Your job contains 1 sequence.
>psy3671
LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDIPNKRDKPSDVNGSV
GKEVKSKTHTFYQVLIDSRDCPYIRAQTEAVTFLGNQNSNKSLYAIPGLDYVAHEDILPY
SCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETTENVRVT
VIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRGVVGQ
EPVLSKSLPAFQYSSHVSLQAPSGHM
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3671
(266 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037329 - symbol:CG12162 species:7227 "Drosophila ... 974 1.4e-114 2
ZFIN|ZDB-GENE-040212-1 - symbol:smtnl "smoothelin, like" ... 1036 1.2e-104 1
ZFIN|ZDB-GENE-030131-5881 - symbol:poldip2 "polymerase (D... 1035 1.6e-104 1
UNIPROTKB|I3LMX3 - symbol:POLDIP2 "Uncharacterized protei... 1032 3.2e-104 1
UNIPROTKB|A5D9H9 - symbol:POLDIP2 "Polymerase (DNA-direct... 1029 6.7e-104 1
UNIPROTKB|E2QVV7 - symbol:POLDIP2 "Uncharacterized protei... 1029 6.7e-104 1
MGI|MGI:1915061 - symbol:Poldip2 "polymerase (DNA-directe... 1029 6.7e-104 1
UNIPROTKB|Q9Y2S7 - symbol:POLDIP2 "Polymerase delta-inter... 1028 8.6e-104 1
UNIPROTKB|F1NNL9 - symbol:TSR1 "Uncharacterized protein" ... 1027 1.1e-103 1
RGD|1307022 - symbol:Poldip2 "polymerase (DNA-directed), ... 1024 2.3e-103 1
WB|WBGene00022787 - symbol:tag-307 species:6239 "Caenorha... 341 5.4e-31 1
UNIPROTKB|Q2GFG4 - symbol:apaG "Protein ApaG" species:205... 176 1.6e-13 1
TIGR_CMR|ECH_1033 - symbol:ECH_1033 "apaG protein" specie... 176 1.6e-13 1
UNIPROTKB|Q0BYU0 - symbol:apaG "ApaG protein" species:228... 173 3.4e-13 1
UNIPROTKB|Q2GIY5 - symbol:apaG "ApaG protein" species:212... 164 4.0e-12 1
TIGR_CMR|APH_1120 - symbol:APH_1120 "apaG protein" specie... 164 4.0e-12 1
UNIPROTKB|Q8EB92 - symbol:apaG "Protein ApaG" species:211... 149 2.3e-10 1
TIGR_CMR|SO_3640 - symbol:SO_3640 "apaG protein" species:... 149 2.3e-10 1
UNIPROTKB|Q9KUS3 - symbol:apaG "Protein ApaG" species:243... 126 9.3e-08 1
TIGR_CMR|VC_0442 - symbol:VC_0442 "apaG protein" species:... 126 9.3e-08 1
UNIPROTKB|Q60C69 - symbol:apaG "Protein ApaG" species:243... 125 1.2e-07 1
UNIPROTKB|A6H7H7 - symbol:FBXO3 "F-box only protein 3" sp... 127 2.1e-05 1
UNIPROTKB|Q9UK99 - symbol:FBXO3 "F-box only protein 3" sp... 127 2.1e-05 1
MGI|MGI:1929084 - symbol:Fbxo3 "F-box protein 3" species:... 126 2.9e-05 1
RGD|1593433 - symbol:Fbxo3 "F-box protein 3" species:1011... 126 2.9e-05 1
ZFIN|ZDB-GENE-050522-269 - symbol:fbxo3 "F-box protein 3"... 113 0.00078 1
>FB|FBgn0037329 [details] [associations]
symbol:CG12162 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR011722
SMART:SM00992 EMBL:AE014297 GO:GO:0003677 eggNOG:COG2967
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GeneTree:ENSGT00390000010198
RefSeq:NP_730934.1 UniGene:Dm.23300 ProteinModelPortal:Q8IPQ6
SMR:Q8IPQ6 PaxDb:Q8IPQ6 PRIDE:Q8IPQ6 EnsemblMetazoa:FBtr0078681
GeneID:40655 KEGG:dme:Dmel_CG12162 UCSC:CG12162-RB
FlyBase:FBgn0037329 InParanoid:Q8IPQ6 OMA:YDRDLHN OrthoDB:EOG47M0D7
PhylomeDB:Q8IPQ6 ChiTaRS:CG12162 GenomeRNAi:40655 NextBio:819872
ArrayExpress:Q8IPQ6 Bgee:Q8IPQ6 Uniprot:Q8IPQ6
Length = 431
Score = 974 (347.9 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 175/205 (85%), Positives = 188/205 (91%)
Query: 62 KEVKSKTHTFYQVLIDSRDCPYIRAQTEAVTFLGNQNSNKSLYAIPGLDYVAHEDILPYS 121
KEVK K TFYQVLID+RDCPYIRAQTEAVTFLGNQ+SN+SLYAIPGLDYVAHEDI+PYS
Sbjct: 178 KEVKGKVQTFYQVLIDTRDCPYIRAQTEAVTFLGNQDSNRSLYAIPGLDYVAHEDIMPYS 237
Query: 122 CSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETTENVRVTV 181
S + PL HELFDKFL H PD DPPFV Q TL+ WQ KNHPWL++SDVHKETTENVR+TV
Sbjct: 238 SSEKSPLQHELFDKFLTHAPDADPPFVGQDTLKAWQEKNHPWLDMSDVHKETTENVRITV 297
Query: 182 IPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRGVVGQE 241
IPFYMGCR++P SSVYWWRYCIRLENLGEL+VQLRERHWRIFSLSGTLETVRGRGVVGQE
Sbjct: 298 IPFYMGCRETPASSVYWWRYCIRLENLGELSVQLRERHWRIFSLSGTLETVRGRGVVGQE 357
Query: 242 PVLSKSLPAFQYSSHVSLQAPSGHM 266
P+LS LPAFQYSSHVSLQAPSGHM
Sbjct: 358 PILSPRLPAFQYSSHVSLQAPSGHM 382
Score = 176 (67.0 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDIPN 48
LAE+G+L + +Y TGQLFLHR+FGYRG++LFPW ARVYDRD+ N
Sbjct: 59 LAEVGRLVDAR-DDRYETGQLFLHRIFGYRGVILFPWTARVYDRDLHN 105
>ZFIN|ZDB-GENE-040212-1 [details] [associations]
symbol:smtnl "smoothelin, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003779 "actin
binding" evidence=IDA] [GO:0043009 "chordate embryonic development"
evidence=IMP] InterPro:IPR001715 InterPro:IPR011722 Pfam:PF00307
PROSITE:PS50021 SMART:SM00033 SMART:SM00992 ZFIN:ZDB-GENE-040212-1
GO:GO:0003779 GO:GO:0003677 Gene3D:1.10.418.10 SUPFAM:SSF47576
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0043009
GeneTree:ENSGT00530000062761 SUPFAM:SSF141255 EMBL:CR524483
EMBL:CR457447 IPI:IPI00993558 Ensembl:ENSDART00000130370
Bgee:E7F6Q9 Uniprot:E7F6Q9
Length = 766
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 190/269 (70%), Positives = 219/269 (81%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI-PNKRDKPSDVNGS 59
L +G + K GKY TGQLFLH VFGYRGIVLFPW AR+YDRD+ P D D G
Sbjct: 460 LEAVGVFEALKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVSPATTDSKPDSTGH 519
Query: 60 VGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAHEDI 117
KEVK K HT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+HEDI
Sbjct: 520 GSKEVKGKMHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDI 579
Query: 118 LPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETTENV 177
LPY+ + + P+ HELF++FL+ P ++PPF A+ TLR WQ KNHPWLELSDVH+ETTEN+
Sbjct: 580 LPYNSTEQVPIQHELFERFLMFNPSRNPPFTARDTLRAWQEKNHPWLELSDVHRETTENI 639
Query: 178 RVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRGV 237
RVTVIPFYMG R++ S VYWWRYCIRLENLG VQLRERHWRIFSLSGTLETVRGRGV
Sbjct: 640 RVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGV 699
Query: 238 VGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
VG+EPVLS+ PAFQYSSHVSLQAPSGHM
Sbjct: 700 VGKEPVLSREQPAFQYSSHVSLQAPSGHM 728
>ZFIN|ZDB-GENE-030131-5881 [details] [associations]
symbol:poldip2 "polymerase (DNA-directed), delta
interacting protein 2" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
ZFIN:ZDB-GENE-030131-5881 GO:GO:0003677 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
SUPFAM:SSF141255 HOVERGEN:HBG053549 EMBL:BC045382 IPI:IPI00817709
UniGene:Dr.78022 ProteinModelPortal:Q7ZVW6 InParanoid:Q7ZVW6
ArrayExpress:Q7ZVW6 Uniprot:Q7ZVW6
Length = 376
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 190/269 (70%), Positives = 218/269 (81%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI-PNKRDKPSDVNGS 59
L +G + K GKY TGQLFLH VFGYRGIVLFPW AR+YDRD+ P D D G
Sbjct: 70 LEAVGVFEALKQHGKYETGQLFLHSVFGYRGIVLFPWHARLYDRDVSPATTDSKPDSTGH 129
Query: 60 VGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAHEDI 117
KEVK K HT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+HEDI
Sbjct: 130 GSKEVKGKMHTYYQVLIDTRDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDI 189
Query: 118 LPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETTENV 177
LPY+ + + P+ HELF++FL+ P + PPF A+ TLR WQ KNHPWLELSDVH+ETTEN+
Sbjct: 190 LPYNSTEQVPIQHELFERFLMFNPSRSPPFTARDTLRAWQEKNHPWLELSDVHRETTENI 249
Query: 178 RVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRGV 237
RVTVIPFYMG R++ S VYWWRYCIRLENLG VQLRERHWRIFSLSGTLETVRGRGV
Sbjct: 250 RVTVIPFYMGMREAQNSHVYWWRYCIRLENLGNEVVQLRERHWRIFSLSGTLETVRGRGV 309
Query: 238 VGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
VG+EPVLS+ PAFQYSSHVSLQAPSGHM
Sbjct: 310 VGKEPVLSREQPAFQYSSHVSLQAPSGHM 338
>UNIPROTKB|I3LMX3 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070584 "mitochondrion morphogenesis" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:FP565711
Ensembl:ENSSSCT00000023831 Uniprot:I3LMX3
Length = 370
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 193/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH VFGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 64 LETVGVFEVPKQNGKYETGQLFLHSVFGYRGVVLFPWQARLYDRDVASAAPEKAENPAG- 122
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 123 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 180
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPYS + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 181 EDILPYSSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 240
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
EN+RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 241 ENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 300
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 301 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 332
>UNIPROTKB|A5D9H9 [details] [associations]
symbol:POLDIP2 "Polymerase (DNA-directed), delta
interacting protein 2" species:9913 "Bos taurus" [GO:0070584
"mitochondrion morphogenesis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 HOVERGEN:HBG053549
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 OMA:LFERFLM
OrthoDB:EOG441QBM EMBL:DAAA02048600 EMBL:BC146200 EMBL:BT030598
IPI:IPI00694541 RefSeq:NP_001091572.1 UniGene:Bt.56102
Ensembl:ENSBTAT00000010675 GeneID:539673 KEGG:bta:539673
InParanoid:A5D9H9 NextBio:20878145 Uniprot:A5D9H9
Length = 368
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 192/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH VFGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 62 LETVGVFEVPKQNGKYETGQLFLHSVFGYRGVVLFPWQARLYDRDVASAAPEKAENPAG- 120
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 121 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 178
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPY+ + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 179 EDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 238
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
EN+RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 239 ENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 298
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 299 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 330
>UNIPROTKB|E2QVV7 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 GeneTree:ENSGT00390000010198 OMA:LFERFLM
EMBL:AAEX03006664 RefSeq:NP_001240832.1 UniGene:Cfa.26302
UniGene:Cfa.42286 Ensembl:ENSCAFT00000029631 GeneID:491162
KEGG:cfa:491162 NextBio:20864045 Uniprot:E2QVV7
Length = 368
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 192/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH VFGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 62 LETVGVFEVPKQNGKYETGQLFLHSVFGYRGVVLFPWQARLYDRDVASAAPEKAENPAG- 120
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 121 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 178
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPY+ + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 179 EDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 238
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
EN+RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 239 ENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 298
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 299 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 330
>MGI|MGI:1915061 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0030674 "protein binding,
bridging" evidence=ISA] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO] [GO:0070584 "mitochondrion morphogenesis"
evidence=IMP] InterPro:IPR011722 SMART:SM00992 MGI:MGI:1915061
GO:GO:0005739 GO:GO:0005634 GO:GO:0003677 GO:GO:0030674
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
CTD:26073 HOVERGEN:HBG053549 EMBL:BC006833 EMBL:BC012879
IPI:IPI00126634 RefSeq:NP_080665.1 UniGene:Mm.197493
UniGene:Mm.473921 ProteinModelPortal:Q91VA6 SMR:Q91VA6
STRING:Q91VA6 PhosphoSite:Q91VA6 PaxDb:Q91VA6 PRIDE:Q91VA6
Ensembl:ENSMUST00000001127 GeneID:67811 KEGG:mmu:67811
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 InParanoid:Q91VA6
OMA:LFERFLM OrthoDB:EOG441QBM ChiTaRS:POLDIP2 NextBio:325615
Bgee:Q91VA6 Genevestigator:Q91VA6 GermOnline:ENSMUSG00000001100
Uniprot:Q91VA6
Length = 368
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 192/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH VFGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 62 LETVGVFEVPKQNGKYETGQLFLHSVFGYRGVVLFPWQARLYDRDVASATPEKAENPAG- 120
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 121 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 178
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPY+ + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 179 EDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 238
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
EN+RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 239 ENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 298
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 299 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 330
>UNIPROTKB|Q9Y2S7 [details] [associations]
symbol:POLDIP2 "Polymerase delta-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR011722 SMART:SM00992 EMBL:AF179891 GO:GO:0005634
GO:GO:0003677 GO:GO:0042645 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 CleanEx:HS_POLD4
SUPFAM:SSF141255 EMBL:AF077203 EMBL:AK313232 EMBL:BC000655
EMBL:BC009265 IPI:IPI00165506 RefSeq:NP_056399.1 UniGene:Hs.241543
ProteinModelPortal:Q9Y2S7 SMR:Q9Y2S7 IntAct:Q9Y2S7
MINT:MINT-1383241 PhosphoSite:Q9Y2S7 DMDM:50401206 PRIDE:Q9Y2S7
DNASU:26073 GeneID:26073 KEGG:hsa:26073 UCSC:uc002haz.3 CTD:26073
GeneCards:GC17M026673 HGNC:HGNC:23781 MIM:611519 neXtProt:NX_Q9Y2S7
PharmGKB:PA134866227 HOVERGEN:HBG053549 InParanoid:Q9Y2S7
GenomeRNAi:26073 NextBio:47983 CleanEx:HS_POLDIP2
Genevestigator:Q9Y2S7 GermOnline:ENSG00000004142 Uniprot:Q9Y2S7
Length = 368
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 191/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH +FGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 62 LETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASAAPEKAENPAG- 120
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 121 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 178
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPY+ + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 179 EDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 238
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
EN+RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 239 ENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 298
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 299 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 330
>UNIPROTKB|F1NNL9 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:AADN02025881
IPI:IPI00883100 Ensembl:ENSGALT00000005087 Uniprot:F1NNL9
Length = 349
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 191/269 (71%), Positives = 220/269 (81%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDIPNK-RDKPSDVNGS 59
L +G + PK GKY TGQLFLH VFGYRGIVLFPW AR+YDRD+ + +K +V G
Sbjct: 43 LETVGVFEAPKQHGKYETGQLFLHSVFGYRGIVLFPWQARLYDRDVASPVTEKSENVAGH 102
Query: 60 VGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAHEDI 117
KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+HEDI
Sbjct: 103 GSKEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDI 162
Query: 118 LPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETTENV 177
LPYS + + P+ HELF++FL++ K PPFVA+ TL WQ KNHPWLELSDVH+ETTEN+
Sbjct: 163 LPYSSTDQVPIQHELFERFLMYDQTKVPPFVARDTLCAWQEKNHPWLELSDVHRETTENI 222
Query: 178 RVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRGV 237
RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRGRGV
Sbjct: 223 RVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSEVVQLRERHWRIFSLSGTLETVRGRGV 282
Query: 238 VGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
VG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 283 VGREPVLSKEQPAFQYSSHVSLQASSGHM 311
>RGD|1307022 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 IPI:IPI01007599 Ensembl:ENSRNOT00000013100
Uniprot:E9PT51
Length = 367
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 191/272 (70%), Positives = 224/272 (82%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDI----PNKRDKPSDV 56
L +G + PK GKY TGQLFLH VFGYRG+VLFPW AR+YDRD+ P K + P+
Sbjct: 61 LETVGVFEVPKQNGKYETGQLFLHSVFGYRGVVLFPWQARLYDRDVASAAPEKAENPAG- 119
Query: 57 NGSVGKEVKSKTHTFYQVLIDSRDCPYI--RAQTEAVTFLGNQNSNKSLYAIPGLDYVAH 114
+GS KEVK KTHT+YQVLID+RDCP+I R+QTEAVTFL N + +++LYAIPGLDYV+H
Sbjct: 120 HGS--KEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSH 177
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPFVAQQTLRTWQRKNHPWLELSDVHKETT 174
EDILPY+ + + P+ HELF++FL++ K PPFVA++TLR WQ KNHPWLELSDVH+ETT
Sbjct: 178 EDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETT 237
Query: 175 ENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRG 234
E++RVTVIPFYMG R++ S VYWWRYCIRLENL VQLRERHWRIFSLSGTLETVRG
Sbjct: 238 ESIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRG 297
Query: 235 RGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
RGVVG+EPVLSK PAFQYSSHVSLQA SGHM
Sbjct: 298 RGVVGREPVLSKEQPAFQYSSHVSLQASSGHM 329
>WB|WBGene00022787 [details] [associations]
symbol:tag-307 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008340 "determination
of adult lifespan" evidence=IMP] InterPro:IPR011722 Pfam:PF08755
SMART:SM00992 GO:GO:0008340 GO:GO:0003677 eggNOG:COG2967
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:FO080278
GeneTree:ENSGT00390000010198 RefSeq:NP_498703.2 UniGene:Cel.23368
ProteinModelPortal:Q95PW5 SMR:Q95PW5 STRING:Q95PW5 PaxDb:Q95PW5
EnsemblMetazoa:ZK652.10 GeneID:176098 KEGG:cel:CELE_ZK652.10
UCSC:ZK652.10 CTD:176098 WormBase:ZK652.10 HOGENOM:HOG000019603
InParanoid:Q95PW5 OMA:QETTENI NextBio:891108 Uniprot:Q95PW5
Length = 342
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 91/277 (32%), Positives = 145/277 (52%)
Query: 1 LAEIGKLDTPKVQGKYSTGQLFLHRVFGYRGIVLFPWLARVYDRDIPNKRDKPSDVNGSV 60
L EIG L + + GQ+F+H+ F Y+G+V+ + R+++ KR + ++
Sbjct: 40 LKEIGLLLPSTNKPTFEAGQIFIHKTFAYKGVVVCSFPCRLHE-----KRSQQNE----- 89
Query: 61 GKEVKSKTHTFYQVLIDSRDCPYIRAQTEAVTFL------GNQNSNKSLYAIPGLDYVAH 114
K + T FYQVLI D ++ + ++L ++ K L I G+D V+H
Sbjct: 90 -KHLL--TRDFYQVLIHRYDWSHMGFPVDITSYLVDAPMENKRHGQKMLTLINGMDCVSH 146
Query: 115 EDILPYSCSHEQPLHHELFDKFLVHMPDKDPPF-VAQ--QTLRTWQRKNHPWLELSDVHK 171
EDI+P++ S H+LFD D + +A + + + N WL DV++
Sbjct: 147 EDIIPFTPSGGVNFDHDLFDHIFNASHDGIGLYDIAMKPELVERYTNPNRSWLGPRDVYR 206
Query: 172 ETTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLG-ELTVQLRERHWRIFSLSGTLE 230
E TEN+ VTV+ FY+G + WRY IR+EN E V LRER +++SL+ +
Sbjct: 207 ERTENIEVTVMTFYLGANMVGGQQQHMWRYVIRIENKKPENGVILRERTLKVYSLNN-MN 265
Query: 231 TVRGRGVVGQEPVLSKSLPAFQYSSHVSLQ-APSGHM 266
+ G GVVG++P L+ + PAFQ+SS + L+ GHM
Sbjct: 266 QMHGHGVVGKQPELNAATPAFQFSSTLELKHTKGGHM 302
>UNIPROTKB|Q2GFG4 [details] [associations]
symbol:apaG "Protein ApaG" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 174 TENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVR 233
T+ + V V+P Y+ + +P + Y W Y IR++N TVQL R W+I +G + V
Sbjct: 9 TKLIEVKVVPSYLEEQSAPHENCYIWLYNIRVKNKSNSTVQLLRRSWKIIDSTGVINEVT 68
Query: 234 GRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
G GV+G++PVL K F+Y+S L PSG M
Sbjct: 69 GLGVIGKQPVL-KPGEFFEYTSGAYLSTPSGMM 100
>TIGR_CMR|ECH_1033 [details] [associations]
symbol:ECH_1033 "apaG protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 37/93 (39%), Positives = 54/93 (58%)
Query: 174 TENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVR 233
T+ + V V+P Y+ + +P + Y W Y IR++N TVQL R W+I +G + V
Sbjct: 9 TKLIEVKVVPSYLEEQSAPHENCYIWLYNIRVKNKSNSTVQLLRRSWKIIDSTGVINEVT 68
Query: 234 GRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
G GV+G++PVL K F+Y+S L PSG M
Sbjct: 69 GLGVIGKQPVL-KPGEFFEYTSGAYLSTPSGMM 100
>UNIPROTKB|Q0BYU0 [details] [associations]
symbol:apaG "ApaG protein" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CP000158
GenomeReviews:CP000158_GR RefSeq:YP_761353.1
ProteinModelPortal:Q0BYU0 STRING:Q0BYU0 GeneID:4288594
KEGG:hne:HNE_2671 PATRIC:32218209
BioCyc:HNEP228405:GI69-2681-MONOMER Uniprot:Q0BYU0
Length = 138
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 170 HKETTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTL 229
++ T+ VR+ V P ++ PT + + W+Y + +EN + T + RHWRI +G L
Sbjct: 10 YEAITDGVRIRVRPKFLHDESEPTRAKFMWQYTVEVENESDRTWTIIRRHWRIVDSAGRL 69
Query: 230 ETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+ V G GV+GQ P + F Y+S L PSG M
Sbjct: 70 QAVDGEGVIGQTPTVGPG-QRFSYTSGAPLATPSGMM 105
>UNIPROTKB|Q2GIY5 [details] [associations]
symbol:apaG "ApaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 177 VRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRG 236
+ V V P Y+ P + Y W Y +R+ N + TVQL +R W+I G + V G G
Sbjct: 13 IEVEVTPSYLEEHSIPHENCYIWLYSVRINNRSDSTVQLLKRSWKIIDSKGVVNEVSGSG 72
Query: 237 VVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
V G +PVL K F+Y+S L PSG M
Sbjct: 73 VAGSQPVL-KPGAFFEYTSGTCLSTPSGVM 101
>TIGR_CMR|APH_1120 [details] [associations]
symbol:APH_1120 "apaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 164 (62.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 177 VRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRG 236
+ V V P Y+ P + Y W Y +R+ N + TVQL +R W+I G + V G G
Sbjct: 13 IEVEVTPSYLEEHSIPHENCYIWLYSVRINNRSDSTVQLLKRSWKIIDSKGVVNEVSGSG 72
Query: 237 VVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
V G +PVL K F+Y+S L PSG M
Sbjct: 73 VAGSQPVL-KPGAFFEYTSGTCLSTPSGVM 101
>UNIPROTKB|Q8EB92 [details] [associations]
symbol:apaG "Protein ApaG" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 176 NVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGR 235
++RV V Y+ + SP Y + Y I + NLGE +L RHW I +G V+G
Sbjct: 7 SIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGA 66
Query: 236 GVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
GVVG+ P + + A+QY+S L P G M
Sbjct: 67 GVVGETPTIPPNT-AYQYTSGTVLDTPFGIM 96
>TIGR_CMR|SO_3640 [details] [associations]
symbol:SO_3640 "apaG protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 149 (57.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 176 NVRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGR 235
++RV V Y+ + SP Y + Y I + NLGE +L RHW I +G V+G
Sbjct: 7 SIRVEVKTEYIEQQSSPEDEKYLFSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGA 66
Query: 236 GVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
GVVG+ P + + A+QY+S L P G M
Sbjct: 67 GVVGETPTIPPNT-AYQYTSGTVLDTPFGIM 96
>UNIPROTKB|Q9KUS3 [details] [associations]
symbol:apaG "Protein ApaG" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1
PDB:1XVS PDBsum:1XVS ProteinModelPortal:Q9KUS3 SMR:Q9KUS3
DNASU:2615774 GeneID:2615774 KEGG:vch:VC0442 PATRIC:20079963
EvolutionaryTrace:Q9KUS3 Uniprot:Q9KUS3
Length = 126
Score = 126 (49.4 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 177 VRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRG 236
+++ V Y+ + +P + + Y I ++NL TVQL R W I G V G G
Sbjct: 8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDG 67
Query: 237 VVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
VVG++P + K+ + YSS +L P G M
Sbjct: 68 VVGEQPRI-KANDEYTYSSGTALDTPVGVM 96
>TIGR_CMR|VC_0442 [details] [associations]
symbol:VC_0442 "apaG protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967 KO:K06195
OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1 PDB:1XVS PDBsum:1XVS
ProteinModelPortal:Q9KUS3 SMR:Q9KUS3 DNASU:2615774 GeneID:2615774
KEGG:vch:VC0442 PATRIC:20079963 EvolutionaryTrace:Q9KUS3
Uniprot:Q9KUS3
Length = 126
Score = 126 (49.4 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 177 VRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSGTLETVRGRG 236
+++ V Y+ + +P + + Y I ++NL TVQL R W I G V G G
Sbjct: 8 IKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDG 67
Query: 237 VVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
VVG++P + K+ + YSS +L P G M
Sbjct: 68 VVGEQPRI-KANDEYTYSSGTALDTPVGVM 96
>UNIPROTKB|Q60C69 [details] [associations]
symbol:apaG "Protein ApaG" species:243233 "Methylococcus
capsulatus str. Bath" [GO:0003674 "molecular_function" evidence=ND]
EMBL:AE017282 RefSeq:YP_112776.1 HSSP:Q7VU61
ProteinModelPortal:Q60C69 SMR:Q60C69 GeneID:3104089
GenomeReviews:AE017282_GR KEGG:mca:MCA0241 PATRIC:22604217
eggNOG:COG2967 HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT
ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 Uniprot:Q60C69
Length = 126
Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 177 VRVTVIPFYMGCRDSPTSSVYWWRYCIRLENLGELTVQLRERHWRIFSLSG-TLETVRGR 235
++V V Y+ P + Y + Y + +EN G + +L R W I +G T+E V G
Sbjct: 8 LKVEVKAVYLREHSRPDAHQYTFAYTVTMENTGTVPAKLLGRRWIITDANGKTVEVV-GE 66
Query: 236 GVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
GVVG+ P L AF+Y+S ++ P G M
Sbjct: 67 GVVGEHPYLRPG-EAFEYTSAATIATPVGSM 96
>UNIPROTKB|A6H7H7 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005634 SUPFAM:SSF81383
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:BC146250 IPI:IPI00690261
RefSeq:NP_001092532.1 UniGene:Bt.91417 ProteinModelPortal:A6H7H7
Ensembl:ENSBTAT00000013287 GeneID:534287 KEGG:bta:534287 CTD:26273
GeneTree:ENSGT00390000009225 HOGENOM:HOG000232174
HOVERGEN:HBG005647 InParanoid:A6H7H7 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 NextBio:20876340 InterPro:IPR018958 SMART:SM00860
Uniprot:A6H7H7
Length = 469
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 173 TTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLEN----LGELTVQLRERHWRIFSLSGT 228
TT ++ V+V ++ S Y++ Y IR+E L E QL R+WRI + G
Sbjct: 280 TTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGD 339
Query: 229 LETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+E V+G GVVG+ P++S ++Y+S + SG+M
Sbjct: 340 VEEVQGPGVVGEFPIISPGR-VYEYTSCTTFSTTSGYM 376
>UNIPROTKB|Q9UK99 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016567 "protein ubiquitination" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 Reactome:REACT_6900 EMBL:CH471064 GO:GO:0006508
SUPFAM:SSF81383 GO:GO:0004842 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
CTD:26273 HOGENOM:HOG000232174 HOVERGEN:HBG005647 KO:K10290
OMA:DLGRYIQ OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860
EMBL:AK001943 EMBL:AK128454 EMBL:AL136625 EMBL:AC113192
EMBL:AL049629 EMBL:BC046110 EMBL:AF176702 IPI:IPI00296789
IPI:IPI00472624 IPI:IPI00969390 RefSeq:NP_036307.2
RefSeq:NP_208385.1 UniGene:Hs.406787 ProteinModelPortal:Q9UK99
SMR:Q9UK99 IntAct:Q9UK99 STRING:Q9UK99 PhosphoSite:Q9UK99
DMDM:145559474 PaxDb:Q9UK99 PRIDE:Q9UK99 DNASU:26273
Ensembl:ENST00000265651 Ensembl:ENST00000448981
Ensembl:ENST00000530401 GeneID:26273 KEGG:hsa:26273 UCSC:uc001muy.3
UCSC:uc001mva.1 UCSC:uc001mvb.1 GeneCards:GC11M033762
HGNC:HGNC:13582 MIM:609089 neXtProt:NX_Q9UK99 PharmGKB:PA28040
InParanoid:Q9UK99 PhylomeDB:Q9UK99 GenomeRNAi:26273 NextBio:48571
ArrayExpress:Q9UK99 Bgee:Q9UK99 CleanEx:HS_FBXO3
Genevestigator:Q9UK99 GermOnline:ENSG00000110429 Uniprot:Q9UK99
Length = 471
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 173 TTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLEN----LGELTVQLRERHWRIFSLSGT 228
TT ++ V+V ++ S Y++ Y IR+E L E QL R+WRI + G
Sbjct: 280 TTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGD 339
Query: 229 LETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+E V+G GVVG+ P++S ++Y+S + SG+M
Sbjct: 340 VEEVQGPGVVGEFPIISPGR-VYEYTSCTTFSTTSGYM 376
>MGI|MGI:1929084 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1929084 GO:GO:0005634
SUPFAM:SSF81383 EMBL:CH466519 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
EMBL:BX640578 CTD:26273 GeneTree:ENSGT00390000009225
HOVERGEN:HBG005647 KO:K10290 OMA:DLGRYIQ OrthoDB:EOG4GF3F9
InterPro:IPR018958 SMART:SM00860 EMBL:AF233226 EMBL:AK004544
EMBL:AK019550 EMBL:AK028048 EMBL:AK031428 EMBL:AK049870
EMBL:AK050195 EMBL:AK151130 EMBL:AK151857 EMBL:AK152780
EMBL:AK167075 EMBL:BC010212 EMBL:BC058253 IPI:IPI00120202
IPI:IPI00410808 IPI:IPI00753481 RefSeq:NP_065618.1
RefSeq:NP_997598.1 UniGene:Mm.143768 ProteinModelPortal:Q9DC63
SMR:Q9DC63 STRING:Q9DC63 PhosphoSite:Q9DC63 PaxDb:Q9DC63
PRIDE:Q9DC63 Ensembl:ENSMUST00000028603 Ensembl:ENSMUST00000102565
Ensembl:ENSMUST00000111135 GeneID:57443 KEGG:mmu:57443
UCSC:uc008lji.1 UCSC:uc008ljk.1 InParanoid:Q3U9C1 ChiTaRS:FBXO3
NextBio:313845 Bgee:Q9DC63 CleanEx:MM_FBXO3 Genevestigator:Q9DC63
GermOnline:ENSMUSG00000027180 Uniprot:Q9DC63
Length = 480
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 173 TTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLEN----LGELTVQLRERHWRIFSLSGT 228
TT ++ V+V ++ S Y++ Y IR+E L E QL R+WRI + G
Sbjct: 280 TTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSRDALPEKACQLDSRYWRITNAKGD 339
Query: 229 LETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+E V+G GVVG+ P++S ++Y+S + SG+M
Sbjct: 340 VEEVQGPGVVGEFPIISPGR-IYEYTSCTTFSTTSGYM 376
>RGD|1593433 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 RGD:1593433 GO:GO:0005634
SUPFAM:SSF81383 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CH473949 CTD:26273
GeneTree:ENSGT00390000009225 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860 IPI:IPI00210722
RefSeq:NP_001103076.1 UniGene:Rn.201745 PRIDE:D4ABP9
Ensembl:ENSRNOT00000014478 GeneID:690634 KEGG:rno:690634
UCSC:RGD:1593433 NextBio:741350 Uniprot:D4ABP9
Length = 480
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 173 TTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLEN----LGELTVQLRERHWRIFSLSGT 228
TT ++ V+V ++ S Y++ Y IR+E L E QL R+WRI + G
Sbjct: 280 TTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSRDALPEKACQLDSRYWRITNAKGD 339
Query: 229 LETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+E V+G GVVG+ P++S ++Y+S + SG+M
Sbjct: 340 VEEVQGPGVVGEFPIISPGR-IYEYTSCTTFSTTSGYM 376
>ZFIN|ZDB-GENE-050522-269 [details] [associations]
symbol:fbxo3 "F-box protein 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:BX957256 IPI:IPI00504452
Ensembl:ENSDART00000139382 ZFIN:ZDB-GENE-050522-269
GeneTree:ENSGT00390000009225 Bgee:F1R287 Gene3D:2.60.40.1470
InterPro:IPR007474 InterPro:IPR018958 InterPro:IPR001810
Pfam:PF04379 SMART:SM00256 SMART:SM00860 SUPFAM:SSF110069
SUPFAM:SSF81383 PROSITE:PS51087 PROSITE:PS50181 Uniprot:F1R287
Length = 451
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 173 TTENVRVTVIPFYMGCRDSPTSSVYWWRYCIRLEN----LGELTVQLRERHWRIFSLSGT 228
TT ++ V+V ++ S +++ Y IR+E L E QL R+W+I + +G
Sbjct: 276 TTGDITVSVSTSFLPELSSVHPPHFFFTYRIRIEMAKSALPEKACQLDSRYWKITNANGN 335
Query: 229 LETVRGRGVVGQEPVLSKSLPAFQYSSHVSLQAPSGHM 266
+E VRG GVVG+ PV++ +Y+S + S +M
Sbjct: 336 VEEVRGPGVVGEFPVMTPG-KVHEYASCTTFSTTSEYM 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 266 266 0.00094 114 3 11 22 0.46 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 610 (65 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.34u 0.17s 23.51t Elapsed: 00:00:02
Total cpu time: 23.35u 0.17s 23.52t Elapsed: 00:00:02
Start: Thu Aug 15 13:05:43 2013 End: Thu Aug 15 13:05:45 2013