Query psy3667
Match_columns 266
No_of_seqs 217 out of 1394
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 22:32:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3667.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3667hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00014 myosin-A; Provisional 100.0 3.4E-58 7.5E-63 459.9 10.7 231 2-232 511-761 (821)
2 cd01378 MYSc_type_I Myosin mot 100.0 3.2E-57 6.9E-62 447.5 10.6 229 2-231 415-664 (674)
3 cd01380 MYSc_type_V Myosin mot 100.0 2.6E-57 5.7E-62 449.1 9.7 232 2-234 417-685 (691)
4 cd01381 MYSc_type_VII Myosin m 100.0 5.1E-57 1.1E-61 445.5 10.7 232 2-233 411-664 (671)
5 cd01384 MYSc_type_XI Myosin mo 100.0 4.6E-57 1E-61 445.6 10.0 230 2-234 416-664 (674)
6 cd01382 MYSc_type_VI Myosin mo 100.0 4.9E-57 1.1E-61 448.4 9.0 233 2-234 446-710 (717)
7 cd01385 MYSc_type_IX Myosin mo 100.0 7.5E-57 1.6E-61 445.6 9.9 233 2-236 426-685 (692)
8 cd01377 MYSc_type_II Myosin mo 100.0 7.3E-57 1.6E-61 446.1 8.2 232 2-233 423-686 (693)
9 COG5022 Myosin heavy chain [Cy 100.0 1.5E-56 3.1E-61 452.6 9.0 232 2-234 477-734 (1463)
10 cd01383 MYSc_type_VIII Myosin 100.0 1.6E-56 3.4E-61 442.0 8.7 229 2-234 414-671 (677)
11 smart00242 MYSc Myosin. Large 100.0 3.5E-56 7.7E-61 441.2 9.9 230 2-231 418-667 (677)
12 cd01387 MYSc_type_XV Myosin mo 100.0 3.7E-56 8.1E-61 439.7 9.3 231 2-233 410-670 (677)
13 cd00124 MYSc Myosin motor doma 100.0 1.9E-55 4.2E-60 436.6 9.3 229 2-230 411-669 (679)
14 cd01379 MYSc_type_III Myosin m 100.0 1.2E-53 2.5E-58 420.2 9.6 217 2-233 422-646 (653)
15 cd01386 MYSc_type_XVIII Myosin 100.0 1.7E-53 3.6E-58 424.6 9.3 233 2-234 428-761 (767)
16 PF00063 Myosin_head: Myosin h 100.0 1.9E-52 4E-57 417.2 8.7 228 2-229 413-689 (689)
17 KOG0162|consensus 100.0 1.1E-49 2.4E-54 379.2 6.2 224 2-229 432-679 (1106)
18 KOG0164|consensus 100.0 1E-48 2.2E-53 372.3 5.8 227 2-229 424-679 (1001)
19 KOG0161|consensus 100.0 1.2E-47 2.6E-52 402.5 5.8 233 2-234 497-762 (1930)
20 KOG0160|consensus 100.0 3.6E-43 7.8E-48 347.3 6.0 234 2-238 417-666 (862)
21 KOG0163|consensus 100.0 2E-42 4.4E-47 330.4 8.5 234 1-234 499-763 (1259)
22 KOG4229|consensus 99.8 8.6E-20 1.9E-24 185.6 7.6 225 1-227 475-758 (1062)
23 KOG4229|consensus 93.1 0.032 6.8E-07 58.6 0.6 105 119-227 796-900 (1062)
24 KOG0161|consensus 74.9 4 8.6E-05 45.9 4.7 42 76-117 633-674 (1930)
25 COG5022 Myosin heavy chain [Cy 57.8 10 0.00023 41.2 3.6 39 77-115 602-640 (1463)
26 PTZ00014 myosin-A; Provisional 49.1 18 0.00039 37.8 3.6 37 80-116 638-674 (821)
27 cd01382 MYSc_type_VI Myosin mo 44.1 27 0.00058 35.9 3.9 40 77-116 584-623 (717)
28 cd01378 MYSc_type_I Myosin mot 42.0 26 0.00056 35.7 3.4 37 80-116 542-578 (674)
29 cd01386 MYSc_type_XVIII Myosin 39.2 28 0.00061 36.0 3.2 36 80-115 609-644 (767)
30 cd01384 MYSc_type_XI Myosin mo 39.2 32 0.0007 35.1 3.6 38 79-116 541-578 (674)
31 cd01380 MYSc_type_V Myosin mot 39.2 32 0.00069 35.2 3.6 38 79-116 560-597 (691)
32 cd01383 MYSc_type_VIII Myosin 38.2 34 0.00073 34.9 3.6 38 79-116 547-584 (677)
33 cd01385 MYSc_type_IX Myosin mo 34.7 43 0.00092 34.3 3.7 37 80-116 561-597 (692)
34 smart00242 MYSc Myosin. Large 34.5 42 0.00091 34.2 3.6 38 79-116 544-581 (677)
35 cd01381 MYSc_type_VII Myosin m 34.1 37 0.00081 34.6 3.2 37 80-116 539-575 (671)
36 cd01379 MYSc_type_III Myosin m 33.8 43 0.00094 34.0 3.5 37 80-116 525-561 (653)
37 cd01387 MYSc_type_XV Myosin mo 33.8 45 0.00097 34.0 3.7 37 80-116 547-583 (677)
38 cd01377 MYSc_type_II Myosin mo 33.2 46 0.001 34.0 3.7 37 80-116 562-598 (693)
39 cd00124 MYSc Myosin motor doma 31.5 51 0.0011 33.6 3.7 40 77-116 546-585 (679)
40 KOG0164|consensus 20.5 1E+02 0.0023 31.7 3.4 36 80-115 559-594 (1001)
No 1
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=3.4e-58 Score=459.90 Aligned_cols=231 Identities=21% Similarity=0.323 Sum_probs=212.2
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||| +|.|||+||||||++|++||++|+++|++.+++|+.|..|+...+..|+|+||||+|.
T Consensus 511 EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~V~ 590 (821)
T PTZ00014 511 EGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCLAPGGTDEKFVSSCNTNLKNNPKYKPAKVDSNKNFVIKHTIGDIQ 590 (821)
T ss_pred ccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCCCccCCCCCCCCceEEEEeceeee
Confidence 8999999999999 999999 5689999999999999999999999999999999999988765678999999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc-----------cCCCcchHHHHHHHHhccCCceeeeccCcc
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK-----------RAGIPRVLGRLMVTLRNTNPNFVRCIIPNH 144 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~-----------~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~ 144 (266)
|++.||++||. + .+++.+|++|+++|++.||+.... .++|+.||+.||++|++|+||||||||||+
T Consensus 591 Y~~~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~k~~tv~s~Fk~qL~~Lm~~L~~t~phfIRCIKPN~ 670 (821)
T PTZ00014 591 YCASGFLFKNKDVLRPELVEVVKASPNPLVRDLFEGVEVEKGKLAKGQLIGSQFLNQLDSLMSLINSTEPHFIRCIKPNE 670 (821)
T ss_pred eccCcHHHhccccchHHHHHHHHhCccHHHHHHhcccccccccccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCcCc
Confidence 99999999973 3 567889999999999999975321 135889999999999999999999999999
Q ss_pred ccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC---cCchHHHHHHHHcCCCCCcEEe
Q psy3667 145 EKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS---EFDSGVVEVFSALCLEFGVHSA 221 (266)
Q Consensus 145 ~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~---~~~d~~~~ll~~l~l~~~~~~~ 221 (266)
.+.|+.||...|++||||+||+|++||+++|||+|++|.+|+.||++|.+...+. +.++.|+.||+.++++.++|++
T Consensus 671 ~k~p~~fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~~rY~~L~~~~~~~~~~d~k~~~~~il~~~~l~~~~~~i 750 (821)
T PTZ00014 671 NKKPLDWNSSKVLIQLHSLSILEALQLRQLGFSYRRTFAEFLSQFKYLDLAVSNDSSLDPKEKAEKLLERSGLPKDSYAI 750 (821)
T ss_pred ccCccccchHhHHHHhhhhhHHHHHHHHhcCCcccccHHHHHHHHHhcCcccccCCCCCHHHHHHHHHHHcCCCcccEEe
Confidence 9999999999999999999999999999999999999999999999998876654 3678899999999999999999
Q ss_pred cccceeCCccc
Q psy3667 222 SSSGVCSPAVW 232 (266)
Q Consensus 222 G~t~VF~~~~w 232 (266)
|+||||++.+-
T Consensus 751 GkTKVFlr~~~ 761 (821)
T PTZ00014 751 GKTMVFLKKDA 761 (821)
T ss_pred cCCeEEEcCcH
Confidence 99999998764
No 2
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=3.2e-57 Score=447.48 Aligned_cols=229 Identities=27% Similarity=0.448 Sum_probs=209.6
Q ss_pred CCCcccccchhhh--HHHHhcC--cccccccccccccCC-CCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFS--PMGIMALLDEECWFP-KATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGK 76 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiek--p~Gll~lLDee~~~p-~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~ 76 (266)
|||.|+.|+|.|| |+||||+ |.|||++|||||++| ++||++|++||++.+++|+.+..++. .+..|+|+||||+
T Consensus 415 EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~~p~~~tD~~~~~kl~~~~~~~~~~~~~~~-~~~~F~I~HyAG~ 493 (674)
T cd01378 415 EGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCATPHEGTDQTFLEKLNKKFSSHPHSDHFSS-GSDEFRIKHYAGD 493 (674)
T ss_pred cCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHcCCCCCChHHHHHHHHHHhccCCCCCCCCC-CCCcEEEEEecee
Confidence 8999999999999 9999995 789999999999999 99999999999999999988766554 5779999999999
Q ss_pred ccccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc----------cCCCcchHHHHHHHHhccCCceeeeccCc
Q psy3667 77 GMFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK----------RAGIPRVLGRLMVTLRNTNPNFVRCIIPN 143 (266)
Q Consensus 77 v~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~----------~~~~~~sL~~L~~~L~~t~~~fVrCIKPN 143 (266)
|.|++.||++||. + .+++.+|++|++++++.+|+.... .++|+.+|+.||++|++|+||||||||||
T Consensus 494 V~Y~~~gfleKNrD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~tv~~~fk~qL~~Lm~~L~~t~phfIRCIKPN 573 (674)
T cd01378 494 VTYSVEGFCDKNKDTLFKDLIELMQSSSNPFLRSLFPEKSDADSKKRPTTAGFKIKTSANALVETLMKCTPHYIRCIKPN 573 (674)
T ss_pred eeecCcCHHHhhcchhhHHHHHHHHhCchHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHccCCeEEEEECCC
Confidence 9999999999974 3 567889999999999999974321 13588999999999999999999999999
Q ss_pred cccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC---CcCchHHHHHHHHcCCCCCcEE
Q psy3667 144 HEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR---SEFDSGVVEVFSALCLEFGVHS 220 (266)
Q Consensus 144 ~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~---~~~~d~~~~ll~~l~l~~~~~~ 220 (266)
+.+.|+.||.+.|++||||+||+|++||+|.|||+|++|.+|++||+.|++..++ .+.++.|+.||+.++++.++|+
T Consensus 574 ~~k~p~~Fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~~~~F~~rY~~L~~~~~~~~~~~~k~~~~~iL~~~~~~~~~~~ 653 (674)
T cd01378 574 ETKSPNDFDESRVLHQVKYLGLLENVRVRRAGFAYRQTFDKFLQRYKLLSPKTWPTWPGDAKSGVEVILKDLNIDPEEYQ 653 (674)
T ss_pred ccCCchhcCHHHHHHHHHhcChHHHHHHHhcCCCccccHHHHHHHHHHhCcccccccCCCHHHHHHHHHHHcCCCcccEE
Confidence 9999999999999999999999999999999999999999999999999987644 3467889999999999999999
Q ss_pred ecccceeCCcc
Q psy3667 221 ASSSGVCSPAV 231 (266)
Q Consensus 221 ~G~t~VF~~~~ 231 (266)
+|+||||++.+
T Consensus 654 ~GkTkVFlr~~ 664 (674)
T cd01378 654 MGKTKIFIRNP 664 (674)
T ss_pred ecCceEEEeCc
Confidence 99999999986
No 3
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=2.6e-57 Score=449.13 Aligned_cols=232 Identities=28% Similarity=0.436 Sum_probs=211.5
Q ss_pred CCCcccccchhhh--HHHHhcCcccccccccccccCCCCChHHHHHHHHHhcc--CCCcccccCCCCccceEEEeccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFSPMGIMALLDEECWFPKATDRSFVEKLVQSHS--QHAKFKKTDFRGVADFAIVHYAGKG 77 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiekp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~--~~~~f~~~~~~~~~~F~I~HyAG~v 77 (266)
|||.|+.|+|.|| ||||||+|.|||++|||||++|++||++|++||++.++ +|+.|.+|+. ....|+|+||||+|
T Consensus 417 EgI~~~~i~f~DN~~~ldLie~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~-~~~~F~I~HyAG~V 495 (691)
T cd01380 417 EGIEWTFIDFYDNQPCIDLIESKLGILSLLDEECRLPKGSDESWAQKLYNKLPKKKNPHFEKPRF-GQTSFTVKHFADDV 495 (691)
T ss_pred cCCCCccccCCCCHHHHHHHhCCCchHHHhHHhhcCCCCChHHHHHHHHHHhcccCCCCccCCCC-CCCeeEEEEccCCc
Confidence 8999999999999 99999999999999999999999999999999999998 8999988875 46789999999999
Q ss_pred cccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc----------------------------cCCCcchHHHHH
Q psy3667 78 MFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK----------------------------RAGIPRVLGRLM 126 (266)
Q Consensus 78 ~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~----------------------------~~~~~~sL~~L~ 126 (266)
.|++.||++||. + .+++.+|++|+++|++.+|+.... .++|+.+|+.||
T Consensus 496 ~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~ 575 (691)
T cd01380 496 EYDVDGFLEKNRDTVSDEHLDVLKASKNPFLKEVLDAAELASSSSSSAKSKPAAKRPPKRAKQHKPTVGSQFKSSLIELM 575 (691)
T ss_pred ccccccHHHhccccccHHHHHHHHhCccHHHHHHhhhhcccccccccccccccccccccccccCCCcHHHHHHHHHHHHH
Confidence 999999999974 3 567888999999999999864210 124788999999
Q ss_pred HHHhccCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC--CcCchH
Q psy3667 127 VTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR--SEFDSG 204 (266)
Q Consensus 127 ~~L~~t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~--~~~~d~ 204 (266)
++|++|+||||||||||+.+.|+.||.+.|++||||+||+|++||+|+|||+|++|.+|+.||+.|++.... .+.++.
T Consensus 576 ~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~~F~~ry~~L~~~~~~~~~~~k~~ 655 (691)
T cd01380 576 STLNSTNPHYIRCIKPNDEKKPFKFEPKRVLQQLRACGVLETIRISAAGFPSRWTYEEFAQRYRVLVPSKELWKSDPKQL 655 (691)
T ss_pred HHHhccCCeEEEEeCCCcccCcCccCHHHHHHHHHHhchHHHHHHHhccCCccccHHHHHHHHHHhCccccccCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987662 346788
Q ss_pred HHHHHHHcCCCCCcEEecccceeCCccccC
Q psy3667 205 VVEVFSALCLEFGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 205 ~~~ll~~l~l~~~~~~~G~t~VF~~~~w~~ 234 (266)
|+.||+.+.++.++|++|+||||++.+-..
T Consensus 656 ~~~iL~~~~~~~~~~~~G~tkVFlk~~~~~ 685 (691)
T cd01380 656 CENILTKVIEDEDKYQFGKTKIFFRAGQVA 685 (691)
T ss_pred HHHHHHHhCCCcccEEecCceEEECcCHHH
Confidence 999999999999999999999999876543
No 4
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=5.1e-57 Score=445.50 Aligned_cols=232 Identities=28% Similarity=0.418 Sum_probs=212.0
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||| +|.|||++|||||++|++||++|++||++.+++|+.|..|+...+..|+|+||||+|.
T Consensus 411 EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~ 490 (671)
T cd01381 411 EHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESKFPKGTDQTMLEKLHSQHGLHSNYLKPKSTQETQFGINHFAGVVF 490 (671)
T ss_pred cCCCCCccCccCcHHHHHHHhcCCCCcceechHhhcCCCCCHHHHHHHHHHHhcCCCCcccCCCCCCCceEEEEecceEe
Confidence 8999999999999 999999 6789999999999999999999999999999999999988766678999999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCcc-------c-----cCCCcchHHHHHHHHhccCCceeeeccCc
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHE-------K-----RAGIPRVLGRLMVTLRNTNPNFVRCIIPN 143 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~-------~-----~~~~~~sL~~L~~~L~~t~~~fVrCIKPN 143 (266)
|++.||++||. + .+++.+|++|++.+++.+|+... + .++|+.||+.||++|++|+||||||||||
T Consensus 491 Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~k~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN 570 (671)
T cd01381 491 YDTRGFLEKNRDTFSGDLSQLVQSSKNKFLKQIFQADVEMGAETRKKKPTLSSQFRRSLDLLMRTLSSCQPFFIRCIKPN 570 (671)
T ss_pred eccCCHHHhccchhhHHHHHHHHhChHHHHHHHhcccccccccccccCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCcc
Confidence 99999999974 3 56788999999999999997532 1 13588999999999999999999999999
Q ss_pred cccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC----cCchHHHHHHHHcCCCCCcE
Q psy3667 144 HEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS----EFDSGVVEVFSALCLEFGVH 219 (266)
Q Consensus 144 ~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~----~~~d~~~~ll~~l~l~~~~~ 219 (266)
+.+.|+.||...|++||||+||+|++||+|+|||+|++|.+|+.||+.|++..++. +..+.++.+++.+.++.++|
T Consensus 571 ~~k~~~~fd~~~V~~QLr~~Gvle~iri~r~Gyp~r~~~~~F~~rY~~L~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~ 650 (671)
T cd01381 571 EYKEPMVFDRELCVRQLRYSGMMETIRIRRAGYPIRHTFREFVERYRVLVPGVKPAYKQDCLAGLAQRICEAVLLADDDW 650 (671)
T ss_pred hhhccCccChHHHHHHHHhcchHHHHHHHHcCcCceecHHHHHHHHHHhCcccccccccccHHHHHHHHHHHcCCCcccE
Confidence 99999999999999999999999999999999999999999999999999877653 24567899999999999999
Q ss_pred EecccceeCCcccc
Q psy3667 220 SASSSGVCSPAVWP 233 (266)
Q Consensus 220 ~~G~t~VF~~~~w~ 233 (266)
++|+||||++.+-.
T Consensus 651 ~~G~TkVFlr~~~~ 664 (671)
T cd01381 651 QLGKTKVFLKDHHD 664 (671)
T ss_pred EeccceEEECcCHH
Confidence 99999999886543
No 5
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=4.6e-57 Score=445.60 Aligned_cols=230 Identities=31% Similarity=0.512 Sum_probs=209.7
Q ss_pred CCCcccccchhhh--HHHHhcC-cccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFS-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiek-p~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| ||||||+ |.|||++|||||++|++||++|++||++.+++|+.|.+|+. .+..|+|+||||+|.
T Consensus 416 EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~-~~~~F~I~HyAG~V~ 494 (674)
T cd01384 416 EEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKL-SRTAFTIDHYAGDVT 494 (674)
T ss_pred cCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCCCCCC-CCCeeEEEEecceee
Confidence 8999999999999 9999996 78999999999999999999999999999999999999875 467999999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc-----------cCCCcchHHHHHHHHhccCCceeeeccCcc
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK-----------RAGIPRVLGRLMVTLRNTNPNFVRCIIPNH 144 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~-----------~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~ 144 (266)
|++.||++||. + .+++.+|++|++++++.+|+.... .++|+.+|++||++|++|+||||||||||+
T Consensus 495 Y~v~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~k~~tv~~~fk~~L~~L~~~L~~t~~hfIRCIKPN~ 574 (674)
T cd01384 495 YQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSKFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNN 574 (674)
T ss_pred ecCCCHHHhcCCcccHHHHHHHHhCchHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHhccCCeEEEEeCCCc
Confidence 99999999974 3 577889999999999999975321 135889999999999999999999999999
Q ss_pred ccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCc--CchHHHHHHHHcCCCCCcEEec
Q psy3667 145 EKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSE--FDSGVVEVFSALCLEFGVHSAS 222 (266)
Q Consensus 145 ~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~--~~d~~~~ll~~l~l~~~~~~~G 222 (266)
.+.|+.||...|++||||+||+|++||+|+|||+|++|.+|+.||+.|++..++.. .++.|+.||+.++++ .|++|
T Consensus 575 ~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~~ry~~L~~~~~~~~~~~~~~~~~il~~~~~~--~~~~G 652 (674)
T cd01384 575 VLKPGIFENENVLQQLRCGGVLEAIRISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLK--GYQIG 652 (674)
T ss_pred ccCCCccCHHHHHHHHHHcchHHHHHHHhcCCCccccHHHHHHHHHHhCcccccCCCcHHHHHHHHHHhCCCC--CEEec
Confidence 99999999999999999999999999999999999999999999999998776543 567889999998774 79999
Q ss_pred ccceeCCccccC
Q psy3667 223 SSGVCSPAVWPA 234 (266)
Q Consensus 223 ~t~VF~~~~w~~ 234 (266)
+||||++.+-..
T Consensus 653 ktkVFlr~~~~~ 664 (674)
T cd01384 653 KTKVFLRAGQMA 664 (674)
T ss_pred CeeEEEcCCHHH
Confidence 999999887543
No 6
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=4.9e-57 Score=448.36 Aligned_cols=233 Identities=23% Similarity=0.354 Sum_probs=210.5
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCC---------CccceE
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFR---------GVADFA 69 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~---------~~~~F~ 69 (266)
|||+|++|+|.|| |||||| +|.|||++|||||++|++||++|+++|++.+++|+.|..|+.. ....|+
T Consensus 446 EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ 525 (717)
T cd01382 446 EGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENRLPQPSDQHFTSVVHQKHKDHFRLTIPRKSKLAVHRNLRDDEGFI 525 (717)
T ss_pred cCCCCccccccccHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHhcCCcCccCCCccccccccccCCCCCEE
Confidence 8999999999999 999999 5679999999999999999999999999999999888766421 245899
Q ss_pred EEeccccccccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc----------------cCCCcchHHHHHHHHh
Q psy3667 70 IVHYAGKGMFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK----------------RAGIPRVLGRLMVTLR 130 (266)
Q Consensus 70 I~HyAG~v~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~----------------~~~~~~sL~~L~~~L~ 130 (266)
|+||||+|.|++.||++||. + .+++.+|++|++++++.+|+.... .++|+.||+.||++|+
T Consensus 526 I~HyAG~V~Y~v~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~k~~~~tv~~~fk~qL~~Lm~~L~ 605 (717)
T cd01382 526 IRHFAGAVCYETTQFVEKNNDALHMSLESLICESKDKFLRSLFESSTNNNDTKQKAGKLSFISVGNKFKTQLNLLLEKLR 605 (717)
T ss_pred EEecceeEeecCCChHHhcCccccHHHHHHHHhCchHHHHHHhccccccccccccccCccCccHHHHHHHHHHHHHHHHh
Confidence 99999999999999999974 3 567888999999999999964320 1257889999999999
Q ss_pred ccCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC-cCchHHHHHH
Q psy3667 131 NTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS-EFDSGVVEVF 209 (266)
Q Consensus 131 ~t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~-~~~d~~~~ll 209 (266)
+|+||||||||||+.+.|+.||...|++||||+||+|++||+|+|||+|++|.+|++||+.|++..... +.++.|++||
T Consensus 606 ~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~f~~F~~ry~~l~~~~~~~~~~~~~~~~iL 685 (717)
T cd01382 606 STGSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPPKLVRLDPRLFCKALF 685 (717)
T ss_pred ccCCeeeeeeCCCcccCCCCCChHHHHHHHHhcchHHHHHHHHccCchhhhHHHHHHHHHHhCCcccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998866654 4678899999
Q ss_pred HHcCCCCCcEEecccceeCCccccC
Q psy3667 210 SALCLEFGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 210 ~~l~l~~~~~~~G~t~VF~~~~w~~ 234 (266)
+.+++++.+|++|+||||+|++..+
T Consensus 686 ~~~~~~~~~~~~GkTKVFlr~g~~~ 710 (717)
T cd01382 686 KALGLNENDYKFGLTKVFFRPGKFA 710 (717)
T ss_pred HHcCCCcccEEecceeEEecccHHH
Confidence 9999999999999999999988765
No 7
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=7.5e-57 Score=445.58 Aligned_cols=233 Identities=27% Similarity=0.400 Sum_probs=209.5
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||| +|.|||++|||||++|++||++|++++++.+++++.|.+|+. ....|+|+||||+|.
T Consensus 426 EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~~p~~td~~~l~kl~~~~~~~~~~~~~~~-~~~~F~I~HyAG~V~ 504 (692)
T cd01385 426 EGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESNFPHATSQTLLAKFNQQHKDNKYYEGPQV-KEPAFIIQHYAGKVK 504 (692)
T ss_pred cCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhcCCCCCHHHHHHHHHHHhCCCCCccCCCC-CCCeEEEEEecceee
Confidence 8999999999999 999999 578999999999999999999999999999999999988764 466899999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCcc--------------------ccCCCcchHHHHHHHHhccCCc
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHE--------------------KRAGIPRVLGRLMVTLRNTNPN 135 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~--------------------~~~~~~~sL~~L~~~L~~t~~~ 135 (266)
|++.||++||. + .+++.+|++|++++++.+|+... ..++|+.+|++||++|++|+||
T Consensus 505 Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~tV~~~f~~~L~~L~~~L~~t~~h 584 (692)
T cd01385 505 YQIKDFREKNMDLMRQDIVALLKGSDSSYVRELIGMDPVAVFRWAVLRAAFRAMAAPSVSAQFQTSLNKLMETLGKAEPF 584 (692)
T ss_pred ecCCCHHHhccccccHHHHHHHHhCccHHHHHHhccCcccccccccccccccCccCCcHHHHHHHHHHHHHHHHhccCCe
Confidence 99999999974 3 57788999999999999986431 0124788999999999999999
Q ss_pred eeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCcCchHHHHHHHHcCCC
Q psy3667 136 FVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSEFDSGVVEVFSALCLE 215 (266)
Q Consensus 136 fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~~d~~~~ll~~l~l~ 215 (266)
||||||||+.+.|+.||...|++||||+||+|++||++.|||+|++|.+|++||+.|+|.... ...+.|+.||+.++++
T Consensus 585 fIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlE~irirr~Gyp~R~~~~~F~~rY~~L~~~~~~-~~~~~~~~il~~~~~~ 663 (692)
T cd01385 585 FIRCIKSNAEKIENCFDDELVLRQLRYTGMLETVRIRRAGYSVRYTYQDFTQQYRILLPKGAQ-SCREDISTLLSKMKID 663 (692)
T ss_pred EEEEeCCCCccCcCccCHHHHHHHHHhhchHHHHHHHhccCCccccHHHHHHHHHHhCccccc-chHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999886543 3467899999999999
Q ss_pred CCcEEecccceeCCc-cccCCC
Q psy3667 216 FGVHSASSSGVCSPA-VWPAPF 236 (266)
Q Consensus 216 ~~~~~~G~t~VF~~~-~w~~~~ 236 (266)
+++|++|+||||+++ .|..++
T Consensus 664 ~~~~~iGkTkVFlr~~~~~~Le 685 (692)
T cd01385 664 KRNYQIGKTKIFMRETEKQALD 685 (692)
T ss_pred cccEEeeCceEEEcccHHHHHH
Confidence 999999999999774 444333
No 8
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=7.3e-57 Score=446.08 Aligned_cols=232 Identities=40% Similarity=0.626 Sum_probs=208.5
Q ss_pred CCCcccccchh-hh--HHHHhcC-cccccccccccccCCCCChHHHHHHHHHhccCCCccc-ccCCCCccceEEEecccc
Q psy3667 2 DSIGMSCIKYI-LF--FFNLLFS-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFK-KTDFRGVADFAIVHYAGK 76 (266)
Q Consensus 2 egi~~~~i~~~-dn--~idLiek-p~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~-~~~~~~~~~F~I~HyAG~ 76 (266)
|||.|+.|+|. || ||||||+ |.|||++|||||++|++||++|+++|++.+++++.|. .++...+..|+|+||||+
T Consensus 423 EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~~~~~tD~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~ 502 (693)
T cd01377 423 EGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECVFPKATDKTFVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGT 502 (693)
T ss_pred hCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhcCCCCCHHHHHHHHHHHhcCCCcccccCCCCCCCcEEEEeecee
Confidence 89999999995 88 9999996 8899999999999999999999999999999998872 233345779999999999
Q ss_pred ccccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc---------------------cCCCcchHHHHHHHHhcc
Q psy3667 77 GMFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK---------------------RAGIPRVLGRLMVTLRNT 132 (266)
Q Consensus 77 v~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~---------------------~~~~~~sL~~L~~~L~~t 132 (266)
|.|++.||++||. + .+++.+|++|+++|++.+|+.... .++|+.||++||++|++|
T Consensus 503 V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~tv~~~F~~qL~~L~~~L~~t 582 (693)
T cd01377 503 VDYNIDGWLEKNKDPLNDNVVGLLKKSSDKLVAELFKDYAEASGDGGGGGGKKKKGGSFRTVSQLYKEQLNKLMTTLRST 582 (693)
T ss_pred EeeccccHHHhccccccHHHHHHHHhCchHHHHHHhhhhcccccccccccCCCCcCCccccHHHHHHHHHHHHHHHHhcc
Confidence 9999999999974 3 577889999999999999864210 124788999999999999
Q ss_pred CCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC---cCchHHHHHH
Q psy3667 133 NPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS---EFDSGVVEVF 209 (266)
Q Consensus 133 ~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~---~~~d~~~~ll 209 (266)
+||||||||||+.+.|+.||.+.|++||||+||+|++||+++|||+|++|.+|++||++|.+..++. +.++.|+.||
T Consensus 583 ~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlEtvrirr~Gyp~R~~f~~F~~rY~~L~~~~~~~~~~d~k~~~~~iL 662 (693)
T cd01377 583 NPHFVRCIIPNEEKKPGKLDAHLVLDQLRCNGVLEGIRICRKGFPNRILYAEFRQRYEILAPNAIPKGFMDSKKASEKIL 662 (693)
T ss_pred CCeEEEEeCcCccCCCCccCHHHHHHHHHhcchHHHHHHHHcCCCccccHHHHHHHHHHhCcccccccCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999877543 3577889999
Q ss_pred HHcCCCCCcEEecccceeCCcccc
Q psy3667 210 SALCLEFGVHSASSSGVCSPAVWP 233 (266)
Q Consensus 210 ~~l~l~~~~~~~G~t~VF~~~~w~ 233 (266)
+.++++..+|++|+||||++.+-.
T Consensus 663 ~~~~~~~~~~~~G~TKVFlk~~~~ 686 (693)
T cd01377 663 KSLELDPEQYRFGHTKVFFRAGVL 686 (693)
T ss_pred HhcCCCcccEEecCCeEeECccHH
Confidence 999999999999999999987643
No 9
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=1.5e-56 Score=452.60 Aligned_cols=232 Identities=35% Similarity=0.556 Sum_probs=208.7
Q ss_pred CCCcccccchhhh--HHHHhcC--cccccccccccccCCCCChHHHHHHHHHhcc--CCCcccccCCCCccceEEEeccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFS--PMGIMALLDEECWFPKATDRSFVEKLVQSHS--QHAKFKKTDFRGVADFAIVHYAG 75 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiek--p~Gll~lLDee~~~p~~sD~~fl~kl~~~~~--~~~~f~~~~~~~~~~F~I~HyAG 75 (266)
|||.|..|+|+|| ||||||+ |.|||++|||||+.|.+||++|.++|.+.+. +++.|.+++. ....|+|+||||
T Consensus 477 E~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf-~~~~FvvkHYAg 555 (1463)
T COG5022 477 EGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRF-RDNKFVVKHYAG 555 (1463)
T ss_pred hcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCcccccccc-CCCceEEEeecc
Confidence 8999999999999 9999998 9999999999999999999999999999986 4566777665 456899999999
Q ss_pred cccccchhHHHHH--HH-HHHHHHHhccCccccccccCCcc---cc-------CCCcchHHHHHHHHhccCCceeeeccC
Q psy3667 76 KGMFRTVSQLYKE--QL-TKLMVTLRNTNPNFVRCIIPNHE---KR-------AGIPRVLGRLMVTLRNTNPNFVRCIIP 142 (266)
Q Consensus 76 ~v~Y~~~~~l~k~--~l-~~l~~~L~~s~~~fv~~lf~~~~---~~-------~~~~~sL~~L~~~L~~t~~~fVrCIKP 142 (266)
+|.|++.||++|| .+ ..++.++..|.+.|+..||+... ++ ..|+.||.+||.+|++|+|||||||||
T Consensus 556 DVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkP 635 (1463)
T COG5022 556 DVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKP 635 (1463)
T ss_pred cceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhccccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCC
Confidence 9999999999996 45 45789999999999999998432 11 236789999999999999999999999
Q ss_pred ccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC-------CcCchHHHHHHHHcCCC
Q psy3667 143 NHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR-------SEFDSGVVEVFSALCLE 215 (266)
Q Consensus 143 N~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~-------~~~~d~~~~ll~~l~l~ 215 (266)
|..|.|+.||..+|++||||+||+|+|||+++|||.|++|+||+.||++|.|...- ++.++.|..||..+.+|
T Consensus 636 N~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id 715 (1463)
T COG5022 636 NEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVID 715 (1463)
T ss_pred CcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999885332 22467889999999999
Q ss_pred CCcEEecccceeCCccccC
Q psy3667 216 FGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 216 ~~~~~~G~t~VF~~~~w~~ 234 (266)
...|++|.||||++++.+.
T Consensus 716 ~~~YqiG~TKvFfKagvL~ 734 (1463)
T COG5022 716 SSKYQIGNTKVFFKAGVLA 734 (1463)
T ss_pred hhheeccceeEEeeCchHH
Confidence 9999999999999999665
No 10
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=1.6e-56 Score=441.98 Aligned_cols=229 Identities=28% Similarity=0.426 Sum_probs=203.9
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||| +|.|||+||||||++|++||++|++||++++++|+.|..++ +..|+|+||||+|.
T Consensus 414 EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~~p~~tD~~f~~kl~~~~~~~~~~~~~~---~~~F~I~HyAG~V~ 490 (677)
T cd01383 414 DGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLKTNSCFRGER---GGAFTVRHYAGEVT 490 (677)
T ss_pred cCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHcCCCCCHHHHHHHHHHHhCCCCCCCCCC---CCceEEEEecccee
Confidence 8999999999999 999999 57899999999999999999999999999999999997764 56899999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCc----------------------cccCCCcchHHHHHHHHhccC
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNH----------------------EKRAGIPRVLGRLMVTLRNTN 133 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~----------------------~~~~~~~~sL~~L~~~L~~t~ 133 (266)
|++.||++||. + .+++.+|++|++.++. +|... ...++|+.||+.||++|++|+
T Consensus 491 Y~v~gfleKNrD~l~~~~~~ll~~S~~~~~~-~f~~~~~~~s~~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~ 569 (677)
T cd01383 491 YDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQ-LFASSMLIQSPVVGPLYVASAADSQKLSVGTKFKGQLFKLMQQLENTT 569 (677)
T ss_pred ecCCChHHhccccccHHHHHHHHhCchHHHH-HHHhhhhccccccccccccccccccCcchHHHHHHHHHHHHHHHhCCC
Confidence 99999999974 3 5678888888887655 33210 011357889999999999999
Q ss_pred CceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC-cCchHHHHHHHHc
Q psy3667 134 PNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS-EFDSGVVEVFSAL 212 (266)
Q Consensus 134 ~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~-~~~d~~~~ll~~l 212 (266)
||||||||||+.+.|+.||.+.|++||||+||+|++||+|+|||+|++|.+|++||+.|++..+.. +.++.+++||+.+
T Consensus 570 phfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~~F~~rY~~L~~~~~~~~~~~~~~~~il~~~ 649 (677)
T cd01383 570 PHFIRCIKPNNKQLPGIYEQGLVLQQLRCCGVLEVVRISRSGYPTRMTHQEFARRYGFLLLENIASQDPLSVSVAILQQF 649 (677)
T ss_pred CeEEEEECcccccCcCccchhhhHHHhhhccHHHHHHHHhcCCCccccHHHHHHHHHHhCccccCCCCHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999877654 3556779999999
Q ss_pred CCCCCcEEecccceeCCccccC
Q psy3667 213 CLEFGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 213 ~l~~~~~~~G~t~VF~~~~w~~ 234 (266)
++++++|++|+||||+|.+-..
T Consensus 650 ~~~~~~~~~GkTKVFlr~~~~~ 671 (677)
T cd01383 650 NILPEMYQVGYTKLFFRTGQIG 671 (677)
T ss_pred CCCcccEEeccceEEecCcHHH
Confidence 9999999999999999876543
No 11
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=3.5e-56 Score=441.17 Aligned_cols=230 Identities=36% Similarity=0.594 Sum_probs=211.7
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||+ +|.|||++|||||++|++||++|+++|++.+++++.|.+|+...+..|+|+||||+|.
T Consensus 418 EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~~~~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~H~AG~V~ 497 (677)
T smart00242 418 EGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECRFPKATDQTFLEKLNQTHEKHPHFSKPRKKGRTEFIIKHYAGDVT 497 (677)
T ss_pred cCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCccCCCCCCCCeEEEEecceeEe
Confidence 8999999999999 999999 5689999999999999999999999999999999999998666788999999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc-----------cCCCcchHHHHHHHHhccCCceeeeccCcc
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK-----------RAGIPRVLGRLMVTLRNTNPNFVRCIIPNH 144 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~-----------~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~ 144 (266)
|++.||++||. + .+++.+|++|++.+++.+|+.... .++|+.+|+.||++|++|+||||||||||+
T Consensus 498 Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~tv~~~fk~~L~~L~~~l~~t~~hfIRCIKPN~ 577 (677)
T smart00242 498 YDVTGFLEKNKDTLFKDLIELLQSSKNPLIASLFPSGESNAGSKKRFRTVGSQFKESLNKLMDTLNSTNPHFIRCIKPNE 577 (677)
T ss_pred ecCccHHHHccchhhHHHHHHHHhCCcHHHHHHhccccccccccCCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCc
Confidence 99999999974 3 567889999999999999975421 135789999999999999999999999999
Q ss_pred ccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC---cCchHHHHHHHHcCCCCCcEEe
Q psy3667 145 EKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS---EFDSGVVEVFSALCLEFGVHSA 221 (266)
Q Consensus 145 ~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~---~~~d~~~~ll~~l~l~~~~~~~ 221 (266)
.+.|+.||.+.|++||||+||+|++||++.|||+|++|.+|+.||+.|.+..++. +.++.|+.||+.++++..+|++
T Consensus 578 ~k~~~~Fd~~~V~~QLr~~Gvle~iri~r~Gyp~r~~~~~F~~ry~~L~~~~~~~~~~~~k~~~~~iL~~~~~~~~~~~i 657 (677)
T smart00242 578 EKKPGDFDSSLVLHQLRYLGVLETIRIRRAGFPYRLPFDEFLQRYRVLLPDTWPPWGGDAKEACEALLQSLGLDEDEYQL 657 (677)
T ss_pred ccCcccccHHHHHHHHHhcccHHHHHHHHccccceecHHHHHHHHHHhCcccccccCCCHHHHHHHHHHhcCCCcccEEe
Confidence 9999999999999999999999999999999999999999999999999876654 2578999999999999999999
Q ss_pred cccceeCCcc
Q psy3667 222 SSSGVCSPAV 231 (266)
Q Consensus 222 G~t~VF~~~~ 231 (266)
|+||||++.+
T Consensus 658 GkTkVFlk~~ 667 (677)
T smart00242 658 GKTKVFLRPG 667 (677)
T ss_pred cCceEeECcc
Confidence 9999997743
No 12
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=3.7e-56 Score=439.71 Aligned_cols=231 Identities=28% Similarity=0.464 Sum_probs=206.5
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||| +|.|||+||||||++|++||++|++|++..+++++.|.+|+. ....|+|+||||+|.
T Consensus 410 EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~-~~~~F~I~HyAG~V~ 488 (677)
T cd01387 410 EQLDWTEIAFADNQPVINLISLKPYGILRILDDQCCFPQATDHTFLQKCHYHHGANPLYSKPKM-PLPEFTIKHYAGKVT 488 (677)
T ss_pred cCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhcCCCCchHHHHHHHHHhccCCccccCCCC-CCCeeEEEEeCceee
Confidence 8999999999999 999999 678999999999999999999999999999999999988865 356899999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCcc----------------------ccCCCcchHHHHHHHHhccC
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHE----------------------KRAGIPRVLGRLMVTLRNTN 133 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~----------------------~~~~~~~sL~~L~~~L~~t~ 133 (266)
|++.||++||. + .+++.+|.+|++.+++.+|+... ..++|+.+|+.||++|++|+
T Consensus 489 Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~s~~~~~~~~~tv~~~f~~sL~~L~~~l~~t~ 568 (677)
T cd01387 489 YQVHKFLDKNHDQVRQDVLDLFVSSRTRVVAHLFSSHAAQRAPKRLGKSSSGTRLYKAHTVAAKFQQSLLDLVEKMERCN 568 (677)
T ss_pred ecCCChHHhccchhhHHHHHHHHhCCcHHHHHHHhhhhcccccccccCCCccccccCCCcHHHHHHHHHHHHHHHHhcCC
Confidence 99999999974 3 56788899999999999985320 01247789999999999999
Q ss_pred CceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCc-CchH-HHHHHHH
Q psy3667 134 PNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSE-FDSG-VVEVFSA 211 (266)
Q Consensus 134 ~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~-~~d~-~~~ll~~ 211 (266)
||||||||||+.+.|+.||.+.|++||||+||+|++||+|+|||+|++|.+|+.||++|.+...... ..+. +++++..
T Consensus 569 phfIRCIKPN~~k~~~~Fd~~~V~~QLr~~GvlE~vri~r~Gyp~r~~~~~F~~rY~~L~~~~~~~~~~~~~~~~~ll~~ 648 (677)
T cd01387 569 PLFVRCLKPNHKKEPGLFEPDVVMAQLRYSGVLETVRIRKEGFPVRLPFQHFIDRYRCLVALKLARPAPGDMCVSELSRL 648 (677)
T ss_pred CeEEEEECCCCcCCccccChHHHHHHHHHhchHHHHHHHHccCCccccHHHHHHHHHHhCcccccCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988755433 3333 4789999
Q ss_pred cCCCCCcEEecccceeCCcccc
Q psy3667 212 LCLEFGVHSASSSGVCSPAVWP 233 (266)
Q Consensus 212 l~l~~~~~~~G~t~VF~~~~w~ 233 (266)
+++++++|++|+||||++.+-.
T Consensus 649 ~~~~~~~~~iG~TkVFlk~~~~ 670 (677)
T cd01387 649 CGVEPPMYRVGASKLFLKEHLH 670 (677)
T ss_pred cCCCcccEEecceeEEEcCCHH
Confidence 9999999999999999886543
No 13
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=1.9e-55 Score=436.58 Aligned_cols=229 Identities=31% Similarity=0.494 Sum_probs=207.9
Q ss_pred CCCcccccchhhh--HHHHhcC-cccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFS-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiek-p~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||.|+.|+|.|| |||||++ |.|||++|||||++|++||++|+++|++.+++++.|..++...+..|+|+||||+|.
T Consensus 411 EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~~~~~~d~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~ 490 (679)
T cd00124 411 EGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPKGTDETFLEKLNNKLKSNNAFYPAKKNAPTEFTIKHYAGDVT 490 (679)
T ss_pred cCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhCCCCCCHHHHHHHHHHHhcCCcccccCCCCCCCceEEEeeceeEE
Confidence 8999999999999 9999996 789999999999999999999999999999999987665555678999999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCcc----------------------ccCCCcchHHHHHHHHhccC
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHE----------------------KRAGIPRVLGRLMVTLRNTN 133 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~----------------------~~~~~~~sL~~L~~~L~~t~ 133 (266)
|++.||++||. + .+++.+|++|++.+++.+|+... ..++|+.+|+.||++|++|+
T Consensus 491 Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~qL~~L~~~L~~t~ 570 (679)
T cd00124 491 YDARGFLEKNKDVLSPELVSLLKSSSNPFIRELFESELSKTGNSSTGSTSSKGKKKKGQTVGSQFRTSLDALMATLNSTE 570 (679)
T ss_pred ecCCCHHHhcCCcccHHHHHHHHhCCcHHHHHHhccccccccccccccccccccccCCCcHHHHHHHHHHHHHHHHhcCC
Confidence 99999999974 3 56788999999999999997521 01247889999999999999
Q ss_pred CceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCc--CchHHHHHHHH
Q psy3667 134 PNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSE--FDSGVVEVFSA 211 (266)
Q Consensus 134 ~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~--~~d~~~~ll~~ 211 (266)
||||||||||+.+.|+.||.+.|++||||+||+|++|++++|||+|++|.+|+.||+.|++...+.. ....|+.++..
T Consensus 571 ~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~irirr~Gyp~R~~~~eF~~rY~~L~~~~~~~~~~~~~~~~~il~~ 650 (679)
T cd00124 571 PHFIRCIKPNEEKKPNAFDSGKVLQQLRYLGILETIRIRRLGFSVRIPFDEFLSRYRFLAPDLLEKVSLTKKQVECLLEL 650 (679)
T ss_pred CeEEEEECCCcccCCCccChHHHHHHHHHhchHHHHHHHHccCCceeeHHHHHHHHHHhCcccccccCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999998777653 23348999999
Q ss_pred cCCCCCcEEecccceeCCc
Q psy3667 212 LCLEFGVHSASSSGVCSPA 230 (266)
Q Consensus 212 l~l~~~~~~~G~t~VF~~~ 230 (266)
++|+.++|++|+||||++.
T Consensus 651 ~~~~~~~~~vGkTkVFlr~ 669 (679)
T cd00124 651 LGLPKDEWQVGKTKVFLKE 669 (679)
T ss_pred cCCCccCEEecCCeEEECc
Confidence 9999999999999999774
No 14
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=1.2e-53 Score=420.19 Aligned_cols=217 Identities=29% Similarity=0.446 Sum_probs=193.8
Q ss_pred CCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEecccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGM 78 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~ 78 (266)
|||+|+.|+|.|| |||||+ +|.|||+||||||++|++||++|++|+++.+++ +.|.+|+. .+..|+|+||||+|.
T Consensus 422 EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~~~~~td~~~~~kl~~~~~~-~~~~~~~~-~~~~F~I~HyAG~V~ 499 (653)
T cd01379 422 EGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQTLVEKFEDNLKS-KFFWRPKR-VELSFGIHHYAGKVL 499 (653)
T ss_pred cCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCccCCCC-CCCceEEEEeceeEe
Confidence 8999999999999 999997 778999999999999999999999999998854 56777764 467899999999999
Q ss_pred ccchhHHHHHH--H-HHHHHHHhccCccccccccCCccccCCCcchHHHHHHHHhccCCceeeeccCccccccCCCChHH
Q psy3667 79 FRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEKRAGIPRVLGRLMVTLRNTNPNFVRCIIPNHEKRAGKIDAPL 155 (266)
Q Consensus 79 Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~~~~p~~fd~~~ 155 (266)
|++.||++||. + .+++.+|++| .+..++|+.+|.+||.+|++|+||||||||||+.+.|+.||.+.
T Consensus 500 Y~~~gfleKNkD~l~~~~~~ll~~S-----------~tv~~~fr~~l~~L~~~l~~t~~hfIRCIKPN~~k~~~~fd~~~ 568 (653)
T cd01379 500 YNASGFLEKNRDFLPADIVLLLRSS-----------QTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNEDRQAKKFDAEK 568 (653)
T ss_pred ecCCCHHHhccccccHHHHHHHHhC-----------cHHHHHHHHHHHHHHHHHhccCCceEEeeCCCcccCccccCHHH
Confidence 99999999974 3 4667777776 23356789999999999999999999999999999999999999
Q ss_pred HHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC--CcCchHHHHHHHHcCCCCCcEEecccceeCCcccc
Q psy3667 156 VLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR--SEFDSGVVEVFSALCLEFGVHSASSSGVCSPAVWP 233 (266)
Q Consensus 156 V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~--~~~~d~~~~ll~~l~l~~~~~~~G~t~VF~~~~w~ 233 (266)
|++||||+||+|++||+|+|||+|++|.+|+.||++|++.... ...++.|+.||..++++ +|++|+||||++.+-.
T Consensus 569 V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~~rY~~l~~~~~~~~~~~~~~~~~il~~~~~~--~~~~GktkvFlk~~~~ 646 (653)
T cd01379 569 VLKQLRYTGILETARIRRQGFSHRILFANFIRRYCFLAYRFEEEPVSSPESCALILEKAKLD--NWALGKTKVFLKYYHV 646 (653)
T ss_pred HHHHHHHcchHHHHHHHHcCCCccccHHHHHHHHHHhccccccccCChHHHHHHHHHhCCCC--CEEecceEEEEecCHH
Confidence 9999999999999999999999999999999999999876543 23688999999998875 6999999999987543
No 15
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=1.7e-53 Score=424.55 Aligned_cols=233 Identities=21% Similarity=0.305 Sum_probs=200.1
Q ss_pred CCCcccccch-hhh--HHHHhcCc---------------ccccccccccccCCCCChHHHHHHHHHhccCCCcccccC--
Q psy3667 2 DSIGMSCIKY-ILF--FFNLLFSP---------------MGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTD-- 61 (266)
Q Consensus 2 egi~~~~i~~-~dn--~idLiekp---------------~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~-- 61 (266)
|||+|+.+.+ .|| ||||||++ .|||+||||||++|++||++|++||++.+++++.|.++.
T Consensus 428 EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~ 507 (767)
T cd01386 428 EGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFAAYGDRETRETGLSR 507 (767)
T ss_pred hcCCccccccCCCchhhHHHhhcccccccccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHHHhccCCCcccCccc
Confidence 8999987655 466 99999963 499999999999999999999999999999888886521
Q ss_pred ---CCCccceEEEecccc--ccccchhHHHHHH--H--HHHHHHHhccCccccccccCCcc-------------------
Q psy3667 62 ---FRGVADFAIVHYAGK--GMFRTVSQLYKEQ--L--TKLMVTLRNTNPNFVRCIIPNHE------------------- 113 (266)
Q Consensus 62 ---~~~~~~F~I~HyAG~--v~Y~~~~~l~k~~--l--~~l~~~L~~s~~~fv~~lf~~~~------------------- 113 (266)
...+..|+|+||||. |.|++.||++||. + .+++.+|++|++++++.||+...
T Consensus 508 ~~~~~~~~~F~I~HyAG~~~V~Y~~~gfleKNkD~~~~~~~~~ll~~S~~~~i~~lF~~~~~~~~~~~~~~~~~~~~~~~ 587 (767)
T cd01386 508 LRTCEGPLQFVLFHLLGTNPVLYDVTGWLRRAKPNPAALNAPQLLQDSKREEINSLFQGRAGLAPVCLGAGAGLEGTSQQ 587 (767)
T ss_pred cccCCCCCcEEEEEcCCCCceEecCCCHHHhcCCCCChHHHHHHHHhCCcHHHHHHHhcccccccccccccccccccccc
Confidence 123568999999995 9999999999973 2 57788999999999999984210
Q ss_pred --------c---------------cCCCcchHHHHHHHHhccCCceeeeccCccccc----------------------c
Q psy3667 114 --------K---------------RAGIPRVLGRLMVTLRNTNPNFVRCIIPNHEKR----------------------A 148 (266)
Q Consensus 114 --------~---------------~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~~~~----------------------p 148 (266)
+ .++|+.||++||++|++|+||||||||||+.+. |
T Consensus 588 ~~~~~~~~~~~~~~~~~~~k~~tv~~qFk~qL~~Lm~~L~~t~phfIRCIKPN~~k~~~~~~~~~~~~~~~~~~~~~~~p 667 (767)
T cd01386 588 ALRRSSSIRRTFTSSTAAVKRKSPCVQVKLQVDALIDTLRRSGLHFVHCYLPQHNGGKAMARTASPSPQQSEDNGVAAEP 667 (767)
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHhccCCeeEEEeCccccccccccccccccccccccccccccc
Confidence 0 013678999999999999999999999999874 7
Q ss_pred CCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC--------cCchHHHHHHHHcCCCCCcEE
Q psy3667 149 GKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS--------EFDSGVVEVFSALCLEFGVHS 220 (266)
Q Consensus 149 ~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~--------~~~d~~~~ll~~l~l~~~~~~ 220 (266)
+.||.++|++||||+||+|++||+|+|||+|++|.+|+.||++|.+..++. +.++.|+.||+.++++..+|+
T Consensus 668 ~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~RY~~L~~~~~~~~~~~~~~~d~r~~~~~il~~~~~~~~~~~ 747 (767)
T cd01386 668 LALDIPLLRSQLRGSQILEAARLHRLGFPISVPLGEFVRRFGLLAEGLTKKVGGAGGGADERAAVEEILENLELDKSSYR 747 (767)
T ss_pred cccCHHHHHHHHHhcccHHHHHHHhcCCcccccHHHHHHHHHhhChhhcccccccccCCCHHHHHHHHHHHcCCCcceEE
Confidence 899999999999999999999999999999999999999999998765432 346778999999999999999
Q ss_pred ecccceeCCccccC
Q psy3667 221 ASSSGVCSPAVWPA 234 (266)
Q Consensus 221 ~G~t~VF~~~~w~~ 234 (266)
+|+||||++++...
T Consensus 748 iGkTKVFlr~~~~~ 761 (767)
T cd01386 748 IGHSQVFFRAGVLS 761 (767)
T ss_pred eecceEEecccHHH
Confidence 99999999876443
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=1.9e-52 Score=417.23 Aligned_cols=228 Identities=32% Similarity=0.541 Sum_probs=199.3
Q ss_pred CCCcccccch-hhh--HHHHhcC-cccccccccccccCCCCChHHHHHHHHHhc-cCCCcccccC---CCCccceEEEec
Q psy3667 2 DSIGMSCIKY-ILF--FFNLLFS-PMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD---FRGVADFAIVHY 73 (266)
Q Consensus 2 egi~~~~i~~-~dn--~idLiek-p~Gll~lLDee~~~p~~sD~~fl~kl~~~~-~~~~~f~~~~---~~~~~~F~I~Hy 73 (266)
|||.|+.++| .|| |+|||++ |.|||+||||||+.|++||++|+++|.+.+ ++++.|.+|+ ......|+|+||
T Consensus 413 EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~~~~~sd~~fl~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~Hy 492 (689)
T PF00063_consen 413 EGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECLLPRGSDESFLEKLLKRHSGKHPSFVKPRFSRSTSKSSFTIKHY 492 (689)
T ss_dssp TTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCTSTTS-HHHHHHHHHHHHTTTSTTEECTSSSTSSTTSCEEEEET
T ss_pred ccccccccccccCchhhhhhhccccCCHHHHhhhhhhcccchhhHHHHHHHhhcccCCCcccccccccccCCCceEeecc
Confidence 8999999999 898 9999996 899999999999999999999999999999 8889998774 246789999999
Q ss_pred cccccccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc--------------------------------cCCC
Q psy3667 74 AGKGMFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK--------------------------------RAGI 118 (266)
Q Consensus 74 AG~v~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~--------------------------------~~~~ 118 (266)
||+|.|++.||++||. + .+++.+|++|++.||+.+|..... ..+|
T Consensus 493 aG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~n~~v~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~qf 572 (689)
T PF00063_consen 493 AGDVTYDVEGFLEKNRDPLSQDFVSLLRSSTNSFVSSLFSSEATATSSSSSSLSRRSSSSSTQSRSSGSKKKKSTVSSQF 572 (689)
T ss_dssp TEEEEEE-TTHHHHHHE-S-HHHHHHHHTSSSHHHHHHTHSHHH---S-S-S-BTTTTCCCTTSSCCCGGTCSSBHHHHH
T ss_pred cCcceeccccccccccchHHHHHHHHHHhCcCcccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999984 2 568889999999999998865421 0146
Q ss_pred cchHHHHHHHHhccCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC
Q psy3667 119 PRVLGRLMVTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR 198 (266)
Q Consensus 119 ~~sL~~L~~~L~~t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~ 198 (266)
+.+|++||+.|++|+||||||||||+.+.|+.||.++|++||+++||+|++++++.|||+|++|.+|++||+.|.+...+
T Consensus 573 ~~sL~~L~~~L~~t~~hfIrCIkPN~~~~~~~FD~~~V~~QLr~~gile~vri~~~Gyp~r~~~~eF~~RY~~L~~~~~~ 652 (689)
T PF00063_consen 573 RSSLDELMDTLRSTQPHFIRCIKPNDQKKPNQFDSKLVLRQLRYSGILETVRIRRQGYPVRLTFDEFLRRYKCLLPSSSS 652 (689)
T ss_dssp HHHHHHHHHHHCTSEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHCSSSEEEEHHHHHHHHGGGSTTCSH
T ss_pred cccHHHHHhhhhhcccceEEEeccccccccccccchheehhhhhhhhhhhhhhhhcccceecchhhhhhhhceechhhcc
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999987664
Q ss_pred ------CcCchHHHHHHHHcCCCCCcEEecccceeCC
Q psy3667 199 ------SEFDSGVVEVFSALCLEFGVHSASSSGVCSP 229 (266)
Q Consensus 199 ------~~~~d~~~~ll~~l~l~~~~~~~G~t~VF~~ 229 (266)
.+.++.|+.||+.++|+..+|++|+||||++
T Consensus 653 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~iG~TkVFLk 689 (689)
T PF00063_consen 653 SSDSSKEDDKEACEALLEQLDLESSDYQIGKTKVFLK 689 (689)
T ss_dssp SS--HCSSHHHHHHHHHHHTTSEGTCEEEESSEEEEC
T ss_pred cccccCCCHHHHHHHHHHhCCCCccCEEECCcEEEEC
Confidence 3478899999999999999999999999975
No 17
>KOG0162|consensus
Probab=100.00 E-value=1.1e-49 Score=379.16 Aligned_cols=224 Identities=22% Similarity=0.376 Sum_probs=205.9
Q ss_pred CCCcccccchhhh--HHHHhc--CcccccccccccccCC----CCChHHHHHHHHHhccCCCcccccCCCCccceEEEec
Q psy3667 2 DSIGMSCIKYILF--FFNLLF--SPMGIMALLDEECWFP----KATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHY 73 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLie--kp~Gll~lLDee~~~p----~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~Hy 73 (266)
|||.|.+|+|||| +||||| .|.||+++|||.|... .+-|++|+++|...+++|++|.. +...|.|+||
T Consensus 432 E~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~Ha~~~~aDqa~~qrLn~~~~s~phF~~----~s~~FvIkHY 507 (1106)
T KOG0162|consen 432 EGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATAHADSEGADQALLQRLNKLFGSHPHFES----RSNGFVIKHY 507 (1106)
T ss_pred hcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHhccccchhHHHHHHHHHHHhcCCCcccc----ccCceEEEEe
Confidence 8999999999999 999999 5789999999999853 57899999999999999999975 4678999999
Q ss_pred cccccccchhHHHHH--HH-HHHHHHHhccCccccccccCCccc----------cCCCcchHHHHHHHHhccCCceeeec
Q psy3667 74 AGKGMFRTVSQLYKE--QL-TKLMVTLRNTNPNFVRCIIPNHEK----------RAGIPRVLGRLMVTLRNTNPNFVRCI 140 (266)
Q Consensus 74 AG~v~Y~~~~~l~k~--~l-~~l~~~L~~s~~~fv~~lf~~~~~----------~~~~~~sL~~L~~~L~~t~~~fVrCI 140 (266)
||+|.||..|+.++| .+ .+|+.++.+|.+.|++.+||.... ...++.|.++|+++|.+|+|||||||
T Consensus 508 AGdVtYdi~G~~drNrD~L~~DlieLm~ts~~~Fl~slFPe~v~~dskrRP~Tag~kIkkqANdLVeTLmKc~P~YIR~I 587 (1106)
T KOG0162|consen 508 AGDVTYDIDGFCDRNRDVLFKDLIELMQTSENPFLKSLFPENVDADSKRRPPTAGDKIKKQANDLVETLMKCQPHYIRCI 587 (1106)
T ss_pred ccceeeecccccccchhHHHHHHHHHHhccchHHHHHhCchhhcccccCCCCCchhhHHhhHHHHHHHHHhcCcceeEee
Confidence 999999999999885 34 788999999999999999996521 13467899999999999999999999
Q ss_pred cCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCc---CchHHHHHHHHcCCCCC
Q psy3667 141 IPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSE---FDSGVVEVFSALCLEFG 217 (266)
Q Consensus 141 KPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~---~~d~~~~ll~~l~l~~~ 217 (266)
|||+.|.|+.||...|.+|+.|+|+-|.||+||+||.+|..|+.|++||.+|.|.+|+.| ..++|+.||+...+|++
T Consensus 588 KPNeTK~pnD~ee~~V~HQveYLGLqENiRvRRAGfAYRr~F~kF~qRyailsp~t~~twqGD~~~av~~il~~~~m~~~ 667 (1106)
T KOG0162|consen 588 KPNETKSPNDWEESRVKHQVEYLGLQENIRVRRAGFAYRRAFDKFAQRYAILSPQTWPTWQGDEKQAVEHILRDVNMPSD 667 (1106)
T ss_pred CCCCCCCCccHHHHHHHHHHHhcchhhheeehhhhhHHHHHHHHHHHHheecCcccccccccchHHHHHHHHHhcCCChh
Confidence 999999999999999999999999999999999999999999999999999999999865 67788999999999999
Q ss_pred cEEecccceeCC
Q psy3667 218 VHSASSSGVCSP 229 (266)
Q Consensus 218 ~~~~G~t~VF~~ 229 (266)
+|++|.|+||.+
T Consensus 668 qyQmG~tkVFiK 679 (1106)
T KOG0162|consen 668 QYQMGVTKVFIK 679 (1106)
T ss_pred HhhccceeEEec
Confidence 999999999953
No 18
>KOG0164|consensus
Probab=100.00 E-value=1e-48 Score=372.33 Aligned_cols=227 Identities=28% Similarity=0.485 Sum_probs=206.6
Q ss_pred CCCcccccchhhh--HHHHhcCc-ccccccccccccCCC-CChHHHHHHHHHhccCCCcccccCC------CCccceEEE
Q psy3667 2 DSIGMSCIKYILF--FFNLLFSP-MGIMALLDEECWFPK-ATDRSFVEKLVQSHSQHAKFKKTDF------RGVADFAIV 71 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiekp-~Gll~lLDee~~~p~-~sD~~fl~kl~~~~~~~~~f~~~~~------~~~~~F~I~ 71 (266)
|||.|..|+||+| +|||+|.| .||++||||||..|+ -||.+||++|.+.+++|++|..-+. -.-..|.|.
T Consensus 424 EgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl~~G~vtD~tfL~~l~~~~~~H~Hy~sr~~~~~dksl~~~~Fri~ 503 (1001)
T KOG0164|consen 424 EGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACLRPGTVTDETFLEKLNQKLKKHPHYTSRKLKQTDKSLGFSDFRIT 503 (1001)
T ss_pred cCCCceehhhcCCceeeehhccCccchhhhhhHHhcCCCccchHHHHHHHHHHhhhCCcchhhhccccccccCccceeEE
Confidence 8999999999999 99999976 699999999999985 6999999999999999999976432 134589999
Q ss_pred eccccccccchhHHHHHH---HHHHHHHHhccCccccccccCCcc-------c-----cCCCcchHHHHHHHHhccCCce
Q psy3667 72 HYAGKGMFRTVSQLYKEQ---LTKLMVTLRNTNPNFVRCIIPNHE-------K-----RAGIPRVLGRLMVTLRNTNPNF 136 (266)
Q Consensus 72 HyAG~v~Y~~~~~l~k~~---l~~l~~~L~~s~~~fv~~lf~~~~-------~-----~~~~~~sL~~L~~~L~~t~~~f 136 (266)
||||+|.|++.||++||. ..++-.+|.+|+++.++.+||... + ..+|+.|+..||+.|.+-+|+|
T Consensus 504 HYAG~V~YsV~gFidKN~D~Lf~dlk~~m~~s~~~~l~~~fpeG~~~~~~~tkRP~Tagt~Fk~Sm~~Lv~nL~sKeP~Y 583 (1001)
T KOG0164|consen 504 HYAGDVTYSVEGFIDKNNDLLFQDLKRLMYNSKNPLLKSLFPEGNPDIAEVTKRPPTAGTLFKNSMAALVKNLASKEPNY 583 (1001)
T ss_pred EeccceEEEEEeeeccCccHHHHHHHHHHHhcCCchHHHhCCCCChhHHhhhcCCCcHHHHHHHHHHHHHHHHhhcCCCe
Confidence 999999999999999963 267778889999999999999653 1 2468999999999999999999
Q ss_pred eeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCc----CchHHHHHHHHc
Q psy3667 137 VRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSE----FDSGVVEVFSAL 212 (266)
Q Consensus 137 VrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~----~~d~~~~ll~~l 212 (266)
|||||||+.+.|+.||...|++|++|+|++|.+|++|+||.+|.+|+.|+.||+++++.+||++ .+|.+..|++..
T Consensus 584 vRcikPNe~k~~~~fd~e~~~hqv~ylGLleNvrVrrAgfahRq~Y~~FL~RYKmi~~~TWPn~~~g~dkd~v~vL~e~~ 663 (1001)
T KOG0164|consen 584 VRCIKPNEHKQPGQFDEERVRHQVRYLGLLENVRVRRAGFAHRQPYERFLLRYKMICESTWPNWRGGSDKDGVKVLLEHL 663 (1001)
T ss_pred EEeeccccccCccccchhhhHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHhhCcccCCCCCCCCchhHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999964 578899999999
Q ss_pred CCCCCcEEecccceeCC
Q psy3667 213 CLEFGVHSASSSGVCSP 229 (266)
Q Consensus 213 ~l~~~~~~~G~t~VF~~ 229 (266)
++. .++..|.||||.|
T Consensus 664 g~~-~d~a~G~TKIFIR 679 (1001)
T KOG0164|consen 664 GLA-GDVAFGRTKIFIR 679 (1001)
T ss_pred ccc-hhhhcCceeEEEe
Confidence 998 8999999999943
No 19
>KOG0161|consensus
Probab=100.00 E-value=1.2e-47 Score=402.45 Aligned_cols=233 Identities=42% Similarity=0.704 Sum_probs=207.9
Q ss_pred CCCcccccchhhh---HHHHhcCcccccccccccccCCCCChHHHHHHHHHhc-cCCCcccccC-CCCccceEEEecccc
Q psy3667 2 DSIGMSCIKYILF---FFNLLFSPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-FRGVADFAIVHYAGK 76 (266)
Q Consensus 2 egi~~~~i~~~dn---~idLiekp~Gll~lLDee~~~p~~sD~~fl~kl~~~~-~~~~~f~~~~-~~~~~~F~I~HyAG~ 76 (266)
|||.|.-|+|.-+ ||||||+|.||+|+|||||.+|++||.+|+++|...| ++|+.|.+|+ .....+|.|.||||+
T Consensus 497 EgIew~fidfG~Dlq~~idLIEkp~Gi~slLdEEc~~PkAtd~tf~~kL~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~ 576 (1930)
T KOG0161|consen 497 EGIEWDFIDFGLDLQPTIDLIEKPMGILSLLDEECVVPKATDKTFLEKLCDQHLGKHPKFQKPKGKKAEAHFALVHYAGT 576 (1930)
T ss_pred hCCceeeeccccchhhhHHHHhchhhHHHHHHHHHhcCCCccchHHHHHHHHhhccCccccCcccccchhhhheeeecce
Confidence 8999999999743 9999999999999999999999999999999999999 9999999994 346789999999999
Q ss_pred ccccchhHHHHH--HHHH-HHHHHhccCccccccccCCc---------------cccCCC-------cchHHHHHHHHhc
Q psy3667 77 GMFRTVSQLYKE--QLTK-LMVTLRNTNPNFVRCIIPNH---------------EKRAGI-------PRVLGRLMVTLRN 131 (266)
Q Consensus 77 v~Y~~~~~l~k~--~l~~-l~~~L~~s~~~fv~~lf~~~---------------~~~~~~-------~~sL~~L~~~L~~ 131 (266)
|.|++.+|+.|| .+++ ++.+|..|.+.+|+.||++. .+++.| +.+|..||.+|++
T Consensus 577 V~Y~~~~WL~Knkdpln~~v~~ll~~s~~~~v~~l~~~~~~~~~~~~~~~~~~~~K~g~F~Tvs~~~keql~~Lm~~l~~ 656 (1930)
T KOG0161|consen 577 VDYNVDGWLEKNKDPLNDNVVSLLKQSTNKLVSSLFQDYAGAAAAAKGGEALKKTKKGSFRTVSQLYKEQLNKLMTTLRS 656 (1930)
T ss_pred eccCccchhhcCCCCchHHHHHHHHhcccHHHHHHhhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHhcc
Confidence 999999999996 3444 46777888899999998751 112223 4589999999999
Q ss_pred cCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCcC---chHHHHH
Q psy3667 132 TNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSEF---DSGVVEV 208 (266)
Q Consensus 132 t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~---~d~~~~l 208 (266)
|+|||||||.||..+.|+.+|.++|+.||+|.||+|.|||.|.|||.|++|.+|..||.++.+...+.++ +..|+.+
T Consensus 657 T~phFvRCiIPn~~K~~g~ld~~lvl~QLrcngVLEgIRicR~GfPnr~~~~eFrqRy~lla~~~~~~~~~d~k~~~~~~ 736 (1930)
T KOG0161|consen 657 THPHFVRCIIPNEEKKPGKLDAPLVLNQLRCNGVLEGIRICRQGFPNRMPFQEFRQRYELLAADEPKKGFSDGKKACEKI 736 (1930)
T ss_pred CCCceeEEeccCccccccccCHHHHHHHhhccCcHHHHHHHHhhCccccchHHHHHhHHhhhhhhccccccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999966666666543 5577999
Q ss_pred HHHcCCCCCcEEecccceeCCccccC
Q psy3667 209 FSALCLEFGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 209 l~~l~l~~~~~~~G~t~VF~~~~w~~ 234 (266)
+..+.++.+.|++|.|||||++|.++
T Consensus 737 ~~~l~~d~~lyriG~tKvFfkaGvla 762 (1930)
T KOG0161|consen 737 LEELLLDKNLYRIGHTKVFFKAGVLA 762 (1930)
T ss_pred HHHHhcccceEeecceeeeehHHHHH
Confidence 99999999999999999999999987
No 20
>KOG0160|consensus
Probab=100.00 E-value=3.6e-43 Score=347.26 Aligned_cols=234 Identities=34% Similarity=0.475 Sum_probs=212.1
Q ss_pred CCCcccccchhhh--HHHHhcCcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEeccccccc
Q psy3667 2 DSIGMSCIKYILF--FFNLLFSPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKGMF 79 (266)
Q Consensus 2 egi~~~~i~~~dn--~idLiekp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v~Y 79 (266)
|||.|+.|+|+|| |+++||+|.|+++||||||++|.++|++|..+|...+.+++.|.+|+. ....|+|.||||+|.|
T Consensus 417 e~i~Ws~ief~dNq~~~~lie~~~Gi~~Llde~c~lp~~t~~~~a~KL~~~~~~~~~f~kpr~-~~~~f~v~hyAg~v~y 495 (862)
T KOG0160|consen 417 EEIDWSGIEFRDNQECLDLIEKPLGILALLDEECMLPKGTDETLAQKLYQTLKRNKRFTKPRL-SRTDFRVAHYAGDVTY 495 (862)
T ss_pred hccccccccCcCccchhhhhccccchhhccchhccCCCCCcchHHHHHHHHhccCCccCCCCC-CcCCcccccccCcccc
Confidence 7999999999999 999999999999999999999999999999999999999999999986 4668999999999999
Q ss_pred cchhHHHHHHH---HHHHHHHhccCccccccccCCcc-----------ccCCCcchHHHHHHHHhccCCceeeeccCccc
Q psy3667 80 RTVSQLYKEQL---TKLMVTLRNTNPNFVRCIIPNHE-----------KRAGIPRVLGRLMVTLRNTNPNFVRCIIPNHE 145 (266)
Q Consensus 80 ~~~~~l~k~~l---~~l~~~L~~s~~~fv~~lf~~~~-----------~~~~~~~sL~~L~~~L~~t~~~fVrCIKPN~~ 145 (266)
++.+|++|+.. ..++.++..++.+|+..+++... ..++|+.+|..||.+|++|+||||||||||..
T Consensus 496 ~~~~fL~knrd~v~~el~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~tv~s~fk~~l~~Lm~~l~~t~phyircikPn~~ 575 (862)
T KOG0160|consen 496 DTEGFLEKNRDYVSDELIDLLLASDCHFVAGLAPPLRADSSAKSKRSTVGSQFKLQLISLMETLNSTPPHYIRCIKPNAE 575 (862)
T ss_pred chhhhccCCccccCHHHHhhhhhcccchHHHhccchhcchhhhhhcccHHHHHHHHHHHHHHHhcCCCCCCceeeCcchh
Confidence 99999999742 66788889999999999887221 12358889999999999999999999999999
Q ss_pred cccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCCcCchHHHHHHHHcCCCCCcEEecccc
Q psy3667 146 KRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRSEFDSGVVEVFSALCLEFGVHSASSSG 225 (266)
Q Consensus 146 ~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~~~~d~~~~ll~~l~l~~~~~~~G~t~ 225 (266)
+.|..|+...|.+|||++|+||++|+..+|||.|.+|.||..||+.|.|.....+...-|+.+|+.++++ .|++|.||
T Consensus 576 ~~p~~fe~~~v~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~~r~~~L~~~~~~~~~~~~~~~il~~~~~~--~yq~g~tk 653 (862)
T KOG0160|consen 576 KKPQIFENNLVLQQLRCCGVLETIRISCAGFPTRWTFIEFVNRYGILMPNDSASDDLSLCKVILEKLGLE--LYQIGKTK 653 (862)
T ss_pred cccccccccceeeeccccceehhheeccccCCccccHHHHHHHHhhcCcchhcccchHHHHHHHHHhchh--ceeeeeee
Confidence 9999999999999999999999999999999999999999999999999333334577889999999999 99999999
Q ss_pred eeCCccccCCCCC
Q psy3667 226 VCSPAVWPAPFGK 238 (266)
Q Consensus 226 VF~~~~w~~~~~~ 238 (266)
||+++|-+...+.
T Consensus 654 if~r~gq~~~le~ 666 (862)
T KOG0160|consen 654 IFLRAGQIAVLEA 666 (862)
T ss_pred eeeccchhHHHHH
Confidence 9999998774433
No 21
>KOG0163|consensus
Probab=100.00 E-value=2e-42 Score=330.42 Aligned_cols=234 Identities=22% Similarity=0.330 Sum_probs=209.3
Q ss_pred CCCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCC---------CCccce
Q psy3667 1 MDSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDF---------RGVADF 68 (266)
Q Consensus 1 ~egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~---------~~~~~F 68 (266)
.||+.++.|.|.|| ||+||| |..|||.|||||.++|+.|++.|..+.|+.+++|-....|+. +....|
T Consensus 499 kEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEaklP~~s~qhFT~~vHe~~k~HfRL~~PRkSklksHR~lRDdEG~ 578 (1259)
T KOG0163|consen 499 KEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAKLPKPSYQHFTARVHESNKNHFRLDLPRKSKLKSHRELRDDEGF 578 (1259)
T ss_pred hcCCCCCceEeccchhHHHHHHHhccchhhhhhhhccCCCcchHHHHHHHHHhhhcceeecCCchhhhhhhhhhccccce
Confidence 38999999999999 999999 668999999999999999999999999999999988877732 356789
Q ss_pred EEEeccccccccchhHHHHHH--H-HHHHHHHhccCccccccccCCccc---------------cCCCcchHHHHHHHHh
Q psy3667 69 AIVHYAGKGMFRTVSQLYKEQ--L-TKLMVTLRNTNPNFVRCIIPNHEK---------------RAGIPRVLGRLMVTLR 130 (266)
Q Consensus 69 ~I~HyAG~v~Y~~~~~l~k~~--l-~~l~~~L~~s~~~fv~~lf~~~~~---------------~~~~~~sL~~L~~~L~ 130 (266)
.|+||||.|.|.+..|++||. + +.|-.++..|.++++..||+.... .+.|+++|..||++|+
T Consensus 579 liRHfAGaVCYeT~~FvEKNnD~LH~SLe~Li~es~~~ll~sLF~S~s~t~a~~~~gkL~~iSVGaKFKtQL~~LldKL~ 658 (1259)
T KOG0163|consen 579 LIRHFAGAVCYETEQFVEKNNDALHNSLEGLIEESDNPLLVSLFPSGSSTSAKQTRGKLKFISVGAKFKTQLSELLDKLE 658 (1259)
T ss_pred eeeecccceeechHHHHHhccHHHHHHHHHHHHhccchHHHHHccCCCCCccccccceeeEEehhHHHHHHHHHHHHHHH
Confidence 999999999999999999963 3 556667789999999999987421 2358999999999999
Q ss_pred ccCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcCC-cCchHHHHHH
Q psy3667 131 NTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVRS-EFDSGVVEVF 209 (266)
Q Consensus 131 ~t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~~-~~~d~~~~ll 209 (266)
+|..|||||||||..+.+.+||...++.||+|+|++..+++++.|||.|..|.+...-|+-..|..+.. +++-=|++++
T Consensus 659 stGt~FiRCiKPN~kM~~~~FeGs~iLsQLqCsGm~SVL~LMq~GyPSR~~F~dLYamYkk~lPpkLarLdpRlFck~lF 738 (1259)
T KOG0163|consen 659 STGTHFIRCIKPNSKMIDRHFEGSAILSQLQCSGMISVLELMQHGYPSRTSFADLYAMYKKVLPPKLARLDPRLFCKALF 738 (1259)
T ss_pred hcCCeeEEeecCccccccccccHHHHHHHhhhccHHHHHHHHhcCCCccccHHHHHHHHHhhCCHhhhcCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999777765543 4666789999
Q ss_pred HHcCCCCCcEEecccceeCCccccC
Q psy3667 210 SALCLEFGVHSASSSGVCSPAVWPA 234 (266)
Q Consensus 210 ~~l~l~~~~~~~G~t~VF~~~~w~~ 234 (266)
.+||++.++|++|.|||||++|=-.
T Consensus 739 ~aLgL~q~DfkFGlTKVFFr~GKFa 763 (1259)
T KOG0163|consen 739 QALGLDQNDFKFGLTKVFFRPGKFA 763 (1259)
T ss_pred HHhCCCcccccccceeEeecCcchH
Confidence 9999999999999999999987443
No 22
>KOG4229|consensus
Probab=99.79 E-value=8.6e-20 Score=185.56 Aligned_cols=225 Identities=22% Similarity=0.246 Sum_probs=176.6
Q ss_pred CCCCcccccchhhh--HHHHhc-CcccccccccccccCCCCChHHHHHHHHHhccCCCcccccCCCCccceEEEeccccc
Q psy3667 1 MDSIGMSCIKYILF--FFNLLF-SPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKG 77 (266)
Q Consensus 1 ~egi~~~~i~~~dn--~idLie-kp~Gll~lLDee~~~p~~sD~~fl~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~v 77 (266)
.|+|.|..|.|.|| |+|||. ||.||+.+||||+.+|+++|.+++.|++..++.+..|..|+......|+|.||||+|
T Consensus 475 ~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~fP~~td~tl~~k~~~q~~~~~~y~~~k~~~e~~f~I~Hyagkv 554 (1062)
T KOG4229|consen 475 NESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESRFPKATDQTLLLKLNMQHGSNNLYVFPKSRVETVFGITHYAGKV 554 (1062)
T ss_pred hcCCCeeeeeeeeccchhhhhccCccchhheecccCcCCchHHHHHHHHhhhhhhcccccccccccccceeeeeeeccee
Confidence 38999999999999 999998 799999999999999999999999999999999888888887778899999999999
Q ss_pred cccchhHHHHHHH---HHHHHHHhccCccccccccCCccc-----------------------c----------------
Q psy3667 78 MFRTVSQLYKEQL---TKLMVTLRNTNPNFVRCIIPNHEK-----------------------R---------------- 115 (266)
Q Consensus 78 ~Y~~~~~l~k~~l---~~l~~~L~~s~~~fv~~lf~~~~~-----------------------~---------------- 115 (266)
.|++.+++++|.. +++...++++.+.+++.+...... +
T Consensus 555 ~y~~~~flekNrD~~~~d~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (1062)
T KOG4229|consen 555 QYNIRGFLEKNRDTVRNDLVNLLRSSDESLLRQLVNGDPTAVSRWFELRALKVAMPVPLEVTLRRPVRKTLTADSSRSAP 634 (1062)
T ss_pred hhhhhhHHHhhhhhhhhhHHhhcccccchhhcccCCCCCccCCcchhhhhhcccccccchhhhccccccccccccccchH
Confidence 9999999999742 567777777777776665432210 0
Q ss_pred -----------CCCcchHHHHHHHHhccCCceeeeccCccccccCCCChH-HHHHHhhhhCCccceeeeecCCccccccc
Q psy3667 116 -----------AGIPRVLGRLMVTLRNTNPNFVRCIIPNHEKRAGKIDAP-LVLDQLRCNGVLEGIRICRQGFPNRIPFQ 183 (266)
Q Consensus 116 -----------~~~~~sL~~L~~~L~~t~~~fVrCIKPN~~~~p~~fd~~-~V~~QLr~~gile~iri~r~Gyp~r~~~~ 183 (266)
...+-++......|.+.++||.|||++|+...+.+++.. ....++...|..++....+.|+..++.|.
T Consensus 635 e~~~~~~~~~~~~~~~~~~~~~s~l~rg~~~~~~~i~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1062)
T KOG4229|consen 635 ETTNCLPDKVLPEDRPSLFEELSALARGQDHFMRAISQNPRYALEQGSQERKGPRRLSSRGSTATPSHDRPGRKTNLLYS 714 (1062)
T ss_pred HHHHhhhccccccCChhhhcchhhcCCCccchhhhhhcCchhhhhhcCcccCchhhhhhcccccCCCCCCccccccccch
Confidence 012225666777788889999999999999999888877 88999999999999999999999999999
Q ss_pred ccccccccc--CCCCcCCcCchHHHHHHHHcCCCCCcEEeccccee
Q psy3667 184 MSVPQPFLF--RSNSVRSEFDSGVVEVFSALCLEFGVHSASSSGVC 227 (266)
Q Consensus 184 eF~~Ry~~L--~~~~~~~~~~d~~~~ll~~l~l~~~~~~~G~t~VF 227 (266)
+++.+++.. .++..|.-....+..+++.- ..+.+..+.++++
T Consensus 715 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 758 (1062)
T KOG4229|consen 715 EVVNGRKNSEYLCSPRPDLAERARVQLLEKN--AINMKSERLTTLL 758 (1062)
T ss_pred hhhcccccccccCCCCHHHHHHHHHHHHhhc--cccchhhhhcccc
Confidence 988877743 22222211222334444433 3345556666655
No 23
>KOG4229|consensus
Probab=93.13 E-value=0.032 Score=58.58 Aligned_cols=105 Identities=24% Similarity=0.177 Sum_probs=85.6
Q ss_pred cchHHHHHHHHhccCCceeeeccCccccccCCCChHHHHHHhhhhCCccceeeeecCCccccccccccccccccCCCCcC
Q psy3667 119 PRVLGRLMVTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQMSVPQPFLFRSNSVR 198 (266)
Q Consensus 119 ~~sL~~L~~~L~~t~~~fVrCIKPN~~~~p~~fd~~~V~~QLr~~gile~iri~r~Gyp~r~~~~eF~~Ry~~L~~~~~~ 198 (266)
......++..+....+.|++|++-|..+....|+...|..|+.+.|+.+..+++..+++..+++..+...+.++.+...
T Consensus 796 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~t~~~~~~~v~~~~~~~~i~~~~~~~~~~i~~~~~~- 874 (1062)
T KOG4229|consen 796 QVRKSKLESYLAIAKELFVRRFLENQKKIGLRFPDNVVLRQVSYTGELDQEQVRRSLYFAEISPQDSVNQSRIGLPETV- 874 (1062)
T ss_pred chhhccchhhhhhhhHHHHHHHHHhhhhhccCCChHHHHHhhhchhhhccchheeccccccccchhccccccccCCccc-
Confidence 3456678888888999999999999888889999999999999999999999999999999999999999998776211
Q ss_pred CcCchHHHHHHHHcCCCCCcEEeccccee
Q psy3667 199 SEFDSGVVEVFSALCLEFGVHSASSSGVC 227 (266)
Q Consensus 199 ~~~~d~~~~ll~~l~l~~~~~~~G~t~VF 227 (266)
..........+......++.|..++|
T Consensus 875 ---~~v~~~~~~~~~~n~~~~~~~~~~~~ 900 (1062)
T KOG4229|consen 875 ---DTVADEEFSTLSCNADTIRLGVHVVF 900 (1062)
T ss_pred ---hhhchhheeecccCccchhccceEEe
Confidence 12223444445556677888888887
No 24
>KOG0161|consensus
Probab=74.95 E-value=4 Score=45.94 Aligned_cols=42 Identities=79% Similarity=1.233 Sum_probs=38.3
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCccccccccCCccccCC
Q psy3667 76 KGMFRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRAG 117 (266)
Q Consensus 76 ~v~Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~~ 117 (266)
++++.+++++.+++++.+|..|++|+++||+++.|+..+.++
T Consensus 633 ~g~F~Tvs~~~keql~~Lm~~l~~T~phFvRCiIPn~~K~~g 674 (1930)
T KOG0161|consen 633 KGSFRTVSQLYKEQLNKLMTTLRSTHPHFVRCIIPNEEKKPG 674 (1930)
T ss_pred CcchhhHHHHHHHHHHHHHHHhccCCCceeEEeccCcccccc
Confidence 477788999999999999999999999999999999887766
No 25
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=57.80 E-value=10 Score=41.23 Aligned_cols=39 Identities=49% Similarity=0.872 Sum_probs=35.0
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCccccccccCCcccc
Q psy3667 77 GMFRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKR 115 (266)
Q Consensus 77 v~Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~ 115 (266)
....|.|..+|++++.||+.|.++.++|||++-|+..++
T Consensus 602 ~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~~K~ 640 (1463)
T COG5022 602 GRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNEEKS 640 (1463)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCcccC
Confidence 566789999999999999999999999999999987653
No 26
>PTZ00014 myosin-A; Provisional
Probab=49.07 E-value=18 Score=37.75 Aligned_cols=37 Identities=35% Similarity=0.741 Sum_probs=32.5
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+.+..++++++.||..|.+|.++||+++-|+..++.
T Consensus 638 ~tv~s~Fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p 674 (821)
T PTZ00014 638 QLIGSQFLNQLDSLMSLINSTEPHFIRCIKPNENKKP 674 (821)
T ss_pred CcHHHHHHHHHHHHHHHHhccCCeEEEEeCcCcccCc
Confidence 4567788999999999999999999999999887654
No 27
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=44.10 E-value=27 Score=35.90 Aligned_cols=40 Identities=38% Similarity=0.595 Sum_probs=34.5
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 77 GMFRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 77 v~Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
....+++..++.+++.||..|.++.++||+++-|+..++.
T Consensus 584 ~~~~tv~~~fk~qL~~Lm~~L~~t~~hfIRCIKPN~~k~p 623 (717)
T cd01382 584 LSFISVGNKFKTQLNLLLEKLRSTGSSFIRCIKPNLKMVS 623 (717)
T ss_pred ccCccHHHHHHHHHHHHHHHHhccCCeeeeeeCCCcccCC
Confidence 3455778889999999999999999999999999886654
No 28
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=42.01 E-value=26 Score=35.74 Aligned_cols=37 Identities=32% Similarity=0.532 Sum_probs=32.8
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+++..++.+++.||..|.+|.++||+++-|+..++.
T Consensus 542 ~tv~~~fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p 578 (674)
T cd01378 542 TTAGFKIKTSANALVETLMKCTPHYIRCIKPNETKSP 578 (674)
T ss_pred CcHHHHHHHHHHHHHHHHHccCCeEEEEECCCccCCc
Confidence 4677889999999999999999999999999886654
No 29
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=39.24 E-value=28 Score=36.03 Aligned_cols=36 Identities=31% Similarity=0.523 Sum_probs=31.8
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCcccc
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKR 115 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~ 115 (266)
.+.+..++.+++.||..|.++.++||+++-|+..++
T Consensus 609 ~tv~~qFk~qL~~Lm~~L~~t~phfIRCIKPN~~k~ 644 (767)
T cd01386 609 KSPCVQVKLQVDALIDTLRRSGLHFVHCYLPQHNGG 644 (767)
T ss_pred ccHHHHHHHHHHHHHHHHhccCCeeEEEeCcccccc
Confidence 456778999999999999999999999999988654
No 30
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=39.21 E-value=32 Score=35.06 Aligned_cols=38 Identities=39% Similarity=0.788 Sum_probs=33.1
Q ss_pred ccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 79 FRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 79 Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
..+.+..++.+++.||..|.++.++||+++-|+..++.
T Consensus 541 ~~tv~~~fk~~L~~L~~~L~~t~~hfIRCIKPN~~k~p 578 (674)
T cd01384 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKP 578 (674)
T ss_pred cccHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCC
Confidence 45677788999999999999999999999999886654
No 31
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=39.17 E-value=32 Score=35.17 Aligned_cols=38 Identities=47% Similarity=0.807 Sum_probs=33.0
Q ss_pred ccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 79 FRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 79 Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
-.+++..++.+++.||..|.++.++||+++-|+..++.
T Consensus 560 ~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~ 597 (691)
T cd01380 560 KPTVGSQFKSSLIELMSTLNSTNPHYIRCIKPNDEKKP 597 (691)
T ss_pred CCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCc
Confidence 34677788999999999999999999999999886654
No 32
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=38.15 E-value=34 Score=34.94 Aligned_cols=38 Identities=45% Similarity=0.713 Sum_probs=33.2
Q ss_pred ccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 79 FRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 79 Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
-.+.+..++.+++.||..|..+.++||+++-|+..++.
T Consensus 547 ~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~p 584 (677)
T cd01383 547 KLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLP 584 (677)
T ss_pred CcchHHHHHHHHHHHHHHHhCCCCeEEEEECcccccCc
Confidence 45778889999999999999999999999999876654
No 33
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=34.69 E-value=43 Score=34.29 Aligned_cols=37 Identities=43% Similarity=0.662 Sum_probs=32.3
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+++..++.+++.||..|.++.++||+++-|+..++.
T Consensus 561 ~tV~~~f~~~L~~L~~~L~~t~~hfIRCIKPN~~k~p 597 (692)
T cd01385 561 PSVSAQFQTSLNKLMETLGKAEPFFIRCIKSNAEKIE 597 (692)
T ss_pred CcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCCccCc
Confidence 4667778899999999999999999999999887654
No 34
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=34.47 E-value=42 Score=34.21 Aligned_cols=38 Identities=61% Similarity=1.003 Sum_probs=33.1
Q ss_pred ccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 79 FRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 79 Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
..+++..++.+++.||..|.++.++||+++-|+..++.
T Consensus 544 ~~tv~~~fk~~L~~L~~~l~~t~~hfIRCIKPN~~k~~ 581 (677)
T smart00242 544 FRTVGSQFKESLNKLMDTLNSTNPHFIRCIKPNEEKKP 581 (677)
T ss_pred CCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCc
Confidence 45677888999999999999999999999999886654
No 35
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=34.14 E-value=37 Score=34.56 Aligned_cols=37 Identities=41% Similarity=0.666 Sum_probs=32.1
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+.+..++.+++.||..|.++.++||+++-|+..++.
T Consensus 539 ~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~ 575 (671)
T cd01381 539 PTLSSQFRRSLDLLMRTLSSCQPFFIRCIKPNEYKEP 575 (671)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCeEEEEeCcchhhcc
Confidence 4667788999999999999999999999999876554
No 36
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=33.80 E-value=43 Score=33.99 Aligned_cols=37 Identities=35% Similarity=0.724 Sum_probs=31.7
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+++..++.++.+||..|.++.++||+++-|+..+..
T Consensus 525 ~tv~~~fr~~l~~L~~~l~~t~~hfIRCIKPN~~k~~ 561 (653)
T cd01379 525 QTVASYFRYSLMDLLSKMVVGQPHFVRCIKPNEDRQA 561 (653)
T ss_pred cHHHHHHHHHHHHHHHHHhccCCceEEeeCCCcccCc
Confidence 4566778889999999999999999999999887654
No 37
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=33.75 E-value=45 Score=34.04 Aligned_cols=37 Identities=38% Similarity=0.739 Sum_probs=32.1
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+++..++++++.||..|..+.++||+++-|+..++.
T Consensus 547 ~tv~~~f~~sL~~L~~~l~~t~phfIRCIKPN~~k~~ 583 (677)
T cd01387 547 HTVAAKFQQSLLDLVEKMERCNPLFVRCLKPNHKKEP 583 (677)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCCcCCc
Confidence 4667778899999999999999999999999887654
No 38
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=33.21 E-value=46 Score=34.04 Aligned_cols=37 Identities=81% Similarity=1.225 Sum_probs=32.8
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
.+++..++.++..||..|.++.++||+++-|+..+..
T Consensus 562 ~tv~~~F~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p 598 (693)
T cd01377 562 RTVSQLYKEQLNKLMTTLRSTNPHFVRCIIPNEEKKP 598 (693)
T ss_pred ccHHHHHHHHHHHHHHHHhccCCeEEEEeCcCccCCC
Confidence 5678889999999999999999999999999886654
No 39
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=31.46 E-value=51 Score=33.58 Aligned_cols=40 Identities=43% Similarity=0.736 Sum_probs=34.3
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCccccccccCCccccC
Q psy3667 77 GMFRTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKRA 116 (266)
Q Consensus 77 v~Y~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~~ 116 (266)
....+.+..++.+++.||..|.++.++||+++-|+..++.
T Consensus 546 ~~~~tv~~~f~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p 585 (679)
T cd00124 546 KKGQTVGSQFRTSLDALMATLNSTEPHFIRCIKPNEEKKP 585 (679)
T ss_pred cCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCcccCC
Confidence 3456778888999999999999999999999999887654
No 40
>KOG0164|consensus
Probab=20.54 E-value=1e+02 Score=31.72 Aligned_cols=36 Identities=39% Similarity=0.769 Sum_probs=31.5
Q ss_pred cchhHHHHHHHHHHHHHHhccCccccccccCCcccc
Q psy3667 80 RTVSQLYKEQLTKLMVTLRNTNPNFVRCIIPNHEKR 115 (266)
Q Consensus 80 ~~~~~l~k~~l~~l~~~L~~s~~~fv~~lf~~~~~~ 115 (266)
.+.|.++|+++..||..|.+..+.+|+++-|+..+.
T Consensus 559 ~Tagt~Fk~Sm~~Lv~nL~sKeP~YvRcikPNe~k~ 594 (1001)
T KOG0164|consen 559 PTAGTLFKNSMAALVKNLASKEPNYVRCIKPNEHKQ 594 (1001)
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCeEEeeccccccC
Confidence 467899999999999999999999999999887543
Done!