BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3659
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/35 (91%), Positives = 34/35 (97%)
Query: 1 MSKALSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
+S+AL TSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 80 ISRALGTSAKRIQKELAEITLDPPPNCSAGPKGDN 114
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 2 SKALSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
SK LSTSAKRIQKELA+ITLDPPPNCSAGPKGDN
Sbjct: 42 SKLLSTSAKRIQKELADITLDPPPNCSAGPKGDN 75
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 2 SKALSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
SK LSTSAKRIQKELA+ITLDPPPNCSAGPKGDN
Sbjct: 42 SKLLSTSAKRIQKELADITLDPPPNCSAGPKGDN 75
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 5 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
LSTSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 59 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 89
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 5 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
LSTSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 59 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 89
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 5 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
LSTSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 59 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 89
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 5 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
LSTSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 53 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 83
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/31 (100%), Positives = 31/31 (100%)
Query: 5 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
LSTSAKRIQKELAEITLDPPPNCSAGPKGDN
Sbjct: 53 LSTSAKRIQKELAEITLDPPPNCSAGPKGDN 83
>sp|Q9LJD7|COP10_ARATH Constitutive photomorphogenesis protein 10 OS=Arabidopsis
thaliana GN=COP10 PE=1 SV=1
Length = 182
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 4 ALSTSAKRIQKELAEITLDPPPNCSAGPKGDN 35
++S S KRIQ+E+AE+ +DPPP+CSAGPKGDN
Sbjct: 33 SVSASGKRIQREMAELNIDPPPDCSAGPKGDN 64
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRIQKEL+++ DPP +CSAGP GD+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDD 29
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRIQKEL+++ DPP +CSAGP GD+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDD 29
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRIQKEL+++ DPP +CSAGP GD+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDD 29
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRIQKEL+++ DPP +CSAGP GD+
Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDD 29
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBC5 PE=1
SV=1
Length = 148
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 7 TSAKRIQKELAEITLDPPPNCSAGPKGDN 35
+S+KRI KEL+++ DPP +CSAGP GD+
Sbjct: 2 SSSKRIAKELSDLGRDPPASCSAGPVGDD 30
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 7 TSAKRIQKELAEITLDPPPNCSAGPKGDN 35
+S+KRI KEL+++ DPP +CSAGP GD+
Sbjct: 2 SSSKRIAKELSDLERDPPTSCSAGPVGDD 30
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRIQKEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIQKELTDLQRDPPAQCSAGPVGDD 29
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRIQKEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD 29
>sp|P43102|UBC4_CANAX Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4
PE=2 SV=1
Length = 147
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
S KRI KEL+++ DPP +CSAGP GD+
Sbjct: 2 SLKRINKELSDLGRDPPSSCSAGPVGDD 29
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp.
japonica GN=UBC5A PE=2 SV=1
Length = 147
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRIQKEL ++ DPP +CSAGP G++
Sbjct: 2 ASKRIQKELKDLQKDPPTSCSAGPVGED 29
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI KEL+++ DPP CSAGP GD+
Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGDD 29
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL+++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDD 29
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL+++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDD 29
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL+++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDD 29
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis
GN=UBE2D3 PE=2 SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL+++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDD 29
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL+++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELSDLARDPPAQCSAGPVGDD 29
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI +ELA++ DPP +CSAGP GD+
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDD 29
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4
PE=1 SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRIQKEL ++ DPP CSAGP G++
Sbjct: 2 ALKRIQKELMDLQRDPPAQCSAGPVGED 29
>sp|Q9FKT3|UBC30_ARATH Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana
GN=UBC30 PE=2 SV=1
Length = 148
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP GD+
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD 29
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2
PE=1 SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRIHKELNDLARDPPAQCSAGPVGDD 29
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ KRI KEL ++ DPP CSAGP GD+
Sbjct: 2 ALKRINKELQDLGRDPPAQCSAGPVGDD 29
>sp|P70711|U2D2B_RAT Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus
GN=Ube2d2b PE=1 SV=1
Length = 147
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI KEL ++ DPP CSAGP G++
Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGED 29
>sp|Q6ZWY6|U2D2B_MOUSE Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b
PE=2 SV=1
Length = 147
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI KEL ++ DPP CSAGP G++
Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGED 29
>sp|Q9UVR2|UBC1_MAGO7 Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=UBC1 PE=3
SV=2
Length = 147
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI KEL ++ DPP +CSAGP G++
Sbjct: 4 KRINKELTDLGRDPPSSCSAGPVGED 29
>sp|O74196|UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum
gloeosporioides GN=UBC1 PE=2 SV=1
Length = 147
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 10 KRIQKELAEITLDPPPNCSAGPKGDN 35
KRI KEL ++ DPP +CSAGP G++
Sbjct: 4 KRINKELTDLGRDPPSSCSAGPVGED 29
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana
GN=UBC11 PE=2 SV=2
Length = 148
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP NCSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAED 29
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana
GN=UBC29 PE=2 SV=1
Length = 148
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ +RI KEL E+ DPP +CSAGP G++
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGED 29
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum
PE=2 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana
GN=UBC28 PE=2 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp.
japonica GN=UBC5B PE=2 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana
GN=UBC10 PE=1 SV=1
Length = 148
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
++KRI KEL ++ DPP +CSAGP ++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED 29
>sp|Q8IWF7|U2D2L_HUMAN Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo
sapiens GN=UBE2DNL PE=5 SV=1
Length = 75
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
+ K I KE E+ DP P+CSAGP D+
Sbjct: 2 ALKLIHKEFLELARDPQPHCSAGPVWDD 29
>sp|Q6BYG4|UBC6_DEBHA Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=UBC6 PE=3 SV=2
Length = 242
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDN 35
S KR+ KE ITL+PPP SA P +N
Sbjct: 6 SQKRLTKEYKAITLNPPPYVSAKPNDEN 33
>sp|Q9C9Y7|UBC12_ARATH Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis
thaliana GN=UBC12 PE=2 SV=1
Length = 149
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 8 SAKRIQKELAEITLDPPPNCSAGPKGDNPGIPCTTT-----RARYALDIFTVKQGLRYHF 62
++KRI +EL ++ PP NCSAGP + T + Y+ +FTV +
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 63 CLRPER 68
+P +
Sbjct: 62 PFKPPK 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,283,644
Number of Sequences: 539616
Number of extensions: 972616
Number of successful extensions: 1968
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 57
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)