RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3661
         (109 letters)



>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
           {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 494

 Score = 40.0 bits (93), Expect = 1e-05
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 1   MRGIGEVQEVIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 60
              + ++   I    Y  G +    G  +P +           P+GV G I  +NFP+ +
Sbjct: 110 NAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLM 168

Query: 61  YGWNAAIAL 69
           + W    AL
Sbjct: 169 FLWKIGPAL 177


>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
           {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
          Length = 494

 Score = 37.7 bits (87), Expect = 9e-05
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 1   MRGIGEVQEVIDICDYAVGLSRTYSGSILPSERPGHVLLENWNPLGVVGIISAFNFPVAV 60
           +  + ++  V+    Y  G +  Y G  +P +           P+GV G I  +NFP+ +
Sbjct: 110 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLM 168

Query: 61  YGWNAAIAL 69
             W    AL
Sbjct: 169 QAWKLGPAL 177


>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 446

 Score = 31.5 bits (70), Expect = 0.013
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 4   IGEVQEVIDICDYAVGLSRTYSGSI---LPSERPGHVLLENWNPLGVVGIISAFNFPVAV 60
             EV  V++  D  +     ++         +     L  +  PLGVV +I A+N+P  +
Sbjct: 59  YEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNL 118

Query: 61  YGWNAAIALPGWQ 73
                  A+    
Sbjct: 119 TIQPMVGAVAAGN 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.140    0.446 

Gapped
Lambda     K      H
   0.267   0.0554    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 429,409
Number of extensions: 18147
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 3
Length of query: 109
Length of database: 2,407,596
Length adjustment: 68
Effective length of query: 41
Effective length of database: 1,473,956
Effective search space: 60432196
Effective search space used: 60432196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.3 bits)