RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy366
(734 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 121 bits (306), Expect = 7e-32
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 294 LTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSF 353
++ + E+ Y C CGK + +L+ H + H K + C C KSF
Sbjct: 1 ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSF 59
Query: 354 VNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHR 413
++ L H+ H+ E+ + C CG SF QR L AH++ H E + C C + F +
Sbjct: 60 SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQ 117
Query: 414 NSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSH 473
+ L +H RTH+ +PYKC C + F ++ H+R H+ +PY+C C SF R
Sbjct: 118 LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDA 176
Query: 474 LKQHGKTH 481
L H +TH
Sbjct: 177 LNVHQRTH 184
Score = 92.9 bits (232), Expect = 6e-22
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 542 FSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKS 600
S A G + Y C +CGK S + LA H + H K + C C KS
Sbjct: 3 EFGSSSSVAQAALE---PGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKS 58
Query: 601 FFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFV 660
F +L +H H+ +K + C CG SF QR L +H++ + E Y C CGK F
Sbjct: 59 FSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPY--ACPECGKSFS 116
Query: 661 KNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTAR 720
+ L H + H+ +PYKC CG F ++ H Q H+ +PY C C +F
Sbjct: 117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRD 175
Query: 721 ALKQHGRTH 729
AL H RTH
Sbjct: 176 ALNVHQRTH 184
Score = 86.0 bits (214), Expect = 2e-19
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C +CGK F+ S LA H + H K + C CGKSF +L +H H+ +K + C
Sbjct: 24 CPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE 82
Query: 121 CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICG 180
CG SF QR+ L +H++ + E Y C CGK F + L H + H+ +PYKC CG
Sbjct: 83 CGKSFSQRANLRAHQRTHTGEKPY--ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140
Query: 181 HGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQHEKKH 224
F ++ H++ H C C +F L H++ H
Sbjct: 141 KSFSREDNLHTHQR------THTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 82.9 bits (206), Expect = 2e-18
Identities = 64/242 (26%), Positives = 92/242 (38%), Gaps = 58/242 (23%)
Query: 380 SFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHF 439
S + A L E + C C + F R+ L H RTH+ +PYKC C + F
Sbjct: 2 SEFGSSSSVAQAALEPG--EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59
Query: 440 KFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTC 497
D+ H+R H+ +PY+C C SF + ++L+ H +TH KP
Sbjct: 60 SDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP------------- 105
Query: 498 HQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLP 557
Y+C +C FS + +R H +TH
Sbjct: 106 -----------------------------------YACPECGKSFSQLAHLRAHQRTH-- 128
Query: 558 AIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSE 616
G + Y C +CGK S L H + H K + C C KSF L H H+
Sbjct: 129 -TGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186
Query: 617 QK 618
+K
Sbjct: 187 KK 188
Score = 75.6 bits (187), Expect = 6e-16
Identities = 66/265 (24%), Positives = 93/265 (35%), Gaps = 86/265 (32%)
Query: 411 FHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKR 470
+S + +PY C C + SF R
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGK-----------------------------SFSR 33
Query: 471 SSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQD 528
S HL +H +TH KP
Sbjct: 34 SDHLAEHQRTHTGEKP-------------------------------------------- 49
Query: 529 NKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHL 587
Y C +C FS K D+ +H +TH G + Y C +CGK S L H + H
Sbjct: 50 ----YKCPECGKSFSDKKDLTRHQRTH---TGEKPYKCPECGKSFSQRANLRAH-QRTHT 101
Query: 588 KIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELI 647
K ++C C KSF LA LR H H+ +K + C CG SF + L +H++ + E
Sbjct: 102 GEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKP 161
Query: 648 YKFECTLCGKKFVKNYSLYEHMKRH 672
Y +C CGK F + +L H + H
Sbjct: 162 Y--KCPECGKSFSRRDALNVHQRTH 184
Score = 73.6 bits (182), Expect = 3e-15
Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 68 FTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQ 127
S S + K + C CGKSF + L +H H+ +K + C CG SF
Sbjct: 3 EFGSSSSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 128 RSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNY 187
+ L H++ + E YK C CGK F + +L H + H+ +PY C CG F
Sbjct: 62 KKDLTRHQRTHTGEKPYK--CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA 119
Query: 188 DMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQHEKKH 224
+ H++ H C C +F L H++ H
Sbjct: 120 HLRAHQR------THTGEKPYKCPECGKSFSREDNLHTHQRTH 156
Score = 69.8 bits (172), Expect = 7e-14
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 600 SFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKF 659
S F + + + +K + C CG SF + L H++ + E Y +C CGK F
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPY--KCPECGKSF 59
Query: 660 VKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTA 719
L H + H+ +PYKC CG F ++ H Q H+ +PY C C +F
Sbjct: 60 SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQL 118
Query: 720 RALKQHGRTH 729
L+ H RTH
Sbjct: 119 AHLRAHQRTH 128
Score = 67.5 bits (166), Expect = 4e-13
Identities = 54/244 (22%), Positives = 85/244 (34%), Gaps = 71/244 (29%)
Query: 96 SFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKF 155
S F +S + + +K + C CG SF + L H++ + E Y +C CGK F
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPY--KCPECGKSF 59
Query: 156 VKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSA 209
L H + H+ +PYKC CG F ++ H++ H C C
Sbjct: 60 SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR------THTGEKPYACPECGK 113
Query: 210 TFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHI 269
+F L+ H++ H T E KC C ++F + +L
Sbjct: 114 SFSQLAHLRAHQRTH-------------TGEKPYKCPE-------CGKSFSREDNLH--- 150
Query: 270 WKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASN 329
+H +TH+ E+ Y C CGK
Sbjct: 151 ----------------------------------THQRTHTGEKPYKCPECGKSFSRRDA 176
Query: 330 LSLH 333
L++H
Sbjct: 177 LNVH 180
Score = 64.0 bits (157), Expect = 7e-12
Identities = 64/251 (25%), Positives = 93/251 (37%), Gaps = 68/251 (27%)
Query: 124 SFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGF 183
S S + E Y C CGK F ++ L EH + H+ +PYKC CG
Sbjct: 2 SEFGSSSSVAQAALEPGEKPY--ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGK-- 57
Query: 184 KLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGC 243
+F + L +H++ H T E
Sbjct: 58 --------------------------SFSDKKDLTRHQRTH-------------TGEKPY 78
Query: 244 KCNRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILET----YNILSQCPVCKLTFTDK 299
KC C ++F + +LRAH Q T Y CP C +F+
Sbjct: 79 KCPE-------CGKSFSQRANLRAH--------QRT-HTGEKPY----ACPECGKSFSQL 118
Query: 300 RKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGL 359
L++H +TH+ E+ Y C CGK NL H + H K + C C KSF R L
Sbjct: 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDAL 177
Query: 360 RLHKLIHSEER 370
+H+ H+ ++
Sbjct: 178 NVHQRTHTGKK 188
Score = 37.8 bits (89), Expect = 0.005
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
C +CGK F+ +L H + H K + C CGKSF L H H+ +K
Sbjct: 136 CPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 91.9 bits (229), Expect = 2e-21
Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 12/186 (6%)
Query: 305 HLKTHSIERSYTC--HHCGKQLCGASNLSLHIKSVHLKIKDHSCD--VCDKSFVNRAGLR 360
+ + Y C CG L H H K C C+K F + L
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 361 LHKLIHSEERGFVCD--LCGASFKQRPALWAHKKLHDAKLEYKFKCIL--CDRKFHRNSK 416
H L H+ E+ F CD C F + + H + C C + F ++++
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 417 LNSHMRTHSDVRPYKC--DICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHL 474
L H +H+ PY+C + C++ F ++ H++ VH+ + CS K +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLY 180
Query: 475 KQHGKT 480
+H
Sbjct: 181 LKHVAE 186
Score = 85.0 bits (211), Expect = 4e-19
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHSCD-- 347
C + KL++HL H+ E+ + C C K +L+ H H K+ +CD
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTGEKNFTCDSD 78
Query: 348 VCDKSFVNRAGLRLHKLIHSEERG--FVCDL--CGASFKQRPALWAHKKLHDAKLEYKFK 403
CD F +A ++ H + +VC CG +FK+ L H+ H +L Y+
Sbjct: 79 GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138
Query: 404 CILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVH 453
CD++F S+L H + H+ K D C K H H
Sbjct: 139 HEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 77.6 bits (192), Expect = 1e-16
Identities = 48/177 (27%), Positives = 68/177 (38%), Gaps = 13/177 (7%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCD--ICGKSFFAASELKQHSFIHSEQ 113
C CG + + L H C H K C C K F + L +HS H+ +
Sbjct: 14 ICS--FADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 114 KGFVCD--LCGASFKQRSCLWSHKKWNHEELSYKFECTL--CGKKFVKNYSLYEHMKRHS 169
K F CD C F ++ + H H + C CGK F K+ L H H+
Sbjct: 71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130
Query: 170 DVRPYKC--DICGHGFKLNYDMLRHKQDVHS-NIIHNCNLCSATFKTARGLKQHEKK 223
PY+C + C F L + RH + VH+ + CS KT +H +
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186
Score = 72.6 bits (179), Expect = 6e-15
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 12/176 (6%)
Query: 563 YTCD--QCGKQLSYAKTLANHIKGVHLKIKKHSCE--NCAKSFFSLAELRQHSPVHSEQK 618
Y C CG + L H+ H K C+ C K F SL L +HS H+ +K
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71
Query: 619 SFVCE--LCGASFKQRTCLWSHKKWNHEELIYKFECTL--CGKKFVKNYSLYEHMKRHSD 674
+F C+ C F + + H H I + C CGK F K+ L H H+
Sbjct: 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131
Query: 675 VRPYKC--DICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRT 728
PY+C + C F L + RH + VH+ CS KT +H
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186
Score = 72.2 bits (178), Expect = 8e-15
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 61 CDQ--CGKHFTSSQSLARHIKCVHLKIKHHWCD--ICGKSFFAASELKQHSFIHSEQKG- 115
C + C K FTS L RH H K+ CD C F + +K+H K
Sbjct: 45 CKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKIC 103
Query: 116 -FVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVR 172
+VC CG +FK+ + L H+ + ++L Y+ C K+F L H K H+
Sbjct: 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 163
Query: 173 PYKCDICGHGFKLNYDMLRHKQDVH 197
K D C K L+H + H
Sbjct: 164 CKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 68.0 bits (167), Expect = 3e-13
Identities = 47/234 (20%), Positives = 73/234 (31%), Gaps = 54/234 (23%)
Query: 420 HMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPYQCT--LCSASFKRSSHLK 475
+ Y C C + N+ +Q H H+ +P+ C C F HL
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 476 QHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSC 535
+H TH T E C+
Sbjct: 62 RHSLTH---------------------TGEKNFTCDS----------------------- 77
Query: 536 EQCKVQFSCKSDMRKHAKTHLPAIGRSYTC--DQCGKQLSYAKTLANHIKGVHLKIKKHS 593
+ C ++F+ K++M+KH Y C + CGK L H H + +
Sbjct: 78 DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYE 136
Query: 594 C--ENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEE 645
C E C K F + L++H VH+ + C K T H H++
Sbjct: 137 CPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190
Score = 67.6 bits (166), Expect = 3e-13
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 15/180 (8%)
Query: 533 YSCE--QCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQ--CGKQLSYAKTLANHIKGVHL 587
Y C C ++ ++ H H G + + C + C K + L H H
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKH---TGEKPFPCKEEGCEKGFTSLHHLTRHSL-THT 68
Query: 588 KIKKHSCE--NCAKSFFSLAELRQHSPVHSEQKS--FVCEL--CGASFKQRTCLWSHKKW 641
K +C+ C F + A +++H K +VC CG +FK+ L H+
Sbjct: 69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128
Query: 642 NHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 701
+ ++L Y+ C K+F L H K H+ K D C K L+H + H
Sbjct: 129 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 67.6 bits (166), Expect = 4e-13
Identities = 42/207 (20%), Positives = 74/207 (35%), Gaps = 29/207 (14%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD--ICEQHFKFNYDIQ 446
K L Y C +++N KL +H+ H+ +P+ C CE+ F + +
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 447 MHKRCVHSNIRPYQCT--LCSASFKRSSHLKQHGKTHIKPEHDLKT--KMNLFTCHQCQS 502
H H+ + + C C F +++K+H K+ ++ CH
Sbjct: 62 RHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRF--------HNIKICVYVCHFEN- 111
Query: 503 TEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQ--CKVQFSCKSDMRKHAKTHL-PAI 559
C K L H + ++ Y C C +FS S +++H K H
Sbjct: 112 -------CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 164
Query: 560 GRSYTCDQCGKQLSYAKTLANHIKGVH 586
+ +C GK + H+ H
Sbjct: 165 KKDDSCSFVGKTWT---LYLKHVAECH 188
Score = 59.5 bits (145), Expect = 2e-10
Identities = 38/190 (20%), Positives = 60/190 (31%), Gaps = 40/190 (21%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCD--LCGASFKQRSCLWSHKKWNHEELSYKFECTL 150
CG ++ +L+ H H+ +K F C C F L H + E ++ +
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 151 CGKKFVKNYSLYEHMKRHSD--VRPYKCDI--CGHGFKLNYDMLRHKQDVHSNIIH---- 202
C +F ++ +H R + + Y C CG FK + + H+ H
Sbjct: 80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ------FSHTQQL 133
Query: 203 ----NCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSET 258
C F LK+HEK H K + CS
Sbjct: 134 PYECPHEGCDKRFSLPSRLKRHEKVH-------------AGYPCKKDDS-------CSFV 173
Query: 259 FKSKPSLRAH 268
K+ H
Sbjct: 174 GKTWTLYLKH 183
Score = 53.0 bits (128), Expect = 4e-08
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 10/129 (7%)
Query: 105 QHSFIHSEQKGFVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLY 162
+ K ++C CGA++ + L +H + E + + C K F + L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 163 EHMKRHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHS---NIIHNCNL--CSATFKTAR 215
H H+ + + CD C F +M +H ++ C+ C FK
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHN 120
Query: 216 GLKQHEKKH 224
LK H+ H
Sbjct: 121 QLKVHQFSH 129
Score = 48.7 bits (117), Expect = 1e-06
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWC--DICGKSFFAASELKQHSFIHSEQ 113
C + CGK F L H + H + + C + C K F S LK+H +H+
Sbjct: 106 VCH--FENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162
Query: 114 KGFVCDLCGASFKQRSCLWSHKKWNHEE 141
D C K + H H++
Sbjct: 163 PCKKDDSCSFVGKTWTLYLKHVAECHQD 190
Score = 48.0 bits (115), Expect = 2e-06
Identities = 41/215 (19%), Positives = 65/215 (30%), Gaps = 59/215 (27%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHSNII 201
Y CG + KN+ L H+ +H+ +P+ C C GF + + RH +
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS------LT 66
Query: 202 H------NCN--LCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGC--KCNRQLLQ 251
H C+ C F T +K+H + C C+
Sbjct: 67 HTGEKNFTCDSDGCDLRFTTKANMKKHFNRF-------------HNIKICVYVCH----- 108
Query: 252 CSLCSETFKSKPSLRAHI--------WKCQMEPQTILETYNILSQCPVCKLTFTDKRKLK 303
C + FK L+ H ++C E C F+ +LK
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG---------------CDKRFSLPSRLK 153
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
H K H+ C + H+ H
Sbjct: 154 RHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 78.5 bits (194), Expect = 3e-17
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 349 CDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH-------DAKLEYK 401
S K I + C +F L H + + + Y
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPY 459
+C + F KL +H+R H+ +P+ C C + F + ++++HKR H+ +P+
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPF 121
Query: 460 QCTL--CSASFKRSSHLKQHGKTH 481
+C C F SS K+H H
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVH 145
Score = 75.4 bits (186), Expect = 4e-16
Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 10/149 (6%)
Query: 295 TFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH--------LKIKDHSC 346
+ ++ S + S C + L H+ H C
Sbjct: 6 SGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEEC 65
Query: 347 DVCDKSFVNRAGLRLHKLIHSEERGFVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKC 404
KSF + L H +H+ E+ F C CG F + L HK+ H + +K +
Sbjct: 66 PREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF 125
Query: 405 ILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
CDR+F +S HM H+ +
Sbjct: 126 EGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 70.8 bits (174), Expect = 2e-14
Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 12/145 (8%)
Query: 596 NCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSH-------KKWNHEELIY 648
+ S + + + Q S + C +F L +H + + Y
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 649 KFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHKQDVHSTTRP 706
EC GK F Y L H++ H+ +P+ C CG F + ++ H + H+ +P
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKP 120
Query: 707 YLCTI--CSATFKTARALKQHGRTH 729
+ C C F + K+H H
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMHVH 145
Score = 67.3 bits (165), Expect = 2e-13
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 61 CDQCGKHFTSSQSLARHI--------KCVHLKIKHHWCDICGKSFFAASELKQHSFIHSE 112
C + F++ L H+ + + C GKSF A +L H +H+
Sbjct: 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87
Query: 113 QKGFVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSD 170
+K F C CG F + L HK+ + E +K E C ++F + +HM H+
Sbjct: 88 EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147
Query: 171 VRPYKCD 177
+
Sbjct: 148 DKSGPSS 154
Score = 64.6 bits (158), Expect = 2e-12
Identities = 42/192 (21%), Positives = 62/192 (32%), Gaps = 62/192 (32%)
Query: 377 CGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYK----- 431
G+S + + K + +A + CDR F +L +H+ P +
Sbjct: 3 SGSSGQPIKQELSCKWIDEA--QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 432 ----CDICEQHFKFNYDIQMHKRCVHSNIRPYQCTL--CSASFKRSSHLKQHGKTHI--K 483
C + FK Y + H R VH+ +P+ C C F RS +LK H +TH K
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 119
Query: 484 PEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFS 543
P F C E C +F+
Sbjct: 120 P----------FKCEF------------------------------------EGCDRRFA 133
Query: 544 CKSDMRKHAKTH 555
SD +KH H
Sbjct: 134 NSSDRKKHMHVH 145
Score = 61.1 bits (149), Expect = 4e-11
Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 9/110 (8%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYK------- 145
G S + +I Q C +F L +H H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHK 193
EC GK F Y L H++ H+ +P+ C CG F + ++ HK
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112
Score = 60.8 bits (148), Expect = 4e-11
Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 568 CGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFV------ 621
G K + K + ++C ++F ++ EL H +
Sbjct: 3 SGSSGQPIKQELSC-KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 622 ---CELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
C G SFK + L +H + + E + CGK F ++ +L H + H+ +P+
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121
Query: 679 KCDI--CGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
KC+ C F + D +H VH++ + +
Sbjct: 122 KCEFEGCDRRFANSSDRKKH-MHVHTSDKSGPSS 154
Score = 57.3 bits (139), Expect = 7e-10
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 561 RSYTCDQCGKQLSYAKTLANHI--------KGVHLKIKKHSCENCAKSFFSLAELRQHSP 612
S C + S L H+ + + C KSF + +L H
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 613 VHSEQKSFVC--ELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMK 670
VH+ +K F C CG F + L HK+ + E +K E C ++F + +HM
Sbjct: 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143
Query: 671 RHSDVRPYKCD 681
H+ +
Sbjct: 144 VHTSDKSGPSS 154
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 76.8 bits (190), Expect = 4e-17
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 369 ERGFVCD--LCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSD 426
+R F+C C + + L H + H + Y+ C+R+F R+ +L H R H+
Sbjct: 4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 427 VRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTL--CSASFKRSSHLKQHGKTH 481
V+P++C C++ F + ++ H R H+ +P+ C C F RS L +H H
Sbjct: 64 VKPFQCKTCQRKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 64.1 bits (157), Expect = 1e-12
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 312 ERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHSCDV--CDKSFVNRAGLRLHKLIHS 367
+R + C + C K+ S+L +H + H K + CD C++ F L+ H+ H+
Sbjct: 4 KRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT 62
Query: 368 EERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTH 424
+ F C C F + L H + H + + + C +KF R+ +L H H
Sbjct: 63 GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 60.6 bits (148), Expect = 2e-11
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 618 KSFVCE--LCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDV 675
+ F+C C + + + L H + + E Y+ + C ++F ++ L H +RH+ V
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 676 RPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTI--CSATFKTARALKQHGRTH 729
+P++C C F + + H H+ +P+ C C F + L +H H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTH-TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 58.7 bits (143), Expect = 1e-10
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 62 DQCGKHFTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVCD 119
C K + L H + H K + CD C + F + +LK+H H+ K F C
Sbjct: 12 PGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK 70
Query: 120 LCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRH 168
C F + L +H + + E + C KKF ++ L H H
Sbjct: 71 TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 53.7 bits (130), Expect = 6e-09
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 563 YTCDQ--CGKQLSYAKTLANHIKGVHLKIKKHSCEN--CAKSFFSLAELRQHSPVHSEQK 618
+ C C K+ L H + H K + C+ C + F +L++H H+ K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 619 SFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRH 672
F C+ C F + L +H + + E + C KKF ++ L H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 53.3 bits (129), Expect = 7e-09
Identities = 35/189 (18%), Positives = 59/189 (31%), Gaps = 85/189 (44%)
Query: 402 FKC--ILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
F C C++++ + S L H R H+ +PY+CD +
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKD----------------------- 43
Query: 460 QCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKC 517
C F RS LK+H + H KP
Sbjct: 44 ----CERRFSRSDQLKRHQRRHTGVKP--------------------------------- 66
Query: 518 QLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTC--DQCGKQLSY 574
+ C+ C+ +FS ++ H +TH G + ++C C K+ +
Sbjct: 67 ---------------FQCKTCQRKFSRSDHLKTHTRTH---TGEKPFSCRWPSCQKKFAR 108
Query: 575 AKTLANHIK 583
+ L H
Sbjct: 109 SDELVRHHN 117
Score = 51.0 bits (123), Expect = 4e-08
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Query: 533 YSCEQ--CKVQFSCKSDMRKHAKTHLPAIG-RSYTCD--QCGKQLSYAKTLANHIKGVHL 587
+ C C ++ S ++ H++ H G + Y CD C ++ S + L H + H
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKH---TGEKPYQCDFKDCERRFSRSDQLKRHQR-RHT 62
Query: 588 KIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCEL--CGASFKQRTCLWSHKK 640
+K C+ C + F L+ H+ H+ +K F C C F + L H
Sbjct: 63 GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117
Score = 50.6 bits (122), Expect = 7e-08
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 114 KGFVCD--LCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDV 171
+ F+C C + + S L H + + E Y+ + C ++F ++ L H +RH+ V
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 172 RPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNL--CSATFKTARGLKQHEKK 223
+P++C C F + + H + H +C C F + L +H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTR------THTGEKPFSCRWPSCQKKFARSDELVRHHNM 118
Query: 224 H 224
H
Sbjct: 119 H 119
Score = 46.7 bits (112), Expect = 1e-06
Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 61/167 (36%)
Query: 457 RPYQCT--LCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNM 512
RP+ C C+ + + SHL+ H + H KP
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP---------------------------- 36
Query: 513 MLMKCQLLHSHLNTQDNKINYSCE--QCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCG 569
Y C+ C+ +FS +++H + H G + + C C
Sbjct: 37 --------------------YQCDFKDCERRFSRSDQLKRHQRRH---TGVKPFQCKTCQ 73
Query: 570 KQLSYAKTLANHIKGVHLKIKKHSCEN--CAKSFFSLAELRQHSPVH 614
++ S + L H + H K SC C K F EL +H +H
Sbjct: 74 RKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 43.7 bits (104), Expect = 2e-05
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDV--C 349
C+ F+ +LK H + H+ + + C C ++ + +L H + H K SC C
Sbjct: 44 CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTR-THTGEKPFSCRWPSC 102
Query: 350 DKSFVNRAGLRLHKLIH 366
K F L H +H
Sbjct: 103 QKKFARSDELVRHHNMH 119
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 74.6 bits (184), Expect = 2e-16
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 379 ASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDI--CE 436
S +++H C + + ++S L +H+RTH+ +PYKC C+
Sbjct: 1 GSSGSSGPDLEKRRIHYCDYPG------CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCD 54
Query: 437 QHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
F + ++ H R H+ +P+QC +C+ SF RS HL H K H
Sbjct: 55 WRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 54.9 bits (133), Expect = 1e-09
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 627 ASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDI--CG 684
S ++ I+ + C K + K+ L H++ H+ +PYKC C
Sbjct: 1 GSSGSSGPDLEKRR------IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCD 54
Query: 685 HGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
F + ++ RH + H+ +P+ C +C+ +F + L H + H
Sbjct: 55 WRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 49.5 bits (119), Expect = 1e-07
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 13/107 (12%)
Query: 68 FTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVCDL--CGA 123
SS + H+CD C K + +S LK H H+ +K + C C
Sbjct: 3 SGSSGPDLEKRRI-------HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55
Query: 124 SFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSD 170
F + L H + + F+C +C + F ++ L HMKRH +
Sbjct: 56 RFARSDELTRHYRKHTGA--KPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 45.3 bits (108), Expect = 3e-06
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Query: 588 KIKKHSCE--NCAKSFFSLAELRQHSPVHSEQKSFVC--ELCGASFKQRTCLWSHKKWNH 643
K + H C+ C K + + L+ H H+ +K + C E C F + L H + +
Sbjct: 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71
Query: 644 EELIYKFECTLCGKKFVKNYSLYEHMKRHSD 674
F+C +C + F ++ L HMKRH +
Sbjct: 72 GA--KPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 44.9 bits (107), Expect = 4e-06
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 609 QHSPVHSEQKSFVCEL--CGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLY 666
P +++ C+ C + + + L +H + + E YK C +F ++ L
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64
Query: 667 EHMKRHSDVRPYKCDICGHGF 687
H ++H+ +P++C +C F
Sbjct: 65 RHYRKHTGAKPFQCGVCNRSF 85
Score = 44.9 bits (107), Expect = 4e-06
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 64 CGKHFTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVCDLC 121
C K +T S L H++ H K + C C F + EL +H H+ K F C +C
Sbjct: 23 CTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81
Query: 122 GASFKQRSCLWSHKK 136
SF + L H K
Sbjct: 82 NRSFSRSDHLALHMK 96
Score = 43.8 bits (104), Expect = 1e-05
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Query: 303 KSHLKTHSIERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHSC--DVCDKSFVNRAG 358
R + C + C K +S+L H+++ H K + C + CD F
Sbjct: 6 SGPDLEK--RRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDE 62
Query: 359 LRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
L H H+ + F C +C SF + L H K H
Sbjct: 63 LTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 39.9 bits (94), Expect = 2e-04
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 13/103 (12%)
Query: 542 FSCKSDMRKHAKTHLPAIGRSYTCD--QCGKQLSYAKTLANHIKGVHLKIKKHSC--ENC 597
+ + H CD C K + + L H++ H K + C E C
Sbjct: 3 SGSSGPDLEKRRIH--------YCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGC 53
Query: 598 AKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
F EL +H H+ K F C +C SF + L H K
Sbjct: 54 DWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Score = 34.9 bits (81), Expect = 0.015
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 290 PVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIK 335
C F +L H + H+ + + C C + + +L+LH+K
Sbjct: 51 EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Score = 34.5 bits (80), Expect = 0.019
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 534 SCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTC--DQCGKQLSYAKTLANHIKGVHLKIK 590
C ++ S ++ H +TH G + Y C + C + + + L H + H K
Sbjct: 19 DYPGCTKVYTKSSHLKAHLRTH---TGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAK 74
Query: 591 KHSCENCAKSFFSLAELRQHSPVH 614
C C +SF L H H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRH 98
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 75.2 bits (186), Expect = 2e-16
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 368 EERGFVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHS 425
E R C C F+ A+ H H ++ C C + F +SKL H H+
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRV---HVCAECGKAFVESSKLKRHQLVHT 58
Query: 426 DVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPYQCTL--CSASFKRSSHLKQHGKTH 481
+P++C C + F +++++ H R +H+ RPY C C+ F +S++LK H TH
Sbjct: 59 GEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 69.9 bits (172), Expect = 1e-14
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 312 ERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEE 369
R+ C H C K S + H+ H + H C C K+FV + L+ H+L+H+ E
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLH-THGP-RVHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 370 RGFVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKCIL--CDRKFHRNSKLNSHMRTHS 425
+ F C CG F L H ++H + + C C++KF +++ L SH+ TH+
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG--DRPYVCPFDGCNKKFAQSTNLKSHILTHA 118
Query: 426 DVRPYK 431
+ +
Sbjct: 119 KAKNNQ 124
Score = 65.6 bits (161), Expect = 4e-13
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKG 115
C C K F + ++ +H+ H + H C CGK+F +S+LK+H +H+ +K
Sbjct: 7 ACP--HKGCTKMFRDNSAMRKHLH-THGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 116 FVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRP 173
F C CG F L +H + + + Y C KKF ++ +L H+ H+ +
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 174 YK 175
+
Sbjct: 123 NQ 124
Score = 59.5 bits (145), Expect = 6e-11
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 616 EQKSFVCEL--CGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
E ++ C C F+ + + H H ++ C CGK FV++ L H H+
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHLH-THGPRVHV--CAECGKAFVESSKLKRHQLVHT 58
Query: 674 DVRPYKCDI--CGHGFKLNYDMLRHKQDVHSTTRPYLCTI--CSATFKTARALKQHGRTH 729
+P++C CG F L++++ H +H+ RPY+C C+ F + LK H TH
Sbjct: 59 GEKPFQCTFEGCGKRFSLDFNLRTH-VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 57.5 bits (140), Expect = 3e-10
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 563 YTCDQ--CGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSF 620
C C K + H+ H + H C C K+F ++L++H VH+ +K F
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLH-THGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 621 VCEL--CGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
C CG F L +H + + + Y C KKF ++ +L H+ H+ +
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Query: 679 K 679
+
Sbjct: 124 Q 124
Score = 56.0 bits (136), Expect = 9e-10
Identities = 38/111 (34%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 534 SCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHS 593
+ C F S MRKH TH P R + C +CGK + L H VH K
Sbjct: 9 PHKGCTKMFRDNSAMRKHLHTHGP---RVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQ 64
Query: 594 C--ENCAKSFFSLAELRQHSPVHSEQKSFVCEL--CGASFKQRTCLWSHKK 640
C E C K F LR H +H+ + +VC C F Q T L SH
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Score = 49.1 bits (118), Expect = 2e-07
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 21/125 (16%)
Query: 112 EQKGFVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHS 169
E + C C F+ S + H H + C CGK FV++ L H H+
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHLH-THGPRVHV--CAECGKAFVESSKLKRHQLVHT 58
Query: 170 DVRPYKCDI--CGHGFKLNYDMLRHKQDVHSNIIH--------NCNLCSATFKTARGLKQ 219
+P++C CG F L++++ H + IH + C+ F + LK
Sbjct: 59 GEKPFQCTFEGCGKRFSLDFNLRTHVR------IHTGDRPYVCPFDGCNKKFAQSTNLKS 112
Query: 220 HEKKH 224
H H
Sbjct: 113 HILTH 117
Score = 45.2 bits (108), Expect = 5e-06
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHS 345
C C F + KLK H H+ E+ + C CGK+ NL H++ +H + +
Sbjct: 36 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYV 94
Query: 346 CDV--CDKSFVNRAGLRLHKLIHSEER 370
C C+K F L+ H L H++ +
Sbjct: 95 CPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 44.8 bits (107), Expect = 9e-06
Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 60/172 (34%)
Query: 457 RPYQCTL--CSASFKRSSHLKQHGKTH-IKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMM 513
R C C+ F+ +S +++H TH +
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRV----------------------------- 34
Query: 514 LMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTC--DQCGK 570
+ C +C F S +++H H G + + C + CGK
Sbjct: 35 -------------------HVCAECGKAFVESSKLKRHQLVH---TGEKPFQCTFEGCGK 72
Query: 571 QLSYAKTLANHIKGVHLKIKKHSC--ENCAKSFFSLAELRQHSPVHSEQKSF 620
+ S L H++ +H + + C + C K F L+ H H++ K+
Sbjct: 73 RFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 73.7 bits (182), Expect = 2e-16
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 402 FKCIL--CDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
+ C + CDR+F ++ L H+R H+ +P++C IC ++F + + H R H+ +P+
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPF 63
Query: 460 QCTLCSASFKRSSHLKQHGKTH 481
C +C F RS K+H K H
Sbjct: 64 ACDICGRKFARSDERKRHTKIH 85
Score = 55.6 bits (135), Expect = 6e-10
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 648 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
Y C ++F ++ SL H++ H+ +P++C IC F + + H H+ +P+
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-IRTHTGEKPF 63
Query: 708 LCTICSATFKTARALKQHGRTH 729
C IC F + K+H + H
Sbjct: 64 ACDICGRKFARSDERKRHTKIH 85
Score = 54.8 bits (133), Expect = 1e-09
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKG 115
C + + C + F+ S SL RHI+ +H K C IC ++F + L H H+ +K
Sbjct: 6 ACPV--ESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 116 FVCDLCGASFKQRSCLWSHKK 136
F CD+CG F + H K
Sbjct: 63 FACDICGRKFARSDERKRHTK 83
Score = 53.2 bits (129), Expect = 4e-09
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCG 152
C + F + L +H IH+ QK F C +C +F + L +H + + E + C +CG
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA--CDICG 69
Query: 153 KKFVKNYSLYEHMKRH 168
+KF ++ H K H
Sbjct: 70 RKFARSDERKRHTKIH 85
Score = 52.5 bits (127), Expect = 6e-09
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 311 IERSYTCH--HCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSE 368
+ER Y C C ++ + +L+ HI+ +H K C +C ++F L H H+
Sbjct: 1 MERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 369 ERGFVCDLCGASFKQRPALWAHKKLH 394
E+ F CD+CG F + H K+H
Sbjct: 60 EKPFACDICGRKFARSDERKRHTKIH 85
Score = 50.2 bits (121), Expect = 5e-08
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDK 351
C F+ L H++ H+ ++ + C C + + +L+ HI+ H K +CD+C +
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGR 70
Query: 352 SFVNRAGLRLHKLIHSEER 370
F + H IH ++
Sbjct: 71 KFARSDERKRHTKIHLRQK 89
Score = 49.0 bits (118), Expect = 1e-07
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 533 YSC--EQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKI 589
Y+C E C +FS + +H + H G + + C C + S + L HI+ H
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIH---TGQKPFQCRICMRNFSRSDHLTTHIR-THTGE 60
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQK 618
K +C+ C + F E ++H+ +H QK
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 47.5 bits (114), Expect = 4e-07
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 563 YTC--DQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSF 620
Y C + C ++ S + +L HI+ +H K C C ++F L H H+ +K F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 621 VCELCGASFKQRTCLWSHKK 640
C++CG F + H K
Sbjct: 64 ACDICGRKFARSDERKRHTK 83
Score = 45.1 bits (108), Expect = 3e-06
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 121 CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICG 180
C F Q L H + + + ++ C +C + F ++ L H++ H+ +P+ CDICG
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQ--CRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 181 HGFKLNYDMLRHK 193
F + + RH
Sbjct: 70 RKFARSDERKRHT 82
Score = 43.2 bits (103), Expect = 1e-05
Identities = 26/134 (19%), Positives = 38/134 (28%), Gaps = 60/134 (44%)
Query: 457 RPYQCTL--CSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNM 512
RPY C + C F +S L +H + H KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKP---------------------------- 34
Query: 513 MLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHL---PAIGRSYTCDQCG 569
+ C C FS + H +TH P + CD CG
Sbjct: 35 --------------------FQCRICMRNFSRSDHLTTHIRTHTGEKP-----FACDICG 69
Query: 570 KQLSYAKTLANHIK 583
++ + + H K
Sbjct: 70 RKFARSDERKRHTK 83
Score = 43.2 bits (103), Expect = 1e-05
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
C C ++F+ S L HI+ H K CDICG+ F + E K+H+ IH QK
Sbjct: 37 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 43.2 bits (103), Expect = 1e-05
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 618 KSFVCEL--CGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDV 675
+ + C + C F Q L H + + + ++ C +C + F ++ L H++ H+
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQ--CRICMRNFSRSDHLTTHIRTHTGE 60
Query: 676 RPYKCDICGHGFKLNYDMLRHK 697
+P+ CDICG F + + RH
Sbjct: 61 KPFACDICGRKFARSDERKRHT 82
Score = 42.5 bits (101), Expect = 3e-05
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH- 202
Y C ++F ++ SL H++ H+ +P++C IC F + + H + H
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR------THT 58
Query: 203 -----NCNLCSATFKTARGLKQHEKKH 224
C++C F + K+H K H
Sbjct: 59 GEKPFACDICGRKFARSDERKRHTKIH 85
Score = 38.6 bits (91), Expect = 5e-04
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIK 335
QC +C F+ L +H++TH+ E+ + C CG++ + H K
Sbjct: 36 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 72.2 bits (178), Expect = 9e-16
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 399 EYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNI 456
+ C + + ++S L +H+RTH+ +PY CD C F + ++ H R H+
Sbjct: 5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGH 63
Query: 457 RPYQCTLCSASFKRSSHLKQHGKTH 481
RP+QC C +F RS HL H K H
Sbjct: 64 RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 58.3 bits (142), Expect = 6e-11
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 338 HLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDL--CGASFKQRPALWAHKKLHD 395
C K++ + L+ H H+ E+ + CD CG F + L H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 396 AKLEYKFKCILCDRKFHRNSKLNSHMRTH 424
F+C CDR F R+ L HM+ H
Sbjct: 62 G--HRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 53.7 bits (130), Expect = 3e-09
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 647 IYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHKQDVHSTT 704
+ + CGK + K+ L H++ H+ +PY CD CG F + ++ RH + H+
Sbjct: 5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGH 63
Query: 705 RPYLCTICSATFKTARALKQHGRTH 729
RP+ C C F + L H + H
Sbjct: 64 RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 53.3 bits (129), Expect = 3e-09
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 82 HLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL--CGASFKQRSCLWSHKKWNH 139
CGK++ +S LK H H+ +K + CD CG F + L H + +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 140 EELSYKFECTLCGKKFVKNYSLYEHMKRH 168
F+C C + F ++ L HMKRH
Sbjct: 62 GH--RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 48.7 bits (117), Expect = 1e-07
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 586 HLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVC--ELCGASFKQRTCLWSHKKWNH 643
C K++ + L+ H H+ +K + C + CG F + L H + +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 644 EELIYKFECTLCGKKFVKNYSLYEHMKRH 672
F+C C + F ++ L HMKRH
Sbjct: 62 GH--RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 48.3 bits (116), Expect = 2e-07
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVC 118
CGK +T S L H++ H K + CD CG F + EL +H H+ + F C
Sbjct: 10 YAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 119 DLCGASFKQRSCLWSHKK 136
C +F + L H K
Sbjct: 69 QKCDRAFSRSDHLALHMK 86
Score = 45.2 bits (108), Expect = 3e-06
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHKQDVHSNII 201
+ + CGK + K+ L H++ H+ +PY CD CG F + ++ RH + H+
Sbjct: 6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHR 64
Query: 202 -HNCNLCSATFKTARGLKQHEKKHM 225
C C F + L H K+H
Sbjct: 65 PFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 41.4 bits (98), Expect = 6e-05
Identities = 24/113 (21%), Positives = 35/113 (30%), Gaps = 34/113 (30%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCH--QC-----QST 503
+ C ++ +SSHLK H +TH KP + C C +S
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP----------YHCDWDGCGWKFARSD 51
Query: 504 EEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHL 556
E L H + C++C FS + H K H
Sbjct: 52 E---------------LTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 40.6 bits (96), Expect = 1e-04
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSC--ENCAKSFFSLAELRQHSPVHSEQKSF 620
CGK + + L H++ H K + C + C F EL +H H+ + F
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 621 VCELCGASFKQRTCLWSHKK 640
C+ C +F + L H K
Sbjct: 67 QCQKCDRAFSRSDHLALHMK 86
Score = 33.3 bits (77), Expect = 0.035
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHL 339
C F +L H + H+ R + C C + + +L+LH+K H
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK-RHF 89
Score = 27.9 bits (63), Expect = 3.5
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 671 RHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTI--CSATFKTARALKQHGRT 728
+ + CG + + + H H+ +PY C C F + L +H R
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59
Query: 729 H 729
H
Sbjct: 60 H 60
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 73.3 bits (181), Expect = 9e-16
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYK-FEC 148
C C K F + LK H+ H+ +K F C CG + ++ L H+ N S + F C
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 149 TLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
++C + F + L HM H+ PYKC C F D+ H +HS
Sbjct: 70 SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 70.6 bits (174), Expect = 7e-15
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYK 401
C C K F+++ L++H H+ E+ F C CG + ++ L H+ + +
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 402 -FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHS 454
F C +C F R +L HM +H+ PYKC C Q F D+Q H +HS
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 69.1 bits (170), Expect = 2e-14
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH--IKSVHLKIKDHS 345
+CP C F K LK H + H+ E+ + C CGK NL H ++ + +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 346 CDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKK 392
C VC ++F R LRLH + H+ E + C C F Q+ L +H
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115
Score = 68.3 bits (168), Expect = 5e-14
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQH---SFIHSEQKGFV 117
C C K F S L H + H K C CGK +F L +H + ++ ++ F
Sbjct: 10 CPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 118 CDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKR 167
C +C +F++R L H + E+ Y +C+ C ++F++ L HM +
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPY--KCSSCSQQFMQKKDLQSHMIK 116
Score = 68.3 bits (168), Expect = 5e-14
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 309 HSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLH---KLI 365
S C C K+ L +H H K C C K + + L H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHM-RTH 424
+ E+ F C +C +F++R L H H E +KC C ++F + L SHM + H
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTG--EMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Query: 425 S 425
S
Sbjct: 119 S 119
Score = 65.6 bits (161), Expect = 4e-13
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKR--CVHSNIRPY 459
+C C +KF L H R H+ +P++C C + + ++ H+ C++ + + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 460 QCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQC 500
C++C +F+R L+ H +H P + C C
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMP----------YKCSSC 100
Score = 65.2 bits (160), Expect = 6e-13
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK 649
C C K F S L+ H+ H+ +K F C CG + ++ L H+ N +
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 650 -FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 702
F C++C + F + L HM H+ PYKC C F D+ H +HS
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 58.7 bits (143), Expect = 1e-10
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 614 HSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK-FECTLCGKKFVKNYSLYEHMKR- 671
S C C F + L H + + E K FEC CGK + + +L EH R
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEHEARN 58
Query: 672 --HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQH-GRT 728
+ + + C +C F+ ++ H H+ PY C+ CS F + L+ H +
Sbjct: 59 CMNRSEQVFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKL 117
Query: 729 H 729
H
Sbjct: 118 H 118
Score = 52.1 bits (126), Expect = 2e-08
Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 37/144 (25%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKC 510
S +C C F +LK H + H KP F C +C
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP----------FECPKCG--------- 42
Query: 511 NMMLMKCQLLHSHLNT--QDNKIN-----YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RS 562
KC +L N +N ++C C+ F + ++R H +H G
Sbjct: 43 -----KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH---TGEMP 94
Query: 563 YTCDQCGKQLSYAKTLANHIKGVH 586
Y C C +Q K L +H+ +H
Sbjct: 95 YKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 51.0 bits (123), Expect = 6e-08
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 17/123 (13%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKR-- 167
S G C C F + L H + + E + EC CGK + + +L EH R
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPF--ECPKCGKCYFRKENLLEHEARNC 59
Query: 168 -HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQH 220
+ + + C +C F+ ++ H H C+ CS F + L+ H
Sbjct: 60 MNRSEQVFTCSVCQETFRRRMELRLHMV------SHTGEMPYKCSSCSQQFMQKKDLQSH 113
Query: 221 EKK 223
K
Sbjct: 114 MIK 116
Score = 49.0 bits (118), Expect = 3e-07
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 29/129 (22%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH--- 202
EC C KKF+ Y L H ++H+ +P++C CG + ++L H+ N ++
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA---RNCMNRSE 64
Query: 203 ---NCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETF 259
C++C TF+ L+ H H T E KC+ CS+ F
Sbjct: 65 QVFTCSVCQETFRRRMELRLHMVSH-------------TGEMPYKCSS-------CSQQF 104
Query: 260 KSKPSLRAH 268
K L++H
Sbjct: 105 MQKKDLQSH 113
Score = 39.8 bits (94), Expect = 4e-04
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
C VC+ TF + +L+ H+ +H+ E Y C C +Q +L H+ +H
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 36.3 bits (85), Expect = 0.006
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSF-IHSEQK 114
C C + F L H+ H + C C + F +L+ H +HS
Sbjct: 69 CSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 72.6 bits (179), Expect = 3e-15
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 594 CENCAKSFFSLAELRQHSP---VHSEQKSFVCELCGA-----SFKQRTCLWSHKKWNHEE 645
+ C++ F S +L H +H E+K FVC G FK + L H + + E
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65
Query: 646 LIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKC--DICGHGFKLNYDMLRHKQDVHST 703
+K C K + + +L H++ H+ +PY C + C F D +H+ HS
Sbjct: 66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 704 TRPYLCTI--CSATFKTARALKQHGRTH 729
+PY+C + C+ + +L++H +T
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 67.6 bits (166), Expect = 2e-13
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKI--KHHWCDICG-----KSFFAASELKQHSFIHSEQ 113
D C + F S + L HI H+ K C G + F A L H H+ +
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65
Query: 114 KGFVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKR-HSD 170
K C C S+ + L +H + + E Y E C K F +H R HS+
Sbjct: 66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 171 VRPYKCDICG 180
+PY C + G
Sbjct: 126 EKPYVCKLPG 135
Score = 64.5 bits (158), Expect = 2e-12
Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 34/148 (22%)
Query: 342 KDHSCDVCDKSFVNRAGLRLH---KLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKL 398
D D C + F ++ L H + IH E + FVC G
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG-------------------- 41
Query: 399 EYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNI 456
C R F L HMR H+ +P+KC C + + +++ H R H+
Sbjct: 42 -----CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGE 95
Query: 457 RPYQCT--LCSASFKRSSHLKQH-GKTH 481
+PY C CS +F +S +H +TH
Sbjct: 96 KPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Score = 63.4 bits (155), Expect = 4e-12
Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCG-----KQLSYAKTLANHIKGVH 586
+ C +F + + H + + + C G + L H++ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RH 62
Query: 587 LKIKKHSC--ENCAKSFFSLAELRQHSPVHSEQKSFVCE--LCGASFKQRTCLWSHKKWN 642
K H C E C KS+ L L+ H H+ +K ++CE C +F + H+
Sbjct: 63 TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122
Query: 643 H-EELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
H E Y + C K++ SL +H+K
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 62.2 bits (152), Expect = 1e-11
Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 14/151 (9%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSI---ERSYTCHHCGKQLCG-----ASNLSLHIKSVHL 339
+ C F + +L H+ + I + + CH G L +H++ H
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHT 63
Query: 340 KIKDHSCDV--CDKSFVNRAGLRLHKLIHSEERGFVC--DLCGASFKQRPALWAHKK-LH 394
K H C C KS+ L+ H H+ E+ ++C + C +F H+ H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 395 DAKLEYKFKCILCDRKFHRNSKLNSHMRTHS 425
+ Y K C +++ S L H++T
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 55.3 bits (134), Expect = 3e-09
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVC 118
C + + F + L H++ H K H C C KS+ LK H H+ +K ++C
Sbjct: 42 CSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100
Query: 119 --DLCGASFKQRSCLWSHKKWNH-EELSYKFECTLCGKKFVKNYSLYEHMKRHS 169
+ C +F S H+ H E Y + C K++ SL +H+K
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 54.5 bits (132), Expect = 6e-09
Identities = 34/194 (17%), Positives = 55/194 (28%), Gaps = 83/194 (42%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDV 348
C F + L H++ H+ E+ + C G
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG--------------------------- 74
Query: 349 CDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCD 408
C KS+ L+ H H+ E+ ++C+ G C
Sbjct: 75 CRKSYSRLENLKTHLRSHTGEKPYMCEHEG----------------------------CS 106
Query: 409 RKFHRNSKLNSHM-RTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSAS 467
+ F S H RTHS+ +PY C + C+
Sbjct: 107 KAFSNASDRAKHQNRTHSNEKPYVCKLPG---------------------------CTKR 139
Query: 468 FKRSSHLKQHGKTH 481
+ S L++H KT
Sbjct: 140 YTDPSSLRKHVKTV 153
Score = 47.6 bits (114), Expect = 1e-06
Identities = 41/208 (19%), Positives = 64/208 (30%), Gaps = 67/208 (32%)
Query: 172 RPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLT 231
+ D C F ++ H H IH K+
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEH---IH----------------GERKEF------V 36
Query: 232 CDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHI--------WKCQMEPQTILETY 283
C CS FK++ L H+ KC E
Sbjct: 37 CHWG---------------GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG------- 74
Query: 284 NILSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHH--CGKQLCGASNLSLHIKSVHLKI 341
C+ +++ LK+HL++H+ E+ Y C H C K AS+ + H H
Sbjct: 75 --------CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 126
Query: 342 KDHSCDV--CDKSFVNRAGLRLHKLIHS 367
K + C + C K + + + LR H
Sbjct: 127 KPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 36.8 bits (86), Expect = 0.007
Identities = 38/207 (18%), Positives = 61/207 (29%), Gaps = 70/207 (33%)
Query: 146 FECTLCGKKFVKNYSLYEHMKR---HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH 202
C ++F L H+ H + + + C G
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41
Query: 203 NCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSK 262
C+ FK L H ++H T E KC C +++
Sbjct: 42 -CSRELRPFKAQYMLVVHMRRH-------------TGEKPHKCTF-----EGCRKSYSRL 82
Query: 263 PSLRAHIW--------KCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLK-THSIER 313
+L+ H+ C+ C F++ H THS E+
Sbjct: 83 ENLKTHLRSHTGEKPYMCEH---------------EGCSKAFSNASDRAKHQNRTHSNEK 127
Query: 314 SYTCHH--CGKQLCGASNLSLHIKSVH 338
Y C C K+ S+L H+K+VH
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 34.9 bits (81), Expect = 0.037
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 7/61 (11%)
Query: 676 RPYKCDICGHGFKLNYDMLRH--KQDVHSTTRPYLCTICSAT-----FKTARALKQHGRT 728
+ D C F ++ H + +H + ++C + FK L H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 729 H 729
H
Sbjct: 62 H 62
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 69.8 bits (172), Expect = 6e-15
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
KC +C + F R KL +HMR H+ V+PYKC C+ + + H R +HS+ RP++C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKC 67
Query: 462 TLCSASFKRSSHLKQHGKTH 481
+C + + SS L H ++H
Sbjct: 68 QICPYASRNSSQLTVHLRSH 87
Score = 65.1 bits (160), Expect = 3e-13
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHS 425
C++CG F ++ L H + H +KC CD +S LN H+R HS
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 426 DVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
D RP+KC IC + + + +H R H+
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLR-SHTGDSGPSS 95
Score = 62.1 bits (152), Expect = 4e-12
Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 31/125 (24%)
Query: 308 THSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHS 367
+ + C CGK L H H +K + C CD + + + L H IHS
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 368 EERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDV 427
+ER F C +C + + S+L H+R+H+
Sbjct: 61 DERPFKCQICPYASRNS------------------------------SQLTVHLRSHTGD 90
Query: 428 RPYKC 432
Sbjct: 91 SGPSS 95
Score = 61.3 bits (150), Expect = 6e-12
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECT 149
C++CGK F +LK H H+ K + C C + S L H + + +E +K C
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK--CQ 68
Query: 150 LCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+C + L H++ H+
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 57.8 bits (141), Expect = 1e-10
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+C +CGK F + L HM+ H+ V+PYKC C + + + +H +HS RP+ C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDERPFKC 67
Query: 710 TICSATFKTARALKQHGRTH 729
IC + + L H R+H
Sbjct: 68 QICPYASRNSSQLTVHLRSH 87
Score = 57.4 bits (140), Expect = 1e-10
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C+ CGK F+ L H++ H +K + C C + +S L +H IHS+++ F C +
Sbjct: 11 CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 121 CGASFKQRSCLWSHKK 136
C + + S L H +
Sbjct: 70 CPYASRNSSQLTVHLR 85
Score = 57.0 bits (139), Expect = 2e-10
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 614 HSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
CE+CG F ++ L +H + + YK C C + SL +H++ HS
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYK--CKTCDYAAADSSSLNKHLRIHS 60
Query: 674 DVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
D RP+KC IC + + + + H H+
Sbjct: 61 DERPFKCQICPYASRNSSQLTVH-LRSHTGDSGPSS 95
Score = 55.9 bits (136), Expect = 5e-10
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCD 347
+C VC F+ K KLK+H++ H+ + Y C C +S+L+ H++ +H + C
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQ 68
Query: 348 VCDKSFVNRAGLRLHKLIHSEERGFVC 374
+C + N + L +H H+ + G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 54.7 bits (133), Expect = 1e-09
Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Query: 584 GVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNH 643
G H CE C K F +L+ H H+ K + C+ C + + L H + +
Sbjct: 1 GSSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 644 EELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+E +K C +C + L H++ H+
Sbjct: 61 DERPFK--CQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 54.4 bits (132), Expect = 2e-09
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHS 169
C++CG F ++ L +H + + YK C C + SL +H++ HS
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYK--CKTCDYAAADSSSLNKHLRIHS 60
Query: 170 DVRPYKCDICGHGFKLNYDMLRHK 193
D RP+KC IC + + + + H
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHL 84
Score = 49.3 bits (119), Expect = 9e-08
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVC 622
+ C+ CGK S L H++ H +K + C+ C + + L +H +HS+++ F C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 623 ELCGASFKQRTCLWSHKK 640
++C + + + L H +
Sbjct: 68 QICPYASRNSSQLTVHLR 85
Score = 48.6 bits (117), Expect = 2e-07
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 423 THSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ P+KC++C + F ++ H R H+ ++PY+C C + SS L +H + H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Score = 47.8 bits (115), Expect = 3e-07
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKK 591
+ CE C FS K ++ H + H G + Y C C + + +L H++ +H +
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCH---TGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERP 64
Query: 592 HSCENCAKSFFSLAELRQHSPVHSEQKSFVC 622
C+ C + + ++L H H+
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 40.9 bits (97), Expect = 9e-05
Identities = 23/132 (17%), Positives = 34/132 (25%), Gaps = 54/132 (40%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKC 510
+ P++C +C F R LK H + H KP
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-------------------------- 36
Query: 511 NMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCG 569
Y C+ C + S + KH + H R + C C
Sbjct: 37 ----------------------YKCKTCDYAAADSSSLNKHLRIH---SDERPFKCQICP 71
Query: 570 KQLSYAKTLANH 581
+ L H
Sbjct: 72 YASRNSSQLTVH 83
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 68.7 bits (169), Expect = 1e-14
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
F+C +C R F R+ L +H+RTH+ +P+ CDIC + F + + + H+ + +I P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQ-HILPILE 61
Query: 462 TLCSASFKRSSHLKQH 477
++ HL+
Sbjct: 62 DKVEELLSKNYHLENE 77
Score = 56.4 bits (137), Expect = 3e-10
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C C ++F+ S L HI+ H K CDICG+ F + E K+H I + D
Sbjct: 6 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDK 63
Query: 121 CGASFKQRSCLWSHKK 136
+ L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 56.0 bits (136), Expect = 4e-10
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECT 149
C IC ++F + L H H+ +K F CD+CG F + H+ L
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHILPIL--ED 62
Query: 150 LCGKKFVKNYSLYEHMKRH 168
+ KNY L + R
Sbjct: 63 KVEELLSKNYHLENEVARL 81
Score = 55.6 bits (135), Expect = 5e-10
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 341 IKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEY 400
+K C +C ++F L H H+ E+ F CD+CG F + H+ +
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL--- 57
Query: 401 KFKCILCDRKFHRNSKLNSH---MRTH 424
+ +N L + ++
Sbjct: 58 PILEDKVEELLSKNYHLENEVARLKKL 84
Score = 54.4 bits (132), Expect = 1e-09
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
F+C +C + F ++ L H++ H+ +P+ CDICG F + + RH +D+ P L
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQ-HILPILE 61
Query: 710 TICSATFKTARALK---QHGRTH 729
L+ +
Sbjct: 62 DKVEELLSKNYHLENEVARLKKL 84
Score = 54.0 bits (131), Expect = 2e-09
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 427 VRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH-IKPE 485
++P++C IC ++F + + H R H+ +P+ C +C F RS K+H I P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHILP- 58
Query: 486 HDLKTKMNLFTCHQC 500
+
Sbjct: 59 ---------ILEDKV 64
Score = 52.5 bits (127), Expect = 5e-09
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 53/130 (40%)
Query: 456 IRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNMM 513
++P+QC +C +F RS HL H +TH KP
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP----------------------------- 31
Query: 514 LMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLS 573
++C+ C +F+ + ++H D+ + LS
Sbjct: 32 -------------------FACDICGRKFARSDERKRHRDIQH---ILPILEDKVEELLS 69
Query: 574 YAKTLANHIK 583
L N +
Sbjct: 70 KNYHLENEVA 79
Score = 49.8 bits (120), Expect = 5e-08
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 589 IKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIY 648
+K C C ++F L H H+ +K F C++CG F + H+ L
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHILPI 59
Query: 649 KFECTLCGKKFVKNYSLYEHMKRH 672
+ KNY L + R
Sbjct: 60 L--EDKVEELLSKNYHLENEVARL 81
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVC 622
+ C C + S + L HI+ H K +C+ C + F E ++H + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILE 61
Query: 623 ELCGASFKQRTCLWSHKK 640
+ + L +
Sbjct: 62 DKVEELLSKNYHLENEVA 79
Score = 47.5 bits (114), Expect = 3e-07
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCD 347
QC +C F+ L +H++TH+ E+ + C CG++ + H + I D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQ-HILPILED 62
Query: 348 VCDKSFVNRAGLRLHKL---IHSEER 370
++ L ER
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVGER 88
Score = 46.3 bits (111), Expect = 1e-06
Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 114 KGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRP 173
K F C +C +F + L +H + + E + C +CG+KF ++ H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA--CDICGRKFARSDERKRHRDIQHI-LP 58
Query: 174 YKCDICGHGFKLNYDMLRHKQ 194
D NY +
Sbjct: 59 ILEDKVEELLSKNYHLENEVA 79
Score = 46.0 bits (110), Expect = 1e-06
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCN 205
F+C +C + F ++ L H++ H+ +P+ CDICG F + + RH +D+ + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPILED 62
Query: 206 LCSATFKTARGLKQHEKKHMT 226
L+ +
Sbjct: 63 KVEELLSKNYHLENEVARLKK 83
Score = 40.9 bits (97), Expect = 8e-05
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 675 VRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
++P++C IC F + + H H+ +P+ C IC F + K+H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54
Score = 29.0 bits (66), Expect = 1.2
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 13/71 (18%)
Query: 171 VRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQHEKKH 224
++P++C IC F + + H + H C++C F + K+H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIR------THTGEKPFACDICGRKFARSDERKRHRDIQ 54
Query: 225 MTSILLTCDQC 235
+ + D+
Sbjct: 55 -HILPILEDKV 64
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 68.2 bits (168), Expect = 3e-14
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 326 GASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRP 385
G+S S + K+ C C + F L +H+ H++ER + CD+C +F+++
Sbjct: 1 GSSGSSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59
Query: 386 ALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
L H+ +H E FKC C + F ++ L H H
Sbjct: 60 HLRDHRYIHSK--EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 66.7 bits (164), Expect = 1e-13
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 387 LWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQ 446
+ + +F C C R F ++ L H RTH+D RPY CDIC + F+ ++
Sbjct: 5 SSGGRLPSKT--KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 447 MHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
H+ +HS +P++C C F +S L H H
Sbjct: 63 DHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Score = 64.8 bits (159), Expect = 5e-13
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRL 361
++ + C CG+ + NL +H + H + ++CD+C K+F + LR
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
H+ IHS+E+ F C CG F Q L HK LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Score = 60.9 bits (149), Expect = 1e-11
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C CG+HFT S +L H + H + + CDIC K+F L+ H +IHS++K F C
Sbjct: 20 CKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE 78
Query: 121 CGASFKQRSCLWSHKK 136
CG F Q L HK
Sbjct: 79 CGKGFCQSRTLAVHKT 94
Score = 59.8 bits (146), Expect = 3e-11
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 101 SELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYS 160
S +K F+C CG F + L H++ + +E Y C +C K F +
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT--CDICHKAFRRQDH 60
Query: 161 LYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
L +H HS +P+KC CG GF + + HK
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93
Score = 59.0 bits (144), Expect = 6e-11
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
F C CG+ F K+Y+L H + H+D RPY CDIC F+ + H + +HS +P+ C
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKC 76
Query: 710 TICSATFKTARALKQHGRTH 729
C F +R L H H
Sbjct: 77 QECGKGFCQSRTLAVHKTLH 96
Score = 57.4 bits (140), Expect = 2e-10
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 415 SKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHL 474
S + + + C C +HF +Y++ +H+R H++ RPY C +C +F+R HL
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHL 61
Query: 475 KQHGKTHI--KPEHDLKTKMNLFTCHQC 500
+ H H KP F C +C
Sbjct: 62 RDHRYIHSKEKP----------FKCQEC 79
Score = 52.8 bits (128), Expect = 7e-09
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK 649
K+ C+ C + F L H H++++ + C++C +F+++ L H+ + +E +K
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
C CGK F ++ +L H H
Sbjct: 76 --CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 51.7 bits (125), Expect = 2e-08
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 545 KSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFS 603
S + + C CG+ + + L H + H + ++C+ C K+F
Sbjct: 2 SSGSSGGRLPS---KTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRR 57
Query: 604 LAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
LR H +HS++K F C+ CG F Q L HK
Sbjct: 58 QDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94
Score = 47.8 bits (115), Expect = 4e-07
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKK 591
+ C+ C F+ ++ H +TH R YTCD C K L +H + +H K K
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTH---TDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKP 73
Query: 592 HSCENCAKSFFSLAELRQHSPVHSEQKSFVC 622
C+ C K F L H +H + S
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 47.8 bits (115), Expect = 5e-07
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHN-- 203
F C CG+ F K+Y+L H + H+D RPY CDIC F+ + H+ IH+
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR------YIHSKE 71
Query: 204 ----CNLCSATFKTARGLKQHEKKHM 225
C C F +R L H+ HM
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHKTLHM 97
Score = 43.6 bits (104), Expect = 1e-05
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALK 723
+ + C CG F +Y++L H + H+ RPY C IC F+ L+
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 724 QHGRTH 729
H H
Sbjct: 63 DHRYIH 68
Score = 43.2 bits (103), Expect = 2e-05
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
CD C K F L H + +H K K C CGK F + L H +H +
Sbjct: 48 CDICHKAFRRQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 40.9 bits (97), Expect = 1e-04
Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 55/137 (40%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEE 505
+ + + C C F +S +L H +TH +P
Sbjct: 8 GRL-PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERP--------------------- 45
Query: 506 AGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYT 564
Y+C+ C F + +R H H + +
Sbjct: 46 ---------------------------YTCDICHKAFRRQDHLRDHRYIH---SKEKPFK 75
Query: 565 CDQCGKQLSYAKTLANH 581
C +CGK ++TLA H
Sbjct: 76 CQECGKGFCQSRTLAVH 92
Score = 35.5 bits (83), Expect = 0.009
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
C +C F + L+ H HS E+ + C CGK C + L++H
Sbjct: 47 TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 67.5 bits (166), Expect = 6e-14
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 365 IHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTH 424
S ++ + C CG SF + H +H + C +C +KF L HM+ H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 425 SDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHL 474
+ ++PY+C+IC + +F + H+ V S + Y+ + +S
Sbjct: 61 TGIKPYECNICAK--RFMWRDSFHRH-VTSCTKSYEAAKAEQNTTEASGP 107
Score = 63.2 bits (155), Expect = 2e-12
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCG 152
CGKSF S+ +H +H + + C +CG FK + L H K + Y EC +C
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY--ECNICA 72
Query: 153 KKFVKNYSLYEHMKRHSDVRPYKCDICGHGF 183
K+F+ S + H+ S + Y+
Sbjct: 73 KRFMWRDSFHRHV--TSCTKSYEAAKAEQNT 101
Score = 61.7 bits (151), Expect = 7e-12
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 349 CDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCD 408
C KSF +++ H +H R + C +CG FK + L H K+H ++C +C
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG--IKPYECNICA 72
Query: 409 RKFHRNSKLNSHMRTHSDVRPYKCDICEQHF 439
++F H S + Y+ EQ+
Sbjct: 73 KRFMWRDSF--HRHVTSCTKSYEAAKAEQNT 101
Score = 61.3 bits (150), Expect = 9e-12
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 407 CDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSA 466
C + F S+ + HM H +RPY C +C + FK + + H + +H+ I+PY+C +C+
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAK 73
Query: 467 SFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQC 500
F +H + K + +
Sbjct: 74 RFMWRDSFHRHVTSCTKS----------YEAAKA 97
Score = 59.4 bits (145), Expect = 4e-11
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Query: 613 VHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRH 672
S K + C+ CG SF ++ H + Y C +CGKKF + L HMK H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY--GCGVCGKKFKMKHHLVGHMKIH 60
Query: 673 SDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATF 716
+ ++PY+C+IC F RH V S T+ Y
Sbjct: 61 TGIKPYECNICAKRFMWRDSFHRH---VTSCTKSYEAAKAEQNT 101
Score = 58.6 bits (143), Expect = 8e-11
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 63 QCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCG 122
QCGK FT RH+ +HL ++ + C +CGK F L H IH+ K + C++C
Sbjct: 14 QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA 72
Query: 123 ASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSL 161
F R H+ SY E + +
Sbjct: 73 KRFMWRDSF--HRHVTSCTKSY--EAAKAEQNTTEASGP 107
Score = 57.5 bits (140), Expect = 2e-10
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIH 366
S ++ Y C CGK S H S+HL ++ + C VC K F + L H IH
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 367 SEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNS 419
+ + + C++C F R + H+ + ++ ++ S +S
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSC--TKSYEAAKAEQNTTEASGPSS 109
Score = 57.1 bits (139), Expect = 3e-10
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDK 351
C +FT K + H+ H R Y C CGK+ +L H+K +H IK + C++C K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAK 73
Query: 352 SFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPAL 387
F+ R H+ + S + + + +
Sbjct: 74 RFMWRDS--FHRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 55.1 bits (134), Expect = 1e-09
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 594 CENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECT 653
C+ C KSF ++ +H +H + + C +CG FK + L H K + Y EC
Sbjct: 13 CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY--ECN 69
Query: 654 LCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGF 687
+C K+F+ S + H+ S + Y+
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNT 101
Score = 52.8 bits (128), Expect = 1e-08
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C CGK F L H+K +H IK + C+IC K F +H + S K +
Sbjct: 40 CGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAK 96
Query: 121 CGASFKQRSCL 131
+ + S
Sbjct: 97 AEQNTTEASGP 107
Score = 51.7 bits (125), Expect = 2e-08
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 109 IHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRH 168
S K + C CG SF +S H + Y C +CGKKF + L HMK H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY--GCGVCGKKFKMKHHLVGHMKIH 60
Query: 169 SDVRPYKCDICGHGF 183
+ ++PY+C+IC F
Sbjct: 61 TGIKPYECNICAKRF 75
Score = 50.9 bits (123), Expect = 4e-08
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKK 591
Y C+ C F+ KS +H HL G R Y C CGK+ L H+K +H IK
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHL---GLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKP 65
Query: 592 HSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCL 635
+ C CAK F +H V S KS+ + + +
Sbjct: 66 YECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGP 107
Score = 50.1 bits (121), Expect = 8e-08
Identities = 30/163 (18%), Positives = 45/163 (27%), Gaps = 58/163 (35%)
Query: 421 MRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKT 480
S + Y C C + F H +H +RPY C +C FK HL H K
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59
Query: 481 H--IKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQC 538
H IKP Y C C
Sbjct: 60 HTGIKP------------------------------------------------YECNIC 71
Query: 539 KVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLAN 580
+F + +H + +SY + + + A ++
Sbjct: 72 AKRFMWRDSFHRHVTS-----CTKSYEAAKAEQNTTEASGPSS 109
Score = 49.7 bits (120), Expect = 9e-08
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ C CGK F HM H +RPY C +CG FK+ + ++ H +H+ +PY C
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPYEC 68
Query: 710 TICSATFKTARALKQH 725
IC+ F + +H
Sbjct: 69 NICAKRFMWRDSFHRH 84
Score = 45.1 bits (108), Expect = 4e-06
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVC 622
Y C QCGK ++ H+ +HL ++ + C C K F L H +H+ K + C
Sbjct: 11 YPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68
Query: 623 ELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSL 665
+C F R H+ Y E + +
Sbjct: 69 NICAKRFMWRDSF--HRHVTSCTKSY--EAAKAEQNTTEASGP 107
Score = 42.8 bits (102), Expect = 3e-05
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCD 347
C VC F K L H+K H+ + Y C+ C K+ + H+ K +
Sbjct: 39 GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV---TSCTKSYEAA 95
Query: 348 VCDKSFVNRAGLR 360
+++ +G
Sbjct: 96 KAEQNTTEASGPS 108
Score = 37.4 bits (88), Expect = 0.002
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S + Y C CG F RH +H RPY C +C FK L H + H
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Score = 36.7 bits (86), Expect = 0.004
Identities = 25/153 (16%), Positives = 40/153 (26%), Gaps = 58/153 (37%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCK 509
S + Y C C SF S +H H+ +P
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP------------------------- 37
Query: 510 CNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQC 568
Y C C +F K + H K H G + Y C+ C
Sbjct: 38 -----------------------YGCGVCGKKFKMKHHLVGHMKIH---TGIKPYECNIC 71
Query: 569 GKQLSYAKTLANHIKGVHLKIKKHSCENCAKSF 601
K+ + + H+ K + ++
Sbjct: 72 AKRFMWRDSFHRHV---TSCTKSYEAAKAEQNT 101
Score = 27.8 bits (63), Expect = 4.9
Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 19/85 (22%)
Query: 251 QCSLCSETFKSKPSLRAHIWKCQMEPQTILET----YNILSQCPVCKLTFTDKRKLKSHL 306
C +C + FK K L H I T Y +C +C F + H
Sbjct: 39 GCGVCGKKFKMKHHLVGH--------MKI-HTGIKPY----ECNICAKRFMWRDSF--HR 83
Query: 307 KTHSIERSYTCHHCGKQLCGASNLS 331
S +SY + AS S
Sbjct: 84 HVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 27.0 bits (61), Expect = 8.1
Identities = 20/79 (25%), Positives = 23/79 (29%), Gaps = 29/79 (36%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCN 205
+ C CGK F HM H +RPY C +CG
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGK------------------------ 45
Query: 206 LCSATFKTARGLKQHEKKH 224
FK L H K H
Sbjct: 46 ----KFKMKHHLVGHMKIH 60
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 66.0 bits (162), Expect = 1e-13
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHS--NIRPY 459
C +C + F LN H +HS +PY C +C FK + H R H +PY
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPY 66
Query: 460 QCTLCSASFKRSSHLKQHGK 479
C C F R HL H K
Sbjct: 67 ICQSCGKGFSRPDHLNGHIK 86
Score = 62.1 bits (152), Expect = 3e-12
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECT 149
C+ICGK F L +H HS +K + C +CG FK++ + H + + + + C
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 150 LCGKKFVKNYSLYEHMKR 167
CGK F + L H+K+
Sbjct: 70 SCGKGFSRPDHLNGHIKQ 87
Score = 59.8 bits (146), Expect = 2e-11
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYK 401
+C++C K F + L HKL HS E+ + C +CG FK++ + H + HD +
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65
Query: 402 FKCILCDRKFHRNSKLNSHM-RTHS 425
+ C C + F R LN H+ + HS
Sbjct: 66 YICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 57.1 bits (139), Expect = 2e-10
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHS--EQKGFVC 118
C+ CGK F L RH H K + C +CG F + H H K ++C
Sbjct: 10 CEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 119 DLCGASFKQRSCLWSHKKWNH 139
CG F + L H K H
Sbjct: 69 QSCGKGFSRPDHLNGHIKQVH 89
Score = 57.1 bits (139), Expect = 2e-10
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHS 169
S G C++CG F+ L HK + E Y C +CG +F + + H++ H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYS--CPVCGLRFKRKDRMSYHVRSHD 59
Query: 170 --DVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
+PY C CG GF + H + VHS
Sbjct: 60 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 56.0 bits (136), Expect = 5e-10
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK 649
+CE C K F + L +H HS +K + C +CG FK++ + H + + +
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65
Query: 650 FECTLCGKKFVKNYSLYEHMKR 671
+ C CGK F + L H+K+
Sbjct: 66 YICQSCGKGFSRPDHLNGHIKQ 87
Score = 54.8 bits (133), Expect = 1e-09
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 614 HSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK-FECTLCGKKFVKNYSLYEHMKRH 672
S CE+CG F+ L HK + E K + C +CG +F + + H++ H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE---KPYSCPVCGLRFKRKDRMSYHVRSH 58
Query: 673 S--DVRPYKCDICGHGFKLNYDMLRHKQDVHS 702
+PY C CG GF + H + VHS
Sbjct: 59 DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 53.6 bits (130), Expect = 3e-09
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS--TTRPY 707
C +CGK F Y L H HS +PY C +CG FK M H H +PY
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSVGKPY 66
Query: 708 LCTICSATFKTARALKQHG-RTH 729
+C C F L H + H
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVH 89
Score = 52.5 bits (127), Expect = 8e-09
Identities = 32/136 (23%), Positives = 43/136 (31%), Gaps = 50/136 (36%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKC 510
S C +C F+ HL +H +H KP
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKP-------------------------- 35
Query: 511 NMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGK 570
YSC C ++F K M H ++H ++G+ Y C CGK
Sbjct: 36 ----------------------YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGK 73
Query: 571 QLSYAKTLANHIKGVH 586
S L HIK VH
Sbjct: 74 GFSRPDHLNGHIKQVH 89
Score = 46.3 bits (111), Expect = 1e-06
Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 14/86 (16%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH--- 202
C +CGK F Y L H HS +PY C +CG FK M H H
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV------RSHDGS 61
Query: 203 -----NCNLCSATFKTARGLKQHEKK 223
C C F L H K+
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQ 87
Score = 46.3 bits (111), Expect = 1e-06
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHL--KIKDHS 345
C +C F D L H +HS E+ Y+C CG + +S H H K +
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSVGKPYI 67
Query: 346 CDVCDKSFVNRAGLRLH-KLIHSEER 370
C C K F L H K +HS
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 44.0 bits (105), Expect = 7e-06
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHL---PAIGRSYTCDQCGKQLSYAKTLANHIKGVHL-- 587
+CE C F + +H +H P Y+C CG + ++ H++ H
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKP-----YSCPVCGLRFKRKDRMSYHVR-SHDGS 61
Query: 588 KIKKHSCENCAKSFFSLAELRQHS-PVHSEQKS 619
K + C++C K F L H VHS S
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 64.9 bits (159), Expect = 2e-13
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 416 KLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHS--NIRPYQCTLCSASFKRSSH 473
S RTHS +PY+C IC F + ++MH N+ + C C R S
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSD 60
Query: 474 LKQHGKTH 481
L H +
Sbjct: 61 LGVHLRKQ 68
Score = 56.8 bits (138), Expect = 2e-10
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 359 LRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLN 418
HS E+ + C +C A F Q + H + KF C CD R S L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 419 SHMRT-HSDVRPY 430
H+R HS P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 54.8 bits (133), Expect = 6e-10
Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHS--DVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
++C +C +F ++ + H+ +V + C C+ D+ +H R HS P
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 54.1 bits (131), Expect = 1e-09
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 103 LKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLY 162
HS +K + C +C A F Q + H H E KF C C + L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 163 EHMKR-HSDVRPY 174
H+++ HS P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 52.9 bits (128), Expect = 4e-09
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 301 KLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHL-KIKDHSCDVCDKSFVNRAGL 359
S +THS E+ Y C+ C + + + +HI H + C CD ++ L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 360 RLH-KLIHSEER 370
+H + HS
Sbjct: 62 GVHLRKQHSYSG 73
Score = 51.0 bits (123), Expect = 2e-08
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLY 666
HS +K + C +C A F Q + H H E + KF C C + L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 667 EHMKR-HSDVRPY 678
H+++ HS P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 50.6 bits (122), Expect = 2e-08
Identities = 11/54 (20%), Positives = 19/54 (35%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVH 586
Y C C +F+ M+ H + C C ++ L H++ H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 48.3 bits (116), Expect = 1e-07
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHS--DVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
+EC +C +F ++ ++ H+ + +V + C C D+ H + HS + P
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 45.6 bits (109), Expect = 1e-06
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERS--YTCHHCGKQLCGASNLSLHIKSVH 338
+C +C FT +K H+ E + C HC + S+L +H++ H
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 43.7 bits (104), Expect = 6e-06
Identities = 16/68 (23%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS--TTRPYLCTICSATFKTARA 721
S + HS +PY+C IC F + M H + C C
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSD 60
Query: 722 LKQHGRTH 729
L H R
Sbjct: 61 LGVHLRKQ 68
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHL--KIKHHWCDICGKSFFAASELKQHS-FIHSEQK 114
C C FT S ++ HI + C C S+L H HS
Sbjct: 18 CYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHL--KIKKHSCENCAKSFFSLAELRQH 610
Y C C + + + T+ HI + K C +C ++L H
Sbjct: 16 YECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVH 64
Score = 34.4 bits (80), Expect = 0.011
Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 160 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNII--HNCNLCSATFKTARGL 217
S + HS +PY+C IC F + M H H+ + +C C L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 218 KQHEKKHMT 226
H +K +
Sbjct: 62 GVHLRKQHS 70
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 64.4 bits (158), Expect = 3e-13
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
F C +C + F R+S L++H+ HSD RPY C C + F D++ H +H+ +P++C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKC 60
Query: 462 TLCSASFKRSSHLKQHGKTH 481
+C +F +SS+L H + H
Sbjct: 61 QVCGKAFSQSSNLITHSRKH 80
Score = 58.6 bits (143), Expect = 4e-11
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
F+C +CGK F ++ +L H+ HSD RPY C CG F DM +H +H+ +P+ C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKC 60
Query: 710 TICSATFKTARALKQHGRTH 729
+C F + L H R H
Sbjct: 61 QVCGKAFSQSSNLITHSRKH 80
Score = 56.7 bits (138), Expect = 2e-10
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C CGK F S +L+ H+ +H + + C CGK F S++K+H+FIH+ +K C +
Sbjct: 4 CKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 121 CGASFKQRSCLWSHKK 136
CG +F Q S L +H +
Sbjct: 63 CGKAFSQSSNLITHSR 78
Score = 55.9 bits (136), Expect = 4e-10
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 346 CDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCI 405
C +C KSF + L H LIHS+ R + C CG F Q+ + H +H E KC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQ 61
Query: 406 LCDRKFHRNSKLNSHMRTH 424
+C + F ++S L +H R H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 55.1 bits (134), Expect = 6e-10
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECT 149
C ICGKSF +S L H IHS+ + + C CG F Q+S + H + E + +C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--KCQ 61
Query: 150 LCGKKFVKNYSLYEHMKRH 168
+CGK F ++ +L H ++H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 54.0 bits (131), Expect = 2e-09
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 314 SYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFV 373
S+ C CGK +S LS H +H + + C C K F ++ ++ H IH+ E+
Sbjct: 1 SFDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 374 CDLCGASFKQRPALWAHKKLH 394
C +CG +F Q L H + H
Sbjct: 60 CQVCGKAFSQSSNLITHSRKH 80
Score = 49.7 bits (120), Expect = 4e-08
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 562 SYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFV 621
S+ C CGK + TL+ H +H + + C+ C K F +++++H+ +H+ +K
Sbjct: 1 SFDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 622 CELCGASFKQRTCLWSHKK 640
C++CG +F Q + L +H +
Sbjct: 60 CQVCGKAFSQSSNLITHSR 78
Score = 49.0 bits (118), Expect = 1e-07
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 116 FVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYK 175
F C +CG SFK+ S L +H + + Y C CGK+F + + +H H+ +P+K
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYP--CQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 176 CDICGHGFKLNYDMLRHK 193
C +CG F + +++ H
Sbjct: 60 CQVCGKAFSQSSNLITHS 77
Score = 48.6 bits (117), Expect = 1e-07
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH--- 202
F+C +CGK F ++ +L H+ HSD RPY C CG F DM +H IH
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT------FIHTGE 55
Query: 203 ---NCNLCSATFKTARGLKQHEKKH 224
C +C F + L H +KH
Sbjct: 56 KPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 48.6 bits (117), Expect = 2e-07
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCD 347
C +C +F L +HL HS R Y C +CGK+ S++ H +H K H C
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKCQ 61
Query: 348 VCDKSFVNRAGLRLHKLIH 366
VC K+F + L H H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 46.6 bits (112), Expect = 6e-07
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 594 CENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECT 653
C+ C KSF + L H +HS+ + + C+ CG F Q++ + H + E + +C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--KCQ 61
Query: 654 LCGKKFVKNYSLYEHMKRH 672
+CGK F ++ +L H ++H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 42.0 bits (100), Expect = 3e-05
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKK 591
+ C+ C F S + H H R Y C CGK+ + H +H K
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIH---SDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKP 57
Query: 592 HSCENCAKSFFSLAELRQHSPVH 614
H C+ C K+F + L HS H
Sbjct: 58 HKCQVCGKAFSQSSNLITHSRKH 80
Score = 39.7 bits (94), Expect = 2e-04
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIH 110
C CGK F + +H +H K H C +CGK+F +S L HS H
Sbjct: 32 CQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 37.8 bits (89), Expect = 8e-04
Identities = 27/128 (21%), Positives = 42/128 (32%), Gaps = 51/128 (39%)
Query: 430 YKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHD 487
+ C IC + FK + + H +HS+ RPY C C F + S +K+H H KP
Sbjct: 2 FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP--- 57
Query: 488 LKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSD 547
+ C+ C FS S+
Sbjct: 58 ---------------------------------------------HKCQVCGKAFSQSSN 72
Query: 548 MRKHAKTH 555
+ H++ H
Sbjct: 73 LITHSRKH 80
Score = 37.4 bits (88), Expect = 0.001
Identities = 31/126 (24%), Positives = 40/126 (31%), Gaps = 54/126 (42%)
Query: 459 YQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMK 516
+ C +C SFKRSS L H H +P
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRP-------------------------------- 29
Query: 517 CQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYA 575
Y C+ C +F KSDM+KH H G + + C CGK S +
Sbjct: 30 ----------------YPCQYCGKRFHQKSDMKKHTFIH---TGEKPHKCQVCGKAFSQS 70
Query: 576 KTLANH 581
L H
Sbjct: 71 SNLITH 76
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 61.4 bits (150), Expect = 2e-12
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 422 RTHSDVRPYKCDICEQHFKFNYDIQMHKR-CVHSNIRPYQCTLCSASFKRSSHLKQHGKT 480
T Y+C +C + + + H N++ Y C C F R ++ H K
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 481 H 481
Sbjct: 63 I 63
Score = 51.0 bits (123), Expect = 1e-08
Identities = 9/65 (13%), Positives = 22/65 (33%)
Query: 363 KLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMR 422
+ E + C +C + H + + C C ++F R + +H++
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 423 THSDV 427
+
Sbjct: 62 IIHKI 66
Score = 45.6 bits (109), Expect = 9e-07
Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 308 THSIERSYTCHHCGKQLCGASNLSLHIKSV-HLKIKDHSCDVCDKSFVNRAGLRLHKLIH 366
T E +Y C C + SN H + +K + C C K F + + H I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 44.9 bits (107), Expect = 2e-06
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 669 MKR-HSDVRPYKCDICGHGFKLNYDMLRHKQDVHST-TRPYLCTICSATFKTARALKQHG 726
M+ Y+C +C + + RH H + Y C C F + H
Sbjct: 1 MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 727 RTH 729
+
Sbjct: 61 KII 63
Score = 44.5 bits (106), Expect = 2e-06
Identities = 11/63 (17%), Positives = 24/63 (38%)
Query: 109 IHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRH 168
+ + C +C + S H +H+ + C C K+F + ++ H+K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 169 SDV 171
+
Sbjct: 64 HKI 66
Score = 42.9 bits (102), Expect = 9e-06
Identities = 10/62 (16%), Positives = 27/62 (43%)
Query: 614 HSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
+ ++ C++C + + H +H+ + + C C K+F + ++ H+K
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 674 DV 675
+
Sbjct: 65 KI 66
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 90 CDICGKSFFAASELKQH--SFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
C +C + + S +H + K + C C F ++ + +H K
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Score = 41.8 bits (99), Expect = 3e-05
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLI--HSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ C VC + + + + H + + + C C F ++ + AH K+
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 41.4 bits (98), Expect = 3e-05
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 61 CDQCGKHFTSSQSLARHIK-CVHLKIKHHWCDICGKSFFAASELKQHSFIH 110
C C + +T + RH +K + C C K F + H I
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 288 QCPVCKLTFTDKRKLKSHLKT--HSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
+C VC +T H T + Y C C K+ N++ H+K +H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 146 FECTLCGKKFVKNYSLYEHM--KRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ C +C + + + H +V+ Y C C F +M H + +H
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 650 FECTLCGKKFVKNYSLYEHM--KRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 701
+ C +C + + + H +V+ Y C C F +M H + +H
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVH 586
Y C+ C ++ S+ +H T + Y C C K+ + + H+K +H
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 37.5 bits (88), Expect = 6e-04
Identities = 9/53 (16%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 590 KKHSCENCAKSFFSLAELRQH--SPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ C+ C++ + ++ +H + K + C C F ++ + +H K
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Score = 37.1 bits (87), Expect = 9e-04
Identities = 16/107 (14%), Positives = 24/107 (22%), Gaps = 52/107 (48%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI----KPEHDLKTKMNLFTCHQCQSTEEAGC 508
Y+C +CS + S+ +H T K
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV------------------------ 40
Query: 509 KCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
Y C C +F+ K +M H K
Sbjct: 41 ------------------------YPCPFCFKEFTRKDNMTAHVKII 63
Score = 34.1 bits (79), Expect = 0.013
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Query: 165 MKR-HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNII--HNCNLCSATFKTARGLKQHE 221
M+ Y+C +C + + RH H + + C C F + H
Sbjct: 1 MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 222 KKH 224
K
Sbjct: 61 KII 63
Score = 33.7 bits (78), Expect = 0.016
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIK-GVHLKIKKHSCENCAKSFFSLAELRQHSPVH 614
+Y C C + ++ H +K + C C K F + H +
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 27.5 bits (62), Expect = 2.8
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 251 QCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTH 309
+C +CS + + H + ++ Y CP C FT K + +H+K
Sbjct: 12 RCKVCSRVYTHISNFCRHY---VTSHKRNVKVY----PCPFCFKEFTRKDNMTAHVKII 63
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 60.0 bits (146), Expect = 1e-11
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 410 KFHRNSKLNSHMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSAS 467
+ H + L +++ RPY C + C++ F + ++ H R +H+ +P+QC +C +
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRN 58
Query: 468 FKRSSHLKQHGKTH 481
F RS HL H +TH
Sbjct: 59 FSRSDHLTTHIRTH 72
Score = 39.2 bits (92), Expect = 2e-04
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 361 LHKLIHSEERGFVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLN 418
L + + R + C + C F + L H ++H + F+C +C R F R+ L
Sbjct: 9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG--QKPFQCRICMRNFSRSDHLT 66
Query: 419 SHMRTHS 425
+H+RTH+
Sbjct: 67 THIRTHT 73
Score = 36.5 bits (85), Expect = 0.002
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 666 YEHMKRHSDV--RPYKCDI--CGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARA 721
++ + RPY C + C F + ++ RH + +H+ +P+ C IC F +
Sbjct: 6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDH 64
Query: 722 LKQHGRTH 729
L H RTH
Sbjct: 65 LTTHIRTH 72
Score = 35.7 bits (83), Expect = 0.004
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 FECTL--CGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGF 183
+ C + C ++F ++ L H++ H+ +P++C IC F
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Score = 35.7 bits (83), Expect = 0.004
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 650 FECTL--CGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGF 687
+ C + C ++F ++ L H++ H+ +P++C IC F
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Score = 35.4 bits (82), Expect = 0.005
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 62 DQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHS 111
+ C + F+ S L RHI+ +H K C IC ++F + L H H+
Sbjct: 25 ESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 34.6 bits (80), Expect = 0.010
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
C + F + EL +H IH+ QK F C +C +F + L +H +
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70
Score = 34.2 bits (79), Expect = 0.011
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 540 VQFSCKSDMRKHAKTHLPAIGRSYTCD--QCGKQLSYAKTLANHIKGVHLKIKKHSCENC 597
++ +++ + R Y C C ++ S + L HI+ +H K C C
Sbjct: 1 MEPHPMNNLLNYVVPK----MRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRIC 55
Query: 598 AKSFFSLAELRQHSPVHS 615
++F L H H+
Sbjct: 56 MRNFSRSDHLTTHIRTHT 73
Score = 33.4 bits (77), Expect = 0.026
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 288 QCPV--CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIK 335
CPV C F+ +L H++ H+ ++ + C C + + +L+ HI+
Sbjct: 21 ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70
Score = 32.3 bits (74), Expect = 0.071
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 595 ENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
E+C + F EL +H +H+ QK F C +C +F + L +H +
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70
Score = 30.4 bits (69), Expect = 0.35
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 342 KDHSCDV--CDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ++C V CD+ F L H IH+ ++ F C +C +F + L H + H
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 29.6 bits (67), Expect = 0.61
Identities = 13/88 (14%), Positives = 26/88 (29%), Gaps = 18/88 (20%)
Query: 468 FKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQ 527
++L + ++P + C C+ + L H+
Sbjct: 3 PHPMNNLLNYVVPKMRP-------------YACPVES-----CDRRFSRSDELTRHIRIH 44
Query: 528 DNKINYSCEQCKVQFSCKSDMRKHAKTH 555
+ + C C FS + H +TH
Sbjct: 45 TGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 28.4 bits (64), Expect = 1.3
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 610 HSPVHSEQKSFVC--ELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYE 667
+ V + + + C E C F + L H + + + F+C +C + F ++ L
Sbjct: 10 LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ--KPFQCRICMRNFSRSDHLTT 67
Query: 668 HMKRHS 673
H++ H+
Sbjct: 68 HIRTHT 73
Score = 26.9 bits (60), Expect = 4.6
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 533 YSC--EQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIK 583
Y+C E C +FS ++ +H + H + + C C + S + L HI+
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQ--KPFQCRICMRNFSRSDHLTTHIR 70
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 59.1 bits (144), Expect = 3e-11
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 103 LKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYK--FECTLCGKKFVKNYS 160
H+ +K + C C +F+Q+ L H K H+ F C+ CGK F + +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 161 LYEHMKRHSDVRPYKCDICGHGF 183
+ H + + + G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 57.2 bits (139), Expect = 1e-10
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 359 LRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH-DAKLEYK-FKCILCDRKFHRNSK 416
H+ E+ + C C +F+Q+ L H K + D F C C + F R +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 417 LNSHMRTHSDVRPYKCDIC 435
+ H + + +
Sbjct: 63 MARHADNCAGPDGVEGENS 81
Score = 56.8 bits (138), Expect = 2e-10
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK--FECTLCGKKFVKNYS 664
H+ +K + C C +F+Q+ L H K H+ F C+ CGK F + +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 665 LYEHMKRHSDVRPYKCDICGHGF 687
+ H + + + G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 56.4 bits (137), Expect = 3e-10
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKS---VHLKIKDHSCDVCDKSFVNRAG 358
S +TH+ E+ Y C HC K L +H K + C C K+F R
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 359 LRLHKLIHSEERGFVCDLCGASF 381
+ H + G + G S
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 52.1 bits (126), Expect = 8e-09
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 17/90 (18%)
Query: 417 LNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVH----SNIRPYQCTLCSASFKRSS 472
S RTH+ +PY C C++ F+ + MH + + + C+ C +F R +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 473 HLKQHGKTHI--KPEHDLKTKMNLFTCHQC 500
+ +H
Sbjct: 62 TMARHADNCAGPDG----------VEGENS 81
Score = 50.2 bits (121), Expect = 4e-08
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 61 CDQCGKHFTSSQSLARHIKCVH----LKIKHHWCDICGKSFFAASELKQHSFIHSEQKGF 116
C C K F Q L H K + C CGK+F + + +H+ + G
Sbjct: 18 CSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGV 76
Query: 117 VCDLCGASF 125
+ G S
Sbjct: 77 EGENSGPSS 85
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRH----SDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTR 705
+ C+ C K F + L H KR+ + C CG F M RH D +
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNCAGPD 74
Query: 706 PYLCTICSATF 716
+
Sbjct: 75 GVEGENSGPSS 85
Score = 45.6 bits (109), Expect = 1e-06
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTH----SDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIR 457
+ C CD+ F + L+ H + + + C C + F + H +
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCAGPD 74
Query: 458 PYQCTLCSASF 468
+ S
Sbjct: 75 GVEGENSGPSS 85
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 563 YTCDQCGKQLSYAKTLANHIK---GVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKS 619
Y C C K + L H K + C C K+F + +H+ +
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 620 FVCELCGASF 629
E G S
Sbjct: 76 VEGENSGPSS 85
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/124 (14%), Positives = 32/124 (25%), Gaps = 47/124 (37%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAG 507
R H+ +PY C+ C +F++ L H K +
Sbjct: 6 SGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRY--------------------HDPNFV 44
Query: 508 CKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCD 566
+ C +C F+ ++ M +HA G +
Sbjct: 45 PAA----------------------FVCSKCGKTFTRRNTMARHADNC---AGPDGVEGE 79
Query: 567 QCGK 570
G
Sbjct: 80 NSGP 83
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQ---DVHSTTRPYLCTICSATFKTAR 720
S + H+ +PY C C F+ + H + D + ++C+ C TF
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 721 ALKQHGRTH 729
+ +H
Sbjct: 62 TMARHADNC 70
Score = 34.4 bits (80), Expect = 0.014
Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 251 QCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHS 310
CS C +TF+ K L H +K +P + + C C TFT + + H +
Sbjct: 17 ACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAF----VCSKCGKTFTRRNTMARHADNCA 71
Query: 311 IERSYTCHHCGK 322
+ G
Sbjct: 72 GPDGVEGENSGP 83
Score = 29.4 bits (67), Expect = 0.96
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
Query: 160 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHN-----CNLCSATFKTA 214
S + H+ +PY C C F+ + H + + C+ C TF
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 215 RGLKQHEKKH 224
+ +H
Sbjct: 61 NTMARHADNC 70
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 58.2 bits (142), Expect = 5e-11
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 415 SKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHL 474
+ H +PYKCD C+ F++ ++ HK VH+ +PY+C +C A F R ++L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANL 61
Query: 475 KQHGKTH 481
K H + H
Sbjct: 62 KTHTRIH 68
Score = 47.8 bits (115), Expect = 2e-07
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRL 361
H ++ Y C C NL+ H K+VH K + C++C F A L+
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 362 HKLIHSEER 370
H IHS E+
Sbjct: 64 HTRIHSGEK 72
Score = 47.4 bits (114), Expect = 3e-07
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 101 SELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYS 160
HS + K + CD C ASF+ + L SHK + E Y+ C +CG +F + +
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYR--CNICGAQFNRPAN 60
Query: 161 LYEHMKRHSDVRPY 174
L H + HS +PY
Sbjct: 61 LKTHTRIHSGEKPY 74
Score = 45.1 bits (108), Expect = 2e-06
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 387 LWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQ 446
H + + + +KC C F L SH H+ +PY+C+IC F +++
Sbjct: 5 HHHHSHMTHS--DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 447 MHKRCVHSNIRPY 459
H R +HS +PY
Sbjct: 63 THTR-IHSGEKPY 74
Score = 45.1 bits (108), Expect = 2e-06
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 328 SNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPAL 387
+ H + K + CD C SF + L HK +H+ E+ + C++CGA F + L
Sbjct: 3 HHHHHH-SHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61
Query: 388 WAHKKLH 394
H ++H
Sbjct: 62 KTHTRIH 68
Score = 44.0 bits (105), Expect = 5e-06
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALK 723
+ H +PYKCD C F+ ++ H + VH+ +PY C IC A F LK
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 724 QHGRTH 729
H R H
Sbjct: 63 THTRIH 68
Score = 42.8 bits (102), Expect = 1e-05
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
CD C SF L H +H+ +K + C++CGA F + + L +H +
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
Score = 41.3 bits (98), Expect = 3e-05
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
CD+C F +LA H K VH K + C+ICG F + LK H+ IHS +K
Sbjct: 20 CDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 40.9 bits (97), Expect = 6e-05
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
++C C F +L H H+ +PY+C+ICG F ++ H +HS +PY
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGEKPY 74
Score = 39.7 bits (94), Expect = 1e-04
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 129 SCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYD 188
H H + YK C C F +L H H+ +PY+C+ICG F +
Sbjct: 3 HHHHHHSHMTHSDKPYK--CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN 60
Query: 189 MLRHK 193
+ H
Sbjct: 61 LKTHT 65
Score = 37.0 bits (87), Expect = 0.001
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
K + C+ C SF L H VH+ +K + C +CGA F + L +H +
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
Score = 36.3 bits (85), Expect = 0.002
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQK 618
Y CD+C Y LA+H K VH K + C C F A L+ H+ +HS +K
Sbjct: 18 YKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 35.9 bits (84), Expect = 0.004
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
C C+ +F K L SH H+ E+ Y C+ CG Q +NL H
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 34.0 bits (79), Expect = 0.015
Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 51/112 (45%)
Query: 446 QMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQST 503
H + + +PY+C C ASF+ +L H H KP
Sbjct: 6 HHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKP------------------- 45
Query: 504 EEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
Y C C QF+ ++++ H + H
Sbjct: 46 -----------------------------YRCNICGAQFNRPANLKTHTRIH 68
Score = 32.8 bits (76), Expect = 0.035
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 12/71 (16%)
Query: 160 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKT 213
+ H +PYKCD C F+ ++ HK +H CN+C A F
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHK------TVHTGEKPYRCNICGAQFNR 57
Query: 214 ARGLKQHEKKH 224
LK H + H
Sbjct: 58 PANLKTHTRIH 68
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 57.8 bits (141), Expect = 6e-11
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 414 NSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSH 473
+ + R YKCD C + F + D+ H+R H+ +PY+C C +F + SH
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSH 61
Query: 474 LKQHGKTH 481
L H + H
Sbjct: 62 LIGHHRVH 69
Score = 51.3 bits (124), Expect = 1e-08
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 359 LRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLN 418
+ E R + CD CG SF L H++ H E +KC C + F + S L
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG--EKPYKCDECGKAFIQRSHLI 63
Query: 419 SHMRTHSDVRPYK 431
H R H+ P
Sbjct: 64 GHHRVHTGSGPSS 76
Score = 47.8 bits (115), Expect = 2e-07
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 101 SELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYS 160
+ + E++ + CD CG SF S L H++ + E YK C CGK F++
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK--CDECGKAFIQRSH 61
Query: 161 LYEHMKRHSDVRPYK 175
L H + H+ P
Sbjct: 62 LIGHHRVHTGSGPSS 76
Score = 46.3 bits (111), Expect = 9e-07
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 70 SSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRS 129
SS S R + + + + CD CGKSF +S+L +H H+ +K + CD CG +F QRS
Sbjct: 2 SSGSSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60
Query: 130 CLWSHK 135
L H
Sbjct: 61 HLIGHH 66
Score = 44.7 bits (107), Expect = 2e-06
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 328 SNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPAL 387
+ + + + + CD C KSF + + L H+ H+ E+ + CD CG +F QR L
Sbjct: 4 GSSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 388 WAHKKLH 394
H ++H
Sbjct: 63 IGHHRVH 69
Score = 43.6 bits (104), Expect = 8e-06
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRL 361
R Y C CGK +S+LS H + H K + CD C K+F+ R+ L
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 362 HKLIHSEER 370
H +H+
Sbjct: 65 HHRVHTGSG 73
Score = 43.2 bits (103), Expect = 8e-06
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALK 723
S + + R YKCD CG F + D+ +H + H+ +PY C C F L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 724 QHGRTH 729
H R H
Sbjct: 64 GHHRVH 69
Score = 42.8 bits (102), Expect = 1e-05
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLY 666
+ E++ + C+ CG SF + L H++ + E YK C CGK F++ L
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYK--CDECGKAFIQRSHLI 63
Query: 667 EHMKRHSDVRPYK 679
H + H+ P
Sbjct: 64 GHHRVHTGSGPSS 76
Score = 41.7 bits (99), Expect = 3e-05
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 383 QRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFN 442
+ + ++KC C + F +S L+ H RTH+ +PYKCD C + F
Sbjct: 2 SSGSSGRSEWQQRE--RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59
Query: 443 YDIQMHKRCVHSNIRPY 459
+ H R VH+ P
Sbjct: 60 SHLIGHHR-VHTGSGPS 75
Score = 40.5 bits (96), Expect = 8e-05
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
++C CGK F + L +H + H+ +PYKCD CG F ++ H VH+ + P
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVHTGSGPS 75
Score = 40.1 bits (95), Expect = 1e-04
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 127 QRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLN 186
+ E YK C CGK F + L +H + H+ +PYKCD CG F
Sbjct: 2 SSGSSGRSEWQQRERRRYK--CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59
Query: 187 YDMLRHK 193
++ H
Sbjct: 60 SHLIGHH 66
Score = 38.2 bits (90), Expect = 5e-04
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
CD+CGK F+ S L++H + H K + CD CGK+F S L H +H+
Sbjct: 21 CDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73
Score = 36.7 bits (86), Expect = 0.002
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
+++ C+ C KSF ++L +H H+ +K + C+ CG +F QR+ L H
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66
Score = 34.0 bits (79), Expect = 0.015
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANH 581
Y C++C FS SD+ KH +TH G + Y CD+CGK L H
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTH---TGEKPYKCDECGKAFIQRSHLIGH 65
Score = 33.2 bits (77), Expect = 0.029
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
+C C +F+ L H +TH+ E+ Y C CGK S+L H
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Score = 32.4 bits (75), Expect = 0.066
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 545 KSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFS 603
+ R Y CD+CGK S++ L+ H + H K + C+ C K+F
Sbjct: 3 SGSSGRSEWQQ---RERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQ 58
Query: 604 LAELRQHSPVHSEQK 618
+ L H VH+
Sbjct: 59 RSHLIGHHRVHTGSG 73
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 57.4 bits (139), Expect = 8e-11
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLH-DAKLEYKFKCILCDRKFHRNSKLNSHMRTH 424
S G C++CG + +Q+ +L H++ H + +F C C ++F + + +H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 425 SDVRPYKC 432
Sbjct: 62 HPALLLAP 69
Score = 56.3 bits (136), Expect = 3e-10
Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDV---RPYKCDICEQHFKFNYDIQMHKRCVHSNIRP 458
+C +C + + LN H R H++ + C+ C + F+ + H+ H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 459 YQCTLCSASF 468
S
Sbjct: 68 APQESSGPSS 77
Score = 52.8 bits (127), Expect = 4e-09
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERG---FVCDLCGASFKQRPALWAHKKLH 394
C++C + +A L H+ H+E F C+ CG F++ ++ AH+
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 52.4 bits (126), Expect = 5e-09
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKG---FVCDLCGASFKQRSCLWSHKKWNHEEL 142
C+ICG + + L H H+E F C+ CG F++ + +H+ +H L
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 143 SYK 145
Sbjct: 66 LLA 68
Score = 52.4 bits (126), Expect = 5e-09
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYK-FECTLCGKKFVKNYSLYEHMKR- 167
S G C++CG + +Q++ L H++ + E ++ F C CGK+F K S+ H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 168 HSDVRPYKCDICG 180
H + + G
Sbjct: 62 HPALLLAPQESSG 74
Score = 52.4 bits (126), Expect = 6e-09
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVHLKIKK 591
CE C K+ + H + H + + C+ CGK+ ++A H H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 592 HSCENCAKSF 601
E+ S
Sbjct: 68 APQESSGPSS 77
Score = 52.0 bits (125), Expect = 9e-09
Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDV---RPYKCDICGHGFKLNYDMLRHKQDVHSTTRP 706
+C +CG + SL H ++H++ + C+ CG F+ + H+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 707 YLCTICSATF 716
+
Sbjct: 68 APQESSGPSS 77
Score = 51.3 bits (123), Expect = 1e-08
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 614 HSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK-FECTLCGKKFVKNYSLYEHMKR- 671
S CE+CG + +Q+ L H++ + E + F C CGK+F K S+ H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 672 HSDVRPYKCDICG 684
H + + G
Sbjct: 62 HPALLLAPQESSG 74
Score = 49.3 bits (118), Expect = 8e-08
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSI---ERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDH 344
QC +C T K L H + H+ + C CGK+ +++ H H +
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 345 SCDVCDKSF 353
+ S
Sbjct: 69 PQESSGPSS 77
Score = 48.6 bits (116), Expect = 1e-07
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDV---RPYKCDICGHGFKLNYDMLRHKQDVHSNIIH 202
+C +CG + SL H ++H++ + C+ CG F+ + H+ H ++
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 203 NCNLCSA 209
S
Sbjct: 68 APQESSG 74
Score = 47.4 bits (113), Expect = 3e-07
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 424 HSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNI---RPYQCTLCSASFKRSSHLKQHGKT 480
S +C+IC + + H+R H+ + C C F++ + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 481 H 481
Sbjct: 61 S 61
Score = 45.1 bits (107), Expect = 2e-06
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQ---KSFVCELCGASFKQRTCLWSHKKWNHEEL 646
CE C + A L H H+E F CE CG F++ + +H+ +H L
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 647 IYK 649
+
Sbjct: 66 LLA 68
Score = 44.7 bits (106), Expect = 3e-06
Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTT---RPYLCTICSATFKTARALKQHGRT 728
S +C+ICG + + H++ H+ T + C C F+ ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 729 H 729
Sbjct: 61 S 61
Score = 44.7 bits (106), Expect = 3e-06
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 309 HSIERSYTCHHCGKQLCGASNLSLHIK--SVHLKIKDHSCDVCDKSFVNRAGLRLHKLI- 365
S C CG ++L+ H + + + C+ C K F + H+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 366 HSEERGFVCDLCGASF 381
H + G S
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 42.8 bits (101), Expect = 1e-05
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKI---KHHWCDICGKSFFAASELKQHSFI-HSEQKGF 116
C+ CG SL H + H + C+ CGK F + H H
Sbjct: 10 CEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 117 VCDLCGASF 125
+ G S
Sbjct: 69 PQESSGPSS 77
Score = 40.5 bits (95), Expect = 9e-05
Identities = 16/118 (13%), Positives = 27/118 (22%), Gaps = 44/118 (37%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEEAGCKCNM 512
S QC +C + ++ + L H + H E
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKH---------------------AETVAAL--- 37
Query: 513 MLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGK 570
+ CE C +F + H PA+ + G
Sbjct: 38 -------------------RFPCEFCGKRFEKPDSVAAHRSKSHPAL-LLAPQESSGP 75
Score = 40.1 bits (94), Expect = 1e-04
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 168 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNII----HNCNLCSATFKTARGLKQHEKK 223
S +C+ICG + + H++ H+ + C C F+ + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 224 HMTSILLTCDQC 235
++LL +
Sbjct: 61 SHPALLLAPQES 72
Score = 31.2 bits (71), Expect = 0.18
Identities = 14/77 (18%), Positives = 18/77 (23%), Gaps = 6/77 (7%)
Query: 250 LQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTH 309
LQC +C T + K SL H C C F + +H
Sbjct: 8 LQCEICGFTCRQKASLNWH-----QRKHAETVAALRF-PCEFCGKRFEKPDSVAAHRSKS 61
Query: 310 SIERSYTCHHCGKQLCG 326
G
Sbjct: 62 HPALLLAPQESSGPSSG 78
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 57.2 bits (139), Expect = 1e-10
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 400 YKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD--ICEQHFKFNYDIQMHKRCVHSNIR 457
Y C + F ++++L H +H+ PY+C C++ F ++ H++ VH+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60
Query: 458 PYQCTLCSASFKRSSHLKQH 477
+ CS K + +H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 49.9 bits (120), Expect = 4e-08
Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCD--ICGKSFFAASELKQHSFIHSEQ 113
C + CGK F L H + H + + C C K F S LK+H +H+
Sbjct: 3 VCH--FENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59
Query: 114 KGFVCDLCGASFKQRSCLWSHKKWNH 139
D C K + H H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 49.5 bits (119), Expect = 6e-08
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 372 FVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRP 429
+VC CG +FK+ L H+ H +L Y+ CD++F S+L H + H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 430 YKCDICEQHFKFNYDIQMHKRCVH 453
K D C K H H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 47.2 bits (113), Expect = 4e-07
Identities = 27/105 (25%), Positives = 37/105 (35%), Gaps = 28/105 (26%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCG 152
CGK+F ++LK H F H++Q + C HE C
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYEC-------------------PHEG---------CD 40
Query: 153 KKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
K+F L H K H+ K D C K L+H + H
Sbjct: 41 KRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 46.5 bits (111), Expect = 9e-07
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 622 CELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
E CG +FK+ L H+ + ++L Y+ C K+F L H K H+ K D
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 65
Query: 682 ICGHGFKLNYDMLRHKQDVH 701
C K L+H + H
Sbjct: 66 SCSFVGKTWTLYLKHVAECH 85
Score = 46.1 bits (110), Expect = 1e-06
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 647 IYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHSTT 704
+Y CGK F K+ L H H+ PY+C C F L + RH++ VH+
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGY 59
Query: 705 RPYLCTICSATFKTARAL-KQHGRTH 729
CS KT K H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 38.0 bits (89), Expect = 0.001
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHS-NI 200
Y CGK F K+ L H H+ PY+C C F L + RH++ VH+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60
Query: 201 IHNCNLCSATFKTARGLKQHEKK 223
+ CS KT +H +
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAE 83
Score = 37.6 bits (88), Expect = 0.001
Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 27/104 (25%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDV 348
C F +LK H +H+ + Y C H G
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG--------------------------- 38
Query: 349 CDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKK 392
CDK F + L+ H+ +H+ D C K H
Sbjct: 39 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 31.8 bits (73), Expect = 0.12
Identities = 10/47 (21%), Positives = 15/47 (31%)
Query: 292 CKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
C F+ +LK H K H+ C + H+ H
Sbjct: 39 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 30.3 bits (69), Expect = 0.37
Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 534 SCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQ--CGKQLSYAKTLANHIKGVHLKIK 590
E C F + ++ H +H Y C C K+ S L H K VH
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSH---TQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60
Query: 591 KHSCENCAKSFFSLAELRQH 610
++C+ + +H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 56.8 bits (138), Expect = 2e-10
Identities = 30/77 (38%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 110 HSEQKGFVCDL--CGASFKQRSCLWSHKKWNH-EELSYKFECTLCGKKFVKNYSLYEHMK 166
S G CD CG F R L HKK+ H + S+ CGK F L EHMK
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 167 RHSDVRPYKCDICGHGF 183
HSD R Y C+ G
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 56.0 bits (136), Expect = 3e-10
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 56 KCDIMCDQCGKHFTSSQSLARHIKCVHLKIKHHWCD--ICGKSFFAASELKQHSFIHSEQ 113
CD CG+ F++ Q L H K H+ K C CGKSF LK+H +HS+
Sbjct: 9 PCD--FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66
Query: 114 KGFVCDLCGASF 125
+ ++C+ G S
Sbjct: 67 RDYICEFSGPSS 78
Score = 52.6 bits (127), Expect = 5e-09
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 366 HSEERGFVCDL--CGASFKQRPALWAHKKL-HDAKLEYKFKC--ILCDRKFHRNSKLNSH 420
S G CD CG F R L HKK H + F C C + F+ L H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--QKSFSCPEPACGKSFNFKKHLKEH 59
Query: 421 MRTHSDVRPYKCDIC 435
M+ HSD R Y C+
Sbjct: 60 MKLHSDTRDYICEFS 74
Score = 52.6 bits (127), Expect = 5e-09
Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 614 HSEQKSFVCEL--CGASFKQRTCLWSHKKWNH-EELIYKFECTLCGKKFVKNYSLYEHMK 670
S C+ CG F R L HKK+ H + + CGK F L EHMK
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 671 RHSDVRPYKCDICGHGF 687
HSD R Y C+ G
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 52.2 bits (126), Expect = 6e-09
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 309 HSIERSYTCHH--CGKQLCGASNLSLHIKSVHLKIKDHSCD--VCDKSFVNRAGLRLHKL 364
S C CG+ L+ H K H+ K SC C KSF + L+ H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 365 IHSEERGFVCDLCGASF 381
+HS+ R ++C+ G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 49.1 bits (118), Expect = 8e-08
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 16/83 (19%)
Query: 424 HSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPYQCT--LCSASFKRSSHLKQHGK 479
S CD C + F + HK+ H + + + C C SF HLK+H K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 480 THI--KPEHDLKTKMNLFTCHQC 500
H + + C
Sbjct: 62 LHSDTRD----------YICEFS 74
Score = 46.8 bits (112), Expect = 5e-07
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 400 YKFKCILCDRKFHRNSKLNSHMR-THSDVRPYKCD--ICEQHFKFNYDIQMHKRCVHSNI 456
C R F LN H + H + + C C + F F ++ H + +HS+
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDT 66
Query: 457 RPYQCTLCSASF 468
R Y C S
Sbjct: 67 RDYICEFSGPSS 78
Score = 45.6 bits (109), Expect = 1e-06
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 563 YTCD--QCGKQLSYAKTLANHIKGVHLKIKKHSCE--NCAKSFFSLAELRQHSPVHSEQK 618
CD CG+ S + L +H K H+ K SC C KSF L++H +HS+ +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 619 SFVCELCGASF 629
++CE G S
Sbjct: 68 DYICEFSGPSS 78
Score = 44.5 bits (106), Expect = 4e-06
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 650 FECTL--CGKKFVKNYSLYEHMK-RHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHSTT 704
C CG+ F L H K +H + + C CG F + H +HS T
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLHSDT 66
Query: 705 RPYLCTICSATF 716
R Y+C +
Sbjct: 67 RDYICEFSGPSS 78
Score = 39.1 bits (92), Expect = 3e-04
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 672 HSDVRPYKCDI--CGHGFKLNYDMLRHKQDVHSTTRPYLCT--ICSATFKTARALKQHGR 727
S CD CG F + HK+ H + + C C +F + LK+H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 728 TH 729
H
Sbjct: 62 LH 63
Score = 33.3 bits (77), Expect = 0.032
Identities = 21/124 (16%), Positives = 29/124 (23%), Gaps = 55/124 (44%)
Query: 453 HSNIRPYQCTL--CSASFKRSSHLKQHGK---THIKPEHDLKTKMNLFTCHQCQSTEEAG 507
S C C F +L H K H K F+C +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS----------FSCPE-------- 43
Query: 508 CKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCD 566
C F+ K +++H K H R Y C+
Sbjct: 44 ----------------------------PACGKSFNFKKHLKEHMKLHS---DTRDYICE 72
Query: 567 QCGK 570
G
Sbjct: 73 FSGP 76
Score = 32.5 bits (75), Expect = 0.051
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 290 PVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGK 322
P C +F K+ LK H+K HS R Y C G
Sbjct: 44 PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76
Score = 32.1 bits (74), Expect = 0.073
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 534 SCEQCKVQFSCKSDMRKHAK-THLPAIG-RSYTCDQ--CGKQLSYAKTLANHIKGVHLKI 589
C FS + + H K H I +S++C + CGK ++ K L H+K +H
Sbjct: 11 DFPGCGRIFSNRQYLNHHKKYQH---IHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDT 66
Query: 590 KKHSCENCAKSF 601
+ + CE S
Sbjct: 67 RDYICEFSGPSS 78
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 51.7 bits (125), Expect = 7e-09
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 422 RTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ S P KC C +++H+R +H RP++C CS K+ S+L +H K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 45.6 bits (109), Expect = 1e-06
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
C C S ++A LR+H+ IH +R F C+ C KQ L H K
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 45.6 bits (109), Expect = 1e-06
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKR 450
KC C + L H R H RP+KC+ C K ++ H +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 43.3 bits (103), Expect = 8e-06
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTH 424
S C C S + AL H+++H + FKC C + S L+ HM+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCT--DRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 42.9 bits (102), Expect = 1e-05
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
C C S + + L+ H IH + F C+ C KQ S L H K
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 42.5 bits (101), Expect = 1e-05
Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 308 THSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIH 366
+ S C C + L +H + +H + C+ C + L H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+C+ C +L H + H RP+KC+ C K ++ +H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHK 697
+C+ C +L H + H RP+KC+ C K ++ +H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57
Score = 41.3 bits (98), Expect = 3e-05
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 60 MCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIH 110
C +C +S +L H + +H + C+ C S L +H
Sbjct: 11 KCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 40.2 bits (95), Expect = 8e-05
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S P KC C + + H + +H T RP+ C CS K L +H +
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 37.9 bits (89), Expect = 7e-04
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIK 335
C C + + K L+ H + H +R + C++C SNLS H+K
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 37.5 bits (88), Expect = 7e-04
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRH 168
S C C S ++ L H++ + + +K C C + +L +HMK+
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFK--CNYCSFDTKQPSNLSKHMKKF 60
Score = 35.6 bits (83), Expect = 0.004
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIK 583
C +C S K+ +R H + H R + C+ C L+ H+K
Sbjct: 10 EKCSECSYSCSSKAALRIHERIH---CTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 35.2 bits (82), Expect = 0.005
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 613 VHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRH 672
S C C S + L H++ + + +K C C + +L +HMK+
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFK--CNYCSFDTKQPSNLSKHMKKF 60
Score = 35.2 bits (82), Expect = 0.006
Identities = 17/51 (33%), Positives = 21/51 (41%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
C C+ S S A LR H +H + F C C KQ + L H K
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 32.1 bits (74), Expect = 0.070
Identities = 16/106 (15%), Positives = 26/106 (24%), Gaps = 50/106 (47%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEEAGCK 509
S+ P +C+ CS S + L+ H + H +P
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRP------------------------- 37
Query: 510 CNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
+ C C S++ KH K
Sbjct: 38 -----------------------FKCNYCSFDTKQPSNLSKHMKKF 60
Score = 31.7 bits (73), Expect = 0.084
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSF 620
C +C S L H + +H + C C+ + L +H S
Sbjct: 10 EKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66
Score = 30.2 bits (69), Expect = 0.31
Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 12/63 (19%)
Query: 168 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQHE 221
S P KC C + + H++ IH CN CS K L +H
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHER------IHCTDRPFKCNYCSFDTKQPSNLSKHM 57
Query: 222 KKH 224
KK
Sbjct: 58 KKF 60
Score = 25.9 bits (58), Expect = 9.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 700 VHSTTRPYLCTICSATFKTARALKQHGRTH 729
S+ P C+ CS + + AL+ H R H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIH 32
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 51.7 bits (125), Expect = 9e-09
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 417 LNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQ 476
+ HS +PY C C + F + + H+R VH+ +PY+C C +F ++S L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 477 HGKTH 481
H + H
Sbjct: 61 HQRIH 65
Score = 50.5 bits (122), Expect = 2e-08
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 358 GLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKL 417
G IHS E+ + C CG +F + L H+++H E +KC+ C + F +NS L
Sbjct: 1 GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG--EKPYKCLECGKAFSQNSGL 58
Query: 418 NSHMRTHSDVRPY 430
+H R H+
Sbjct: 59 INHQRIHTSGPSS 71
Score = 45.9 bits (110), Expect = 8e-07
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 103 LKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLY 162
S IHS +K + C CG +F + S L H++ + E YK C CGK F +N L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK--CLECGKAFSQNSGLI 59
Query: 163 EHMKRHSDVRPY 174
H + H+
Sbjct: 60 NHQRIHTSGPSS 71
Score = 45.2 bits (108), Expect = 2e-06
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
+ C CGK F ++ L +H + H+ +PYKC CG F N ++ H Q +H++
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIHTSGPSS 71
Score = 44.4 bits (106), Expect = 4e-06
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 665 LYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQ 724
HS +PY C CG F + +++H Q VH+ +PY C C F L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 725 HGRTH 729
H R H
Sbjct: 61 HQRIH 65
Score = 43.2 bits (103), Expect = 7e-06
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRL 361
HS E+ Y C CGK +S L H + VH K + C C K+F +GL
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 362 HKLIHSEER 370
H+ IH+
Sbjct: 61 HQRIHTSGP 69
Score = 42.8 bits (102), Expect = 1e-05
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLY 666
S +HS +K + C CG +F + + L H++ + E YK C CGK F +N L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYK--CLECGKAFSQNSGLI 59
Query: 667 EHMKRHSDVRPY 678
H + H+
Sbjct: 60 NHQRIHTSGPSS 71
Score = 42.5 bits (101), Expect = 2e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
C CGK+F +S L QH +H+ +K + C CG +F Q S L +H++
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Score = 42.1 bits (100), Expect = 2e-05
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
+ C+ C + F R+S L H R H+ +PYKC C + F N + H+R +H++
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR-IHTSGPSS 71
Score = 41.7 bits (99), Expect = 3e-05
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
+ C CGK F ++ L +H + H+ +PYKC CG F N ++ H Q +H+
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIHT 66
Score = 41.3 bits (98), Expect = 4e-05
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
C +CGK F+ S L +H + VH K + C CGK+F S L H IH+
Sbjct: 17 CVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69
Score = 40.1 bits (95), Expect = 1e-04
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
K + C C K+F + L H+ +H+ E+ + C CG +F Q L H+++H
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 35.5 bits (83), Expect = 0.004
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
K + C C K+F + L QH VH+ +K + C CG +F Q + L +H++
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Score = 34.4 bits (80), Expect = 0.011
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSF 620
Y C +CGK S + L H + VH K + C C K+F + L H +H+ S
Sbjct: 15 YGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 33.2 bits (77), Expect = 0.025
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
C C F+ L H + H+ E+ Y C CGK S L H
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 33.2 bits (77), Expect = 0.031
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANH 581
Y C +C FS S + +H + H G + Y C +CGK S L NH
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVH---TGEKPYKCLECGKAFSQNSGLINH 61
Score = 31.7 bits (73), Expect = 0.11
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 12/70 (17%)
Query: 161 LYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHN------CNLCSATFKTA 214
HS +PY C CG F + +++H++ +H C C F
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR------VHTGEKPYKCLECGKAFSQN 55
Query: 215 RGLKQHEKKH 224
GL H++ H
Sbjct: 56 SGLINHQRIH 65
Score = 29.7 bits (68), Expect = 0.44
Identities = 24/110 (21%), Positives = 31/110 (28%), Gaps = 51/110 (46%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHI--KPEHDLKTKMNLFTCHQCQSTEE 505
+HS +PY C C +F RSS L QH + H KP
Sbjct: 5 SSG-IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP--------------------- 42
Query: 506 AGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
Y C +C FS S + H + H
Sbjct: 43 ---------------------------YKCLECGKAFSQNSGLINHQRIH 65
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 48.3 bits (116), Expect = 7e-08
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTA 719
S +PY C CG GF + H + VH++ RP+ C + + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54
Score = 46.4 bits (111), Expect = 4e-07
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSF 353
S + S+ + Y C CGK +L+ HIK VH + H C V
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 45.3 bits (108), Expect = 9e-07
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASF 468
S + S +PY C C + F + H + VH++ RP++C + +
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 42.2 bits (100), Expect = 1e-05
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 146 FECTLCGKKFVKNYSLYEHMKR-HSDVRPYKCDICGHGF 183
+ C CGK F + L H+K+ H+ RP+KC + G
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 40.3 bits (95), Expect = 6e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSF 97
C CGK F+ L HIK VH + H C +
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.5 bits (93), Expect = 1e-04
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 402 FKCILCDRKFHRNSKLNSHM-RTHSDVRPYKCDICEQHF 439
+ C C + F R LN H+ + H+ RP+KC +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 37.2 bits (87), Expect = 7e-04
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHE-ELSYKFECTLCGKKF 155
S K ++C CG F + L H K H E +K C +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK--CQVWVSGP 51
Score = 36.8 bits (86), Expect = 0.001
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSF 601
Y C CGK S L HIK VH + H C+
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 36.4 bits (85), Expect = 0.001
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 31/79 (39%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHM 669
S K ++C+ CG F + H L H+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRP----DH--------------------------LNGHI 32
Query: 670 KR-HSDVRPYKCDICGHGF 687
K+ H+ RP+KC + G
Sbjct: 33 KQVHTSERPHKCQVWVSGP 51
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGK 479
S +PY C C F R HL H K
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIK 33
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSN-IIHNCNLCSATFKTA 214
S +PY C CG GF + H + VH++ H C + + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 334 IKSVHLKIKDHSCDVCDKSFVNRAGLRLH-KLIHSEERGFVCDLCGASF 381
S K + C C K F L H K +H+ ER C + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 34.9 bits (81), Expect = 0.005
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 90 CDICGKSFFAASELKQHS-FIHSEQKGFVCDLCGASF 125
C CGK F L H +H+ ++ C + +
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 32.9 bits (76), Expect = 0.023
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 582 IKGVHLKIKKHSCENCAKSFFSLAELRQHS-PVHSEQKSFVCELCGASF 629
K + C++C K F L H VH+ ++ C++ +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 27.2 bits (61), Expect = 2.6
Identities = 11/45 (24%), Positives = 14/45 (31%), Gaps = 5/45 (11%)
Query: 533 YSCEQCKVQFSCKSDMRKHAK-THLPAIG-RSYTCDQCGKQLSYA 575
Y C+ C FS + H K H R + C S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVH---TSERPHKCQVWVSGPSSG 54
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 46.3 bits (111), Expect = 4e-07
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 428 RPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHG-KTH 481
R + C++C + F ++ H R H+N +PY C LC+ +F R L +H K H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 44.8 bits (107), Expect = 2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
F C +C + F + L H + H++ +PY C +C F ++RH Q +HS
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 44.8 bits (107), Expect = 2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 702
F C +C + F + L H + H++ +PY C +C F ++RH Q +HS
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 42.9 bits (102), Expect = 9e-06
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNH 139
C++C ++F LK+H H+ +K + C LC +F +R L H + H
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 42.5 bits (101), Expect = 1e-05
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHS 454
F C +C R F R L H R+H++ +PY C +C + F + H + +HS
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 39.0 bits (92), Expect = 2e-04
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAH-KKLH 394
+ C+VC ++F + L+ H H+ E+ + C LC +F +R L H +K+H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 38.6 bits (91), Expect = 2e-04
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHS 107
C+ C + F + L RH + H K + C +C ++F L +H+
Sbjct: 5 CEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 37.1 bits (87), Expect = 8e-04
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 676 RPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHG-RTH 729
R + C++C F + RH H+ +PY C +C+ F L +H + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 35.5 bits (83), Expect = 0.003
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
C VC F + LK H ++H+ E+ Y C C + L H + +H
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 34.8 bits (81), Expect = 0.006
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNH 643
+ CE C ++F L++H H+ +K + C LC +F +R L H + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 32.5 bits (75), Expect = 0.035
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 114 KGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKR 167
+ FVC++C +F ++ L H + + E Y C LC + F + L H ++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYP--CGLCNRAFTRRDLLIRHAQK 52
Score = 32.5 bits (75), Expect = 0.039
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIG-RSYTCDQCGKQLSYAKTLANHIKGVH 586
+ CE C F+ + +++H ++H + Y C C + + L H + +H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH---TNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 32.1 bits (74), Expect = 0.048
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 313 RSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLH-KLIHSEERG 371
RS+ C C + +L H +S H K + C +C+++F R L H + IHS G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLG 59
Score = 29.0 bits (66), Expect = 0.77
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHS 611
RS+ C+ C + + + L H + H K + C C ++F L +H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 28.2 bits (64), Expect = 1.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 61 CDQCGKHFTSSQSLARHIKCVH 82
C C + FT L RH + +H
Sbjct: 33 CGLCNRAFTRRDLLIRHAQKIH 54
Score = 26.3 bits (59), Expect = 5.8
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 12/58 (20%)
Query: 172 RPYKCDICGHGFKLNYDMLRHKQDVHSNIIH------NCNLCSATFKTARGLKQHEKK 223
R + C++C F + RH + H C LC+ F L +H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR------SHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 51.4 bits (122), Expect = 9e-07
Identities = 89/651 (13%), Positives = 159/651 (24%), Gaps = 231/651 (35%)
Query: 87 HHWCDICGKSFFAASELKQHSF---IHSEQKGFVCDL-CG-------ASFKQRSCLWSHK 135
HH D F E Q+ + + + FV + C + +
Sbjct: 4 HHHMD------FETGEH-QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM 56
Query: 136 KWNHEELSYKFECTLCGK------KFV-----KNYS--------------------LYEH 164
+ + + TL K KFV NY + +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 165 MKRHSDVRPYKCDICGHGFKLN------YDMLRH---KQDVHSNI-IHNCNLCSATFKTA 214
+ ++D + + K N Y LR + N+ I T+
Sbjct: 117 DRLYNDNQVFA--------KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 215 RGLKQHEKKHMTS--IL-LTCDQCHSTEEAGCKCNRQLLQ--CSLCSETFKSK-PSLRAH 268
++ + I L C+S E + L Q + S + S LR H
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 269 IWKCQ-----MEPQ--------------TILETYNILSQCPVCKLTFTDK---RKLKSHL 306
+ + +N+ C + LT K L +
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL--SCKIL-LTTRFKQVTDFLSAAT 285
Query: 307 KTH-SIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLI 365
TH S++ H L SL +K + + +D +V
Sbjct: 286 TTHISLD------HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT--------------T 325
Query: 366 HSEERGFVCDLCGASFKQRPALW------AHKKLH------------------------- 394
+ + S + A W KL
Sbjct: 326 NP----RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 395 --DAKLEYKFKCIL-CD----------RKFHRNSKLNSHMRTHSDVRPYKCDI----CEQ 437
A + ++ D K H+ S + + I E
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE------KQPKESTISIPSIYLEL 435
Query: 438 HFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRS---------SHLKQHGKTHIKPEHDL 488
K + +H+ V Y S SH+ H K PE
Sbjct: 436 KVKLENEYALHRSIVDH----YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE--- 488
Query: 489 KTKMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKS-- 546
+M LF ++ + KI + S +
Sbjct: 489 --RMTLFR----------------------MVFLDFRFLEQKIRHDSTAWNASGSILNTL 524
Query: 547 -DMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGV--HLKIKKHSC 594
++ + + Y CD K + + + + +L K++
Sbjct: 525 QQLKFY---------KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
Score = 49.5 bits (117), Expect = 4e-06
Identities = 75/564 (13%), Positives = 153/564 (27%), Gaps = 159/564 (28%)
Query: 13 CSETFKSKP---RLRAHIWKCQMEPETILET------------LGHQFESQLFTGPMEKC 57
SK W + E +++ L +++ P
Sbjct: 51 IDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTE-QRQPSMMT 109
Query: 58 DIMCDQCGKHFTSSQSLARH----IKCVHLKIKHHWCDI-------------CGKSFFAA 100
+ +Q + + +Q A++ ++ K++ ++ GK++ A
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 101 SELKQHSFIHSEQKGFVCDLCGASFKQRSCLW-SHKKWNHEELSYKFECTLCGKKFVKNY 159
+ C + F W + K N E + L + N+
Sbjct: 169 DVCLSYK--------VQCKMDFKIF------WLNLKNCNSPETVLEMLQKLL-YQIDPNW 213
Query: 160 -SLYEHMK----RHSDVRPYKCD-ICGHGFKLNYDMLRHKQDV-HSNIIHNCNLCSATFK 212
S +H R ++ + ++ +L +V ++ + NL
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL---NVQNAKAWNAFNLSCKILL 270
Query: 213 TAR-----------------------GLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQL 249
T R L E K + L C E N
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV-LTTN--P 327
Query: 250 LQCSLCSETFKSKPSLRAHIWK-------------C--QMEPQTILETYNILSQCP---- 290
+ S+ +E+ + + WK +EP + ++ LS P
Sbjct: 328 RRLSIIAESIRDGLA-TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 291 -----VCKL----------TFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIK 335
+ + +K S ++ E + + +L +
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE---NEY 443
Query: 336 SVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAH-KKLH 394
++H I DH + LI + G H K +
Sbjct: 444 ALHRSIVDH--------YNIPKTFDSDDLIPPYLDQYFYSHIG----------HHLKNIE 485
Query: 395 DAKLEYKFKCILCDRKF------HRNSKLN---SHMRTHSDVRPYKCDICEQHFKFN--- 442
+ F+ + D +F H ++ N S + T ++ YK IC+ K+
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 443 YDIQMH--KRCVHSNIR-PYQCTL 463
I + + + I Y L
Sbjct: 546 NAI-LDFLPKIEENLICSKYTDLL 568
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 45.8 bits (109), Expect = 9e-07
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 415 SKLNSHMRTHSDVRPYKCDI--CEQHFKFNYDIQMHKRCVHSNIRPYQCTL--CSASFKR 470
S + S +R + C C + + + ++ H R H+ +P+ C+ C F R
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFAR 61
Query: 471 SSHLKQHGKTH 481
S L +H +TH
Sbjct: 62 SDELSRHRRTH 72
Score = 38.1 bits (89), Expect = 5e-04
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 356 RAGLRLHKLIHSEERGFVCDL--CGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHR 413
+G ++ S R +C CG ++ + L AH + H + + C+R+F R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 414 NSKLNSHMRTH 424
+ +L+ H RTH
Sbjct: 62 SDELSRHRRTH 72
Score = 33.9 bits (78), Expect = 0.015
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 82 HLKIKHHWCDI--CGKSFFAASELKQHSFIHSEQKGFVCDL--CGASFKQRSCLWSHKK 136
+I+ H C CGK++F +S LK H+ H+ +K F C C F + L H++
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70
Score = 33.5 bits (77), Expect = 0.024
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 99 AASELKQHSFIHSEQKGFVCDL--CGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFV 156
+S S + +C CG ++ + S L +H + + E + C ++F
Sbjct: 1 GSSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA 60
Query: 157 KNYSLYEHMKRH 168
++ L H + H
Sbjct: 61 RSDELSRHRRTH 72
Score = 32.7 bits (75), Expect = 0.040
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 668 HMKRHSDVRPYKCDI--CGHGFKLNYDMLRHKQDVHSTTRPYLCTI--CSATFKTARALK 723
S +R + C CG + + + H + H+ +P+ C+ C F + L
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELS 66
Query: 724 QHGRTH 729
+H RTH
Sbjct: 67 RHRRTH 72
Score = 31.2 bits (71), Expect = 0.16
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 151 CGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHK 193
CGK + K+ L H + H+ +P+ C C F + ++ RH+
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 31.2 bits (71), Expect = 0.16
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 655 CGKKFVKNYSLYEHMKRHSDVRPYKCDI--CGHGFKLNYDMLRHK 697
CGK + K+ L H + H+ +P+ C C F + ++ RH+
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 30.4 bits (69), Expect = 0.33
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 64 CGKHFTSSQSLARHIKCVHLKIKHHWCDI--CGKSFFAASELKQHSFIH 110
CGK + S L H + H K C C + F + EL +H H
Sbjct: 25 CGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.0 bits (68), Expect = 0.42
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 586 HLKIKKHSC--ENCAKSFFSLAELRQHSPVHSEQKSFVC--ELCGASFKQRTCLWSHKK 640
+I+ H C C K++F + L+ H+ H+ +K F C + C F + L H++
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70
Score = 29.7 bits (67), Expect = 0.46
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 605 AELRQHSPVHSEQKSFVC--ELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKN 662
+ S +S +C CG ++ + + L +H + + E + C ++F ++
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 663 YSLYEHMKRH 672
L H + H
Sbjct: 63 DELSRHRRTH 72
Score = 28.9 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 290 PVCKLTFTDKRKLKSHLKTHSIERSYTCHH--CGKQLCGASNLSLHIKS 336
P C T+ LK+H +TH+ E+ ++C C ++ + LS H ++
Sbjct: 23 PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Score = 27.7 bits (62), Expect = 2.7
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 694 LRHKQDVHSTTRPYLCTI--CSATFKTARALKQHGRTH 729
Q S R ++C+ C T+ + LK H RTH
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 47.1 bits (111), Expect = 1e-06
Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 3/96 (3%)
Query: 100 ASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHE---ELSYKFECTLCGKKFV 156
S K + I + F C C A++ L H +
Sbjct: 4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKP 63
Query: 157 KNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRH 192
+ SL E + + KC CGH F+ D+ H
Sbjct: 64 RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 46.3 bits (109), Expect = 2e-06
Identities = 16/93 (17%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Query: 359 LRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHD---AKLEYKFKCILCDRKFHRNS 415
+L+ I + F C C A++ L H R
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 416 KLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMH 448
L + KC C F+ D+ +H
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 45.5 bits (107), Expect = 3e-06
Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 9/111 (8%)
Query: 127 QRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMK-----RHSDVRPYKCDICGH 181
S + ++ C C + L HM R + +
Sbjct: 3 SGSSGKLYGSIFTGASKFR--CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60
Query: 182 GFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQH--EKKHMTSILL 230
+L + + + C C +F++ + L H + KH +
Sbjct: 61 SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 45.1 bits (106), Expect = 6e-06
Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 4/105 (3%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHE---ELIYKFECTLCGKKFVKNY 663
+ + + + F C+ C A++ L H + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRH-KQDVHSTTRPY 707
SL E + + KC CGH F+ D+ H + H
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 44.0 bits (103), Expect = 1e-05
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 4/93 (4%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSV-HLKIKDHSCDVC---DKSFVNRA 357
K + + + C C L++H+ H + +H D S +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 358 GLRLHKLIHSEERGFVCDLCGASFKQRPALWAH 390
L + ++ C CG SF+ L H
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 44.0 bits (103), Expect = 1e-05
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 649 KFECTLCGKKFVKNYSLYEHMK-----RHSDVRPYKCDICGHGFKLNYDMLRHKQDVHST 703
KF C C + L HM R + + +L +
Sbjct: 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDA 77
Query: 704 TRPYLCTICSATFKTARALKQH 725
+ C C +F++ + L H
Sbjct: 78 QKVLKCMYCGHSFESLQDLSVH 99
Score = 42.4 bits (99), Expect = 4e-05
Identities = 19/104 (18%), Positives = 30/104 (28%), Gaps = 4/104 (3%)
Query: 69 TSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFI--HSEQKGFVCDLCGASFK 126
+S S + + C C ++ EL H H D
Sbjct: 2 SSGSSGKLY-GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60
Query: 127 QRSCLWSHKKWNHEELSYK-FECTLCGKKFVKNYSLYEHMKRHS 169
+ S + +E + K +C CG F L HM +
Sbjct: 61 SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 39.7 bits (92), Expect = 4e-04
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Query: 250 LQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTH 309
+C CS + + L H E + + + + KR L
Sbjct: 20 FRCKDCSAAYDTLVELTVH----MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75
Query: 310 SIERSYTCHHCGKQLCGASNLSLHIKSVH 338
++ C +CG +LS+H+
Sbjct: 76 DAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 37.8 bits (87), Expect = 0.002
Identities = 15/110 (13%), Positives = 30/110 (27%), Gaps = 14/110 (12%)
Query: 442 NYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQ 501
+++ + + ++C CSA++ L H D N +
Sbjct: 4 GSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 502 STEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKH 551
+ + L +D + C C F D+ H
Sbjct: 63 PRKRS-------------LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 37.4 bits (86), Expect = 0.002
Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 25/120 (20%)
Query: 157 KNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH-----SNIIHNCNLCSATF 211
S + + ++C C + ++ H + ++ N N +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 212 KTARGLKQHEKKHMTSILLTCDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHIWK 271
R L + E K +L C C +F+S L H+ K
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCG--------------------HSFESLQDLSVHMIK 102
Score = 36.7 bits (84), Expect = 0.005
Identities = 18/83 (21%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 61 CDQCGKHFTSSQSLARHIKCV-HLKIKHHWCD---ICGKSFFAASELKQHSFIHSEQKGF 116
C C + + L H+ H + +H D S L + QK
Sbjct: 22 CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81
Query: 117 VCDLCGASFKQRSCLWSHKKWNH 139
C CG SF+ L H
Sbjct: 82 KCMYCGHSFESLQDLSVHMIKTK 104
Score = 35.5 bits (81), Expect = 0.013
Identities = 18/87 (20%), Positives = 25/87 (28%), Gaps = 4/87 (4%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIKGV-HLKIKKHSCENCAKSFFSLAE---LRQHSPVHSE 616
+ C C L H+ H + H +N +S L +
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77
Query: 617 QKSFVCELCGASFKQRTCLWSHKKWNH 643
QK C CG SF+ L H
Sbjct: 78 QKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 34.0 bits (77), Expect = 0.037
Identities = 10/92 (10%), Positives = 20/92 (21%), Gaps = 12/92 (13%)
Query: 413 RNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCV----HSNIRPYQCTLCSASF 468
S + + ++C C + ++ +H N S
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 469 KRSSHLKQHGKTHIKPEHDLKTKMNLFTCHQC 500
R L + + C C
Sbjct: 63 PRKRSLLEMEGKE--------DAQKVLKCMYC 86
Score = 31.7 bits (71), Expect = 0.28
Identities = 6/73 (8%), Positives = 17/73 (23%), Gaps = 4/73 (5%)
Query: 661 KNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDV----HSTTRPYLCTICSATF 716
S + + ++C C + ++ H + +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 717 KTARALKQHGRTH 729
R+L +
Sbjct: 63 PRKRSLLEMEGKE 75
Score = 27.8 bits (61), Expect = 6.0
Identities = 18/101 (17%), Positives = 29/101 (28%), Gaps = 19/101 (18%)
Query: 6 SRLICSLCSETFKSKPRLRAHIWKCQMEPETILETLGHQFESQLFTGPMEKCDIMCDQCG 65
S+ C CS + + L H E+ + + D +
Sbjct: 18 SKFRCKDCSAAYDTLVELTV-----------------HMNETGHYRDDNHETD-NNNPKR 59
Query: 66 KHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQH 106
+SL + K C CG SF + +L H
Sbjct: 60 WSKPRKRSLLEMEGKEDAQ-KVLKCMYCGHSFESLQDLSVH 99
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 46.0 bits (108), Expect = 2e-06
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSF 620
Y C C +LS +H + C C+ FFS ++H E K
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHE-SKCEYKKL 70
Query: 621 VCELCGASFKQRTCLWSHKKWNHEE 645
C C +FK +W H+ H +
Sbjct: 71 TCLECMRTFKSSFSIWRHQVEVHNQ 95
Score = 43.0 bits (100), Expect = 3e-05
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHM 669
SPV ++ + + C LC A SH++ C C +F EH
Sbjct: 8 ASPVENK-EVYQCRLCNAKLSSLLEQGSHERLCRN----AAVCPYCSLRFFSPELKQEH- 61
Query: 670 KRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 702
+ + + C C FK ++ + RH+ +VH+
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 41.8 bits (97), Expect = 7e-05
Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 4/81 (4%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDL 120
C C +S H + C C FF+ ++H E K C
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRNAAV---CPYCSLRFFSPELKQEHE-SKCEYKKLTCLE 74
Query: 121 CGASFKQRSCLWSHKKWNHEE 141
C +FK +W H+ H +
Sbjct: 75 CMRTFKSSFSIWRHQVEVHNQ 95
Score = 41.4 bits (96), Expect = 8e-05
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 369 ERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVR 428
+ + C LC A +H++L C C +F H + + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC----RNAAVCPYCSLRFFSPELKQEH-ESKCEYK 68
Query: 429 PYKCDICEQHFKFNYDIQMHKRCVHS 454
C C + FK ++ I H+ VH+
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 41.4 bits (96), Expect = 9e-05
Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 99 AASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKN 158
+S S + ++ + + C LC A SH++ C C +F
Sbjct: 1 GSSGSSGASPVENK-EVYQCRLCNAKLSSLLEQGSHERLCRN----AAVCPYCSLRFFSP 55
Query: 159 YSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
EH + + + C C FK ++ + RH+ +VH+
Sbjct: 56 ELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 41.0 bits (95), Expect = 1e-04
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 396 AKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSN 455
+ + ++C LC+ K + SH R + C C F Q H+
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES--KCE 66
Query: 456 IRPYQCTLCSASFKRSSHLKQH 477
+ C C +FK S + +H
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRH 88
Score = 39.9 bits (92), Expect = 3e-04
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Query: 303 KSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLH 362
S + Y C C +L H + C C F + + H
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV---CPYCSLRFFSPELKQEH 61
Query: 363 KLIHSEERGFVCDLCGASFKQRPALWAHKK 392
+ E + C C +FK ++W H+
Sbjct: 62 E-SKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 38.0 bits (87), Expect = 0.001
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 12/93 (12%)
Query: 246 NRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSH 305
N+++ QC LC+ S +H C+ + CP C L F + H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA-----------AVCPYCSLRFFSPELKQEH 61
Query: 306 LKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
++ + TC C + + ++ H VH
Sbjct: 62 -ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 36.0 bits (82), Expect = 0.007
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
++C LC K H + + C C F L+ + + + C
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFF--SPELKQEHESKCEYKKLTC 72
Query: 710 TICSATFKTARALKQH 725
C TFK++ ++ +H
Sbjct: 73 LECMRTFKSSFSIWRH 88
Score = 35.6 bits (81), Expect = 0.009
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 190 LRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKHMTSILLTCDQCHST-------EEAG 242
V + ++ C LC+A + HE+ + + C C +E
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHE 62
Query: 243 CKCNRQLLQCSLCSETFKSKPSLRAHIWK 271
KC + L C C TFKS S+ H +
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 34.1 bits (77), Expect = 0.030
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 138 NHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ E ++C LC K H + + C C F + ++ + +
Sbjct: 9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFF-SPELKQEHESKC 65
Query: 198 SNIIHNCNLCSATFKTARGLKQHEKK 223
C C TFK++ + +H+ +
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 30.6 bits (68), Expect = 0.56
Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 510 CNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCG 569
CN L SH N C C ++F ++H + TC +C
Sbjct: 22 CNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKC---EYKKLTCLECM 76
Query: 570 KQLSYAKTLANHIKGVH 586
+ + ++ H VH
Sbjct: 77 RTFKSSFSIWRHQVEVH 93
Score = 27.9 bits (61), Expect = 4.2
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 10 CSLCSETFKSKPRLRAHIWKCQMEPETILETLGHQFES-QLFTGPMEKCD---IMCDQCG 65
C LC+ S +H C+ + +F S +L KC+ + C +C
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 66 KHFTSSQSLARHIKCVH 82
+ F SS S+ RH VH
Sbjct: 77 RTFKSSFSIWRHQVEVH 93
Score = 27.2 bits (59), Expect = 9.3
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 666 YEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQH 725
+ Y+C +C + H++ + +C CS F + ++H
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---VCPYCSLRFFSPELKQEH 61
Query: 726 GRTHIKSR 733
+
Sbjct: 62 ESKCEYKK 69
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 42.7 bits (101), Expect = 6e-06
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTHI 482
+ I+P+QC C SF RS HL H K H+
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 33.1 bits (76), Expect = 0.012
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 399 EYKFKCILCDRKFHRNSKLNSHMRTH 424
F+C CDR F R+ L H + H
Sbjct: 9 IKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.1 bits (63), Expect = 0.84
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 145 KFECTLCGKKFVKNYSLYEHMKRH 168
F+C C + F ++ L H KRH
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.1 bits (63), Expect = 0.84
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 649 KFECTLCGKKFVKNYSLYEHMKRH 672
F+C C + F ++ L H KRH
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRH 34
Score = 26.9 bits (60), Expect = 2.2
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 701 HSTTRPYLCTICSATFKTARALKQHGRTHI 730
+ +P+ C C +F + L H + H+
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 26.1 bits (58), Expect = 3.7
Identities = 7/37 (18%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 305 HLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKI 341
+ + + + C C + + +L+LH K H+ +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHMLV 37
Score = 25.4 bits (56), Expect = 7.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 164 HMKRHSDVRPYKCDICGHGF 183
+ + ++P++C C F
Sbjct: 2 STRGSTGIKPFQCPDCDRSF 21
Score = 25.4 bits (56), Expect = 7.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 668 HMKRHSDVRPYKCDICGHGF 687
+ + ++P++C C F
Sbjct: 2 STRGSTGIKPFQCPDCDRSF 21
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 42.3 bits (99), Expect = 3e-05
Identities = 16/75 (21%), Positives = 23/75 (30%), Gaps = 7/75 (9%)
Query: 109 IHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYK-------FECTLCGKKFVKNYSL 161
I Q C +F L +H H + EC GK F Y L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 162 YEHMKRHSDVRPYKC 176
H++ H+ +
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 41.9 bits (98), Expect = 5e-05
Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 365 IHSEERGFVCDLCGASFKQRPALWAH-KKLHDAKLEYK------FKCILCDRKFHRNSKL 417
I + C +F L H H E +C + F KL
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 418 NSHMRTHSDVRPYKC 432
+H+R H+ +
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 41.1 bits (96), Expect = 9e-05
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 613 VHSEQKSFVCELCGASFKQRTCLWSHKKWNH-------EELIYKFECTLCGKKFVKNYSL 665
+ Q S + C +F L +H H + Y EC GK F Y L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 666 YEHMKRHSDVRPYKC 680
H++ H+ +
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 40.3 bits (94), Expect = 2e-04
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKH------HW--CDICGKSFFAASELKQHSFIHSE 112
C + F++ L H+ H+ +W C GKSF A +L H +H+
Sbjct: 28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87
Query: 113 QKGFVC 118
+K
Sbjct: 88 EKSGPS 93
Score = 38.4 bits (89), Expect = 7e-04
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 8/75 (10%)
Query: 308 THSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVC--------DKSFVNRAGL 359
+ S C + L H+ H+ + + VC KSF + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 360 RLHKLIHSEERGFVC 374
H +H+ E+
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 36.9 bits (85), Expect = 0.003
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 10/73 (13%)
Query: 399 EYKFKCILCDRKFHRNSKLNSHM-RTHSDVRPYKCDICE--------QHFKFNYDIQMHK 449
+ CDR F +L +H+ H +C + FK Y + H
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82
Query: 450 RCVHSNIRPYQCT 462
R VH+ + +
Sbjct: 83 R-VHTGEKSGPSS 94
Score = 35.7 bits (82), Expect = 0.007
Identities = 15/67 (22%), Positives = 25/67 (37%)
Query: 251 QCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCPVCKLTFTDKRKLKSHLKTHS 310
C TF + L H+ + +CP +F K KL +H++ H+
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 311 IERSYTC 317
E+S
Sbjct: 87 GEKSGPS 93
Score = 35.3 bits (81), Expect = 0.008
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHS--------CENCAKSFFSLAELRQHSP 612
S C + S L H+ H+ + + C KSF + +L H
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 613 VHSEQKSFVC 622
VH+ +KS
Sbjct: 84 VHTGEKSGPS 93
Score = 33.0 bits (75), Expect = 0.064
Identities = 11/66 (16%), Positives = 16/66 (24%), Gaps = 8/66 (12%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY--------LCTICSATFKTARALK 723
C F ++++ H H C +FK L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 724 QHGRTH 729
H R H
Sbjct: 80 NHIRVH 85
Score = 32.2 bits (73), Expect = 0.12
Identities = 11/67 (16%), Positives = 17/67 (25%), Gaps = 8/67 (11%)
Query: 423 THSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQ--------CTLCSASFKRSSHL 474
C++ F +++ H H C SFK L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 475 KQHGKTH 481
H + H
Sbjct: 79 VNHIRVH 85
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 41.6 bits (97), Expect = 3e-05
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 99 AASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKN 158
++ + IH + C CG F +RS L K C C K +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQE 52
Query: 159 YSLYEHMKRHSDVRPY 174
+L + S +
Sbjct: 53 AALNKDEGNESGKKTS 68
Score = 41.2 bits (96), Expect = 5e-05
Identities = 15/74 (20%), Positives = 22/74 (29%), Gaps = 9/74 (12%)
Query: 357 AGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSK 416
+ IH +R C CG F +R L K C C + + +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT---------PMCEKCRKDSCQEAA 54
Query: 417 LNSHMRTHSDVRPY 430
LN S +
Sbjct: 55 LNKDEGNESGKKTS 68
Score = 40.0 bits (93), Expect = 1e-04
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 603 SLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKN 662
S + +H +S C CG F +R+ L K C C K +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQE 52
Query: 663 YSLYEHMKRHSDVRPY 678
+L + S +
Sbjct: 53 AALNKDEGNESGKKTS 68
Score = 39.3 bits (91), Expect = 2e-04
Identities = 17/69 (24%), Positives = 23/69 (33%), Gaps = 8/69 (11%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRL 361
K H +RS C CG S LS + K C+ C K A L
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLS--------RRKTPMCEKCRKDSCQEAALNK 57
Query: 362 HKLIHSEER 370
+ S ++
Sbjct: 58 DEGNESGKK 66
Score = 38.9 bits (90), Expect = 3e-04
Identities = 11/69 (15%), Positives = 18/69 (26%), Gaps = 8/69 (11%)
Query: 413 RNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSS 472
+ + H R KC C F +R S + C C + +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIF--------IRRSTLSRRKTPMCEKCRKDSCQEA 53
Query: 473 HLKQHGKTH 481
L +
Sbjct: 54 ALNKDEGNE 62
Score = 37.3 bits (86), Expect = 0.001
Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 8/71 (11%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALK 723
S + K H R KC CG F ++ S + +C C AL
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIF--------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56
Query: 724 QHGRTHIKSRT 734
+ +T
Sbjct: 57 KDEGNESGKKT 67
Score = 36.9 bits (85), Expect = 0.001
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 10/75 (13%)
Query: 546 SDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLA 605
K K HL RS C +CG TL+ K CE C K A
Sbjct: 4 GSSGKRQKIHLGD--RSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEA 53
Query: 606 ELRQHSPVHSEQKSF 620
L + S +K+
Sbjct: 54 ALNKDEGNESGKKTS 68
Score = 36.2 bits (83), Expect = 0.003
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 61 CDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
C +CG F +L+R K C+ C K + L + S +K
Sbjct: 21 CSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEGNESGKK 66
Score = 34.6 bits (79), Expect = 0.009
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 70 SSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRS 129
SS S + K +HL + C CG F S L + K +C+ C Q +
Sbjct: 2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEA 53
Query: 130 CLWSHKKWNHEELSY 144
L + + +
Sbjct: 54 ALNKDEGNESGKKTS 68
Score = 32.3 bits (73), Expect = 0.061
Identities = 15/66 (22%), Positives = 18/66 (27%), Gaps = 7/66 (10%)
Query: 160 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQ 219
S + K H R KC CG F + R K C C L +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNK 57
Query: 220 HEKKHM 225
E
Sbjct: 58 DEGNES 63
Score = 30.8 bits (69), Expect = 0.21
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 326 GASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRP 385
G+S S + +HL + C C F+ R+ S + +C+ C Q
Sbjct: 1 GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEA 53
Query: 386 ALWAHKKLHDAKLEY 400
AL + K
Sbjct: 54 ALNKDEGNESGKKTS 68
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 39.3 bits (91), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 145 KFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQ 194
K+ C CG + K L +H++ H+DVRPY C C FK ++ +H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 39.3 bits (91), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 649 KFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQ 698
K+ C CG + K L +H++ H+DVRPY C C FK ++ +H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 38.5 bits (89), Expect = 3e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 315 YTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
Y C CG + S L HI++ H ++ + C C+ SF + L H + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 38.2 bits (88), Expect = 4e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 563 YTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQK 618
Y C++CG + L HI+ H ++ + C C SF + L +H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 37.0 bits (85), Expect = 0.001
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 401 KFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKR 450
K+ C C + + S L H+RTH+DVRPY C C FK ++ H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 37.0 bits (85), Expect = 0.001
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEE 141
C+ CG S LK+H H++ + + C C SFK + L H K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 36.6 bits (84), Expect = 0.001
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 60 MCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQK 114
+C++CG L +HI+ H ++ + C C SF L +H + K
Sbjct: 3 ICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 35.5 bits (81), Expect = 0.003
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 430 YKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
Y C+ C K ++ H R H+++RPY CT C+ SFK +L +H K+
Sbjct: 2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 34.3 bits (78), Expect = 0.008
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 678 YKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
Y C+ CG K + +H + H+ RPY CT C+ +FKT L +H ++
Sbjct: 2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 34.3 bits (78), Expect = 0.010
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 346 CDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
C+ C + L+ H H++ R + C C SFK + L H K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 33.5 bits (76), Expect = 0.014
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 591 KHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEE 645
K+ CE C + L++H H++ + + C C SFK + L H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55
Score = 33.2 bits (75), Expect = 0.020
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIK 583
Y CE+C ++ S ++KH +TH R Y C C L H+K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDV--RPYHCTYCNFSFKTKGNLTKHMK 50
Score = 33.2 bits (75), Expect = 0.022
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 372 FVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHS 425
++C+ CG K+ L H + H + C C+ F L HM++ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTD--VRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 32.4 bits (73), Expect = 0.036
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKS 336
C C + LK H++TH+ R Y C +C NL+ H+KS
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51
Score = 29.7 bits (66), Expect = 0.45
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 116 FVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHS 169
++C+ CG K+ S L H + + + Y CT C F +L +HMK +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYH--CTYCNFSFKTKGNLTKHMKSKA 53
Score = 29.3 bits (65), Expect = 0.51
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 620 FVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
++CE CG K+ + L H + + + Y CT C F +L +HMK +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYH--CTYCNFSFKTKGNLTKHMKSKA 53
Score = 28.9 bits (64), Expect = 0.65
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 174 YKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKH 224
Y C+ CG K + +H + ++C C+ +FKT L +H K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 27.8 bits (61), Expect = 2.1
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 520 LHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
L H+ T + Y C C F K ++ KH K+
Sbjct: 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 38.4 bits (90), Expect = 2e-04
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 419 SHMRTHSDVRPYKCD--ICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P+ C C F + ++ H+R HS ++P +
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPS 46
Score = 37.3 bits (87), Expect = 6e-04
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 389 AHKKLHDAKLEYKFKC--ILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
+ E F C C +F R+ +L+ H R+HS V+P
Sbjct: 2 SSGSSGTG--EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.0 bits (76), Expect = 0.017
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 448 HKRCVHSNIRPYQCT--LCSASFKRSSHLKQHGKTH 481
+ +P+ CT C F RS L +H ++H
Sbjct: 3 SGSS-GTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 31.5 bits (72), Expect = 0.076
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 146 FECT--LCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
F CT CG +F ++ L H + HS V+P
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 31.5 bits (72), Expect = 0.076
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 650 FECT--LCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
F CT CG +F ++ L H + HS V+P
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.3 bits (69), Expect = 0.16
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 668 HMKRHSDVRPYKCD--ICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P+ C CG F + ++ RH++ HS +P +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPS 46
Score = 29.2 bits (66), Expect = 0.42
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 93 CGKSFFAASELKQHSFIHSEQKGFVCD 119
CG F + EL +H HS K
Sbjct: 20 CGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 26.1 bits (58), Expect = 4.8
Identities = 10/72 (13%), Positives = 16/72 (22%), Gaps = 27/72 (37%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGLRLHK 363
S + + E+ + C G C F L H+
Sbjct: 2 SSGSSGTGEKPFACTWPG---------------------------CGWRFSRSDELSRHR 34
Query: 364 LIHSEERGFVCD 375
HS +
Sbjct: 35 RSHSGVKPSGPS 46
Score = 26.1 bits (58), Expect = 6.5
Identities = 10/47 (21%), Positives = 13/47 (27%), Gaps = 3/47 (6%)
Query: 579 ANHIKGVHLKIKKHSC--ENCAKSFFSLAELRQHSPVHSEQKSFVCE 623
+ K +C C F EL +H HS K
Sbjct: 1 GSSGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 38.4 bits (89), Expect = 3e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLC 121
K C+ICGK F L +H HS +K +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 37.6 bits (87), Expect = 4e-04
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLC 377
K +C++C K F + L HKL HS E+ +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.5 bits (84), Expect = 0.001
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 422 RTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSA 466
+ + C+IC + F+ Y + HK HS +PY S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPSSG 48
Score = 36.5 bits (84), Expect = 0.001
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 670 KRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSA 714
+ C+ICG F+ Y + RHK HS +PY S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPSSG 48
Score = 34.9 bits (80), Expect = 0.004
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 401 KFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDIC 435
+ C +C + F LN H +HS +PY
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.9 bits (80), Expect = 0.004
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 145 KFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDIC 179
+ C +CGK F Y L H HS +PY
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.9 bits (80), Expect = 0.004
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 649 KFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDIC 683
+ C +CGK F Y L H HS +PY
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.0 bits (75), Expect = 0.022
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELC 625
K+ +CE C K F + L +H HS +K +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.029
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 457 RPYQCTLCSASFKRSSHLKQHGKTH 481
+ C +C F+ HL +H +H
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSH 35
Score = 29.1 bits (65), Expect = 0.52
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 701 HSTTRPYLCTICSATFKTARALKQHGRTH 729
T + C IC F+ L +H +H
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSH 35
Score = 29.1 bits (65), Expect = 0.52
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 166 KRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+ C+ICG F+ Y + RHK
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHK 32
Score = 28.4 bits (63), Expect = 0.92
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHC 320
C +C F D L H +HS E+ Y+
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 26.8 bits (59), Expect = 2.8
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVC 349
+ + C CGK +L+ H S H K +S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPS 46
Score = 26.1 bits (57), Expect = 5.3
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 110 HSEQKGFVCDLCGASFKQRSCLWSHK 135
+K C++CG F+ L HK
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHK 32
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 37.9 bits (89), Expect = 3e-04
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S RPY C C +F R SHL +H K H
Sbjct: 3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S RPY C+ C ++F + + H + H + +
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPS 44
Score = 35.2 bits (82), Expect = 0.003
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F R+S L H++ H +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.4 bits (80), Expect = 0.006
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F ++ L EH+KRH +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.4 bits (80), Expect = 0.006
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F ++ L EH+KRH +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S RPY C+ CG F + ++ H H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRHFREKSSGPS 44
Score = 30.9 bits (71), Expect = 0.11
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S ER + C+ CG +F + L H K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 29.4 bits (67), Expect = 0.30
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSC 346
S + S ER Y C+ CGK S+L H+K H + K
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGP 43
Score = 29.0 bits (66), Expect = 0.50
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S L +H H +K
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 27.9 bits (63), Expect = 1.2
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + + C+ C K+F + L H H E+
Sbjct: 4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S ++ + C+ CG +F + S L H K
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLK 33
Score = 27.5 bits (62), Expect = 1.8
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S RPY C C F L +H + H
Sbjct: 4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 25.6 bits (57), Expect = 7.9
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
S RPY C+ CG F + ++ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHL 32
Score = 25.6 bits (57), Expect = 8.4
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTC 317
C C F L HLK H E+S
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 37.5 bits (88), Expect = 4e-04
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + V PYKC CE+ F + +H+R +H+ +P +
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGPS 44
Score = 33.7 bits (78), Expect = 0.010
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C++ F +L H R H+ +P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.4 bits (72), Expect = 0.068
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C+ C K F L H + H+ +P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.4 bits (72), Expect = 0.068
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C+ C K F L H + H+ +P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ V PYKC C F +L H Q +H+ +P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMHTREKPSGPS 44
Score = 30.6 bits (70), Expect = 0.13
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + Y C C K G L +H
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31
Score = 30.2 bits (69), Expect = 0.19
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ + PY+C+ C SF L H + H
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 28.7 bits (65), Expect = 0.55
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 336 SVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + + C C+KSF + L +H+ +H+ E+
Sbjct: 5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ C C KSF L H +H+ +K
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 26.0 bits (58), Expect = 5.4
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + C C SF + L H+++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 25.6 bits (57), Expect = 8.3
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ V PYKC C F +L H Q +H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 42.9 bits (100), Expect = 4e-04
Identities = 8/64 (12%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Query: 364 LIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRT 423
+ + A + PA + + ++C +C L++H+ +
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASS--GHGYQCHVCSAVLFSPLDLDAHVAS 202
Query: 424 HSDV 427
H
Sbjct: 203 HGLH 206
Score = 39.8 bits (92), Expect = 0.004
Identities = 9/53 (16%), Positives = 12/53 (22%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ S G+ C +C A L AH H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.5 bits (91), Expect = 0.005
Identities = 9/47 (19%), Positives = 11/47 (23%)
Query: 287 SQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
+ T S Y CH C L +L H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH 199
Score = 39.1 bits (90), Expect = 0.006
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 699 DVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S+ Y C +CSA + L H +H
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.8 bits (84), Expect = 0.034
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S+ YQC +CSA L H +H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.4 bits (83), Expect = 0.042
Identities = 8/56 (14%), Positives = 15/56 (26%)
Query: 500 CQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTH 555
+ + ++ K T + Y C C D+ H +H
Sbjct: 148 KPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.049
Identities = 6/35 (17%), Positives = 8/35 (22%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEE 369
+ C VC + L H H
Sbjct: 172 PPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 35.2 bits (80), Expect = 0.090
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
P S + C +C A L +H
Sbjct: 171 LPPTASSGHGYQCHVCSAVLFSPLDLDAHV 200
Score = 34.8 bits (79), Expect = 0.11
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 143 SYKFECTLCGKKFVKNYSLYEHMKRHSDV 171
+ ++C +C L H+ H
Sbjct: 178 GHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 34.4 bits (78), Expect = 0.16
Identities = 5/28 (17%), Positives = 10/28 (35%)
Query: 648 YKFECTLCGKKFVKNYSLYEHMKRHSDV 675
+ ++C +C L H+ H
Sbjct: 179 HGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 33.3 bits (75), Expect = 0.32
Identities = 7/54 (12%), Positives = 13/54 (24%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELS 143
+ S G+ C +C A L +H + +
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 33.3 bits (75), Expect = 0.37
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSE 112
+ C +C F+ +L H H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 32.9 bits (74), Expect = 0.44
Identities = 10/48 (20%), Positives = 11/48 (22%), Gaps = 2/48 (4%)
Query: 534 SCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANH 581
E S T + G Y C C L L H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTA--SSGHGYQCHVCSAVLFSPLDLDAH 199
Score = 32.9 bits (74), Expect = 0.47
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 585 VHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKS 619
+ C C+ FS +L H H +
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 31.7 bits (71), Expect = 1.1
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERS 314
QC VC L +H+ +H + +
Sbjct: 182 QCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 31.7 bits (71), Expect = 1.2
Identities = 5/17 (29%), Positives = 5/17 (29%)
Query: 61 CDQCGKHFTSSQSLARH 77
C C S L H
Sbjct: 183 CHVCSAVLFSPLDLDAH 199
Score = 31.4 bits (70), Expect = 1.5
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 202 HNCNLCSATFKTARGLKQHEKKH 224
+ C++CSA + L H H
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASH 203
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 39.9 bits (92), Expect = 5e-04
Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 6/111 (5%)
Query: 367 SEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSD 426
S +G + K+ L +K + K ++ + + S +
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIV---KTLIHNPQLLDESSYLYRLLASKA 71
Query: 427 VRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKRSSHLKQH 477
+ + C +C F + ++ H R C +C F + H
Sbjct: 72 ISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDH 119
Score = 39.1 bits (90), Expect = 8e-04
Identities = 15/115 (13%), Positives = 34/115 (29%), Gaps = 6/115 (5%)
Query: 615 SEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHSD 674
S K + K+ L +K ++ + + S +
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHN---PQLLDESSYLYRLLASKA 71
Query: 675 VRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ + C +C F + + +H + T +C +C F + + H
Sbjct: 72 ISQFVCPLCLMPFSSSVSLKQH---IRYTEHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 36.5 bits (83), Expect = 0.008
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
CP+C + F+ LK H++ E + C C K+ + H+ H
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 34.9 bits (79), Expect = 0.026
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
+F C LC F + SL +H++ C +C F L H H+
Sbjct: 73 SQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHN 125
Score = 34.5 bits (78), Expect = 0.034
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 392 KLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRC 451
+L +K +F C LC F + L H+R C +C++ F H
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCK 122
Query: 452 VHS 454
H+
Sbjct: 123 KHN 125
Score = 33.0 bits (74), Expect = 0.12
Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 8/117 (6%)
Query: 473 HLKQHGKTHIKPEHDLKTKMNLFTCHQ---CQSTEEAGCKCNMMLMKCQLLHSHLNTQDN 529
+L H I + + + T Q ++ + +L + L+ L ++
Sbjct: 13 YLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAI 72
Query: 530 KINYSCEQCKVQFSCKSDMRKHAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVH 586
+ C C + FS +++H + + C C K+ + + +H+ H
Sbjct: 73 SQ-FVCPLCLMPFSSSVSLKQHIRYT----EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 33.0 bits (74), Expect = 0.13
Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 589 IKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNH 643
I + C C F S L+QH + + + VC +C F H H
Sbjct: 72 ISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 32.2 bits (72), Expect = 0.20
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 5/114 (4%)
Query: 111 SEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSD 170
S KG + K+ L +K + + + S +
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHN---PQLLDESSYLYRLLASKA 71
Query: 171 VRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHNCNLCSATFKTARGLKQHEKKH 224
+ + C +C F + + +H + + C +C F + H K
Sbjct: 72 ISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHVCKK 123
Score = 31.1 bits (69), Expect = 0.51
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNH 139
C +C F ++ LKQH I + VC +C F H H
Sbjct: 77 CPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 30.7 bits (68), Expect = 0.66
Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 2/85 (2%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ ++ + + L KR + + R ++C
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA--SKAISQFVC 77
Query: 710 TICSATFKTARALKQHGRTHIKSRT 734
+C F ++ +LKQH R ++
Sbjct: 78 PLCLMPFSSSVSLKQHIRYTEHTKV 102
Score = 30.3 bits (67), Expect = 0.83
Identities = 20/108 (18%), Positives = 31/108 (28%), Gaps = 5/108 (4%)
Query: 286 LSQCPVCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGA---SNLSLHIKSVHLKIK 342
LS + T + + H T +R + L+ I
Sbjct: 14 LSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAIS 73
Query: 343 DHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAH 390
C +C F + L+ H I E VC +C F + H
Sbjct: 74 QFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDH 119
Score = 30.3 bits (67), Expect = 0.97
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 60 MCDQCGKHFTSSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQH 106
+C C F+SS SL +HI+ C +C K F + H
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDH 119
Score = 29.1 bits (64), Expect = 2.3
Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Query: 92 ICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLC 151
I S FVC LC F L H ++ C +C
Sbjct: 51 IHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT----KVCPVC 106
Query: 152 GKKFVKNYSLYEHMKRH 168
K+F S +H+ +
Sbjct: 107 KKEFTSTDSALDHVCKK 123
Score = 27.6 bits (60), Expect = 7.5
Identities = 13/83 (15%), Positives = 21/83 (25%), Gaps = 2/83 (2%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
+ + R +L + Q + + I + C
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVC 77
Query: 462 TLCSASFKRSSHLKQHGKTHIKP 484
LC F S LKQH +
Sbjct: 78 PLCLMPFSSSVSLKQHIRYTEHT 100
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 37.1 bits (87), Expect = 6e-04
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PYKC+ C + + ++ MH+R VH + +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGPS 44
Score = 34.4 bits (80), Expect = 0.006
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + ++R L+ H R H +
Sbjct: 2 SSGSSGSV--EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.0 bits (79), Expect = 0.009
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C C + R +L H + H
Sbjct: 3 SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 33.2 bits (77), Expect = 0.014
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PYKC+ CG G+ ++ H Q VH + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVHMGEKTSGPS 44
Score = 31.7 bits (73), Expect = 0.054
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK + + +L H + H +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 31.7 bits (73), Expect = 0.054
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK + + +L H + H +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 30.9 bits (71), Expect = 0.11
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C+ CG + +R L H+++H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 30.9 bits (71), Expect = 0.11
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S+E+ Y C CGK NL +H
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31
Score = 29.4 bits (67), Expect = 0.36
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C+ CG + +R L H++
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33
Score = 28.2 bits (64), Expect = 1.0
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
S +PYKC+ CG G+ ++ H Q VH
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35
Score = 27.8 bits (63), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K + CE CG + +R L H++
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33
Score = 27.5 bits (62), Expect = 1.8
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGK + L H +H +K
Sbjct: 6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 27.1 bits (61), Expect = 2.4
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C+ C K + R L +H+ +H E+
Sbjct: 4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 25.9 bits (58), Expect = 7.1
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C + L H R H
Sbjct: 4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 37.2 bits (87), Expect = 7e-04
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C C + F N + H R H+ +P +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 34.5 bits (80), Expect = 0.006
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C CG F N ++RH + H+ +P +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 32.2 bits (74), Expect = 0.035
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
S + + ++ Y C CGK ++L H + H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 31.0 bits (71), Expect = 0.10
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQH 477
+ +PY+C C +F +++ L +H
Sbjct: 3 SGS-SGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 30.2 bits (69), Expect = 0.20
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 146 FECTLCGKKFVKNYSLYEHMKR-HSDVRPYKC 176
+EC CGK F++N SL H + H+ +P
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 30.2 bits (69), Expect = 0.20
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 650 FECTLCGKKFVKNYSLYEHMKR-HSDVRPYKC 680
+EC CGK F++N SL H + H+ +P
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 30.2 bits (69), Expect = 0.21
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNH 139
+ +K + C CG +F Q + L H ++ H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 28.7 bits (65), Expect = 0.60
Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMR-THSDVRPYKC 432
+ + ++CI C + F +N+ L H R H+ +P
Sbjct: 2 SSGSSGTG--KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 27.9 bits (63), Expect = 1.0
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ +PY+C CG F N ++RH + H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 27.9 bits (63), Expect = 1.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNH 643
+ +K + C CG +F Q T L H ++ H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 27.5 bits (62), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 61 CDQCGKHFTSSQSLARHIKCVH 82
C +CGK F + SL RH + H
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYH 36
Score = 26.0 bits (58), Expect = 6.5
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAH 390
+ ++ + C CG +F Q +L H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.7 bits (86), Expect = 8e-04
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + YKCD+C + F + +Q H+R VH+ +P +
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.005
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ Y+C +C F +SSHL+ H + H
Sbjct: 3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 33.3 bits (77), Expect = 0.014
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC +C ++F ++S L +H R H+ +P
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ YKCD+CG F + + H Q VH+ +P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.12
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + CD+CG F Q L H+++H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 30.2 bits (69), Expect = 0.16
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C +CGK+F ++ L H + H+ +P
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.16
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C +CGK+F ++ L H + H+ +P
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.78
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+K + CD+CG F Q S L +H+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ 32
Score = 28.3 bits (64), Expect = 0.83
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
CD+CGK F +S L+ H +H+ +K
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + E+ Y C CGK+ +S+L H
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31
Score = 27.9 bits (63), Expect = 1.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + K + CDVC K F + L+ H+ +H+ E+
Sbjct: 4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.8
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ YKCD+CG F + + H Q VH
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35
Score = 26.0 bits (58), Expect = 6.5
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
+K + C++CG F Q + L +H+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ 32
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +KC C+ F +++H+ VH +P +
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.003
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC CD F + S L H H +P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C C F + SL H H +P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C C F + SL H H +P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.13
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ ++C C F ++S L+ H H
Sbjct: 6 SGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 30.2 bits (69), Expect = 0.18
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + E+++ C C AS+L LH
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLH 31
Score = 29.8 bits (68), Expect = 0.28
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +KC C F + H Q+VH +P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVHVGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.43
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + K C CD F + LRLH+ +H E+
Sbjct: 4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.5
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + C C F Q +L H+ +H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 26.7 bits (60), Expect = 3.3
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C C F AS L+ H +H +K
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.9
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+K + C C F Q S L H+
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33
Score = 25.6 bits (57), Expect = 7.1
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+K++ C C F Q + L H+
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F C C++ F S L H +TH++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 33.3 bits (77), Expect = 0.013
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F C+ C K F L H + H++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 33.3 bits (77), Expect = 0.013
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F C+ C K F L H + H++ +P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 32.5 bits (75), Expect = 0.025
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +P+ C+ C +F S+L H +TH
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 30.6 bits (70), Expect = 0.12
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K C C+K+F +++ L +H+ H+EE+
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 30.2 bits (69), Expect = 0.17
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +P+ C C F +L H Q H+ +P +
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVH-QQTHAEEKPSGPS 42
Score = 30.2 bits (69), Expect = 0.18
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 422 RTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S +P+ C CE+ F + +H++ H+ +P +
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPS 42
Score = 28.3 bits (64), Expect = 0.90
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C C K+F + S L H H+E+K
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 25.6 bits (57), Expect = 7.6
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLH 333
S E+ + C C K S L +H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVH 29
Score = 25.6 bits (57), Expect = 8.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 700 VHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +P+ C+ C F + L H +TH
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+PY+C C A F + +HL+ H H
Sbjct: 5 SSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 33.3 bits (77), Expect = 0.014
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPY 430
+KC C +F + + L +H+ H+ P
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 32.1 bits (74), Expect = 0.032
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 420 HMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
+ +PYKC+ C F ++ H +H+ P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTGSGPS 40
Score = 31.0 bits (71), Expect = 0.10
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 305 HLKTHSIERSYTCHHCGKQLCGASNLSLH 333
+ E+ Y C CG + ++L H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH 30
Score = 29.4 bits (67), Expect = 0.29
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
+PYKC+ CG F + H +H+ + P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIHTGSGPS 40
Score = 29.0 bits (66), Expect = 0.41
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + C+ CGA F Q L AH +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 28.3 bits (64), Expect = 0.81
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
K + C+ C FV A LR H LIH+
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 28.3 bits (64), Expect = 0.89
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+PY C C A F L+ H H
Sbjct: 3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 27.9 bits (63), Expect = 0.94
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 174
++C CG +FV+ L H+ H+ P
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 27.9 bits (63), Expect = 0.94
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
++C CG +FV+ L H+ H+ P
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 27.5 bits (62), Expect = 1.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
S +K + C+ CGA F Q + L +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
S +K + CE CGA F Q L +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31
Score = 27.1 bits (61), Expect = 2.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQK 114
C+ CG F + L+ H IH+
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSG 38
Score = 26.7 bits (60), Expect = 2.5
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+PYKC+ CG F + H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31
Score = 26.3 bits (59), Expect = 3.7
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y CE C +F + +R H H
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIH 34
Score = 25.6 bits (57), Expect = 7.4
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 61 CDQCGKHFTSSQSLARH 77
C+ CG F L H
Sbjct: 14 CETCGARFVQVAHLRAH 30
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + + +++ MH++ VH+ RP +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGPS 44
Score = 33.3 bits (77), Expect = 0.013
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C + ++ L+ H + H+ RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 32.9 bits (76), Expect = 0.023
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C + +L H K H
Sbjct: 3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 32.5 bits (75), Expect = 0.028
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG G+ +++ H Q VH+ RP +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVHTGERPSGPS 44
Score = 30.6 bits (70), Expect = 0.13
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK + ++L H K H+ RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 30.6 bits (70), Expect = 0.13
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK + ++L H K H+ RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 29.0 bits (66), Expect = 0.41
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK NL +H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31
Score = 28.3 bits (64), Expect = 0.76
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG + + L H+K+H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 26.3 bits (59), Expect = 4.5
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ +PYKC+ CG G+ +++ H Q VH
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35
Score = 26.0 bits (58), Expect = 5.2
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK + + L H +H+ ++
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 26.0 bits (58), Expect = 6.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C K + ++ L +H+ +H+ ER
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 26.0 bits (58), Expect = 6.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG + + L H+K
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33
Score = 25.6 bits (57), Expect = 8.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C++CGK + S +L H
Sbjct: 15 CEKCGKGYNSKFNLDMH 31
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F D+ H VH+ +P +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.006
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F L +H H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.032
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG GF D+ H VH+ +P +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.037
Identities = 8/34 (23%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F L H H
Sbjct: 3 SGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 31.0 bits (71), Expect = 0.11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F+ LY H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.11
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F+ LY H H+ +P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.44
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK +L H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTH 31
Score = 28.7 bits (65), Expect = 0.54
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F R L+ H +H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 27.1 bits (61), Expect = 2.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F +L H +H+ +K
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+ +PYKC+ CG GF D+ H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32
Score = 26.7 bits (60), Expect = 3.2
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+ +K + C+ CG F R L++H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32
Score = 26.3 bits (59), Expect = 4.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C K F+ R L H ++H+ E+
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y CE+C F C+ D+ H H
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVH 35
Score = 25.2 bits (56), Expect = 9.8
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
+ +K + CE CG F R L++H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH 32
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P+KCDIC + F + H VH+ +P +
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPS 44
Score = 35.5 bits (83), Expect = 0.002
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
+ E FKC +C + F S+LN H H+ +P
Sbjct: 2 SSGSSGTG--EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.005
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C +C SF S L +H H
Sbjct: 3 SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 32.1 bits (74), Expect = 0.034
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P+KCDICG F + RH VH+ +P +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVHTAEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
F+C +CGK F L H H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
F+C +CGK F L H H+ +P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.082
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F CD+CG SF R L H +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 30.5 bits (70), Expect = 0.13
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCD 119
CDICGKSF S L +HS +H+ +K
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.19
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK CG S L+ H
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRH 31
Score = 29.0 bits (66), Expect = 0.54
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F CD+CG SF RS L H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33
Score = 28.2 bits (64), Expect = 1.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCD 375
S K CD+C KSF R+ L H ++H+ E+
Sbjct: 4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+ +P+KCDICG F + RH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHS 32
Score = 26.3 bits (59), Expect = 4.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K F C++CG SF R+ L H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33
Score = 25.9 bits (58), Expect = 5.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 61 CDQCGKHFTSSQSLARH 77
CD CGK F L RH
Sbjct: 15 CDICGKSFCGRSRLNRH 31
Score = 25.9 bits (58), Expect = 6.4
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +P+ C IC +F L +H H
Sbjct: 4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC C + F + +++H++ H+ R +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGPS 44
Score = 34.4 bits (80), Expect = 0.006
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F S+L H + H+ R
Sbjct: 2 SSGSSGTG--EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.046
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C+ C SF S L+ H K H
Sbjct: 3 SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 31.4 bits (72), Expect = 0.062
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C+ CGK F L H K H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.4 bits (72), Expect = 0.062
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C+ CGK F L H K H+ R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.4 bits (72), Expect = 0.076
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC CG F + H Q H+ R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCHTGERHSGPS 44
Score = 29.8 bits (68), Expect = 0.25
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L +H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31
Score = 28.3 bits (64), Expect = 1.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C KSF ++ LR+H+ H+ ER
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG SF + L H+K H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 27.1 bits (61), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF S L+ H H+ ++
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 25.6 bits (57), Expect = 8.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C C F+ KS +R H K H
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCH 35
Score = 25.6 bits (57), Expect = 9.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG SF +S L H+K
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
Score = 25.2 bits (56), Expect = 9.7
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C+ C +F L+ H + H
Sbjct: 4 GSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 36.0 bits (84), Expect = 0.002
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+S+TC CGK C S L +H
Sbjct: 2 SSGSSGSGEKSHTCDECGKNFCYISALRIH 31
Score = 31.8 bits (73), Expect = 0.044
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S + + CD C ++F + +++H+R VH + +
Sbjct: 2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMGEKCSGPS 44
Score = 31.0 bits (71), Expect = 0.080
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ CD CG +F AL H+++H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 31.0 bits (71), Expect = 0.085
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S + + C C +F S L+ H + H
Sbjct: 6 SGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 30.6 bits (70), Expect = 0.11
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCD 119
K H CD CGK+F S L+ H +H +K
Sbjct: 6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 30.3 bits (69), Expect = 0.20
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCD 375
S K H+CD C K+F + LR+H+ +H E+
Sbjct: 4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 28.7 bits (65), Expect = 0.54
Identities = 9/44 (20%), Positives = 11/44 (25%), Gaps = 2/44 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
E C C + F S L H R H +
Sbjct: 3 SGSSGSG--EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 28.7 bits (65), Expect = 0.58
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
S +K CD CG +F S L H+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ 32
Score = 28.3 bits (64), Expect = 0.82
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S + + CD CG F + H Q VH + +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVHMGEKCSGPS 44
Score = 28.3 bits (64), Expect = 0.96
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S + + C C F AL+ H R H
Sbjct: 4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 27.6 bits (62), Expect = 1.5
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHK 639
S +KS C+ CG +F + L H+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQ 32
Score = 27.2 bits (61), Expect = 2.3
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 585 VHLKIKKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCE 623
K H+C+ C K+F ++ LR H VH +K
Sbjct: 6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 26.8 bits (60), Expect = 2.6
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
S + + CD CG F + H Q VH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVHM 36
Score = 25.6 bits (57), Expect = 7.3
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
C CGK F +L H + H +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 25.6 bits (57), Expect = 7.3
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
C CGK F +L H + H +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKCD+C + F++ + +H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.012
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC +C + F S L H R H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.025
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C +C SF+ S L H + H
Sbjct: 3 SGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 31.3 bits (72), Expect = 0.061
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C +C K F SL H + H+ +P
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.061
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C +C K F SL H + H+ +P
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.11
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKCD+C F+ + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.25
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + CD+C SF+ +L H+++H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 29.4 bits (67), Expect = 0.36
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + CD+C SF+ S L H++
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
Score = 28.6 bits (65), Expect = 0.70
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C C K S+L++H
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31
Score = 28.2 bits (64), Expect = 0.87
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
CD+C KSF S L H IH+ +K
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + CDVC KSF + L +H+ IH+ E+
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.9
Identities = 7/32 (21%), Positives = 16/32 (50%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C++C SF+ + L H++
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
Score = 25.9 bits (58), Expect = 6.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 61 CDQCGKHFTSSQSLARH 77
CD C K F SL H
Sbjct: 15 CDVCHKSFRYGSSLTVH 31
Score = 25.6 bits (57), Expect = 8.5
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+ +PYKCD+C F+ + H+
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ 32
Score = 25.6 bits (57), Expect = 8.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C +C +F+ +L H R H
Sbjct: 4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + +PY+C C + F +Y + H H+ +P +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWI-THTREKPSGPS 44
Score = 34.4 bits (80), Expect = 0.005
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+PYQC+ C SF S L QH TH
Sbjct: 6 SGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 33.7 bits (78), Expect = 0.009
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + +L H TH+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.3 bits (77), Expect = 0.015
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C+ CGK F +Y L +H H+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.3 bits (77), Expect = 0.015
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C+ CGK F +Y L +H H+ +P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+PY+C CG F +Y + +H H+ +P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITHTREKPSGPS 44
Score = 29.8 bits (68), Expect = 0.24
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + E+ Y C CGK G+ L+ H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQH 31
Score = 29.4 bits (67), Expect = 0.34
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGKSF + L QH H+ +K
Sbjct: 6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 27.5 bits (62), Expect = 1.7
Identities = 9/33 (27%), Positives = 11/33 (33%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + C CG SF L H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 27.1 bits (61), Expect = 1.9
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+PY C+ C +F + L QH TH
Sbjct: 4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 27.1 bits (61), Expect = 2.6
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C C KSF L H + H+ E+
Sbjct: 4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 26.4 bits (59), Expect = 4.6
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+PY+C CG F +Y + +H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35
Score = 26.4 bits (59), Expect = 4.7
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+K + C CG SF L H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33
Score = 26.0 bits (58), Expect = 6.1
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+K + C CG SF L H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 35.4 bits (82), Expect = 0.003
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY C C +F ++ L QH K H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 28.1 bits (63), Expect = 0.85
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C C + F N L +H K H+
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.1 bits (63), Expect = 0.85
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C C + F N L +H K H+
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 27.7 bits (62), Expect = 1.3
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C F N++L H + H+
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 27.7 bits (62), Expect = 1.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
YSC +CK FS + + +H K H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMH 33
Score = 27.3 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 701 HSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C TF L QH + H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 27.3 bits (61), Expect = 2.1
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C C ++F + L QH +H+ + G
Sbjct: 13 CAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 26.9 bits (60), Expect = 2.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C C +F L H+K+H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 26.9 bits (60), Expect = 2.9
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLHIK 335
S E+ Y+C C + + L H K
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQK 31
Score = 26.5 bits (59), Expect = 3.7
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K +SC C ++F + L H+ +H+ + G
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 26.5 bits (59), Expect = 3.9
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
S +PY C C F N +++H Q +H+
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMHTVKSGPSS 41
Score = 26.1 bits (58), Expect = 5.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTC 317
C CK TF+D +L H K H+++ +
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 25.7 bits (57), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 168 HSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
S +PY C C F N +++H Q +H+
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMHT 34
Score = 25.7 bits (57), Expect = 6.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 107 SFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S S +K + C C +F + L H+K
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQK 31
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
FKC+ C + F R S LN H + H+ +P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.007
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P+KC C + F + +H + +H+ +P +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.023
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C C F R S L H K H
Sbjct: 3 SGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 31.7 bits (73), Expect = 0.043
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK F + +L H K H+ +P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.043
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK F + +L H K H+ +P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.34
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P+KC CG GF + H +H+ +P +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.59
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F C CG F +R AL H KLH
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 28.6 bits (65), Expect = 0.68
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK S L++H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31
Score = 27.5 bits (62), Expect = 1.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F C CG F +RS L H K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33
Score = 26.7 bits (60), Expect = 3.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K C C K F R+ L +H +H+ E+
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.2
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK F S L H +H+ +K
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 9.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K F C CG F +R+ L H K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C+ C +F R +HL +H + H
Sbjct: 3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 34.4 bits (80), Expect = 0.006
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E +KC C + FHR++ LN H R H+ RP
Sbjct: 3 SGSSGSG--EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 32.9 bits (76), Expect = 0.020
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PYKC C + F + + H+R +H+ RP +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGPS 44
Score = 31.3 bits (72), Expect = 0.070
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C+ CGK F ++ L EH + H+ RP
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 31.3 bits (72), Expect = 0.070
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C+ CGK F ++ L EH + H+ RP
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 29.8 bits (68), Expect = 0.23
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PYKC CG F + + H + +H+ RP +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIHTGYRPSGPS 44
Score = 29.4 bits (67), Expect = 0.30
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C CG +F + L H+++H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 28.6 bits (65), Expect = 0.62
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C CG +F + + L H++
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33
Score = 27.5 bits (62), Expect = 1.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ Y C CGK ++L+ H
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEH 31
Score = 27.5 bits (62), Expect = 1.7
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F + L +H IH+ +
Sbjct: 1 GSS-GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 27.1 bits (61), Expect = 2.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K + C CG +F + T L H++
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
FKC C + F+ NS+ SH R+HS +P
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.010
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +P+KC+ C + F N H+R HS +P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.018
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +P++C C F +S H ++H
Sbjct: 3 SGS-SGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 32.5 bits (75), Expect = 0.028
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICG 180
F+C CGK F N Y H + HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 32.5 bits (75), Expect = 0.028
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICG 684
F+C CGK F N Y H + HS +P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 31.8 bits (73), Expect = 0.053
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +P+KC+ CG GF N H Q HS +P +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.14
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ + C CGK S H
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 28.3 bits (64), Expect = 0.89
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ F C+ CG F ++H++ H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 27.9 bits (63), Expect = 1.2
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCG 122
C+ CGK F+ S+ H HS +K G
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 27.9 bits (63), Expect = 1.3
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
S +K F C+ CG F S +SH
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 26.0 bits (58), Expect = 5.9
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +P+ C C F T H R+H
Sbjct: 4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 26.0 bits (58), Expect = 6.6
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCDLCG 378
K C+ C K F + H+ HS E+ G
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 25.6 bits (57), Expect = 6.9
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSH 638
S +K F CE CG F + +SH
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 25.6 bits (57), Expect = 7.5
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
S +P+KC+ CG GF N H Q HS
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSHS 36
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C +C +F+ SSHL QH H
Sbjct: 3 SGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 32.5 bits (75), Expect = 0.026
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E +KC +C + F +S L H HS RP
Sbjct: 3 SGSSGTG--EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 31.7 bits (73), Expect = 0.046
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC +C + F+ + + H VHS RP +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGPS 44
Score = 30.9 bits (71), Expect = 0.090
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC +CG F+++ +++H VHS RP +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVHSGERPSGPS 44
Score = 30.6 bits (70), Expect = 0.12
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C +CGK F + L +H HS RP
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 30.6 bits (70), Expect = 0.12
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C +CGK F + L +H HS RP
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 29.0 bits (66), Expect = 0.42
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C +CG +F+ L H +H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 29.0 bits (66), Expect = 0.54
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C +CG +F+ S L H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33
Score = 28.6 bits (65), Expect = 0.56
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C +CGK+F +S L QH +HS ++
Sbjct: 1 GSSGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 27.1 bits (61), Expect = 2.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK +S+L H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31
Score = 26.7 bits (60), Expect = 2.8
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C++CG +F+ + L H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33
Score = 25.6 bits (57), Expect = 7.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C VC K+F + L H +HS ER
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 457 RPYQCTLCSASFKRSSHLKQHGKTH 481
+PY C +C F+ LK H + H
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 33.2 bits (77), Expect = 0.015
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPY 430
+ C +C +F L SH+R H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 32.9 bits (76), Expect = 0.021
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHI 334
+ E+ Y C CG + L H+
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31
Score = 32.5 bits (75), Expect = 0.022
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
+ +PY C+IC F+ ++ H R +H+ P
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPS 40
Score = 30.5 bits (70), Expect = 0.13
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+PY C IC F+ + LK H R H
Sbjct: 3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 29.8 bits (68), Expect = 0.20
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 174
+ C +CG +F +L H++ H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 29.8 bits (68), Expect = 0.20
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
+ C +CG +F +L H++ H+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 29.0 bits (66), Expect = 0.37
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y CE C +F ++ H + H
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIH 34
Score = 29.0 bits (66), Expect = 0.39
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + C++CG F+ L +H ++H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 29.0 bits (66), Expect = 0.40
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSH 638
S +K + CE+CG F+ L SH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 28.6 bits (65), Expect = 0.67
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 90 CDICGKSFFAASELKQHSFIH 110
C+ICG F LK H IH
Sbjct: 14 CEICGTRFRHLQTLKSHLRIH 34
Score = 28.2 bits (64), Expect = 0.85
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
S +K + C++CG F+ L SH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 27.8 bits (63), Expect = 0.96
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
+PY C+ICG F+ + H + +H+ + P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTGSGPS 40
Score = 27.5 bits (62), Expect = 1.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 563 YTCDQCGKQLSYAKTLANHI 582
Y C+ CG + + +TL +H+
Sbjct: 12 YPCEICGTRFRHLQTLKSHL 31
Score = 27.1 bits (61), Expect = 1.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 61 CDQCGKHFTSSQSLARHI 78
C+ CG F Q+L H+
Sbjct: 14 CEICGTRFRHLQTLKSHL 31
Score = 27.1 bits (61), Expect = 2.2
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
K + C++C F + L+ H IH+
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 26.7 bits (60), Expect = 2.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYT 316
C +C F + LKSHL+ H+ +
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 26.3 bits (59), Expect = 4.1
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRH 192
+PY C+ICG F+ + H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 34.9 bits (81), Expect = 0.003
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
++ + Y C C +F R HL +H K H
Sbjct: 3 SGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 29.9 bits (68), Expect = 0.20
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+D + Y C+ CG F + + RH Q +H+
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIHTRKSGPSS 43
Score = 29.5 bits (67), Expect = 0.27
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + +SY C+ CGK +L+ H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
Score = 29.5 bits (67), Expect = 0.28
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 163 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
+D + Y C+ CG F + + RH Q +H+
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIHT 36
Score = 27.9 bits (63), Expect = 1.0
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
++ + + C+ CG +F + L H+K+H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 27.2 bits (61), Expect = 1.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
++ K + C+ CG +F + L H+K
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 27.2 bits (61), Expect = 2.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
++ KS+ C CG +F + L H+K
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 26.4 bits (59), Expect = 3.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGK+F L +H IH+ + G
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 26.4 bits (59), Expect = 4.4
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F + + L H K H+
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 26.4 bits (59), Expect = 4.4
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F + + L H K H+
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 25.6 bits (57), Expect = 6.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K ++C+ C K+F L H+ IH+ + G
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 25.6 bits (57), Expect = 6.8
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F R L H + H+
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +P+KC+ C + F N + H+R VH+ +P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.006
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
FKC C ++F +NS+L+SH R H+ +P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.011
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +P++C C F ++S L H + H
Sbjct: 3 SGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 31.7 bits (73), Expect = 0.055
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK+F +N L+ H + H+ +P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.055
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK+F +N L+ H + H+ +P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.065
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +P+KC+ CG F N + H Q VH+ +P +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.28
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ F C+ CG F Q L +H+++H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 28.6 bits (65), Expect = 0.68
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ + C CGK+ S L H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSH 31
Score = 28.3 bits (64), Expect = 0.87
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K F C+ CG F Q S L SH++
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33
Score = 27.9 bits (63), Expect = 1.1
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K C+ CGK F S+L H +H+ +K
Sbjct: 1 GSSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K F CE CG F Q + L SH++
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33
Score = 25.9 bits (58), Expect = 5.4
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
S +P+KC+ CG F N + H Q VH
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35
Score = 25.6 bits (57), Expect = 7.0
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K C+ C K F + L H+ +H+ E+
Sbjct: 4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PYKC C + +K D+ H+R VH+ + +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPS 44
Score = 34.8 bits (81), Expect = 0.005
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
+KC+ C + + R L+ H R H+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 33.7 bits (78), Expect = 0.011
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C C +KR L H + H
Sbjct: 3 SGS-SGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 31.7 bits (73), Expect = 0.046
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PYKC CG G+K D+ H Q VH+ + +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVHTGEKLSGPS 44
Score = 31.7 bits (73), Expect = 0.058
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
++C CGK + + L H + H+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 31.7 bits (73), Expect = 0.058
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
++C CGK + + L H + H+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 29.0 bits (66), Expect = 0.43
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ Y C CGK +L H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 29.0 bits (66), Expect = 0.46
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C CG +K+R L H+++H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 27.5 bits (62), Expect = 1.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
S +K + C CG +K+R L H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 26.7 bits (60), Expect = 2.7
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCD 119
K + C CGK + +L H +H+ +K
Sbjct: 6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 26.3 bits (59), Expect = 3.8
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 336 SVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCD 375
S K + C C K + R L H+ +H+ E+
Sbjct: 5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 26.3 bits (59), Expect = 4.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSH 638
S +K + C CG +K+R L H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 26.0 bits (58), Expect = 6.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
S +PYKC CG G+K D+ H Q VH
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35
Score = 25.6 bits (57), Expect = 7.5
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C +K L H R H
Sbjct: 4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C +C +F S+HL QH + H
Sbjct: 3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 34.0 bits (79), Expect = 0.009
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C++C + F + + H R VH+ +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPS 44
Score = 34.0 bits (79), Expect = 0.009
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
+ C +C + F ++ LN H+R H+
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 32.9 bits (76), Expect = 0.021
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
+ C +CGK FV + L +H++ H+
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 32.9 bits (76), Expect = 0.021
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
+ C +CGK FV + L +H++ H+
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 31.7 bits (73), Expect = 0.047
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C++CG F L+ + +H VH+ +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVHTQETLSGPS 44
Score = 30.2 bits (69), Expect = 0.18
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C++CG +F L H ++H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 29.8 bits (68), Expect = 0.23
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C++CG +F + L H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33
Score = 29.4 bits (67), Expect = 0.34
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVCD 119
K + C++CGK+F ++ L QH +H+++
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y+C+ CGK +++L+ H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31
Score = 27.5 bits (62), Expect = 1.5
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C +CG +F L H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33
Score = 26.7 bits (60), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVCD 375
K +SC+VC K+FV A L H +H++E
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 26.3 bits (59), Expect = 4.3
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 163 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ +PY C++CG F L+ + +H VH
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVH 35
Score = 25.6 bits (57), Expect = 8.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
C+ CGK F S L +H
Sbjct: 15 CNVCGKAFVLSAHLNQH 31
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 34.2 bits (79), Expect = 0.005
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 457 RPYQCTLCSASFKRSSHLKQHGKTHIK 483
R + C +C+ +F R HLK+H ++H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.51
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 705 RPYLCTICSATFKTARALKQHGRTHIKSR 733
R ++C +C+ F LK+H R+H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.1 bits (63), Expect = 0.63
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 401 KFKCILCDRKFHRNSKLNSHMRTHS 425
F C +C R F R L H R+H+
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHT 26
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C C SF + SHL +H + H
Sbjct: 3 SGS-SGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 33.6 bits (78), Expect = 0.011
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E + C C + F + S LN H R H+ +P
Sbjct: 2 SSGSSGTG--EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.036
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C+ C + F + H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.12
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F++ L H + H+ +P
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.12
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F++ L H + H+ +P
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ ++C+ CG SF Q+ L H+++H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 29.8 bits (68), Expect = 0.23
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRH 31
Score = 29.0 bits (66), Expect = 0.52
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C+ CG F + RH + +H+ +P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.58
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K ++C+ CG SF Q+S L H++
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33
Score = 27.9 bits (63), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGKSF S L +H IH+ +K
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K ++C CG SF Q++ L H++
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33
Score = 25.9 bits (58), Expect = 5.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C KSF+ ++ L H+ IH+ E+
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C+ C + F + +Q H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.017
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C C +F S L++H + H
Sbjct: 3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E + C C + F +S+L H R H+ +P
Sbjct: 2 SSGSSGTG--EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.093
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F+ + L EH + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.093
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F+ + L EH + H+ +P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.15
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C+ CG F + + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.46
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEH 31
Score = 29.0 bits (66), Expect = 0.46
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG +F L H+++H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 27.5 bits (62), Expect = 1.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S+L++H IH+ +K
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.6
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG +F S L H++
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33
Score = 25.6 bits (57), Expect = 7.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K ++C+ C K+F++ + L+ H+ IH+ E+
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 9/44 (20%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + + +KC+ C++ F + + +H+R +H+ +P +
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.007
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ + FKC C + F ++S L H R H+ +P
Sbjct: 2 SSGSSGAG--KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.045
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C C K F ++ SL H + H+ +P
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.045
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C C K F ++ SL H + H+ +P
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.053
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ + ++C C +F +SS L H + H
Sbjct: 3 SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 30.6 bits (70), Expect = 0.15
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ + +KC+ C F + + H Q +H+ +P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.46
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ++ F C+ C +F Q +L H+++H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 28.6 bits (65), Expect = 0.70
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ++ + C+ C K +S+L++H
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVH 31
Score = 27.5 bits (62), Expect = 1.9
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F C+ C +F Q S L H++
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33
Score = 26.7 bits (60), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ C K+F +S L H IH+ +K
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C + F R S L+ H ++H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 34.0 bits (79), Expect = 0.008
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC C + F + +H++ H+ R +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGPS 44
Score = 32.1 bits (74), Expect = 0.039
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C+ C +F R S L H ++H
Sbjct: 3 SGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 31.7 bits (73), Expect = 0.044
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C+ CGK F + L+ H + H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.044
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C+ CGK F + L+ H + H+ R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 29.8 bits (68), Expect = 0.22
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L +H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31
Score = 29.0 bits (66), Expect = 0.50
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC CG F + H Q H+ R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSHTGERHSGPS 44
Score = 27.1 bits (61), Expect = 2.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C K+F ++GL +H+ H+ ER
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 27.1 bits (61), Expect = 2.2
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F ++ L H++ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 26.7 bits (60), Expect = 3.7
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F ++S L H++
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ 33
Score = 26.3 bits (59), Expect = 4.0
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F S L H H+ ++
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.5 bits (80), Expect = 0.006
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P+QC C +F S L +H ++H
Sbjct: 3 SGS-SGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 34.1 bits (79), Expect = 0.008
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + +P++C C +F ++ + H R H P
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGP 43
Score = 33.7 bits (78), Expect = 0.011
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 177
F+C CG F + SL++H++ H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 33.7 bits (78), Expect = 0.011
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKCD 681
F+C CG F + SL++H++ H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 33.3 bits (77), Expect = 0.015
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCD 433
F+C C F + L H+R+H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 31.4 bits (72), Expect = 0.065
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKS 336
S + + E+ + C CG + +L H++S
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34
Score = 29.5 bits (67), Expect = 0.34
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
+ C++C + FS + KH ++H
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSH 35
Score = 28.3 bits (64), Expect = 0.76
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ +P++C CG F + + +H + H T P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDPSGP 43
Score = 28.3 bits (64), Expect = 0.98
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CG +F+ S SL +H
Sbjct: 15 CKECGMNFSWSCSLFKH 31
Score = 27.9 bits (63), Expect = 1.3
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +P+ C C F + +L +H R+H
Sbjct: 4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 26.8 bits (60), Expect = 2.9
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQK 114
C CG +F + L +H H
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTD 39
Score = 26.4 bits (59), Expect = 4.5
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTHSIERSYTCHH 319
QC C + F+ L HL++H
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 26.4 bits (59), Expect = 4.8
Identities = 8/36 (22%), Positives = 9/36 (25%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
S K C C +F L H H
Sbjct: 4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 26.0 bits (58), Expect = 6.1
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F C CG +F L+ H +
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33
Score = 25.6 bits (57), Expect = 8.3
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K F C+ CG +F L+ H +
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.006
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + + Y C C + F + H+R +HS +P +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.008
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ + Y C C SF R+ L +H + H
Sbjct: 3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 33.3 bits (77), Expect = 0.015
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E + C C + F R L H R HS +P
Sbjct: 2 SSGSSGTG--EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F + L +H + HS +P
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F + L +H + HS +P
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.094
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ + Y C CG F +L+H + +HS +P +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLHSGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.18
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK A L H
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKH 31
Score = 29.0 bits (66), Expect = 0.41
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG SF + P L H++LH
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 27.9 bits (63), Expect = 1.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG SF + CL H++
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33
Score = 27.9 bits (63), Expect = 1.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF A L +H +HS +K
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C+ CG SF + CL H++
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.006
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +P+QC C F ++SHL H + H
Sbjct: 3 SGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 34.1 bits (79), Expect = 0.007
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F+C C ++F +NS L+SH R H+ +P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.011
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +P++C+ C + F N + H+R VH+ +P +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.064
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK+F +N L+ H + H+ +P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.064
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK+F +N L+ H + H+ +P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +P++C+ CG F N + H Q VH+ +P +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.22
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ F C+ CG F Q L +H+++H
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 29.4 bits (67), Expect = 0.34
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K F C+ CG F Q S L SH++
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR 33
Score = 29.1 bits (66), Expect = 0.53
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ + C CGK+ S+L H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31
Score = 27.1 bits (61), Expect = 2.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K F CE CG F Q + L SH++
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR 33
Score = 26.7 bits (60), Expect = 2.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L H +H+ +K
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 8.0
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K C+ C K F + L H+ +H+ E+
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.5 bits (80), Expect = 0.006
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
KC C + F S+L H RTH D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.3 bits (77), Expect = 0.015
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P KC C + F + + MH+R H + + +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGPS 44
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+CT CGK F L H + H D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+CT CGK F L H + H D +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.067
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P +CT C +F S L H +TH
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 31.4 bits (72), Expect = 0.070
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ C CGK C S L +H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMH 31
Score = 29.4 bits (67), Expect = 0.30
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P KC CG F ++ H Q H + +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTHVDDKHSGPS 44
Score = 28.7 bits (65), Expect = 0.57
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K C CGK+F S+L H H + K
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 27.1 bits (61), Expect = 2.5
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K C C K+F ++ L +H+ H +++
Sbjct: 4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 26.8 bits (60), Expect = 2.9
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ C CG +F + L H++ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 25.6 bits (57), Expect = 7.9
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +P CT C F L H RTH
Sbjct: 4 GSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 34.5 bits (80), Expect = 0.006
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C C + F++ + H+R VHS +P +
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.029
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C C SF+ +S L +H + H
Sbjct: 3 SGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 31.8 bits (73), Expect = 0.044
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E + C C + F S L H R HS +P
Sbjct: 2 SSGSSGTG--EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.061
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C CG F+ +L+H Q VHS +P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVHSGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.082
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F L +H + HS +P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.082
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F L +H + HS +P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 29.1 bits (66), Expect = 0.40
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK AS L H
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKH 31
Score = 28.7 bits (65), Expect = 0.64
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG SF+ L H+++H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 28.3 bits (64), Expect = 0.76
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF AS L +H +HS +K
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG SF+ SCL H++
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33
Score = 26.4 bits (59), Expect = 4.4
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C C +F+ A L +H R H
Sbjct: 2 SS-GSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 25.6 bits (57), Expect = 7.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CGK F + L +H
Sbjct: 15 CKECGKSFRWASCLLKH 31
Score = 25.6 bits (57), Expect = 7.7
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C+ CG SF+ +CL H++
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.006
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + V+PY C+ C + F + H+ +H+ +P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.036
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ + C C + F S L +H H+ +P
Sbjct: 2 SSGSSGTG--VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.064
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ ++PY C C +F S L H H
Sbjct: 3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 30.6 bits (70), Expect = 0.14
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F SL H H+ +P
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.14
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F SL H H+ +P
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ V+PY C+ CG F + + H Q +H+ +P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.45
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + + Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTH 31
Score = 28.6 bits (65), Expect = 0.71
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + ++C+ CG +F +L H+ +H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 27.5 bits (62), Expect = 1.7
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+K + C+ CGK+F S L H IH+ +K
Sbjct: 1 GSS-GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.6
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ K ++C+ CG +F S L +H+
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33
Score = 26.7 bits (60), Expect = 3.7
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S +K + C+ C K+F + L H++IH+ E+
Sbjct: 4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.9
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHK 193
+ V+PY C+ CG F + + H+
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ 32
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +P++C C +F+++ HL H + H
Sbjct: 3 SGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 34.0 bits (79), Expect = 0.008
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
FKC C + F +N L SH+R H+ +P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.024
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +P+KC C + F+ N + H R +H+ +P +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.071
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK F +N L H++ H+ +P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.071
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK F +N L H++ H+ +P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +P+KC CG F+ N + H +H+ +P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.19
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ F C CG +F+Q L +H ++H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 29.0 bits (66), Expect = 0.42
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ + C CGK +L+ H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASH 31
Score = 28.2 bits (64), Expect = 0.95
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K F C CG +F+Q L SH +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33
Score = 27.5 bits (62), Expect = 1.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK+F L H IH+ +K
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K F C+ CG +F+Q L SH +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.1 bits (79), Expect = 0.007
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + RPY+C C + FK + H+R H+ +P +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTGEKPSGPS 44
Score = 34.1 bits (79), Expect = 0.008
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ RPY+C C +FK S L H ++H
Sbjct: 3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 32.1 bits (74), Expect = 0.032
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++CI C + F S L H R+H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.058
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F SL H + H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.058
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F SL H + H+ +P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.30
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ RPY+C CG FK ++ H + H+ +P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICH-RRSHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.37
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + +R Y C CGK S+L H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICH 31
Score = 29.0 bits (66), Expect = 0.52
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ +R + C CG +FK + +L H++ H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 28.3 bits (64), Expect = 0.90
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ Q+ + C CG +FK +S L H++
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR 33
Score = 27.5 bits (62), Expect = 1.8
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK+F S L H H+ +K
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ RPY C C FKT +L H R+H
Sbjct: 4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 25.6 bits (57), Expect = 9.2
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ Q+ + C CG +FK ++ L H++
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR 33
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.1 bits (79), Expect = 0.007
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC+ C + F NS H R H+ RP
Sbjct: 2 SSGSSGTG--EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 33.7 bits (78), Expect = 0.010
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC C + F N H+R +H+ RP +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGPS 44
Score = 33.3 bits (77), Expect = 0.015
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F +S QH + H
Sbjct: 3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 32.2 bits (74), Expect = 0.036
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F N S +H + H+ RP
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 32.2 bits (74), Expect = 0.036
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F N S +H + H+ RP
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 30.6 bits (70), Expect = 0.14
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC CG F N +H Q +H+ RP +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLHTGQRPSGPS 44
Score = 29.9 bits (68), Expect = 0.25
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S+ + H
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQH 31
Score = 28.7 bits (65), Expect = 0.65
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F + H++LH
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 27.9 bits (63), Expect = 1.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK+F S QH +H+ Q+
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 26.0 bits (58), Expect = 6.6
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F S H++
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + V+PY C C + F + +H+R H+ ++P +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGPS 44
Score = 32.5 bits (75), Expect = 0.027
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F S+L H R+H+ V+P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 32.1 bits (74), Expect = 0.036
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ ++PY C+ C+ +F S L H ++H
Sbjct: 3 SGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 30.6 bits (70), Expect = 0.11
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C+ C K F L H + H+ V+P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 30.6 bits (70), Expect = 0.11
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C+ C K F L H + H+ V+P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.8 bits (68), Expect = 0.22
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ V+PY C C F L ++ H Q H+ +P +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSHTGVKPSGPS 44
Score = 29.8 bits (68), Expect = 0.24
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + + Y C C K S L +H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 27.5 bits (62), Expect = 1.6
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + + C C +F + L H++ H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 26.0 bits (58), Expect = 5.1
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ K + C C +F +S L H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 26.0 bits (58), Expect = 5.5
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C+ C+ TF L H R+H
Sbjct: 2 SS-GSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 26.0 bits (58), Expect = 6.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C QC FS KS + H ++H
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSH 35
Score = 25.6 bits (57), Expect = 7.5
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C C K+F S+L H H+ K
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 25.2 bits (56), Expect = 9.7
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C K+F ++ L +H+ H+ +
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F+R+SHL +H H
Sbjct: 3 SGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 33.2 bits (77), Expect = 0.014
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F RNS L H H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.076
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H H+ +P
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.076
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H H+ +P
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.078
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC C + F+ N + H+ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.39
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG F++ L H+ +H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 29.0 bits (66), Expect = 0.52
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC CG F+ N + RH Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.0
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG F++ S L H+
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33
Score = 27.8 bits (63), Expect = 1.3
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK F S L +H IH+ +K
Sbjct: 1 GSSGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 27.4 bits (62), Expect = 1.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y CH CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARH 31
Score = 25.9 bits (58), Expect = 6.4
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG F++ + L H+
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C +CS +F + +HL QH KTH
Sbjct: 3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 31.7 bits (73), Expect = 0.044
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C +C + F + H++ H+ +P +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.046
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C +C + F + + L H +TH+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.088
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC +C K F + L +H K H+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.088
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC +C K F + L +H K H+ +P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.31
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C C K ++L+ H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31
Score = 29.0 bits (66), Expect = 0.41
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C +C +F Q+ L H+K H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 28.7 bits (65), Expect = 0.66
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C +C F + +H Q H+ +P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C +C K+F + L QH H+ +K
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C +C +F Q++ L H+K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33
Score = 26.0 bits (58), Expect = 6.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C VC K+F +A L H+ H+ E+
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.8
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C +CS F L QH +TH
Sbjct: 2 SS-GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 452 VHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S RP++C C F R SHL H + H
Sbjct: 6 SGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
FKC C + F R S L H+R HS +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 33.7 bits (78), Expect = 0.010
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S RP+KC+ C + F + H R +HS + +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGPS 44
Score = 32.5 bits (75), Expect = 0.026
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK F + L H++ HS +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 32.5 bits (75), Expect = 0.026
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK F + L H++ HS +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 31.0 bits (71), Expect = 0.097
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S RP+KC+ CG GF + H +HS + +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHSREKSSGPS 44
Score = 30.6 bits (70), Expect = 0.14
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S ER F C+ CG F +R L H +LH
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S ER + C+ CGK S+L+ H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGH 31
Score = 29.4 bits (67), Expect = 0.37
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ C+ CGK F S L H +HS +K
Sbjct: 6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 28.7 bits (65), Expect = 0.55
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + C+ C K F R+ L H +HS E+
Sbjct: 4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 28.3 bits (64), Expect = 0.77
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S ++ F C+ CG F +RS L H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR 33
Score = 27.9 bits (63), Expect = 1.1
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S ++ F C CG F +R+ L H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR 33
Score = 26.0 bits (58), Expect = 5.8
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S RP+ C C F L H R H
Sbjct: 4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 26.0 bits (58), Expect = 6.8
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
S RP+KC+ CG GF + H +HS
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHS 36
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.1 bits (79), Expect = 0.007
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C C + F + +H R HS +P +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.014
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C+ C +F S+L H +TH
Sbjct: 3 SGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 32.1 bits (74), Expect = 0.041
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F S L HMRTHS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C+ CGK F L HM+ HS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C+ CGK F L HM+ HS +P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.20
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L +H
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIH 31
Score = 29.4 bits (67), Expect = 0.33
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C CG F ++ H HS +P +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTHSGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.81
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F + L H + H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 26.7 bits (60), Expect = 2.8
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F +S L H +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33
Score = 26.7 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK+F + S L H HS +K
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 26.0 bits (58), Expect = 6.6
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C+ C F + L H RTH
Sbjct: 2 SS-GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 25.6 bits (57), Expect = 7.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C K+F +++ L +H HS E+
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 25.6 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C +C FS KS + H +TH
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTH 35
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ RP++C C SF +S+HL QH + H
Sbjct: 3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 32.9 bits (76), Expect = 0.022
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E KC C + F +++ L H R H+ +P
Sbjct: 3 SGSSGTG--ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.030
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + RP+KC+ C + F + + H+R +H+ +P +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.079
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+C CGK F+++ L +H + H+ +P
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.079
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+C CGK F+++ L +H + H+ +P
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ RP+KC+ CG F + +++H Q +H+ +P +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.40
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ER C+ CG SF Q L H+++H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 28.6 bits (65), Expect = 0.63
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ER + C+ CGK +++L H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 28.2 bits (64), Expect = 0.95
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ H C+ CGKSF ++ L QH IH+ +K
Sbjct: 1 GSSGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.6
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ ++ C+ CG SF Q + L H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 25.5 bits (57), Expect = 9.5
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSH 638
+ ++ C CG SF Q L H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 25.2 bits (56), Expect = 9.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
+ H C+ C KSF+ A L H+ IH+ E+
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 34.0 bits (79), Expect = 0.008
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S PY+C+ C +F R L H +TH
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 32.5 bits (75), Expect = 0.024
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F+R +L SH RTH+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 32.1 bits (74), Expect = 0.036
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC+ CGK F + L H + H+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 32.1 bits (74), Expect = 0.036
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC+ CGK F + L H + H+
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.8 bits (68), Expect = 0.25
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ C CGK+F +L H H+ + G
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.4 bits (67), Expect = 0.29
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 670 KRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
S PY+C CG F ++ H Q H+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISH-QRTHAGESGPSS 41
Score = 29.4 bits (67), Expect = 0.30
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 422 RTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S PY+C C + F + H+R H+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41
Score = 27.5 bits (62), Expect = 1.5
Identities = 9/27 (33%), Positives = 9/27 (33%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLH 333
S E Y C CGK L H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISH 29
Score = 26.3 bits (59), Expect = 4.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 365 IHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E + C CG +F ++ L +H++ H
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 26.3 bits (59), Expect = 4.3
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S PY C+ C F L H RTH
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 26.3 bits (59), Expect = 4.4
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
+ C C K+F + L H+ H+ E G
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.008
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + P+ C C + F ++ +H++ +H+ RP +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTGERPSGPS 44
Score = 32.5 bits (75), Expect = 0.025
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E F C C + F + L H + H+ RP
Sbjct: 2 SSGSSGTG--ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 31.7 bits (73), Expect = 0.052
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F C+ CGK F +L H K H+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 31.7 bits (73), Expect = 0.052
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F C+ CGK F +L H K H+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 31.7 bits (73), Expect = 0.053
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ P+ C CG F +++ H Q +H+ RP +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIHTGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.054
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ P+ C+ C F ++L H K H
Sbjct: 3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 31.3 bits (72), Expect = 0.062
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E + C CGK +NL +H
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIH 31
Score = 28.6 bits (65), Expect = 0.62
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E F+C CG F + L H+K+H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 27.1 bits (61), Expect = 2.2
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ + F+C CG F ++ L H+K
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK 33
Score = 27.1 bits (61), Expect = 2.2
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK F + L H IH+ ++
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 26.3 bits (59), Expect = 4.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
C C K F ++ L +H+ IH+ ER
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 25.5 bits (57), Expect = 7.4
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ P++C+ C F L H + H
Sbjct: 4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.1 bits (79), Expect = 0.008
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S+ + +QC C F SHL QH + H
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 32.5 bits (75), Expect = 0.031
Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S + ++C C + F + H+R +H+ +P +
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.048
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+C C R F S LN H R H+ +P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.069
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S + ++C CG GF L + +H Q +H+ +P +
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S +S+ CH CG+ S+L+ H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQH 31
Score = 29.4 bits (67), Expect = 0.35
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S + C CG F + L H+++H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 29.1 bits (66), Expect = 0.46
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+C CG+ F L +H + H+ +P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.1 bits (66), Expect = 0.46
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+C CG+ F L +H + H+ +P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.85
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S K C CG F +S L H++
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33
Score = 28.3 bits (64), Expect = 0.92
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K H C CG+ F S L QH IH+ +K
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.95
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S KS C CG F ++ L H++
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33
Score = 27.9 bits (63), Expect = 1.1
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
S + ++C CG GF L + +H Q +H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIH 35
Score = 27.5 bits (62), Expect = 1.5
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K H C C + F ++ L H+ IH+ E+
Sbjct: 4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 5.2
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S+T+ + C C F L QH R H
Sbjct: 4 GSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.1 bits (79), Expect = 0.008
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + +PY+C C + F + +H+R +H+ P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP 43
Score = 32.5 bits (75), Expect = 0.024
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C+ C SF + S L H + H
Sbjct: 3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 32.1 bits (74), Expect = 0.037
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + S+L+ H R H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.095
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC+ CGK F+K L+ H + H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.095
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC+ CGK F+K L+ H + H+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ +PY+C CG F + H Q +H+ P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIHTGENPSGP 43
Score = 29.4 bits (67), Expect = 0.32
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L +H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31
Score = 27.1 bits (61), Expect = 2.2
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG SF ++ L H+++H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 26.7 bits (60), Expect = 2.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF S+L H IH+ +
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 26.7 bits (60), Expect = 3.0
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ +K + C CG SF ++S L H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31
Score = 26.3 bits (59), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C KSF+ ++ L +H+ IH+ E
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 25.6 bits (57), Expect = 8.0
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C+ C +F L H R H
Sbjct: 4 GSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.008
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P+ C C +F L QH + H
Sbjct: 3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 34.0 bits (79), Expect = 0.009
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E F CI C + F + LN H R H+ +P
Sbjct: 2 SSGSSGTG--EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.012
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P+ C C + F + + H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK F + L +H + H+ +P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.037
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK F + L +H + H+ +P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.31
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P+ C CG F + + +H + +H+ +P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.35
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F C CG +F L H+++H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 29.4 bits (67), Expect = 0.36
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK L+ H
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31
Score = 28.6 bits (65), Expect = 0.57
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F C CG +F L H++
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33
Score = 27.1 bits (61), Expect = 2.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGK+F L QH IH+ +K
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.6
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K F C CG +F L H++
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33
Score = 25.9 bits (58), Expect = 5.5
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K C C K+F + GL H+ IH+ E+
Sbjct: 4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.009
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P++C C + F FN + +H+R +H+ P +
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTGENPSGPS 44
Score = 32.5 bits (75), Expect = 0.031
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C C SF +S L H + H
Sbjct: 3 SGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 31.7 bits (73), Expect = 0.051
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+C C + F NS+L H R H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 31.4 bits (72), Expect = 0.072
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
EC CGK F N L H + H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 31.4 bits (72), Expect = 0.072
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
EC CGK F N L H + H+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.099
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P++C CG F N ++ H Q +H+ P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIHTGENPSGPS 44
Score = 29.0 bits (66), Expect = 0.52
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK S L +H
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31
Score = 27.5 bits (62), Expect = 1.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF S+L H IH+ +
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 26.7 bits (60), Expect = 3.6
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ C CG SF L H+++H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.009
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY C C +F S+ L +H + H
Sbjct: 3 SGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 32.5 bits (75), Expect = 0.031
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PY CD C + F + ++ H+R +H+ +P +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.036
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F +++L H R H+ +P
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.051
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PY CD CG F L+ +++RH Q +H+ +P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.052
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F + L H + H+ +P
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.052
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F + L H + H+ +P
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.14
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ +VCD CG +F L H+++H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 30.2 bits (69), Expect = 0.16
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K +VCD CG +F + L H++
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
Score = 29.8 bits (68), Expect = 0.26
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ Y C +CGK ++ L H
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRH 31
Score = 28.2 bits (64), Expect = 0.91
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
CD CGK+F ++EL +H IH+ +K
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 0.95
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K +VC+ CG +F L H++
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
Score = 25.9 bits (58), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
CD CGK F S L RH
Sbjct: 15 CDYCGKAFGLSAELVRH 31
Score = 25.9 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
S +PY CD CG F L+ +++RH Q +H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.009
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C C S+ + HL QH + H
Sbjct: 3 SGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 33.3 bits (77), Expect = 0.014
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
FKC C + +++ L H R H+ +P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.035
Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P+KC C + + + H+R VH+ +P +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.094
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
F+C CGK + + L +H + H+ +P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.094
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
F+C CGK + + L +H + H+ +P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.16
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P+KC CG + + +H Q VH+ +P +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.26
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F C CG S+ QR L H+++H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 29.0 bits (66), Expect = 0.51
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK +L+ H
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQH 31
Score = 27.9 bits (63), Expect = 1.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K F C CG S+ QR L H++
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33
Score = 27.5 bits (62), Expect = 1.5
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K C CGKS+ L QH +H+ +K
Sbjct: 1 GSSGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 6.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K F C CG S+ QR L H++
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 38.5 bits (89), Expect = 0.009
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 42/175 (24%)
Query: 70 SSQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRS 129
+ S R + H ++H + SFF AS+L++ F +
Sbjct: 2 DAYST-RPLTLSHGSLEHVL-LVPTASFFIASQLQE-QFNKILPEP-------------- 44
Query: 130 CLWSHKKWNHEELSYKFECTLCGK--KFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNY 187
+ +E + E L GK +V + + + V ++C F+ Y
Sbjct: 45 ---TEGFAADDEPTTPAE--LVGKFLGYVSSLVEPSKVGQFDQV----LNLCLTEFENCY 95
Query: 188 DMLRHKQDVHS-----------NIIHNCNLCSATFKTARGLKQHEKKHMTSILLT 231
L D+H+ ++ L K+ K S L
Sbjct: 96 --LEGN-DIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFR 147
Score = 38.1 bits (88), Expect = 0.014
Identities = 97/579 (16%), Positives = 162/579 (27%), Gaps = 217/579 (37%)
Query: 257 ETF-KSKPSLRAHIWKCQMEPQTILETYNILSQCPVCK-LTFTDKRKLKSH-------LK 307
E F K P EP T E L V K L + S L
Sbjct: 35 EQFNKILPEPTEGFAA-DDEPTTPAE----L----VGKFLGYVSSLVEPSKVGQFDQVLN 85
Query: 308 T--HSIERSYTCHHCGKQLCG------ASNLSLHIKSVHLKIKDHSCDVCDKSFVNRAGL 359
E Y L G A+ L + +K K+ + K+++ A +
Sbjct: 86 LCLTEFENCY--------LEGNDIHALAAKLLQENDTTLVKTKE----LI-KNYI-TARI 131
Query: 360 RLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKL---------------E----Y 400
+ + AL+ +A+L E Y
Sbjct: 132 MAKRPFDKKSN--------------SALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLY 177
Query: 401 K-FKCILCDRKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQ--MHKRCVHSNIR 457
+ + ++ D L+ +RT D E+ F +I + + +
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLD--------AEKVFTQGLNILEWLE----NPSNT 225
Query: 458 PYQCTLCSA--SFKRS-----SH----LKQHGKTHIKPEHDLKTKMN-LFTCHQC----- 500
P + L S S +H K G T P +L++ + Q
Sbjct: 226 PDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFT---PG-ELRSYLKGATGHSQGLVTAV 281
Query: 501 --------QSTEEAGCKCNMML----MKCQLLHSHLNTQDNKINYSCEQ-CKV---QFSC 544
+S + K +L ++C + + + + + S E V S
Sbjct: 282 AIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSI 341
Query: 545 K----SDMRKHAK---THLPAIGRSYTCDQCGKQLSYAKTLAN---HI---------KGV 585
++ + +HLPA GKQ+ + L N ++ G+
Sbjct: 342 SNLTQEQVQDYVNKTNSHLPA----------GKQVEIS--LVNGAKNLVVSGPPQSLYGL 389
Query: 586 HLKIKKHSCENCA----------KSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCL 635
+L ++K + K FS L SP HS L AS L
Sbjct: 390 NLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHL------LVPASDLINKDL 443
Query: 636 WSHK-KWNHEEL---IYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNY 691
+ +N +++ +Y T G SD+R I ++
Sbjct: 444 VKNNVSFNAKDIQIPVY---DTFDG----------------SDLRVLSGSISE---RI-V 480
Query: 692 DMLRHKQDVHSTTRPYLCTICSATFKTARALKQHGRTHI 730
D + V T T A THI
Sbjct: 481 DCIIRLP-VKWET---------TTQFKA--------THI 501
Score = 35.8 bits (82), Expect = 0.065
Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 36/142 (25%)
Query: 569 GKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQHSP----VH----SEQK-- 618
G L Y + A + V + H + FS+ ++ ++P +H ++
Sbjct: 1632 GMDL-YKTSKA--AQDVWNRADNHFKDTYG---FSILDIVINNPVNLTIHFGGEKGKRIR 1685
Query: 619 ----SFVCELCGAS-------FKQRTCLWSHKKWNH-EELIYKFECT---LCGKKFVKNY 663
+ + E FK+ + + + L+ + T L +
Sbjct: 1686 ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPAL----TLMEK 1741
Query: 664 SLYEHMKRHSDVRPYKCDICGH 685
+ +E +K + P GH
Sbjct: 1742 AAFEDLKSKG-LIPADATFAGH 1762
Score = 30.0 bits (67), Expect = 3.7
Identities = 10/84 (11%), Positives = 20/84 (23%), Gaps = 27/84 (32%)
Query: 31 QMEPETILETLGHQFESQLFTGPMEKCDI-------MCDQCGKHFTSSQSLARHIKCVHL 83
+++ E I + + S F + ++ +K
Sbjct: 1700 KLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPAL-------TLMEKAAFEDLK---- 1748
Query: 84 KIKHHWCDICGKSFFAASELKQHS 107
I + FA HS
Sbjct: 1749 ----SKGLIPADATFAG-----HS 1763
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.009
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ R Y+C+ C +F R S L H + H
Sbjct: 3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 33.2 bits (77), Expect = 0.016
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + R Y+C C + F + MH+R +H+ +P +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.035
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC+ CGK F + +L H + H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.035
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC+ CGK F + +L H + H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.049
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F R S L H R H+ +P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.074
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ R Y+C CG F ++ H Q +H+ +P +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH-QRIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.21
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ER Y C CGK S L +H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 29.0 bits (66), Expect = 0.41
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+H+ C CGK+F S L H IH+ +K
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.67
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ER + C CG +F ++ L H+++H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 28.2 bits (64), Expect = 1.0
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ ++ + C CG +F ++S L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 26.3 bits (59), Expect = 3.9
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ R Y C+ C F L H R H
Sbjct: 4 GSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 25.9 bits (58), Expect = 6.3
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSH 638
+ ++ + C CG +F +++ L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.009
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C +C + F + +H+R +HS +P +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGPS 44
Score = 31.3 bits (72), Expect = 0.077
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C++C +F L H + H
Sbjct: 3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 30.9 bits (71), Expect = 0.10
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC++CGK F SL H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC++CGK F SL H + HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 30.9 bits (71), Expect = 0.11
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C +C + F L+ H R HS +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.40
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C +CG F + H Q +HS +P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIHSGKKPSGPS 44
Score = 28.2 bits (64), Expect = 0.88
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK +LS+H
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31
Score = 27.1 bits (61), Expect = 2.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C +CG +F R +L H+++H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 27.1 bits (61), Expect = 2.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C +CGK+F L H IHS +K
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 25.9 bits (58), Expect = 5.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C CGK F+ QSL+ H
Sbjct: 15 CSVCGKAFSHRQSLSVH 31
Score = 25.9 bits (58), Expect = 5.6
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C +CG +F R L H++
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
Score = 25.9 bits (58), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C VC K+F +R L +H+ IHS ++
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.7 bits (78), Expect = 0.010
Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C IC + F + +H++ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.036
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C++C SF + S L H + H
Sbjct: 3 SGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 31.0 bits (71), Expect = 0.090
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C +C + F + S+L+ H + H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC++CGK F K L+ H + H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC++CGK F K L+ H + H+ +P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.17
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK S L +H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31
Score = 29.8 bits (68), Expect = 0.25
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C ICG F + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.0
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C +CG SF ++ L H+++H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 27.5 bits (62), Expect = 1.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C ICGKSF S+L H IH+ +K
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ +K + C +CG SF ++S L H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31
Score = 26.3 bits (59), Expect = 4.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C +C KSF ++ L +H+ IH+ E+
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.010
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C C F ++SHL H + H
Sbjct: 3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 33.6 bits (78), Expect = 0.011
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PYKC+ C + F N + H R +H+ +P +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.011
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +NS L +H R H+ +P
Sbjct: 2 SSGSSGSG--EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.085
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.085
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.18
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C+ CG F Q L H ++H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 29.8 bits (68), Expect = 0.23
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PYKC+ CG F N + H +H+ +P +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.52
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C+ CG F Q S L +H +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33
Score = 28.6 bits (65), Expect = 0.72
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNH 31
Score = 27.1 bits (61), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L H IH+ +K
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.6
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K + C CG F Q + L +H +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.010
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+CD+C + F + + H+R VHS +P +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.014
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C +C +F + L QH + H
Sbjct: 3 SGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 31.3 bits (72), Expect = 0.078
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C +C + F ++ L H R HS +P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC +C K F + SL +H + HS +P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC +C K F + SL +H + HS +P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+CD+C F + + +H Q VHS +P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVHSGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.47
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
CD+C K+F + L QH +HS +K
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.60
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C C K ++L+ H
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQH 31
Score = 28.2 bits (64), Expect = 0.80
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + CD+C +F +L H+++H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 27.9 bits (63), Expect = 1.1
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+ +K + CD+C +F + L H+
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQ 32
Score = 25.9 bits (58), Expect = 6.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + CDVC K+F + A L H+ +HS E+
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 25.5 bits (57), Expect = 8.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
CD C K F+ SL +H
Sbjct: 15 CDVCRKAFSHHASLTQH 31
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 33.7 bits (78), Expect = 0.011
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
R ++C+ C F ++S+ QH + H
Sbjct: 3 SGS-SGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 32.5 bits (75), Expect = 0.025
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
R ++C CG F + ++H + +H+ +P +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.026
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + R ++C C + F + H+R +H+ +P +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.045
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
ERG C CG F Q H+++H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 31.7 bits (73), Expect = 0.051
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + ER + C CGK ASN H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQH 31
Score = 31.4 bits (72), Expect = 0.075
Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E +C C + F + S H R H+ +P
Sbjct: 3 SGSSGHG--ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.24
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
C+ CGK F++ + +H + H+ +P
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.24
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
C+ CGK F++ + +H + H+ +P
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.47
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
++G C CG F Q S H++
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33
Score = 28.7 bits (65), Expect = 0.57
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ H C CGK F AS QH IH+ +K
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.80
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
R ++C CG F + ++H + +H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35
Score = 27.1 bits (61), Expect = 2.1
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
++ C CG F Q + H++
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33
Score = 26.3 bits (59), Expect = 4.7
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + H C C K F+ + H+ IH+ E+
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.7
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
R + C+ C F A QH R H
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 25.6 bits (57), Expect = 9.5
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 61 CDQCGKHFTSSQSLARH 77
C CGK F + + +H
Sbjct: 15 CSDCGKFFLQASNFIQH 31
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.011
Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F+ + ++ H+ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.028
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +S L +H H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F+ S+L H H
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 29.8 bits (68), Expect = 0.25
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F + +L H H+ +P
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.25
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F + +L H H+ +P
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.28
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F+ + ++ H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.33
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK SNL+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTH 31
Score = 29.0 bits (66), Expect = 0.43
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG +F+ S L +H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33
Score = 29.0 bits (66), Expect = 0.47
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG +F+ L H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 27.1 bits (61), Expect = 2.0
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG +F+ + L +H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33
Score = 26.7 bits (60), Expect = 2.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F A S L H IH+ +K
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 6.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C+ C K+F + L H++IH+ E+
Sbjct: 4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.012
Identities = 9/44 (20%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P++C C++ F ++ +H+R H+ +P +
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.016
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F+C C + F+ S L H RTH+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.094
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C+ C +F S+L H +TH
Sbjct: 3 SGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 30.5 bits (70), Expect = 0.12
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C C K SNL +H
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVH 31
Score = 30.1 bits (69), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
FEC+ C K F +L H + H+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.1 bits (69), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
FEC+ C K F +L H + H+ +P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.39
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P++C C F +++ H Q H+ +P +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.2
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F C C +F + L H++ H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 26.3 bits (59), Expect = 4.0
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ +K F C C +F +S L H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH 31
Score = 26.3 bits (59), Expect = 4.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C C K+F S L H H+ +K
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 8.7
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K C C K+F ++ L +H+ H+ E+
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.012
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ PY+C C +F R L H +TH
Sbjct: 3 SGS-SGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 33.3 bits (77), Expect = 0.014
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + PY+C C + F Y + H+R H+ +P +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR-THAGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.025
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F + Y L H + H+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.025
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F + Y L H + H+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.057
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F R +L SH RTH+ +P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.17
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ PY+C CG F Y ++ H Q H+ +P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH-QRTHAGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.56
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E Y CH CGK L H
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISH 31
Score = 27.9 bits (63), Expect = 1.4
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E + C CG +F ++ L +H++ H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 26.7 bits (60), Expect = 2.7
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ + + C CG +F ++ L SH++
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR 33
Score = 26.3 bits (59), Expect = 4.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ C CGK+F +L H H+ +K
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 33.6 bits (78), Expect = 0.012
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F +++HL QH + H
Sbjct: 3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 30.9 bits (71), Expect = 0.094
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + + L H R H+ +P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F + L +H + H+ +P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F + L +H + H+ +P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.24
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C C + F + H+R VH+ +P +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.39
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C CG F +++H Q VH+ +P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.69
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F Q L H+++H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 28.2 bits (64), Expect = 0.87
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK ++L H
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31
Score = 27.9 bits (63), Expect = 1.1
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F Q + L H++
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33
Score = 27.5 bits (62), Expect = 1.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F + L QH +H+ +K
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 5.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C+ CG +F Q T L H++
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.2 bits (77), Expect = 0.013
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F ++SHL +H H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +NS L H H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.040
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F N + H+ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.28
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F N + RH + +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.28
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F Q L H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 27.9 bits (63), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31
Score = 27.5 bits (62), Expect = 1.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F Q S L H+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG 33
Score = 27.1 bits (61), Expect = 2.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L +H IH+ +K
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 33.2 bits (77), Expect = 0.013
Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + +PY+C+ C++ F ++ +H+R H+
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.020
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F S+L H +TH
Sbjct: 3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 32.5 bits (75), Expect = 0.029
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F+ S L H RTH+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.1 bits (69), Expect = 0.17
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ C K SNL +H
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVH 31
Score = 29.8 bits (68), Expect = 0.21
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC C K F +L H + H+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.8 bits (68), Expect = 0.21
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC C K F +L H + H+
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 1.2
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ +PY+C+ C F +++ H Q H+
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 1.3
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ C +F + L H++ H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 27.1 bits (61), Expect = 2.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ C K+F S L H H+ + G
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 26.3 bits (59), Expect = 3.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C +C+ F+ KS++ H +TH
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTH 35
Score = 26.3 bits (59), Expect = 4.7
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ C +F +S L H++
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33
Score = 25.9 bits (58), Expect = 6.0
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY C C F T L H RTH
Sbjct: 4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 25.5 bits (57), Expect = 7.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C K+F ++ L +H+ H+ E G
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 33.2 bits (77), Expect = 0.013
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ ++PY C C +F+ S+L H +TH
Sbjct: 3 SGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 33.2 bits (77), Expect = 0.015
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + ++PY C+ C + F+ + +H R H+
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43
Score = 30.5 bits (70), Expect = 0.12
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F S L H RTH+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 0.39
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F L H + H+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 0.39
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F L H + H+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 0.52
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + + Y C+ CGK S L +H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIH 31
Score = 28.6 bits (65), Expect = 0.56
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGK+F + S L H+ H+ + G
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.8 bits (63), Expect = 1.0
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + +VC+ CG +F+ + L H + H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 27.8 bits (63), Expect = 1.1
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ ++PY C+ CG F+ ++ H H+
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 3.2
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+ K +VC+ CG +F+ +S L H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT 32
Score = 25.9 bits (58), Expect = 5.1
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +PY+C C F++ L H RTH
Sbjct: 2 SS-GSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 25.9 bits (58), Expect = 5.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C K+F +++ L +H H+ E G
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 25.5 bits (57), Expect = 9.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C +C F KS + H +TH
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTH 35
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 33.3 bits (77), Expect = 0.013
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E ++KC C + F RNS+L+ H + H+ +P
Sbjct: 3 SGSSGTG--EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.017
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ + Y+C C F R+S L QH K H
Sbjct: 3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 32.9 bits (76), Expect = 0.021
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + + YKC+ C + F N + H++ +H+ +P +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.043
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L +H K H+ +P
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.043
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L +H K H+ +P
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.093
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ + YKC+ CG F N + +H Q +H+ +P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.68
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F + L H+K+H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 28.3 bits (64), Expect = 0.98
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 75 ARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGK F S+L QH IH+ +K
Sbjct: 1 GSSGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F + S L H+K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33
Score = 27.9 bits (63), Expect = 1.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S LS H
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQH 31
Score = 25.9 bits (58), Expect = 5.7
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG F + + L H+K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33
Score = 25.6 bits (57), Expect = 8.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ + YKC+ CG F N + +H Q +H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIH 35
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 33.2 bits (77), Expect = 0.013
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++C C SF SS L H + H
Sbjct: 3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 32.5 bits (75), Expect = 0.027
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F+C C + F +S+L +H R H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.032
Identities = 9/44 (20%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P++C C + F + + H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQR-IHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.055
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
FEC CGK F + L H + H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.055
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
FEC CGK F + L H + H+ +P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.27
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P++C CG F ++ + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH-QRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.38
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ + C CGK +S L+ H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH 31
Score = 27.9 bits (63), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF +S+L H IH+ +K
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ F C CG SF L H+++H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 26.3 bits (59), Expect = 4.0
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +P+ C C +F + L H R H
Sbjct: 2 SS-GSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 25.9 bits (58), Expect = 6.9
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CGK F+ S LA H
Sbjct: 15 CAECGKSFSISSQLATH 31
Score = 25.5 bits (57), Expect = 9.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ +K F C CG SF S L +H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH 31
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.013
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F ++SHL H + H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 33.3 bits (77), Expect = 0.015
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +NS L +H R H+ V+P
Sbjct: 2 SSGSSGTG--EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 32.9 bits (76), Expect = 0.021
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F N + H+R +H+ ++P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPS 44
Score = 31.3 bits (72), Expect = 0.065
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H + H+ V+P
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 31.3 bits (72), Expect = 0.065
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H + H+ V+P
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F N + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIHTGVKPSGPS 44
Score = 29.4 bits (67), Expect = 0.29
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F Q L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 28.6 bits (65), Expect = 0.74
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANH 31
Score = 27.5 bits (62), Expect = 1.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F Q S L +H++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQR 33
Score = 27.5 bits (62), Expect = 1.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L H IH+ K
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 25.6 bits (57), Expect = 8.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C+ C K F + L H+ IH+ +
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 33.3 bits (77), Expect = 0.014
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + S +PY+C+ C + F + + +H+R H+ +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43
Score = 32.5 bits (75), Expect = 0.026
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C C +F S L H +TH
Sbjct: 3 SGS-SGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 30.2 bits (69), Expect = 0.15
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F S L H RTH+ V
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.8 bits (68), Expect = 0.26
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F+ L H + H+ V
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.8 bits (68), Expect = 0.26
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F+ L H + H+ V
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.4 bits (67), Expect = 0.28
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSC 346
S + S E+ Y C+ CGK S L +H + H + S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTHAGVSGPSS 43
Score = 28.3 bits (64), Expect = 0.89
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
S +PY+C+ CG F ++ H + H+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTHAGVSGPSS 43
Score = 27.9 bits (63), Expect = 1.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C+ CG +F + L H++ H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 27.1 bits (61), Expect = 2.3
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S L H H+ G
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 26.3 bits (59), Expect = 4.4
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C+ CG +F +S L H++
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER 33
Score = 26.0 bits (58), Expect = 6.4
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C+ C K+F+ ++ L +H+ H+ G
Sbjct: 4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 25.6 bits (57), Expect = 7.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 533 YSCEQCKVQFSCKSDMRKHAKTH 555
Y C +C F KS + H +TH
Sbjct: 13 YECNECGKAFIWKSLLIVHERTH 35
Score = 25.6 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C F L H RTH
Sbjct: 2 SS-GSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.014
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + S +PY C+ C + F + H+R H+ +P +
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.021
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C C + F + S L++H RTH+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.024
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY C C +F + S L H +TH
Sbjct: 3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 31.3 bits (72), Expect = 0.081
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F + L H + H+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.081
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F + L H + H+ +P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S E+ Y C+ CGK S LS H
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAH 31
Score = 29.4 bits (67), Expect = 0.31
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S E+ + C+ CG +F Q+ L AH++ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 28.7 bits (65), Expect = 0.58
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
S +PY C+ CG F + H Q H+ +P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C+ CG +F Q+S L +H++
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33
Score = 27.1 bits (61), Expect = 2.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S L H H+ +K
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 8.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C TF L H RTH
Sbjct: 4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 25.6 bits (57), Expect = 9.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K + C CG +F Q++ L +H++
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.2 bits (77), Expect = 0.014
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F ++SHL +H H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 33.2 bits (77), Expect = 0.015
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +NS L H H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.050
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F N + H+ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.26
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F N ++RH + +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.28
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F Q L H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 27.8 bits (63), Expect = 1.1
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F Q S L H+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33
Score = 27.4 bits (62), Expect = 1.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRH 31
Score = 26.7 bits (60), Expect = 3.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L +H IH+ +K
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.015
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY+C C +F + HL QH + H
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 33.3 bits (77), Expect = 0.015
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + S +PY+C C + F + HKR VH+ R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP 43
Score = 32.1 bits (74), Expect = 0.031
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + LN H R H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.4 bits (72), Expect = 0.078
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC C K F++ L +H + H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.4 bits (72), Expect = 0.078
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC C K F++ L +H + H+ R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 30.6 bits (70), Expect = 0.13
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + S ++ Y C C K +L+ H
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH 31
Score = 30.2 bits (69), Expect = 0.19
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
S +PY+C C F + +H + VH+ R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVHTGERSSGP 43
Score = 29.8 bits (68), Expect = 0.28
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C C K+F L QH +H+ ++
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 29.0 bits (66), Expect = 0.44
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C C K+F+ L HK +H+ ER
Sbjct: 4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 27.9 bits (63), Expect = 1.2
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
S ++ + C C +F Q L HK++H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 26.0 bits (58), Expect = 6.2
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + C C +F Q L HK+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR 33
Score = 25.6 bits (57), Expect = 9.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKSFVCE 623
K + C+ C K+F + L QH VH+ ++S
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 25.2 bits (56), Expect = 9.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C C TF L QH R H
Sbjct: 4 GSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 33.2 bits (77), Expect = 0.015
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F + ++L QH + H
Sbjct: 3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 32.5 bits (75), Expect = 0.027
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C C + F ++ H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.029
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + + L H R H+ +P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.099
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F + +L +H + H+ +P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.099
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F + +L +H + H+ +P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.22
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK +NL+ H
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQH 31
Score = 29.4 bits (67), Expect = 0.35
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C CG F ++ +H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.53
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F Q+ L H+++H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 28.2 bits (64), Expect = 0.82
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F Q++ L H++
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33
Score = 27.1 bits (61), Expect = 2.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F + L QH IH+ +K
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.3
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG +F Q+ L H++
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33
Score = 25.5 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
K + C C K+F +A L H+ IH+ E+
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.2 bits (77), Expect = 0.015
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F ++SHL +H H
Sbjct: 3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ + +KC C + F +NS L H H+ +P
Sbjct: 2 SSGSSGTG--KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.033
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F N + H+ +H+ +P +
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.17
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.17
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.22
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ++ + C+ CG F Q L H+ +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 29.4 bits (67), Expect = 0.33
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F N + RH + +H+ +P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.1
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F Q S L H+
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33
Score = 27.1 bits (61), Expect = 2.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ++ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARH 31
Score = 27.1 bits (61), Expect = 2.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L +H IH+ +K
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 8.6
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG F Q + L H+
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33
Score = 25.2 bits (56), Expect = 9.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 61 CDQCGKHFTSSQSLARH 77
C++CGK FT + LARH
Sbjct: 15 CNECGKVFTQNSHLARH 31
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 34.8 bits (79), Expect = 0.015
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 289 CPVCK-LTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
CP C+ + LK H++ + +TCHHCGKQL + + H+ + H
Sbjct: 37 CPTCQAVGRKTIEGLKKHMENCK-QEMFTCHHCGKQLRSLAGMKYHVMANH 86
Score = 27.1 bits (59), Expect = 6.2
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 590 KKHSCENC-AKSFFSLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEEL 646
SC C A ++ L++H +Q+ F C CG + + H NH L
Sbjct: 33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL 89
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.015
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E +KC C + F +NS L H R H+ +P
Sbjct: 2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 33.3 bits (77), Expect = 0.016
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F ++SHL +H + H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 32.9 bits (76), Expect = 0.021
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F N + H+R VH+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPS 44
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F +N L H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F +N L H + H+ +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 29.8 bits (68), Expect = 0.24
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F N + RH + VH+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVHTGGKPSGPS 44
Score = 29.4 bits (67), Expect = 0.33
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F Q L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 27.5 bits (62), Expect = 1.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31
Score = 27.1 bits (61), Expect = 2.1
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F Q S L H++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRR 33
Score = 26.7 bits (60), Expect = 2.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L +H +H+ K
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 25.6 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 61 CDQCGKHFTSSQSLARH 77
C++CGK FT + LARH
Sbjct: 15 CNECGKVFTQNSHLARH 31
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.016
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C+ C + F + H+R VH+ +P +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.028
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PYQC C +F ++S L +H + H
Sbjct: 3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 32.5 bits (75), Expect = 0.030
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F + SKL H R H+ +P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.063
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F + L H + H+ +P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.063
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F + L H + H+ +P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.070
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C+ CG F + RH Q VH+ +P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.95
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + + Y C+ CGK S L+ H
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARH 31
Score = 28.3 bits (64), Expect = 0.98
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + + C+ CG +F Q L H+++H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 27.9 bits (63), Expect = 1.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C+ CGK+F S+L +H +H+ +K
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 4.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+ K + C+ CG +F Q S L H+
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQ 32
Score = 25.6 bits (57), Expect = 7.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 61 CDQCGKHFTSSQSLARH 77
C++CGK F+ + LARH
Sbjct: 15 CNECGKAFSQTSKLARH 31
Score = 25.2 bits (56), Expect = 9.9
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ +PY+C+ CG F + RH Q VH
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.016
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C F+ +S+L +H + H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 33.3 bits (77), Expect = 0.017
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C + F NS L+ H R H+ +P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.024
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F+ N + H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.072
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F N L H + H+ +P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.072
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F N L H + H+ +P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.22
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F+ N + RH Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.45
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG F+ S L H++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
Score = 29.0 bits (66), Expect = 0.52
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG F+ L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 28.6 bits (65), Expect = 0.57
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S LS H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRH 31
Score = 27.5 bits (62), Expect = 1.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK F S L +H IH+ +K
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.7
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ +K + C CG F+ + L H++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
Score = 25.9 bits (58), Expect = 6.4
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C+ C K F + + L H+ IH+ E+
Sbjct: 4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.017
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F+ + +H+ HS +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.030
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C + F S L H THS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.066
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F+ S L H TH
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 31.0 bits (71), Expect = 0.090
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F SL H HS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.090
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F SL H HS +P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.41
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIH 31
Score = 28.3 bits (64), Expect = 0.78
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F+ + H Q HS +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIH-QATHSGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.84
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG +F+ R +L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 27.5 bits (62), Expect = 1.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHK 135
+ +K + C+ CG +F+ RS L H+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQ 32
Score = 26.7 bits (60), Expect = 3.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F A S L H HS +K
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 25.6 bits (57), Expect = 8.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 61 CDQCGKHFTSSQSLARH 77
C++CGK F + SLA H
Sbjct: 15 CNECGKAFRARSSLAIH 31
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.017
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ + ++CT C +F R S L H K H
Sbjct: 3 SGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F+C C + F R S L+ H + H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.035
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
FECT CGK F + +L H K H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.035
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
FECT CGK F + +L H K H+ +P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.11
Identities = 8/44 (18%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + + ++C C + F + MH++ +H+ +P +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.26
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + + + C CGK S LS+H
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMH 31
Score = 28.3 bits (64), Expect = 0.78
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
KH C CGK+F S L H IH+ +K
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.1
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ + ++C CG F + H Q +H+ +P +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.2
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ + F C CG +F ++ L H+K+H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ K F C CG +F ++S L H+K
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33
Score = 25.9 bits (58), Expect = 6.3
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ + + CT C F L H + H
Sbjct: 4 GSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 32.9 bits (76), Expect = 0.018
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ PY+C C F R L H KTH
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 31.3 bits (72), Expect = 0.059
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F + L H K HS
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 31.3 bits (72), Expect = 0.059
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F + L H K HS
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 31.3 bits (72), Expect = 0.074
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F R +L SH +THS
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 30.2 bits (69), Expect = 0.19
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + PY+C C + F + H++ HS
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS 43
Score = 29.4 bits (67), Expect = 0.32
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E Y C CGK L H
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSH 31
Score = 28.6 bits (65), Expect = 0.54
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ C CGK F +L H HS Q G
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 27.5 bits (62), Expect = 1.7
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ PY+C CG F ++ H Q HS
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH-QKTHSGQSGPSS 43
Score = 26.7 bits (60), Expect = 3.1
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 335 KSVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S + C C K F + L H+ HS + G
Sbjct: 4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 26.3 bits (59), Expect = 4.0
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E + C CG F ++ L +H+K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 25.9 bits (58), Expect = 6.7
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ PY C C F L H +TH
Sbjct: 4 GSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 32.9 bits (75), Expect = 0.018
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ P++C+ C F + ++L QH +TH
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 29.4 bits (66), Expect = 0.31
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E F C C F QR L H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 29.4 bits (66), Expect = 0.32
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 399 EYKFKCILCDRKFHRNSKLNSHMRTHSD 426
E FKC CDR F + + L H RTH+
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 28.3 bits (63), Expect = 0.76
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ + F C C F QR+ L H++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 28.3 bits (63), Expect = 1.0
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ + F C C F QR L H++
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 27.1 bits (60), Expect = 2.2
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERG 371
C CD+ F R L H+ H+ + G
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 26.7 bits (59), Expect = 3.0
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ P+ C+ C F L QH RTH
Sbjct: 4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 26.4 bits (58), Expect = 4.1
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKR 450
S + + P+KC C++ F + H+R
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 25.6 bits (56), Expect = 7.6
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 198
+ P+KC C F +++H + H+
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTHA 36
Score = 25.6 bits (56), Expect = 7.6
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHS 702
+ P+KC C F +++H + H+
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTHA 36
Score = 25.6 bits (56), Expect = 9.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSD 170
F+C+ C + F + L +H + H+
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 25.6 bits (56), Expect = 9.3
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSD 674
F+C+ C + F + L +H + H+
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.019
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PYKC+ C + F + H+R +H+ +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.028
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+KC C + F + SKL H R H+ +P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.039
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F ++S L +H + H
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 30.9 bits (71), Expect = 0.089
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
++C CGK F + L H + H+ +P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.089
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
++C CGK F + L H + H+ +P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.095
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PYKC+ CG F + RH Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.60
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG +F Q L H+++H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 28.3 bits (64), Expect = 0.88
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S L+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARH 31
Score = 27.1 bits (61), Expect = 2.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S+L +H IH+ +K
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.8
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG +F Q S L H++
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.8 bits (76), Expect = 0.019
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ RPY CT+C +F S+L +H K H
Sbjct: 3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 32.5 bits (75), Expect = 0.030
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + RPY C +C + F ++ H++ +H+ +P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.033
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ CT+CGK F +L +H K H+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.033
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ CT+CGK F +L +H K H+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.041
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ C +C + F S L H + H+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.13
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ RPY C +CG F ++++H Q +H+ +P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ER Y C CGK SNL H
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKH 31
Score = 29.8 bits (68), Expect = 0.28
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ER ++C +CG +F R L H+K+H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 28.6 bits (65), Expect = 0.59
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ ++ ++C +CG +F RS L H+K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33
Score = 27.1 bits (61), Expect = 2.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+ + C +CGK+F S L +H IH+ +K
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
+ ++ ++C +CG +F R+ L H+K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33
Score = 25.5 bits (57), Expect = 7.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
C CGK FT +L +H
Sbjct: 15 CTVCGKAFTDRSNLIKH 31
Score = 25.5 bits (57), Expect = 7.5
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 695 RHKQDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ RPY+CT+C F L +H + H
Sbjct: 2 SS-GSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 25.5 bits (57), Expect = 8.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
+ + C VC K+F +R+ L H+ IH+ E+
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 32.9 bits (76), Expect = 0.020
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+PY+C C +F + L H + H
Sbjct: 2 SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 31.8 bits (73), Expect = 0.045
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 420 HMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPY 459
+ +PY+CD C + F + +H R VH+ P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40
Score = 31.0 bits (71), Expect = 0.079
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E+ + CD CG +F Q+ +L H ++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 29.5 bits (67), Expect = 0.28
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPY 430
E ++C C + F + L H+R H+ P
Sbjct: 1 GSSGSSGG--EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 29.5 bits (67), Expect = 0.32
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 305 HLKTHSIERSYTCHHCGKQLCGASNLSLH 333
+ E+ Y C CGK +L +H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30
Score = 29.5 bits (67), Expect = 0.34
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
+PY+CD CG F ++ H VH+ + P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVHTGSGPS 40
Score = 29.1 bits (66), Expect = 0.40
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S +K + CD CG +F Q+ L H +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32
Score = 28.3 bits (64), Expect = 0.75
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 174
+ C CGK F + SL H++ H+ P
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 28.3 bits (64), Expect = 0.75
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
+ C CGK F + SL H++ H+ P
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 26.8 bits (60), Expect = 2.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
CDQCGK F+ SL H
Sbjct: 14 CDQCGKAFSQKGSLIVH 30
Score = 26.4 bits (59), Expect = 3.8
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S +K + C+ CG +F Q+ L H +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32
Score = 26.0 bits (58), Expect = 5.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQK 114
CD CGK+F L H +H+
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 26.0 bits (58), Expect = 5.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
K + CD C K+F + L +H +H+
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 26.0 bits (58), Expect = 6.0
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+PY C C F +L H R H
Sbjct: 3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 25.6 bits (57), Expect = 7.3
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+PY+CD CG F ++ H VH
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.020
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY C C + F ++ H++ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPS 44
Score = 32.1 bits (74), Expect = 0.032
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY C C +F S+L +H K H
Sbjct: 3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 31.7 bits (73), Expect = 0.053
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY C CG F + ++++H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIHTKQKPSGPS 44
Score = 31.7 bits (73), Expect = 0.057
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 389 AHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
+ E + C C + F S L H + H+ +P
Sbjct: 2 SSGSSGTG--EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 31.3 bits (72), Expect = 0.061
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F +L +H K H+ +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 31.3 bits (72), Expect = 0.061
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F +L +H K H+ +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK SNL H
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKH 31
Score = 28.6 bits (65), Expect = 0.56
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ ++C CG +F R L H+K+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 27.1 bits (61), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F S L +H IH++QK
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 26.7 bits (60), Expect = 2.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K ++C CG +F RS L H+K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 25.9 bits (58), Expect = 5.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CGK FT +L +H
Sbjct: 15 CAECGKAFTIRSNLIKH 31
Score = 25.6 bits (57), Expect = 7.2
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 164 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVH 197
+ +PY C CG F + ++++H Q +H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIH 35
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 32.9 bits (76), Expect = 0.021
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
F+C C + F L +H R H+ +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 32.5 bits (75), Expect = 0.027
Identities = 8/44 (18%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +P++C C + F+ ++ H+R +H+ + +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPSS 44
Score = 32.1 bits (74), Expect = 0.032
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +P++CT C SF+ +L H + H
Sbjct: 3 SGS-SGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 31.7 bits (73), Expect = 0.042
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
FECT CGK F +L H + H+ +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 31.7 bits (73), Expect = 0.042
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
FECT CGK F +L H + H+ +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 31.4 bits (72), Expect = 0.063
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ++ + C HCGK NL H
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 29.8 bits (68), Expect = 0.23
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +P++C CG F+ +++ H Q +H+ + +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIHTGEKSGPSS 44
Score = 28.7 bits (65), Expect = 0.56
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ++ F C CG SF+ + L H+++H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 27.9 bits (63), Expect = 1.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C CGKSF A L H IH+ +K
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 27.1 bits (61), Expect = 2.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ QK F C CG SF+ + L +H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 26.0 bits (58), Expect = 6.5
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ +P+ CT C +F+ L H R H
Sbjct: 4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.022
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F S L +H + H+ +P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.027
Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQC 461
S + + +PY+C C + F ++ H++ +H+ +P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.043
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F S+L H K H
Sbjct: 3 SGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 31.3 bits (72), Expect = 0.064
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+ C CGK F +L+ H K H+ +P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.064
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+ C CGK F +L+ H K H+ +P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.17
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C CGK SNL H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTH 31
Score = 28.6 bits (65), Expect = 0.65
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C CG +F R L+ H+K+H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 28.6 bits (65), Expect = 0.69
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLC 709
+ +PY+C CG F ++ H Q +H+ +P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.1
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 81 VHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
K + C CGK+F S L H IH+ +K
Sbjct: 6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C CG +F RS L++H+K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33
Score = 26.3 bits (59), Expect = 4.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 336 SVHLKIKDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
S K + C C K+F +R+ L H+ IH+ E+
Sbjct: 5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 8.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CGK FT +L H
Sbjct: 15 CAECGKAFTDRSNLFTH 31
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 33.0 bits (74), Expect = 0.022
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
S +PY C +C FKR + H ++H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 28.0 bits (61), Expect = 1.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 168 HSDVRPYKCDICGHGFKLNYDMLRH 192
S +PY C +CG FK M H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYH 29
Score = 28.0 bits (61), Expect = 1.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 672 HSDVRPYKCDICGHGFKLNYDMLRH 696
S +PY C +CG FK M H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYH 29
Score = 27.6 bits (60), Expect = 1.7
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 424 HSDVRPYKCDICEQHFKFNYDIQMHKR 450
S +PY C +C FK + H R
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 27.2 bits (59), Expect = 2.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 701 HSTTRPYLCTICSATFKTARALKQHGRTH 729
S +PY C +C FK + H R+H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 26.4 bits (57), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLHDAKLE 399
S E+ + C +CG FK++ + H + HD +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 38
Score = 26.0 bits (56), Expect = 5.3
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 399 EYKFKCILCDRKFHRNSKLNSHMRTHS 425
E + C +C +F R +++ H+R+H
Sbjct: 8 EKPYSCPVCGLRFKRKDRMSYHVRSHD 34
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.5 bits (75), Expect = 0.024
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + +PY+C+ C + F + H+ +H+ +P +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGPS 44
Score = 31.3 bits (72), Expect = 0.067
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC CGK F SL H H+ +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 31.3 bits (72), Expect = 0.067
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC CGK F SL H H+ +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 31.3 bits (72), Expect = 0.070
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ +PY+C C +F S L H H
Sbjct: 3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 31.3 bits (72), Expect = 0.080
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
++C C + F S L +H H+ +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.34
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ +PY+C+ CG F + + H Q +H+ +P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIHTGKKPSGPS 44
Score = 28.7 bits (65), Expect = 0.61
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + E+ Y C+ CGK S+L+ H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTH 31
Score = 27.9 bits (63), Expect = 1.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ E+ + C+ CG +F R +L H+ +H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 27.1 bits (61), Expect = 2.1
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
+ +K + C+ CG +F RS L +H+
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
Score = 27.1 bits (61), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVC 118
C+ CGK+F S L H IH+ +K
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 26.3 bits (59), Expect = 3.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C+QCGK F+ SL H
Sbjct: 15 CNQCGKAFSVRSSLTTH 31
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.5 bits (75), Expect = 0.030
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 448 HKRCVHSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
+ R Y+C+ C +F + S L H + H
Sbjct: 3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 32.1 bits (74), Expect = 0.035
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 419 SHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCT 462
S + + R Y+C C + F + MH+R +H +P +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.081
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSDVRPYKC 432
E ++C C + F + S L+ H R H +P
Sbjct: 3 SGSSGTG--ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 176
+EC+ CGK F++ +L H + H +P
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYKC 680
+EC+ CGK F++ +L H + H +P
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.21
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 667 EHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
+ R Y+C CG F + H Q +H +P +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH-QRIHRGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.32
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 304 SHLKTHSIERSYTCHHCGKQLCGASNLSLH 333
S + + ER Y C CGK S LS+H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 29.0 bits (66), Expect = 0.46
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
+ ER + C CG +F Q+ L H+++H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 27.9 bits (63), Expect = 1.1
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 105 QHSFIHSEQKGFVCDLCGASFKQRSCLWSH 134
+ ++ + C CG +F Q+S L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 27.9 bits (63), Expect = 1.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQKGFVC 118
+H+ C CGK+F S L H IH +K
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 25.9 bits (58), Expect = 6.1
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 609 QHSPVHSEQKSFVCELCGASFKQRTCLWSH 638
+ ++ + C CG +F Q++ L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 25.6 bits (57), Expect = 8.7
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
+ R Y C+ C F L H R H
Sbjct: 4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 25.6 bits (57), Expect = 8.9
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEERGFVC 374
+ + C C K+F+ ++ L +H+ IH E+
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 34.0 bits (77), Expect = 0.034
Identities = 16/82 (19%), Positives = 25/82 (30%), Gaps = 3/82 (3%)
Query: 415 SKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIR---PYQCTLCSASFKRS 471
+ + + Y+C C H H N+ Y C C+ KR
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 472 SHLKQHGKTHIKPEHDLKTKMN 493
L +H + E + K M
Sbjct: 64 DALSEHNLKYHPGEENFKLTMV 85
Score = 33.2 bits (75), Expect = 0.053
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Query: 607 LRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYK--FECTLCGKKFVKNYS 664
+ + + C+ C H H ++ + C C + +
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 665 LYEH-MKRHSDVRPYKCDI 682
L EH +K H +K +
Sbjct: 66 LSEHNLKYHPGEENFKLTM 84
Score = 32.8 bits (74), Expect = 0.070
Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 302 LKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIK---DHSCDVCDKSFVNRAG 358
+ + +E Y C +C Q + + H+ S H + + C C+
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 359 LRLHKL-IHSEERGFVCDL 376
L H L H E F +
Sbjct: 66 LSEHNLKYHPGEENFKLTM 84
Score = 32.4 bits (73), Expect = 0.11
Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Query: 160 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSNIIHN----CNLCSATFKTAR 215
+ + + Y+C C H H N++ N C C+ K
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 216 GLKQHEKKH 224
L +H K+
Sbjct: 65 ALSEHNLKY 73
Score = 32.1 bits (72), Expect = 0.17
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
Query: 390 HKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRT-HSDVR---PYKCDICEQHFKFNYDI 445
H + K+E ++C C + + H+ + H +V Y C C K +
Sbjct: 7 HHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDAL 66
Query: 446 QMHKRCVHSNIRPYQCTL 463
H H ++ T+
Sbjct: 67 SEHNLKYHPGEENFKLTM 84
Score = 31.7 bits (71), Expect = 0.21
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 99 AASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEE--LSYKFECTLCGKKFV 156
A + + G+ C C + H H L+ + C C
Sbjct: 2 AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 157 KNYSLYEH-MKRHSDVRPYKCDI 178
+ +L EH +K H +K +
Sbjct: 62 RYDALSEHNLKYHPGEENFKLTM 84
Score = 29.4 bits (65), Expect = 1.1
Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Query: 664 SLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTR---PYLCTICSATFKTAR 720
+ + + Y+C C H H Y+C C+ K
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 721 ALKQHGRTH 729
AL +H +
Sbjct: 65 ALSEHNLKY 73
Score = 29.4 bits (65), Expect = 1.3
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 520 LHSHLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLP--AIGRSYTCDQCGKQLSYAKT 577
H + + + Y C+ C Q + H + P + SY C +C
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 578 LANHIKGVH 586
L+ H H
Sbjct: 66 LSEHNLKYH 74
Score = 28.2 bits (62), Expect = 3.6
Identities = 12/55 (21%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Query: 288 QCPVCKLTFTDKRKLKSHLKTH----SIERSYTCHHCGKQLCGASNLSLHIKSVH 338
+C C D H+ + + SY C C LS H H
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 31.8 bits (73), Expect = 0.046
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 457 RPYQCTLCSASFKRSSHLKQHGKTH 481
R Y+C C SF++ L H + H
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIH 33
Score = 27.2 bits (61), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 174
+EC CGK F + SL H + H+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 27.2 bits (61), Expect = 2.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPY 678
+EC CGK F + SL H + H+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 26.8 bits (60), Expect = 2.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 61 CDQCGKHFTSSQSLARH 77
C +CGK F SL H
Sbjct: 13 CQECGKSFRQKGSLTLH 29
Score = 26.4 bits (59), Expect = 3.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 307 KTHSIERSYTCHHCGKQLCGASNLSLH 333
S +R Y C CGK +L+LH
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLH 29
Score = 26.4 bits (59), Expect = 3.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 366 HSEERGFVCDLCGASFKQRPALWAHKKLH 394
S +R + C CG SF+Q+ +L H+++H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 26.4 bits (59), Expect = 4.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQK 114
C CGKSF L H IH+
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.0 bits (58), Expect = 4.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPY 430
++C C + F + L H R H+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 25.6 bits (57), Expect = 7.9
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 676 RPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
R Y+C CG F+ + H + +H+ + P
Sbjct: 9 RVYECQECGKSFRQKGSLTLH-ERIHTGSGPS 39
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 33.0 bits (74), Expect = 0.070
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 289 CPVCK-LTFTDKRKLKSHLKT-HSIERSYTCHHCGKQLCGASNLSLHIKSVH 338
CP C +T LK H++ ++ + C HC KQ + L+ H + H
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78
Score = 26.8 bits (58), Expect = 8.7
Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 615 SEQKSFVCELCGA-SFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMKRHS 673
E+ VC C + K L H + ++L +C C K+F L H
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHME-VCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78
Query: 674 DVRP 677
+P
Sbjct: 79 SAKP 82
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 30.7 bits (69), Expect = 0.10
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 400 YKFKCILCDRKFHRNSKLNSHMRTHSDVRPYK 431
YKF C C ++F R+ L+ H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 29.5 bits (66), Expect = 0.22
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYK 175
YKF C C K+F+++ L +H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 29.5 bits (66), Expect = 0.22
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 648 YKFECTLCGKKFVKNYSLYEHMKRHSDVRPYK 679
YKF C C K+F+++ L +H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 28.3 bits (63), Expect = 0.60
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 459 YQCTLCSASFKRSSHLKQHGKTHIKPEHDLK 489
+ C C F RS HL +H H + +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEERR 33
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 29.9 bits (68), Expect = 0.16
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 457 RPYQCT--LCSASFKRSSHLKQHGKTH 481
RP+ CT C F RS L++H +TH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 27.2 bits (61), Expect = 1.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 407 CDRKFHRNSKLNSHMRTHSDVR 428
C ++F R+ +L H RTH+ +
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 29.9 bits (68), Expect = 0.18
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEER 370
+ C C KSF R L +H+ S+
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 29.9 bits (68), Expect = 0.18
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 362 HKLIHSEERGFVCDLCGASFKQRPALWAHKKLH 394
E ++C CG SF QR +L H++
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 29.6 bits (67), Expect = 0.26
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 402 FKCILCDRKFHRNSKLNSHMRTHSDVRPYK 431
+ C C + F + L H R+ S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 29.6 bits (67), Expect = 0.26
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 146 FECTLCGKKFVKNYSLYEHMKRHSDVRPYK 175
+ C CGK F + SL H + S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 29.6 bits (67), Expect = 0.26
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 650 FECTLCGKKFVKNYSLYEHMKRHSDVRPYK 679
+ C CGK F + SL H + S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 29.6 bits (67), Expect = 0.28
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 453 HSNIRPYQCTLCSASFKRSSHLKQHGKTH 481
PY C C SF + L H ++
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 28.0 bits (63), Expect = 1.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 61 CDQCGKHFTSSQSLARH 77
C QCGK FT SLA H
Sbjct: 14 CGQCGKSFTQRGSLAVH 30
Score = 28.0 bits (63), Expect = 1.0
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 305 HLKTHSIERSYTCHHCGKQLCGASNLSLH 333
+ E Y C CGK +L++H
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30
Score = 28.0 bits (63), Expect = 1.1
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 106 HSFIHSEQKGFVCDLCGASFKQRSCLWSHKK 136
S + ++C CG SF QR L H++
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR 32
Score = 27.6 bits (62), Expect = 1.3
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQK 114
+ C CGKSF L H S+
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 26.5 bits (59), Expect = 3.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 610 HSPVHSEQKSFVCELCGASFKQRTCLWSHKK 640
S + ++C CG SF QR L H++
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR 32
Score = 26.1 bits (58), Expect = 4.6
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 698 QDVHSTTRPYLCTICSATFKTARALKQHGRTH 729
PYLC C +F +L H R+
Sbjct: 3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 25.7 bits (57), Expect = 6.2
Identities = 10/40 (25%), Positives = 12/40 (30%), Gaps = 1/40 (2%)
Query: 668 HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDVHSTTRPY 707
PY C CG F + H Q S + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVH-QRSCSQSGPS 40
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 34.0 bits (77), Expect = 0.20
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 692 DMLRHKQDVHSTTRP----YLCTICSATFKTARALKQHGRT 728
++ Q + T Y+C +C+A F T AL +H R+
Sbjct: 98 AVVSDPQSMKVTPIVNPSSYVCNVCNARFSTMSALSEHLRS 138
Score = 32.5 bits (73), Expect = 0.67
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 60 MCDQCGKHFTSSQSLARHIKCVH 82
+C+ C F++ +L+ H++ H
Sbjct: 118 VCNVCNARFSTMSALSEHLRSDH 140
Score = 32.1 bits (72), Expect = 0.92
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 114 KGFVCDLCGASFKQRSCLWSHKKWNH 139
+VC++C A F S L H + +H
Sbjct: 115 SSYVCNVCNARFSTMSALSEHLRSDH 140
Score = 30.9 bits (69), Expect = 1.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 314 SYTCHHCGKQLCGASNLSLHIKSVH 338
SY C+ C + S LS H++S H
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRSDH 140
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 29.5 bits (66), Expect = 0.22
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 400 YKFKCILCDRKFHRNSKLNSHMRTHSDVR 428
YKF C C ++F R+ L H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.7 bits (64), Expect = 0.40
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMKRHSDVR 172
YKF C C K+F+++ L H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.7 bits (64), Expect = 0.40
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 648 YKFECTLCGKKFVKNYSLYEHMKRHSDVR 676
YKF C C K+F+++ L H+ H + +
Sbjct: 1 YKFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.9 bits (62), Expect = 0.97
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 459 YQCTLCSASFKRSSHLKQHGKTHIK 483
+ C C F RS HL H H
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHEN 27
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 29.5 bits (65), Expect = 0.30
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 289 CPVCKLTFTDKRKLKSHLKTHSIERS 314
CPVC+ +F++ R +KSH+KT+ E S
Sbjct: 12 CPVCEKSFSEDRLIKSHIKTNHPEVS 37
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 28.9 bits (65), Expect = 0.49
Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 457 RPYQCTL--CSASFKRSSHLKQHGKTH 481
+ + C + C + ++SHL+ H + H
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWH 33
Score = 25.8 bits (57), Expect = 5.4
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 84 KIKHHWCDI--CGKSFFAASELKQHSFIHSEQK 114
K K H C I CGK + S L+ H H+ ++
Sbjct: 5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.9 bits (61), Expect = 0.93
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 367 SEERGFVCDLCGASFKQRPALWAHKKLHDA 396
S + +CD+CG FK + L +HK LH A
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTA 34
Score = 27.1 bits (59), Expect = 1.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHKLIHSEE 369
K H CD+C K F ++ L+ HKL+H+ +
Sbjct: 8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 27.1 bits (59), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQ 113
K H CD+CGK F + LK H +H+
Sbjct: 8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 25.6 bits (55), Expect = 6.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 111 SEQKGFVCDLCGASFKQRSCLWSHK 135
S K +CD+CG FK + L SHK
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHK 29
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 30.3 bits (67), Expect = 0.96
Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 6/105 (5%)
Query: 385 PALWAHKKLHDAKLEYKFKCILCDRKFHRNSKLNSHMRTHSD---VRPYKCDICEQHFKF 441
++ + +C +C S+ +H ++ VR Y +
Sbjct: 16 KDAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVP 75
Query: 442 NYDIQMHKRCVHSNIRPYQ-CTLCSASFKRSSHLKQH--GKTHIK 483
+ + + C +C+ +F + H GKTHIK
Sbjct: 76 AKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHYIGKTHIK 120
Score = 29.5 bits (65), Expect = 1.4
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Query: 287 SQCPVCKLTFTDKRKLKSHLKTHS----IERSYTCHHCGKQLCGASNLSLHIKSVHLKIK 342
+QC VC + + +H ++ + R + + + + + +
Sbjct: 33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDR 92
Query: 343 DHSCDVCDKSFVNRAGLRLH 362
C VC+ +F + H
Sbjct: 93 SKCCPVCNMTFSSPVVAESH 112
Score = 28.0 bits (61), Expect = 5.5
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 6/93 (6%)
Query: 645 ELIYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLRHK----QDV 700
+ +C +C + H + + + + + + + K +
Sbjct: 28 HIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEIS 87
Query: 701 HSTTRPYLCTICSATFKTARALKQH--GRTHIK 731
R C +C+ TF + + H G+THIK
Sbjct: 88 DGEDRSKCCPVCNMTFSSPVVAESHYIGKTHIK 120
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 27.4 bits (61), Expect = 1.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 705 RPYLCTICSATFKTARALKQHGRTHIKSRT 734
R Y C+ C F++A+AL H H + R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDRA 34
Score = 25.9 bits (57), Expect = 4.8
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 145 KFECTLCGKKFVKNYSLYEHMKRHSDVR 172
+ C+ C ++F +L HM H R
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 25.9 bits (57), Expect = 4.8
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 649 KFECTLCGKKFVKNYSLYEHMKRHSDVR 676
+ C+ C ++F +L HM H R
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 25.5 bits (56), Expect = 7.5
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 401 KFKCILCDRKFHRNSKLNSHMRTHSDVR 428
+ C C R+F L HM H R
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHRRDR 33
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type
zinc finger, KIAA0530, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1
Length = 73
Score = 28.0 bits (61), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 671 RHSDVRPYKC--DICGHGFKLNYDMLRHKQDVHSTTRPYLCT 710
R+S RPY+C C F + +++ H Q VH + P
Sbjct: 21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA 62
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 30.4 bits (68), Expect = 2.5
Identities = 40/275 (14%), Positives = 65/275 (23%), Gaps = 43/275 (15%)
Query: 232 CDQCHSTEEAGCKCNRQLLQCSLCSETFKSKPSLRAHIWKCQMEPQTILETYNILSQCP- 290
C C + +Q QC +CS H +C + CP
Sbjct: 51 CSHCT---DFIWGFGKQGFQCQVCSFVV--------HK-RCHEF---------VTFSCPG 89
Query: 291 VCKLTFTDKRKLKSHLKTHSIERSYTCHHCGKQLCGASNLSLHIKSVHLKIKDHSCDVCD 350
K +D + K K H+ C HCG L G L + CD C
Sbjct: 90 ADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYG------------LIHQGMKCDTCM 137
Query: 351 KSFVNRAGLRLHKLIHSEERGFVCDLCGASFKQRPALWAHKKLHDAKLEYKFKCILCDRK 410
+ R + S C + R + AH + + L
Sbjct: 138 MNVHKRC----VMNVPSL-----CGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMD 188
Query: 411 FHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKRCVHSNIRPYQCTLCSASFKR 470
+ S ++ D + + L +
Sbjct: 189 PNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDW 248
Query: 471 SSHLKQHGKTHIKPEHDLKTKMNLFTCHQCQSTEE 505
+ + K + + S EE
Sbjct: 249 DLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEE 283
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 27.1 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 86 KHHWCDICGKSFFAASELKQHSFIHSEQK 114
K H C CG+ FF L +H +H QK
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 27.1 bits (59), Expect = 2.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 590 KKHSCENCAKSFFSLAELRQHSPVHSEQKS 619
K H C C + FF L +H +H QK+
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKN 40
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 27.1 bits (60), Expect = 2.6
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 401 KFKCIL--CDRKFHRNSKLNSHMRTHSDVR 428
F+C+ C + F R + SH++TH + R
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 25.6 bits (56), Expect = 8.5
Identities = 8/29 (27%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 457 RPYQCTL--CSASFKRSSHLKQHGKTHIK 483
+ ++C C+ +FKR +++ H +TH++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 25.6 bits (56), Expect = 9.7
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 145 KFECTL--CGKKFVKNYSLYEHMKRHSDVR 172
FEC C K F + Y++ H++ H + R
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 25.6 bits (56), Expect = 9.7
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 649 KFECTL--CGKKFVKNYSLYEHMKRHSDVR 676
FEC C K F + Y++ H++ H + R
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 29.8 bits (66), Expect = 3.0
Identities = 6/42 (14%), Positives = 14/42 (33%)
Query: 409 RKFHRNSKLNSHMRTHSDVRPYKCDICEQHFKFNYDIQMHKR 450
++ H S+ H + + + EQ D++
Sbjct: 188 KRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
Score = 29.0 bits (64), Expect = 5.1
Identities = 6/39 (15%), Positives = 12/39 (30%)
Query: 523 HLNTQDNKINYSCEQCKVQFSCKSDMRKHAKTHLPAIGR 561
H N + E+ + D+R + G+
Sbjct: 199 HRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQGK 237
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein
structure initiative, midwest center for structural
genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP:
e.59.1.1
Length = 309
Score = 29.8 bits (66), Expect = 3.1
Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 27/116 (23%)
Query: 87 HHWCDICGKSFFAASELKQHSFIHSEQKGF---VCDLCGASFKQRSCLWSHKKWNHEELS 143
C CG S A ++Q ++ G C LC W++ +
Sbjct: 182 RTLCPACG-SPPMAGMIRQGG----KETGLRYLSCSLCACE------------WHYVRI- 223
Query: 144 YKFECTLCGKKFVKNYSLYE---HMKRHSDVRPYKCDICGHGFKLNYDMLRHKQDV 196
+C+ C + Y E + +R C C K Y D
Sbjct: 224 ---KCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQFYLEFDRHADA 276
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+
and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia
coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Length = 883
Score = 30.1 bits (68), Expect = 3.1
Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 3/22 (13%)
Query: 598 AKSF-FSLAEL--RQHSPVHSE 616
K F L + RQ S H+E
Sbjct: 383 VKCFGVPLVRIDIRQESTRHTE 404
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 38
Score = 26.6 bits (58), Expect = 3.3
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 284 NILSQCPV--CKLTFTDKRKLKSHLKTHS 310
IL +CP C + DK KL++HLK H+
Sbjct: 7 GILLKCPTDGCDYSTPDKYKLQAHLKVHT 35
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 26.3 bits (57), Expect = 3.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 701 HSTTRPYLCTICSATFKTARALKQHGRTH 729
S RP++C IC + F T +H + H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 26.4 bits (57), Expect = 4.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 459 YQCTLCSASFKRSSHLKQHGKTH 481
Y+C+ C A+F HL QH KTH
Sbjct: 13 YECSKCQATFNLRKHLIQHQKTH 35
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 26.7 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 368 EERGFVCDLCGASFKQRPALWAHK 391
++ + CD+CG +K RP L H
Sbjct: 4 RDKPYACDICGKRYKNRPGLSYHY 27
Score = 25.5 bits (55), Expect = 9.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 342 KDHSCDVCDKSFVNRAGLRLHK 363
K ++CD+C K + NR GL H
Sbjct: 6 KPYACDICGKRYKNRPGLSYHY 27
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 26.0 bits (57), Expect = 4.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 172 RPYKCDICGHGFKLNYDMLRHKQDVHS 198
+ Y C +C F ++RH Q +HS
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHS 27
Score = 26.0 bits (57), Expect = 4.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 676 RPYKCDICGHGFKLNYDMLRHKQDVHS 702
+ Y C +C F ++RH Q +HS
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHS 27
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding,
nucleotide-binding, transferase; HET: AP5; 2.00A
{Marinibacillus marinus}
Length = 216
Score = 28.7 bits (65), Expect = 5.6
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 8/40 (20%)
Query: 90 CDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRS 129
C CG ++ H+ + +CD G QR
Sbjct: 130 CKTCGATY--------HTIFNPPAVEGICDKDGGELYQRI 161
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 25.4 bits (55), Expect = 6.1
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 459 YQCTLCSASFKRSSHLKQHGKT 480
+ C C F RS L +H KT
Sbjct: 3 FACPACPKRFMRSDALSKHIKT 24
Score = 25.4 bits (55), Expect = 7.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 400 YKFKCILCDRKFHRNSKLNSHMRT 423
Y F C C ++F R+ L+ H++T
Sbjct: 1 YAFACPACPKRFMRSDALSKHIKT 24
Score = 25.4 bits (55), Expect = 7.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 144 YKFECTLCGKKFVKNYSLYEHMK 166
Y F C C K+F+++ +L +H+K
Sbjct: 1 YAFACPACPKRFMRSDALSKHIK 23
Score = 25.4 bits (55), Expect = 7.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 648 YKFECTLCGKKFVKNYSLYEHMK 670
Y F C C K+F+++ +L +H+K
Sbjct: 1 YAFACPACPKRFMRSDALSKHIK 23
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination,
ATP-binding, cytoplasm, metal-binding, nucleotide
biosynthesis, nucleotide-binding; HET: AP5; 1.58A
{Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A*
2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A*
1s3g_A*
Length = 216
Score = 28.7 bits (65), Expect = 6.2
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 8/41 (19%)
Query: 89 WCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRS 129
C +CG ++ H + + +CD G QR+
Sbjct: 129 ICSVCGTTY--------HLVFNPPKTPGICDKDGGELYQRA 161
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 25.4 bits (55), Expect = 7.0
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 561 RSYTCDQCGKQLSYAKTLANHIK 583
+ Y C++CGK+ + LANHI+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIR 23
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR
complex function; HET: ADP; 2.31A {Pyrococcus furiosus}
PDB: 3ur3_C 4doz_A
Length = 693
Score = 28.9 bits (63), Expect = 7.0
Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Query: 603 SLAELRQHSPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKN 662
+ + K + C +CG + ++ H L + C +C K
Sbjct: 251 ERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPMCLIKRYYP 310
Query: 663 YSLYEHM-KRHSDVRPYKCDICGHGFKLNYDMLRHKQDV 700
+ ++ + ++ +D K V
Sbjct: 311 VWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLV 349
Score = 28.9 bits (63), Expect = 7.4
Identities = 13/99 (13%), Positives = 30/99 (30%), Gaps = 1/99 (1%)
Query: 99 AASELKQHSFIHSEQKGFVCDLCGASFKQRSCLWSHKKWNHEELSYKFECTLCGKKFVKN 158
++ + KG+ C +CG + ++ H L + C +C K
Sbjct: 251 ERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPMCLIKRYYP 310
Query: 159 YSLYEHM-KRHSDVRPYKCDICGHGFKLNYDMLRHKQDV 196
+ ++ + ++ +D K V
Sbjct: 311 VWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLV 349
>1fgj_A Hydroxylamine oxidoreductase; nitrification; HET: HEM HEC; 2.80A
{Nitrosomonas europaea} SCOP: a.138.1.3
Length = 546
Score = 29.0 bits (63), Expect = 7.4
Identities = 20/191 (10%), Positives = 46/191 (24%), Gaps = 3/191 (1%)
Query: 491 KMNLFTCHQCQSTEEAGCKCNMMLMKCQLLHSHLNTQDNKINYSCEQCKVQFSCKSDMRK 550
++ + + L ++ C C V + K
Sbjct: 101 NLDKIRNLKSDDPLYYKKGKLEEVENNLRSMGKLGEKETLKEVGCIDCHVDVNKKDKADH 160
Query: 551 HAKTHLPAIGRSYTCDQCGKQLSYAKTLANHIKGVHLKIKKHSCENCAKSFFSLAELRQH 610
+P TC C + + + A + + E
Sbjct: 161 TKDIRMPTAD---TCGTCHLREFAERESERDTMVWPNGQWPAGRPSHALDYTANIETTVW 217
Query: 611 SPVHSEQKSFVCELCGASFKQRTCLWSHKKWNHEELIYKFECTLCGKKFVKNYSLYEHMK 670
+ + + + C +C + + + +++ E C C N M
Sbjct: 218 ATMPQREVAEGCTMCHTNQNKCDNCHTRHEFSAAESRKPEACATCHSGVDHNNWEAYTMS 277
Query: 671 RHSDVRPYKCD 681
+H + D
Sbjct: 278 KHGKLAEMNRD 288
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 28.7 bits (64), Expect = 7.5
Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 20/109 (18%)
Query: 71 SQSLARHIKCVHLKIKHHWCDICGKSFFAASELKQHSFIHSEQKGFVCDLCGASFKQRSC 130
+ H VH HWC+ C + +G C CG +
Sbjct: 204 PKYEKIHNFKVHTFRGPHWCEYCANFMW-----------GLIAQGVKCADCGLN------ 246
Query: 131 LWSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDIC 179
HK+ + + + L K V + L +K H+ RP D+C
Sbjct: 247 --VHKQ-CSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMC 292
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain,
PRMT3, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: g.37.1.5
Length = 121
Score = 27.6 bits (61), Expect = 7.6
Identities = 10/69 (14%), Positives = 18/69 (26%), Gaps = 12/69 (17%)
Query: 132 WSHKKWNHEELSYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFKLNYDMLR 191
S C C + F + H K H F ++ + +
Sbjct: 2 SSGSSGEPAHGRQHTPCLFCDRLFASAEETFSHCKLE------------HQFNIDSMVHK 49
Query: 192 HKQDVHSNI 200
H + + I
Sbjct: 50 HGLEFYGYI 58
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP
ribose,, gene regulation; HET: ALY OAD; 1.50A
{Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A*
1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Length = 289
Score = 28.5 bits (64), Expect = 8.2
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 647 IYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFK 688
C CGK + + H KCD+CG K
Sbjct: 134 FAHCHCIGCGKVYPPQV-FKSKLAEHPIKDFVKCDVCGELVK 174
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 25.4 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 172 RPYKCDI--CGHGFKLNYDMLRHKQ 194
RPY CD C F N+D++RHK+
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKK 26
Score = 25.4 bits (55), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 676 RPYKCDI--CGHGFKLNYDMLRHKQ 698
RPY CD C F N+D++RHK+
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKK 26
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 25.1 bits (54), Expect = 9.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 705 RPYLCTICSATFKTARALKQHGRTH 729
+PY+C C F AL++H R H
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIH 26
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces
cerevisiae} SCOP: c.31.1.5
Length = 361
Score = 28.4 bits (63), Expect = 9.3
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 647 IYKFECTLCGKKFVKNYSLYEHMKRHSDVRPYKCDICGHGFK 688
C CGK + + H KCD+CG K
Sbjct: 142 FAHCHCIGCGKVYPPQV-FKSKLAEHPIKDFVKCDVCGELVK 182
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.1 bits (62), Expect = 9.6
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 9/34 (26%)
Query: 346 CDVCDKSFVNRAGLRLHKLIHSEERG-FVCDLCG 378
C C + K++ G VC LCG
Sbjct: 24 CPEC--------KVYPPKIVERFSEGDVVCALCG 49
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.325 0.134 0.447
Gapped
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 10,627,749
Number of extensions: 607551
Number of successful extensions: 7531
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6068
Number of HSP's successfully gapped: 2674
Length of query: 734
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 633
Effective length of database: 3,881,772
Effective search space: 2457161676
Effective search space used: 2457161676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (27.7 bits)