Query psy3674
Match_columns 306
No_of_seqs 202 out of 744
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 22:43:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyx_A ORF K3, K3RING; zinc-bi 99.8 2.9E-19 9.9E-24 131.8 3.9 57 85-141 3-60 (60)
2 2d8s_A Cellular modulator of i 99.6 1.4E-16 4.8E-21 123.3 4.6 64 80-143 7-73 (80)
3 2kiz_A E3 ubiquitin-protein li 97.3 0.00016 5.4E-09 52.0 3.6 50 85-141 11-64 (69)
4 2ecl_A Ring-box protein 2; RNF 97.2 0.00017 5.9E-09 54.4 2.7 51 87-143 14-79 (81)
5 2ep4_A Ring finger protein 24; 97.1 0.00053 1.8E-08 49.9 4.6 49 85-140 12-64 (74)
6 2l0b_A E3 ubiquitin-protein li 97.1 0.00022 7.6E-09 54.7 2.3 48 85-139 37-88 (91)
7 2ect_A Ring finger protein 126 97.0 0.0002 6.9E-09 52.7 1.6 52 85-143 12-67 (78)
8 2ecw_A Tripartite motif-contai 97.0 0.00059 2E-08 50.0 3.9 53 86-143 17-74 (85)
9 2ct0_A Non-SMC element 1 homol 96.9 0.00052 1.8E-08 52.4 3.2 60 78-141 5-65 (74)
10 1x4j_A Ring finger protein 38; 96.9 0.00045 1.5E-08 50.6 2.7 48 85-139 20-71 (75)
11 1v87_A Deltex protein 2; ring- 96.9 0.00059 2E-08 53.6 3.5 35 102-141 58-95 (114)
12 2ecm_A Ring finger and CHY zin 96.9 0.00038 1.3E-08 47.6 1.9 47 86-139 3-54 (55)
13 2ct2_A Tripartite motif protei 96.8 0.0011 3.8E-08 49.2 4.4 53 85-142 12-70 (88)
14 2csy_A Zinc finger protein 183 96.8 0.0013 4.5E-08 48.8 4.7 48 85-139 12-60 (81)
15 2ecv_A Tripartite motif-contai 96.8 0.001 3.4E-08 48.8 3.7 54 85-143 16-74 (85)
16 2yur_A Retinoblastoma-binding 96.8 0.00084 2.9E-08 49.4 3.2 49 86-139 13-63 (74)
17 2d8t_A Dactylidin, ring finger 96.7 0.00037 1.3E-08 50.7 1.1 50 85-141 12-62 (71)
18 3ng2_A RNF4, snurf, ring finge 96.7 0.00046 1.6E-08 49.4 1.6 52 85-143 7-66 (71)
19 2ea6_A Ring finger protein 4; 96.7 0.00055 1.9E-08 48.5 1.8 48 85-139 12-67 (69)
20 1iym_A EL5; ring-H2 finger, ub 96.7 0.00043 1.5E-08 47.5 1.1 48 86-139 3-54 (55)
21 2ysl_A Tripartite motif-contai 96.5 0.0014 4.7E-08 47.3 2.9 53 85-142 17-71 (73)
22 2ecy_A TNF receptor-associated 96.3 0.002 6.7E-08 46.0 2.7 51 85-141 12-63 (66)
23 3dpl_R Ring-box protein 1; ubi 96.3 0.0023 7.9E-08 51.4 3.4 30 112-143 75-104 (106)
24 2ecn_A Ring finger protein 141 96.3 0.00052 1.8E-08 49.4 -0.6 49 85-140 12-60 (70)
25 2ecj_A Tripartite motif-contai 96.3 0.0038 1.3E-07 42.9 3.8 45 85-134 12-58 (58)
26 1chc_A Equine herpes virus-1 r 96.2 0.0027 9.2E-08 45.2 2.9 48 86-140 3-52 (68)
27 2egp_A Tripartite motif-contai 96.2 0.00081 2.8E-08 49.1 0.1 55 85-144 9-69 (79)
28 2xeu_A Ring finger protein 4; 96.1 0.0013 4.4E-08 45.9 0.9 50 87-143 2-59 (64)
29 1t1h_A Gspef-atpub14, armadill 96.1 0.0032 1.1E-07 46.1 3.0 53 85-143 5-58 (78)
30 3ztg_A E3 ubiquitin-protein li 96.1 0.0053 1.8E-07 46.3 4.3 50 85-139 10-61 (92)
31 2ysj_A Tripartite motif-contai 96.0 0.0083 2.8E-07 42.2 4.4 45 85-134 17-63 (63)
32 2djb_A Polycomb group ring fin 95.9 0.006 2.1E-07 44.3 3.4 50 86-142 13-64 (72)
33 4a0k_B E3 ubiquitin-protein li 95.8 0.002 6.7E-08 53.1 0.6 29 112-142 86-114 (117)
34 3lrq_A E3 ubiquitin-protein li 95.7 0.0056 1.9E-07 47.6 2.9 55 87-147 21-77 (100)
35 1e4u_A Transcriptional repress 95.4 0.011 3.7E-07 44.9 3.4 55 85-143 8-65 (78)
36 2y43_A E3 ubiquitin-protein li 94.7 0.014 4.7E-07 44.7 2.3 52 87-145 21-74 (99)
37 1jm7_A BRCA1, breast cancer ty 94.7 0.014 4.7E-07 45.2 2.3 51 88-143 21-73 (112)
38 1g25_A CDK-activating kinase a 94.6 0.013 4.4E-07 41.6 1.7 50 87-142 2-57 (65)
39 3fl2_A E3 ubiquitin-protein li 94.4 0.024 8.2E-07 45.2 3.0 48 87-140 51-99 (124)
40 4ap4_A E3 ubiquitin ligase RNF 94.3 0.0082 2.8E-07 47.1 0.1 51 86-143 5-63 (133)
41 4ayc_A E3 ubiquitin-protein li 94.0 0.015 5E-07 47.6 1.2 46 89-141 54-100 (138)
42 3k1l_B Fancl; UBC, ring, RWD, 94.0 0.033 1.1E-06 54.3 3.6 52 86-140 306-373 (381)
43 1z6u_A NP95-like ring finger p 93.7 0.036 1.2E-06 46.5 2.9 49 87-141 77-126 (150)
44 2ckl_B Ubiquitin ligase protei 93.5 0.033 1.1E-06 46.5 2.4 48 87-140 53-102 (165)
45 3hct_A TNF receptor-associated 93.1 0.062 2.1E-06 42.6 3.3 51 86-142 16-67 (118)
46 2y1n_A E3 ubiquitin-protein li 92.8 0.056 1.9E-06 52.7 3.3 49 88-142 332-381 (389)
47 4ap4_A E3 ubiquitin ligase RNF 92.8 0.029 1E-06 43.9 1.0 52 85-143 69-128 (133)
48 2c2l_A CHIP, carboxy terminus 92.6 0.087 3E-06 46.1 3.8 52 87-144 207-259 (281)
49 2ckl_A Polycomb group ring fin 92.2 0.037 1.3E-06 43.0 0.9 48 87-141 14-63 (108)
50 1rmd_A RAG1; V(D)J recombinati 92.0 0.076 2.6E-06 41.7 2.5 50 87-142 22-72 (116)
51 2kr4_A Ubiquitin conjugation f 90.6 0.32 1.1E-05 36.8 4.7 52 86-144 12-64 (85)
52 3l11_A E3 ubiquitin-protein li 89.8 0.029 9.8E-07 44.1 -1.9 49 86-140 13-62 (115)
53 1jm7_B BARD1, BRCA1-associated 89.6 0.07 2.4E-06 42.2 0.2 48 87-143 21-70 (117)
54 3nw0_A Non-structural maintena 89.1 0.17 5.7E-06 45.9 2.3 51 87-141 179-230 (238)
55 1wgm_A Ubiquitin conjugation f 86.8 0.48 1.6E-05 37.0 3.4 51 87-143 21-72 (98)
56 2ea5_A Cell growth regulator w 86.4 0.43 1.5E-05 34.8 2.8 46 85-140 12-58 (68)
57 2kre_A Ubiquitin conjugation f 85.9 0.56 1.9E-05 36.7 3.4 51 86-143 27-78 (100)
58 2f42_A STIP1 homology and U-bo 84.9 0.51 1.7E-05 41.3 2.9 51 87-143 105-156 (179)
59 4ic3_A E3 ubiquitin-protein li 83.1 0.23 7.9E-06 36.4 -0.0 43 87-140 23-67 (74)
60 3hcs_A TNF receptor-associated 81.0 0.82 2.8E-05 38.0 2.6 51 86-142 16-67 (170)
61 2vje_B MDM4 protein; proto-onc 80.7 0.49 1.7E-05 33.8 1.0 48 86-140 5-56 (63)
62 1bor_A Transcription factor PM 79.3 0.38 1.3E-05 33.3 0.0 46 86-141 4-50 (56)
63 2yu4_A E3 SUMO-protein ligase 78.3 2 7E-05 32.7 3.9 53 86-143 5-66 (94)
64 2vje_A E3 ubiquitin-protein li 76.1 1 3.4E-05 32.2 1.4 47 86-139 6-56 (64)
65 3knv_A TNF receptor-associated 73.3 0.39 1.3E-05 39.8 -1.6 48 86-139 29-77 (141)
66 2ecg_A Baculoviral IAP repeat- 72.7 1.7 5.8E-05 31.6 2.0 42 88-140 25-68 (75)
67 2lri_C Autoimmune regulator; Z 69.6 1.5 5.2E-05 32.4 1.1 49 85-137 9-59 (66)
68 3htk_C E3 SUMO-protein ligase 69.1 3.3 0.00011 38.6 3.5 56 85-145 178-237 (267)
69 3t6p_A Baculoviral IAP repeat- 62.3 1.1 3.9E-05 42.5 -1.0 44 87-140 294-338 (345)
70 2l43_A N-teminal domain from h 50.0 2 6.8E-05 33.3 -1.3 51 84-137 21-75 (88)
71 1wim_A KIAA0161 protein; ring 47.9 12 0.00041 28.0 2.8 49 87-140 4-64 (94)
72 3ql9_A Transcriptional regulat 45.3 15 0.0005 30.7 3.1 48 85-136 54-110 (129)
73 2bay_A PRE-mRNA splicing facto 45.0 10 0.00035 27.0 1.9 47 89-142 4-52 (61)
74 2lbm_A Transcriptional regulat 42.5 14 0.00047 31.3 2.6 48 85-136 60-116 (142)
75 1weo_A Cellulose synthase, cat 39.7 49 0.0017 26.4 5.2 51 85-139 13-69 (93)
76 2yho_A E3 ubiquitin-protein li 32.8 9.9 0.00034 28.1 0.2 44 88-141 18-62 (79)
77 2l5u_A Chromodomain-helicase-D 31.6 7.9 0.00027 27.7 -0.5 48 85-136 8-57 (61)
78 3u5n_A E3 ubiquitin-protein li 30.1 3.6 0.00012 35.8 -3.1 50 85-138 4-55 (207)
79 3o36_A Transcription intermedi 27.6 6.1 0.00021 33.6 -2.0 48 86-137 2-51 (184)
80 2ysm_A Myeloid/lymphoid or mix 27.5 8.1 0.00028 30.2 -1.2 37 85-124 4-42 (111)
81 1wen_A Inhibitor of growth fam 27.2 13 0.00046 27.5 0.0 48 85-137 13-65 (71)
82 2kvh_A Zinc finger and BTB dom 22.0 31 0.001 18.4 0.9 13 129-141 4-16 (27)
83 1weu_A Inhibitor of growth fam 21.9 26 0.00089 27.4 0.8 48 85-137 33-85 (91)
84 2ku3_A Bromodomain-containing 21.6 10 0.00035 28.2 -1.6 49 85-136 13-65 (71)
85 1znf_A 31ST zinc finger from X 20.6 32 0.0011 18.1 0.8 12 130-141 3-14 (27)
86 2ri7_A Nucleosome-remodeling f 20.6 14 0.00048 30.8 -1.1 49 85-137 5-59 (174)
No 1
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=99.76 E-value=2.9e-19 Score=131.80 Aligned_cols=57 Identities=37% Similarity=0.871 Sum_probs=51.8
Q ss_pred CCCCCeeeEec-cCCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 85 DENAPVCRICH-GSHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 85 s~~~~~CRIC~-ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
+++++.||||+ +++++|+.||+|+||+++||+.||.+|+..+++..||+|+++|+++
T Consensus 3 ~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~r 60 (60)
T 1vyx_A 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNTR 60 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCCC
T ss_pred CCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeecC
Confidence 34778999999 5567899999999999999999999999999999999999999864
No 2
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.4e-16 Score=123.31 Aligned_cols=64 Identities=33% Similarity=0.871 Sum_probs=56.0
Q ss_pred CCCCCCCCCCeeeEecc---CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 80 IGSEHDENAPVCRICHG---SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 80 ~~S~~s~~~~~CRIC~g---e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
..|..+++++.||||++ ++++|+.||+|+|+++++|+.||.+|+..++...|++|+++|.++..
T Consensus 7 ~~s~~~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~~ 73 (80)
T 2d8s_A 7 GTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETK 73 (80)
T ss_dssp CCCCCCTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCCC
T ss_pred CCCCCCCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCcc
Confidence 34555678899999994 35789999999999999999999999999998999999999998654
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.31 E-value=0.00016 Score=52.05 Aligned_cols=50 Identities=26% Similarity=0.651 Sum_probs=37.5
Q ss_pred CCCCCeeeEeccC----CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 85 DENAPVCRICHGS----HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 85 s~~~~~CRIC~ge----~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
......|.||++. ......||. ...|..|+.+|+..+. .|++|+..+...
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~~--~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCM-----HLFHQVCVDQWLITNK--KCPICRVDIEAQ 64 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTS-----CEEEHHHHHHHHHHCS--BCTTTCSBSCSC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCC-----CHHHHHHHHHHHHcCC--CCcCcCccccCc
Confidence 4466789999842 234457763 5689999999998754 599999987654
No 4
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00017 Score=54.42 Aligned_cols=51 Identities=22% Similarity=0.612 Sum_probs=36.5
Q ss_pred CCCeeeEeccCC--------------C-CccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 87 NAPVCRICHGSH--------------E-NLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 87 ~~~~CRIC~ge~--------------~-~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
+++.|-||+++- + ....| .|. ...|..||.+|+..+ ..|++|+.++..+..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~-~C~---H~FH~~Ci~~Wl~~~--~~CP~CR~~~~~~~~ 79 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWG-ECN---HSFHNCCMSLWVKQN--NRCPLCQQDWVVQRI 79 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEE-TTS---CEEEHHHHHHHTTTC--CBCTTTCCBCCEEEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeC-CCC---CccChHHHHHHHHhC--CCCCCcCCCcchhhc
Confidence 566788887421 1 22333 444 779999999999876 489999999987654
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.10 E-value=0.00053 Score=49.87 Aligned_cols=49 Identities=24% Similarity=0.633 Sum_probs=35.5
Q ss_pred CCCCCeeeEeccC--C-CCc-cccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 85 DENAPVCRICHGS--H-ENL-KALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 85 s~~~~~CRIC~ge--~-~~L-IsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
......|.||++. + ..+ +.||. ...|..|+.+|++.+. .|++|+.++.-
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~f~~~Ci~~~~~~~~--~CP~Cr~~~~~ 64 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCK-----HAFHRKCLIKWLEVRK--VCPLCNMPVLQ 64 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTT-----EEEEHHHHHHHHHHCS--BCTTTCCBCSS
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCC-----CEecHHHHHHHHHcCC--cCCCcCccccc
Confidence 3456799999953 2 222 33652 5689999999998754 89999988753
No 6
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.05 E-value=0.00022 Score=54.69 Aligned_cols=48 Identities=23% Similarity=0.647 Sum_probs=35.7
Q ss_pred CCCCCeeeEeccC----CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHGS----HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~ge----~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
.+....|-||+++ +.....||. ...|..|+.+|+..+ ..|.+|+..+.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~Fh~~Ci~~wl~~~--~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCH-----HYFHKPCVSIWLQKS--GTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTT-----EEEEHHHHHHHHTTT--CBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCC-----ChHHHHHHHHHHHcC--CcCcCcCccCC
Confidence 3466799999842 223457764 679999999999754 58999998764
No 7
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.01 E-value=0.0002 Score=52.66 Aligned_cols=52 Identities=23% Similarity=0.612 Sum_probs=38.2
Q ss_pred CCCCCeeeEeccC---CCC-ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHGS---HEN-LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~ge---~~~-LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
......|-||++. ... .+.||. ...|..|+.+|+..+ ..|.+|+.++.....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~~ 67 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCN-----HLFHDSCIVPWLEQH--DSCPVCRKSLTGQNT 67 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTS-----CEEETTTTHHHHTTT--CSCTTTCCCCCCSCS
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCC-----CeecHHHHHHHHHcC--CcCcCcCCccCCccc
Confidence 4567899999853 222 345763 678999999999654 689999999886543
No 8
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.98 E-value=0.00059 Score=49.99 Aligned_cols=53 Identities=25% Similarity=0.570 Sum_probs=41.5
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhc----CCcccCCCCceeeeeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSES----GRSCCEICNFKYKFKRT 143 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s----~~~~CELCk~~Y~~~~~ 143 (306)
.+...|.||++ -.++...||. +..|..|+.+|+..+ +...|.+|+..+....+
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~ 74 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSADCN-----HSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGNL 74 (85)
T ss_dssp CTTTSCTTTCSCCSSCEECTTS-----CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTCC
T ss_pred ccCCCCcCCChhhCcceeCCCC-----CHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHhC
Confidence 45678999995 4567777763 568999999999885 37899999999876433
No 9
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.92 E-value=0.00052 Score=52.44 Aligned_cols=60 Identities=18% Similarity=0.483 Sum_probs=42.7
Q ss_pred CCCCCCCCCCCCeeeEeccCCCCccccc-cccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 78 DEIGSEHDENAPVCRICHGSHENLKALC-ECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 78 ds~~S~~s~~~~~CRIC~ge~~~LIsPC-~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
++..+...+..+.|-||++.-.+ -.-| .|. .-.|..||.+|++.++...|++|+.++..+
T Consensus 5 ~~~~~~y~~~i~~C~IC~~~i~~-g~~C~~C~---h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 5 SSGRETYPDAVKICNICHSLLIQ-GQSCETCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp CCCCCCCSSSSCBCSSSCCBCSS-SEECSSSC---CEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred ccchhhccCCCCcCcchhhHccc-CCccCCCC---chhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 34444556777899999842111 1122 443 668999999999988778999999998764
No 10
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.90 E-value=0.00045 Score=50.61 Aligned_cols=48 Identities=23% Similarity=0.614 Sum_probs=35.8
Q ss_pred CCCCCeeeEeccC-CC---CccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHGS-HE---NLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~ge-~~---~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
..+...|-||+++ .+ ....||. ...|..|+.+|+..+ ..|++|+.++.
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~-----H~fh~~Ci~~w~~~~--~~CP~Cr~~~~ 71 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCN-----HEFHAKCVDKWLKAN--RTCPICRADSG 71 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTT-----EEEETTHHHHHHHHC--SSCTTTCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCC-----CHhHHHHHHHHHHcC--CcCcCcCCcCC
Confidence 3466799999942 22 2457763 569999999999875 57999998765
No 11
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=96.90 E-value=0.00059 Score=53.56 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=28.1
Q ss_pred cccccccCCCccccHHHHHHHHHh---cCCcccCCCCceeeee
Q psy3674 102 KALCECRGTMGLVHAECLTQWLSE---SGRSCCEICNFKYKFK 141 (306)
Q Consensus 102 IsPC~CkGSl~~VH~~CL~~Wl~~---s~~~~CELCk~~Y~~~ 141 (306)
+.||. ...|..||.+|+.. .....|++|+..|..+
T Consensus 58 ~~~C~-----H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 58 LTKCS-----HAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp ESSSC-----CEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cCCCC-----CcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 45663 67999999999976 3467999999999754
No 12
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=96.86 E-value=0.00038 Score=47.63 Aligned_cols=47 Identities=23% Similarity=0.473 Sum_probs=36.0
Q ss_pred CCCCeeeEeccC-----CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 86 ENAPVCRICHGS-----HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 86 ~~~~~CRIC~ge-----~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
.+...|.||++. ..+.+.||. ...|..|+.+|+..+ ..|++|+.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCG-----HLLHRTCYEEMLKEG--YRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTS-----CEEETTHHHHHHHHT--CCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCC-----CcccHHHHHHHHHcC--CcCCCCCCcCC
Confidence 356789999953 124567873 679999999999887 78999998753
No 13
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.84 E-value=0.0011 Score=49.20 Aligned_cols=53 Identities=23% Similarity=0.416 Sum_probs=40.7
Q ss_pred CCCCCeeeEeccC-CC----CccccccccCCCccccHHHHHHHHHhc-CCcccCCCCceeeeee
Q psy3674 85 DENAPVCRICHGS-HE----NLKALCECRGTMGLVHAECLTQWLSES-GRSCCEICNFKYKFKR 142 (306)
Q Consensus 85 s~~~~~CRIC~ge-~~----~LIsPC~CkGSl~~VH~~CL~~Wl~~s-~~~~CELCk~~Y~~~~ 142 (306)
..+...|-||++. .+ +...||. ...|..|+.+|+..+ +...|.+|+..+....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCG-----HTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSS-----CEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred ccCCCCCccCCccccccCCCeEECCCC-----ChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 4466789999942 22 6667762 678999999999876 5678999999987653
No 14
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.82 E-value=0.0013 Score=48.77 Aligned_cols=48 Identities=19% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
......|.||++ -.++.+.||. ...|..|+.+|+.. ...|.+|+..+.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 60 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCR-----HYFCESCALEHFRA--TPRCYICDQPTG 60 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTS-----CEEEHHHHHHHHHH--CSBCSSSCCBCC
T ss_pred CCCCCCCcCCCchhcCeeEccCC-----CHhHHHHHHHHHHC--CCcCCCcCcccc
Confidence 445678999995 4667778874 56799999999975 568999999986
No 15
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.001 Score=48.76 Aligned_cols=54 Identities=24% Similarity=0.497 Sum_probs=41.6
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHh----cCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSE----SGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~----s~~~~CELCk~~Y~~~~~ 143 (306)
..+...|.||++ -.++...||. +..|..|+.+|+.. .+...|.+|+..+....+
T Consensus 16 ~~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~~ 74 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQPLSLDCG-----HSFCQACLTANHKKSMLDKGESSCPVCRISYQPENI 74 (85)
T ss_dssp CCCCCCCTTTCSCCSSCBCCSSS-----CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSSC
T ss_pred ccCCCCCCCCCcccCCceeCCCC-----CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHhc
Confidence 345679999995 3566667763 55899999999987 357899999999886543
No 16
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=96.76 E-value=0.00084 Score=49.37 Aligned_cols=49 Identities=22% Similarity=0.471 Sum_probs=39.3
Q ss_pred CCCCeeeEecc-CCCCcccc-ccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 86 ENAPVCRICHG-SHENLKAL-CECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsP-C~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
.+...|.||++ -.++...| |. +..|..|+.+|+..++...|.+|+.++.
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSC-----CEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHhCCeEcCCCC-----CHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 45678999985 45677777 63 5678999999999888789999999754
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.74 E-value=0.00037 Score=50.66 Aligned_cols=50 Identities=16% Similarity=0.330 Sum_probs=39.2
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
..+...|.||++ -.++...||. +..|..|+.+|+... ..|.+|+..+...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCK-----HVFCYLCVKGASWLG--KRCALCRQEIPED 62 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTT-----EEEEHHHHHHCTTCS--SBCSSSCCBCCHH
T ss_pred CCCCCCCccCCcccCCCEEccCC-----CHHHHHHHHHHHHCC--CcCcCcCchhCHh
Confidence 456678999995 4566777763 568999999999754 7899999998754
No 18
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=96.73 E-value=0.00046 Score=49.43 Aligned_cols=52 Identities=25% Similarity=0.556 Sum_probs=39.0
Q ss_pred CCCCCeeeEeccC-CC-----C--ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHGS-HE-----N--LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~ge-~~-----~--LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
+++...|-||++. .+ . ...||. ...|..|+.+|+..+ ..|++|+..+..+..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~~ 66 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINHKRY 66 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCCBCCCCSC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCC-----ChHhHHHHHHHHHcC--CCCCCCCCccChhhe
Confidence 5567899999852 11 1 456773 568999999999875 589999999876544
No 19
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.71 E-value=0.00055 Score=48.52 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=36.1
Q ss_pred CCCCCeeeEeccC-CC-----C--ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHGS-HE-----N--LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~ge-~~-----~--LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
..+...|-||++. .+ . ...||. ...|..|+.+|+.. ...|.+|+.++.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKIN 67 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSS-----CEEEHHHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCC-----ChhcHHHHHHHHHc--CCCCCCCCCccC
Confidence 4567789999953 11 1 456773 67899999999987 458999998875
No 20
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=96.69 E-value=0.00043 Score=47.51 Aligned_cols=48 Identities=27% Similarity=0.668 Sum_probs=34.4
Q ss_pred CCCCeeeEeccC----CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 86 ENAPVCRICHGS----HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 86 ~~~~~CRIC~ge----~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
+++..|-||+++ +.....| .|. ...|..|+.+|++. ...|++|+.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~-~C~---H~f~~~Ci~~w~~~--~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLP-RCG---HGFHAECVDMWLGS--HSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECS-SSC---CEECTTHHHHTTTT--CCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECC-CCC---CcccHHHHHHHHHc--CCcCcCCCCEeE
Confidence 356789999943 2234455 232 66999999999965 457999998764
No 21
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.52 E-value=0.0014 Score=47.30 Aligned_cols=53 Identities=19% Similarity=0.376 Sum_probs=40.3
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHh-cCCcccCCCCceeeeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSE-SGRSCCEICNFKYKFKR 142 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~-s~~~~CELCk~~Y~~~~ 142 (306)
..+...|.||++ -.++...||. +..|..|+.+|+.. .+...|++|+..+....
T Consensus 17 ~~~~~~C~IC~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 17 LQEEVICPICLDILQKPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCCBCTTTCSBCSSEEECTTC-----CEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred CccCCEeccCCcccCCeEEcCCC-----ChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 345679999995 3566666762 56899999999975 45678999999987643
No 22
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.34 E-value=0.002 Score=46.03 Aligned_cols=51 Identities=22% Similarity=0.353 Sum_probs=38.3
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
..+...|.||++ -.++...||. ...|..|+.+|+. ++...|.+|+..+..+
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQTECG-----HRFCESCMAALLS-SSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCCEECTTTCCEESSCCCCSSS-----CCCCHHHHHHHHT-TSSCCCTTTCCCCCTT
T ss_pred CCcCCCCCCCChHhcCeeECCCC-----CHHHHHHHHHHHH-hCcCCCCCCCcCCChh
Confidence 345678999985 3556666764 5579999999997 4556899999987643
No 23
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=96.32 E-value=0.0023 Score=51.41 Aligned_cols=30 Identities=27% Similarity=0.766 Sum_probs=25.6
Q ss_pred ccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 112 GLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 112 ~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
...|..|+.+|+.. ...|++|+.+|.++..
T Consensus 75 H~FH~~Ci~~Wl~~--~~~CP~Cr~~~~~~~~ 104 (106)
T 3dpl_R 75 HAFHFHCISRWLKT--RQVCPLDNREWEFQKY 104 (106)
T ss_dssp CEEEHHHHHHHHTT--CSBCSSSCSBCCEEEC
T ss_pred cEECHHHHHHHHHc--CCcCcCCCCcceeecC
Confidence 77999999999976 4689999999887643
No 24
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.00052 Score=49.41 Aligned_cols=49 Identities=20% Similarity=0.543 Sum_probs=37.7
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
..+...|.||++.....+.||. ...|..|+.+|+. ....|++|+.++..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~Cg-----H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 12 LTDEEECCICMDGRADLILPCA-----HSFCQKCIDKWSD--RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCCCSSSCCSCCSEEETTT-----EEECHHHHHHSSC--CCSSCHHHHHCTTC
T ss_pred CCCCCCCeeCCcCccCcccCCC-----CcccHHHHHHHHH--CcCcCCCcCCcccC
Confidence 3456789999964333778874 5589999999987 56789999988764
No 25
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.0038 Score=42.86 Aligned_cols=45 Identities=20% Similarity=0.544 Sum_probs=34.4
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHh-cCCcccCCC
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSE-SGRSCCEIC 134 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~-s~~~~CELC 134 (306)
..+...|.||++ -.++.+.||. ...|..|+.+|+.. .+...|++|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVIIECG-----HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCCSSC-----CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cccCCCCccCCcccCccEeCCCC-----CccCHHHHHHHHHhcCCCCCCCCC
Confidence 346679999995 4567777763 55899999999875 456789988
No 26
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=96.22 E-value=0.0027 Score=45.24 Aligned_cols=48 Identities=21% Similarity=0.563 Sum_probs=36.9
Q ss_pred CCCCeeeEeccC-CCC-ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 86 ENAPVCRICHGS-HEN-LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 86 ~~~~~CRIC~ge-~~~-LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
+.+..|-||++. .++ ...||. ...|..|+.+|+..+ ..|++|+..+..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 52 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCL-----HAFCYVCITRWIRQN--PTCPLCKVPVES 52 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTT-----EEESTTHHHHHHHHS--CSTTTTCCCCCC
T ss_pred CCCCCCeeCCccccCCcEecCCC-----CeeHHHHHHHHHhCc--CcCcCCChhhHh
Confidence 356789999954 343 567874 558999999999765 589999998763
No 27
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=96.20 E-value=0.00081 Score=49.11 Aligned_cols=55 Identities=27% Similarity=0.570 Sum_probs=41.9
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhc-----CCcccCCCCceeeeeeec
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSES-----GRSCCEICNFKYKFKRTL 144 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s-----~~~~CELCk~~Y~~~~~~ 144 (306)
-.+...|.||++ -.++...||. +..|..|+.+|+..+ +...|++|+..+....++
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~l~ 69 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCG-----HSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEHLQ 69 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSS-----CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSGGG
T ss_pred cccCCCCcCCCcccCCeeECCCC-----CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhhCC
Confidence 346789999995 4567777763 568999999999874 377899999998865443
No 28
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=96.14 E-value=0.0013 Score=45.90 Aligned_cols=50 Identities=26% Similarity=0.536 Sum_probs=36.7
Q ss_pred CCCeeeEeccC-CC-------CccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 87 NAPVCRICHGS-HE-------NLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 87 ~~~~CRIC~ge-~~-------~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
+...|-||++. .+ ....||. ...|..|+.+|++. ...|++|+..+..+.+
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCTTTCE
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCC-----CchhHHHHHHHHHc--CCCCCCCCccCCccce
Confidence 45689999842 11 1456764 56899999999987 4689999999876443
No 29
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=96.13 E-value=0.0032 Score=46.10 Aligned_cols=53 Identities=11% Similarity=0.158 Sum_probs=40.7
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
..+.-.|-||++ -.+|.+.||. ...++.|+.+|+.. +...|.+|+..+....+
T Consensus 5 ~~~~~~C~IC~~~~~~Pv~~~Cg-----H~fc~~Ci~~~~~~-~~~~CP~C~~~~~~~~l 58 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDPVIVSTG-----QTYERSSIQKWLDA-GHKTCPKSQETLLHAGL 58 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEETTT-----EEEEHHHHHHHHTT-TCCBCTTTCCBCSSCCC
T ss_pred CcccCCCCCccccccCCEEcCCC-----CeecHHHHHHHHHH-CcCCCCCCcCCCChhhC
Confidence 446678999985 3567777764 56789999999964 46789999999876543
No 30
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=96.12 E-value=0.0053 Score=46.27 Aligned_cols=50 Identities=22% Similarity=0.436 Sum_probs=40.7
Q ss_pred CCCCCeeeEecc-CCCCcccc-ccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHG-SHENLKAL-CECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsP-C~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
..+.-.|-||++ -.+|...| |. +..+..||.+|+..++...|++|+..+.
T Consensus 10 ~~~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 10 IPDELLCLICKDIMTDAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCTTTEETTTTEECSSCEECTTTC-----CEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CCcCCCCCCCChhhcCceECCCCC-----CHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 346679999995 46787788 52 5578999999999888889999999974
No 31
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.95 E-value=0.0083 Score=42.23 Aligned_cols=45 Identities=24% Similarity=0.479 Sum_probs=34.6
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhc-CCcccCCC
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSES-GRSCCEIC 134 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s-~~~~CELC 134 (306)
..+...|.||++ -.++.+.||. ...|..|+.+|++.+ +...|++|
T Consensus 17 ~~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSCEECTTS-----SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCCeEEeCCC-----CcchHHHHHHHHHcCCCCCcCcCC
Confidence 346678999995 4567777763 568999999999864 46689988
No 32
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.86 E-value=0.006 Score=44.26 Aligned_cols=50 Identities=18% Similarity=0.417 Sum_probs=37.9
Q ss_pred CCCCeeeEeccC-CCCcc-ccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 86 ENAPVCRICHGS-HENLK-ALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 86 ~~~~~CRIC~ge-~~~LI-sPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
.+...|.||++. .++.. .||. +..|..|+.+|+.. ...|++|+..+....
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECL-----HTFCKSCIVRHFYY--SNRCPKCNIVVHQTQ 64 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSC-----CEECHHHHHHHHHH--CSSCTTTCCCCCSSC
T ss_pred CCCCCCCCCChHHHCcCEECCCC-----CHHHHHHHHHHHHc--CCcCCCcCcccCccc
Confidence 356789999853 44554 4774 55799999999976 468999999987643
No 33
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=95.79 E-value=0.002 Score=53.07 Aligned_cols=29 Identities=28% Similarity=0.815 Sum_probs=0.0
Q ss_pred ccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 112 GLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 112 ~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
...|..|+.+|+.. ...|++|+.+|.++.
T Consensus 86 H~FH~~CI~~Wl~~--~~~CP~Cr~~~~~~k 114 (117)
T 4a0k_B 86 HAFHFHCISRWLKT--RQVCPLDNREWEFQK 114 (117)
T ss_dssp -------------------------------
T ss_pred ceEcHHHHHHHHHc--CCcCCCCCCeeeeec
Confidence 67999999999987 457999999988754
No 34
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=95.71 E-value=0.0056 Score=47.57 Aligned_cols=55 Identities=20% Similarity=0.500 Sum_probs=41.7
Q ss_pred CCCeeeEecc-CCCCcc-ccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeeeccch
Q psy3674 87 NAPVCRICHG-SHENLK-ALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRTLKRP 147 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LI-sPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~~k~~ 147 (306)
+...|-||++ -.+|.. .||. ...|..|+.+|+..++ ..|++|+..+....+.+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~Cg-----H~FC~~Ci~~~~~~~~-~~CP~Cr~~~~~~~l~~~~ 77 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCS-----KLCCFSCIRRWLTEQR-AQCPHCRAPLQLRELVNCR 77 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTC-----CEEEHHHHHHHHHHTC-SBCTTTCCBCCGGGCEECT
T ss_pred CCCCCccCCccccCccccCCCC-----ChhhHHHHHHHHHHCc-CCCCCCCCcCCHHHhHhhH
Confidence 4468999985 355666 7773 5689999999999875 6899999999876554433
No 35
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=95.38 E-value=0.011 Score=44.87 Aligned_cols=55 Identities=16% Similarity=0.373 Sum_probs=42.4
Q ss_pred CCCCCeeeEeccC---CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHGS---HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~ge---~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
.+++..|-||++. ....+.||.|. +.+++.|+.++... +...|++|+..|.....
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CG---H~fC~~Cl~~~~~~-~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCG---YQICRFCWHRIRTD-ENGLCPACRKPYPEDPA 65 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTS---CCCCHHHHHHHTTS-SCSBCTTTCCBCSSCSS
T ss_pred cccCCcCCccCccCccccccccccCCC---CCcCHHHHHHHHhc-CCCCCCCCCCccCCCch
Confidence 3566789999963 34567899895 56899999998754 56789999999986543
No 36
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=94.73 E-value=0.014 Score=44.74 Aligned_cols=52 Identities=17% Similarity=0.360 Sum_probs=38.3
Q ss_pred CCCeeeEeccC-CCCccc-cccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeeecc
Q psy3674 87 NAPVCRICHGS-HENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRTLK 145 (306)
Q Consensus 87 ~~~~CRIC~ge-~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~~k 145 (306)
+...|.||++. .++... ||. +..|..|+.+|+.. ...|++|+..+......+
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~~~l~~ 74 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCS-----HNYCSLCIRKFLSY--KTQCPTCCVTVTEPDLKN 74 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTC-----CEEEHHHHHHHHTT--CCBCTTTCCBCCGGGCEE
T ss_pred CCCCcccCChhhCCcCEECCCC-----CHhhHHHHHHHHHC--CCCCCCCCCcCChhhCCc
Confidence 34689999853 456544 664 56899999999984 468999999988644433
No 37
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.70 E-value=0.014 Score=45.16 Aligned_cols=51 Identities=22% Similarity=0.505 Sum_probs=39.0
Q ss_pred CCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhc-CCcccCCCCceeeeeee
Q psy3674 88 APVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSES-GRSCCEICNFKYKFKRT 143 (306)
Q Consensus 88 ~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s-~~~~CELCk~~Y~~~~~ 143 (306)
...|-||++ -.++...||. +..|..|+.+|+..+ +...|++|+..+.....
T Consensus 21 ~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 73 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCD-----HIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTS-----CCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTC
T ss_pred CCCCcccChhhcCeEECCCC-----CHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhc
Confidence 347999995 3567777763 567999999999875 45689999998876433
No 38
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.56 E-value=0.013 Score=41.58 Aligned_cols=50 Identities=14% Similarity=0.426 Sum_probs=36.4
Q ss_pred CCCeeeEecc-C-CCC----ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 87 NAPVCRICHG-S-HEN----LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 87 ~~~~CRIC~g-e-~~~----LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
++..|-||++ . .++ ++.||. ...|..|+.+|+.. +...|.+|+..+....
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCG-----HTLCESCVDLLFVR-GAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTC-----CCEEHHHHHHHHHT-TSSSCTTTCCCCSSCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCC-----CHhHHHHHHHHHHc-CCCcCCCCCCcccccc
Confidence 3567999986 2 233 356764 45899999999874 4678999999987543
No 39
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=94.35 E-value=0.024 Score=45.18 Aligned_cols=48 Identities=17% Similarity=0.467 Sum_probs=37.6
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
+...|.||++ -.+|...||. +..|..|+.+|+. .+...|++|+..+..
T Consensus 51 ~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQ-----HNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTS-----CEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCcEEeeCC-----CcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 3457999995 4567777773 5589999999998 445689999999976
No 40
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=94.26 E-value=0.0082 Score=47.11 Aligned_cols=51 Identities=25% Similarity=0.551 Sum_probs=38.1
Q ss_pred CCCCeeeEeccC-CCC-------ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 86 ENAPVCRICHGS-HEN-------LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 86 ~~~~~CRIC~ge-~~~-------LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
.+...|-||++. .++ ...||. ...|..|+.+|+..+ ..|++|+..+.....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINHKRY 63 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTC-----CEEEHHHHHHHHTTC--SBCTTTCCBCTTTCE
T ss_pred CCCCCCcccChhhhCccccccCeEecCCC-----ChhhHHHHHHHHHhC--CCCCCCCCcCccccc
Confidence 356789999852 222 567774 568999999999765 489999999986544
No 41
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=94.04 E-value=0.015 Score=47.55 Aligned_cols=46 Identities=26% Similarity=0.579 Sum_probs=36.3
Q ss_pred CeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 89 PVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 89 ~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
..|.||++ -.+|.+.||. +..|..|+.+|+.. ...|++|+..+...
T Consensus 54 ~~C~iC~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCA-----HSFCSYCINEWMKR--KIECPICRKDIKSK 100 (138)
T ss_dssp SBCTTTCSBCSSEEEETTS-----CEEEHHHHHHHTTT--CSBCTTTCCBCCCE
T ss_pred CCCcccCcccCCceECCCC-----CCccHHHHHHHHHc--CCcCCCCCCcCCCC
Confidence 46999995 4567778873 57899999999865 46799999988654
No 42
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=93.96 E-value=0.033 Score=54.29 Aligned_cols=52 Identities=25% Similarity=0.605 Sum_probs=38.5
Q ss_pred CCCCeeeEecc---CCCCc-ccccc---ccCCCccccHHHHHHHHHhcCC---------cccCCCCceeee
Q psy3674 86 ENAPVCRICHG---SHENL-KALCE---CRGTMGLVHAECLTQWLSESGR---------SCCEICNFKYKF 140 (306)
Q Consensus 86 ~~~~~CRIC~g---e~~~L-IsPC~---CkGSl~~VH~~CL~~Wl~~s~~---------~~CELCk~~Y~~ 140 (306)
+....|-||++ +++.+ ...|. |. ...|..||.+|+++..+ ..|+.|+.+...
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~---h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCV---LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCC---CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCccccccCCccC---CccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 46678999994 22444 35574 65 78999999999987532 589999997764
No 43
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=93.66 E-value=0.036 Score=46.46 Aligned_cols=49 Identities=16% Similarity=0.371 Sum_probs=38.7
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
+...|.||++ -.+|.+.||. ...+..|+.+|+.. +...|++|+..+...
T Consensus 77 ~~~~C~IC~~~~~~pv~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECF-----HNVCKDCLQRSFKA-QVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcCCEEcCCC-----CchhHHHHHHHHHh-CCCcCCCCCccCCCC
Confidence 3468999995 4667777874 45789999999985 445899999998865
No 44
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=93.46 E-value=0.033 Score=46.48 Aligned_cols=48 Identities=23% Similarity=0.490 Sum_probs=35.9
Q ss_pred CCCeeeEeccC-CCCccc-cccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 87 NAPVCRICHGS-HENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 87 ~~~~CRIC~ge-~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
+...|-||++. .++... ||. +..|..|+.+|+.. +...|++|+..+..
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECL-----HRFCADCIITALRS-GNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhCcCEeCCCC-----ChhHHHHHHHHHHh-CcCCCCCCCCcCCC
Confidence 34589999853 445544 664 66899999999985 35779999999854
No 45
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=93.06 E-value=0.062 Score=42.59 Aligned_cols=51 Identities=20% Similarity=0.370 Sum_probs=39.1
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
.+...|.||++ -.++...||. ...+..|+.+|+..++. .|++|+..+....
T Consensus 16 ~~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~~~-~CP~Cr~~~~~~~ 67 (118)
T 3hct_A 16 ESKYECPICLMALREAVQTPCG-----HRFCKACIIKSIRDAGH-KCPVDNEILLENQ 67 (118)
T ss_dssp CGGGBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHHHHHCS-BCTTTCCBCCGGG
T ss_pred CCCCCCCcCChhhcCeEECCcC-----ChhhHHHHHHHHhhCCC-CCCCCCCCcCHHh
Confidence 45568999985 4566667763 56899999999987654 7999999887543
No 46
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=92.84 E-value=0.056 Score=52.70 Aligned_cols=49 Identities=24% Similarity=0.590 Sum_probs=38.9
Q ss_pred CCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 88 APVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 88 ~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
...|.||++ ..++...||.- ..|..|+.+|+.. +...|++|+.++....
T Consensus 332 ~~~C~ICle~~~~pv~lpCGH-----~FC~~Ci~~wl~~-~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 332 FQLCKICAENDKDVKIEPCGH-----LMCTSCLTSWQES-EGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSBCTTTSSSBCCEEEETTCC-----EECHHHHHHHHHH-TCSBCTTTCCBCCEEE
T ss_pred CCCCCccCcCCCCeEEeCCCC-----hhhHHHHHHHHhc-CCCCCCCCCCccCCce
Confidence 468999995 46677889854 3599999999985 5668999999887654
No 47
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=92.82 E-value=0.029 Score=43.88 Aligned_cols=52 Identities=23% Similarity=0.542 Sum_probs=37.6
Q ss_pred CCCCCeeeEeccC------CCC--ccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 85 DENAPVCRICHGS------HEN--LKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 85 s~~~~~CRIC~ge------~~~--LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
.++...|-||++. .+. ...||. ...|..|+.+|+..+ ..|.+|+..+..+.+
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~~~~ 128 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINHKRY 128 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTS-----BEEEHHHHHHHHHHC--SBCTTTCCBCCGGGE
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCC-----ChhhHHHHHHHHHcC--CCCCCCCCcCChhcc
Confidence 3456789999842 122 345552 679999999999875 589999999876543
No 48
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=92.55 E-value=0.087 Score=46.10 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=39.9
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeeec
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRTL 144 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~~ 144 (306)
..-.|-||++ -.+|.+.||. .-.-+.|+++|+..++.. |++|+.++....+.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~g-----h~f~~~~i~~~~~~~~~~-cP~~~~~~~~~~l~ 259 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSG-----ITYDRKDIEEHLQRVGHF-NPVTRSPLTQEQLI 259 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSC-----CEEETTHHHHHHHHTCSS-CTTTCCCCCGGGCE
T ss_pred cccCCcCcCCHhcCCeECCCC-----CEECHHHHHHHHHHCCCC-CcCCCCCCchhcCc
Confidence 5678999985 5789999973 334578999999876544 99999999765443
No 49
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=92.18 E-value=0.037 Score=43.02 Aligned_cols=48 Identities=21% Similarity=0.522 Sum_probs=37.0
Q ss_pred CCCeeeEecc-CCCCccc-cccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 87 NAPVCRICHG-SHENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
+...|.||++ -.++... ||. +..|..|+.+|+..+ ..|.+|+..+...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~Cg-----H~fC~~Ci~~~~~~~--~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECL-----HSFCKTCIVRYLETS--KYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTC-----CEEEHHHHHHHHTSC--SBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCcCEeCCCC-----ChhhHHHHHHHHHhC--CcCcCCCcccccc
Confidence 4568999985 3456654 774 557999999999764 7899999998753
No 50
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=92.05 E-value=0.076 Score=41.66 Aligned_cols=50 Identities=20% Similarity=0.466 Sum_probs=38.7
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
+...|-||++ -.+|...||. ...|..|+.+|+..+ ...|++|+..+....
T Consensus 22 ~~~~C~IC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~~-~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 22 KSISCQICEHILADPVETSCK-----HLFCRICILRCLKVM-GSYCPSCRYPCFPTD 72 (116)
T ss_dssp HHTBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHHHHT-CSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCcHhcCcEEcCCC-----CcccHHHHHHHHhHC-cCcCCCCCCCCCHhh
Confidence 3568999985 4567777763 567999999999875 457999999987644
No 51
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=90.63 E-value=0.32 Score=36.79 Aligned_cols=52 Identities=2% Similarity=-0.115 Sum_probs=40.2
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeeec
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRTL 144 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~~ 144 (306)
.+.-.|-||++ -.+|.+.||. .-.-+.|+++|+.. ...|.+|+..+....+.
T Consensus 12 p~~~~CpI~~~~m~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~~~l~ 64 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLPSG-----TVMDRSIILRHLLN--SPTDPFNRQMLTESMLE 64 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCCGGGCE
T ss_pred chheECcccCchhcCCeECCCC-----CEECHHHHHHHHhc--CCCCCCCcCCCChHhcc
Confidence 35778999985 4678888862 34678999999985 46899999998865443
No 52
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=89.80 E-value=0.029 Score=44.06 Aligned_cols=49 Identities=18% Similarity=0.452 Sum_probs=38.2
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
.+...|-||++ -.+|...||. +..|..|+.+|+.. +...|.+|+..+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCN-----HTLCKPCFQSTVEK-ASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTS-----CEECHHHHCCCCCT-TTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCceeEcCCC-----CHHhHHHHHHHHhH-CcCCCCCCCcccCc
Confidence 34568999995 4567777874 56899999999964 35789999999875
No 53
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=89.56 E-value=0.07 Score=42.23 Aligned_cols=48 Identities=17% Similarity=0.430 Sum_probs=36.8
Q ss_pred CCCeeeEecc-CCCCccc-cccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 87 NAPVCRICHG-SHENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
+...|.||++ -.+|... ||. +..+..|+.+|+. ..|++|+..+....+
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~Cg-----H~fC~~Ci~~~~~----~~CP~Cr~~~~~~~~ 70 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCE-----HIFCSNCVSDCIG----TGCPVCYTPAWIQDL 70 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSS-----CCBCTTTGGGGTT----TBCSSSCCBCSCSSC
T ss_pred hCCCCCCCChHhhCccEeCCCC-----CHHHHHHHHHHhc----CCCcCCCCcCccccc
Confidence 4568999995 4567666 773 5678999999987 689999999865433
No 54
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=89.06 E-value=0.17 Score=45.85 Aligned_cols=51 Identities=24% Similarity=0.624 Sum_probs=37.8
Q ss_pred CCCeeeEeccCCCCcccccc-ccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 87 NAPVCRICHGSHENLKALCE-CRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 87 ~~~~CRIC~ge~~~LIsPC~-CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
....|-||++---+ -.-|. |. ...|..|+.+|++.++...|+.|+..+...
T Consensus 179 ~i~~C~iC~~iv~~-g~~C~~C~---~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 179 AVKICNICHSLLIQ-GQSCETCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp TCCBCTTTCSBCSS-CEECSSSC---CEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCCcCcchhhHHhC-CcccCccC---hHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 47889999841110 12232 54 679999999999988888999999988765
No 55
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=86.85 E-value=0.48 Score=36.99 Aligned_cols=51 Identities=6% Similarity=-0.048 Sum_probs=39.1
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
++-.|-||++ -.+|.+.||. | .-.-+.|+++|+.. ...|++|+..+....+
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG--~--htf~r~cI~~~l~~--~~~cP~~~~~l~~~~L 72 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSS--R--VTVDRSTIARHLLS--DQTDPFNRSPLTMDQI 72 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTT--C--CEEEHHHHHHHTTT--SCBCTTTCSBCCTTTS
T ss_pred HhcCCcCccccccCCeECCCC--C--eEECHHHHHHHHHh--CCCCCCCCCCCChhhc
Confidence 5678999985 4678888875 1 33568999999985 4589999999886543
No 56
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.44 E-value=0.43 Score=34.79 Aligned_cols=46 Identities=17% Similarity=0.413 Sum_probs=33.1
Q ss_pred CCCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 85 DENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
.++...|.||++ ..+....||.=. .+-..|+.+ ...|++|+..+..
T Consensus 12 ~~~~~~C~IC~~~~~~~v~~pCgH~----~~C~~C~~~------~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 12 EENSKDCVVCQNGTVNWVLLPCRHT----CLCDGCVKY------FQQCPMCRQFVQE 58 (68)
T ss_dssp CCCSSCCSSSSSSCCCCEETTTTBC----CSCTTHHHH------CSSCTTTCCCCCC
T ss_pred CCCCCCCCCcCcCCCCEEEECCCCh----hhhHHHHhc------CCCCCCCCcchhc
Confidence 456789999995 567778899532 144568873 4689999998764
No 57
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=85.93 E-value=0.56 Score=36.73 Aligned_cols=51 Identities=2% Similarity=-0.083 Sum_probs=39.9
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
.+.-.|-||++ -.+|.+.||. .-.-+.|+++|+.. ...|++|+..+....+
T Consensus 27 p~~~~CpI~~~~m~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~~~L 78 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRLPSG-----TIMDRSIILRHLLN--SPTDPFNRQTLTESML 78 (100)
T ss_dssp STTTBCTTTCSBCSSEEEETTT-----EEEEHHHHHHHTTS--CSBCSSSCCBCCTTSS
T ss_pred cHhhCCcCccCcccCCeECCCC-----CEEchHHHHHHHHc--CCCCCCCCCCCChhhc
Confidence 36679999985 4789999963 34678999999973 5689999999886543
No 58
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=84.94 E-value=0.51 Score=41.29 Aligned_cols=51 Identities=8% Similarity=-0.024 Sum_probs=39.9
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKRT 143 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~~ 143 (306)
+.-.|-||++ -.+|.+.||. .-.=+.|+.+|+...+. .|++|+.++....+
T Consensus 105 ~~f~CPI~~elm~DPV~~~~G-----htfer~~I~~~l~~~~~-tcP~t~~~l~~~~L 156 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSG-----ITYDRKDIEEHLQRVGH-FDPVTRSPLTQDQL 156 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHHHHTCS-BCTTTCCBCCGGGC
T ss_pred HhhcccCccccCCCCeECCCC-----CEECHHHHHHHHHhCCC-CCCCCcCCCChhhC
Confidence 5678999985 4678888873 34568999999988655 69999999876543
No 59
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=83.13 E-value=0.23 Score=36.41 Aligned_cols=43 Identities=21% Similarity=0.522 Sum_probs=33.9
Q ss_pred CCCeeeEecc-CCCCccccccccCCCcc-ccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGL-VHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~-VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
+...|.||++ ..++...||. +. ....|+.+| ..|++|+..+..
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCg-----H~~~C~~C~~~~------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCG-----HLVTCKQCAEAV------DKCPMCYTVITF 67 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTC-----CBCCCHHHHTTC------SBCTTTCCBCSE
T ss_pred cCCCCCCCCCCCCCEEEcCCC-----ChhHHHHhhhcC------ccCCCcCcCccC
Confidence 3468999995 4567778884 44 789999998 789999998864
No 60
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=81.00 E-value=0.82 Score=37.99 Aligned_cols=51 Identities=20% Similarity=0.370 Sum_probs=38.2
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
.+.-.|-||++ -.+|...||. ......|+.+|+..++. .|++|+..+....
T Consensus 16 ~~~~~C~IC~~~~~~pv~~~Cg-----H~fC~~Ci~~~~~~~~~-~CP~Cr~~~~~~~ 67 (170)
T 3hcs_A 16 ESKYECPICLMALREAVQTPCG-----HRFCKACIIKSIRDAGH-KCPVDNEILLENQ 67 (170)
T ss_dssp CGGGBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHHHHHCS-BCTTTCCBCCGGG
T ss_pred CCCCCCCCCChhhcCcEECCCC-----CHHHHHHHHHHHHhCCC-CCCCCccCcchhh
Confidence 35568999985 4567666652 55789999999987644 8999998877643
No 61
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=80.69 E-value=0.49 Score=33.77 Aligned_cols=48 Identities=15% Similarity=0.366 Sum_probs=33.9
Q ss_pred CCCCeeeEeccC-CCCcc--ccccccCCCcc-ccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 86 ENAPVCRICHGS-HENLK--ALCECRGTMGL-VHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 86 ~~~~~CRIC~ge-~~~LI--sPC~CkGSl~~-VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
+....|.||++. .+..+ .||. +. +-..|+.+|.+.+ ..|++|+.+...
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~CPiCR~~i~~ 56 (63)
T 2vje_B 5 NLLKPCSLCEKRPRDGNIIHGRTG-----HLVTCFHCARRLKKAG--ASCPICKKEIQL 56 (63)
T ss_dssp GGGSBCTTTSSSBSCEEEEETTEE-----EEEECHHHHHHHHHTT--CBCTTTCCBCCE
T ss_pred CcCCCCcccCCcCCCeEEEecCCC-----CHhHHHHHHHHHHHhC--CcCCCcCchhhc
Confidence 356689999964 34444 4884 22 4678999998653 689999998753
No 62
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=79.33 E-value=0.38 Score=33.35 Aligned_cols=46 Identities=17% Similarity=0.370 Sum_probs=34.0
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
.+...|.||++ -.++...||. ...+..|+.+ ....|.+|+..+...
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~Cg-----H~fC~~Ci~~-----~~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCL-----HTLCSGCLEA-----SGMQCPICQAPWPLG 50 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTS-----CCSBTTTCSS-----SSSSCSSCCSSSSCC
T ss_pred ccCCCceEeCCccCCeEEcCCC-----CcccHHHHcc-----CCCCCCcCCcEeecC
Confidence 35567999995 4567788874 3467888877 356899999988764
No 63
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.28 E-value=2 Score=32.70 Aligned_cols=53 Identities=11% Similarity=0.325 Sum_probs=38.5
Q ss_pred CCCCeeeEecc-CCCCcccc-ccccCCCccccHHHHHHHHHhc----CCcccCC--CCce-eeeeee
Q psy3674 86 ENAPVCRICHG-SHENLKAL-CECRGTMGLVHAECLTQWLSES----GRSCCEI--CNFK-YKFKRT 143 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsP-C~CkGSl~~VH~~CL~~Wl~~s----~~~~CEL--Ck~~-Y~~~~~ 143 (306)
...-.|-||++ -.+|.+.| |. .-.-+.|+++|+... +...|++ |... +....+
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cG-----h~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L 66 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCG-----HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDL 66 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSC-----CEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGE
T ss_pred CcEeECcCcCchhcCCEEcCCCC-----CeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhC
Confidence 45678999985 46788876 63 345689999999875 3678999 9876 554433
No 64
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=76.12 E-value=1 Score=32.24 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=33.3
Q ss_pred CCCCeeeEeccC-CCCccc--cccccCCCcc-ccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 86 ENAPVCRICHGS-HENLKA--LCECRGTMGL-VHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 86 ~~~~~CRIC~ge-~~~LIs--PC~CkGSl~~-VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
+++..|-||++. .+..+. ||+ .. .=..|+.+|... ...|++|+..+.
T Consensus 6 ~~~~~C~IC~~~~~~~~~~~~pCg-----H~~~C~~C~~~~~~~--~~~CPiCR~~i~ 56 (64)
T 2vje_A 6 NAIEPCVICQGRPKNGCIVHGKTG-----HLMACFTCAKKLKKR--NKPCPVCRQPIQ 56 (64)
T ss_dssp GGGSCCTTTSSSCSCEEEEETTEE-----EEEECHHHHHHHHHT--TCCCTTTCCCCC
T ss_pred CCcCCCCcCCCCCCCEEEECCCCC-----ChhhHHHHHHHHHHc--CCcCCCcCcchh
Confidence 456689999964 445544 874 22 236899999974 357999999875
No 65
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=73.33 E-value=0.39 Score=39.77 Aligned_cols=48 Identities=25% Similarity=0.479 Sum_probs=35.7
Q ss_pred CCCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 86 ENAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 86 ~~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
++.-.|-||++ -.+|...||. ...+..|+.+|+.. +...|.+|+.+..
T Consensus 29 ~~~~~C~IC~~~~~~pv~~~Cg-----H~FC~~Ci~~~~~~-~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 29 EAKYLCSACRNVLRRPFQAQCG-----HRYCSFCLASILSS-GPQNCAACVHEGI 77 (141)
T ss_dssp CGGGBCTTTCSBCSSEEECTTS-----CEEEHHHHHHHGGG-SCEECHHHHHTTC
T ss_pred CcCcCCCCCChhhcCcEECCCC-----CccCHHHHHHHHhc-CCCCCCCCCCccc
Confidence 45568999985 4567666653 45789999999964 4468999998653
No 66
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.66 E-value=1.7 Score=31.58 Aligned_cols=42 Identities=21% Similarity=0.532 Sum_probs=31.2
Q ss_pred CCeeeEecc-CCCCccccccccCCCcc-ccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 88 APVCRICHG-SHENLKALCECRGTMGL-VHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 88 ~~~CRIC~g-e~~~LIsPC~CkGSl~~-VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
...|.||++ ..++...||. +. ....|+.+ ...|++|+.++..
T Consensus 25 ~~~C~IC~~~~~~~~~~pCg-----H~~~C~~C~~~------~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 25 EKLCKICMDRNIAIVFVPCG-----HLVTCKQCAEA------VDKCPMCYTVITF 68 (75)
T ss_dssp HHSCSSSCSSCCCBCCSSSC-----CCCBCHHHHHH------CSBCTTTCCBCCC
T ss_pred CCCCCcCCCCCCCEEEecCC-----CHHHHHHHhhC------CCCCccCCceecC
Confidence 347999995 5677778983 33 67889853 3689999998764
No 67
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=69.55 E-value=1.5 Score=32.35 Aligned_cols=49 Identities=14% Similarity=0.293 Sum_probs=34.7
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHHh--cCCcccCCCCce
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLSE--SGRSCCEICNFK 137 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~~ 137 (306)
+..+..|.+|.+. +.|+. |.+=-+..|..||.--+.. .+...|..|...
T Consensus 9 ~~~~~~C~vC~~~-~~ll~---Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 9 LAPGARCGVCGDG-TDVLR---CTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCTTCCCTTTSCC-TTCEE---CSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCCCcCCCCCC-CeEEE---CCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4566789999643 34543 4444588999999777655 367899999764
No 68
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=69.10 E-value=3.3 Score=38.64 Aligned_cols=56 Identities=13% Similarity=0.280 Sum_probs=41.0
Q ss_pred CCCCCeeeEecc-CCCCccc-cccccCCCccccHHHHHHHHHhcCCcccCC--CCceeeeeeecc
Q psy3674 85 DENAPVCRICHG-SHENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEI--CNFKYKFKRTLK 145 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CEL--Ck~~Y~~~~~~k 145 (306)
....-.|-||.+ -.+|..+ .|. +-.=+.|+.+|+...+...|++ |+..+....+..
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CG-----HsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~p 237 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCN-----HVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVR 237 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSC-----CEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEE
T ss_pred CceeeECcCccCcccCCeeeCCCC-----CcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCc
Confidence 445678999974 4566653 554 3355789999998877889999 999988755543
No 69
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=62.30 E-value=1.1 Score=42.51 Aligned_cols=44 Identities=23% Similarity=0.436 Sum_probs=33.5
Q ss_pred CCCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeee
Q psy3674 87 NAPVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKF 140 (306)
Q Consensus 87 ~~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~ 140 (306)
++..|.||++ ..++...||.=. .....|+.+| ..|++|+..+.-
T Consensus 294 ~~~~C~IC~~~~~~~v~lpCgH~----~fC~~C~~~~------~~CP~CR~~i~~ 338 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFIPCGHL----VVCQECAPSL------RKCPICRGIIKG 338 (345)
T ss_dssp TTCBCTTTSSSBCCEEEETTCCE----EECTTTGGGC------SBCTTTCCBCCE
T ss_pred CCCCCCccCCcCCceEEcCCCCh----hHhHHHHhcC------CcCCCCCCCccC
Confidence 4578999995 467777788532 2667899888 689999998864
No 70
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=50.00 E-value=2 Score=33.27 Aligned_cols=51 Identities=25% Similarity=0.416 Sum_probs=31.1
Q ss_pred CCCCCCeeeEec-cC---CCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCce
Q psy3674 84 HDENAPVCRICH-GS---HENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFK 137 (306)
Q Consensus 84 ~s~~~~~CRIC~-ge---~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~ 137 (306)
...+...|.+|. ++ ++.|+. | .+=-..+|..|+.-=..-.+.+.|..|...
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~-C--D~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILF-C--DMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEE-C--SSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEE-C--CCCCchhhcccCCCCccCCCceECccccCc
Confidence 345778999998 32 234442 2 233367899998632233467778877554
No 71
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.87 E-value=12 Score=27.95 Aligned_cols=49 Identities=24% Similarity=0.592 Sum_probs=34.4
Q ss_pred CCCeeeEeccC--CCCcc--ccccccCCCccccHHHHHHHHHhc---C---CcccCC--CCceeee
Q psy3674 87 NAPVCRICHGS--HENLK--ALCECRGTMGLVHAECLTQWLSES---G---RSCCEI--CNFKYKF 140 (306)
Q Consensus 87 ~~~~CRIC~ge--~~~LI--sPC~CkGSl~~VH~~CL~~Wl~~s---~---~~~CEL--Ck~~Y~~ 140 (306)
+...|-||+++ ....+ .||. +..-+.||.+++..+ + ...|+. |+..+.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~Cg-----H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~ 64 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQ-----CIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHL 64 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTT-----EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEE
T ss_pred CCcCCcccCcccccccceEcCCCC-----CcccHHHHHHHHHHHhhcCCcccccCccccCCCCCcc
Confidence 45689999964 22233 3675 457789999999764 2 468999 9998544
No 72
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=45.25 E-value=15 Score=30.70 Aligned_cols=48 Identities=27% Similarity=0.479 Sum_probs=33.5
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHH------H---hcCCcccCCCCc
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWL------S---ESGRSCCEICNF 136 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl------~---~s~~~~CELCk~ 136 (306)
+.++..|++|. +.+.|+ -|.+--+-.|..||.+=+ + .++.+.|-.|.-
T Consensus 54 Dg~~~~C~vC~-dGG~Ll---cCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCA-EGGNLI---CCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTC-CCSEEE---ECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecC-CCCeeE---ecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45677899995 445555 234445889999999742 2 357899999943
No 73
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=45.03 E-value=10 Score=26.98 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=32.2
Q ss_pred CeeeEecc-CCCCccc-cccccCCCccccHHHHHHHHHhcCCcccCCCCceeeeee
Q psy3674 89 PVCRICHG-SHENLKA-LCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFKR 142 (306)
Q Consensus 89 ~~CRIC~g-e~~~LIs-PC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~~ 142 (306)
-.|-||++ -.+|.+. +|. .-.=+.|+++|+...+ .|.+++.+...+.
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG-----~~yer~~I~~~l~~~~--~cP~t~~~L~~~~ 52 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSR-----TIFEKSLLEQYVKDTG--NDPITNEPLSIEE 52 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTT-----EEEEHHHHHHHHHHHS--BCTTTCCBCCGGG
T ss_pred EEecCCCCCCCCCEEeCCCC-----cEEcHHHHHHHHHhCC--CCcCCcCCCChhh
Confidence 35777763 2456655 332 4466889999998765 3999998877543
No 74
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=42.50 E-value=14 Score=31.27 Aligned_cols=48 Identities=27% Similarity=0.472 Sum_probs=33.4
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHH---------hcCCcccCCCCc
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLS---------ESGRSCCEICNF 136 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~---------~s~~~~CELCk~ 136 (306)
+..++.|++|. +.+.|+ .|.+=-+-.|..||..=+. .++.+.|..|..
T Consensus 60 Dg~~d~C~vC~-~GG~Ll---cCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 60 DGMDEQCRWCA-EGGNLI---CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TSCBCSCSSSC-CCSSEE---ECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCeecccC-CCCcEE---eCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 44678999995 444555 2233347789999986552 468999999974
No 75
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=39.70 E-value=49 Score=26.44 Aligned_cols=51 Identities=25% Similarity=0.562 Sum_probs=34.1
Q ss_pred CCCCCeeeEecc-----CCCCcccccc-ccCCCccccHHHHHHHHHhcCCcccCCCCceee
Q psy3674 85 DENAPVCRICHG-----SHENLKALCE-CRGTMGLVHAECLTQWLSESGRSCCEICNFKYK 139 (306)
Q Consensus 85 s~~~~~CRIC~g-----e~~~LIsPC~-CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~ 139 (306)
..+..+|.||-+ .++.+.--|+ |. --|=+.|++-=++. ++..|..|+++|.
T Consensus 13 ~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~---FPvCrpCyEYErke-G~q~CpqCktrYk 69 (93)
T 1weo_A 13 NLDGQFCEICGDQIGLTVEGDLFVACNECG---FPACRPCYEYERRE-GTQNCPQCKTRYK 69 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSC---CCCCHHHHHHHHHT-SCSSCTTTCCCCC
T ss_pred ccCCCccccccCccccCCCCCEEEeeeccC---ChhhHHHHHHHHhc-cCccccccCCccc
Confidence 346689999962 2444444443 32 23778898765543 6778999999997
No 76
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=32.76 E-value=9.9 Score=28.14 Aligned_cols=44 Identities=18% Similarity=0.491 Sum_probs=31.3
Q ss_pred CCeeeEecc-CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCceeeee
Q psy3674 88 APVCRICHG-SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNFKYKFK 141 (306)
Q Consensus 88 ~~~CRIC~g-e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~~Y~~~ 141 (306)
...|.||++ ..++...||.=. ..=..|+.+| ..|++|+..+...
T Consensus 18 ~~~C~IC~~~~~~~v~~pCgH~----~~C~~C~~~~------~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 18 AMLCMVCCEEEINSTFCPCGHT----VCCESCAAQL------QSCPVCRSRVEHV 62 (79)
T ss_dssp HTBCTTTSSSBCCEEEETTCBC----CBCHHHHTTC------SBCTTTCCBCCEE
T ss_pred CCEeEEeCcccCcEEEECCCCH----HHHHHHHHhc------CcCCCCCchhhCe
Confidence 357999995 456777898532 1335788766 3899999988753
No 77
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=31.57 E-value=7.9 Score=27.69 Aligned_cols=48 Identities=19% Similarity=0.517 Sum_probs=31.9
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHHh--cCCcccCCCCc
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLSE--SGRSCCEICNF 136 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~ 136 (306)
..+...|.+|... +.|+. |.+=-+..|..||..=+.. ++...|..|..
T Consensus 8 ~~~~~~C~vC~~~-g~ll~---CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 8 TDHQDYCEVCQQG-GEIIL---CDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SCCCSSCTTTSCC-SSEEE---CSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCCccCCCC-CcEEE---CCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 4567899999743 34443 3344478999998754322 36788998865
No 78
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=30.08 E-value=3.6 Score=35.80 Aligned_cols=50 Identities=26% Similarity=0.497 Sum_probs=33.9
Q ss_pred CCCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHHh--cCCcccCCCCcee
Q psy3674 85 DENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLSE--SGRSCCEICNFKY 138 (306)
Q Consensus 85 s~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~~Y 138 (306)
..+.+.|.+|.+.+ .|+. |.|--+..|..||..-+.. .+.+.|..|...-
T Consensus 4 d~~~~~C~~C~~~g-~ll~---Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQNGG-DLLC---CEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTCCCE-EEEE---CSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC-ceEE---cCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 34667899997332 3442 5555588999998655433 4678999998654
No 79
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=27.63 E-value=6.1 Score=33.56 Aligned_cols=48 Identities=25% Similarity=0.521 Sum_probs=32.5
Q ss_pred CCCCeeeEeccCCCCccccccccCCCccccHHHHHHHHHh--cCCcccCCCCce
Q psy3674 86 ENAPVCRICHGSHENLKALCECRGTMGLVHAECLTQWLSE--SGRSCCEICNFK 137 (306)
Q Consensus 86 ~~~~~CRIC~ge~~~LIsPC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~~ 137 (306)
.+.+.|.+|.+. +.|+ .|.|--+..|..||..-+.. .+.+.|..|...
T Consensus 2 ~~~~~C~~C~~~-g~ll---~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 2 PNEDWCAVCQNG-GELL---CCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp CSCSSCTTTCCC-SSCE---ECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCccccCCCC-Ceee---ecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 356789999733 3343 24455588999998655443 367899999864
No 80
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=27.48 E-value=8.1 Score=30.25 Aligned_cols=37 Identities=16% Similarity=0.334 Sum_probs=24.7
Q ss_pred CCCCCeeeEecc--CCCCccccccccCCCccccHHHHHHHHH
Q psy3674 85 DENAPVCRICHG--SHENLKALCECRGTMGLVHAECLTQWLS 124 (306)
Q Consensus 85 s~~~~~CRIC~g--e~~~LIsPC~CkGSl~~VH~~CL~~Wl~ 124 (306)
..+++.|.+|.+ +.++|+. |.+=-+..|..||.-...
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~---C~~C~~~~H~~Cl~~~~~ 42 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFF---CTTCGQHYHGMCLDIAVT 42 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEE---CSSSCCEECTTTTTCCCC
T ss_pred CCCCCCCcCCCCCCCCcCCeE---CCCCCCCcChHHhCCccc
Confidence 447889999983 3345552 234347899999976653
No 81
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=27.24 E-value=13 Score=27.52 Aligned_cols=48 Identities=23% Similarity=0.607 Sum_probs=31.6
Q ss_pred CCCCCeeeEecc-CCCCccc--cccccCCCccccHHHHHHHHHh--cCCcccCCCCce
Q psy3674 85 DENAPVCRICHG-SHENLKA--LCECRGTMGLVHAECLTQWLSE--SGRSCCEICNFK 137 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIs--PC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~~ 137 (306)
+.+...| ||.. +.+.+|. -|.|. ..+.|..|+. |.. .+...|+.|...
T Consensus 13 ~~~~~~C-~C~~~~~g~MI~CD~~~C~--~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 13 PNEPTYC-LCHQVSYGEMIGCDNPDCS--IEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp TTSCCCS-TTCCCSCSSEECCSCSSCS--CCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCCCCEE-ECCCCCCCCEeEeeCCCCC--CccEecccCC--cCcCCCCCEECCCCCcc
Confidence 4566788 8984 3456663 22354 2689999987 433 367899999654
No 82
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=22.02 E-value=31 Score=18.45 Aligned_cols=13 Identities=15% Similarity=0.398 Sum_probs=10.5
Q ss_pred cccCCCCceeeee
Q psy3674 129 SCCEICNFKYKFK 141 (306)
Q Consensus 129 ~~CELCk~~Y~~~ 141 (306)
..|+.|+..|...
T Consensus 4 ~~C~~C~k~f~~~ 16 (27)
T 2kvh_A 4 FSCSLCPQRSRDF 16 (27)
T ss_dssp EECSSSSCEESSH
T ss_pred ccCCCcChhhCCH
Confidence 4799999999753
No 83
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=21.88 E-value=26 Score=27.42 Aligned_cols=48 Identities=23% Similarity=0.607 Sum_probs=31.5
Q ss_pred CCCCCeeeEecc-CCCCccc--cccccCCCccccHHHHHHHHHh--cCCcccCCCCce
Q psy3674 85 DENAPVCRICHG-SHENLKA--LCECRGTMGLVHAECLTQWLSE--SGRSCCEICNFK 137 (306)
Q Consensus 85 s~~~~~CRIC~g-e~~~LIs--PC~CkGSl~~VH~~CL~~Wl~~--s~~~~CELCk~~ 137 (306)
+.+...| ||.. +.+.+|. -|.|. ..+.|..|+. |.. .+...|+.|...
T Consensus 33 ~~e~~yC-iC~~~~~g~MI~CD~~dC~--~~WfH~~CVg--l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 33 PNEPTYC-LCHQVSYGEMIGCDNPDCS--IEWFHFACVG--LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp SCCCBCS-TTCCBCCSCCCCCSCSSCS--CCCCCSTTTT--CSSCCCSSCCCTTTCCC
T ss_pred CCCCcEE-ECCCCCCCCEeEecCCCCC--CCCEecccCC--cCcCCCCCEECcCccCc
Confidence 4466778 9984 3456663 33354 2689999987 333 367899999753
No 84
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=21.55 E-value=10 Score=28.22 Aligned_cols=49 Identities=27% Similarity=0.450 Sum_probs=29.6
Q ss_pred CCCCCeeeEec-c---CCCCccccccccCCCccccHHHHHHHHHhcCCcccCCCCc
Q psy3674 85 DENAPVCRICH-G---SHENLKALCECRGTMGLVHAECLTQWLSESGRSCCEICNF 136 (306)
Q Consensus 85 s~~~~~CRIC~-g---e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~s~~~~CELCk~ 136 (306)
..+...|.||. + +++.|+- | .+=-..+|..||.-=..-.+...|..|..
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~-C--D~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILF-C--DMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEE-C--SSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEE-C--CCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 34677899998 3 2345543 2 23336899999863222346677777743
No 85
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=20.62 E-value=32 Score=18.13 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=9.8
Q ss_pred ccCCCCceeeee
Q psy3674 130 CCEICNFKYKFK 141 (306)
Q Consensus 130 ~CELCk~~Y~~~ 141 (306)
.|+.|+..|...
T Consensus 3 ~C~~C~k~f~~~ 14 (27)
T 1znf_A 3 KCGLCERSFVEK 14 (27)
T ss_dssp BCSSSCCBCSSH
T ss_pred cCCCCCCcCCCH
Confidence 699999988753
No 86
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=20.59 E-value=14 Score=30.79 Aligned_cols=49 Identities=20% Similarity=0.452 Sum_probs=31.8
Q ss_pred CCCCCeeeEecc---CCCCccccccccCCCccccHHHHHHHHHh---cCCcccCCCCce
Q psy3674 85 DENAPVCRICHG---SHENLKALCECRGTMGLVHAECLTQWLSE---SGRSCCEICNFK 137 (306)
Q Consensus 85 s~~~~~CRIC~g---e~~~LIsPC~CkGSl~~VH~~CL~~Wl~~---s~~~~CELCk~~ 137 (306)
+++...| +|.. +++.++.=-.|. .+.|..|+.-=-.. .+...|+.|...
T Consensus 5 ~~~~~~C-~C~~~~~~~~~mi~Cd~C~---~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 5 SDTKLYC-ICKTPEDESKFYIGCDRCQ---NWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp --CCEET-TTTEECCTTSCEEECTTTC---CEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCCcEe-eCCCCCCCCCCEeECCCCC---chhChhhcCCchhhccCccCeecCCCcch
Confidence 4567789 9982 345667644565 89999998532222 357789999754
Done!