Query psy3658
Match_columns 74
No_of_seqs 165 out of 1130
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 22:20:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3658.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3658hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2450|consensus 99.8 1.1E-20 2.4E-25 137.9 5.1 66 2-68 126-191 (501)
2 KOG2451|consensus 99.8 2.4E-19 5.2E-24 128.6 7.1 66 3-68 127-192 (503)
3 COG1012 PutA NAD-dependent ald 99.7 5.2E-18 1.1E-22 123.7 7.1 66 2-68 101-166 (472)
4 cd07126 ALDH_F12_P5CDH Delta(1 99.7 9.9E-17 2.2E-21 117.5 7.3 67 2-68 107-175 (489)
5 PRK11241 gabD succinate-semial 99.7 2.7E-16 5.9E-21 114.7 7.9 66 3-68 114-179 (482)
6 PLN02419 methylmalonate-semial 99.7 2.2E-16 4.7E-21 118.2 7.4 66 3-68 217-282 (604)
7 PLN02315 aldehyde dehydrogenas 99.6 5.4E-16 1.2E-20 113.8 7.7 66 3-68 122-187 (508)
8 TIGR03374 ABALDH 1-pyrroline d 99.6 6.6E-16 1.4E-20 112.3 7.9 66 3-68 105-170 (472)
9 PRK10090 aldehyde dehydrogenas 99.6 7.8E-16 1.7E-20 110.5 7.8 66 3-68 39-104 (409)
10 cd07117 ALDH_StaphAldA1 Unchar 99.6 1E-15 2.3E-20 111.3 7.7 65 3-68 105-169 (475)
11 cd07097 ALDH_KGSADH-YcbD Bacil 99.6 1.4E-15 3E-20 110.2 7.7 66 3-68 103-168 (473)
12 cd07116 ALDH_ACDHII-AcoD Ralst 99.6 1.3E-15 2.8E-20 110.6 7.5 65 3-68 105-169 (479)
13 PLN02174 aldehyde dehydrogenas 99.6 1.5E-15 3.2E-20 111.3 7.7 66 3-68 77-145 (484)
14 PLN02766 coniferyl-aldehyde de 99.6 1.5E-15 3.3E-20 111.2 7.7 65 3-68 127-191 (501)
15 PLN02278 succinic semialdehyde 99.6 1.7E-15 3.6E-20 110.8 7.9 66 3-68 128-193 (498)
16 PRK13968 putative succinate se 99.6 2.1E-15 4.6E-20 109.4 7.8 65 3-68 95-159 (462)
17 cd07559 ALDH_ACDHII_AcoD-like 99.6 1.9E-15 4.1E-20 110.0 7.6 65 3-68 105-169 (480)
18 PLN02467 betaine aldehyde dehy 99.6 2.1E-15 4.5E-20 110.5 7.8 66 3-68 116-184 (503)
19 TIGR01237 D1pyr5carbox2 delta- 99.6 2.2E-15 4.8E-20 110.4 7.8 66 3-68 135-200 (511)
20 PLN02466 aldehyde dehydrogenas 99.6 1.9E-15 4.1E-20 111.6 7.5 65 3-68 164-228 (538)
21 cd07086 ALDH_F7_AASADH-like NA 99.6 2.1E-15 4.6E-20 109.5 7.5 66 3-68 101-166 (478)
22 cd07142 ALDH_F2BC Arabidosis a 99.6 2.2E-15 4.9E-20 109.3 7.6 65 3-68 110-174 (476)
23 cd07140 ALDH_F1L_FTFDH 10-form 99.6 2.3E-15 5.1E-20 109.8 7.7 66 3-68 112-180 (486)
24 cd07143 ALDH_AldA_AN0554 Asper 99.6 2.7E-15 5.8E-20 109.3 7.6 65 3-68 113-177 (481)
25 PRK09406 gabD1 succinic semial 99.6 3.8E-15 8.1E-20 108.0 8.0 66 3-68 89-156 (457)
26 cd07151 ALDH_HBenzADH NADP+-de 99.6 3.3E-15 7.1E-20 108.1 7.6 66 3-68 98-163 (465)
27 cd07107 ALDH_PhdK-like Nocardi 99.6 3.5E-15 7.6E-20 107.6 7.7 65 3-68 85-149 (456)
28 PRK09847 gamma-glutamyl-gamma- 99.6 3.1E-15 6.8E-20 109.3 7.4 65 3-68 126-190 (494)
29 cd07091 ALDH_F1-2_Ald2-like AL 99.6 4.2E-15 9E-20 107.7 7.7 65 3-68 110-174 (476)
30 cd07120 ALDH_PsfA-ACA09737 Pse 99.6 4.2E-15 9.1E-20 107.7 7.7 65 3-68 86-150 (455)
31 PRK13252 betaine aldehyde dehy 99.6 4.3E-15 9.3E-20 108.1 7.6 65 3-68 111-175 (488)
32 cd07118 ALDH_SNDH Gluconobacte 99.6 5.5E-15 1.2E-19 106.8 7.8 65 4-68 88-152 (454)
33 TIGR01780 SSADH succinate-semi 99.6 5.3E-15 1.1E-19 106.6 7.6 66 3-68 85-150 (448)
34 cd07124 ALDH_PutA-P5CDH-RocA D 99.6 5.4E-15 1.2E-19 108.3 7.7 65 3-68 135-199 (512)
35 cd07150 ALDH_VaniDH_like Pseud 99.6 6.5E-15 1.4E-19 105.8 7.8 65 4-68 88-152 (451)
36 PRK13473 gamma-aminobutyraldeh 99.6 6.1E-15 1.3E-19 106.9 7.7 66 3-68 106-171 (475)
37 cd07105 ALDH_SaliADH Salicylal 99.6 6.9E-15 1.5E-19 105.5 7.8 66 3-68 66-131 (432)
38 cd07113 ALDH_PADH_NahF Escheri 99.6 6.7E-15 1.5E-19 106.9 7.8 66 3-68 105-175 (477)
39 cd07130 ALDH_F7_AASADH NAD+-de 99.6 5.4E-15 1.2E-19 107.4 7.3 65 4-68 101-165 (474)
40 cd07095 ALDH_SGSD_AstD N-succi 99.6 6.9E-15 1.5E-19 105.9 7.7 64 4-68 67-130 (431)
41 PRK03137 1-pyrroline-5-carboxy 99.6 7.4E-15 1.6E-19 107.7 7.9 65 3-68 139-204 (514)
42 cd07119 ALDH_BADH-GbsA Bacillu 99.6 7.1E-15 1.5E-19 106.7 7.7 65 3-68 103-167 (482)
43 cd07144 ALDH_ALD2-YMR170C Sacc 99.6 7.4E-15 1.6E-19 106.7 7.7 65 3-68 113-177 (484)
44 cd07139 ALDH_AldA-Rv0768 Mycob 99.6 8.9E-15 1.9E-19 105.8 7.9 66 3-68 105-170 (471)
45 cd07112 ALDH_GABALDH-PuuC Esch 99.6 7.6E-15 1.7E-19 106.2 7.5 65 3-68 93-157 (462)
46 cd07085 ALDH_F6_MMSDH Methylma 99.6 8.4E-15 1.8E-19 106.3 7.7 65 4-68 105-169 (478)
47 PLN02203 aldehyde dehydrogenas 99.6 9.5E-15 2.1E-19 106.9 8.0 66 3-68 73-141 (484)
48 cd07131 ALDH_AldH-CAJ73105 Unc 99.6 8.6E-15 1.9E-19 106.0 7.7 65 4-68 104-168 (478)
49 cd07083 ALDH_P5CDH ALDH subfam 99.6 9.2E-15 2E-19 106.8 7.9 66 3-68 121-187 (500)
50 TIGR01804 BADH glycine betaine 99.6 7.1E-15 1.5E-19 106.3 7.1 65 3-68 102-166 (467)
51 cd07152 ALDH_BenzADH NAD-depen 99.6 8.8E-15 1.9E-19 105.2 7.6 65 3-68 79-143 (443)
52 cd07109 ALDH_AAS00426 Uncharac 99.6 9.2E-15 2E-19 105.4 7.7 65 3-68 86-150 (454)
53 cd07089 ALDH_CddD-AldA-like Rh 99.6 9.8E-15 2.1E-19 105.6 7.6 66 3-68 87-156 (459)
54 cd07141 ALDH_F1AB_F2_RALDH1 NA 99.6 8E-15 1.7E-19 106.6 7.1 65 3-68 114-178 (481)
55 TIGR03216 OH_muco_semi_DH 2-hy 99.6 1.1E-14 2.4E-19 105.8 7.9 66 3-68 104-172 (481)
56 PRK09457 astD succinylglutamic 99.6 8.7E-15 1.9E-19 106.7 7.2 64 4-68 104-167 (487)
57 cd07148 ALDH_RL0313 Uncharacte 99.6 1.3E-14 2.7E-19 104.9 7.8 66 3-68 88-157 (455)
58 cd07090 ALDH_F9_TMBADH NAD+-de 99.6 1.2E-14 2.6E-19 104.8 7.6 65 3-68 85-149 (457)
59 cd07088 ALDH_LactADH-AldA Esch 99.6 1.2E-14 2.7E-19 104.9 7.6 66 3-68 101-166 (468)
60 cd07136 ALDH_YwdH-P39616 Bacil 99.6 1.2E-14 2.7E-19 105.4 7.6 65 4-68 66-133 (449)
61 cd07100 ALDH_SSADH1_GabD1 Myco 99.6 1.4E-14 3.1E-19 103.9 7.7 65 3-68 65-129 (429)
62 cd07128 ALDH_MaoC-N N-terminal 99.6 1.2E-14 2.5E-19 107.0 7.4 66 3-68 102-177 (513)
63 cd07133 ALDH_CALDH_CalB Conife 99.6 1.5E-14 3.3E-19 104.2 7.7 66 3-68 66-134 (434)
64 cd07110 ALDH_F10_BADH Arabidop 99.6 1.7E-14 3.7E-19 104.0 7.9 66 3-68 85-153 (456)
65 cd07145 ALDH_LactADH_F420-Bios 99.5 1.9E-14 4.2E-19 103.7 7.7 66 3-68 87-156 (456)
66 cd07114 ALDH_DhaS Uncharacteri 99.5 1.9E-14 4.1E-19 103.8 7.4 66 3-68 87-152 (457)
67 cd07104 ALDH_BenzADH-like ALDH 99.5 2.4E-14 5.2E-19 102.2 7.7 65 4-68 67-131 (431)
68 TIGR03250 PhnAcAld_DH putative 99.5 2.3E-14 5.1E-19 104.1 7.7 66 3-68 102-172 (472)
69 TIGR03240 arg_catab_astD succi 99.5 2E-14 4.3E-19 104.6 7.3 64 4-68 102-165 (484)
70 cd07137 ALDH_F3FHI Plant aldeh 99.5 2.6E-14 5.7E-19 103.1 7.7 66 3-68 66-134 (432)
71 cd07115 ALDH_HMSADH_HapE Pseud 99.5 2.4E-14 5.2E-19 103.2 7.5 65 3-68 86-150 (453)
72 TIGR02278 PaaN-DH phenylacetic 99.5 2.1E-14 4.6E-19 108.3 7.5 66 3-68 102-177 (663)
73 cd07146 ALDH_PhpJ Streptomyces 99.5 2.9E-14 6.2E-19 103.1 7.8 66 3-68 84-153 (451)
74 cd07135 ALDH_F14-YMR110C Sacch 99.5 2.6E-14 5.6E-19 103.2 7.5 66 3-68 72-141 (436)
75 PTZ00381 aldehyde dehydrogenas 99.5 3.1E-14 6.7E-19 104.3 7.8 65 4-68 75-142 (493)
76 cd07092 ALDH_ABALDH-YdcW Esche 99.5 2.8E-14 6.1E-19 102.5 7.4 66 3-68 86-151 (450)
77 TIGR01722 MMSDH methylmalonic 99.5 2.8E-14 6E-19 103.7 7.5 65 4-68 105-169 (477)
78 cd07108 ALDH_MGR_2402 Magnetos 99.5 3.1E-14 6.7E-19 102.7 7.6 64 4-68 87-150 (457)
79 PF00171 Aldedh: Aldehyde dehy 99.5 3.1E-14 6.7E-19 102.8 7.6 66 3-69 95-160 (462)
80 cd07094 ALDH_F21_LactADH-like 99.5 3.6E-14 7.8E-19 102.2 7.7 66 3-68 87-156 (453)
81 TIGR02299 HpaE 5-carboxymethyl 99.5 3.3E-14 7.1E-19 103.4 7.4 64 3-68 104-168 (488)
82 cd07102 ALDH_EDX86601 Uncharac 99.5 4.5E-14 9.7E-19 101.5 7.9 65 4-68 85-149 (452)
83 cd07081 ALDH_F20_ACDH_EutE-lik 99.5 2.6E-14 5.7E-19 103.6 6.4 42 27-68 87-128 (439)
84 cd07125 ALDH_PutA-P5CDH Delta( 99.5 4.5E-14 9.8E-19 103.6 7.7 66 3-68 135-200 (518)
85 cd07103 ALDH_F5_SSADH_GabD Mit 99.5 4.7E-14 1E-18 101.3 7.6 65 4-68 86-150 (451)
86 cd07082 ALDH_F11_NP-GAPDH NADP 99.5 5.9E-14 1.3E-18 101.6 7.8 66 3-68 105-174 (473)
87 cd07147 ALDH_F21_RNP123 Aldehy 99.5 5.8E-14 1.3E-18 101.1 7.7 66 3-68 87-156 (452)
88 PRK09407 gabD2 succinic semial 99.5 7E-14 1.5E-18 102.8 8.1 66 3-68 120-187 (524)
89 PRK11563 bifunctional aldehyde 99.5 4.8E-14 1.1E-18 106.3 7.3 66 3-68 106-181 (675)
90 cd07132 ALDH_F3AB Aldehyde deh 99.5 5.4E-14 1.2E-18 101.6 7.3 66 3-68 65-133 (443)
91 cd07101 ALDH_SSADH2_GabD2 Myco 99.5 7.6E-14 1.7E-18 100.7 8.0 66 3-68 84-151 (454)
92 TIGR02288 PaaN_2 phenylacetic 99.5 4.5E-14 9.8E-19 104.9 6.9 65 4-68 156-226 (551)
93 PRK11903 aldehyde dehydrogenas 99.5 4.8E-14 1E-18 103.9 6.8 66 3-68 107-181 (521)
94 cd07099 ALDH_DDALDH Methylomon 99.5 7.5E-14 1.6E-18 100.4 7.7 66 3-68 84-152 (453)
95 cd07123 ALDH_F4-17_P5CDH Delta 99.5 6.9E-14 1.5E-18 102.9 7.5 64 4-68 138-202 (522)
96 PLN00412 NADP-dependent glycer 99.5 1.2E-13 2.6E-18 101.0 8.0 66 3-68 119-191 (496)
97 TIGR01236 D1pyr5carbox1 delta- 99.5 1.3E-13 2.8E-18 101.9 7.9 64 4-68 138-202 (533)
98 cd07138 ALDH_CddD_SSP0762 Rhod 99.5 9.6E-14 2.1E-18 100.4 7.1 60 4-68 104-163 (466)
99 KOG2452|consensus 99.5 4.4E-14 9.4E-19 104.4 5.3 61 3-63 528-591 (881)
100 PRK11904 bifunctional proline 99.5 1.1E-13 2.3E-18 108.5 7.6 66 3-68 651-717 (1038)
101 PRK15398 aldehyde dehydrogenas 99.5 9.5E-14 2.1E-18 101.2 6.8 42 27-68 121-162 (465)
102 cd07121 ALDH_EutE Ethanolamine 99.5 8.1E-14 1.8E-18 100.6 6.1 41 28-68 90-130 (429)
103 cd07149 ALDH_y4uC Uncharacteri 99.5 2.3E-13 5.1E-18 97.7 7.8 66 3-68 87-156 (453)
104 cd07093 ALDH_F8_HMSADH Human a 99.5 2.4E-13 5.1E-18 97.9 7.5 64 4-68 87-150 (455)
105 PLN02418 delta-1-pyrroline-5-c 99.5 1.1E-13 2.5E-18 105.2 6.1 62 4-68 373-436 (718)
106 cd07077 ALDH-like NAD(P)+-depe 99.4 1.5E-13 3.3E-18 97.8 5.9 60 5-68 73-132 (397)
107 cd07087 ALDH_F3-13-14_CALDH-li 99.4 3.4E-13 7.4E-18 96.9 7.7 66 3-68 65-133 (426)
108 cd07122 ALDH_F20_ACDH Coenzyme 99.4 1.5E-13 3.2E-18 99.7 5.8 43 26-68 86-128 (436)
109 cd07134 ALDH_AlkH-like Pseudom 99.4 4.2E-13 9.1E-18 96.7 7.7 65 4-68 66-133 (433)
110 cd07106 ALDH_AldA-AAD23400 Str 99.4 3.5E-13 7.7E-18 97.0 7.3 43 26-68 105-147 (446)
111 cd07098 ALDH_F15-22 Aldehyde d 99.4 6.5E-13 1.4E-17 96.0 7.8 41 28-68 113-153 (465)
112 TIGR01238 D1pyr5carbox3 delta- 99.4 7.5E-13 1.6E-17 97.2 6.1 38 31-68 156-193 (500)
113 cd07111 ALDH_F16 Aldehyde dehy 99.4 9.8E-13 2.1E-17 96.0 6.0 39 30-68 142-180 (480)
114 cd07129 ALDH_KGSADH Alpha-Keto 99.4 1.5E-12 3.2E-17 94.4 6.8 41 28-68 98-140 (454)
115 TIGR01092 P5CS delta l-pyrroli 99.4 8.9E-13 1.9E-17 100.2 5.8 40 27-68 389-428 (715)
116 PRK11809 putA trifunctional tr 99.4 9.4E-13 2E-17 105.1 6.0 38 31-68 764-801 (1318)
117 TIGR00407 proA gamma-glutamyl 99.4 9.4E-13 2E-17 94.6 5.4 62 4-68 71-134 (398)
118 cd07084 ALDH_KGSADH-like ALDH 99.4 2.3E-12 4.9E-17 93.2 7.0 65 4-68 65-133 (442)
119 cd07078 ALDH NAD(P)+ dependent 99.3 9.2E-12 2E-16 88.7 7.6 66 3-68 64-129 (432)
120 cd06534 ALDH-SF NAD(P)+-depend 99.3 1.1E-11 2.5E-16 86.7 7.7 66 3-68 60-125 (367)
121 TIGR02518 EutH_ACDH acetaldehy 99.3 4.3E-12 9.4E-17 93.0 5.3 43 26-68 95-137 (488)
122 PRK11905 bifunctional proline 99.3 5.6E-12 1.2E-16 100.2 6.0 38 31-68 672-709 (1208)
123 PRK13805 bifunctional acetalde 99.3 1.1E-11 2.5E-16 95.5 7.5 43 26-68 99-141 (862)
124 KOG2456|consensus 99.3 1E-11 2.3E-16 89.8 5.8 41 28-68 97-137 (477)
125 cd07127 ALDH_PAD-PaaZ Phenylac 99.3 2.1E-11 4.5E-16 90.8 7.2 39 30-68 188-226 (549)
126 COG4230 Delta 1-pyrroline-5-ca 99.2 7.1E-12 1.5E-16 93.7 4.4 38 31-68 232-269 (769)
127 PRK00197 proA gamma-glutamyl p 99.2 3.6E-11 7.8E-16 86.5 5.2 39 28-68 108-146 (417)
128 cd07079 ALDH_F18-19_ProA-GPR G 99.1 9.8E-11 2.1E-15 84.0 4.8 40 27-68 101-140 (406)
129 cd07080 ALDH_Acyl-CoA-Red_LuxC 98.9 9.9E-10 2.1E-14 79.3 4.0 40 28-68 105-144 (422)
130 KOG2454|consensus 98.8 7.1E-09 1.5E-13 75.5 4.5 41 28-68 181-221 (583)
131 KOG2453|consensus 98.3 1.9E-07 4.2E-12 67.1 1.8 61 8-68 126-186 (507)
132 KOG2455|consensus 97.7 3.5E-05 7.6E-10 57.0 3.5 64 4-68 165-229 (561)
133 PRK11905 bifunctional proline 96.9 0.0018 4E-08 52.6 5.0 42 24-68 1067-1108(1208)
134 PF05893 LuxC: Acyl-CoA reduct 93.1 0.1 2.3E-06 37.9 3.1 38 29-67 81-118 (399)
135 COG0014 ProA Gamma-glutamyl ph 74.3 9.1 0.0002 28.5 4.9 41 25-67 104-144 (417)
136 PRK11809 putA trifunctional tr 71.7 8.8 0.00019 32.3 4.7 42 24-68 1176-1217(1318)
137 PRK13769 histidinol dehydrogen 51.9 94 0.002 22.9 7.0 45 25-70 83-127 (368)
138 PF09129 Chol_subst-bind: Chol 45.1 24 0.00052 25.4 2.6 63 3-65 24-93 (321)
139 KOG3768|consensus 39.8 23 0.00051 28.1 2.0 26 28-53 368-395 (888)
140 cd06572 Histidinol_dh Histidin 33.8 2E+02 0.0043 21.4 7.1 66 3-69 55-128 (390)
141 smart00786 SHR3_chaperone ER m 32.1 3.4 7.4E-05 27.8 -3.1 18 57-74 130-147 (196)
142 PF08229 SHR3_chaperone: ER me 30.3 2.5 5.4E-05 28.4 -4.0 18 57-74 130-147 (196)
143 TIGR00069 hisD histidinol dehy 29.0 2.5E+02 0.0053 21.0 7.3 66 3-69 51-124 (393)
144 PF15048 OSTbeta: Organic solu 28.9 27 0.00059 21.9 0.7 11 43-53 33-43 (125)
145 PRK00877 hisD bifunctional his 27.9 2.6E+02 0.0057 21.0 6.5 66 3-69 83-156 (425)
146 PF00815 Histidinol_dh: Histid 27.9 2.6E+02 0.0057 20.9 7.4 66 3-69 68-142 (412)
147 PLN02926 histidinol dehydrogen 26.6 2.8E+02 0.0062 20.9 6.6 65 4-69 83-156 (431)
148 PF14987 NADHdh_A3: NADH dehyd 23.2 31 0.00067 20.1 0.2 8 42-49 48-55 (84)
149 PF04370 DUF508: Domain of unk 23.1 1.1E+02 0.0024 19.7 2.7 20 53-72 127-146 (156)
No 1
>KOG2450|consensus
Probab=99.82 E-value=1.1e-20 Score=137.88 Aligned_cols=66 Identities=21% Similarity=0.304 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 2 SKALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 2 ~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++||+|++++++.++..++.+ .+...+++++|+|||+.|+|||||+++..||++|||++||++|-
T Consensus 126 ~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~ 191 (501)
T KOG2450|consen 126 IDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVL 191 (501)
T ss_pred hhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEe
Confidence 5799999999999988876654 46789999999999999999999999999999999999999984
No 2
>KOG2451|consensus
Probab=99.79 E-value=2.4e-19 Score=128.60 Aligned_cols=66 Identities=26% Similarity=0.322 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.-|+|||+++++..|+.+++..++++..+.+||+||+++|+|||||.++..+|.++||++|||+|-
T Consensus 127 ~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVv 192 (503)
T KOG2451|consen 127 AFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVV 192 (503)
T ss_pred HHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEE
Confidence 458999999999999998877778899999999999999999999999999999999999999984
No 3
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.74 E-value=5.2e-18 Score=123.70 Aligned_cols=66 Identities=27% Similarity=0.374 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 2 SKALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 2 ~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...+++|++.++++.++..+... +...+++++|+|||++|+|||||+++.+||++|||++||+||-
T Consensus 101 ~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~ 166 (472)
T COG1012 101 ADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVL 166 (472)
T ss_pred HHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEE
Confidence 35688999999988887644433 5678999999999999999999999999999999999999984
No 4
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=99.68 E-value=9.9e-17 Score=117.48 Aligned_cols=67 Identities=24% Similarity=0.084 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHhhhcccc--cCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 2 SKALSTSAKRIQKELAEIT--LDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 2 ~~~~~~~a~~a~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+.+++|++.+.+..++.. +....+...+++|+|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 107 ~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVl 175 (489)
T cd07126 107 RKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLL 175 (489)
T ss_pred HHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 3568888888877766542 221124467899999999999999999999999999999999999984
No 5
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.66 E-value=2.7e-16 Score=114.68 Aligned_cols=66 Identities=20% Similarity=0.204 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+...++...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 114 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 179 (482)
T PRK11241 114 SFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVL 179 (482)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEE
Confidence 457888888887766644432234456889999999999999999999999999999999999984
No 6
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.66 E-value=2.2e-16 Score=118.19 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++++++..++..+....+...+++++|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 217 ~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVl 282 (604)
T PLN02419 217 EVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFIL 282 (604)
T ss_pred HHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 457889998888877654432234456889999999999999999999999999999999999984
No 7
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.64 E-value=5.4e-16 Score=113.83 Aligned_cols=66 Identities=39% Similarity=0.640 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.++++.++..+...++...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 122 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 187 (508)
T PLN02315 122 DMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVW 187 (508)
T ss_pred HHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEe
Confidence 357788888888776654432234455778999999999999999999999999999999999984
No 8
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.64 E-value=6.6e-16 Score=112.32 Aligned_cols=66 Identities=20% Similarity=0.217 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.++.+.++..+....+...+++|+|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 105 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~ 170 (472)
T TIGR03374 105 DVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVL 170 (472)
T ss_pred HHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEe
Confidence 346777777766655422221123456889999999999999999999999999999999999984
No 9
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.64 E-value=7.8e-16 Score=110.46 Aligned_cols=66 Identities=23% Similarity=0.162 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++++++..++..+...++...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 39 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vvl 104 (409)
T PRK10090 39 DYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVI 104 (409)
T ss_pred HHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 467889998888766543322224467889999999999999999999999999999999999984
No 10
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.63 E-value=1e-15 Score=111.28 Aligned_cols=65 Identities=25% Similarity=0.326 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~Vvl 169 (475)
T cd07117 105 DHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVI 169 (475)
T ss_pred HHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 456788887777666543322 23456889999999999999999999999999999999999984
No 11
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.62 E-value=1.4e-15 Score=110.22 Aligned_cols=66 Identities=27% Similarity=0.388 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+...++...++.++|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 103 ~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIl 168 (473)
T cd07097 103 QIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVF 168 (473)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEE
Confidence 357888888888776544332234567899999999999999999999999999999999999984
No 12
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.62 E-value=1.3e-15 Score=110.60 Aligned_cols=65 Identities=29% Similarity=0.347 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~ 169 (479)
T cd07116 105 DHFRYFAGCIRAQEGSISEID-ENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVL 169 (479)
T ss_pred HHHHHHHHhHHHcCCeeecCC-CCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 356788887777666543322 34457889999999999999999999999999999999999984
No 13
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.62 E-value=1.5e-15 Score=111.26 Aligned_cols=66 Identities=20% Similarity=0.109 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhhhcccc---cCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEIT---LDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~---~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..+... .....+...+++|+|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 145 (484)
T PLN02174 77 NSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVL 145 (484)
T ss_pred HHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 467788888877665211 111123356899999999999999999999999999999999999984
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.62 E-value=1.5e-15 Score=111.16 Aligned_cols=65 Identities=25% Similarity=0.182 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++..+.. .+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 127 ~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 191 (501)
T PLN02766 127 GLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVV 191 (501)
T ss_pred HHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 467888888888777643322 23456789999999999999999999999999999999999984
No 15
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.62 E-value=1.7e-15 Score=110.79 Aligned_cols=66 Identities=29% Similarity=0.370 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+....+...+++|+|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 128 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVl 193 (498)
T PLN02278 128 SFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVV 193 (498)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888887776544433234456788999999999999999999999999999999999984
No 16
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.61 E-value=2.1e-15 Score=109.36 Aligned_cols=65 Identities=18% Similarity=0.044 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+...... .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~ 159 (462)
T PRK13968 95 NLCDWYAEHGPAMLKAEPTLV-ENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLL 159 (462)
T ss_pred HHHHHHHHHHHHhhCCccccC-CCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 357788888777654332222 24467899999999999999999999999999999999999984
No 17
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.61 E-value=1.9e-15 Score=109.96 Aligned_cols=65 Identities=25% Similarity=0.329 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~ 169 (480)
T cd07559 105 DHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVL 169 (480)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888777666543332 24567889999999999999999999999999999999999984
No 18
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.61 E-value=2.1e-15 Score=110.53 Aligned_cols=66 Identities=23% Similarity=0.245 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHhhhccccc-CC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITL-DP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|+++++++.++... .. ..+...+++|+|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~ 184 (503)
T PLN02467 116 GCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVL 184 (503)
T ss_pred HHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 4678899988888665321 11 113356889999999999999999999999999999999999984
No 19
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.61 E-value=2.2e-15 Score=110.37 Aligned_cols=66 Identities=15% Similarity=0.067 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+....+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 135 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVl 200 (511)
T TIGR01237 135 DFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVL 200 (511)
T ss_pred HHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEE
Confidence 467888888888776543322234467889999999999999999999999999999999999984
No 20
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.61 E-value=1.9e-15 Score=111.64 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.+++|++++++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 164 ~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVl 228 (538)
T PLN02466 164 RLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 228 (538)
T ss_pred HHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEe
Confidence 467888888888877655432 23356899999999999999999999999999999999999984
No 21
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.61 E-value=2.1e-15 Score=109.50 Aligned_cols=66 Identities=42% Similarity=0.601 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.++++.++..+...++...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 101 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIl 166 (478)
T cd07086 101 DICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVW 166 (478)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEE
Confidence 456778888887776544432234466889999999999999999999999999999999999984
No 22
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.61 E-value=2.2e-15 Score=109.32 Aligned_cols=65 Identities=22% Similarity=0.291 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++++++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 110 ~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~ 174 (476)
T cd07142 110 RLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVL 174 (476)
T ss_pred HHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888877766654432 23456789999999999999999999999999999999999984
No 23
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.61 E-value=2.3e-15 Score=109.83 Aligned_cols=66 Identities=21% Similarity=0.365 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhhhcccccCC---CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP---PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++++++..++..+.. ..+...+++++|+||+++|+|||||+.+..|++++||++||+||-
T Consensus 112 ~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVl 180 (486)
T cd07140 112 QTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVL 180 (486)
T ss_pred HHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEE
Confidence 457888888888776644321 112246789999999999999999999999999999999999984
No 24
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.60 E-value=2.7e-15 Score=109.28 Aligned_cols=65 Identities=20% Similarity=0.316 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++++++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 113 ~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~Vvl 177 (481)
T cd07143 113 DTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVL 177 (481)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEE
Confidence 457888888887766644332 24456789999999999999999999999999999999999984
No 25
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.60 E-value=3.8e-15 Score=107.95 Aligned_cols=66 Identities=27% Similarity=0.184 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHhhhcccccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+...... ......+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~ 156 (457)
T PRK09406 89 KGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLL 156 (457)
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEE
Confidence 457888888877765432211 123456889999999999999999999999999999999999984
No 26
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.60 E-value=3.3e-15 Score=108.12 Aligned_cols=66 Identities=26% Similarity=0.210 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+.+..++..+....+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~ 163 (465)
T cd07151 98 AITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVL 163 (465)
T ss_pred HHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 456778877777666544332234456789999999999999999999999999999999999984
No 27
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.60 E-value=3.5e-15 Score=107.65 Aligned_cols=65 Identities=22% Similarity=0.132 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+.++.++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 85 ~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 149 (456)
T cd07107 85 ALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVV 149 (456)
T ss_pred HHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEE
Confidence 457788877777766654433 24466889999999999999999999999999999999999984
No 28
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.60 E-value=3.1e-15 Score=109.29 Aligned_cols=65 Identities=23% Similarity=0.368 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 126 ~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 190 (494)
T PRK09847 126 RAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVIL 190 (494)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 468889988888877654433 24456889999999999999999999999999999999999984
No 29
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.59 E-value=4.2e-15 Score=107.74 Aligned_cols=65 Identities=26% Similarity=0.361 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++++++..++..+.. .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 110 ~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~Vvl 174 (476)
T cd07091 110 KCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVL 174 (476)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEE
Confidence 467888888877766654432 34567889999999999999999999999999999999999974
No 30
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.59 E-value=4.2e-15 Score=107.66 Aligned_cols=65 Identities=26% Similarity=0.248 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. ++...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 86 ~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvl 150 (455)
T cd07120 86 SELRYYAGLARTEAGRMIEPE-PGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVV 150 (455)
T ss_pred HHHHHHHHHHHHhcCcccccC-CCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEe
Confidence 467888888888776544332 34567899999999999999999999999999999999999984
No 31
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.59 E-value=4.3e-15 Score=108.12 Aligned_cols=65 Identities=23% Similarity=0.246 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 111 ~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~ 175 (488)
T PRK13252 111 DVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIF 175 (488)
T ss_pred HHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEE
Confidence 467888888877766644332 24456889999999999999999999999999999999999984
No 32
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.58 E-value=5.5e-15 Score=106.77 Aligned_cols=65 Identities=22% Similarity=0.238 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+++..++..+....+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~ 152 (454)
T cd07118 88 LWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVV 152 (454)
T ss_pred HHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEE
Confidence 46777777766665443322224456789999999999999999999999999999999999984
No 33
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.58 E-value=5.3e-15 Score=106.64 Aligned_cols=66 Identities=24% Similarity=0.285 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++..+....+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 150 (448)
T TIGR01780 85 SFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVV 150 (448)
T ss_pred HHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEee
Confidence 346777777777766644332234456788999999999999999999999999999999999984
No 34
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.58 E-value=5.4e-15 Score=108.29 Aligned_cols=65 Identities=23% Similarity=0.183 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVl 199 (512)
T cd07124 135 DFLEYYAREMLRLRGFPVEMV-PGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVL 199 (512)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 467888888888866544332 34567899999999999999999999999999999999999984
No 35
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.58 E-value=6.5e-15 Score=105.84 Aligned_cols=65 Identities=26% Similarity=0.327 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+++..++..+...++...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~Vil 152 (451)
T cd07150 88 LLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVL 152 (451)
T ss_pred HHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEE
Confidence 56777777777766544433234567899999999999999999999999999999999999983
No 36
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.58 E-value=6.1e-15 Score=106.87 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.++++.+...+....+...+++|+|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 106 ~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIl 171 (475)
T PRK13473 106 DVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVL 171 (475)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEE
Confidence 356777777777665533221223456789999999999999999999999999999999999984
No 37
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.58 E-value=6.9e-15 Score=105.55 Aligned_cols=66 Identities=21% Similarity=0.178 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++..++..+...+....+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 66 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVl 131 (432)
T cd07105 66 GMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVL 131 (432)
T ss_pred HHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEE
Confidence 467788887776544443332234456889999999999999999999999999999999999984
No 38
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.58 E-value=6.7e-15 Score=106.87 Aligned_cols=66 Identities=24% Similarity=0.249 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHhhhcccccCC-----CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-----PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++++.+..++..+.. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~Vvl 175 (477)
T cd07113 105 NFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVI 175 (477)
T ss_pred HHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 357788888777666543211 112356789999999999999999999999999999999999984
No 39
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.58 E-value=5.4e-15 Score=107.38 Aligned_cols=65 Identities=43% Similarity=0.669 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.++.+.++..+...++...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 165 (474)
T cd07130 101 ICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVW 165 (474)
T ss_pred HHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEe
Confidence 45667776666655543332234456788999999999999999999999999999999999984
No 40
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=99.58 E-value=6.9e-15 Score=105.88 Aligned_cols=64 Identities=19% Similarity=0.167 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+.+..++..... ++...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~ 130 (431)
T cd07095 67 KIDISIKAYHERTGERATPM-AQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVF 130 (431)
T ss_pred HHHHHHHHHHHhcCCcccCC-CCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEe
Confidence 46677777766665543322 24567899999999999999999999999999999999999984
No 41
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.58 E-value=7.4e-15 Score=107.69 Aligned_cols=65 Identities=23% Similarity=0.187 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhhh-cccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKEL-AEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+.. ++.... ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 139 ~~~~~~a~~~~~~~~~~~~~~-~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVl 204 (514)
T PRK03137 139 DFLEYYARQMLKLADGKPVES-RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLL 204 (514)
T ss_pred HHHHHHHHHHHHhcCCccccC-CCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 35678888887764 332222 234467889999999999999999999999999999999999984
No 42
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.58 E-value=7.1e-15 Score=106.66 Aligned_cols=65 Identities=26% Similarity=0.405 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~Vil 167 (482)
T cd07119 103 NCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVI 167 (482)
T ss_pred HHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 467788888877666544332 34567899999999999999999999999999999999999984
No 43
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.58 E-value=7.4e-15 Score=106.72 Aligned_cols=65 Identities=25% Similarity=0.339 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++++++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 113 ~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 177 (484)
T cd07144 113 AVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVI 177 (484)
T ss_pred HHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888887766554432 24456889999999999999999999999999999999999984
No 44
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.57 E-value=8.9e-15 Score=105.82 Aligned_cols=66 Identities=21% Similarity=0.097 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+........+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~Vvl 170 (471)
T cd07139 105 ALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVL 170 (471)
T ss_pred HHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 357788887777654322222224456889999999999999999999999999999999999984
No 45
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.57 E-value=7.6e-15 Score=106.23 Aligned_cols=65 Identities=29% Similarity=0.461 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++..+.. .+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~ 157 (462)
T cd07112 93 NTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVL 157 (462)
T ss_pred HHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeee
Confidence 467788888877766543332 34467889999999999999999999999999999999999984
No 46
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.57 E-value=8.4e-15 Score=106.30 Aligned_cols=65 Identities=20% Similarity=0.209 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.++...++..+....+...+.+++|+||+++|+|||||+.+..|++++||++||+||-
T Consensus 105 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~Vvl 169 (478)
T cd07085 105 VVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVL 169 (478)
T ss_pred HHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEE
Confidence 46777777666666544322224457899999999999999999999999999999999999974
No 47
>PLN02203 aldehyde dehydrogenase
Probab=99.57 E-value=9.5e-15 Score=106.91 Aligned_cols=66 Identities=21% Similarity=0.096 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHhhhccc---ccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEI---TLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++. .+....+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVl 141 (484)
T PLN02203 73 KSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVL 141 (484)
T ss_pred HHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 35677777777665432 1111123467899999999999999999999999999999999999984
No 48
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.57 E-value=8.6e-15 Score=106.04 Aligned_cols=65 Identities=26% Similarity=0.360 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+++..++..+....+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 168 (478)
T cd07131 104 MAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVF 168 (478)
T ss_pred HHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEE
Confidence 46777877777666544332224457899999999999999999999999999999999999984
No 49
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.57 E-value=9.2e-15 Score=106.82 Aligned_cols=66 Identities=18% Similarity=0.103 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhhhccccc-CCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITL-DPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++... ....+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVl 187 (500)
T cd07083 121 DFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIA 187 (500)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEE
Confidence 4577888888877665321 11224456788999999999999999999999999999999999984
No 50
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.57 E-value=7.1e-15 Score=106.33 Aligned_cols=65 Identities=26% Similarity=0.283 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++..+... ....+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 102 ~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 166 (467)
T TIGR01804 102 DVFEFFAGLADKDGGEIIPLPI-PSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVF 166 (467)
T ss_pred HHHHHHHHHHHHhCCccccCCC-CceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEe
Confidence 4577888888776665443322 2456889999999999999999999999999999999999983
No 51
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.57 E-value=8.8e-15 Score=105.17 Aligned_cols=65 Identities=32% Similarity=0.361 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.+.+..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vvl 143 (443)
T cd07152 79 GELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVL 143 (443)
T ss_pred HHHHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEE
Confidence 356677776665555443332 34567889999999999999999999999999999999999983
No 52
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.57 E-value=9.2e-15 Score=105.35 Aligned_cols=65 Identities=23% Similarity=0.301 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.+++|++..++..++..+.. .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 86 ~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~Vvl 150 (454)
T cd07109 86 RYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVV 150 (454)
T ss_pred HHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888777766554432 34567899999999999999999999999999999999999984
No 53
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.57 E-value=9.8e-15 Score=105.59 Aligned_cols=66 Identities=23% Similarity=0.119 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHhhhcccc-cCC---CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEIT-LDP---PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++.. +.. ..+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvl 156 (459)
T cd07089 87 GHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVL 156 (459)
T ss_pred HHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888887766542 221 124467899999999999999999999999999999999999984
No 54
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.56 E-value=8e-15 Score=106.56 Aligned_cols=65 Identities=25% Similarity=0.319 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++++++..++..+.. .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 114 ~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVl 178 (481)
T cd07141 114 KVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVL 178 (481)
T ss_pred HHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888888777654432 23456789999999999999999999999999999999999984
No 55
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.56 E-value=1.1e-14 Score=105.82 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHhhhcccccCCC---CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP---PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.+++|++.+++..++..+... .+...+++++|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvl 172 (481)
T TIGR03216 104 ANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVV 172 (481)
T ss_pred HHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEE
Confidence 4577888888776655432211 12356788999999999999999999999999999999999874
No 56
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.56 E-value=8.7e-15 Score=106.65 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++...+..++.... ..+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vvl 167 (487)
T PRK09457 104 KIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVF 167 (487)
T ss_pred HHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 4566666666655544322 224456889999999999999999999999999999999999984
No 57
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.56 E-value=1.3e-14 Score=104.94 Aligned_cols=66 Identities=20% Similarity=0.179 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhhhcccccCC----CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP----PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 157 (455)
T cd07148 88 DGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIV 157 (455)
T ss_pred HHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEe
Confidence 356778887777766543321 123456889999999999999999999999999999999999984
No 58
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.56 E-value=1.2e-14 Score=104.78 Aligned_cols=65 Identities=25% Similarity=0.294 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+.. .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~ 149 (457)
T cd07090 85 DCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVY 149 (457)
T ss_pred HHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeee
Confidence 457888888877666544332 24567889999999999999999999999999999999999984
No 59
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.56 E-value=1.2e-14 Score=104.92 Aligned_cols=66 Identities=24% Similarity=0.209 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++++++..++..+...++...+.+++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 101 ~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVl 166 (468)
T cd07088 101 DYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVI 166 (468)
T ss_pred HHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888877766544432224467889999999999999999999999999999999999984
No 60
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.56 E-value=1.2e-14 Score=105.41 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhhcc-cccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAE-ITLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~-~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.++++.+. ..+.. ..+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~ 133 (449)
T cd07136 66 EINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVL 133 (449)
T ss_pred HHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 577888887776544 22211 123457889999999999999999999999999999999999984
No 61
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.56 E-value=1.4e-14 Score=103.91 Aligned_cols=65 Identities=23% Similarity=0.104 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+...... ++...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~ 129 (429)
T cd07100 65 WICRYYAENAEAFLADEPIET-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLL 129 (429)
T ss_pred HHHHHHHHHHHHhcCCeeccC-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 356778888877654322211 23457889999999999999999999999999999999999984
No 62
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=99.56 E-value=1.2e-14 Score=107.05 Aligned_cols=66 Identities=27% Similarity=0.142 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHhhhc--------ccccCCCCC-ceeEEeeec-CceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELA--------EITLDPPPN-YVLLENWNP-LGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+ +..+....+ ...+++++| +|||++|+|||||+.+..+++++||++||+||-
T Consensus 102 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVl 177 (513)
T cd07128 102 GTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIV 177 (513)
T ss_pred HHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEE
Confidence 357889998877652 222211112 134678999 599999999999999999999999999999984
No 63
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.55 E-value=1.5e-14 Score=104.19 Aligned_cols=66 Identities=21% Similarity=0.187 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHhhhccccc-CC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITL-DP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~-~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..+.... .. ..+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvl 134 (434)
T cd07133 66 AGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMI 134 (434)
T ss_pred HHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 4567888777765543321 11 123356889999999999999999999999999999999999984
No 64
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.55 E-value=1.7e-14 Score=103.98 Aligned_cols=66 Identities=24% Similarity=0.356 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhhhc---ccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELA---EITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.++++.+ ...+....+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 153 (456)
T cd07110 85 GCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVL 153 (456)
T ss_pred HHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 456788888777642 222222224467889999999999999999999999999999999999985
No 65
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.55 E-value=1.9e-14 Score=103.74 Aligned_cols=66 Identities=21% Similarity=0.302 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHhhhcccccCCC----CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP----PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.+++|++.++++.++..+... .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 156 (456)
T cd07145 87 RLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVV 156 (456)
T ss_pred HHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 4577888877766665433221 13356788999999999999999999999999999999999984
No 66
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.54 E-value=1.9e-14 Score=103.80 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..+....+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vil 152 (457)
T cd07114 87 EWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVL 152 (457)
T ss_pred HHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEe
Confidence 356777777766655543332234567889999999999999999999999999999999999984
No 67
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.54 E-value=2.4e-14 Score=102.21 Aligned_cols=65 Identities=31% Similarity=0.320 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+.+..++..+....+...+.+++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~ 131 (431)
T cd07104 67 ILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVL 131 (431)
T ss_pred HHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEe
Confidence 46677777766655543332234567889999999999999999999999999999999999984
No 68
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.54 E-value=2.3e-14 Score=104.09 Aligned_cols=66 Identities=20% Similarity=0.233 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHhhhcccccC----CCCCceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLD----PPPNYVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++..+. ...+...+++++|+ |||++|+|||||+.+..+++++||++||+||-
T Consensus 102 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~Vvl 172 (472)
T TIGR03250 102 DVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVV 172 (472)
T ss_pred HHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEE
Confidence 35688888887776654321 11134568899998 99999999999999999999999999999984
No 69
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.54 E-value=2e-14 Score=104.64 Aligned_cols=64 Identities=20% Similarity=0.201 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++++....+..++..... .+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 102 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVl 165 (484)
T TIGR03240 102 KVAISIKAYHERTGESENPM-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVF 165 (484)
T ss_pred HHHHHHHHHHHhcCccccCC-CCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 45556666655555432221 23456888999999999999999999999999999999999983
No 70
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.54 E-value=2.6e-14 Score=103.05 Aligned_cols=66 Identities=24% Similarity=0.114 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHhhhccc---ccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEI---TLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~---~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..+.. .+........+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 134 (432)
T cd07137 66 SSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVL 134 (432)
T ss_pred HHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEE
Confidence 35677777776644321 1111112346789999999999999999999999999999999999984
No 71
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.54 E-value=2.4e-14 Score=103.18 Aligned_cols=65 Identities=25% Similarity=0.333 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++++++..++..+.. .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 86 ~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~ 150 (453)
T cd07115 86 DTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVL 150 (453)
T ss_pred HHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEE
Confidence 346777777777766544332 34567899999999999999999999999999999999999984
No 72
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.54 E-value=2.1e-14 Score=108.29 Aligned_cols=66 Identities=26% Similarity=0.096 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHhhh--------cccccCCCC-CceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKEL--------AEITLDPPP-NYVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~--------~~~~~~~~~-~~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++.. ++..+...+ +...+++|+|+ |||++|+|||||+.+..+++++||++||+||-
T Consensus 102 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~ 177 (663)
T TIGR02278 102 GTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLA 177 (663)
T ss_pred HHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 45788888887632 333332211 22468899998 99999999999999999999999999999983
No 73
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.54 E-value=2.9e-14 Score=103.06 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHhhhcccccCCC----CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP----PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++..+... .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 84 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~Vil 153 (451)
T cd07146 84 DVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVL 153 (451)
T ss_pred HHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEE
Confidence 4678888877776655433211 23456789999999999999999999999999999999999984
No 74
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.53 E-value=2.6e-14 Score=103.17 Aligned_cols=66 Identities=21% Similarity=0.131 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHhhhcccccCC-C---CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-P---PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..+...... . .+...++.++|+||+++|+|||||+.+.++++++||++||+||-
T Consensus 72 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~ 141 (436)
T cd07135 72 NDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVL 141 (436)
T ss_pred HHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 467888888777643322211 1 13356889999999999999999999999999999999999984
No 75
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=99.53 E-value=3.1e-14 Score=104.31 Aligned_cols=65 Identities=22% Similarity=0.156 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhhhcccccCC---CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDP---PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++..++......... ......+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 75 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIl 142 (493)
T PTZ00381 75 EIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVL 142 (493)
T ss_pred HHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 46666666666543321111 112356889999999999999999999999999999999999874
No 76
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.53 E-value=2.8e-14 Score=102.55 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.++.+.+...+....+...+++++|+||+++|+|||||+....+++++||++||+||-
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIl 151 (450)
T cd07092 86 DNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVL 151 (450)
T ss_pred HHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEE
Confidence 345666666665554332211123356789999999999999999999999999999999999984
No 77
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.53 E-value=2.8e-14 Score=103.66 Aligned_cols=65 Identities=20% Similarity=0.225 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++++..+....++..+....+...++.++|+||+++|+|||||+.+..|++++||++||+||-
T Consensus 105 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vil 169 (477)
T TIGR01722 105 VVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVL 169 (477)
T ss_pred HHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEe
Confidence 35666666666666543322224456788999999999999999999999999999999999984
No 78
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.53 E-value=3.1e-14 Score=102.70 Aligned_cols=64 Identities=22% Similarity=0.170 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+.++.++..+.. .+...++.++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVl 150 (457)
T cd07108 87 LFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVL 150 (457)
T ss_pred HHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 46677777666665544332 34456789999999999999999999999999999999999984
No 79
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.53 E-value=3.1e-14 Score=102.81 Aligned_cols=66 Identities=29% Similarity=0.334 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
..+++|++.++++.++..+. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||--
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlk 160 (462)
T PF00171_consen 95 DFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLK 160 (462)
T ss_dssp HHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccceee
Confidence 46889999999988766565 3577889999999999999999999999999999999999999863
No 80
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.53 E-value=3.6e-14 Score=102.16 Aligned_cols=66 Identities=23% Similarity=0.215 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHhhhcccccCCC----CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP----PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+.+..++..+... .+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~ 156 (453)
T cd07094 87 DTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVL 156 (453)
T ss_pred HHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 4577788888777665433321 24466888999999999999999999999999999999999984
No 81
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.52 E-value=3.3e-14 Score=103.42 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHh-hhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQK-ELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~-~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++ ..++..+.. ....+++++|+|||++|+|||||+.+..|++++||++||+||-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIl 168 (488)
T TIGR02299 104 ENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVL 168 (488)
T ss_pred HHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 346677777663 334433322 3456788999999999999999999999999999999999984
No 82
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.52 E-value=4.5e-14 Score=101.53 Aligned_cols=65 Identities=22% Similarity=0.189 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+++..++.......+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVl 149 (452)
T cd07102 85 RARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVIL 149 (452)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 46677777776655433222234456889999999999999999999999999999999999984
No 83
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=99.52 E-value=2.6e-14 Score=103.57 Aligned_cols=42 Identities=21% Similarity=0.151 Sum_probs=39.3
Q ss_pred ceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 27 YVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 27 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...+++++|+|||++|+|||||+.+..+|+++||++||+||-
T Consensus 87 ~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 128 (439)
T cd07081 87 GGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIF 128 (439)
T ss_pred CceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEE
Confidence 346899999999999999999999999999999999999984
No 84
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.52 E-value=4.5e-14 Score=103.63 Aligned_cols=66 Identities=21% Similarity=0.197 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..++.......+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 135 ~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVl 200 (518)
T cd07125 135 DFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIA 200 (518)
T ss_pred HHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEE
Confidence 457788888877665432112224466889999999999999999999999999999999999874
No 85
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.52 E-value=4.7e-14 Score=101.29 Aligned_cols=65 Identities=26% Similarity=0.298 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++++..+++..++..+...++...+.+++|+||+++|+|||||+....+++++||++||+||-
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIl 150 (451)
T cd07103 86 FLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVL 150 (451)
T ss_pred HHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 45677777776666544332234567889999999999999999999999999999999999984
No 86
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.51 E-value=5.9e-14 Score=101.61 Aligned_cols=66 Identities=17% Similarity=0.119 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHhhhcccccCCC----CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP----PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.++++.++..+... .+...+++++|+||+++|+|||||+.+..+++++||++||++|-
T Consensus 105 ~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vil 174 (473)
T cd07082 105 DYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVF 174 (473)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEE
Confidence 4577888888777665433221 23456889999999999999999999999999999999999984
No 87
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.51 E-value=5.8e-14 Score=101.07 Aligned_cols=66 Identities=20% Similarity=0.207 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhhhcccccCC----CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP----PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+.+..++..+.. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIl 156 (452)
T cd07147 87 DTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVL 156 (452)
T ss_pred HHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEE
Confidence 356777777766655432211 123456788999999999999999999999999999999999984
No 88
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.51 E-value=7e-14 Score=102.84 Aligned_cols=66 Identities=29% Similarity=0.245 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhhcccccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++..... ......++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 120 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIl 187 (524)
T PRK09407 120 LTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 187 (524)
T ss_pred HHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 346778888777655432211 112357889999999999999999999999999999999999984
No 89
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.51 E-value=4.8e-14 Score=106.34 Aligned_cols=66 Identities=29% Similarity=0.170 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHhhh--------cccccCCCCC-ceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKEL--------AEITLDPPPN-YVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++.. ++..+....+ ...++.++|+ |||++|+|||||+.+..++++|||++||+||-
T Consensus 106 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~ 181 (675)
T PRK11563 106 GTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIV 181 (675)
T ss_pred HHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEE
Confidence 35678888776643 3332221112 2246889997 99999999999999999999999999999984
No 90
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=99.51 E-value=5.4e-14 Score=101.61 Aligned_cols=66 Identities=17% Similarity=0.128 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHhhhcccccCCC---CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP---PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..+....... .....++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vvl 133 (443)
T cd07132 65 NEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVI 133 (443)
T ss_pred HHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEE
Confidence 3567777777766443221110 12346889999999999999999999999999999999999984
No 91
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.51 E-value=7.6e-14 Score=100.69 Aligned_cols=66 Identities=24% Similarity=0.187 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHhhhcccccCC-C-CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-P-PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+.+..+...... . .....+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvl 151 (454)
T cd07101 84 IVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVL 151 (454)
T ss_pred HHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 346778877777655432211 1 12356889999999999999999999999999999999999984
No 92
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=99.50 E-value=4.5e-14 Score=104.90 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhcccc---cCCCCC---ceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEIT---LDPPPN---YVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~---~~~~~~---~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++...++.++.. +....+ ...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 156 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl 226 (551)
T TIGR02288 156 AVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV 226 (551)
T ss_pred HHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence 36677777777766533 221111 122347999999999999999999999999999999999984
No 93
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=99.50 E-value=4.8e-14 Score=103.95 Aligned_cols=66 Identities=27% Similarity=0.065 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHhhhcccccCCC--------CCceeEEeeec-CceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPP--------PNYVLLENWNP-LGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|+++++++.++...... ......+.++| +||+++|+|||||+.+..+++++||++||+||-
T Consensus 107 ~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~ 181 (521)
T PRK11903 107 FTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIV 181 (521)
T ss_pred HHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEE
Confidence 4688899888776543221111 12234678899 699999999999999999999999999999984
No 94
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.50 E-value=7.5e-14 Score=100.42 Aligned_cols=66 Identities=26% Similarity=0.313 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhhhccc-ccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEI-TLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.+.+..+.. .+.. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vil 152 (453)
T cd07099 84 EAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVL 152 (453)
T ss_pred HHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 45677887777765443 2211 124467889999999999999999999999999999999999973
No 95
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.50 E-value=6.9e-14 Score=102.90 Aligned_cols=64 Identities=27% Similarity=0.210 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|++.+.+..++..+....+...+++++|+ |||++|+|||||+.+..++++||| +||+||-
T Consensus 138 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVl 202 (522)
T cd07123 138 FLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLW 202 (522)
T ss_pred HHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEE
Confidence 467788887777655433222244678999998 999999999999999999999999 6999983
No 96
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.49 E-value=1.2e-13 Score=101.05 Aligned_cols=66 Identities=29% Similarity=0.250 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHhhhcc--cccC-----CCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAE--ITLD-----PPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~--~~~~-----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+.+..++ ..+. ...+...+++|+|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 119 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIl 191 (496)
T PLN00412 119 DLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVL 191 (496)
T ss_pred HHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEE
Confidence 3467777766665422 2111 0112245788999999999999999999999999999999999984
No 97
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.48 E-value=1.3e-13 Score=101.88 Aligned_cols=64 Identities=22% Similarity=0.179 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|+++++++.++..+....+...++.++|+ ||+++|+|||||+.+..+++++|| +||+||-
T Consensus 138 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVl 202 (533)
T TIGR01236 138 FFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIW 202 (533)
T ss_pred HHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEE
Confidence 467888888777665431112244678899999 999999999999999999999999 8999983
No 98
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.48 E-value=9.6e-14 Score=100.44 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.++++.++.. ....++.++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 104 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~ 163 (466)
T cd07138 104 HLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVL 163 (466)
T ss_pred HHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEE
Confidence 45666666655543321 2245778999999999999999999999999999999999984
No 99
>KOG2452|consensus
Probab=99.48 E-value=4.4e-14 Score=104.42 Aligned_cols=61 Identities=23% Similarity=0.359 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHhhhcccccCCC---CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcC
Q psy3658 3 KALSTSAKRIQKELAEITLDPP---PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGW 63 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaG 63 (74)
.++||||+|.+++.|.++|... ......+++||+|||++|+|||||+++..||.+..|++-
T Consensus 528 ~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~ 591 (881)
T KOG2452|consen 528 QTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ 591 (881)
T ss_pred hHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH
Confidence 4789999999999999887642 234678999999999999999999999999999999874
No 100
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.48 E-value=1.1e-13 Score=108.55 Aligned_cols=66 Identities=20% Similarity=0.120 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHhhhcccccC-CCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLD-PPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++|++.+++..++.... ...+..++.+++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 651 d~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIl 717 (1038)
T PRK11904 651 DFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIA 717 (1038)
T ss_pred HHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEe
Confidence 35688999888876543221 2235577899999999999999999999999999999999999984
No 101
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=99.48 E-value=9.5e-14 Score=101.23 Aligned_cols=42 Identities=21% Similarity=0.229 Sum_probs=39.0
Q ss_pred ceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 27 YVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 27 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...+++++|+|||++|+|||||+.+.++++++||++||+||-
T Consensus 121 ~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVl 162 (465)
T PRK15398 121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVF 162 (465)
T ss_pred ceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEE
Confidence 356788999999999999999999999999999999999984
No 102
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=99.47 E-value=8.1e-14 Score=100.63 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=38.6
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++++|+|||++|+|||||+.+..+++++||++||++|-
T Consensus 90 ~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 130 (429)
T cd07121 90 LTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVF 130 (429)
T ss_pred ceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEE
Confidence 45788999999999999999999999999999999999984
No 103
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.46 E-value=2.3e-13 Score=97.67 Aligned_cols=66 Identities=21% Similarity=0.274 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhhhcccccCC----CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP----PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.+.+..++..+.. ..+...+++++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~ 156 (453)
T cd07149 87 ETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVL 156 (453)
T ss_pred HHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEE
Confidence 346677777666655433321 112345788999999999999999999999999999999999984
No 104
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.46 E-value=2.4e-13 Score=97.89 Aligned_cols=64 Identities=22% Similarity=0.237 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|++.+.+..+...+.. .+...+++++|+||+++|+|||||+....+++++||++||+||-
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIl 150 (455)
T cd07093 87 NFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVL 150 (455)
T ss_pred HHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEe
Confidence 35667776666544433322 24566789999999999999999999999999999999999984
No 105
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.46 E-value=1.1e-13 Score=105.15 Aligned_cols=62 Identities=23% Similarity=0.181 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhhcccccC--CCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLD--PPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|++. .+..++..+. ...+...++.++|+|||++|+||| |+.+. +|++|||++||+||-
T Consensus 373 ~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVl 436 (718)
T PLN02418 373 SIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLL 436 (718)
T ss_pred HHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEE
Confidence 45677766 3444544331 122334688999999999999999 99999 999999999999984
No 106
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=99.45 E-value=1.5e-13 Score=97.80 Aligned_cols=60 Identities=13% Similarity=-0.088 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 5 LSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 5 ~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
++++++.+.+..+...+. +...+++++|+||+++|+|||||+. ..+++++||++||++|-
T Consensus 73 ~~~~a~~~~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vil 132 (397)
T cd07077 73 ERGITASVGHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIF 132 (397)
T ss_pred HHHHHHhcCcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEE
Confidence 444554444443332221 2356899999999999999999999 99999999999999974
No 107
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=99.45 E-value=3.4e-13 Score=96.86 Aligned_cols=66 Identities=20% Similarity=0.145 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhhhccc-ccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEI-TLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++++.+++..+.. .... ..+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvl 133 (426)
T cd07087 65 GEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVL 133 (426)
T ss_pred HHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 45677777766554322 1111 123356889999999999999999999999999999999999984
No 108
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=99.45 E-value=1.5e-13 Score=99.65 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=39.6
Q ss_pred CceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 26 NYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 26 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+...+++++|+||++.|+|||||+.+..|++++||++||+||-
T Consensus 86 ~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVl 128 (436)
T cd07122 86 EKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIF 128 (436)
T ss_pred CCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEE
Confidence 3456889999999999999999999999999999999999984
No 109
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.44 E-value=4.2e-13 Score=96.71 Aligned_cols=65 Identities=18% Similarity=0.148 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhhccc-ccCC--CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEI-TLDP--PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~-~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.++++++.+.+..+.. .... ..+...++.++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~ 133 (433)
T cd07134 66 EINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAIL 133 (433)
T ss_pred HHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 3455665554433321 1111 123456899999999999999999999999999999999999984
No 110
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.44 E-value=3.5e-13 Score=96.96 Aligned_cols=43 Identities=30% Similarity=0.430 Sum_probs=40.0
Q ss_pred CceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 26 NYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 26 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+...+.+++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 105 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vil 147 (446)
T cd07106 105 TRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVL 147 (446)
T ss_pred CceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEE
Confidence 4467899999999999999999999999999999999999984
No 111
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.42 E-value=6.5e-13 Score=96.04 Aligned_cols=41 Identities=27% Similarity=0.301 Sum_probs=38.5
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++++|+||+++|+|||||+....+++++||++||+||-
T Consensus 113 ~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIl 153 (465)
T cd07098 113 RARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVV 153 (465)
T ss_pred eeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEE
Confidence 45788999999999999999999999999999999999984
No 112
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.39 E-value=7.5e-13 Score=97.16 Aligned_cols=38 Identities=26% Similarity=0.319 Sum_probs=35.9
Q ss_pred EeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 31 ENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 31 ~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 156 ~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVl 193 (500)
T TIGR01238 156 FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIA 193 (500)
T ss_pred eeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 36899999999999999999999999999999999984
No 113
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.37 E-value=9.8e-13 Score=96.02 Aligned_cols=39 Identities=36% Similarity=0.716 Sum_probs=36.5
Q ss_pred EEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 30 LENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 30 ~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+..++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 142 ~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVl 180 (480)
T cd07111 142 LAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVL 180 (480)
T ss_pred cccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 456899999999999999999999999999999999984
No 114
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=99.37 E-value=1.5e-12 Score=94.38 Aligned_cols=41 Identities=34% Similarity=0.336 Sum_probs=37.0
Q ss_pred eeEEeeecCceEEEEecCCccHHh--HHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAV--YGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~--~~~k~~~ALaaGNtvV~ 68 (74)
..++.++|+|||++|+|||||+.+ ..+++++||++||+||-
T Consensus 98 ~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVl 140 (454)
T cd07129 98 DLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVV 140 (454)
T ss_pred cceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEE
Confidence 357889999999999999999988 55899999999999984
No 115
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.37 E-value=8.9e-13 Score=100.24 Aligned_cols=40 Identities=25% Similarity=0.190 Sum_probs=36.1
Q ss_pred ceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 27 YVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 27 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...+++++|+|||++|+||| |+.+ .+++++||++||++|-
T Consensus 389 ~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvl 428 (715)
T TIGR01092 389 LILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLL 428 (715)
T ss_pred ceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEE
Confidence 34578999999999999999 9999 6999999999999973
No 116
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.37 E-value=9.4e-13 Score=105.11 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=36.1
Q ss_pred EeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 31 ENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 31 ~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++|+||+++|+|||||+.++.+++++||++||+||.
T Consensus 764 ~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~ 801 (1318)
T PRK11809 764 DTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLA 801 (1318)
T ss_pred ceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEE
Confidence 46899999999999999999999999999999999984
No 117
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.36 E-value=9.4e-13 Score=94.55 Aligned_cols=62 Identities=18% Similarity=0.127 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhhcccccC--CCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLD--PPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|++.++.. ++..+. ..++...+++++|+|||++|+||| | .+..+++++||++||++|-
T Consensus 71 ~~~~~a~~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVl 134 (398)
T TIGR00407 71 GVKDVIELADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVIL 134 (398)
T ss_pred HHHHHhcCCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEE
Confidence 456666666543 443332 113456788999999999999998 7 6788999999999999983
No 118
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=99.36 E-value=2.3e-12 Score=93.18 Aligned_cols=65 Identities=25% Similarity=0.038 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhh--cccccC-C-CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKEL--AEITLD-P-PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~--~~~~~~-~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
.+++|++.+.+.. ++.... . ......+.+++|+|||++|+|||||+.+..+++++||++||++|-
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvl 133 (442)
T cd07084 65 QLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIV 133 (442)
T ss_pred HHHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEE
Confidence 4677777776531 211111 1 112456889999999999999999999999999999999999874
No 119
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=99.30 E-value=9.2e-12 Score=88.68 Aligned_cols=66 Identities=27% Similarity=0.449 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.++++.+........+...+.+++|+||+++|+|||||+....+++++||++||++|-
T Consensus 64 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vil 129 (432)
T cd07078 64 DTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVL 129 (432)
T ss_pred HHHHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEE
Confidence 355666666666655433222234567889999999999999999999999999999999999984
No 120
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=99.30 E-value=1.1e-11 Score=86.73 Aligned_cols=66 Identities=27% Similarity=0.378 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+.++++++.+++..+...+....+...+++++|+||+++|.|||||+....+++++||++||++|-
T Consensus 60 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vil 125 (367)
T cd06534 60 DTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVL 125 (367)
T ss_pred HHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 356677777776655333322335567899999999999999999999999999999999999884
No 121
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=99.29 E-value=4.3e-12 Score=93.04 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=39.6
Q ss_pred CceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 26 NYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 26 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+...+..++|+||+++|+|||||+.+..+|+++||++||+||-
T Consensus 95 ~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIl 137 (488)
T TIGR02518 95 EKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVF 137 (488)
T ss_pred CcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEE
Confidence 4456788999999999999999999999999999999999984
No 122
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.28 E-value=5.6e-12 Score=100.19 Aligned_cols=38 Identities=34% Similarity=0.454 Sum_probs=35.7
Q ss_pred EeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 31 ENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 31 ~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++|+||+++|+|||||+.+..+++++||++||+||-
T Consensus 672 ~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~ 709 (1208)
T PRK11905 672 PGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLA 709 (1208)
T ss_pred ceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEE
Confidence 35789999999999999999999999999999999984
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=99.28 E-value=1.1e-11 Score=95.52 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=39.6
Q ss_pred CceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 26 NYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 26 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+...+++++|+|||++|+|||||+.+..+++++||++||+||-
T Consensus 99 ~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVl 141 (862)
T PRK13805 99 EFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIF 141 (862)
T ss_pred CCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEE
Confidence 3456889999999999999999999999999999999999984
No 124
>KOG2456|consensus
Probab=99.26 E-value=1e-11 Score=89.83 Aligned_cols=41 Identities=24% Similarity=0.236 Sum_probs=38.9
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++..+|+|||++|+|||||+.+....+++||+|||+||-
T Consensus 97 k~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVl 137 (477)
T KOG2456|consen 97 KAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVL 137 (477)
T ss_pred ceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEe
Confidence 56899999999999999999999999999999999999983
No 125
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=99.25 E-value=2.1e-11 Score=90.77 Aligned_cols=39 Identities=18% Similarity=-0.047 Sum_probs=36.5
Q ss_pred EEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 30 LENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 30 ~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...++|+||+++|+|||||+.+..++++++|++||+||-
T Consensus 188 ~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVv 226 (549)
T cd07127 188 TFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIV 226 (549)
T ss_pred eeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEE
Confidence 347899999999999999999999999999999999984
No 126
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=99.24 E-value=7.1e-12 Score=93.71 Aligned_cols=38 Identities=34% Similarity=0.440 Sum_probs=35.3
Q ss_pred EeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 31 ENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 31 ~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++|+|++..|+|||||+.++..+++.||++||+|+.
T Consensus 232 ~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlA 269 (769)
T COG4230 232 LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLA 269 (769)
T ss_pred cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCcccc
Confidence 35679999999999999999999999999999999974
No 127
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=99.18 E-value=3.6e-11 Score=86.53 Aligned_cols=39 Identities=28% Similarity=0.251 Sum_probs=35.2
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++++|+|||++|+||| | .+..+++++||++||++|-
T Consensus 108 ~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVl 146 (417)
T PRK00197 108 RIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVIL 146 (417)
T ss_pred eEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEE
Confidence 5788999999999999987 4 6889999999999999983
No 128
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=99.11 E-value=9.8e-11 Score=84.04 Aligned_cols=40 Identities=30% Similarity=0.248 Sum_probs=35.3
Q ss_pred ceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 27 YVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 27 ~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
...+++++|+|||++|+|| +| .+..+|+++||++||+||-
T Consensus 101 ~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVl 140 (406)
T cd07079 101 LQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVIL 140 (406)
T ss_pred cceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEE
Confidence 3567899999999999997 56 6889999999999999984
No 129
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=98.93 E-value=9.9e-10 Score=79.28 Aligned_cols=40 Identities=25% Similarity=0.080 Sum_probs=36.9
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+++++|+|++++|+|||||+ +..+++++||++||++|-
T Consensus 105 ~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~il 144 (422)
T cd07080 105 GGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLL 144 (422)
T ss_pred CCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEE
Confidence 4578999999999999999999 899999999999999863
No 130
>KOG2454|consensus
Probab=98.79 E-value=7.1e-09 Score=75.50 Aligned_cols=41 Identities=24% Similarity=0.275 Sum_probs=38.4
Q ss_pred eeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 28 VLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 28 ~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..++++||+||.++|.|||||+......+..||-+||.+|-
T Consensus 181 g~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 181 GSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred cceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 35789999999999999999999999999999999999874
No 131
>KOG2453|consensus
Probab=98.35 E-value=1.9e-07 Score=67.15 Aligned_cols=61 Identities=46% Similarity=0.737 Sum_probs=53.6
Q ss_pred HHHHHHhhhcccccCCCCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 8 SAKRIQKELAEITLDPPPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 8 ~a~~a~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
..+..+.+.|..+|++.+++.....+.|+|+|+.|+.||||....-|.-+-++.+||+|+-
T Consensus 126 avglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvW 186 (507)
T KOG2453|consen 126 AVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVW 186 (507)
T ss_pred hhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEe
Confidence 3456677888888887777777889999999999999999999999999999999999873
No 132
>KOG2455|consensus
Probab=97.71 E-value=3.5e-05 Score=57.03 Aligned_cols=64 Identities=25% Similarity=0.179 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhcccccCCCCCceeEEeeecC-ceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 4 ALSTSAKRIQKELAEITLDPPPNYVLLENWNPL-GVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
-||+++..+..+.+.+......+..+..+++|+ |-|++|+||||--.-.....+||| +||+|+-
T Consensus 165 f~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLw 229 (561)
T KOG2455|consen 165 FFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLW 229 (561)
T ss_pred HHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeeccccccChhh-hcceeee
Confidence 367788888888776544434455677888897 999999999997544444445554 7999863
No 133
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=96.90 E-value=0.0018 Score=52.57 Aligned_cols=42 Identities=21% Similarity=0.077 Sum_probs=37.2
Q ss_pred CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 24 PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 24 ~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+++..+....+|.|+++.|+||| .....+++.||++||+++.
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~ 1108 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVV 1108 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEE
Confidence 35778899999999999999999 5677899999999999874
No 134
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=93.14 E-value=0.1 Score=37.88 Aligned_cols=38 Identities=24% Similarity=0.005 Sum_probs=34.2
Q ss_pred eEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEE
Q psy3658 29 LLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLG 67 (74)
Q Consensus 29 ~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV 67 (74)
.+.++.|.|++.+|.|-|-|. +.++.+.-+|.+||..|
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~-~~~~S~~~~lL~gn~ni 118 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPL-VGFYSLVRGLLSGNANI 118 (399)
T ss_pred chhhccCCceEEEEcCCCccc-hHHHHHHHHHHhCCceE
Confidence 577899999999999999997 77788999999999875
No 135
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=74.26 E-value=9.1 Score=28.49 Aligned_cols=41 Identities=27% Similarity=0.274 Sum_probs=27.5
Q ss_pred CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEE
Q psy3658 25 PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLG 67 (74)
Q Consensus 25 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV 67 (74)
.+...+.+|.|+||++.|-= .+|- ...--.+=+|-+||++|
T Consensus 104 nGL~i~~~rvPLGVigvIYE-sRPn-VtvdaaaLclKsGNAvI 144 (417)
T COG0014 104 NGLQIYRVRVPLGVIGVIYE-SRPN-VTVDAAALCLKSGNAVI 144 (417)
T ss_pred CCCEEEEEEccceEEEEEEe-cCCc-cHHHHHHHHHhcCCEEE
Confidence 35677888999999999952 1221 22233344778999987
No 136
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=71.74 E-value=8.8 Score=32.34 Aligned_cols=42 Identities=12% Similarity=-0.228 Sum_probs=33.9
Q ss_pred CCCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEE
Q psy3658 24 PPNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQ 68 (74)
Q Consensus 24 ~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~ 68 (74)
+++..+.....|.|+++.+.+ -..-...+++.++++||.+|-
T Consensus 1176 PTGE~N~l~l~pRg~vLcl~~---~~~~~~~Ql~Aala~Gn~~v~ 1217 (1318)
T PRK11809 1176 PTGERNTYTLLPRERVLCLAD---TEQDALTQLAAVLAVGSQALW 1217 (1318)
T ss_pred CCCCcceeeccCCCcEEEeCC---CHHHHHHHHHHHHHhCCEEEE
Confidence 356788999999999999987 223567789999999999663
No 137
>PRK13769 histidinol dehydrogenase; Provisional
Probab=51.88 E-value=94 Score=22.88 Aligned_cols=45 Identities=11% Similarity=-0.037 Sum_probs=33.7
Q ss_pred CCceeEEeeecCceEEEEecCCccHHhHHHHHhhHhhcCCeEEEEe
Q psy3658 25 PNYVLLENWNPLGVVGIISAFNFPVAVYGWNAAIALPGWQVLGQVA 70 (74)
Q Consensus 25 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~k~~~ALaaGNtvV~~~ 70 (74)
++...-.++.|+--+++..|--||. ...+...||-.+|+.=|.+.
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~ 127 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVV 127 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEe
Confidence 3556677899999999999965653 44456789999998766543
No 138
>PF09129 Chol_subst-bind: Cholesterol oxidase, substrate-binding; InterPro: IPR015213 The substrate-binding domain found in cholesterol oxidase is composed of an eight-stranded mixed beta-pleated sheet and six alpha-helices. This domain is positioned over the isoalloxazine ring system of the FAD cofactor bound by the FAD-binding domain (IPR006094 from INTERPRO) and forms the roof of the active site cavity, allowing for catalysis of oxidation and isomerisation of cholesterol to cholest-4-en-3-one []. ; PDB: 3JS8_A 1I19_B 2I0K_A.
Probab=45.13 E-value=24 Score=25.35 Aligned_cols=63 Identities=10% Similarity=-0.038 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHhhhcccccCCCCC---ceeEEeeecCceEEEEecCCccHHhHH----HHHhhHhhcCCe
Q psy3658 3 KALSTSAKRIQKELAEITLDPPPN---YVLLENWNPLGVVGIISAFNFPVAVYG----WNAAIALPGWQV 65 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~~~~---~~~~~~~~P~GVv~~I~PwN~P~~~~~----~k~~~ALaaGNt 65 (74)
++|..|-+.+-+.+.--.|..+.. .....-..|.+.-..-.|+|||+.-.. ..+...+..|+.
T Consensus 24 RT~~sfld~sGR~EaIWfPFT~~PWLKVWs~sP~kP~~SR~V~~PyNYpFSD~ip~~vtDLi~~i~~g~~ 93 (321)
T PF09129_consen 24 RTFASFLDRSGRVEAIWFPFTDNPWLKVWSVSPTKPLLSREVTGPYNYPFSDNIPEPVTDLIGQIVAGNP 93 (321)
T ss_dssp S-HHHHHHHCSEEEEEE-TT-SS-EEEEEEE-SS--TTSEE-SSS---HHHHS--HHHHHHHHHHHTT-G
T ss_pred ccHHHHHhhcCcEEEEEecCCCCcceeeeccCCCCCCcccccCCCCCCCccccccHHHHHHHHHHHcCCc
Confidence 566666666555544434433211 133445678888888999999997644 344555556653
No 139
>KOG3768|consensus
Probab=39.76 E-value=23 Score=28.13 Aligned_cols=26 Identities=27% Similarity=0.333 Sum_probs=20.2
Q ss_pred eeEEeeecC--ceEEEEecCCccHHhHH
Q psy3658 28 VLLENWNPL--GVVGIISAFNFPVAVYG 53 (74)
Q Consensus 28 ~~~~~~~P~--GVv~~I~PwN~P~~~~~ 53 (74)
+.+....++ ||-+.+.|||||.++..
T Consensus 368 FGyLka~t~~t~V~L~vmpyNyP~Llpl 395 (888)
T KOG3768|consen 368 FGYLKANTLGTGVTLIVMPYNYPMLLPL 395 (888)
T ss_pred cceeeeccCcCceEEEEecccchHHHHH
Confidence 556666665 68888999999998765
No 140
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=33.84 E-value=2e+02 Score=21.37 Aligned_cols=66 Identities=20% Similarity=0.114 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHhhhcccccCC-----CCCceeEEeeecCceEEEEecCC---ccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-----PPNYVLLENWNPLGVVGIISAFN---FPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
+.|+...+..++++..+.+.. .++...-.++.|+.-+++..|-- ||.. ..+...||-.+|+.=|.+
T Consensus 55 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~ 128 (390)
T cd06572 55 EAIELAAENIRAFHEAQLPKDWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPST-VLMLAIPAKVAGVKEIVV 128 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHH-HHHhhcchhhcCCCeEEE
Confidence 456666667776665544431 13556678899999999999964 6543 344578898999876554
No 141
>smart00786 SHR3_chaperone ER membrane protein SH3. This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) PUBMED:15623581. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=32.12 E-value=3.4 Score=27.77 Aligned_cols=18 Identities=28% Similarity=0.274 Sum_probs=15.5
Q ss_pred hhHhhcCCeEEEEeeecC
Q psy3658 57 AIALPGWQVLGQVALVGV 74 (74)
Q Consensus 57 ~~ALaaGNtvV~~~~~~~ 74 (74)
..-|+++|+++.+.|+||
T Consensus 130 l~VlAASn~Il~~vLvGV 147 (196)
T smart00786 130 LAVLAASNTILLFVLVGV 147 (196)
T ss_pred HHHHhccchhHHHHHHHH
Confidence 446899999999999986
No 142
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=30.26 E-value=2.5 Score=28.37 Aligned_cols=18 Identities=28% Similarity=0.300 Sum_probs=15.0
Q ss_pred hhHhhcCCeEEEEeeecC
Q psy3658 57 AIALPGWQVLGQVALVGV 74 (74)
Q Consensus 57 ~~ALaaGNtvV~~~~~~~ 74 (74)
..-|+++|+++.++|+||
T Consensus 130 l~VlAASn~Ii~~~LvGV 147 (196)
T PF08229_consen 130 LRVLAASNTIIALVLVGV 147 (196)
T ss_pred HHHHHHhhHHHHHHHHHH
Confidence 345889999999999986
No 143
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=29.03 E-value=2.5e+02 Score=20.96 Aligned_cols=66 Identities=21% Similarity=0.103 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHhhhcccccCC-----CCCceeEEeeecCceEEEEecC---CccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-----PPNYVLLENWNPLGVVGIISAF---NFPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
+.++...+..++++..+.+.. .++...-.++.|+.-+++..|. -||.. ..+...||-.+|+.=|.+
T Consensus 51 ~ai~~A~~~I~~fh~~q~~~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pSt-vLM~aiPAkvAGV~~Iv~ 124 (393)
T TIGR00069 51 EALELAAENIRAFHEAQLPRSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVV 124 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHH-HHHhhcchhhcCCCeEEE
Confidence 345566666666654443322 2344556789999999999998 46653 344567898999876554
No 144
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=28.93 E-value=27 Score=21.93 Aligned_cols=11 Identities=9% Similarity=0.519 Sum_probs=8.4
Q ss_pred ecCCccHHhHH
Q psy3658 43 SAFNFPVAVYG 53 (74)
Q Consensus 43 ~PwN~P~~~~~ 53 (74)
+||||.+.-.+
T Consensus 33 tpWNysiL~Ls 43 (125)
T PF15048_consen 33 TPWNYSILALS 43 (125)
T ss_pred CCcchHHHHHH
Confidence 89999876543
No 145
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=27.94 E-value=2.6e+02 Score=21.00 Aligned_cols=66 Identities=21% Similarity=0.191 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHhhhcccccCC-----CCCceeEEeeecCceEEEEecC---CccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP-----PPNYVLLENWNPLGVVGIISAF---NFPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
..++...+.+++++..+.+.. .++...-.++.|+--|++..|. -||. ...+...||-.+|+.=|.+
T Consensus 83 ~ai~~A~~~I~~Fh~~q~~~~~~~~~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~ 156 (425)
T PRK00877 83 EALEEAAENIRAFHEAQKPESWDVETAPGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVM 156 (425)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEecCCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEE
Confidence 345566666666655444421 2344556789999999999997 4665 3445678899999866554
No 146
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=27.90 E-value=2.6e+02 Score=20.92 Aligned_cols=66 Identities=18% Similarity=0.145 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHhhhcccccCC------CCCceeEEeeecCceEEEEec---CCccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 3 KALSTSAKRIQKELAEITLDP------PPNYVLLENWNPLGVVGIISA---FNFPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 3 ~~~~~~a~~a~~~~~~~~~~~------~~~~~~~~~~~P~GVv~~I~P---wN~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
+.|+...+..++++..+.+.. .++...-.++.|+.-|++..| .-||.. ..+...||-.+|..=|.+
T Consensus 68 ~Ai~~A~~~I~~fh~~q~~~~~~~~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pSt-vlM~aiPA~vAGV~~Iv~ 142 (412)
T PF00815_consen 68 EAIEQAAENIRAFHEAQLPKKDWEVETEPGVILGQRYRPIERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVV 142 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-----EEEEEETTEEEEEEEEE-SEEEEE---SSS--THH-HHHHHHHHHHHT-SEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEecCCcEEEEEEEEhhheEEEccCCCCCccHH-HHHcccchhhcCCCeEEE
Confidence 345666666666665544321 135556778999999999999 456654 344678899999765554
No 147
>PLN02926 histidinol dehydrogenase
Probab=26.58 E-value=2.8e+02 Score=20.89 Aligned_cols=65 Identities=15% Similarity=-0.025 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhhhcccccC------CCCCceeEEeeecCceEEEEecC---CccHHhHHHHHhhHhhcCCeEEEE
Q psy3658 4 ALSTSAKRIQKELAEITLD------PPPNYVLLENWNPLGVVGIISAF---NFPVAVYGWNAAIALPGWQVLGQV 69 (74)
Q Consensus 4 ~~~~~a~~a~~~~~~~~~~------~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~k~~~ALaaGNtvV~~ 69 (74)
.|+...+..++++..+.+. ..++...-.++.|+.-+++..|. -||. ...+...||-.+|+.=|.+
T Consensus 83 ai~~A~~nI~~fh~~q~~~~~~~~~~~~Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~ 156 (431)
T PLN02926 83 AFDVAYDNIYAFHLAQKSTEKLEVETMPGVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVL 156 (431)
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEecCCCeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEE
Confidence 4555555555554433221 12344556789999999999998 4665 3445678899999765544
No 148
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=23.20 E-value=31 Score=20.14 Aligned_cols=8 Identities=38% Similarity=1.082 Sum_probs=6.3
Q ss_pred EecCCccH
Q psy3658 42 ISAFNFPV 49 (74)
Q Consensus 42 I~PwN~P~ 49 (74)
-+|||||+
T Consensus 48 atPynYPv 55 (84)
T PF14987_consen 48 ATPYNYPV 55 (84)
T ss_pred CCCccCcc
Confidence 37899996
No 149
>PF04370 DUF508: Domain of unknown function (DUF508) ; InterPro: IPR007465 This is a family of uncharacterised proteins from Caenorhabditis elegans.
Probab=23.08 E-value=1.1e+02 Score=19.72 Aligned_cols=20 Identities=15% Similarity=0.041 Sum_probs=17.2
Q ss_pred HHHHhhHhhcCCeEEEEeee
Q psy3658 53 GWNAAIALPGWQVLGQVALV 72 (74)
Q Consensus 53 ~~k~~~ALaaGNtvV~~~~~ 72 (74)
..|-..-||+-|+|+|.+|+
T Consensus 127 l~KtLAqLA~t~si~QFsLI 146 (156)
T PF04370_consen 127 LGKTLAQLAATNSIVQFSLI 146 (156)
T ss_pred HHHHHHHHhccCceEEEEEE
Confidence 35778899999999999986
Done!