BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3672
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41564|IDH3G_MACFA Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1
Length = 355
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Q+ S RKKVTAVHKANIMKLGDGLFL C+E+A YP T MI
Sbjct: 167 FKLAQE--SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMI---------- 214
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
V N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 215 ------------VDNTTMQLVSRPQQFDVMVMPNLYGNIVN 243
>sp|P51553|IDH3G_HUMAN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo
sapiens GN=IDH3G PE=1 SV=1
Length = 393
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Q+ S RKKVTAVHKANIMKLGDGLFL C+E+A YP T MI
Sbjct: 205 FKLAQE--SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMI---------- 252
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
V N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 253 ------------VDNTTMQLVSRPQQFDVMVMPNLYGNIVN 281
>sp|Q93353|IDH3B_CAEEL Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C37E2.1 PE=3 SV=1
Length = 379
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 76/147 (51%), Gaps = 27/147 (18%)
Query: 15 CDKVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPV 74
C K+S R + + +F++ + RKKVTAVHKANIMKLGDGLFL +C+ +AK YP
Sbjct: 182 CLKISTRTK--AERIAKFAFDYATKTGRKKVTAVHKANIMKLGDGLFLRTCEGVAKQYPK 239
Query: 75 WTNRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVM 134
MI + N Q+VS P QFDVMVMPNLYGNI D +
Sbjct: 240 IQFESMI----------------------IDNTCMQLVSKPEQFDVMVMPNLYGNIIDNL 277
Query: 135 VMPNLYGNIV---DNLASDSVISRTGS 158
+ G V ++ D VI GS
Sbjct: 278 AAGLVGGAGVVPGQSVGRDFVIFEPGS 304
>sp|Q58CP0|IDH3G_BOVIN Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos
taurus GN=IDH3G PE=2 SV=1
Length = 392
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Q+ S RKKVTAVHKANIMKLGDGLFL C+E+A YP T MI
Sbjct: 204 FQLAQE--SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMI---------- 251
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
V N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 252 ------------VDNTTMQLVSRPQQFDVMVMPNLYGNIVN 280
>sp|P41565|IDHG1_RAT Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Rattus norvegicus GN=Idh3g PE=2 SV=2
Length = 393
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Q+ S RKKVTAVHKANIMKLGDGLFL C+E+A YP T MI
Sbjct: 205 FKLAQE--SGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFDSMI---------- 252
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
V N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 253 ------------VDNTTMQLVSRPQQFDVMVMPNLYGNIVN 281
>sp|P70404|IDHG1_MOUSE Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial
OS=Mus musculus GN=Idh3g PE=1 SV=1
Length = 393
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 58/101 (57%), Gaps = 24/101 (23%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Q+ S RKKVTAVHKANIMKLGDGLFL C+E+A YP T MI
Sbjct: 205 FKLAQE--SGRKKVTAVHKANIMKLGDGLFLQCCREVAAHYPQITFDSMI---------- 252
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
V N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 253 ------------VDNTTMQLVSRPQQFDVMVMPNLYGNIVN 281
>sp|O77784|IDH3B_BOVIN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos
taurus GN=IDH3B PE=2 SV=2
Length = 385
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 25/131 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ R KVTAVHKANIMKLGDGLFL C+E+A+LYP KMI
Sbjct: 199 KFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFEKMI--------- 249
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNL 147
+ N Q+V NP+QFDV+VMPNLYGNI D + + G V ++
Sbjct: 250 -------------IDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 296
Query: 148 ASDSVISRTGS 158
+++ + TG+
Sbjct: 297 SAEYAVFETGA 307
>sp|Q8LFC0|IDH1_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial
OS=Arabidopsis thaliana GN=IDH1 PE=1 SV=2
Length = 367
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 60/100 (60%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
++++ L+NRKKVTAVHKANIMKL DGLFL SC+E+AK YP T ++I
Sbjct: 182 KYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEII--------- 232
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
V N Q+V+ P QFDVMV PNLYGN+
Sbjct: 233 -------------VDNCCMQLVAKPEQFDVMVTPNLYGNL 259
>sp|Q68FX0|IDH3B_RAT Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Rattus norvegicus GN=Idh3B PE=1 SV=1
Length = 385
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ R KVTAVHKANIMKLGDGLFL C+E+A+LYP MI
Sbjct: 199 KFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMI--------- 249
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNL 147
+ N Q+V NP+QFDV+VMPNLYGNI D + + G V ++
Sbjct: 250 -------------IDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 296
Query: 148 ASDSVISRTGS 158
+++ + TG+
Sbjct: 297 SAEYAVFETGA 307
>sp|O43837|IDH3B_HUMAN Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo
sapiens GN=IDH3B PE=1 SV=2
Length = 385
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ R KVTAVHKANIMKLGDGLFL C+E+A+LYP MI
Sbjct: 199 KFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMI--------- 249
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNL 147
+ N Q+V NP+QFDV+VMPNLYGNI D + + G V ++
Sbjct: 250 -------------IDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 296
Query: 148 ASDSVISRTGS 158
+++ + TG+
Sbjct: 297 SAEYAVFETGA 307
>sp|Q28479|IDH3B_MACFA Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial
OS=Macaca fascicularis GN=IDH3B PE=2 SV=2
Length = 385
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 25/131 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ R KVTAVHKANIMKLGDGLFL C+E+A+LYP MI
Sbjct: 199 KFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMI--------- 249
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNL 147
+ N Q+V NP+QFDV+VMPNLYGNI D + + G V ++
Sbjct: 250 -------------IDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 296
Query: 148 ASDSVISRTGS 158
+++ + TG+
Sbjct: 297 SAEYAVFETGA 307
>sp|Q8BPC6|IDHG2_MOUSE Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Mus musculus PE=1 SV=1
Length = 396
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 53/92 (57%), Gaps = 22/92 (23%)
Query: 41 NRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIRR 100
RKKVT VHKANIMKLGDGLFL CK++A YP T MI
Sbjct: 209 GRKKVTVVHKANIMKLGDGLFLQCCKDVAAHYPQITLESMI------------------- 249
Query: 101 IITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
+ N T Q+VS P QFDVMVMPNLYGNI +
Sbjct: 250 ---IDNTTMQLVSKPQQFDVMVMPNLYGNIIN 278
>sp|P93032|IDH2_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial
OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2
Length = 367
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
++++ L+NRKKVTAVHKANIMKL DGLFL SC+E+AK YP ++I
Sbjct: 182 KYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEII--------- 232
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
V N Q+V+ P QFDVMV PNLYGN+
Sbjct: 233 -------------VDNCCMQLVARPEQFDVMVTPNLYGNL 259
>sp|O81796|IDH3_ARATH Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial
OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1
Length = 368
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 59/101 (58%), Gaps = 22/101 (21%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ L+NRKKVTAVHKANIMKL DGLFL SC+E+AK Y +G +
Sbjct: 183 RYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHY---------SGITYNE-- 231
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
I V N Q+V+ P QFDVMV PNLYGN+
Sbjct: 232 -----------IIVDNCCMQLVAKPEQFDVMVTPNLYGNLI 261
>sp|Q5RBT4|IDH3B_PONAB Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo
abelii GN=IDH3B PE=2 SV=1
Length = 385
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 25/131 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ R KV AVHKANIMKLGDGLFL C+E+A+LYP MI
Sbjct: 199 KFAFDYATKKGRSKVIAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMI--------- 249
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNL 147
+ N Q+V NP+QFDV+VMPNLYGNI D + + G V ++
Sbjct: 250 -------------IDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLVGGAGVVPGESY 296
Query: 148 ASDSVISRTGS 158
+++ + TG+
Sbjct: 297 SAEYAVFETGA 307
>sp|Q4QQT5|IDHG2_RAT Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
OS=Rattus norvegicus PE=2 SV=1
Length = 395
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 65/129 (50%), Gaps = 25/129 (19%)
Query: 41 NRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIRR 100
RKKVT VHKANIMKLGDGLFL CK++A YP T MI
Sbjct: 209 GRKKVTVVHKANIMKLGDGLFLQCCKDVAAHYPQITLESMI------------------- 249
Query: 101 IITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGNIV---DNLASDSVISRTG 157
+ N Q+VS P QFDVM+MPNLYGNI + + + G+ + N I TG
Sbjct: 250 ---IDNTAMQLVSKPQQFDVMLMPNLYGNIINSVCTGLVGGSGIVPGANYGDSYAIFETG 306
Query: 158 SCQQSCDMV 166
S + D+
Sbjct: 307 SKEIGQDLA 315
>sp|Q54B68|IDHB_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial
OS=Dictyostelium discoideum GN=idhB PE=3 SV=1
Length = 360
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 29/168 (17%)
Query: 6 LDRLRQLSVCDKVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSC 65
L+++ V + + +E + R+++ + RKKVTAVHKANI K DGLFL +C
Sbjct: 150 LEQVLTPGVVQSLKIITKEASERIARYAFEYAKANGRKKVTAVHKANIQKQTDGLFLATC 209
Query: 66 KEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPN 125
++AK YP F TI + N Q+V +P Q+DVMV PN
Sbjct: 210 TQIAKEYPEIK-----------------FENTI-----IDNCCMQLVKSPEQYDVMVTPN 247
Query: 126 LYGNIFD-----VMVMPNLYGNIVDNLASDSVISRTGSCQQSCDMVSE 168
LYGNI ++ P L G N+ S+I G+ + D+ +
Sbjct: 248 LYGNIVSNIGAALVGGPGLAGGA--NVGEGSIIFEMGAHHVAADIAGK 293
>sp|O13302|IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Ajellomyces capsulatus GN=IDH1 PE=2 SV=1
Length = 388
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 22/101 (21%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ L +NRKKVT +HKANIMKL DGLF ++ ++A+ YP MI
Sbjct: 203 KFAFSFALANNRKKVTCIHKANIMKLADGLFRSTFHKVAESYPTLETNDMI--------- 253
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
V N + Q V+ P QFDVMVMPNLYG I
Sbjct: 254 -------------VDNASMQAVARPQQFDVMVMPNLYGGIL 281
>sp|O94229|IDH1_KLULA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH1 PE=3
SV=1
Length = 361
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 23/102 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEM-AKLYPVWTNRKMITGFIWTTR 89
RF++ L +NRK V AVHKANIMKLGDGLF N+ E+ A YP
Sbjct: 176 RFAFDFALKNNRKSVCAVHKANIMKLGDGLFRNTVNEIGANEYP---------------- 219
Query: 90 DINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++V + I V N + Q V+ PHQFDV+V PNLYG+I
Sbjct: 220 ELDV------KNIIVDNASMQAVAKPHQFDVLVTPNLYGSIL 255
>sp|P28834|IDH1_YEAST Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH1 PE=1 SV=2
Length = 360
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 69/152 (45%), Gaps = 30/152 (19%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPVWTNRKMITGFIWTTR 89
RF++ NRK VTAVHKANIMKLGDGLF N E+ K YP
Sbjct: 175 RFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYP---------------- 218
Query: 90 DINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD-----VMVMPNLYGNIV 144
DI+V I V N + Q V+ PHQFDV+V P++YG I ++ P L
Sbjct: 219 DIDV------SSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGA- 271
Query: 145 DNLASDSVISRTGSCQQSCDMVSEFACSKFIM 176
N D + GS D+ + + M
Sbjct: 272 -NFGRDYAVFEPGSRHVGLDIKGQNVANPTAM 302
>sp|Q55BI2|IDHA_DICDI Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial
OS=Dictyostelium discoideum GN=idhA PE=3 SV=1
Length = 354
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 22/118 (18%)
Query: 13 SVCDKVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLY 72
V + + +E +++ L + RKKVT +HKANIMK DGLF+ SC+E++ Y
Sbjct: 149 GVAQSIKIITKEASTRIAHYAFQYALANGRKKVTCIHKANIMKQSDGLFVKSCREVSTRY 208
Query: 73 PVWTNRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
P ++ T+ N Q+V +P+Q DVMV+PNLYG+I
Sbjct: 209 PSIKYEEL----------------------TIDNNCMQLVLDPNQMDVMVLPNLYGDI 244
>sp|O13696|IDH1_SCHPO Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh1 PE=1 SV=1
Length = 356
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 22/101 (21%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
+F++ L + RK VT +HKANIMKL DGLF + ++A Y T + +I
Sbjct: 172 QFAFDFALQNGRKSVTCIHKANIMKLADGLFRRTFYDVANGYDAITPKDLI--------- 222
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
V N + Q VS P QFDV+VMPNLYG+I
Sbjct: 223 -------------VDNASMQAVSRPQQFDVLVMPNLYGSIL 250
>sp|Q945K7|IDH5_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1
Length = 374
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 29/115 (25%)
Query: 17 KVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWT 76
+ SLR E ++++ R++V+A+HKANIM+ DGLFL C+E+A+ YP T
Sbjct: 186 QASLRVAE-------YAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIT 238
Query: 77 NRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ + N +V NP FDV+VMPNLYG+I
Sbjct: 239 YEEVV----------------------IDNCCMMLVKNPALFDVLVMPNLYGDII 271
>sp|Q8LG77|IDH6_ARATH Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial
OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2
Length = 374
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 29/115 (25%)
Query: 17 KVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWT 76
K S+R E ++++ RKKV+A+HKANIM+ DGLFL C E+A YP
Sbjct: 186 KASMRVAE-------YAFLYAKTHGRKKVSAIHKANIMQKTDGLFLQCCDEVAAKYPEIY 238
Query: 77 NRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
K++ + N +V NP FDV+VMPNLYG+I
Sbjct: 239 YEKVV----------------------IDNCCMMLVKNPALFDVLVMPNLYGDII 271
>sp|Q93714|IDH3A_CAEEL Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F43G9.1 PE=1
SV=3
Length = 358
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 24/100 (24%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y + + RK VTAVHKANIM+ DGLFL+ C+E A LYP + K ++ T
Sbjct: 177 FEYARQ--NGRKVVTAVHKANIMRQSDGLFLSICREQAALYP---DIKFKEAYLDTV--- 228
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+V +P Q+DV+VMPNLYG+I
Sbjct: 229 ----------------CLNMVQDPSQYDVLVMPNLYGDIL 252
>sp|Q9VWH4|IDH3A_DROME Probable isocitrate dehydrogenase [NAD] subunit alpha,
mitochondrial OS=Drosophila melanogaster GN=l(1)G0156
PE=2 SV=1
Length = 377
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Query: 13 SVCDKVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLY 72
V + L EE +++ +NRKKVT VHKANIM++ DGLFL ++MA+ +
Sbjct: 179 GVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKF 238
Query: 73 PVWTNRKMITGFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFD 132
P + + + TV +V NP ++DV+VMPNLYG+I
Sbjct: 239 PEIQ-------------------FEEKYLDTV---CLNMVQNPGKYDVLVMPNLYGDILS 276
Query: 133 VM 134
M
Sbjct: 277 DM 278
>sp|Q9D6R2|IDH3A_MOUSE Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus
musculus GN=Idh3a PE=1 SV=1
Length = 366
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 28/122 (22%)
Query: 13 SVCDKVSLRYEETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLY 72
V + L EE F++ ++R VTAVHKANIM++ DGLFL C+E+A+
Sbjct: 163 GVVQSIKLITEEASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAE-- 220
Query: 73 PVWTNRKMITGFIWTTRDI---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGN 129
+DI +++ T+ +V +P QFDV+VMPNLYG+
Sbjct: 221 --------------NCKDIKFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGD 257
Query: 130 IF 131
I
Sbjct: 258 IL 259
>sp|P29696|LEU3_SOLTU 3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 357
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 24/100 (24%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y + R++V+A+HKANIM+ DGLFL C+E+A+ YP +++
Sbjct: 189 FHYAK--THGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVV---------- 236
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ N +V NP FDV+VMPNLYG+I
Sbjct: 237 ------------IDNCCMMLVKNPALFDVLVMPNLYGDII 264
>sp|P50213|IDH3A_HUMAN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Homo
sapiens GN=IDH3A PE=1 SV=1
Length = 366
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 30/103 (29%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y ++ ++R VTAVHKANIM++ DGLFL C+E+A+ + +DI
Sbjct: 184 FEYARN--NHRSNVTAVHKANIMRMSDGLFLQKCREVAE----------------SCKDI 225
Query: 92 ---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ T+ +V +P QFDV+VMPNLYG+I
Sbjct: 226 KFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGDIL 259
>sp|Q28480|IDH3A_MACFA Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
(Fragment) OS=Macaca fascicularis GN=IDH3A PE=2 SV=2
Length = 347
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 30/103 (29%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y ++ ++R VTAVHKANIM++ DGLFL C+E+A+ +DI
Sbjct: 165 FEYARN--NHRSNVTAVHKANIMRMSDGLFLQKCREVAE----------------NCKDI 206
Query: 92 ---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ T+ +V +P QFDV+VMPNLYG+I
Sbjct: 207 KFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGDIL 240
>sp|Q99NA5|IDH3A_RAT Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Idh3a PE=1 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 30/103 (29%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y ++ ++R VTAVHKANIM++ DGLFL C+E+A+ +DI
Sbjct: 184 FEYARN--NHRSNVTAVHKANIMRMSDGLFLQKCREVAE----------------NCKDI 225
Query: 92 ---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ T+ +V +P QFDV+VMPNLYG+I
Sbjct: 226 KFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGDIL 259
>sp|Q5R678|IDH3A_PONAB Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
OS=Pongo abelii GN=IDH3A PE=2 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 30/103 (29%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y ++ ++R VTAVHKANIM++ DGLFL C+E+A+ +DI
Sbjct: 184 FEYARN--NHRSNVTAVHKANIMRMSDGLFLQKCREVAE----------------NCKDI 225
Query: 92 ---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ T+ +V +P QFDV+VMPNLYG+I
Sbjct: 226 KFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGDIL 259
>sp|P41563|IDH3A_BOVIN Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos
taurus GN=IDH3A PE=1 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 30/103 (29%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y ++ ++R VTAVHKANIM++ DGLFL C+E+A+ +DI
Sbjct: 184 FEYARN--NHRSNVTAVHKANIMRMSDGLFLQKCREVAE----------------NCKDI 225
Query: 92 ---NVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+++ T+ +V +P QFDV+VMPNLYG+I
Sbjct: 226 KFNEMYLDTV---------CLNMVQDPSQFDVLVMPNLYGDIL 259
>sp|Q9USP8|IDH2_SCHPO Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=idh2 PE=1 SV=2
Length = 379
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 24/106 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + + +T VHKA IM++ DGLFL KE+A YP R+ I
Sbjct: 195 RYAFQYARQTGKNNITVVHKATIMRMADGLFLECAKELAPEYPDIELREEI--------- 245
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFD--VMVMPNLYGNIFDVM 134
+ N +IV++P ++ VMVMPNLYG+I M
Sbjct: 246 -------------LDNACLKIVTDPVPYNNTVMVMPNLYGDIVSDM 278
>sp|Q1RJU4|IDH_RICBR Isocitrate dehydrogenase [NADP] OS=Rickettsia bellii (strain
RML369-C) GN=icd PE=3 SV=1
Length = 483
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + +NRKKVT + K NIMK DG+F E+AK YP N I D
Sbjct: 156 RYAFEYAVKNNRKKVTCLSKDNIMKFSDGIFHKVFNEIAKEYPQINNEHYII-------D 208
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
I T ++ + P FDV+V NLYG+I
Sbjct: 209 IG---------------TARLATKPEIFDVIVTSNLYGDI 233
>sp|Q9ZDR0|IDH_RICPR Isocitrate dehydrogenase [NADP] OS=Rickettsia prowazekii (strain
Madrid E) GN=icd PE=3 SV=1
Length = 483
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + +NRKKVT + K NIMK DG+F E+AK YP N I D
Sbjct: 156 RYAFEYAIKNNRKKVTCLTKDNIMKFSDGIFHRVFNEIAKEYPQINNEHYII-------D 208
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
I T ++ + P FD++V NLYG+I
Sbjct: 209 IG---------------TAKLATKPEIFDIIVTSNLYGDI 233
>sp|Q68XA5|IDH_RICTY Isocitrate dehydrogenase [NADP] OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=icd PE=3 SV=1
Length = 483
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + +NRKKVT + K NIMK DG+F E+AK YP N I D
Sbjct: 156 RYAFEYAVKNNRKKVTCLSKDNIMKFSDGIFHRVFNEIAKEYPQIDNEHYII-------D 208
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
I T ++ + P FD++V NLYG+I
Sbjct: 209 IG---------------TAKLATTPEIFDIIVTSNLYGDI 233
>sp|Q4UKR1|IDH_RICFE Isocitrate dehydrogenase [NADP] OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=icd PE=3 SV=2
Length = 483
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + +NRKKVT + K NIMK DG+F E+AK YP N I D
Sbjct: 156 RYAFEYAVKNNRKKVTCLSKDNIMKFSDGVFHKIFNEIAKEYPQINNEHYII-------D 208
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
I T ++ + P FDV+V NLYG+I
Sbjct: 209 IG---------------TARLATKPEIFDVIVTSNLYGDI 233
>sp|Q58991|AKSF_METJA Homoisocitrate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=aksF PE=1 SV=3
Length = 347
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 23/101 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
RF++ + +NRKKV+ +HKAN++++ DGLFL E+ K Y + + ++
Sbjct: 162 RFAFEYAIKNNRKKVSCIHKANVLRITDGLFLEVFNEIKKHYNIEADDYLVDS------- 214
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
T N ++ +P +FDV+V N++G+I
Sbjct: 215 ------------TAMN----LIKHPEKFDVIVTTNMFGDIL 239
>sp|P50455|LEU3_SULTO 3-isopropylmalate dehydrogenase OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=leuB PE=1 SV=3
Length = 337
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 39 LSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTI 98
L RKKVT VHKAN+M++ DGLF +C R ++ G + +
Sbjct: 159 LRRRKKVTCVHKANVMRITDGLFAEAC------------RSVLKGKVEYSE--------- 197
Query: 99 RRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ V +V NP FDV+V N+YG+I
Sbjct: 198 ---MYVDAAAANLVRNPQMFDVIVTENVYGDIL 227
>sp|O29627|LEU3_ARCFU 3-isopropylmalate dehydrogenase OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=leuB PE=3 SV=1
Length = 326
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 32/137 (23%)
Query: 24 ETIDPCPRFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP-VWTNRKMIT 82
E + R+++ RKKVTA+HKAN+MK GLF + C+E+AK YP + N I
Sbjct: 139 EASERIARYAFELAKREGRKKVTALHKANVMKKTCGLFRDVCREVAKDYPEIQYNDYYID 198
Query: 83 GFIWTTRDINVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIFDVMVMPNLYGN 142
+V +P +FDV+V N++G+I + +L
Sbjct: 199 AACM-----------------------YLVMDPFRFDVIVTTNMFGDI-----VSDLAAG 230
Query: 143 IVDNLA---SDSVISRT 156
+V L S +V RT
Sbjct: 231 LVGGLGLAPSANVGERT 247
>sp|P28241|IDH2_YEAST Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=IDH2 PE=1 SV=1
Length = 369
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 32 FSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDI 91
F Y + + R +V VHK+ I +L DGLF+N KE++K YP T +
Sbjct: 188 FEYARAI--GRPRVIVVHKSTIQRLADGLFVNVAKELSKEYPDLTLETEL---------- 235
Query: 92 NVFIWTIRRIITVFNWTRQIVSNPHQFD--VMVMPNLYGNIF 131
+ N ++V+NP + V V PNLYG+I
Sbjct: 236 ------------IDNSVLKVVTNPSAYTDAVSVCPNLYGDIL 265
>sp|Q92IR7|IDH_RICCN Isocitrate dehydrogenase [NADP] OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=icd PE=3 SV=1
Length = 483
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ + +NRKKV + K NIMK DG+ E+AK YP N I D
Sbjct: 156 RYAFEYAVKNNRKKVMCLSKDNIMKFSDGVLHKVFNEIAKEYPQINNAHYII-------D 208
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNI 130
I T ++ + P FDV+V NLYG+I
Sbjct: 209 IG---------------TARLATKPEIFDVIVTSNLYGDI 233
>sp|O14104|LYS12_SCHPO Probable homoisocitrate dehydrogenase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=lys12 PE=1 SV=1
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 45 VTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIRRIITV 104
VT +HK+N+M + DGLF SC+ L P + + INV + + V
Sbjct: 191 VTIIHKSNVMSVTDGLFRESCRHAQSLDPSYAS-------------INVDEQIVDSM--V 235
Query: 105 FNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ R+ P FDV+V PNLYG+I
Sbjct: 236 YRLFRE----PECFDVVVAPNLYGDIL 258
>sp|P33197|IDH_THET8 Isocitrate dehydrogenase [NADP] OS=Thermus thermophilus (strain HB8
/ ATCC 27634 / DSM 579) GN=icd PE=1 SV=2
Length = 496
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
RF++ RKKV K+NIMKL +G + +++A+ YP D
Sbjct: 172 RFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYP----------------D 215
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
I I V N Q+V P QF+V+V N+ G+I
Sbjct: 216 IEAV------HIIVDNAAHQLVKRPEQFEVIVTTNMNGDIL 250
>sp|Q9UXB2|LEU3_SULSO 3-isopropylmalate dehydrogenase OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=leuB PE=3
SV=1
Length = 336
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 39 LSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTI 98
L R+KVT VHKAN+M++ DGLF + C+E+ K +
Sbjct: 159 LMRRRKVTCVHKANVMRVTDGLFASVCREILKGKVNFEE--------------------- 197
Query: 99 RRIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ V +V +P +FDV+V N+YG+I
Sbjct: 198 ---MYVDAAAANLVRDPTRFDVIVTSNVYGDIL 227
>sp|Q9LQK9|IDH4_ARATH Putative isocitrate dehydrogenase [NAD] subunit-like 4
OS=Arabidopsis thaliana GN=IDH4 PE=5 SV=1
Length = 294
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 27 DPCPRFSYVQDLLSNRKKVTAVHK-ANIMKLGDGLFLNSCKEMAKLYP 73
D ++++ S RKKVTAVH KL D FL SC+E+AK+YP
Sbjct: 133 DRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFLESCQEVAKMYP 180
>sp|O94230|IDH2_KLULA Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=IDH2 PE=3
SV=1
Length = 368
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 24/103 (23%)
Query: 31 RFSYVQDLLSNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRD 90
R+++ +R KV VHK+ I +L DGLF++ K+++ YP D
Sbjct: 184 RYAFEYARAVDRSKVLVVHKSTIQRLADGLFVDVAKKLSSEYP----------------D 227
Query: 91 INVFIWTIRRIITVFNWTRQIVSNPHQFD--VMVMPNLYGNIF 131
I + + N + V +P +D V+V PNLYG+I
Sbjct: 228 IELQTELLD------NTVLKTVQHPEAYDDVVVVCPNLYGDIL 264
>sp|P94631|LEU3_CORGL 3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=leuB PE=3 SV=1
Length = 340
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 22/92 (23%)
Query: 40 SNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIR 99
S RKK+T VHK N++ G GL+ + E+AK YP D N
Sbjct: 169 SRRKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYP------------EVAVDYN------- 209
Query: 100 RIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ T +V++P +FDV+V NL+G+I
Sbjct: 210 ---HIDAATIYLVTDPSRFDVIVTDNLFGDIL 238
>sp|A4QDP9|LEU3_CORGB 3-isopropylmalate dehydrogenase OS=Corynebacterium glutamicum
(strain R) GN=leuB PE=3 SV=1
Length = 340
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 22/92 (23%)
Query: 40 SNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPVWTNRKMITGFIWTTRDINVFIWTIR 99
S RKK+T VHK N++ G GL+ + E+AK YP D N
Sbjct: 169 SRRKKLTLVHKTNVLVHGGGLWQRTVDEVAKEYP------------EVAVDYN------- 209
Query: 100 RIITVFNWTRQIVSNPHQFDVMVMPNLYGNIF 131
+ T ++++P +FDV+V NL+G+I
Sbjct: 210 ---HIDAATIYLITDPSRFDVIVTDNLFGDIL 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,258,204
Number of Sequences: 539616
Number of extensions: 2164925
Number of successful extensions: 6276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 5788
Number of HSP's gapped (non-prelim): 448
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)