Q ss_pred HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652 192 AIAL-----------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 192 ~~aL-----------------------------------------------------------------~g~~i~~---- 202 (394)
++|| +|+.|++
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~ 249 (497)
T 3k2w_A 170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE 249 (497)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTT
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhh
Confidence 9999 6788775
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 250 ~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~ 329 (497)
T 3k2w_A 250 YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQ 329 (497)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCS
T ss_pred cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 45899999999999999999999999999999999999999999999999999
Q ss_pred -------------------------------c--C-CC--CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 256 -------------------------------K--I-DR--PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 256 -------------------------------~--~-~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
. . +. .|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 330 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 409 (497)
T 3k2w_A 330 MGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQA 409 (497)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHH
Confidence 0 0 01 5899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~ 379 (394)
|+++|+++|||++||||+|.+++++++ .++++|+|+||+++.. .+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 410 i~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~ 486 (497)
T 3k2w_A 410 IEFCNDSIYGLSAYVHTQSFANINQAI--SDLEVGEVYINRGMGE-QHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYI 486 (497)
T ss_dssp HHHHTCSSEESEEEEECSBHHHHHHHH--HHCCSSEEEESCCSCC-CTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCCccchHHHHHHhcceEEEEE
Confidence 999999999999999999999999999 8899999999987544 4789999999999999999999999999999999
Q ss_pred ecCC
Q psy3652 380 NHGK 383 (394)
Q Consensus 380 ~~~~ 383 (394)
+++.
T Consensus 487 ~~~~ 490 (497)
T 3k2w_A 487 NEAE 490 (497)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 8754
No 9
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5.1e-78 Score=614.82 Aligned_cols=343 Identities=30% Similarity=0.473 Sum_probs=318.5
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 457899999983 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeee-ccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENW-NPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||..+++.|+..+++.++|+++.++++.+...+.. .+...++.+ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999998877655433 345667788 999999999999999999999999
Q ss_pred HHh-----------------------------------------------------------------hHHHHHh----h
Q psy3652 193 IAL-----------------------------------------------------------------VGVAVQS----R 203 (394)
Q Consensus 193 ~aL-----------------------------------------------------------------~g~~i~~----~ 203 (394)
+|| +|+.|++ +
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 999 7788775 4
Q ss_pred hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------------
Q psy3652 204 FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------------- 255 (394)
Q Consensus 204 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------------- 255 (394)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 250 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 329 (506)
T 3rh9_A 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDI 329 (506)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcc
Confidence 6899999999999999999999999999999999999999999999999999
Q ss_pred -------------------------------cCCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHH
Q psy3652 256 -------------------------------KIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWN 303 (394)
Q Consensus 256 -------------------------------~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~ 303 (394)
..+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 330 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 409 (506)
T 3rh9_A 330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG 409 (506)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 0011 68999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652 304 NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 304 n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
|+++|||++||||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|++++++|++.|+|+++..
T Consensus 410 N~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~ 485 (506)
T 3rh9_A 410 NDTEFGLASYVFTADAERAQRVA--AGLRFGHVGWNTGTG-PTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFA 485 (506)
T ss_dssp TCSSCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC--
T ss_pred hCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEEcCCCC-CCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCc
Confidence 99999999999999999999999 889999999998754 45679999999999999999999999999999988753
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1e-77 Score=615.51 Aligned_cols=345 Identities=26% Similarity=0.460 Sum_probs=320.7
Q ss_pred CCCceeCCeecc--CCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHH--HHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAY--AAWAALPAPRRGEIVRQIGDALRHK 110 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (394)
..++||||+|+. ++.+++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|++++++|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 467999999983 578999999999 99999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652 111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190 (394)
Q Consensus 111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 190 (394)
+++|++++++|+|||..++..|+..+++.++|+++.++++.+...+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 181 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASER 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877665554334566788999999999999999999999999
Q ss_pred HHHHh-----------------------------------------------------------------hHHHHHh---
Q psy3652 191 AAIAL-----------------------------------------------------------------VGVAVQS--- 202 (394)
Q Consensus 191 ~~~aL-----------------------------------------------------------------~g~~i~~--- 202 (394)
+++|| +|+.|++
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 261 (528)
T 3u4j_A 182 VPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA 261 (528)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999 6777764
Q ss_pred -hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------
Q psy3652 203 -RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------- 255 (394)
Q Consensus 203 -~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 262 ~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 341 (528)
T 3u4j_A 262 RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERT 341 (528)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTC
T ss_pred hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 56899999999999999999999999999999999999999999999999999
Q ss_pred ----------------------------cC-----CC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652 256 ----------------------------KI-----DR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT 301 (394)
Q Consensus 256 ----------------------------~~-----~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~ 301 (394)
.. .. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 342 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 421 (528)
T 3u4j_A 342 KIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVA 421 (528)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred ccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHH
Confidence 00 01 689999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++|+++|||++||||+|.+++++++ .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 422 ~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 498 (528)
T 3u4j_A 422 LANATEFGLSASVWSTNLETALQTI--RRIRAGRCWINSVI-DGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTL 498 (528)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCS-CCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEES
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHH--HhCCeeEEEECCCC-CCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeC
Confidence 9999999999999999999999999 88999999999875 34678999999999999999999999999999999987
Q ss_pred CC
Q psy3652 382 GK 383 (394)
Q Consensus 382 ~~ 383 (394)
+.
T Consensus 499 ~~ 500 (528)
T 3u4j_A 499 GR 500 (528)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=3.1e-77 Score=609.83 Aligned_cols=345 Identities=28% Similarity=0.482 Sum_probs=317.9
Q ss_pred CCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH-----HhhcCChhhHHHHHHHHHHHH
Q psy3652 35 VNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-----AWAALPAPRRGEIVRQIGDAL 107 (394)
Q Consensus 35 ~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~-----~w~~~~~~~R~~~L~~~a~~l 107 (394)
...++||||+|+ .++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 356799999997 3578999999999999999999999999999999999999 999999999999999999999
Q ss_pred hhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCccc-C--CCCCCceeEeeeccceeEEEEccCCchh
Q psy3652 108 RHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSIL-P--SERPGHVLLENWNPLGVVGIISAFNFPV 184 (394)
Q Consensus 108 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVV~~I~p~N~P~ 184 (394)
++++++|++++++|+|||..+++.|+..+++.++|++++++++.+... + ....+...++.++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPM 165 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHH
Confidence 999999999999999999999999999999999999999887655431 1 1123456788999999999999999999
Q ss_pred HhHHHHHHHHh-----------------------------------------------------------------hHHH
Q psy3652 185 AVYGWNAAIAL-----------------------------------------------------------------VGVA 199 (394)
Q Consensus 185 ~~~~~~~~~aL-----------------------------------------------------------------~g~~ 199 (394)
.+.++++++|| +|+.
T Consensus 166 ~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~ 245 (503)
T 3iwj_A 166 LMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSK 245 (503)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHH
Confidence 99999999999 6777
Q ss_pred HHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------
Q psy3652 200 VQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------- 255 (394)
Q Consensus 200 i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------- 255 (394)
|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 246 i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 325 (503)
T 3iwj_A 246 IMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISD 325 (503)
T ss_dssp HHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 765 56799999999999999999999999999999999999999999999999999
Q ss_pred ---------------------------------------cCC--CCCceecCeEEEcCCCCCcccccccccceEEEEeeC
Q psy3652 256 ---------------------------------------KID--RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD 294 (394)
Q Consensus 256 ---------------------------------------~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 294 (394)
..+ ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 405 (503)
T 3iwj_A 326 PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFS 405 (503)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeC
Confidence 001 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhe
Q psy3652 295 SLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374 (394)
Q Consensus 295 ~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~ 374 (394)
|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.
T Consensus 406 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~-~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 406 TEEEAIDLANDTVYGLGAAVISNDLERCERVT--KAFKAGIVWVNCSQ-PCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp SHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSSC-CCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcceEEEcCCC-CCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999 88999999999864 4567899999999999999999999999999
Q ss_pred eEEEEecC
Q psy3652 375 STVTINHG 382 (394)
Q Consensus 375 k~v~~~~~ 382 (394)
|+|+++..
T Consensus 483 k~v~~~~~ 490 (503)
T 3iwj_A 483 KQVTQYIS 490 (503)
T ss_dssp EEEEEECC
T ss_pred EEEEEeCC
Confidence 99999864
No 12
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.4e-77 Score=605.59 Aligned_cols=342 Identities=29% Similarity=0.489 Sum_probs=317.7
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999973 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
|++++++|+|||..+++.|+..+++.++|+++...+..+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776655554344567788999999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~----~~ 204 (394)
|| +|+.|++ ++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99 6777765 45
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652 256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305 (394)
Q Consensus 256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~ 305 (394)
..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 408 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhc
Confidence 00234799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
++|||++||||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|++++++|++.|+|++.
T Consensus 409 ~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 409 TEFGLAAYFYARDLSRVFRVG--EALEYGIVGINTGII-SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp SSCCSEEEEECCBHHHHHHHH--HHCCCSEEEESCSCC-CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCCceEEEECCCHHHHHHHH--HhCCeeeEEECCCCC-CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999 889999999998653 567899999999999999999999999999999875
No 13
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.7e-78 Score=616.00 Aligned_cols=348 Identities=24% Similarity=0.381 Sum_probs=320.1
Q ss_pred CCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 35 VNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 35 ~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus 25 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (521)
T 4e4g_A 25 YELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMN 104 (521)
T ss_dssp EEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999973 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
+|++++++|+|||..+++.|+..+++.++|+++..+++.+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 105 ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 184 (521)
T 4e4g_A 105 ELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFA 184 (521)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999988777665433222345678899999999999999999999999999
Q ss_pred HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652 193 IAL----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 193 ~aL----------------------------------------------------------------~g~~i~~----~~ 204 (394)
+|| +|+.|++ ++
T Consensus 185 ~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l 264 (521)
T 4e4g_A 185 PAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264 (521)
T ss_dssp HHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999 7777765 46
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 265 kpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~ 344 (521)
T 4e4g_A 265 KRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADM 344 (521)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSB
T ss_pred CCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCcc
Confidence 899999999999999999999999999999999999999999999999997
Q ss_pred -------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652 256 -------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300 (394)
Q Consensus 256 -------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi 300 (394)
.. +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 424 (521)
T 4e4g_A 345 GPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEAL 424 (521)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHH
Confidence 00 1358999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEE
Q psy3652 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVT 378 (394)
Q Consensus 301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~ 378 (394)
+++|+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+| +++|++++++|++.|+|+
T Consensus 425 ~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~ 502 (521)
T 4e4g_A 425 SLPMKHEYGNGVAIYTRDGDAARDFA--SRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTIT 502 (521)
T ss_dssp HHHHHSSEESEEEEECSBHHHHHHHH--HHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEE
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHH--HhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEE
Confidence 99999999999999999999999999 88999999999876555577999999999999 799999999999999999
Q ss_pred EecCCc
Q psy3652 379 INHGKE 384 (394)
Q Consensus 379 ~~~~~~ 384 (394)
++++..
T Consensus 503 ~~~~~~ 508 (521)
T 4e4g_A 503 SRWPSG 508 (521)
T ss_dssp ECCCCC
T ss_pred EecCcc
Confidence 987543
No 14
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.1e-77 Score=607.89 Aligned_cols=338 Identities=26% Similarity=0.427 Sum_probs=307.3
Q ss_pred ceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHH
Q psy3652 39 VYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLV 118 (394)
Q Consensus 39 ~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 118 (394)
+||||+|+.+++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999986667 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---
Q psy3652 119 SLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--- 195 (394)
Q Consensus 119 ~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--- 195 (394)
++|+|||..+++.|+..+++.++|+++.++++.+...+.. +...++.++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999988776655432 56678899999999999999999999999999999
Q ss_pred ------------------------------------------------------------------hHHHHHhh--hhhh
Q psy3652 196 ------------------------------------------------------------------VGVAVQSR--FGKL 207 (394)
Q Consensus 196 ------------------------------------------------------------------~g~~i~~~--~~~~ 207 (394)
+|+.|++. +||+
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa~~~v 238 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFKKI 238 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCCSSEE
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcCCCce
Confidence 77888763 6899
Q ss_pred ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------
Q psy3652 208 LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------- 255 (394)
Q Consensus 208 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------- 255 (394)
++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 239 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 318 (486)
T 3pqa_A 239 ALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLI 318 (486)
T ss_dssp EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCS
T ss_pred eeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999
Q ss_pred ----------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcE
Q psy3652 256 ----------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLS 311 (394)
Q Consensus 256 ----------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLs 311 (394)
.. ...|+|++|||+ +++++|++++||+||||++|++|+| ||||+++|+++|||+
T Consensus 319 ~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~ 396 (486)
T 3pqa_A 319 SVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLH 396 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSE
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcE
Confidence 00 124789999999 9999999999999999999999999 999999999999999
Q ss_pred EEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCC
Q psy3652 312 SSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGK 383 (394)
Q Consensus 312 a~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~ 383 (394)
+||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|+++...
T Consensus 397 a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~~ 466 (486)
T 3pqa_A 397 SAIFTNDINKSLKFA--ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466 (486)
T ss_dssp EEEECSBHHHHHHHH--HHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC--
T ss_pred EEEECCCHHHHHHHH--HhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCCc
Confidence 999999999999999 8899999999987543345899999999999999999999999999999998654
No 15
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-76 Score=607.17 Aligned_cols=347 Identities=24% Similarity=0.422 Sum_probs=319.4
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999983 567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
|++++++|+|||..+++.|+..+++.++|++++++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999988877765443234556688999999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHh----hh
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~----~~ 204 (394)
|| +|+.|++ ++
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l 265 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHL 265 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGT
T ss_pred HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcC
Confidence 99 7777765 56
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 266 ~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 345 (515)
T 2d4e_A 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVG 345 (515)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBC
T ss_pred CceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccC
Confidence 899999999999999999999999999999999999999999999999998
Q ss_pred -----------------------------cCCC---------CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHH
Q psy3652 256 -----------------------------KIDR---------PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLD 297 (394)
Q Consensus 256 -----------------------------~~~~---------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 297 (394)
.... .|+|++|||+.+ +++|++++||+||||++|++|+|+|
T Consensus 346 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~d 424 (515)
T 2d4e_A 346 PLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEE 424 (515)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHH
Confidence 0011 489999999999 9999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEE
Q psy3652 298 EAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTV 377 (394)
Q Consensus 298 eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v 377 (394)
|||+++|+++|||++||||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|
T Consensus 425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v 501 (515)
T 2d4e_A 425 EALRKANDTKYGLAAYVFTRDLERAHRLA--LELEAGMVYLNSHNV-RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTI 501 (515)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESSSCC-CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhCceeEE
Confidence 99999999999999999999999999999 889999999998643 557899999999999999999999999999999
Q ss_pred EEecCCccc
Q psy3652 378 TINHGKEIT 386 (394)
Q Consensus 378 ~~~~~~~~~ 386 (394)
+++++...|
T Consensus 502 ~~~~~~~~~ 510 (515)
T 2d4e_A 502 ALPLRPPHV 510 (515)
T ss_dssp EEESSCCCC
T ss_pred EEcCCCCCC
Confidence 998755444
No 16
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=4.5e-77 Score=612.04 Aligned_cols=346 Identities=24% Similarity=0.394 Sum_probs=319.3
Q ss_pred CCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 35 VNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 35 ~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
...++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++
T Consensus 36 ~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 36 KEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp EEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999988888999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHh-hhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL-SRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||..+++.|+..+++.++|+++. .+.+.+...+.. .+...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 194 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV 194 (538)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999998 566666655432 356678899999999999999999999999999
Q ss_pred HHh-----------------------------------------------------------------hHHHHHh----h
Q psy3652 193 IAL-----------------------------------------------------------------VGVAVQS----R 203 (394)
Q Consensus 193 ~aL-----------------------------------------------------------------~g~~i~~----~ 203 (394)
+|| +|+.|++ +
T Consensus 195 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 274 (538)
T 3qan_A 195 APIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVV 274 (538)
T ss_dssp HHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 999 7787765 3
Q ss_pred ------hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------c-
Q psy3652 204 ------FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------K- 256 (394)
Q Consensus 204 ------~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------~- 256 (394)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ .
T Consensus 275 ~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 354 (538)
T 3qan_A 275 RPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPT 354 (538)
T ss_dssp CTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTT
T ss_pred cccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCCCC
Confidence 7899999999999999999999999999999999999999999999999999 0
Q ss_pred -------------------------------------CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 257 -------------------------------------IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 257 -------------------------------------~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
.+..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 355 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deA 434 (538)
T 3qan_A 355 NRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHA 434 (538)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHH
Confidence 0015899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEc-CCCCCCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVN-IPTNGAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTV 377 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN-~~~~~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v 377 (394)
|+++|+++|||++||||+|.+++++++ .++++|+|+|| .++....+.+||||+|.||+| +++|.+++++|++.|+|
T Consensus 435 i~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v 512 (538)
T 3qan_A 435 LEIANNTEYGLTGAVITRNRAHIEQAK--REFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512 (538)
T ss_dssp HHHHHCSSEESEEEEECSCHHHHHHHH--HHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEE
T ss_pred HHHHhcCCCCcEEEEECCCHHHHHHHH--HhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEE
Confidence 999999999999999999999999999 88999999999 554444778999999999999 99999999999999999
Q ss_pred EEecCC
Q psy3652 378 TINHGK 383 (394)
Q Consensus 378 ~~~~~~ 383 (394)
+++...
T Consensus 513 ~~~~~~ 518 (538)
T 3qan_A 513 SEMYAE 518 (538)
T ss_dssp EEEC--
T ss_pred EEecCC
Confidence 998754
No 17
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.3e-76 Score=602.50 Aligned_cols=344 Identities=30% Similarity=0.498 Sum_probs=317.4
Q ss_pred CCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652 34 SVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKL 111 (394)
Q Consensus 34 ~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (394)
+...++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 4 PVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp CEECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 44567899999983 5678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHH
Q psy3652 112 VPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNA 191 (394)
Q Consensus 112 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~ 191 (394)
++|++++++|+|||..+++.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999888776654433345566889999999999999999999999999
Q ss_pred HHHh-----------------------------------------------------------------hHHHHHh----
Q psy3652 192 AIAL-----------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 192 ~~aL-----------------------------------------------------------------~g~~i~~---- 202 (394)
++|| +|+.|++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 9999 7777764
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------c----
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------K---- 256 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------~---- 256 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ .
T Consensus 244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 323 (479)
T 2imp_A 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDI 323 (479)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSC
T ss_pred cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCC
Confidence 56899999999999999999999999999999999999999999999999998 0
Q ss_pred -----------------------------C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHH
Q psy3652 257 -----------------------------I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITW 302 (394)
Q Consensus 257 -----------------------------~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~ 302 (394)
. +..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 324 ~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~ 403 (479)
T 2imp_A 324 AMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISM 403 (479)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHH
Confidence 0 013889999999999999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 303 NNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 303 ~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
+|+++|||++||||+|.+++++++ .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 404 aN~~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 404 ANDSDYGLTSSIYTQNLNVAMKAI--KGLKFGETYINRENFE-AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHCSSEESEEEEECCCHHHHHHHH--HHCCSSEEEESSCCCC-CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCCeeEEEECCCHHHHHHHH--HhCCEeEEEECCCCCC-CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999 8899999999986544 57899999999999999999999999999999875
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3e-77 Score=610.63 Aligned_cols=343 Identities=28% Similarity=0.461 Sum_probs=318.6
Q ss_pred CCCCCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652 33 GSVNPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK 110 (394)
Q Consensus 33 ~~~~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (394)
|....++||||+|+ .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 45567899999997 4678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhh----ccCcccCCCCCCceeEeeeccceeEEEEccCCchhHh
Q psy3652 111 LVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRT----YSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 186 (394)
Q Consensus 111 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~ 186 (394)
+++|++++++|+|||..++ |+..+++.++|+++++++ +.++..+. .++. .++.++|+|||++|+|||||+.+
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 999999999999999887 66665543 2345 78899999999999999999999
Q ss_pred HHHHHHHHh----------------------------------------------------------------hHHHHHh
Q psy3652 187 YGWNAAIAL----------------------------------------------------------------VGVAVQS 202 (394)
Q Consensus 187 ~~~~~~~aL----------------------------------------------------------------~g~~i~~ 202 (394)
.++++++|| +|+.|++
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 246 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAA 246 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHH
Confidence 999999999 6777765
Q ss_pred ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652 203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------- 255 (394)
Q Consensus 203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 247 ~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 326 (517)
T 3r31_A 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLD 326 (517)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 56899999999999999999999999999999999999999999999999999
Q ss_pred ----------------------------------c--CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCH
Q psy3652 256 ----------------------------------K--ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSL 296 (394)
Q Consensus 256 ----------------------------------~--~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 296 (394)
. .+ ..|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 327 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 406 (517)
T 3r31_A 327 YATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDE 406 (517)
T ss_dssp TTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCH
T ss_pred cCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 0 00 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652 297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376 (394)
Q Consensus 297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~ 376 (394)
||||+++|+++|||++||||+|.+++++++ .++++|+|+||+.+ ...+.+||||+|.||+|+++|++++++|++.|+
T Consensus 407 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~ 483 (517)
T 3r31_A 407 DEVLARANATEFGLAGGVFTADLARAHRVV--DGLEAGTLWINTYN-LCPVEIPFGGSKQSGFGRENSAAALEHYSELKT 483 (517)
T ss_dssp HHHHHHHHCSSEESEEEEECSCHHHHHHHH--HHSCCSEEEESSCC-CCCTTSCBCCEETTEECCBSTGGGGGGSEEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHH--HHCCcceEEECCCC-CCCCCCCcCCcCcCCCCcCchHHHHHHhhceEE
Confidence 999999999999999999999999999999 88999999999864 456789999999999999999999999999999
Q ss_pred EEEecC
Q psy3652 377 VTINHG 382 (394)
Q Consensus 377 v~~~~~ 382 (394)
|+++..
T Consensus 484 v~~~~~ 489 (517)
T 3r31_A 484 VYVSTG 489 (517)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999864
No 19
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=6.4e-77 Score=608.20 Aligned_cols=343 Identities=26% Similarity=0.516 Sum_probs=315.3
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKL 111 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (394)
+.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++++
T Consensus 36 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 115 (517)
T 2o2p_A 36 PYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQ 115 (517)
T ss_dssp CCSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 356899999983 467899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCC---CCCceeEeeeccceeEEEEccCCchhHhH
Q psy3652 112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSE---RPGHVLLENWNPLGVVGIISAFNFPVAVY 187 (394)
Q Consensus 112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~ 187 (394)
++|++++++|+|||+.+++ .|+..+++.++|++++++++.+...+.. .++...++.++|+|||++|+|||||+.+.
T Consensus 116 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 195 (517)
T 2o2p_A 116 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195 (517)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHH
Confidence 9999999999999999997 8999999999999999988776554432 22335678999999999999999999999
Q ss_pred HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652 188 GWNAAIAL-----------------------------------------------------------------VGVAVQS 202 (394)
Q Consensus 188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~ 202 (394)
++++++|| +|+.|++
T Consensus 196 ~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~ 275 (517)
T 2o2p_A 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMK 275 (517)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 99999999 6777754
Q ss_pred -----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------------
Q psy3652 203 -----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------------- 255 (394)
Q Consensus 203 -----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 276 ~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~ 355 (517)
T 2o2p_A 276 SCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355 (517)
T ss_dssp HHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTT
T ss_pred HhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999
Q ss_pred -------------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCC--H
Q psy3652 256 -------------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDS--L 296 (394)
Q Consensus 256 -------------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~ 296 (394)
..+..|+|++|||+.+++++|++++||+||||++|++|+| +
T Consensus 356 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~ 435 (517)
T 2o2p_A 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDV 435 (517)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCH
Confidence 0012489999999999999999999999999999999999 9
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652 297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376 (394)
Q Consensus 297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~ 376 (394)
||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 436 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~-~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~ 512 (517)
T 2o2p_A 436 DAVLSRANATEFGLASGVFTRDINKALYVS--DKLQAGTVFINTYN-KTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKT 512 (517)
T ss_dssp HHHHHHHTCSSCCSCCEEECSBHHHHHHHH--HHCCSSEEEESCSS-CCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhcCCCCceEEEeCCCHHHHHHHH--HhcCEeEEEECCCC-CCCCCCCcCCcCcCCcCccChHHHHHHhCCceE
Confidence 999999999999999999999999999999 88999999999864 345689999999999999999999999999999
Q ss_pred EEEec
Q psy3652 377 VTINH 381 (394)
Q Consensus 377 v~~~~ 381 (394)
|++++
T Consensus 513 v~~~~ 517 (517)
T 2o2p_A 513 VTFEY 517 (517)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 98763
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.2e-76 Score=603.72 Aligned_cols=341 Identities=27% Similarity=0.468 Sum_probs=314.3
Q ss_pred CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652 37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115 (394)
Q Consensus 37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 115 (394)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus 24 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 103 (495)
T 1wnd_A 24 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA 103 (495)
T ss_dssp CCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999983 33789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652 116 QLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194 (394)
Q Consensus 116 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a 194 (394)
+++++|+|||..+++. |+..+++.++|+++.++++.++..+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 104 ~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 183 (495)
T 1wnd_A 104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 183 (495)
T ss_dssp HHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHH
Confidence 9999999999999987 999999999999999888766544432234456788999999999999999999999999999
Q ss_pred h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652 195 L----------------------------------------------------------------VGVAVQS----RFGK 206 (394)
Q Consensus 195 L----------------------------------------------------------------~g~~i~~----~~~~ 206 (394)
| +|+.|++ ++||
T Consensus 184 LaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~~l~~ 263 (495)
T 1wnd_A 184 LAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 263 (495)
T ss_dssp HHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGGTCE
T ss_pred HHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 9 7777765 4689
Q ss_pred hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------- 255 (394)
Q Consensus 207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------- 255 (394)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 264 v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpl 343 (495)
T 1wnd_A 264 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPL 343 (495)
T ss_dssp EEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCC
T ss_pred cccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred -------------------c-C----C-C----CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652 256 -------------------K-I----D-R----PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV 306 (394)
Q Consensus 256 -------------------~-~----~-~----~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~ 306 (394)
. . . . .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 344 i~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 423 (495)
T 1wnd_A 344 SSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS 423 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC
Confidence 0 0 0 1 37899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
+|||+++|||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 424 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 424 QYGLASSVWTKDVGRAHRVS--ARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp SCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred CCCeeEEEECCCHHHHHHHH--HhCCcceEEECCCCC-CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 99999999999999999999 889999999998643 457899999999999999999999999999999875
No 21
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.7e-76 Score=605.11 Aligned_cols=351 Identities=26% Similarity=0.382 Sum_probs=306.4
Q ss_pred CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+ .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 56799999998 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||..+++.|+..+++.++|+++..+++.+ ..+.. .++...++.++|+|||++|+|||||+.+.+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999998887666 43322 3456678899999999999999999999999999
Q ss_pred HHh------------------------------------------------------------------hHHHHHh----
Q psy3652 193 IAL------------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 193 ~aL------------------------------------------------------------------~g~~i~~---- 202 (394)
+|| +|+.|++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999 7777765
Q ss_pred --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652 203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------- 255 (394)
Q Consensus 203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 251 ~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 330 (508)
T 3r64_A 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330 (508)
T ss_dssp SSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSS
T ss_pred ccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCC
Confidence 56899999999999999999999999999999999999999999999999998
Q ss_pred -----------------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHh
Q psy3652 256 -----------------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNN 304 (394)
Q Consensus 256 -----------------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n 304 (394)
.. ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 331 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 410 (508)
T 3r64_A 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELAN 410 (508)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHh
Confidence 00 11488999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCc
Q psy3652 305 EVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKE 384 (394)
Q Consensus 305 ~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~ 384 (394)
+++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|++++...
T Consensus 411 ~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~~~~ 488 (508)
T 3r64_A 411 ASDFGLSAAVWSKDIDRAAQFA--LQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKRSAE 488 (508)
T ss_dssp SSSCCSCEEEECSCHHHHHHHH--TTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEECCST
T ss_pred CCCCCcEEEEEcCCHHHHHHHH--HhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEecccc
Confidence 9999999999999999999999 88999999999976445678999999999999999999999999999999998765
Q ss_pred ccccc
Q psy3652 385 ITLAQ 389 (394)
Q Consensus 385 ~~~~~ 389 (394)
.+..+
T Consensus 489 ~~~~~ 493 (508)
T 3r64_A 489 NLYFQ 493 (508)
T ss_dssp TCCCC
T ss_pred hhcch
Confidence 55433
No 22
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.2e-76 Score=605.19 Aligned_cols=342 Identities=26% Similarity=0.473 Sum_probs=316.2
Q ss_pred CCCceeCCeecc--CCCe-eeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 36 NPGVYDGTSWKA--NGEI-IPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~-~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
..++||||+|+. ++.+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 98 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456899999973 4567 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
+|++++++|+|||..+++.|+..+++.++|+++.++++.++..+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus 99 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 177 (503)
T 1a4s_A 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999988766544332 334567889999999999999999999999999
Q ss_pred HHh----------------------------------------------------------------hHHHHHh----hh
Q psy3652 193 IAL----------------------------------------------------------------VGVAVQS----RF 204 (394)
Q Consensus 193 ~aL----------------------------------------------------------------~g~~i~~----~~ 204 (394)
+|| +|+.|++ ++
T Consensus 178 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~ 257 (503)
T 1a4s_A 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 999 6777764 47
Q ss_pred hhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------
Q psy3652 205 GKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------- 255 (394)
Q Consensus 205 ~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------- 255 (394)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 258 ~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 337 (503)
T 1a4s_A 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG 337 (503)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccC
Confidence 899999999999999999999999999999999999999999999999999
Q ss_pred -----------------------------cCC-------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 256 -----------------------------KID-------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 256 -----------------------------~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 417 (503)
T 1a4s_A 338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417 (503)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHH
Confidence 001 24899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~ 379 (394)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 418 i~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 418 LQRANNTTFGLASGVFTRDISRAHRVA--ANLEAGTCYINTYSI-SPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCSSEEEESCCCC-CCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHH--HHCceeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 999999999999999999999999999 889999999998654 45679999999999999999999999999999998
Q ss_pred ec
Q psy3652 380 NH 381 (394)
Q Consensus 380 ~~ 381 (394)
++
T Consensus 495 ~~ 496 (503)
T 1a4s_A 495 EM 496 (503)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 23
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.6e-76 Score=601.45 Aligned_cols=345 Identities=26% Similarity=0.377 Sum_probs=296.6
Q ss_pred CCCceeCCeec--cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWK--ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~--~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+ .++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDD 85 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999998 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC-CCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE-RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||..+++.|+..+++.++|+++..+++.+...+.. .++...++.++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 165 (485)
T 4dng_A 86 IIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIA 165 (485)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999988777655432 3456678899999999999999999999999999
Q ss_pred HHh------------------------------------------------------------------hHHHHHh----
Q psy3652 193 IAL------------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 193 ~aL------------------------------------------------------------------~g~~i~~---- 202 (394)
+|| +|+.|++
T Consensus 166 ~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~ 245 (485)
T 4dng_A 166 PAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245 (485)
T ss_dssp HHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhh
Confidence 999 6777765
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 246 ~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~ 325 (485)
T 4dng_A 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTV 325 (485)
T ss_dssp HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCc
Confidence 56899999999999999999999999999999999999999999999999998
Q ss_pred ---------------------------cC--CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652 256 ---------------------------KI--DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV 306 (394)
Q Consensus 256 ---------------------------~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~ 306 (394)
.. ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 326 ~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~ 405 (485)
T 4dng_A 326 VGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDT 405 (485)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCC
Confidence 00 1147899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652 307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
+|||+++|||+|.+++++++ .++++|+|+||+++....+.+||||+|.||+|+++|.+++++|++.|+|++++.
T Consensus 406 ~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~~ 479 (485)
T 4dng_A 406 EYGLSSAVFTSDLEKGEKFA--LQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQ 479 (485)
T ss_dssp SCCSEEEEECSCHHHHHHHH--TTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC-
T ss_pred CCCceEEEECCCHHHHHHHH--HhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEecC
Confidence 99999999999999999999 889999999998764456789999999999999999999999999999999864
No 24
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.3e-76 Score=600.15 Aligned_cols=346 Identities=26% Similarity=0.418 Sum_probs=316.9
Q ss_pred CCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 33 GSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 33 ~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
|++..++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|+++++
T Consensus 1 ~~~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 1 MTKQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp -CCBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45566799999998433399999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCC----cee-EeeeccceeEEEEccCCchhHhH
Q psy3652 113 PLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPG----HVL-LENWNPLGVVGIISAFNFPVAVY 187 (394)
Q Consensus 113 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVV~~I~p~N~P~~~~ 187 (394)
+|++++++|+|||..+++.|+..+++.++|+++.++++.++..+...++ ... ++.++|+|||++|+|||||+.+.
T Consensus 81 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 160 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 160 (475)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHH
Confidence 9999999999999999999999999999999999887766543322233 345 78999999999999999999999
Q ss_pred HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652 188 GWNAAIAL-----------------------------------------------------------------VGVAVQS 202 (394)
Q Consensus 188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~ 202 (394)
++++++|| +|+.|++
T Consensus 161 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 240 (475)
T 1euh_A 161 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 240 (475)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHH
Confidence 99999999 7788876
Q ss_pred h--hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652 203 R--FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------- 255 (394)
Q Consensus 203 ~--~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------- 255 (394)
. +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 241 ~aa~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (475)
T 1euh_A 241 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDA 320 (475)
T ss_dssp HTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTC
T ss_pred hcCCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccccC
Confidence 4 6899999999999999999999999999999999999999999999999998
Q ss_pred ----------------------------cCCC--CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652 256 ----------------------------KIDR--PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305 (394)
Q Consensus 256 ----------------------------~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~ 305 (394)
.... .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~ 400 (475)
T 1euh_A 321 DITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNK 400 (475)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhC
Confidence 0001 3899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcC-CCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNI-PTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~-~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++|||+++|||+|.+++++++ .++++|.|+||+ ++. ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 401 ~~~gL~a~v~t~d~~~~~~~~--~~l~~G~v~vN~~~~~-~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 401 SEYGLQASIFTNDFPRAFGIA--EQLEVGTVHINNKTQR-GTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474 (475)
T ss_dssp SSEESEEEEECSCHHHHHHHH--HHSCSSEEEESSCCCC-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCeeEEEEeCCHHHHHHHH--HhCCEeeEEECCCCCC-CCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEec
Confidence 999999999999999999999 889999999998 543 3678999999999999999999999999999998763
No 25
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3e-76 Score=601.00 Aligned_cols=340 Identities=25% Similarity=0.411 Sum_probs=309.1
Q ss_pred CCCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhh
Q psy3652 32 SGSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRH 109 (394)
Q Consensus 32 ~~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 109 (394)
.|....++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++
T Consensus 21 ~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (497)
T 3i44_A 21 SMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEK 100 (497)
T ss_dssp -CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 3344678999999973 56789999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEee-eccceeEEEEccCCchhHhH
Q psy3652 110 KLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLEN-WNPLGVVGIISAFNFPVAVY 187 (394)
Q Consensus 110 ~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVV~~I~p~N~P~~~~ 187 (394)
++++|++++++|+|||..+++ .|+..+++.++++++.+.......... .+...++. ++|+|||++|+|||||+.+.
T Consensus 101 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 101 RSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHH
Confidence 999999999999999999998 899999999999998876643322211 13335667 99999999999999999999
Q ss_pred HHHHHHHh-----------------------------------------------------------------hHHHHHh
Q psy3652 188 GWNAAIAL-----------------------------------------------------------------VGVAVQS 202 (394)
Q Consensus 188 ~~~~~~aL-----------------------------------------------------------------~g~~i~~ 202 (394)
++++++|| +|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~ 258 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK 258 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999 6777765
Q ss_pred ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652 203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------- 255 (394)
Q Consensus 203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------- 255 (394)
++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||++
T Consensus 259 ~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~ 337 (497)
T 3i44_A 259 NASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQ 337 (497)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred HHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 5689999999999999999999 999999999999999999999999999999
Q ss_pred -------------------------------cCC--------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCH
Q psy3652 256 -------------------------------KID--------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSL 296 (394)
Q Consensus 256 -------------------------------~~~--------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 296 (394)
... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 417 (497)
T 3i44_A 338 TGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTE 417 (497)
T ss_dssp CSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCH
Confidence 000 15899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeE
Q psy3652 297 DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRST 376 (394)
Q Consensus 297 ~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~ 376 (394)
||||+++|+++|||++||||+|.+++++++ .++++|+|+||. ....+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 418 deAi~~aN~~~~GL~a~v~t~d~~~a~~~a--~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~ 493 (497)
T 3i44_A 418 DEAVTLANDTEYGLTNYIQSQDRSKCRRIA--AQVRSGMVEVNG--HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKA 493 (497)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEETT--CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeE
Confidence 999999999999999999999999999999 889999999994 3455789999999999999999999999999998
Q ss_pred EE
Q psy3652 377 VT 378 (394)
Q Consensus 377 v~ 378 (394)
|+
T Consensus 494 v~ 495 (497)
T 3i44_A 494 IS 495 (497)
T ss_dssp ES
T ss_pred EE
Confidence 74
No 26
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=7.3e-76 Score=598.71 Aligned_cols=342 Identities=28% Similarity=0.535 Sum_probs=315.3
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH---HhhcCChhhHHHHHHHHHHHHhhC
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA---AWAALPAPRRGEIVRQIGDALRHK 110 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 110 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|+++
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 446899999983 467899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652 111 LVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW 189 (394)
Q Consensus 111 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~ 189 (394)
+++|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999874 799999999999999998887665443 2345567899999999999999999999999
Q ss_pred HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652 190 NAAIAL-----------------------------------------------------------------VGVAVQS-- 202 (394)
Q Consensus 190 ~~~~aL-----------------------------------------------------------------~g~~i~~-- 202 (394)
++++|| +|+.|++
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~a 258 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 258 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 999999 7777764
Q ss_pred ---hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------
Q psy3652 203 ---RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------ 255 (394)
Q Consensus 203 ---~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------ 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 259 a~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 338 (501)
T 1bxs_A 259 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 338 (501)
T ss_dssp HHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTST
T ss_pred hhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCccc
Confidence 46899999999999999999999999999999999999999999999999998
Q ss_pred -----------------------------cC------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652 256 -----------------------------KI------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300 (394)
Q Consensus 256 -----------------------------~~------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi 300 (394)
.+ +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 339 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 418 (501)
T 1bxs_A 339 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVI 418 (501)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHH
Confidence 00 1248999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
+++|+++|||++||||+|.+++++++ .++++|+|+||+++. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 419 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 419 KRANNTFYGLSAGIFTNDIDKAITVS--SALQSGTVWVNCYSV-VSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEEcCCHHHHHHHH--HhcCeeEEEECCCCC-CCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 99999999999999999999999999 889999999998643 456799999999999999999999999999999987
Q ss_pred c
Q psy3652 381 H 381 (394)
Q Consensus 381 ~ 381 (394)
+
T Consensus 496 ~ 496 (501)
T 1bxs_A 496 I 496 (501)
T ss_dssp C
T ss_pred c
Confidence 5
No 27
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-76 Score=603.39 Aligned_cols=344 Identities=26% Similarity=0.423 Sum_probs=317.2
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH--HhhcCChhhHHHHHHHHHHHHhhCH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA--AWAALPAPRRGEIVRQIGDALRHKL 111 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999983 467899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHH
Q psy3652 112 VPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWN 190 (394)
Q Consensus 112 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 190 (394)
++|++++++|+|||..+++ .|+..+++.++|+++.++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999997 8999999999999999988877654322 2345678999999999999999999999999
Q ss_pred HHHHh----------------------------------------------------------------hHHHHHh----
Q psy3652 191 AAIAL----------------------------------------------------------------VGVAVQS---- 202 (394)
Q Consensus 191 ~~~aL----------------------------------------------------------------~g~~i~~---- 202 (394)
+++|| +|+.|++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999 6777765
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 46899999999999999999999999999999999999999999999999999
Q ss_pred --------------------------c-----CC---CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652 256 --------------------------K-----ID---RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT 301 (394)
Q Consensus 256 --------------------------~-----~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~ 301 (394)
. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 0 01 1489999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++|+++|||++||||+|.+++++++ .++++|+|+||+++ ..+.+||||+|.||+|+++|.+++++|++.|+|++++
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKIS--QQIRTGTYGINWYA--FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHH--HHSCCSCCEESSCC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHH--HhCCEeEEEECCCC--CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 9999999999999999999999999 88999999999864 5678999999999999999999999999999999876
Q ss_pred CCc
Q psy3652 382 GKE 384 (394)
Q Consensus 382 ~~~ 384 (394)
+.+
T Consensus 483 ~~~ 485 (495)
T 3b4w_A 483 GYT 485 (495)
T ss_dssp TCC
T ss_pred Ccc
Confidence 443
No 28
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=6.5e-76 Score=599.23 Aligned_cols=343 Identities=31% Similarity=0.529 Sum_probs=317.8
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++
T Consensus 6 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 85 (490)
T 2ve5_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 567999999973 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHH-HHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIG-EVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAA 192 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 192 (394)
|++++++|+|||..+++. |+..+++.++|+++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~ 164 (490)
T 2ve5_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeeEeeccccEEEEECCCcchHHHHHHHHH
Confidence 999999999999999986 99999999999999988876654433 2356678899999999999999999999999999
Q ss_pred HHh-----------------------------------------------------------------hHHHHHh-----
Q psy3652 193 IAL-----------------------------------------------------------------VGVAVQS----- 202 (394)
Q Consensus 193 ~aL-----------------------------------------------------------------~g~~i~~----- 202 (394)
+|| +|+.|++
T Consensus 165 ~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~~a~a~ 244 (490)
T 2ve5_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHHhchhc
Confidence 999 6777765
Q ss_pred hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------
Q psy3652 203 RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------- 255 (394)
Q Consensus 203 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------- 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 245 ~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~ 324 (490)
T 2ve5_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 35799999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------cC----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHH
Q psy3652 256 --------------------------------KI----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEA 299 (394)
Q Consensus 256 --------------------------------~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 299 (394)
.. ...|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deA 404 (490)
T 2ve5_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHH
Confidence 00 025899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEE
Q psy3652 300 ITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 300 i~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~ 379 (394)
|+++|+++|||+++|||+|.+++++++ .++++|+|+||+++ ...+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~-~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~v~~ 481 (490)
T 2ve5_A 405 IRRANDTEYGLAAGVVTQDLARAHRAI--HRLEAGICWINTWG-ESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHH--HHSCCSEEEESCCS-CCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHH--HhCCcceEEECCCC-CCCCCCCcCCCCCCCCCCcchHHHHHHhheeEEEEE
Confidence 999999999999999999999999999 88999999999864 345789999999999999999999999999999999
Q ss_pred ecC
Q psy3652 380 NHG 382 (394)
Q Consensus 380 ~~~ 382 (394)
+.+
T Consensus 482 ~~~ 484 (490)
T 2ve5_A 482 ELG 484 (490)
T ss_dssp ECS
T ss_pred ccC
Confidence 874
No 29
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=7.8e-76 Score=597.30 Aligned_cols=351 Identities=23% Similarity=0.406 Sum_probs=316.8
Q ss_pred hhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHH
Q psy3652 27 KELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDA 106 (394)
Q Consensus 27 ~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 106 (394)
..|+...++ .++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.
T Consensus 4 ~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 82 (487)
T 2w8n_A 4 AGLSAALLR-TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNL 82 (487)
T ss_dssp ----CCCCC-CSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred cccCccccc-cCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 334444333 6789999998443889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHh
Q psy3652 107 LRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 186 (394)
Q Consensus 107 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~ 186 (394)
|++++++|++++++|+|||..+++.|+..+++.++|+++.++++.++..+...++...++.++|+|||++|+|||||+.+
T Consensus 83 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 162 (487)
T 2w8n_A 83 MIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAM 162 (487)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHH
Confidence 99999999999999999999999999999999999999998887776544323455678899999999999999999999
Q ss_pred HHHHHHHHh--------------------------------------------------------------------hHH
Q psy3652 187 YGWNAAIAL--------------------------------------------------------------------VGV 198 (394)
Q Consensus 187 ~~~~~~~aL--------------------------------------------------------------------~g~ 198 (394)
.++++++|| +|+
T Consensus 163 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~ 242 (487)
T 2w8n_A 163 ITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGK 242 (487)
T ss_dssp HHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 999999999 566
Q ss_pred HHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------c-C--
Q psy3652 199 AVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------K-I-- 257 (394)
Q Consensus 199 ~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~-~-- 257 (394)
.|++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ . +
T Consensus 243 ~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~ 322 (487)
T 2w8n_A 243 ILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRV 322 (487)
T ss_dssp HHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhccc
Confidence 6654 46899999999999999999999999999999999999999999999999998 1 0
Q ss_pred ------------------------------------------CCCCc-eecCeEEEcCCCCCcccccccccceEEEEeeC
Q psy3652 258 ------------------------------------------DRPGY-FVEPTIVTGLPHNSRVVHRETFAPIVYVFPFD 294 (394)
Q Consensus 258 ------------------------------------------~~~g~-~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~ 294 (394)
...|+ |++|||+.+++++|++++||+||||++|++|+
T Consensus 323 G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 402 (487)
T 2w8n_A 323 GNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFD 402 (487)
T ss_dssp SCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEES
T ss_pred CCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeC
Confidence 01378 99999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhhe
Q psy3652 295 SLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRR 374 (394)
Q Consensus 295 ~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~ 374 (394)
|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||++... .+.+||||+|.||+|+++|.+++++|++.
T Consensus 403 ~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G~~~G~~~l~~f~~~ 479 (487)
T 2w8n_A 403 TEEEAIAIANAADVGLAGYFYSQDPAQIWRVA--EQLEVGMVGVNEGLIS-SVECPFGGVKQSGLGREGSKYGIDEYLEL 479 (487)
T ss_dssp CHHHHHHHHTCTTCCSEEEEECCCHHHHHHHH--HHSCSSEEEESCSCCC-CTTSCBCCSGGGEESCBSTTTGGGGGEEE
T ss_pred CHHHHHHHHhCCCCCceEEEeCCCHHHHHHHH--HhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcCCCchHHHHHHhcCc
Confidence 99999999999999999999999999999999 8899999999986543 46799999999999999999999999999
Q ss_pred eEEEEec
Q psy3652 375 STVTINH 381 (394)
Q Consensus 375 k~v~~~~ 381 (394)
|+|+++.
T Consensus 480 k~v~~~~ 486 (487)
T 2w8n_A 480 KYVCYGG 486 (487)
T ss_dssp EEEEECC
T ss_pred cEEEEec
Confidence 9998763
No 30
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=4.9e-76 Score=599.87 Aligned_cols=342 Identities=27% Similarity=0.516 Sum_probs=315.1
Q ss_pred CCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH---HhhcCChhhHHHHHHHHHHHHhhC
Q psy3652 36 NPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA---AWAALPAPRRGEIVRQIGDALRHK 110 (394)
Q Consensus 36 ~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 110 (394)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++++++|+++
T Consensus 19 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 98 (500)
T 1o04_A 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERD 98 (500)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHH
Confidence 345899999983 467899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652 111 LVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW 189 (394)
Q Consensus 111 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~ 189 (394)
+++|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. .++...++.++|+|||++|+|||||+.+.++
T Consensus 99 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 177 (500)
T 1o04_A 99 RTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAW 177 (500)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHH
Confidence 99999999999999999884 699999999999999988877654443 2345567899999999999999999999999
Q ss_pred HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652 190 NAAIAL-----------------------------------------------------------------VGVAVQS-- 202 (394)
Q Consensus 190 ~~~~aL-----------------------------------------------------------------~g~~i~~-- 202 (394)
++++|| +|+.|++
T Consensus 178 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 257 (500)
T 1o04_A 178 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAA 257 (500)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhh
Confidence 999999 7777764
Q ss_pred ---hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc------------------------
Q psy3652 203 ---RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------ 255 (394)
Q Consensus 203 ---~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------ 255 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 258 a~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 337 (500)
T 1o04_A 258 GSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDS 337 (500)
T ss_dssp HHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTST
T ss_pred hhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccc
Confidence 46899999999999999999999999999999999999999999999999998
Q ss_pred ------------------------------c----C-CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652 256 ------------------------------K----I-DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300 (394)
Q Consensus 256 ------------------------------~----~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi 300 (394)
. . +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 338 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 417 (500)
T 1o04_A 338 KTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVV 417 (500)
T ss_dssp TCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHH
T ss_pred cCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHH
Confidence 0 0 1248999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
+++|+++|||++||||+|.+++++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 418 ~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~ 494 (500)
T 1o04_A 418 GRANNSTYGLAAAVFTKDLDKANYLS--QALQAGTVWVNCYDV-FGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK 494 (500)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHH--HHCCSSEEEESCSSC-CCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred HHHhcCCCCceEEEECCCHHHHHHHH--HhCCeeEEEECCCCC-CCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999 889999999998643 456899999999999999999999999999999987
Q ss_pred c
Q psy3652 381 H 381 (394)
Q Consensus 381 ~ 381 (394)
+
T Consensus 495 ~ 495 (500)
T 1o04_A 495 V 495 (500)
T ss_dssp C
T ss_pred c
Confidence 5
No 31
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=2.9e-76 Score=602.08 Aligned_cols=357 Identities=25% Similarity=0.339 Sum_probs=323.8
Q ss_pred hhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH-HhhcCChhhHHHHHHH
Q psy3652 24 PFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYA-AWAALPAPRRGEIVRQ 102 (394)
Q Consensus 24 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~-~w~~~~~~~R~~~L~~ 102 (394)
-.+++.... + ..++||||+|+.+..+++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|++
T Consensus 8 ~~~~~~~~~-~-~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~ 85 (501)
T 1uxt_A 8 GVIKEKGGV-P-VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK 85 (501)
T ss_dssp TTSEEETTE-E-EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHhcCC-c-ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 367775544 3 557899999985447899999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCC--CC--CceeEeeeccceeEEEEc
Q psy3652 103 IGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSE--RP--GHVLLENWNPLGVVGIIS 178 (394)
Q Consensus 103 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVV~~I~ 178 (394)
++++|++++++|++++++|+|||..+++.|+..+++.++|+++.++++.++..+.. .. +...++.++|+|||++|+
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 165 (501)
T 1uxt_A 86 AADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAIT 165 (501)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEEC
Confidence 99999999999999999999999999999999999999999999888766654432 12 335678999999999999
Q ss_pred cCCchhHhHHHHHHHHh---------------------------------------------------------------
Q psy3652 179 AFNFPVAVYGWNAAIAL--------------------------------------------------------------- 195 (394)
Q Consensus 179 p~N~P~~~~~~~~~~aL--------------------------------------------------------------- 195 (394)
|||||+.+.++++++||
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~ 245 (501)
T 1uxt_A 166 PFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGST 245 (501)
T ss_dssp CTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcH
Confidence 99999999999999999
Q ss_pred -hHHHHHhh--hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------
Q psy3652 196 -VGVAVQSR--FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------- 255 (394)
Q Consensus 196 -~g~~i~~~--~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------- 255 (394)
+|+.|++. +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 246 ~~G~~i~~~aal~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 325 (501)
T 1uxt_A 246 EVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLR 325 (501)
T ss_dssp HHHHHHHHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhcc
Confidence 77888764 5899999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------------c-CCC--CC-ceecCeEEEcCC---CCCcccccccccceEEEEe
Q psy3652 256 ------------------------------------K-IDR--PG-YFVEPTIVTGLP---HNSRVVHRETFAPIVYVFP 292 (394)
Q Consensus 256 ------------------------------------~-~~~--~g-~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~ 292 (394)
. ... .| +|++|||+.+++ ++|++++||+||||++|++
T Consensus 326 ~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~ 405 (501)
T 1uxt_A 326 VGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE 405 (501)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred CCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence 0 001 37 999999999999 9999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhh
Q psy3652 293 FDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYC 372 (394)
Q Consensus 293 ~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~ 372 (394)
|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||++.+...+.+||||+|.||+|+++|.+++++|+
T Consensus 406 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~ 483 (501)
T 1uxt_A 406 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAV--RLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVT 483 (501)
T ss_dssp ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHH--HHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH--HhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhC
Confidence 9999999999999999999999999999999999 88999999999862345678999999999999999999999999
Q ss_pred heeEEEEecCCc
Q psy3652 373 RRSTVTINHGKE 384 (394)
Q Consensus 373 ~~k~v~~~~~~~ 384 (394)
+.|+|++++..+
T Consensus 484 ~~k~v~~~~~~~ 495 (501)
T 1uxt_A 484 AYKTIVFNYKGK 495 (501)
T ss_dssp EEEEEEEECTTS
T ss_pred ceeEEEEecCCC
Confidence 999999986443
No 32
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.7e-75 Score=594.32 Aligned_cols=343 Identities=26% Similarity=0.446 Sum_probs=314.6
Q ss_pred CCCceeCCeeccCCCeeeeecCC-CCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652 36 NPGVYDGTSWKANGEIIPSINPS-TGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114 (394)
Q Consensus 36 ~~~~~i~G~~~~~~~~~~v~nP~-tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 114 (394)
..++||||+|+.++.+++++||+ ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus 37 ~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 116 (516)
T 1uzb_A 37 HYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKREL 116 (516)
T ss_dssp EECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999998667889999999 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
++++++|+|||..+++.|+..+++.++|+++.++++.+...+ ...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 117 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 196 (516)
T 1uzb_A 117 EATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVG 196 (516)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999998887765432 2234456678999999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHh------
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQS------ 202 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~------ 202 (394)
|| +|+.|++
T Consensus 197 ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~ 276 (516)
T 1uzb_A 197 PVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276 (516)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCC
T ss_pred HHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhcc
Confidence 99 7787764
Q ss_pred ----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------c------
Q psy3652 203 ----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------K------ 256 (394)
Q Consensus 203 ----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------~------ 256 (394)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ .
T Consensus 277 ~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 356 (516)
T 1uzb_A 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEE 356 (516)
T ss_dssp TTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCGGG
T ss_pred ccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCCcc
Confidence 36789999999999999999999999999999999999999999999999998 0
Q ss_pred ------------------------------C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHH
Q psy3652 257 ------------------------------I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAIT 301 (394)
Q Consensus 257 ------------------------------~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~ 301 (394)
. +..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 357 ~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 436 (516)
T 1uzb_A 357 NPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALE 436 (516)
T ss_dssp CCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHH
Confidence 0 12489999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCCC-CchHHHHHhhhheeEEEE
Q psy3652 302 WNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVTI 379 (394)
Q Consensus 302 ~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~~ 379 (394)
++|+++|||++||||+|.+++++++ .++++|+|+||+++. ...+.+||||+|.||+|+ ++|.+++++|++.|+|++
T Consensus 437 ~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~ 514 (516)
T 1uzb_A 437 VANDTPYGLTGGVYSRKREHLEWAR--REFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAE 514 (516)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHH--HhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEe
Confidence 9999999999999999999999999 889999999998543 345678999999999995 789999999999999987
Q ss_pred e
Q psy3652 380 N 380 (394)
Q Consensus 380 ~ 380 (394)
+
T Consensus 515 ~ 515 (516)
T 1uzb_A 515 R 515 (516)
T ss_dssp E
T ss_pred c
Confidence 5
No 33
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.6e-75 Score=593.65 Aligned_cols=343 Identities=27% Similarity=0.400 Sum_probs=314.3
Q ss_pred CCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652 37 PGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114 (394)
Q Consensus 37 ~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 114 (394)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999973 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHH
Q psy3652 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIA 194 (394)
Q Consensus 115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~a 194 (394)
++++++|+|||..+++.|+..+++.++|+++..+.+.++..+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999987777665543321234456788999999999999999999999999999
Q ss_pred h----------------------------------------------------------------hHHHHHh----hhhh
Q psy3652 195 L----------------------------------------------------------------VGVAVQS----RFGK 206 (394)
Q Consensus 195 L----------------------------------------------------------------~g~~i~~----~~~~ 206 (394)
| +|+.|++ ++||
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~p 245 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKR 245 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCCc
Confidence 9 7777765 4789
Q ss_pred hccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCce-EEEecc------------------------------
Q psy3652 207 LLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRR-LFLHKK------------------------------ 255 (394)
Q Consensus 207 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~r-v~V~~~------------------------------ 255 (394)
+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++
T Consensus 246 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~gpl 325 (486)
T 1t90_A 246 VQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPV 325 (486)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCC
T ss_pred EEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCccCCC
Confidence 9999999999999999999999999999999999999999999 999986
Q ss_pred -----------------------c-C-----CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcC
Q psy3652 256 -----------------------K-I-----DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEV 306 (394)
Q Consensus 256 -----------------------~-~-----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~ 306 (394)
. . ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 326 i~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~ 405 (486)
T 1t90_A 326 IREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKS 405 (486)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCC
Confidence 0 0 0248999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCchHHHHHhhhheeEEEEec
Q psy3652 307 KQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG--RESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 307 ~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~f~~~k~v~~~~ 381 (394)
+|||++||||+|.+++++++ .++++|+|+||++.....+.+||||+|.||+| +++|.+++++|++.|+|++++
T Consensus 406 ~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 406 EFANGACLFTSNSNAIRYFR--ENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp SEESEEEEECCBHHHHHHHH--HHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEEEcCCHHHHHHHH--HhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999 88999999999865444567999999999999 899999999999999999876
No 34
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=3.4e-75 Score=591.49 Aligned_cols=328 Identities=29% Similarity=0.376 Sum_probs=306.9
Q ss_pred eeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH
Q psy3652 51 IIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI 130 (394)
Q Consensus 51 ~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 130 (394)
+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------
Q psy3652 131 GEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------- 195 (394)
Q Consensus 131 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------- 195 (394)
.|+..+++.++|+++.++++.+...+.. .+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999988776654432 355678899999999999999999999999999999
Q ss_pred -------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEecC
Q psy3652 196 -------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNED 222 (394)
Q Consensus 196 -------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~d 222 (394)
+|+.|++ ++||+++|||||||+||++|
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~d 243 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDD 243 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCC
Confidence 6777764 56899999999999999999
Q ss_pred CCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------------------------------
Q psy3652 223 ADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------------------------------- 255 (394)
Q Consensus 223 ADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------------------------------- 255 (394)
||++.|++.+++++|.|+||.|++++|||||++
T Consensus 244 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a 323 (484)
T 3ros_A 244 ADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEA 323 (484)
T ss_dssp CCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999
Q ss_pred ------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHH
Q psy3652 256 ------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLF 323 (394)
Q Consensus 256 ------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~ 323 (394)
..+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 324 ~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 403 (484)
T 3ros_A 324 IDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAK 403 (484)
T ss_dssp HHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHH
T ss_pred HHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHH
Confidence 01246899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652 324 KWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 324 ~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
+++ .++++|+|+||+++ ...+.+||||+|.||+|+++|++++++|++.|+|+++..
T Consensus 404 ~~~--~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 459 (484)
T 3ros_A 404 KVS--AQIETGMTVINGRW-ITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTK 459 (484)
T ss_dssp HHH--HHSCSSCCEETSCC-CCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECGG
T ss_pred HHH--HhCccceEEECCCC-CCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECCC
Confidence 999 88999999999864 456789999999999999999999999999999998754
No 35
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-75 Score=591.45 Aligned_cols=338 Identities=26% Similarity=0.386 Sum_probs=289.8
Q ss_pred CCCCCCceeCCeecc--CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhC
Q psy3652 33 GSVNPGVYDGTSWKA--NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHK 110 (394)
Q Consensus 33 ~~~~~~~~i~G~~~~--~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (394)
|....++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++
T Consensus 4 m~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 4 MRDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp CEECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 344567999999973 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChHHh-HHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHH
Q psy3652 111 LVPLGQLVSLEMGKILAEG-IGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGW 189 (394)
Q Consensus 111 ~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~ 189 (394)
+++|++++++|+|||..++ ..|+..+++.++++++.++++.+... ....++.++|+|||++|+|||||+.+.++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHH
Confidence 9999999999999999999 78999999999999999888765432 12457789999999999999999999999
Q ss_pred HHHHHh-----------------------------------------------------------------hHHHHHh--
Q psy3652 190 NAAIAL-----------------------------------------------------------------VGVAVQS-- 202 (394)
Q Consensus 190 ~~~~aL-----------------------------------------------------------------~g~~i~~-- 202 (394)
++++|| +|+.|++
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 999999 4555554
Q ss_pred --hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------
Q psy3652 203 --RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------- 255 (394)
Q Consensus 203 --~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------- 255 (394)
+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 239 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 239 AKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp TTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred HhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 46899999999999999999999999999999999999999999999999999
Q ss_pred -----------------------------cC-C-------CCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHH
Q psy3652 256 -----------------------------KI-D-------RPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDE 298 (394)
Q Consensus 256 -----------------------------~~-~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 298 (394)
.. . ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 398 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE 398 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence 00 0 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEE
Q psy3652 299 AITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVT 378 (394)
Q Consensus 299 Ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~ 378 (394)
||+++|+++|||++||||+|.+++++++ .++++|+|+||+ ....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~v~vN~--~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 399 AIQIANDTKYGLAGYVIGKDKETLHKVA--RSIEAGTVEINE--AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHH--HHSCSSEEEETT--CC----------------------CCGGGEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHH--HhCCcCeEEECC--CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999 889999999998 344567899999999999999999999999999986
Q ss_pred E
Q psy3652 379 I 379 (394)
Q Consensus 379 ~ 379 (394)
.
T Consensus 475 ~ 475 (478)
T 3ty7_A 475 G 475 (478)
T ss_dssp T
T ss_pred E
Confidence 3
No 36
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.7e-74 Score=586.25 Aligned_cols=336 Identities=25% Similarity=0.384 Sum_probs=304.0
Q ss_pred CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA 127 (394)
Q Consensus 48 ~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 127 (394)
++++++++||+||+++++++.++++|+++||++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HhHHHHHHHHHHHHHHHHhhhhccC-cccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------
Q psy3652 128 EGIGEVQEFIDICDYAVGLSRTYSG-SILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------- 195 (394)
Q Consensus 128 ~a~~ev~~~~~~l~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------- 195 (394)
++..|+..+++.++++++...++.+ .......++......++|+|||++|+|||||+.+.++++++||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 5567999999999999988766543 3333333455566788999999999999999999999999999
Q ss_pred ---------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEEe
Q psy3652 196 ---------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIVN 220 (394)
Q Consensus 196 ---------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~ 220 (394)
+|+.|++ ++||+++|||||||+||+
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~ 242 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINYVDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVL 242 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEEC
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhccceEEeccccchhhhhhhhhhcccccccccCCCcCccccC
Confidence 7777764 678999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc---------------------------------------------
Q psy3652 221 EDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------------------------------------- 255 (394)
Q Consensus 221 ~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------- 255 (394)
+|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 243 ~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~ 322 (474)
T 4h7n_A 243 ESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHIL 322 (474)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998
Q ss_pred -------------c--CCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652 256 -------------K--IDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320 (394)
Q Consensus 256 -------------~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~ 320 (394)
. ....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 323 ~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 402 (474)
T 4h7n_A 323 DAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSED 402 (474)
T ss_dssp HHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHH
T ss_pred HHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHH
Confidence 0 0135899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEecCC-ccc
Q psy3652 321 NLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINHGK-EIT 386 (394)
Q Consensus 321 ~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~~~-~~~ 386 (394)
++++++ .++++|+|+||+... ...+..||||+|.||+| +++|.+++++|++.|+|+++... ..|
T Consensus 403 ~a~~~a--~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p 469 (474)
T 4h7n_A 403 EALKVA--RQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDP 469 (474)
T ss_dssp HHHHHH--TTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCT
T ss_pred HHHHHH--HhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCC
Confidence 999999 889999999998653 33467899999999998 78999999999999999998643 444
No 37
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=1.2e-73 Score=578.66 Aligned_cols=330 Identities=28% Similarity=0.439 Sum_probs=306.0
Q ss_pred CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH
Q psy3652 48 NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA 127 (394)
Q Consensus 48 ~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 127 (394)
+...++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh------------
Q psy3652 128 EGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL------------ 195 (394)
Q Consensus 128 ~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL------------ 195 (394)
+++.|+..+++.++|+++..+++.+.. +...++...++.++|+|||++|+|||||+.+.++++++||
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999999988776654 2223345678899999999999999999999999999999
Q ss_pred ----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEE
Q psy3652 196 ----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIV 219 (394)
Q Consensus 196 ----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV 219 (394)
+|+.|++ +++|+++|||||||+||
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV 243 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence 6777764 56899999999999999
Q ss_pred ecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------------------------------------
Q psy3652 220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK-------------------------------------------- 255 (394)
Q Consensus 220 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-------------------------------------------- 255 (394)
++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999998
Q ss_pred ---------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHH
Q psy3652 256 ---------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVT 320 (394)
Q Consensus 256 ---------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~ 320 (394)
..+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 324 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~ 403 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDT 403 (462)
T ss_dssp HHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHH
T ss_pred HHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 01136899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 321 NLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 321 ~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++++++ .++++|+|+||++. ...+.+||||+|.||+|+++|.+++++|++.|+|+++.
T Consensus 404 ~a~~~~--~~l~aG~v~vN~~~-~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 404 LAAEMA--ARLECGGVFINGYS-ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHH--HHCCSSEEEESSCC-CCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHH--HhCCcceEEECCCC-CCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 999999 88999999999864 45678999999999999999999999999999998763
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=6.2e-72 Score=575.40 Aligned_cols=355 Identities=20% Similarity=0.280 Sum_probs=313.8
Q ss_pred hhhcCCCCCCCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHH
Q psy3652 26 LKELGLSGSVNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIG 104 (394)
Q Consensus 26 ~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 104 (394)
+.++... ....++||||+|+.++..+.++||+| |+++++++.++.+|+++||++|++||+.|+.+|.++|.++|++++
T Consensus 54 ~~~~~~~-~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a 132 (563)
T 4e3x_A 54 LKDLKGQ-TEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAA 132 (563)
T ss_dssp HHTTTTC-CEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHhC-CccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4444433 34577999999997666788999998 799999999999999999999999999999999999999999999
Q ss_pred HHHhhC-HHHHHHHHHHHcCCChHHhHHH-HHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCc
Q psy3652 105 DALRHK-LVPLGQLVSLEMGKILAEGIGE-VQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNF 182 (394)
Q Consensus 105 ~~l~~~-~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~ 182 (394)
++|+++ +++|++++++|+|||..++..| +..+++.++|+++.++++.+.......++...+..+.|+|||++|+||||
T Consensus 133 ~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNf 212 (563)
T 4e3x_A 133 DMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNF 212 (563)
T ss_dssp HHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSC
T ss_pred HHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchH
Confidence 999998 9999999999999999999876 99999999999999988776543322223445667888899999999999
Q ss_pred hhHhHHHHHHHHh----------------------------------------------------------------hHH
Q psy3652 183 PVAVYGWNAAIAL----------------------------------------------------------------VGV 198 (394)
Q Consensus 183 P~~~~~~~~~~aL----------------------------------------------------------------~g~ 198 (394)
|+.+..+++++|| +|+
T Consensus 213 P~~~~~~~~apALaGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~ 292 (563)
T 4e3x_A 213 TAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFK 292 (563)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHhhcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHH
Confidence 9999999999997 677
Q ss_pred HHHh----hhh------hhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------
Q psy3652 199 AVQS----RFG------KLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------- 255 (394)
Q Consensus 199 ~i~~----~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------- 255 (394)
.|++ ++| |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 293 ~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~ 372 (563)
T 4e3x_A 293 HLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEH 372 (563)
T ss_dssp HHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHH
Confidence 7764 455 49999999999999999999999999999999999999999999999999
Q ss_pred -------c-C----------------------------------------CCCCceecCeEEEcCCCCCcccccccccce
Q psy3652 256 -------K-I----------------------------------------DRPGYFVEPTIVTGLPHNSRVVHRETFAPI 287 (394)
Q Consensus 256 -------~-~----------------------------------------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPv 287 (394)
. . +..|+|++|||+.+++++|++++||+||||
T Consensus 373 ~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPV 452 (563)
T 4e3x_A 373 SRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPV 452 (563)
T ss_dssp HTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSE
T ss_pred HhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeE
Confidence 1 0 014799999999999999999999999999
Q ss_pred EEEEeeCC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-CCCCCCCccCCCCCCCC-CC
Q psy3652 288 VYVFPFDS--LDEAITWN-NEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-GAEIGGAFGGEKYTGGG-RE 362 (394)
Q Consensus 288 l~v~~~~~--~~eAi~~~-n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~~~~~~pfGG~~~SG~G-~~ 362 (394)
++|++|+| +||||+++ |+++|||+++|||+|.+++++++++.++++|+|+||+.++ ...+.+||||+|.||+| ++
T Consensus 453 l~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~ 532 (563)
T 4e3x_A 453 LTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKP 532 (563)
T ss_dssp EEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCT
T ss_pred EEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCcc
Confidence 99999997 79999999 7999999999999999999999932224599999998643 33567899999999998 89
Q ss_pred chHHHHHhhhheeEEEEec
Q psy3652 363 SGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 363 ~g~~~l~~f~~~k~v~~~~ 381 (394)
+|.+++++|++.|+|..+.
T Consensus 533 ~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 533 GGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TSTTGGGGGBCCEEEEEEC
T ss_pred CCHHHHHHhCceEEEEEeC
Confidence 9999999999999999885
No 39
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=4.9e-72 Score=565.77 Aligned_cols=329 Identities=23% Similarity=0.265 Sum_probs=285.8
Q ss_pred CeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHh
Q psy3652 50 EIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEG 129 (394)
Q Consensus 50 ~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 129 (394)
..+++.||.||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHHHHHHHHHHHHhhhhccCc-ccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------
Q psy3652 130 I-GEVQEFIDICDYAVGLSRTYSGS-ILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------- 195 (394)
Q Consensus 130 ~-~ev~~~~~~l~~~a~~~~~~~~~-~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------- 195 (394)
+ .|+..+++.++|+++.++++.+. ..+.. ..+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 69999999999999888776432 11111 1235577899999999999999999999999999999
Q ss_pred ----------------------------------------------------hHHHHHh----hhhhhccccCCCCeEEE
Q psy3652 196 ----------------------------------------------------VGVAVQS----RFGKLLLELGGNNAIIV 219 (394)
Q Consensus 196 ----------------------------------------------------~g~~i~~----~~~~~~lElgGk~p~iV 219 (394)
+|+.|++ ++||+++|||||||+||
T Consensus 166 s~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV 245 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIV 245 (457)
T ss_dssp CTTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEE
T ss_pred CCCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeE
Confidence 6777764 56899999999999999
Q ss_pred ecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------cC----------------------------
Q psy3652 220 NEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------KI---------------------------- 257 (394)
Q Consensus 220 ~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~~---------------------------- 257 (394)
++|||++.|++.+++++|.|+||.|++++|||||++ .+
T Consensus 246 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (457)
T 3lns_A 246 LPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQG 325 (457)
T ss_dssp CTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCS
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999 11
Q ss_pred --------CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc-CCCCcEEEEEcCCHHHHHHhhcc
Q psy3652 258 --------DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE-VKQGLSSSIFTKDVTNLFKWLGP 328 (394)
Q Consensus 258 --------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~-~~~gLsa~v~t~d~~~a~~~~~~ 328 (394)
+..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++||||+|.+++++++
T Consensus 326 ~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~-- 403 (457)
T 3lns_A 326 QVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGII-- 403 (457)
T ss_dssp EEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHH--
T ss_pred eEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHH--
Confidence 025789999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred cccceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEe
Q psy3652 329 QGSDCGLINVNIPT-NGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 329 ~~~~~g~V~iN~~~-~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~ 380 (394)
.++++|+|+||++. ....+.+||||+|.||+|+++|.+++++|++.|+|++.
T Consensus 404 ~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 404 NQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp HTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred HhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 88999999999864 23467899999999999999999999999999999764
No 40
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=9e-72 Score=568.14 Aligned_cols=335 Identities=25% Similarity=0.389 Sum_probs=305.6
Q ss_pred CCceeCCeecc-CCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652 37 PGVYDGTSWKA-NGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115 (394)
Q Consensus 37 ~~~~i~G~~~~-~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 115 (394)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|+
T Consensus 6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999984 45789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh
Q psy3652 116 QLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL 195 (394)
Q Consensus 116 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL 195 (394)
+++++|+|||..+++.|+..+++.++|+++..+.+.+...+.. .+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766544321 234456679999999999999999999999999999
Q ss_pred ----------------------------------------------------------------hHHHHHh----hhhhh
Q psy3652 196 ----------------------------------------------------------------VGVAVQS----RFGKL 207 (394)
Q Consensus 196 ----------------------------------------------------------------~g~~i~~----~~~~~ 207 (394)
+|+.|++ +++|+
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence 7788775 45787
Q ss_pred -ccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-------------------------------
Q psy3652 208 -LLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK------------------------------- 255 (394)
Q Consensus 208 -~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~------------------------------- 255 (394)
++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++
T Consensus 245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~G 324 (490)
T 3ju8_A 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMG 324 (490)
T ss_dssp EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBC
T ss_pred EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccc
Confidence 799999999999999999999999999999999999999999999987
Q ss_pred ------------------------------cCCCCCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhc
Q psy3652 256 ------------------------------KIDRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNE 305 (394)
Q Consensus 256 ------------------------------~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~ 305 (394)
..+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+++|+
T Consensus 325 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~ 403 (490)
T 3ju8_A 325 AVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREANA 403 (490)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHHhc
Confidence 001258999999998 9999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEec
Q psy3652 306 VKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 306 ~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~ 381 (394)
++|||++||||+|.+++++++ .++++|+|+||+++....+.+||||+|.||++ ++++|++.|+|++..
T Consensus 404 ~~~gL~a~v~t~d~~~a~~~~--~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 404 TQYGLAAGLLSDSRERFEQFL--VESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp SSCCSEEEEECSCHHHHHHHH--HHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred CCCCceEEEEcCCHHHHHHHH--HhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 999999999999999999999 88999999999876555678999999999985 478999999988775
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.9e-71 Score=598.09 Aligned_cols=346 Identities=27% Similarity=0.469 Sum_probs=317.5
Q ss_pred CCCCceeCCeeccCCCeeeeecCCC-CCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHH
Q psy3652 35 VNPGVYDGTSWKANGEIIPSINPST-GETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVP 113 (394)
Q Consensus 35 ~~~~~~i~G~~~~~~~~~~v~nP~t-g~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 113 (394)
...++||||+|+.++.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|+++|+++|++++++|++++++
T Consensus 530 ~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~~e 609 (1026)
T 4f9i_A 530 KTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFE 609 (1026)
T ss_dssp EEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999997788999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHH
Q psy3652 114 LGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAI 193 (394)
Q Consensus 114 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ 193 (394)
|++++++|+|||..++..|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 610 La~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ 689 (1026)
T 4f9i_A 610 LSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASA 689 (1026)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988876654433234556678899999999999999999999999999
Q ss_pred Hh-----------------------------------------------------------------hHHHHHhh-----
Q psy3652 194 AL-----------------------------------------------------------------VGVAVQSR----- 203 (394)
Q Consensus 194 aL-----------------------------------------------------------------~g~~i~~~----- 203 (394)
|| +|+.|++.
T Consensus 690 ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~ 769 (1026)
T 4f9i_A 690 AIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVH 769 (1026)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCC
T ss_pred HHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhccc
Confidence 99 67777642
Q ss_pred -----hhhhccccCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecc-----------------------
Q psy3652 204 -----FGKLLLELGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK----------------------- 255 (394)
Q Consensus 204 -----~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~----------------------- 255 (394)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++
T Consensus 770 ~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d 849 (1026)
T 4f9i_A 770 PGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED 849 (1026)
T ss_dssp TTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTS
T ss_pred ccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCccc
Confidence 4689999999999999999999999999999999999999999999999999
Q ss_pred ----------------------------------cCCC-CCceecCeEEEcCCCCCcccccccccceEEEEeeCCHHHHH
Q psy3652 256 ----------------------------------KIDR-PGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAI 300 (394)
Q Consensus 256 ----------------------------------~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi 300 (394)
..+. .|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 850 ~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI 929 (1026)
T 4f9i_A 850 PANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAI 929 (1026)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHH
T ss_pred ccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHH
Confidence 0112 39999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC-CCCCCCccCCCCCCCCC-CchHHHHHhhhheeEEE
Q psy3652 301 TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG-AEIGGAFGGEKYTGGGR-ESGSDSWKQYCRRSTVT 378 (394)
Q Consensus 301 ~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~-~~~~~pfGG~~~SG~G~-~~g~~~l~~f~~~k~v~ 378 (394)
+++|+++|||+++|||+|.+.+++++ .++++|+|+||..+.+ ....+||||+|.||+|+ .+|++++++|++.|+|+
T Consensus 930 ~~aN~t~yGLt~~V~t~d~~~a~~~~--~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~ 1007 (1026)
T 4f9i_A 930 EWANSTQFALTGGIFSRSPEHLAKAR--REFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVT 1007 (1026)
T ss_dssp HHHTCSSCCSEEEEECCCHHHHHHHH--HHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEE
T ss_pred HHHHcCCCCCeEEEECCCHHHHHHHH--HhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEE
Confidence 99999999999999999999999999 8899999999986543 34568999999999995 68999999999999999
Q ss_pred EecC
Q psy3652 379 INHG 382 (394)
Q Consensus 379 ~~~~ 382 (394)
++..
T Consensus 1008 ~~~~ 1011 (1026)
T 4f9i_A 1008 ENTM 1011 (1026)
T ss_dssp EECC
T ss_pred Eecc
Confidence 9864
No 42
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.7e-71 Score=570.17 Aligned_cols=341 Identities=23% Similarity=0.265 Sum_probs=304.4
Q ss_pred CCceeCCeec-cCCCeeeeecCCCCCeEEEEeCCCHHHHHHHHHHHHHH-HHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652 37 PGVYDGTSWK-ANGEIIPSINPSTGETIASVQQGNVQDYHRCIESSRAA-YAAWAALPAPRRGEIVRQIGDALRHKLVPL 114 (394)
Q Consensus 37 ~~~~i~G~~~-~~~~~~~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 114 (394)
.++||||+|+ .++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|.++|.++|++++++|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (534)
T 2y53_A 8 LKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDY 86 (534)
T ss_dssp CCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 5689999998 344679999999999999999998 9999999999999 599999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhhccC-------cccCCCCCC-ceeEeeeccc-eeEEEEccCCchhH
Q psy3652 115 GQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRTYSG-------SILPSERPG-HVLLENWNPL-GVVGIISAFNFPVA 185 (394)
Q Consensus 115 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~-------~~~~~~~~~-~~~~~~~~P~-GVV~~I~p~N~P~~ 185 (394)
++++++|+|||..+++.|+..+++.++|+++.++++.+ +..+...++ ...++.++|+ |||++|+|||||+.
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 166 (534)
T 2y53_A 87 YAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSW 166 (534)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHH
Confidence 99999999999999988999999999999998776543 211221122 2356789997 99999999999999
Q ss_pred hHHHHHHHHh---------------------------------------------------------------hHHHHHh
Q psy3652 186 VYGWNAAIAL---------------------------------------------------------------VGVAVQS 202 (394)
Q Consensus 186 ~~~~~~~~aL---------------------------------------------------------------~g~~i~~ 202 (394)
+.++++++|| +|+.|++
T Consensus 167 ~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l~~vd~V~FTGS~~~G~~i~~ 246 (534)
T 2y53_A 167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQIRSFDVVSFTGSADTAATLRA 246 (534)
T ss_dssp HHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGCCTTCEEEEESCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcccccCEEEEECCHHHHHHHHH
Confidence 9999999999 7888874
Q ss_pred ------hhhhhccccCCCCeEEEecCC-----CHHHHHHHHHHHhhCcCCCcccCCceEEEecc----------------
Q psy3652 203 ------RFGKLLLELGGNNAIIVNEDA-----DLNLAQQCLVFACCGTAGQRCTTTRRLFLHKK---------------- 255 (394)
Q Consensus 203 ------~~~~~~lElgGk~p~iV~~dA-----Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~---------------- 255 (394)
++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++
T Consensus 247 ~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 326 (534)
T 2y53_A 247 HPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAKI 326 (534)
T ss_dssp SHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHTTC
T ss_pred hhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHHHHhc
Confidence 368999999999999999999 99999999999999999999999999999999
Q ss_pred ------------------------------------c-C--C---------CCCceecCeEEEcCCCC--Cccccccccc
Q psy3652 256 ------------------------------------K-I--D---------RPGYFVEPTIVTGLPHN--SRVVHRETFA 285 (394)
Q Consensus 256 ------------------------------------~-~--~---------~~g~~~~Ptvl~~v~~~--~~i~~eE~FG 285 (394)
. . . ..|+|++|||+.+++++ |++++||+||
T Consensus 327 ~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFG 406 (534)
T 2y53_A 327 TVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFG 406 (534)
T ss_dssp CBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSS
T ss_pred cCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcC
Confidence 0 0 0 24899999999999987 6999999999
Q ss_pred ceEEEEeeC---CH-----HHHHHHHhcCCCCcEEEEEcCCHHHHHHhhccccc--ceeEEEEcCCCC--------CCCC
Q psy3652 286 PIVYVFPFD---SL-----DEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGS--DCGLINVNIPTN--------GAEI 347 (394)
Q Consensus 286 Pvl~v~~~~---~~-----~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~--~~g~V~iN~~~~--------~~~~ 347 (394)
||++|++|+ |+ ||||+++|+++|||++||||+|.+++++++ .++ ++|+|+||+++. ...+
T Consensus 407 PVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~~aG~V~vN~~~~~~~~~~~~~~~~ 484 (534)
T 2y53_A 407 PVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA--LELADSHGRVHAISPSVQHSQTGHGNVMP 484 (534)
T ss_dssp SEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH--HHHTTTEEEEEEECGGGTTTCCCSSCCCT
T ss_pred CEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH--HHHHhhCCEEEEcCCcccccccccCCCCC
Confidence 999999999 99 999999999999999999999999999999 788 899999997532 1346
Q ss_pred CCCccCCCCCCCCCC-chHHHHHhhhheeEEEEe
Q psy3652 348 GGAFGGEKYTGGGRE-SGSDSWKQYCRRSTVTIN 380 (394)
Q Consensus 348 ~~pfGG~~~SG~G~~-~g~~~l~~f~~~k~v~~~ 380 (394)
.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 485 ~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 485 MSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp TSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 789999999999999 699999999999998764
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.6e-71 Score=565.68 Aligned_cols=359 Identities=19% Similarity=0.190 Sum_probs=305.9
Q ss_pred ccCCcchhhhhcCCCCCCCCCceeCCeeccCCCeeeeecCCCCCeEE-EEeCCCHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy3652 18 DSVSKYPFLKELGLSGSVNPGVYDGTSWKANGEIIPSINPSTGETIA-SVQQGNVQDYHRCIESSRAAYAAWAALPAPRR 96 (394)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~nP~tg~~i~-~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R 96 (394)
.-+.+...|+.... |....++||||+|+.+.. ++||+||++++ +++.++.+|+++|+++|++||+.|+.+|.++|
T Consensus 12 ~~~~~~~~~~~~~~-~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R 87 (528)
T 3v4c_A 12 DLGTENLYFQSMMI-FTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKER 87 (528)
T ss_dssp -----------CCS-CCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ccCcccHHHHHhhh-cccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence 34455666776553 467788999999985443 99999999998 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHhhhh--ccCccc----CCC--CCCceeEeee
Q psy3652 97 GEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGLSRT--YSGSIL----PSE--RPGHVLLENW 168 (394)
Q Consensus 97 ~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~~--~~~~~~~~~~ 168 (394)
.++|++++++|++++++|++++++|+|||..+++.|+..+++.++|+++.+++ +.+... +.. .++...++.+
T Consensus 88 ~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (528)
T 3v4c_A 88 AAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQ 167 (528)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEE
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEe
Confidence 99999999999999999999999999999999999999999999999998876 223221 110 1223457789
Q ss_pred ccceeEEEEccCCchhHhHH--HHHHHHh---------------------------------------------------
Q psy3652 169 NPLGVVGIISAFNFPVAVYG--WNAAIAL--------------------------------------------------- 195 (394)
Q Consensus 169 ~P~GVV~~I~p~N~P~~~~~--~~~~~aL--------------------------------------------------- 195 (394)
+|+|||++|+|||||+.+.+ +++++||
T Consensus 168 ~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~ 247 (528)
T 3v4c_A 168 RPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGH 247 (528)
T ss_dssp EECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHH
T ss_pred eCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHH
Confidence 99999999999999999754 8999998
Q ss_pred ------------------hHHHHHh----hh--hhhccccCCCCeEEEecCC---CHHHHHHHHHHHhhCcCCCcccCCc
Q psy3652 196 ------------------VGVAVQS----RF--GKLLLELGGNNAIIVNEDA---DLNLAQQCLVFACCGTAGQRCTTTR 248 (394)
Q Consensus 196 ------------------~g~~i~~----~~--~~~~lElgGk~p~iV~~dA---Dl~~aa~~i~~~~~~~~GQ~C~a~~ 248 (394)
+|+.|++ ++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++
T Consensus 248 ~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~ 327 (528)
T 3v4c_A 248 ALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPG 327 (528)
T ss_dssp HHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCC
T ss_pred HHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCc
Confidence 6777765 34 7999999999999999999 8999999999999999999999999
Q ss_pred eEEEecc---------------------------------------c-C--------CCCCceecCeEEEcCCCC---Cc
Q psy3652 249 RLFLHKK---------------------------------------K-I--------DRPGYFVEPTIVTGLPHN---SR 277 (394)
Q Consensus 249 rv~V~~~---------------------------------------~-~--------~~~g~~~~Ptvl~~v~~~---~~ 277 (394)
|||||++ . - ...|+|+.|||+.+++++ |+
T Consensus 328 rvlV~~~~i~d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~ 407 (528)
T 3v4c_A 328 IAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFLADH 407 (528)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEEEECCCCCTTEECCEEEEEEHHHHHHCG
T ss_pred EEEEecccHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEEEeCCCcCCceeccEEEEecCcccccCh
Confidence 9999984 0 0 125899999999988887 89
Q ss_pred ccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcC--CHHHHHHhhcccccc--eeEEEEcCCCCC--CCCCCCc
Q psy3652 278 VVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTK--DVTNLFKWLGPQGSD--CGLINVNIPTNG--AEIGGAF 351 (394)
Q Consensus 278 i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~--d~~~a~~~~~~~~~~--~g~V~iN~~~~~--~~~~~pf 351 (394)
+++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++ .+++ +|+|+||+++.. ..+.+||
T Consensus 408 i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a--~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 408 ALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR--PVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp GGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH--HHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred hhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH--HHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 9999999999999999999999999999999999999999 899999999 7787 999999986432 3577999
Q ss_pred cC-CCCCCCCCCc--hHHHHHhhhheeEEEEecCC
Q psy3652 352 GG-EKYTGGGRES--GSDSWKQYCRRSTVTINHGK 383 (394)
Q Consensus 352 GG-~~~SG~G~~~--g~~~l~~f~~~k~v~~~~~~ 383 (394)
|| +|.||+|+++ |++++++|++.|++ .++|.
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~p~ 519 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY-QNMPE 519 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESCCG
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcCCc
Confidence 99 9999999986 99999999999864 34443
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.1e-69 Score=549.43 Aligned_cols=313 Identities=20% Similarity=0.303 Sum_probs=279.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhH-HHHHHHHHHHHHHHHh
Q psy3652 68 QGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGI-GEVQEFIDICDYAVGL 146 (394)
Q Consensus 68 ~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~ 146 (394)
..+.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356779999999999999999999999999999999999999999999999999999999997 5999999999988876
Q ss_pred hhhccCcccCC---CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652 147 SRTYSGSILPS---ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------------- 195 (394)
Q Consensus 147 ~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------------- 195 (394)
...+....... ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 65543211110 11234577899999999999999999999999999999
Q ss_pred ----------------------------------hHHHHHh----hhhhhccccCCCCeEEEecCCCHHHHHHHHHHHhh
Q psy3652 196 ----------------------------------VGVAVQS----RFGKLLLELGGNNAIIVNEDADLNLAQQCLVFACC 237 (394)
Q Consensus 196 ----------------------------------~g~~i~~----~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~ 237 (394)
+|+.|++ ++||+++|||||||+||++|||++.|++.+++++|
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 253 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF 253 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 7777765 56899999999999999999999999999999999
Q ss_pred CcCCCcccCCceEEEecc----------------------------------------------------cCCCCCceec
Q psy3652 238 GTAGQRCTTTRRLFLHKK----------------------------------------------------KIDRPGYFVE 265 (394)
Q Consensus 238 ~~~GQ~C~a~~rv~V~~~----------------------------------------------------~~~~~g~~~~ 265 (394)
.|+||.|++++|||||++ ..+..|+|++
T Consensus 254 ~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~~GG~~~~~g~~~~ 333 (469)
T 3sza_A 254 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIA 333 (469)
T ss_dssp GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEEECCCEETTTTEEC
T ss_pred hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEEeCCccCCCCceeC
Confidence 999999999999999999 0012589999
Q ss_pred CeEEEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC-C
Q psy3652 266 PTIVTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN-G 344 (394)
Q Consensus 266 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~-~ 344 (394)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... .
T Consensus 334 PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~~G~V~vN~~~~~~ 411 (469)
T 3sza_A 334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI--AETSSGGVAANDVIVHI 411 (469)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH--HHCCCSEEEESCSSGGG
T ss_pred CeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH--HhCCcceEEEeCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 889999999998642 3
Q ss_pred CCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecC
Q psy3652 345 AEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 345 ~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
..+.+||||+|.||+|+++|.+++++|++.|+|+++..
T Consensus 412 ~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~ 449 (469)
T 3sza_A 412 TLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPL 449 (469)
T ss_dssp SCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCS
T ss_pred CCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCc
Confidence 46789999999999999999999999999999998753
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-67 Score=538.26 Aligned_cols=329 Identities=18% Similarity=0.214 Sum_probs=290.5
Q ss_pred CCCeeeeecCCCCCeE-EEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh
Q psy3652 48 NGEIIPSINPSTGETI-ASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL 126 (394)
Q Consensus 48 ~~~~~~v~nP~tg~~i-~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 126 (394)
++.+++++||+||+++ ++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||.
T Consensus 5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 84 (510)
T 1ez0_A 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 84 (510)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 5678999999999999 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhh--ccCccc----CCCCC-C-ceeEeeeccceeEEEEccCCchhHhH--HHHHHHHh-
Q psy3652 127 AEGIGEVQEFIDICDYAVGLSRT--YSGSIL----PSERP-G-HVLLENWNPLGVVGIISAFNFPVAVY--GWNAAIAL- 195 (394)
Q Consensus 127 ~~a~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~GVV~~I~p~N~P~~~~--~~~~~~aL- 195 (394)
.+++.|+..+++.++|+++.+++ +.+... +...+ + ...++.++|+|||++|+|||||+.+. ++++++||
T Consensus 85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 99999999999999999998875 433322 11111 1 13567899999999999999999984 49999998
Q ss_pred --------------------------------------------------------------------hHHHHHh----h
Q psy3652 196 --------------------------------------------------------------------VGVAVQS----R 203 (394)
Q Consensus 196 --------------------------------------------------------------------~g~~i~~----~ 203 (394)
+|+.|++ +
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 244 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 244 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence 7787765 3
Q ss_pred h--hhhccccCCCCeEEEecCCCHH--HHHHHHHHHhhCcCCCcccCCceEEEecc-c----------------------
Q psy3652 204 F--GKLLLELGGNNAIIVNEDADLN--LAQQCLVFACCGTAGQRCTTTRRLFLHKK-K---------------------- 256 (394)
Q Consensus 204 ~--~~~~lElgGk~p~iV~~dADl~--~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~-~---------------------- 256 (394)
+ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ .
T Consensus 245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~gp~~~ 324 (510)
T 1ez0_A 245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLT 324 (510)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCCBCCSS
T ss_pred CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCCCCCCC
Confidence 3 8999999999999999999999 99999999999999999999999999996 0
Q ss_pred --------------C-C---------CCCceecCeEEEcCCCC---CcccccccccceEEEEeeCCHHHHHHHHhcCCCC
Q psy3652 257 --------------I-D---------RPGYFVEPTIVTGLPHN---SRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQG 309 (394)
Q Consensus 257 --------------~-~---------~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~g 309 (394)
. . .+|+|+.|||+.+++++ |++++||+||||++|++|+|+||||+++|+++||
T Consensus 325 ~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~g 404 (510)
T 1ez0_A 325 PGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGS 404 (510)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCC
Confidence 0 0 02799999999888777 9999999999999999999999999999999999
Q ss_pred cEEEEEcCCH--HHHHHhhccccc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCC--chHHHHHhhhheeEEE
Q psy3652 310 LSSSIFTKDV--TNLFKWLGPQGS--DCGLINVNIPTNG--AEIGGAFGG-EKYTGGGRE--SGSDSWKQYCRRSTVT 378 (394)
Q Consensus 310 Lsa~v~t~d~--~~a~~~~~~~~~--~~g~V~iN~~~~~--~~~~~pfGG-~~~SG~G~~--~g~~~l~~f~~~k~v~ 378 (394)
|++||||+|. +++++++ .++ ++|+|+||+++.. ..+.+|||| +|.||+|+. +|.+++++|++.|++.
T Consensus 405 Laa~v~t~d~~~~~a~~~~--~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 405 LTATIHATEEDYPQVSQLI--PRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp EEEEEECCGGGHHHHHHHH--HHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred eEEEEEccCcCHHHHHHHH--HHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 9999999987 7899999 777 7999999986432 346799999 799999854 7999999999888664
No 46
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-64 Score=509.59 Aligned_cols=328 Identities=16% Similarity=0.109 Sum_probs=262.3
Q ss_pred eeecCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHc-------CCC
Q psy3652 53 PSINPSTGETIASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEM-------GKI 125 (394)
Q Consensus 53 ~v~nP~tg~~i~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 125 (394)
-++||+||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----HhHHHHHHHHHHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----
Q psy3652 126 LA----EGIGEVQEFIDICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---- 195 (394)
Q Consensus 126 ~~----~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---- 195 (394)
.. ++..|+..+++.++|+++.++++.+...+.. .++...++.++|+|||++|+||| |+... +++++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 97 4678999999999999988877766553321 12445678899999999999776 66655 6777777
Q ss_pred ---------------------------------------------------------------hHHHHHhh--hhhhccc
Q psy3652 196 ---------------------------------------------------------------VGVAVQSR--FGKLLLE 210 (394)
Q Consensus 196 ---------------------------------------------------------------~g~~i~~~--~~~~~lE 210 (394)
+|+.|++. +||+++|
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aal~pv~lE 247 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGH 247 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCSSSCBCSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcCCCCEEEe
Confidence 77888764 4899999
Q ss_pred cCCCCeEEEecCCCHHHHHHHHHHHhhCcCCCcccCCceEEEecccCC------------CCCceec-----CeEEEcCC
Q psy3652 211 LGGNNAIIVNEDADLNLAQQCLVFACCGTAGQRCTTTRRLFLHKKKID------------RPGYFVE-----PTIVTGLP 273 (394)
Q Consensus 211 lgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~------------~~g~~~~-----Ptvl~~v~ 273 (394)
||||||+||++|||++.|++.+++++|.| ||.|++++|||||++..+ ..|..+. +.....++
T Consensus 248 lGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~~~~Ga~v~~G~~~~~~g~~~~ 326 (463)
T 2h5g_A 248 SEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSP 326 (463)
T ss_dssp SCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHHHHTTCEEEECHHHHC------
T ss_pred cCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHHHhCCCEEEeCCcccccCccCC
Confidence 99999999999999999999999999999 999999999999998433 1121110 00111246
Q ss_pred CCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccC
Q psy3652 274 HNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGG 353 (394)
Q Consensus 274 ~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG 353 (394)
++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++. ..+.+||||
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~--~~l~aG~V~iN~~~~-~~~~~PfGG 403 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFL--QHVDSACVFWNASTR-FSDGYRFGL 403 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTS
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEEeCCcc-CCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999 889999999998653 456799999
Q ss_pred CCCCCCC--CC--chHHHHHhhhheeEEEEecCCccc
Q psy3652 354 EKYTGGG--RE--SGSDSWKQYCRRSTVTINHGKEIT 386 (394)
Q Consensus 354 ~~~SG~G--~~--~g~~~l~~f~~~k~v~~~~~~~~~ 386 (394)
+|.||+| ++ +|.+++++|++.|+|+++.....|
T Consensus 404 ~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~~~r~ 440 (463)
T 2h5g_A 404 GAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVS 440 (463)
T ss_dssp SCCSCEECCSSSCCEECCGGGGEEEEEEEECSSCCGG
T ss_pred CccCcCCCCcccCCCHHHHHHhceeEEEEECCCcccC
Confidence 9999999 76 899999999999999998654333
No 47
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=4.8e-63 Score=534.64 Aligned_cols=312 Identities=26% Similarity=0.396 Sum_probs=284.0
Q ss_pred EeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHH
Q psy3652 66 VQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVG 145 (394)
Q Consensus 66 v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~ 145 (394)
++.++.+|+++|+++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++..|+..+++.++|+++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCcccC-CCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------------
Q psy3652 146 LSRTYSGSILP-SERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------------- 195 (394)
Q Consensus 146 ~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------------- 195 (394)
.++++.+.... ....+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 98886654311 122356677899999999999999999999999999999
Q ss_pred -----------------------------------hHHHHHhh-------hhhhccccCCCCeEEEecCCCHHHHHHHHH
Q psy3652 196 -----------------------------------VGVAVQSR-------FGKLLLELGGNNAIIVNEDADLNLAQQCLV 233 (394)
Q Consensus 196 -----------------------------------~g~~i~~~-------~~~~~lElgGk~p~iV~~dADl~~aa~~i~ 233 (394)
+|+.|++. ++|+++|+|||||+||++|||++.|++.++
T Consensus 704 lP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv 783 (1001)
T 3haz_A 704 IPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVV 783 (1001)
T ss_dssp CCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHH
T ss_pred cCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHH
Confidence 77777652 578999999999999999999999999999
Q ss_pred HHhhCcCCCcccCCceEEEecc--------------------------------------------------------cC
Q psy3652 234 FACCGTAGQRCTTTRRLFLHKK--------------------------------------------------------KI 257 (394)
Q Consensus 234 ~~~~~~~GQ~C~a~~rv~V~~~--------------------------------------------------------~~ 257 (394)
+++|.|+||.|++++|||||++ ..
T Consensus 784 ~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~ 863 (1001)
T 3haz_A 784 TSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGP 863 (1001)
T ss_dssp HHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECC
T ss_pred HHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeEecccc
Confidence 9999999999999999999999 01
Q ss_pred CCCCceecCeEEEcCCCCCcccccccccceEEEEeeCC--HHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeE
Q psy3652 258 DRPGYFVEPTIVTGLPHNSRVVHRETFAPIVYVFPFDS--LDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGL 335 (394)
Q Consensus 258 ~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~ 335 (394)
+..|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++++++ .++++|+
T Consensus 864 ~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a--~~l~aG~ 939 (1001)
T 3haz_A 864 APEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII--DRVQVGN 939 (1001)
T ss_dssp CCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH--HHCCCSE
T ss_pred CCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH--HhCCeee
Confidence 12489999999974 6889999999999999999996 7999999999999999999999999999999 8899999
Q ss_pred EEEcCCCCCC-CCCCCccCCCCCCCC-CCchHHHHHhhhheeEEEEec
Q psy3652 336 INVNIPTNGA-EIGGAFGGEKYTGGG-RESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 336 V~iN~~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~f~~~k~v~~~~ 381 (394)
|+||.++.+. ...+||||+|.||+| +.+|++++++|++.|+|+++.
T Consensus 940 V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 940 IYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp EEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred EEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 9999875433 346799999999999 568899999999999999985
No 48
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=4.1e-59 Score=467.31 Aligned_cols=301 Identities=23% Similarity=0.316 Sum_probs=261.4
Q ss_pred CHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh----HHhH--------HHHHHHH
Q psy3652 70 NVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL----AEGI--------GEVQEFI 137 (394)
Q Consensus 70 ~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~ 137 (394)
..+++++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .++. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999986 4553 6899999
Q ss_pred HHHHHHHHhhhhccCcccCCC--CCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh--------------------
Q psy3652 138 DICDYAVGLSRTYSGSILPSE--RPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL-------------------- 195 (394)
Q Consensus 138 ~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL-------------------- 195 (394)
+.+++++++.++ .+...+.. ..+...++.++|+|||++|+||| | .+.++++++||
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 999999988765 34332211 12344678899999999999986 3 68889999998
Q ss_pred --------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCC
Q psy3652 196 --------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDAD 224 (394)
Q Consensus 196 --------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dAD 224 (394)
+|+.|++ .+||+++|||||||+||++|||
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a~~~v~lELGGk~p~iV~~dAD 248 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESAD 248 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSC
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhcCCCEEEecCCCceEEEeCCCC
Confidence 7777775 4689999999999999999999
Q ss_pred HHHHHHHHHHHhhCcCCCcccCCceEEEecc--------------cCC-----C---CCceecCeEEEcCCCCCcccccc
Q psy3652 225 LNLAQQCLVFACCGTAGQRCTTTRRLFLHKK--------------KID-----R---PGYFVEPTIVTGLPHNSRVVHRE 282 (394)
Q Consensus 225 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~--------------~~~-----~---~g~~~~Ptvl~~v~~~~~i~~eE 282 (394)
++.|++.+++++|.|+| .|++++|||||++ .+. . .| |+ ||| ++++|++++||
T Consensus 249 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~gg~~~~~-~~-Ptl---~~~~~~i~~eE 322 (427)
T 1o20_A 249 LKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTRE-IV-PDV---VPATEDDWPTE 322 (427)
T ss_dssp HHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHHHH-HS-TTS---EECCGGGTTCC
T ss_pred HHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCeeecChhhhh-hC-Ccc---cCCCcchhhcc
Confidence 99999999999999999 9999999999999 011 0 13 44 896 24578999999
Q ss_pred cccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC--
Q psy3652 283 TFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG-- 360 (394)
Q Consensus 283 ~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G-- 360 (394)
+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||++.. ..+..||||.|.||+|
T Consensus 323 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~ 399 (427)
T 1o20_A 323 YLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV--SEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQ 399 (427)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH--HHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECS
T ss_pred cccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHH--HhCCccEEEECCCCc-cCCCCCCCCcccccccCC
Confidence 99999999999999999999999999999999999999999999 889999999998643 4567899999999997
Q ss_pred --CCchHHHHHhhhheeEEEEecC
Q psy3652 361 --RESGSDSWKQYCRRSTVTINHG 382 (394)
Q Consensus 361 --~~~g~~~l~~f~~~k~v~~~~~ 382 (394)
+++|++++++|++.|+|++..+
T Consensus 400 ~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 400 RFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp SSSCCEECCTGGGEEEEEEEECSS
T ss_pred cccCCChHHHHHHhceEEEEECCC
Confidence 4679999999999999998753
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.1e-59 Score=470.38 Aligned_cols=301 Identities=17% Similarity=0.171 Sum_probs=233.2
Q ss_pred HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCCh----HHhH-HHHHH-HHHHHHHHHHh
Q psy3652 73 DYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKIL----AEGI-GEVQE-FIDICDYAVGL 146 (394)
Q Consensus 73 ~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~a~~ 146 (394)
.+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||. .++. .|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999998 8885 79988 88999999988
Q ss_pred hhhcc------CcccCCC-C-CCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh-----------------------
Q psy3652 147 SRTYS------GSILPSE-R-PGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL----------------------- 195 (394)
Q Consensus 147 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL----------------------- 195 (394)
++.+. +...+.. . .+...++.++|+|||++|+||| | .+.++++++||
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 77764 3332211 1 2345678999999999999999 9 88889999988
Q ss_pred -------------------------------------------------hHHHHHh-hhhhhccccCCCCeEEEecCCCH
Q psy3652 196 -------------------------------------------------VGVAVQS-RFGKLLLELGGNNAIIVNEDADL 225 (394)
Q Consensus 196 -------------------------------------------------~g~~i~~-~~~~~~lElgGk~p~iV~~dADl 225 (394)
+|+.|++ .+||+++|||||||+||++|||+
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a~kpv~lElGGk~p~iV~~dADl 252 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADL 252 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCH
T ss_pred HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhcCCCEEeecCCccceEECCCCCH
Confidence 6666664 46789999999999999999999
Q ss_pred HHHHHHHHHHhhCcCCCcccCCceEEEecccCCC-------------C---C-----ce--------------ecCeEEE
Q psy3652 226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKKKIDR-------------P---G-----YF--------------VEPTIVT 270 (394)
Q Consensus 226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~~-------------~---g-----~~--------------~~Ptvl~ 270 (394)
+.|++.+++++|.|+| .|++++|||||++. ++ - | .+ +.||++
T Consensus 253 ~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~Ptvl- 329 (468)
T 1vlu_A 253 IKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQCKTV- 329 (468)
T ss_dssp HHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHTTBC-
T ss_pred HHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCCcee-
Confidence 9999999999999999 99999999999972 10 0 1 01 468887
Q ss_pred cCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCC
Q psy3652 271 GLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGA 350 (394)
Q Consensus 271 ~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~p 350 (394)
++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++ .++++|+|+||+++. ..+..|
T Consensus 330 -v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~--~~l~aG~V~vN~~~~-~~~~~p 405 (468)
T 1vlu_A 330 -DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM--KGVDSSGVYWNASTR-FADGFR 405 (468)
T ss_dssp --------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHH--HHCCCSEEEESSCGG-GCC---
T ss_pred -eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHH--HhCCeeEEEEcCCCC-CCCCCC
Confidence 7889999999999999999999999999999999999999999999999999999 889999999998653 456789
Q ss_pred cc-----CCCCCCCCCCchHHHHHhhhheeEEEEecCC
Q psy3652 351 FG-----GEKYTGGGRESGSDSWKQYCRRSTVTINHGK 383 (394)
Q Consensus 351 fG-----G~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~ 383 (394)
|| |+|.||+|++ |.+++++|++.|+|+++.+.
T Consensus 406 fG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~~~ 442 (468)
T 1vlu_A 406 YGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGDGQ 442 (468)
T ss_dssp --------------------CCSGGGEEEEEEEECSSC
T ss_pred CCCCCCcceecCCCCCC-cchHHHHhcceEEEEECCCC
Confidence 99 9999999999 99999999999999988644
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=4.4e-58 Score=461.98 Aligned_cols=302 Identities=19% Similarity=0.185 Sum_probs=246.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChH----HhH--------HHHHHHHH
Q psy3652 71 VQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILA----EGI--------GEVQEFID 138 (394)
Q Consensus 71 ~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~ 138 (394)
.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.. ++. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHhhhhccCcccCC--CCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------
Q psy3652 139 ICDYAVGLSRTYSGSILPS--ERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------- 195 (394)
Q Consensus 139 ~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------- 195 (394)
.+++++++.+.. +...+. ...+...++.++|+|||++|+||| | .+.++++++||
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999999887643 333322 113456778999999999999998 9 58889999998
Q ss_pred -------------------------------------------------hHHHHHhh-hhhhccccCCCCeEEEecCCCH
Q psy3652 196 -------------------------------------------------VGVAVQSR-FGKLLLELGGNNAIIVNEDADL 225 (394)
Q Consensus 196 -------------------------------------------------~g~~i~~~-~~~~~lElgGk~p~iV~~dADl 225 (394)
+|+.+++. +||+++|||||||+||++|||+
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a~~pv~lELGGk~p~IV~~dADl 261 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASV 261 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHCCSCBCCCCCCCCEEEECTTCCH
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhCCCCEEEEcCCcCeEEECCCCCH
Confidence 67777754 6899999999999999999999
Q ss_pred HHHHHHHHHHhhCcCCCcccCCceEEEecccC-----------C--CC---C-----ceecCe---EEEcCCCCCccccc
Q psy3652 226 NLAQQCLVFACCGTAGQRCTTTRRLFLHKKKI-----------D--RP---G-----YFVEPT---IVTGLPHNSRVVHR 281 (394)
Q Consensus 226 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~-----------~--~~---g-----~~~~Pt---vl~~v~~~~~i~~e 281 (394)
+.|++.+++++|.|+| .|++++|||||++.. . .. | .++.-. ++ ++++|++++|
T Consensus 262 ~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~--~~~~~~~~~e 338 (444)
T 4ghk_A 262 TKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPL--VDATDEDWRT 338 (444)
T ss_dssp HHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCC--EECCSGGGTC
T ss_pred HHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcc--cCCCchhhhc
Confidence 9999999999999999 999999999999910 0 00 0 000000 11 3568999999
Q ss_pred ccccceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCCCCCCCCccCCCCCCCC-
Q psy3652 282 ETFAPIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNGAEIGGAFGGEKYTGGG- 360 (394)
Q Consensus 282 E~FGPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~~~~~~pfGG~~~SG~G- 360 (394)
|+||||++|++|+|+||||+++|+++|||++||||+|.+++++++ .++++|+|+||+++. ..+..||||.+.||+|
T Consensus 339 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a--~~l~aG~V~vN~~~~-~~~~~pfGg~~~sG~g~ 415 (444)
T 4ghk_A 339 EYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFL--REVDSASVMVNASTR-FADGFEFGLGAEIGISN 415 (444)
T ss_dssp C---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHH--HHCCSSEEEEEECGG-GCSTTTTTCSCCSEEEC
T ss_pred cccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHH--HhCCcceEEEcCCCc-cCCCCCcCCcccccccC
Confidence 999999999999999999999999999999999999999999999 889999999998753 4567899999999998
Q ss_pred ---CCchHHHHHhhhheeEEEEec
Q psy3652 361 ---RESGSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 361 ---~~~g~~~l~~f~~~k~v~~~~ 381 (394)
+++|++++++|++.|+|++..
T Consensus 416 ~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 416 DKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp CSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CcccCCChhHHHhhceEEEEEECC
Confidence 688999999999999998875
No 51
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=5.4e-57 Score=456.64 Aligned_cols=316 Identities=17% Similarity=0.153 Sum_probs=260.0
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHHHH
Q psy3652 64 ASVQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDICDY 142 (394)
Q Consensus 64 ~~v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~ 142 (394)
.+++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. +....++.+.+
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 44566789999999999999999999999999999999999999999999999999999999988763 44444444443
Q ss_pred HHHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh---------------------------
Q psy3652 143 AVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL--------------------------- 195 (394)
Q Consensus 143 ~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL--------------------------- 195 (394)
++...+ ..+.. . ...+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 84 ~~~~~~-~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 84 YIKDMK-TIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHTTCC-CSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred hhhccc-cccee-c-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 332221 11211 1 11345567889999999999999999999999999999
Q ss_pred ------------------------------------------hHHHHHhhhhhhccccC-CCCeEEEecCCCHHHHHHHH
Q psy3652 196 ------------------------------------------VGVAVQSRFGKLLLELG-GNNAIIVNEDADLNLAQQCL 232 (394)
Q Consensus 196 ------------------------------------------~g~~i~~~~~~~~lElg-Gk~p~iV~~dADl~~aa~~i 232 (394)
+.+..++++||+ +|+| ||||+||++|||++.|++.+
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i 239 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHI 239 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHHHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHHHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHH
Confidence 223333456787 8998 99999999999999999999
Q ss_pred HHHhhCcCCCcccCCceEEEecc-----------cC----------------CCCCceecC-------------------
Q psy3652 233 VFACCGTAGQRCTTTRRLFLHKK-----------KI----------------DRPGYFVEP------------------- 266 (394)
Q Consensus 233 ~~~~~~~~GQ~C~a~~rv~V~~~-----------~~----------------~~~g~~~~P------------------- 266 (394)
++++|+|+||.|++++|||||++ .. ...+..+.|
T Consensus 240 ~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~ 319 (464)
T 3k9d_A 240 LDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVP 319 (464)
T ss_dssp HHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCC
T ss_pred HHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999 00 000111111
Q ss_pred ---eEEE----cCCCCCcccccccccceEEEEeeCCHHHHH----HHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeE
Q psy3652 267 ---TIVT----GLPHNSRVVHRETFAPIVYVFPFDSLDEAI----TWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGL 335 (394)
Q Consensus 267 ---tvl~----~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi----~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~ 335 (394)
.++. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.+++++++ .++++|+
T Consensus 320 ~ga~vl~gg~~~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~--~~l~~G~ 396 (464)
T 3k9d_A 320 ADARVLIAEETKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFA--LKKPVSR 396 (464)
T ss_dssp TTCCEEEEECCCCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHH--HHSSEEE
T ss_pred CCCEEEEcCCCCCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHH--HhCCEeE
Confidence 2332 477888865 89999999999999999997 79999999999999999999999999 8899999
Q ss_pred EEEcCCCC--------CCCCCCCccCCCCCCCCCCchHHHHHhhhheeEEEEecCCcccc
Q psy3652 336 INVNIPTN--------GAEIGGAFGGEKYTGGGRESGSDSWKQYCRRSTVTINHGKEITL 387 (394)
Q Consensus 336 V~iN~~~~--------~~~~~~pfGG~~~SG~G~~~g~~~l~~f~~~k~v~~~~~~~~~~ 387 (394)
|+||+++. ...+.+|||| +.+|.|.++|..++++|++.|+|....+...++
T Consensus 397 v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~~~~~ 455 (464)
T 3k9d_A 397 LLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLELEDI 455 (464)
T ss_dssp EEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCCHHHH
T ss_pred EEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCchhhh
Confidence 99999753 2567899999 789999999999999999999999887665444
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=4.1e-55 Score=441.56 Aligned_cols=302 Identities=18% Similarity=0.204 Sum_probs=242.1
Q ss_pred EeCCCHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHHcCCChHHhHH-HHHHHHHHH-HHH
Q psy3652 66 VQQGNVQDYHRCIESSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLEMGKILAEGIG-EVQEFIDIC-DYA 143 (394)
Q Consensus 66 v~~a~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 143 (394)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999975 777667666 344
Q ss_pred HHhhhhccCcccCCCCCCceeEeeeccceeEEEEccCCchhHhHHHHHHHHh----------------------------
Q psy3652 144 VGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAVYGWNAAIAL---------------------------- 195 (394)
Q Consensus 144 a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~aL---------------------------- 195 (394)
+.. +..+.. +. .++...++.++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~--~~~g~~-~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCGIL-EE-DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSEEC---------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--cccccc-cC-CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 321 122221 11 1234457789999999999999999999999999999
Q ss_pred -----------------------------------------hHHHHHhhhhhhccccCCCCeEEEecCCCHHHHHHHHHH
Q psy3652 196 -----------------------------------------VGVAVQSRFGKLLLELGGNNAIIVNEDADLNLAQQCLVF 234 (394)
Q Consensus 196 -----------------------------------------~g~~i~~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~ 234 (394)
+++..+++.||+++|+|||||+||++|||++.|++.+++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~ 236 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLM 236 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHHHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHHHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHH
Confidence 334444567899999999999999999999999999999
Q ss_pred HhhCcCCCcccCCceEEEecc--------------------------------------cCC--------CCCceecCeE
Q psy3652 235 ACCGTAGQRCTTTRRLFLHKK--------------------------------------KID--------RPGYFVEPTI 268 (394)
Q Consensus 235 ~~~~~~GQ~C~a~~rv~V~~~--------------------------------------~~~--------~~g~~~~Ptv 268 (394)
++|+|+||.|++++|||||++ ... ..|+|++||+
T Consensus 237 s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~~G~~v~pt~ 316 (452)
T 3my7_A 237 SKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADT 316 (452)
T ss_dssp GGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHHHTCCCCTTC
T ss_pred HHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHhCCceeCCCe
Confidence 999999999999999999999 000 1388999997
Q ss_pred -------EEcCCCCCcccccccccceEEEEeeCCHHHHHHHHhcCC----CCcEEEEEcCCHHHHHH---hhccccccee
Q psy3652 269 -------VTGLPHNSRVVHRETFAPIVYVFPFDSLDEAITWNNEVK----QGLSSSIFTKDVTNLFK---WLGPQGSDCG 334 (394)
Q Consensus 269 -------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~~n~~~----~gLsa~v~t~d~~~a~~---~~~~~~~~~g 334 (394)
+.++++++++++ |+||||++|++|+|+||||+++|++. |||+++|||+|.+.+++ ++ .++++|
T Consensus 317 ~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a--~~l~~G 393 (452)
T 3my7_A 317 KVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFG--DKMKTA 393 (452)
T ss_dssp CEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHH--HHCCCS
T ss_pred eEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHH--HhCCEE
Confidence 567889999886 89999999999999999999999985 99999999999888877 98 889999
Q ss_pred EEEEcCCCCCCCCCCCccCCCCC-----------CCCCCc-----hHHHHHhhhheeEEEEec
Q psy3652 335 LINVNIPTNGAEIGGAFGGEKYT-----------GGGRES-----GSDSWKQYCRRSTVTINH 381 (394)
Q Consensus 335 ~V~iN~~~~~~~~~~pfGG~~~S-----------G~G~~~-----g~~~l~~f~~~k~v~~~~ 381 (394)
+|+||+++ +|||.+.. |.|.++ +..+.++|.+.|+|..+.
T Consensus 394 ~V~VN~~~-------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~ 449 (452)
T 3my7_A 394 RILINIPT-------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRA 449 (452)
T ss_dssp EEEESCCC-------C----------------------------CCCCCGGGGEEEEEEECCC
T ss_pred EEEECCCC-------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEEeec
Confidence 99999864 45544422 334443 345778888888887653
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=94.44 E-value=3.8 Score=39.73 Aligned_cols=79 Identities=16% Similarity=0.117 Sum_probs=48.5
Q ss_pred EEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCCC--------CCCCCCccCCCCCCCC
Q psy3652 289 YVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTNG--------AEIGGAFGGEKYTGGG 360 (394)
Q Consensus 289 ~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~~--------~~~~~pfGG~~~SG~G 360 (394)
.++.++|++|+++++|..--= -.-|.++|+..... .--.+|.|++...+.- .+.-+|- +|..
T Consensus 313 ~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~~~l~----~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT-----~G~A 382 (423)
T 4gic_A 313 GMILVDDLEQAAAVANRIAPE-HLELSVESPEVLVE----SIRNAGAIFMGRYTAEALGDYCAGPNHVLPT-----SGTA 382 (423)
T ss_dssp EEEECSSHHHHHHHHHHHCCS-EEEEESSCHHHHGG----GCCCCSEEEEC----------------CCCC-----TTGG
T ss_pred eEEEEeehHHHHHHHHhhChH-HhhhhhCCHHHHHh----hCcEeceeecCCCCchhhhhcCcCCCccCCC-----CCcc
Confidence 456789999999999986322 35677888765432 2246899999764321 1111333 4556
Q ss_pred CCchHHHHHhhhheeEE
Q psy3652 361 RESGSDSWKQYCRRSTV 377 (394)
Q Consensus 361 ~~~g~~~l~~f~~~k~v 377 (394)
|+.+..+...|+++.++
T Consensus 383 r~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 383 RFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp GTCCCCCGGGGEEEEEE
T ss_pred cccCCCCHHHeeeeeeE
Confidence 66666778888876554
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=90.17 E-value=12 Score=36.46 Aligned_cols=83 Identities=14% Similarity=0.068 Sum_probs=55.5
Q ss_pred cceEEEEeeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHhhcccccceeEEEEcCCCC--------CCCCCCCccCCCC
Q psy3652 285 APIVYVFPFDSLDEAITWNNEVKQGLSSSIFTKDVTNLFKWLGPQGSDCGLINVNIPTN--------GAEIGGAFGGEKY 356 (394)
Q Consensus 285 GPvl~v~~~~~~~eAi~~~n~~~~gLsa~v~t~d~~~a~~~~~~~~~~~g~V~iN~~~~--------~~~~~~pfGG~~~ 356 (394)
..- .|+-++|++||++++|..--= -.-|.++|+.....- --.+|.|++...+. +.+.-+|-+|
T Consensus 303 ~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~~~l~~----I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G--- 373 (434)
T 1kae_A 303 NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNARELVDS----ITSAGSVFLGDWSPESAGDYASGTNHVLPTYG--- 373 (434)
T ss_dssp TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHHHHGGG----CCSCSEEEESTTCCHHHHHHTSSSCCCCCCTT---
T ss_pred HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHHHHHhh----cCcccchhcCCCCchhhcccccCCCcccCCCC---
Confidence 444 788899999999999986332 456788888654332 24789999986541 2233345544
Q ss_pred CCCCCCchHHHHHhhhheeEEE
Q psy3652 357 TGGGRESGSDSWKQYCRRSTVT 378 (394)
Q Consensus 357 SG~G~~~g~~~l~~f~~~k~v~ 378 (394)
..|+.+..+.+.|++..++.
T Consensus 374 --~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 374 --YTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp --GGGTCCCSCGGGGEEEEEEE
T ss_pred --ceeccCCCcHHhccceeeEE
Confidence 55666666788888766553
No 55
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=35.73 E-value=62 Score=22.02 Aligned_cols=36 Identities=6% Similarity=0.138 Sum_probs=27.3
Q ss_pred HHHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652 80 SSRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115 (394)
Q Consensus 80 aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 115 (394)
-++.....|..+|.++|..........-+++..++.
T Consensus 29 i~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666789999999999988877776666665554
No 56
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=32.87 E-value=30 Score=22.21 Aligned_cols=29 Identities=14% Similarity=0.224 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHcCC
Q psy3652 96 RGEIVRQIGDALRHKLVPLGQLVSLEMGK 124 (394)
Q Consensus 96 R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 124 (394)
..++|..+...|.+.+++|.+++..|..+
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~~ 41 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELRK 41 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35788899999999999999988877643
No 57
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.20 E-value=88 Score=22.50 Aligned_cols=35 Identities=6% Similarity=0.091 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLG 115 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 115 (394)
++.....|..++.++|..........-+++..++.
T Consensus 49 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 49 SKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556789999999999988877777776666554
No 58
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=24.84 E-value=1e+02 Score=22.50 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQ 116 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 116 (394)
++.....|+.++.++|..........-+++..++.+
T Consensus 39 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~ 74 (92)
T 2crj_A 39 TKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWA 74 (92)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556799999999998887777776666655543
No 59
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.45 E-value=1.2e+02 Score=22.66 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=29.5
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVSLE 121 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e 121 (394)
++.....|..++.++|..+.......-+++..++.+-....
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~ 89 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASL 89 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34444679999999999998887777777766665544433
No 60
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=23.27 E-value=1.2e+02 Score=22.76 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=31.0
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHHHHHHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPLGQLVS 119 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 119 (394)
++.....|..++.+++..........-+.+..++.+-..
T Consensus 38 sK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 76 (101)
T 1v63_A 38 MVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK 76 (101)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566667899999999999988888877777777766443
No 61
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=22.51 E-value=90 Score=21.71 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
++.....|+.++.++|..........-+++..
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 67 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHRE 67 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34455679999999998887666665555443
No 62
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=21.20 E-value=1.9e+02 Score=20.85 Aligned_cols=37 Identities=3% Similarity=-0.039 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHh
Q psy3652 110 KLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL 146 (394)
Q Consensus 110 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~ 146 (394)
.+.+|++.++..+|.+..++..-++...+.+......
T Consensus 2 ~k~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (90)
T 1mul_A 2 NKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKE 38 (90)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999888876677777766655443
No 63
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=21.02 E-value=88 Score=21.83 Aligned_cols=34 Identities=6% Similarity=0.078 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHHHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLVPL 114 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 114 (394)
++.....|+.+|.++|..........-+++..++
T Consensus 38 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 71 (77)
T 1hme_A 38 AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 71 (77)
T ss_dssp HHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567999999999988877777666665543
No 64
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=20.67 E-value=1.9e+02 Score=20.82 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHcCCChHHhHHHHHHHHHHHHHHHHh
Q psy3652 110 KLVPLGQLVSLEMGKILAEGIGEVQEFIDICDYAVGL 146 (394)
Q Consensus 110 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~ 146 (394)
.+.+|++.++..+|.+..++..-++...+.+......
T Consensus 2 tk~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~ 38 (90)
T 1b8z_A 2 NKKELIDRVAKKAGAKKKDVKLILDTILETITEALAK 38 (90)
T ss_dssp CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999888876677777666655443
No 65
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=20.34 E-value=1e+02 Score=21.74 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=22.9
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
++.....|..+|.++|..........-+.+..
T Consensus 34 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~ 65 (80)
T 1gt0_D 34 SKRLGAEWKLLSETEKRPFIDEAKRLRALHMK 65 (80)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34455679999999998887776665555443
No 66
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=20.04 E-value=92 Score=21.81 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=22.7
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhhCHH
Q psy3652 81 SRAAYAAWAALPAPRRGEIVRQIGDALRHKLV 112 (394)
Q Consensus 81 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 112 (394)
++.....|..++.++|..........-+++..
T Consensus 34 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~ 65 (79)
T 3u2b_C 34 SKRLGKRWKLLKDSDKIPFIQEAERLRLKHMA 65 (79)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34445679999999999888766665555443
Done!