RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3656
(185 letters)
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion,
acrosom; 2.62A {Homo sapiens}
Length = 126
Score = 115 bits (291), Expect = 5e-34
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 80 TQKGCCSSCDKPIV-GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHN 138
++K C+ CD+ I + A + WH +HF C C+ L + + +P C+P Y
Sbjct: 1 SEKPRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKPVCKPCYVK 60
Query: 139 LFSPRCSYCNGPILDKC--VTALEKTWH--TEHFFCAQCGKQFG 178
+ C C+ I + VT +WH TE F C+ C K
Sbjct: 61 NHAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLI 104
Score = 65.9 bits (161), Expect = 2e-14
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 85 CSSCDKPIVG--QVITALGKTWHP--EHFICTHCNQELGTRNFFERDSRPYCEPDYHNLF 140
C C I Q +T +WH E F+C+ C++ L + F + +C +
Sbjct: 66 CQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKRM 125
Query: 141 S 141
S
Sbjct: 126 S 126
Score = 56.3 bits (136), Expect = 5e-11
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 142 PRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGE 179
PRC+ C+ I A + WH +HF C C
Sbjct: 4 PRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAG 42
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3;
intramolecular (fusion) protein-protein complex, protein
binding/transcription complex; NMR {Mus musculus}
Length = 182
Score = 116 bits (291), Expect = 2e-33
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 15/155 (9%)
Query: 28 GQPVPQQLEHSVTDSSSVSYSKPNQPVHQKGKQLDCMLDSLTAEMSRQGVTTTQKGCCSS 87
G + E +T + + N + G T + C+
Sbjct: 17 GGEFGDEDERLITRLENTQFDAANGIDDEGGSG-----------GHMGSGGTPEIPMCAG 65
Query: 88 CDKPIVGQ-VITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSY 146
CD+ I+ + ++ AL + WH + C+ C+ L R F R YC+ D+ F +C+
Sbjct: 66 CDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER-CFSRGESVYCKDDFFKRFGTKCAA 124
Query: 147 CNGPI--LDKCVTALEKTWHTEHFFCAQCGKQFGE 179
C I A + +H F C C +Q
Sbjct: 125 CQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLAT 159
Score = 61.5 bits (149), Expect = 2e-12
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 85 CSSCDKPIV--GQVITALGKTWHPEHFICTHCNQEL--GTRNFFERDSRPYCEPDYH 137
C++C I V A +H F C C ++L G + DSR C+ DY
Sbjct: 122 CAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYE 178
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1,
LIM domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Length = 101
Score = 113 bits (284), Expect = 3e-33
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Query: 85 CSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSP 142
C C KPI + + + WH F C C L F +D++ C SP
Sbjct: 8 CVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKCTTREDSP 67
Query: 143 RCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCG 174
+C C I+ D+ V WH + F G
Sbjct: 68 KCKGCFKAIVAGDQNVEYKGTVWHKDCFSGPSSG 101
Score = 54.7 bits (132), Expect = 1e-10
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 140 FSPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFGE 179
S C C PI K V + WH F CA+C
Sbjct: 4 GSSGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLAN 45
Score = 45.1 bits (107), Expect = 5e-07
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 84 CCSSCDKPIVG--QVITALGKTWHPEHFICTHC 114
C C K IV Q + G WH + F
Sbjct: 68 KCKGCFKAIVAGDQNVEYKGTVWHKDCFSGPSS 100
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein
ISL-1; protein-protein complex, LIM domain, Zn finger,
activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Length = 169
Score = 113 bits (285), Expect = 2e-32
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 78 TTTQKGCCSSCDKPIVGQ-VITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDY 136
+T + C+ CD+ I+ + ++ AL + WH + C+ C+ L R F R YC+ D+
Sbjct: 2 STPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAER-CFSRGESVYCKDDF 60
Query: 137 HNLFSPRCSYCNG--PILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
F +C+ C P A + +H F C C +Q
Sbjct: 61 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLAT 105
Score = 96.4 bits (240), Expect = 8e-26
Identities = 21/96 (21%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Query: 85 CSSCDKPIV--GQVITALGKTWHPEHFICTHCNQEL--GTRNFFERDSRPYCEPDYHNLF 140
C++C I V A +H F C C ++L G + DSR C+ DY
Sbjct: 68 CAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAK 127
Query: 141 SPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQ 176
G + A H Q
Sbjct: 128 QGGSGGSGGSGGGTPMVAASPERHDGGLQANPVEVQ 163
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene,
transcription, developmental protein; 2.40A {Homo
sapiens} PDB: 2xjz_A
Length = 131
Score = 110 bits (277), Expect = 1e-31
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 85 CSSCDKPIVGQ-VITALGKTWHPEHFICTHCNQELGTRN--FFERDSRPYCEPDYHNLFS 141
C C + I + + A+ + WH + C C LG + + R C DY LF
Sbjct: 5 CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG 64
Query: 142 PR--CSYCNGPI--LDKCVTALEKTWHTEHFFCAQCGKQFGE 179
C+ C+ I + + +K +H E F CA C K F
Sbjct: 65 QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCV 106
Score = 67.8 bits (166), Expect = 3e-15
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 81 QKGCCSSCDKPIVGQ--VITALGKTWHPEHFICTHCNQELGTRN-FFERDSRPYCEPDYH 137
Q G C+SCDK I + K +H E F C C + + + +S CE D +
Sbjct: 65 QDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIY 124
Query: 138 NL 139
Sbjct: 125 EW 126
Score = 54.0 bits (130), Expect = 5e-10
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 142 PRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEAMVKF 184
C C I D+ + A+++ WH + C CG + GE +
Sbjct: 3 LTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRL 46
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 90
Score = 101 bits (254), Expect = 6e-29
Identities = 24/66 (36%), Positives = 32/66 (48%)
Query: 80 TQKGCCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNL 139
+ C+ C++ I G + ALGK+WHPE F C HC + F E YCE Y
Sbjct: 23 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF 82
Query: 140 FSPRCS 145
F+ S
Sbjct: 83 FASGPS 88
Score = 73.2 bits (180), Expect = 9e-18
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 120 TRNFFERDSRPYCEPDYHN-LFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFG 178
+ + ++D+ +P C++CN I + AL K+WH E F CA C
Sbjct: 3 SGSSGDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMA 62
Query: 179 E 179
Sbjct: 63 Y 63
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting
protein 1, zyxin related protein 1 (ZRP-1), structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 81
Score = 98.2 bits (245), Expect = 1e-27
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 69 TAEMSRQGVTTTQKGCCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNF-FERD 127
++ S +G C++C +PI+ +++ A+GK +HP F C C++ L F +
Sbjct: 2 SSGSSGEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDAT 61
Query: 128 SRPYCEPDYHNLFSPRCS 145
S+ +C D+H F+ S
Sbjct: 62 SQIHCIEDFHRKFASGPS 79
Score = 66.2 bits (162), Expect = 4e-15
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S + +C+ C+ PILD+ + A+ K +H F C C +
Sbjct: 2 SSGSSGEGCYVATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDG 53
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3,
LIM-domain protein DRAL, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 70
Score = 95.9 bits (239), Expect = 8e-27
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 85 CSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRC 144
C C KPI +T + WH E F+CT C ++L + F RD YC + +L++
Sbjct: 8 CVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYASGP 67
Query: 145 S 145
S
Sbjct: 68 S 68
Score = 58.9 bits (143), Expect = 2e-12
Identities = 16/40 (40%), Positives = 17/40 (42%)
Query: 140 FSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S C C PI VT E+ WH E F C C KQ
Sbjct: 4 GSSGCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSG 43
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Length = 66
Score = 94.7 bits (236), Expect = 2e-26
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 84 CCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSP 142
C +C +PI G+V+ A+GK WH EHF+C C + +ER YCE Y+ LF
Sbjct: 7 ICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGD 65
Score = 65.8 bits (161), Expect = 3e-15
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 138 NLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFG 178
++ P C C PI + V A+ K WH EHF CA+C K F
Sbjct: 2 SMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFL 42
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 80
Score = 94.7 bits (236), Expect = 3e-26
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 84 CCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C C++P++ ++A+ WHPE F+C C T +FFE D RP+CE YH+
Sbjct: 17 KCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGSG 76
Query: 144 CS 145
S
Sbjct: 77 PS 78
Score = 77.0 bits (190), Expect = 2e-19
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S D+ +FSP+C CN P+L+ ++A++ WH E F C C F
Sbjct: 2 SSGSSGKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFST 53
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 77
Score = 94.4 bits (235), Expect = 4e-26
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 72 MSRQGVTTTQKGCCSSCDKPIV--GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSR 129
+S C C +++ + G+ +H + F+C C Q+ F+E + R
Sbjct: 1 ISEFMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGR 60
Query: 130 PYCEPDYHNLFSP 142
YCE D+ LF+P
Sbjct: 61 KYCEHDFQMLFAP 73
Score = 56.6 bits (137), Expect = 2e-11
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 132 CEPDYHNLFSPRCSYCNGPI--LDKCVTALEKTWHTEHFFCAQCGKQFG 178
E + L S C C G +K V + + +H + F CAQC +QF
Sbjct: 2 SEFMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFP 50
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 80
Score = 94.3 bits (235), Expect = 5e-26
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 85 CSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRC 144
C+ C K + +T + WH E +CT C L + F RD PYC + LF+
Sbjct: 18 CARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGELFASGP 77
Query: 145 S 145
S
Sbjct: 78 S 78
Score = 79.7 bits (197), Expect = 2e-20
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S P Y N F+PRC+ C+ + VT ++ WH E C C
Sbjct: 2 SSGSSGPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAG 53
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding
protein 1; B-tandem zipper, protein binding; 1.30A {Mus
musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB:
2dfy_X 2xjz_I 2xjy_B
Length = 188
Score = 97.0 bits (241), Expect = 7e-26
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 85 CSSCDKPIVGQ-VITALGKTWHPEHFICTHCNQELGTRN--FFERDSRPYCEPDYHNLF- 140
C+ C I + ++ A+ WH C+ C +LG + + C DY LF
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG 67
Query: 141 -SPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFGE 179
S CS C I + + A +H + F C+ C +
Sbjct: 68 NSGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVP 109
Score = 77.7 bits (191), Expect = 2e-18
Identities = 21/102 (20%), Positives = 32/102 (31%), Gaps = 9/102 (8%)
Query: 82 KGCCSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGT-RNFFERDSRPYCEPDYHN 138
G CS+C + I V+ A G +H + F C+ C L F + +CE D
Sbjct: 69 SGACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPT 128
Query: 139 LFSPRCSYCNGPI-LDKCVTALEKTWHTEHFFCAQCGKQFGE 179
G + G +FG+
Sbjct: 129 ALINGHLNSGGSGGSGGSGGDVMVVGE-----PTLMGGEFGD 165
Score = 57.7 bits (139), Expect = 5e-11
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 138 NLFSPRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEAMVKFI 185
+L RC+ C G I D+ + A++ WH+ C+ C Q G+
Sbjct: 2 SLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSY 50
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM
domain 3, structural genomics, NPPSFA; NMR {Mus
musculus} SCOP: g.39.1.3 g.39.1.3
Length = 89
Score = 93.7 bits (233), Expect = 1e-25
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 84 CCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C C IVG V+ A K HPE F+C CN L + +F + YCE S
Sbjct: 27 LCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTSGP 86
Query: 144 CS 145
S
Sbjct: 87 SS 88
Score = 52.1 bits (125), Expect = 1e-09
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 142 PRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
P C C I+ V A +K H E F CA C +
Sbjct: 26 PLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQ 63
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein
1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 69
Score = 92.4 bits (230), Expect = 2e-25
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 85 CSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRC 144
C C+K I IT + WH + F+C C+++L + F + + YC Y N S
Sbjct: 8 CVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVSGPS 67
Query: 145 S 145
S
Sbjct: 68 S 68
Score = 58.2 bits (141), Expect = 3e-12
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 140 FSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S C CN I +T ++ WH + F C C K+
Sbjct: 4 GSSGCVKCNKAITSGGITYQDQPWHADCFVCVTCSKKLAG 43
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM
domain protein CLP-36, contractIle protein, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 79
Score = 91.7 bits (228), Expect = 4e-25
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 85 CSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRC 144
C C IVG + + HPE ++CT C L + F + + YCE S
Sbjct: 18 CDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFFVEDQIYCEKHARERVSGPS 77
Query: 145 S 145
S
Sbjct: 78 S 78
Score = 52.4 bits (126), Expect = 7e-10
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 140 FSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
P C C I+ V ++ H E + C CG +
Sbjct: 14 KLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQ 53
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken
structural genomics/proteomics initiative, RSGI, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 72
Score = 91.3 bits (227), Expect = 6e-25
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 84 CCSSCDKPIV--GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFS 141
CS+C + ++ + + G+TWH F+C+ C Q LG+R+F YC P Y N F+
Sbjct: 7 GCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFA 66
Query: 142 PRCS 145
S
Sbjct: 67 SGPS 70
Score = 51.2 bits (123), Expect = 1e-09
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 140 FSPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFG 178
S CS C ++ + + +TWH F C+ C + G
Sbjct: 4 GSSGCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLG 44
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 70
Score = 90.6 bits (225), Expect = 1e-24
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 79 TTQKGCCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHN 138
++ C C + I+G+VI A+ +WHPE F C C + L F + R C P ++
Sbjct: 2 SSGSSGCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNR 61
Query: 139 LFSPRCS 145
+ S
Sbjct: 62 EKASGPS 68
Score = 54.0 bits (130), Expect = 1e-10
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 141 SPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S C C I+ + + A+ +WH E F C C + +
Sbjct: 5 SSGCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLAD 43
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 89.0 bits (221), Expect = 5e-24
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 84 CCSSCDKPIV--GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFS 141
C C K I+ + + G +WH FIC C Q +GT++F +D++ +C P Y +
Sbjct: 7 GCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHA 66
Query: 142 PRCS 145
S
Sbjct: 67 SGPS 70
Score = 52.0 bits (125), Expect = 7e-10
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 140 FSPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFGE 179
S C C I+ + + +WH F C +C + G
Sbjct: 4 GSSGCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGT 45
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM
domains protein 1, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 82
Score = 88.6 bits (220), Expect = 9e-24
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 85 CSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSP 142
C C K IV Q + G WH + F C++C Q +GT +FF + YC + F+
Sbjct: 18 CKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAS 77
Query: 143 RCS 145
S
Sbjct: 78 GPS 80
Score = 66.2 bits (162), Expect = 3e-15
Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFG 178
S SP+C C I+ D+ V WH + F C+ C + G
Sbjct: 2 SSGSSGKCTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCFTCSNCKQVIG 54
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1;
ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK,
IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Length = 72
Score = 85.9 bits (213), Expect = 7e-23
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 82 KGCCSSCDKPIV--GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNL 139
C C +++ + G+ +H + F+C C Q+ F+E + R YCE D+ L
Sbjct: 11 SATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQML 70
Query: 140 FS 141
F+
Sbjct: 71 FA 72
Score = 57.4 bits (139), Expect = 7e-12
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 135 DYHNLFSPRCSYCNGPI--LDKCVTALEKTWHTEHFFCAQCGKQFG 178
+ S C C G +K V + + +H + F CAQC +QF
Sbjct: 5 YFQGSASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFP 50
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting
protein 1, zyxin related protein 1 (ZRP-1), structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 84.8 bits (210), Expect = 2e-22
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 79 TTQKGCCSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDY 136
++ C C + +VG + AL + +H F+C+ C +L ++F+ + R YCE Y
Sbjct: 2 SSGSSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCY 61
Query: 137 HNLFSPRCSYC 147
Sbjct: 62 VATLE-SGPSS 71
Score = 47.1 bits (112), Expect = 6e-08
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 141 SPRCSYCNGPILDKC--VTALEKTWHTEHFFCAQCGKQFG 178
S C C ++ V AL++ +H F C+ C Q
Sbjct: 5 SSGCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLR 44
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 80
Score = 84.8 bits (210), Expect = 2e-22
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 72 MSRQGVTTTQKGCCSSCDKPIV-GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRP 130
S + + C+ C + I GQ + AL K WH F C C+ L + +D P
Sbjct: 5 SSGKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILTGE-YISKDGVP 63
Query: 131 YCEPDYHNLFSPRCS 145
YCE DYH F S
Sbjct: 64 YCESDYHAQFGSGPS 78
Score = 49.0 bits (117), Expect = 1e-08
Identities = 12/53 (22%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGE 179
S C+ C I + AL+K WH F C C
Sbjct: 2 SSGSSGKPIKIRGPSHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILTG 54
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His
protein, LIM and senescent cell antigen-like domains 1,
structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 79
Score = 82.9 bits (205), Expect = 1e-21
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 73 SRQGVTTTQKGCCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYC 132
S + K C C I Q + +HP+HF C +C +EL + E YC
Sbjct: 6 SGEKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTA-DARELKGELYC 64
Query: 133 EPDYHNLFSPRCS 145
P + + S
Sbjct: 65 LPCHDKMGVSGPS 77
Score = 53.6 bits (129), Expect = 2e-10
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 142 PRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
C C+ I ++ + +H +HF CA CGK+
Sbjct: 16 YICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTA 53
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3
g.39.1.3
Length = 72
Score = 79.1 bits (195), Expect = 4e-20
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 85 CSSCDKPIVG----QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLF 140
C+ C PI G + I+ + WH + F C C+ L R F C ++
Sbjct: 8 CAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDIS 67
Query: 141 SPRC 144
P
Sbjct: 68 GPSS 71
Score = 47.5 bits (113), Expect = 4e-08
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 138 NLFSPRCSYCNGPIL----DKCVTALEKTWHTEHFFCAQCGKQFGE 179
+ S C+ C PI K ++ E+ WH + F C +C
Sbjct: 2 SSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVG 47
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding
protein, zinc finger; NMR {Coturnix japonica} SCOP:
g.39.1.3 g.39.1.3 PDB: 2o10_A
Length = 81
Score = 78.2 bits (193), Expect = 8e-20
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 85 CSSCDKPI-VGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C +C + + + + G+++H F+C C + L + D+ YC+ Y + P+
Sbjct: 10 CGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPK 69
Query: 144 CSYC 147
Sbjct: 70 GYGY 73
Score = 40.1 bits (94), Expect = 2e-05
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 141 SPRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFG 178
+C C + V +++H F C C K
Sbjct: 7 GNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLD 45
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM
domain protein; NMR {Rattus rattus} SCOP: g.39.1.3
g.39.1.3
Length = 76
Score = 77.0 bits (190), Expect = 2e-19
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 85 CSSCDKPI-VGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYC-EPDYHNLFSP 142
C CDK + + +T+LGK WH C C + L + E + +PYC P Y +F P
Sbjct: 3 CPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYSAMFGP 62
Query: 143 RCSYCNGPILDK 154
+ G
Sbjct: 63 KGFGRGGAESHT 74
Score = 48.9 bits (117), Expect = 1e-08
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 142 PRCSYCNGPI-LDKCVTALEKTWHTEHFFCAQCGKQFG 178
P+C C+ + + VT+L K WH C +CGK
Sbjct: 1 PKCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLT 38
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1;
LIM-interaction-domain (LID), metal binding protein; NMR
{Mus musculus} SCOP: g.39.1.3 g.39.1.3
Length = 114
Score = 78.2 bits (192), Expect = 2e-19
Identities = 20/100 (20%), Positives = 30/100 (30%), Gaps = 7/100 (7%)
Query: 85 CSSCDKPIVG-QVITALGKTWHPEHFICTHCNQELGTRN--FFERDSRPYCEPDYHNLFS 141
C C + I + A+ + WH + C C LG + + R C DY L
Sbjct: 6 CGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLGG 65
Query: 142 PRCSYCNGPILDKC----VTALEKTWHTEHFFCAQCGKQF 177
+G + + E E QF
Sbjct: 66 SGGHMGSGGDVMVVGEPTLMGGEFGDEDERLITRLENTQF 105
Score = 49.7 bits (118), Expect = 2e-08
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 142 PRCSYCNGPILDKCV-TALEKTWHTEHFFCAQCGKQFGEAMVKF 184
C C I D+ A+++ WH + C CG + GE +
Sbjct: 4 LTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRL 47
Score = 25.8 bits (56), Expect = 5.2
Identities = 7/49 (14%), Positives = 12/49 (24%), Gaps = 2/49 (4%)
Query: 81 QKGCCSSCDKPIV--GQVITALGKTWHPEHFICTHCNQELGTRNFFERD 127
G S +V + E I N + N + +
Sbjct: 66 SGGHMGSGGDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDE 114
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 79.7 bits (196), Expect = 4e-19
Identities = 14/101 (13%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Query: 85 CSSCDKPI-VGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C C K + + + G ++H F+C C + L + YC+ Y + P+
Sbjct: 10 CGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGDEIYCKSCYGKKYGPK 69
Query: 144 CSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGEAMVKF 184
E + + +
Sbjct: 70 GKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQ 110
Score = 79.3 bits (195), Expect = 6e-19
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 85 CSSCDKPIV-GQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C C + + + + GK+WH F C C + L + ++D YC+ Y F P+
Sbjct: 118 CPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPK 177
Query: 144 CSYCN 148
Sbjct: 178 GFGFG 182
Score = 61.2 bits (148), Expect = 3e-12
Identities = 18/96 (18%), Positives = 24/96 (25%), Gaps = 2/96 (2%)
Query: 84 CCSSCDKPIVGQVITALG-KTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSP 142
C SC G G + + S
Sbjct: 57 YCKSCYGKKYGPKGKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSD 116
Query: 143 RCSYCNGPILD-KCVTALEKTWHTEHFFCAQCGKQF 177
C C + + V K+WH F CA+CGK
Sbjct: 117 GCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSL 152
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 81
Score = 76.0 bits (187), Expect = 7e-19
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 84 CCSSCDKPIVGQVITALGKTWHPEHFICTHCNQEL--GTRNFFERDSRPYCEPDYHNLFS 141
C C + G + A +HPE F C C + G + + YC ++ + S
Sbjct: 17 FCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVS 76
Query: 142 PRCS 145
S
Sbjct: 77 GPSS 80
Score = 71.7 bits (176), Expect = 3e-17
Identities = 13/52 (25%), Positives = 18/52 (34%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
S DY F C C+ + + A E +H E F C C +
Sbjct: 2 SSGSSGKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIED 53
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the
N-terminal LIM domain of LMO4...; fusion protein, LMO
proteins, metal binding protein; NMR {Mus musculus}
SCOP: g.39.1.3 g.39.1.3
Length = 122
Score = 76.9 bits (189), Expect = 7e-19
Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 5/98 (5%)
Query: 85 CSSCDKPIV-GQVITALGKTWHPEHFICTHCNQELGTRN--FFERDSRPYCEPDYHNLFS 141
C+ C I ++ A+ WH C+ C +LG + + C DY LF
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFG 67
Query: 142 PRCSYCNGPILDKC--VTALEKTWHTEHFFCAQCGKQF 177
+ +G + V + + F + +
Sbjct: 68 NSGAGGSGGHMGSGGDVMVVGEPTLMGGEFGDEDERLI 105
Score = 52.3 bits (125), Expect = 2e-09
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 138 NLFSPRCSYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEAMVKFI 185
+L RC+ C G I D+ + A++ WH+ C+ C Q G+
Sbjct: 2 SLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSY 50
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein
2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 82
Score = 76.0 bits (187), Expect = 7e-19
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 84 CCSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFS 141
C+ C + I + + + +H F C C + L F +DS C Y + FS
Sbjct: 17 TCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFS 76
Query: 142 PRCS 145
S
Sbjct: 77 SGPS 80
Score = 61.4 bits (149), Expect = 2e-13
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQFGE 179
S P Y N F+ C+ C I + + ++ +H F C +C + +
Sbjct: 2 SSGSSGPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLAD 55
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 76
Score = 75.1 bits (185), Expect = 1e-18
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 85 CSSCDKPI-VGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCE-PDYHNLFSP 142
C CDK + + +++LGK WH C C++ L E D +P+C P Y LF
Sbjct: 12 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGS 71
Query: 143 RCS 145
S
Sbjct: 72 GPS 74
Score = 41.2 bits (97), Expect = 8e-06
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 141 SPRCSYCNGPI-LDKCVTALEKTWHTEHFFCAQCGKQFG 178
+ +C C+ + + V++L K WH C +C K
Sbjct: 9 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLT 47
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.39.1.3 g.39.1.3
Length = 91
Score = 75.3 bits (185), Expect = 2e-18
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 85 CSSCDKPI-VGQVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPR 143
C C K + + + A + +H F C++CN +L + R YC+P ++ LF +
Sbjct: 18 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSK 77
Query: 144 CSYCNG 149
+Y G
Sbjct: 78 GNYDEG 83
Score = 35.2 bits (81), Expect = 0.002
Identities = 7/37 (18%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 141 SPRCSYCNGPI-LDKCVTALEKTWHTEHFFCAQCGKQ 176
C C + + + A ++ +H F C+ C +
Sbjct: 15 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNK 51
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN
actin- interacting protein, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 76
Score = 71.4 bits (175), Expect = 3e-17
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 84 CCSSCDKPIVG----QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNL 139
C +C KPI G + I WH E F C C+ L + F ++ +C+ +
Sbjct: 7 GCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLVGKGFLTQNKEIFCQKCGSGM 66
Query: 140 FSPRCSYCNG 149
+ +G
Sbjct: 67 DTDISGPSSG 76
Score = 47.9 bits (114), Expect = 3e-08
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 138 NLFSPRCSYCNGPIL----DKCVTALEKTWHTEHFFCAQCGKQFG 178
+ S C C+ PI K + + WH+E F C +C
Sbjct: 2 SSGSSGCVACSKPISGLTGAKFICFQDSQWHSECFNCGKCSVSLV 46
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1,
skeletal muscle LIM- protein 1, SLIM 1, structural
genomics NPPSFA; NMR {Homo sapiens}
Length = 77
Score = 69.0 bits (169), Expect = 3e-16
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 84 CCSSCDKPIVG-----QVITALGKTWHPEHFICTHCNQELGTRNFFERDSRPYCEPDYHN 138
C+ C PI G V+ G++WH F C C+ L + F + YC
Sbjct: 17 KCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPDCAKK 76
Query: 139 L 139
L
Sbjct: 77 L 77
Score = 68.3 bits (167), Expect = 5e-16
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 128 SRPYCEPDYHNLFSPRCSYCNGPIL-----DKCVTALEKTWHTEHFFCAQCGKQFGE 179
S Y N + +C+ C PI V ++WH F C +C
Sbjct: 2 SSGSSGDCYKNFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLAN 58
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1;
LMO2(LIM2)-LDB1(LID), chimera, fusion protein,
oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Length = 123
Score = 70.1 bits (171), Expect = 4e-16
Identities = 18/89 (20%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 82 KGCCSSCDKPIVG--QVITALGKTWHPEHFICTHCNQELGTRN-FFERDSRPYCEPDYHN 138
G C+SCDK I + K +H E F C C + + + +S CE D +
Sbjct: 8 DGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFSVGDRYLLINSDIVCEQDIYE 67
Query: 139 LFSPRCSYCNGPILDKCVTALEKTWHTEH 167
V + +
Sbjct: 68 WTKINGGSGGSGGSGGDVMVVGEPTLMGG 96
Score = 42.0 bits (98), Expect = 1e-05
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 136 YHNLFSPR--CSYCNGPIL--DKCVTALEKTWHTEHFFCAQCGKQF 177
Y LF C+ C+ I + + +K +H E F CA C K F
Sbjct: 1 YLRLFGQDGLCASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHF 46
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4;
protein-protein interaction, LIM-interaction DOM LMO4,
RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo
sapiens}
Length = 123
Score = 69.8 bits (170), Expect = 5e-16
Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 71 EMSRQGVTTTQKGCCSSCDKPIV-GQVITALGKTWHPEHFICTHCNQELGTRNF--FERD 127
G C+ C I ++ A+ WH C+ C +LG + +
Sbjct: 50 SGGHMGSGGLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKS 109
Query: 128 SRPYCEPDYHNLF 140
C DY LF
Sbjct: 110 GMILCRNDYIRLF 122
Score = 54.4 bits (130), Expect = 3e-10
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 106 PEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNGPILDK-CVTALEKTWH 164
++ + L RC+ C G I D+ + A++ WH
Sbjct: 26 SQYKMDVTVIDTKDGSQSKLGGGGSGGHMGSGGLSWKRCAGCGGKIADRFLLYAMDSYWH 85
Query: 165 TEHFFCAQCGKQFGEAMVKF 184
+ C+ C Q G+
Sbjct: 86 SRCLKCSSCQAQLGDIGTSS 105
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain,
ablim2, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 81
Score = 67.9 bits (166), Expect = 8e-16
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 135 DYHNLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGE 179
DY L+ RC C+ I + V+AL KT+H + F CA C F
Sbjct: 9 DYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPP 53
Score = 67.9 bits (166), Expect = 8e-16
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 84 CCSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGTRNFF-ERDSRPYCEPDYH 137
C SCD+ I G+V++ALGKT+HP+ F+C C + C+
Sbjct: 17 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSL 71
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains;
zinc finger protein, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Length = 82
Score = 52.6 bits (126), Expect = 5e-10
Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 67 SLTAEMSRQGVTTTQKGCCSSCDKPI-VGQVITALGKTWHPEHFICTHCNQEL--GTRNF 123
S + Q C+ C + + V + + G +H F C C L G
Sbjct: 2 SSGSSGQHQEAGAGDL--CALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQ 59
Query: 124 FERDSRPYCEPDYHNLFSPRCS 145
D YC S S
Sbjct: 60 HPGDGHFYCLQHLPQTDSGPSS 81
Score = 34.9 bits (80), Expect = 0.002
Identities = 6/37 (16%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 141 SPRCSYCNGPI-LDKCVTALEKTWHTEHFFCAQCGKQ 176
C+ C + + + + +H F C C
Sbjct: 15 GDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEAT 51
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.39.1.3 g.39.1.3
Length = 73
Score = 48.9 bits (116), Expect = 1e-08
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 85 CSSCDKPIVGQVITALGKTWHPEHFICTHCNQELGT-RNFFERDSRPYC 132
C SC+K I G+V+ A K +HP +C C Q + + S +
Sbjct: 8 CDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWH 56
Score = 46.6 bits (110), Expect = 7e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 140 FSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQFGEAM 181
S C C I + + A EK +H C +CG+ F E
Sbjct: 4 GSSGCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGE 45
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM
domain EVH1 DO cell motility, phosphorylation,
cytoskeleton; 2.35A {Homo sapiens}
Length = 65
Score = 40.6 bits (95), Expect = 1e-05
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 85 CSSCDKPIV--GQVITALGKTWH--PEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLF 140
C C I Q +T +WH E F+C+ C++ L + F + +C +
Sbjct: 5 CQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQKFMPVEGMVFCSVECKKRM 64
Query: 141 S 141
S
Sbjct: 65 S 65
Score = 29.4 bits (66), Expect = 0.14
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 140 FSPRCSYCNGPIL--DKCVTALEKTWHTEH--FFCAQCGK 175
+ C C+ I + VT +WH F C+ C K
Sbjct: 1 HAVVCQGCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSK 40
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.8 bits (79), Expect = 0.013
Identities = 29/214 (13%), Positives = 47/214 (21%), Gaps = 61/214 (28%)
Query: 18 LQTEPAGSPEGQPVPQQLEHSVTDSSSVSYSKPNQPVHQKGKQLDCMLDSLTAEMSRQGV 77
++TE P + + + ++K N Q +L L L + V
Sbjct: 98 IKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA---KNV 153
Query: 78 TTT-QKGCCSSC-------DKPIV----GQV--ITALGKTWHPEHFI------CTH---- 113
G + + ++ + L PE +
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN-LKNCNSPETVLEMLQKLLYQIDPN 212
Query: 114 --------CNQELGTRNFFERDSRPYCEPDYHN-L--------------FSPRCSYCNGP 150
N +L + R Y N L F+ C
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-----K 267
Query: 151 IL----DKCVTALEKTWHTEHFFCAQCGKQFGEA 180
IL K VT T H
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Score = 34.1 bits (77), Expect = 0.025
Identities = 20/145 (13%), Positives = 39/145 (26%), Gaps = 36/145 (24%)
Query: 37 HSVTDSSSVSYS-KPNQPVHQKG--KQLDC--MLDSLTAEMSRQGVTTTQKGCCSSCDKP 91
H ++ Y K V + DC + D + + + ++ D
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMP------KSILSKEE-----IDH- 53
Query: 92 IVGQVITALGKTWHPEH-----FICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSY 146
I+ F QE + F E +Y L SP +
Sbjct: 54 IIMSK--------DAVSGTLRLFWTLLSKQEEMVQKFVEE----VLRINYKFLMSPIKTE 101
Query: 147 CNGP--ILDKCVTALEKTWHTEHFF 169
P + + ++ ++ F
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVF 126
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.3 bits (73), Expect = 0.085
Identities = 17/94 (18%), Positives = 24/94 (25%), Gaps = 33/94 (35%)
Query: 26 PEGQPVPQQLEHSVTDSSSVSYSKP----NQPVH------QKGKQLDCMLDSLTAEMSRQ 75
P P + S +S P Q H G + L +
Sbjct: 222 PSNTP-----DKDYLLSIPISC--PLIGVIQLAHYVVTAKLLGFTPGELRSYL------K 268
Query: 76 GVTTTQKGCCSSCDKPIVGQVITALGKTWHPEHF 109
G T + +V V A +W E F
Sbjct: 269 GATG--------HSQGLVTAVAIAETDSW--ESF 292
>1m2k_A Silent information regulator 2; protein-ligand complex, gene
regulation; HET: APR; 1.47A {Archaeoglobus fulgidus}
SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A*
1ici_A*
Length = 249
Score = 28.3 bits (64), Expect = 1.4
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 12/51 (23%)
Query: 138 NLFSPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGKQ-------FGEAM 181
+L RC+ CN + + C +CG GE +
Sbjct: 118 SLRVVRCTSCNNSFEVESAPKIPPLPK-----CDKCGSLLRPGVVWAGEML 163
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS
protein structure initiative, joint center for
structural G hydrolase; HET: MSE; 2.20A {Escherichia
coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Length = 269
Score = 28.2 bits (63), Expect = 1.5
Identities = 4/14 (28%), Positives = 7/14 (50%)
Query: 162 TWHTEHFFCAQCGK 175
++ H +C CG
Sbjct: 102 EFYRSHKYCGYCGH 115
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling
protein/apoptosis complex; 1.80A {Homo sapiens} PDB:
2pop_B
Length = 94
Score = 26.8 bits (59), Expect = 2.0
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 105 HPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNG 149
+ C C+ + ++ H SP C + NG
Sbjct: 52 EGDTVRCFSCHAAVD---RWQYGDSAVGR---HRKVSPNCRFING 90
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics,
southeast collaboratory for structural genomics, secsg;
2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Length = 133
Score = 27.0 bits (59), Expect = 2.3
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 5 VGTFGDRLV--VCLLLQTEPAGSPEGQPVPQQLEHSVTDSSSVSYSKPNQPVHQKGKQLD 62
+ FGD L+ + L TE G P G VP + + +S + H KG +
Sbjct: 15 LAKFGDSLINFLYSLALTEFLGKPTGDRVPNASLAIALELTGLSKNLRRVDKHAKGDYAE 74
Query: 63 CML 65
++
Sbjct: 75 ALI 77
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor;
apoptosis, signaling protein, zinc binding; 2.50A {Homo
sapiens}
Length = 111
Score = 26.5 bits (58), Expect = 3.0
Identities = 8/45 (17%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 105 HPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNG 149
+ C C+ + ++ H SP C + NG
Sbjct: 69 EGDTVRCFSCHAAVD---RWQYGDSAVGR---HRKVSPNCRFING 107
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family;
enzyme-substrate complex, protein binding,
transcription; HET: ALY MES; 2.00A {Archaeoglobus
fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Length = 253
Score = 27.1 bits (61), Expect = 3.4
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 9/42 (21%)
Query: 111 CTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNGPIL 152
C C++ D++ PRC C +
Sbjct: 126 CLDCHE---------TYDWSEFVEDFNKGEIPRCRKCGSYYV 158
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila
melanogaster}
Length = 136
Score = 26.2 bits (57), Expect = 4.1
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 105 HPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNG 149
+ C C E+G +E++ +P E H +SP C
Sbjct: 67 AGDKVKCFFCGVEIG---SWEQEDQPVPE---HQRWSPNCPLLRR 105
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A
{Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A
3sip_E
Length = 116
Score = 26.1 bits (57), Expect = 4.6
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 105 HPEHFICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNG 149
+ C C E+G +E++ +P E H +SP C
Sbjct: 45 AGDKVKCFFCGVEIG---SWEQEDQPVPE---HQRWSPNCPLLRR 83
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 26.4 bits (57), Expect = 4.9
Identities = 15/81 (18%), Positives = 22/81 (27%), Gaps = 11/81 (13%)
Query: 110 ICTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNGPILDKCVTALEKTW------ 163
IC C+ T F + P C C I +++ EK
Sbjct: 77 ICNICHILKNTDGFEINQTDAKGRKTTR----PSCRECRKNIDGVKLSSTEKKKMDEIAP 132
Query: 164 -HTEHFFCAQCGKQFGEAMVK 183
F C C K+ +
Sbjct: 133 PKGSVFTCPICEKRSIVGVTA 153
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural
genomics, structural genomics consortium, SGC,
hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Length = 355
Score = 26.3 bits (58), Expect = 7.1
Identities = 4/41 (9%), Positives = 7/41 (17%)
Query: 111 CTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNGPI 151
C C + + C G +
Sbjct: 141 CAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGEL 181
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding
domain, structural genomics, struc genomics consortium,
SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Length = 318
Score = 26.2 bits (58), Expect = 7.2
Identities = 4/41 (9%), Positives = 7/41 (17%)
Query: 111 CTHCNQELGTRNFFERDSRPYCEPDYHNLFSPRCSYCNGPI 151
C C + + C G +
Sbjct: 141 CAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGEL 181
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural
genomics medical relev protein structure initiative,
PSI-2; 3.00A {Homo sapiens}
Length = 207
Score = 25.8 bits (56), Expect = 8.1
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 9/35 (25%)
Query: 141 SPRCSYCNGPILDKCVTALEKTWHTEHFFCAQCGK 175
PRC C GP + FFC QC
Sbjct: 10 YPRCWNCGGPW---------GPGREDRFFCPQCRA 35
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.134 0.438
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,738,542
Number of extensions: 148050
Number of successful extensions: 787
Number of sequences better than 10.0: 1
Number of HSP's gapped: 671
Number of HSP's successfully gapped: 151
Length of query: 185
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 97
Effective length of database: 4,244,745
Effective search space: 411740265
Effective search space used: 411740265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.2 bits)