Query psy368
Match_columns 320
No_of_seqs 227 out of 619
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 22:50:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy368.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/368hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3775|consensus 100.0 5.3E-62 1.2E-66 469.2 15.9 281 7-317 161-482 (482)
2 cd01212 JIP JNK-interacting pr 100.0 5.4E-46 1.2E-50 323.4 16.2 141 176-317 2-148 (148)
3 cd01273 CED-6 CED-6 Phosphotyr 100.0 1.2E-36 2.6E-41 262.3 15.8 126 174-306 6-142 (142)
4 cd01268 Numb Numb Phosphotyros 100.0 1.4E-36 3.1E-41 261.5 15.6 126 173-305 10-136 (138)
5 cd01267 CED6_AIDA1b Phosphotyr 100.0 3.3E-35 7.2E-40 249.4 15.8 122 177-305 2-132 (132)
6 cd01274 AIDA-1b AIDA-1b Phosph 100.0 1.5E-34 3.4E-39 245.7 15.2 121 177-305 2-127 (127)
7 cd01216 Fe65 Fe65 Phosphotyros 100.0 1.1E-32 2.4E-37 233.1 15.5 120 177-305 2-123 (123)
8 cd01270 DYC-1 DYC-1 (DYB-1 bin 100.0 4.2E-32 9E-37 234.0 15.2 125 176-302 2-139 (140)
9 cd01271 Fe65_C Fe65 C-terminal 100.0 4.1E-31 8.9E-36 222.9 14.0 121 177-305 2-124 (124)
10 smart00462 PTB Phosphotyrosine 100.0 2E-30 4.3E-35 216.6 17.4 127 175-308 2-132 (134)
11 PF00640 PID: Phosphotyrosine 100.0 2.9E-30 6.2E-35 216.4 15.8 121 179-306 1-139 (140)
12 cd01215 Dab Disabled (Dab) Pho 100.0 3.6E-30 7.9E-35 221.7 14.7 127 171-305 7-137 (139)
13 cd00934 PTB Phosphotyrosine-bi 100.0 7.2E-29 1.6E-33 203.3 15.1 119 176-301 1-123 (123)
14 cd01208 X11 X11 Phosphotyrosin 100.0 7.9E-28 1.7E-32 210.1 16.0 123 174-307 2-153 (156)
15 cd01214 CG8312 CG8312 Phosphot 99.9 5.3E-27 1.2E-31 200.6 13.0 120 178-306 3-131 (133)
16 cd01209 SHC SHC phosphotyrosin 99.9 5.1E-27 1.1E-31 205.9 12.1 124 173-304 7-160 (160)
17 KOG3537|consensus 99.9 9E-27 2E-31 228.9 13.5 154 142-306 4-160 (543)
18 cd01213 tensin Tensin Phosphot 99.9 4.6E-23 9.9E-28 177.8 12.2 114 175-294 4-134 (138)
19 PF14719 PID_2: Phosphotyrosin 99.9 1.4E-22 3.1E-27 181.8 13.7 120 178-306 1-128 (182)
20 KOG3536|consensus 99.9 1.3E-23 2.8E-28 199.4 1.4 127 175-308 45-178 (321)
21 cd01269 PLX Pollux (PLX) Phosp 99.8 5E-18 1.1E-22 143.4 11.8 117 177-300 2-128 (129)
22 cd01211 GAPCenA GAPCenA Phosph 99.7 1.5E-17 3.2E-22 140.5 11.9 111 180-297 5-124 (125)
23 KOG3605|consensus 99.7 5E-18 1.1E-22 173.7 7.2 132 173-313 446-614 (829)
24 KOG1930|consensus 99.6 7.8E-16 1.7E-20 151.5 10.7 115 174-294 342-470 (483)
25 KOG3535|consensus 99.6 1.7E-15 3.6E-20 149.3 12.4 128 169-305 41-175 (557)
26 cd01272 FE65_N Fe65 Phosphotyr 99.6 1.1E-14 2.4E-19 124.2 12.9 116 177-299 2-132 (138)
27 PF08416 PTB: Phosphotyrosine- 99.6 1.8E-14 3.8E-19 123.3 14.1 114 178-298 1-122 (131)
28 KOG3697|consensus 99.3 4E-13 8.8E-18 127.5 3.0 137 173-318 13-184 (345)
29 PF14604 SH3_9: Variant SH3 do 99.3 7.9E-13 1.7E-17 94.9 3.0 49 86-160 1-49 (49)
30 KOG4225|consensus 99.3 2.6E-12 5.7E-17 127.5 3.5 54 84-161 435-488 (489)
31 KOG4225|consensus 99.2 1.9E-11 4.1E-16 121.5 4.0 67 72-164 221-287 (489)
32 KOG1118|consensus 99.1 3.7E-11 8.1E-16 115.2 4.4 60 77-162 302-361 (366)
33 KOG4348|consensus 99.1 4.8E-11 1E-15 118.8 2.9 73 68-166 87-159 (627)
34 cd01217 CG12581 CG12581 Phosph 99.0 3.4E-09 7.4E-14 92.4 12.3 118 177-309 2-154 (158)
35 PF00018 SH3_1: SH3 domain; I 99.0 1.8E-10 3.8E-15 81.6 3.0 48 85-156 1-48 (48)
36 KOG4226|consensus 99.0 4.8E-10 1E-14 106.5 5.2 68 71-164 97-164 (379)
37 PF07653 SH3_2: Variant SH3 do 98.9 5.4E-10 1.2E-14 81.3 2.8 52 84-161 2-54 (55)
38 KOG2070|consensus 98.9 4.7E-10 1E-14 113.2 3.2 56 83-164 19-74 (661)
39 smart00326 SH3 Src homology 3 98.9 1.8E-09 3.9E-14 76.0 4.0 55 82-161 3-57 (58)
40 PF10480 ICAP-1_inte_bdg: Beta 98.8 1.1E-07 2.5E-12 86.0 14.9 122 174-302 58-196 (200)
41 cd00174 SH3 Src homology 3 dom 98.8 7E-09 1.5E-13 72.2 4.6 53 83-160 1-53 (54)
42 KOG4448|consensus 98.7 9.1E-08 2E-12 92.6 12.0 123 175-306 59-190 (374)
43 KOG2199|consensus 98.7 6.4E-09 1.4E-13 102.8 1.6 58 80-163 214-271 (462)
44 KOG0162|consensus 98.7 7.3E-08 1.6E-12 101.1 8.8 60 76-161 1046-1105(1106)
45 KOG1029|consensus 98.6 2.3E-08 4.9E-13 105.2 4.8 57 82-164 1054-1110(1118)
46 KOG2856|consensus 98.6 4.8E-08 1E-12 96.0 6.2 71 66-161 396-470 (472)
47 KOG4348|consensus 98.5 1.1E-07 2.5E-12 95.1 4.9 56 82-163 262-319 (627)
48 KOG3523|consensus 98.5 2.4E-08 5.1E-13 103.0 -0.4 59 84-166 611-669 (695)
49 KOG2996|consensus 98.3 4.1E-07 8.8E-12 93.8 4.7 55 81-161 805-861 (865)
50 KOG1702|consensus 98.3 2.6E-07 5.6E-12 84.9 2.9 57 81-161 207-263 (264)
51 KOG1029|consensus 98.3 4.1E-07 8.8E-12 96.0 3.2 59 82-166 694-754 (1118)
52 KOG2546|consensus 98.0 5.1E-06 1.1E-10 83.1 3.7 55 82-162 424-478 (483)
53 cd01210 EPS8 Epidermal growth 97.8 0.00017 3.8E-09 61.9 10.2 114 178-298 3-124 (127)
54 KOG3601|consensus 97.7 2.4E-05 5.2E-10 72.3 2.9 57 81-163 163-219 (222)
55 KOG1264|consensus 97.7 2.2E-05 4.8E-10 83.8 2.8 62 80-166 773-834 (1267)
56 KOG3875|consensus 97.4 2.9E-05 6.4E-10 75.3 -0.5 61 82-166 269-334 (362)
57 KOG4792|consensus 97.3 0.00016 3.5E-09 67.8 3.2 56 82-162 125-180 (293)
58 KOG3655|consensus 97.2 0.00018 3.8E-09 73.1 2.8 57 80-161 426-482 (484)
59 KOG4278|consensus 97.2 0.00033 7.1E-09 74.0 4.1 56 83-164 92-148 (1157)
60 KOG1843|consensus 97.1 0.00073 1.6E-08 67.8 5.2 53 82-160 417-471 (473)
61 KOG0507|consensus 97.0 4.3E-05 9.4E-10 81.1 -4.4 125 175-306 505-639 (854)
62 KOG4792|consensus 96.9 0.0025 5.3E-08 60.0 6.9 63 78-166 224-288 (293)
63 KOG4226|consensus 96.9 0.00085 1.8E-08 64.6 3.7 60 80-164 190-251 (379)
64 KOG4429|consensus 96.8 0.0008 1.7E-08 65.3 2.9 60 77-162 359-418 (421)
65 KOG4575|consensus 96.0 0.0065 1.4E-07 64.0 4.3 56 80-160 7-63 (874)
66 KOG2528|consensus 96.0 0.0031 6.8E-08 63.9 1.9 56 83-163 4-60 (490)
67 KOG0197|consensus 96.0 0.0043 9.3E-08 63.6 2.7 58 81-162 11-69 (468)
68 KOG3632|consensus 95.8 0.034 7.4E-07 61.2 8.6 64 77-165 443-513 (1335)
69 KOG0515|consensus 95.7 0.0065 1.4E-07 63.1 2.5 52 82-159 684-738 (752)
70 cd00900 PH-like Pleckstrin hom 95.6 0.14 3.1E-06 37.8 9.2 77 210-295 17-98 (99)
71 KOG3705|consensus 95.6 0.01 2.2E-07 60.0 3.5 53 83-159 511-563 (580)
72 KOG1451|consensus 95.6 0.015 3.1E-07 61.1 4.5 56 80-161 755-811 (812)
73 KOG3632|consensus 95.4 0.018 3.8E-07 63.4 4.5 63 78-166 1135-1206(1335)
74 KOG4773|consensus 95.3 0.0033 7.1E-08 62.1 -0.9 61 77-163 171-231 (386)
75 KOG3557|consensus 95.1 0.029 6.3E-07 59.3 5.2 118 175-299 44-169 (721)
76 KOG2222|consensus 94.0 0.014 3.1E-07 60.0 -0.2 55 82-163 549-604 (848)
77 KOG2996|consensus 93.8 0.039 8.5E-07 58.0 2.5 68 98-190 627-695 (865)
78 KOG3771|consensus 93.8 0.062 1.3E-06 54.9 3.9 38 82-119 401-439 (460)
79 KOG4458|consensus 93.5 0.041 8.9E-07 42.5 1.6 34 175-208 32-65 (78)
80 KOG0199|consensus 92.9 0.11 2.4E-06 56.2 4.2 55 80-160 375-430 (1039)
81 KOG3725|consensus 92.4 0.13 2.8E-06 49.5 3.6 54 81-160 317-372 (375)
82 KOG3557|consensus 91.8 0.16 3.6E-06 53.9 3.9 60 81-166 500-559 (721)
83 KOG0507|consensus 91.0 0.059 1.3E-06 58.1 -0.4 85 213-306 758-844 (854)
84 KOG3565|consensus 90.7 0.41 8.9E-06 51.2 5.5 59 81-163 578-637 (640)
85 KOG0609|consensus 90.0 0.21 4.5E-06 52.1 2.5 40 82-121 215-261 (542)
86 KOG3601|consensus 86.1 0.26 5.7E-06 46.0 0.4 50 84-159 3-53 (222)
87 PF02174 IRS: PTB domain (IRS- 83.3 23 0.0005 28.8 10.8 74 212-299 21-97 (100)
88 KOG4436|consensus 74.9 1.5 3.3E-05 48.0 1.5 54 247-300 95-153 (948)
89 cd00824 PTBI IRS-like phosphot 74.0 39 0.00084 28.2 9.3 77 212-302 20-99 (104)
90 smart00310 PTBI Phosphotyrosin 68.8 48 0.001 27.4 8.7 74 212-299 19-95 (98)
91 KOG3416|consensus 57.8 5.6 0.00012 34.6 1.4 31 99-153 61-91 (134)
92 cd01203 DOK_PTB Downstream of 57.3 75 0.0016 26.7 7.9 74 212-299 20-96 (104)
93 smart00743 Agenet Tudor-like d 53.3 12 0.00026 27.2 2.3 23 99-121 2-24 (61)
94 PF11302 DUF3104: Protein of u 44.2 22 0.00047 28.2 2.6 24 98-121 4-33 (75)
95 PF03894 XFP: D-xylulose 5-pho 41.6 4.2 9.1E-05 37.1 -2.0 53 80-157 36-90 (179)
96 KOG4384|consensus 34.1 1.3E+02 0.0028 30.5 6.7 58 83-166 138-197 (361)
97 smart00287 SH3b Bacterial SH3 33.3 41 0.00089 23.9 2.5 20 100-119 27-46 (63)
98 PF08239 SH3_3: Bacterial SH3 29.2 38 0.00081 23.6 1.6 35 100-159 19-54 (55)
99 PF11717 Tudor-knot: RNA bindi 24.2 98 0.0021 22.3 3.1 21 100-121 1-21 (55)
100 KOG3536|consensus 23.4 10 0.00023 37.4 -2.8 116 174-296 96-227 (321)
101 PF06017 Myosin_TH1: Myosin ta 22.7 5.6E+02 0.012 23.0 9.8 83 210-299 63-145 (199)
102 cd01208 X11 X11 Phosphotyrosin 21.4 30 0.00066 31.0 -0.1 38 102-139 2-42 (156)
103 KOG0040|consensus 21.3 7.9 0.00017 45.5 -4.6 60 80-165 967-1026(2399)
No 1
>KOG3775|consensus
Probab=100.00 E-value=5.3e-62 Score=469.16 Aligned_cols=281 Identities=44% Similarity=0.687 Sum_probs=247.2
Q ss_pred CCCCCCCCchhHHhcccC-------------------CCCccCCCCCCCCcccc--cCCCCCCcccccccCCCC------
Q psy368 7 TQPPHSVPSLADELGDLS-------------------PWSQETDSTIDSDTERY--YPSIDSGLSLVSHHNLHD------ 59 (320)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~------ 59 (320)
.--+.+|..++||..++. ++++ ||++ +++++. +-++|+++.+. |++.+
T Consensus 161 ~yd~vkytlvvDEh~qlelvslrpc~g~g~d~s~d~cg~~s-E~e~--~~~~~~~~~~s~ds~~~~~--~s~~~kk~l~~ 235 (482)
T KOG3775|consen 161 VYDAVKYTLVVDEHTQLELVSLRPCAGLGHDSSEDSCGEAS-EEEA--GAALLGGGQVSGDSSPDSP--DSTFSKKFLNV 235 (482)
T ss_pred cccccceeeeeehhhcccccccccccccCcccccccccccc-cccc--cccccCCcccccccCCCCc--cchhhhhhccc
Confidence 334567889999988876 2334 6666 889988 47888888888 66555
Q ss_pred ---CCCccCCCCC--CCCCCccccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceeccccccccccccccccc
Q psy368 60 ---STISSRSASP--VTLPPSKLELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASS 134 (320)
Q Consensus 60 ---~~~~~~~~~~--~~~p~~~~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~s 134 (320)
|++++.++.+ +.++...+|..++|||++|+|+|||+|||+|+|||.|+|..+.+|.|++|
T Consensus 236 ~~~s~~~~s~a~~~~g~s~~~~~e~qe~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G--------------- 300 (482)
T KOG3775|consen 236 FVNSTSRSSSAESFGGFSCLVNGEEQEQTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEG--------------- 300 (482)
T ss_pred ceecccccccCCCCCccccccchhhhchhhhhhhhccCCCcceeeeecCCeeEeeecccchhhcc---------------
Confidence 4555444333 44899999999999999999999999999999999999999999999999
Q ss_pred CCCCcccceecccCCcccccccCCcccccccccccCCCC---CCceeEEEEecCceEecCCCchHHHHHHHHHHHhcC--
Q psy368 135 RLPTPWMLRVNLRTGRQGIFPSAYAVDVEYEDLQTTTPK---PKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ-- 209 (320)
Q Consensus 135 r~~~~~~~~~nlrtg~~GifP~~yv~~~~~~~~~~~~~~---~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~-- 209 (320)
+|||||++||||+.|+.+|+.++++...++ ....+|.++|||||||..+||++|+++||+||..+.
T Consensus 301 ---------~NlRTG~~GIFPA~ya~evd~~eed~lg~l~~~~~~erf~l~~LgSVEv~~HKGngVlcqAm~KI~t~ykn 371 (482)
T KOG3775|consen 301 ---------FNLRTGERGIFPAFYAHEVDGPEEDLLGSLRSPCWVERFDLQFLGSVEVPCHKGNGVLCQAMQKIATAYKN 371 (482)
T ss_pred ---------ccccccccccccceeEEecCCchhhhhhccCCccchhheeeeeeeeeEeecccCccHHHHHHHHHHHHhcC
Confidence 999999999999999999999888776543 567999999999999999999999999999999984
Q ss_pred ----CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCC
Q psy368 210 ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASES 285 (320)
Q Consensus 210 ----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~s 285 (320)
..|+.|.|+||.+||++.+...+. +.+..+..|||.++|||||++||+|.++|+||+|++...+|+||||++.++
T Consensus 372 s~~~~~p~s~~lEislRgV~~s~k~~~~-~~k~~~c~~f~~lknisfc~~hpr~n~~~gfitkhp~~~rfachVfks~es 450 (482)
T KOG3775|consen 372 SVHLRPPASCVLEISLRGVKLSLKGGGP-EFKFQRCSHFFQLKNISFCGCHPRNNCYFGFITKHPLLSRFACHVFKSQES 450 (482)
T ss_pred CccccCcchhhhhhhcceeEeecCCCCc-cccccccceeeEecccceeccccccceEEEeeccchhhhheeeeeeecccC
Confidence 357999999999999999887663 233455579999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q psy368 286 TRPVAEAVGRAFQRFYEKFIETAFPIEDIYIE 317 (320)
Q Consensus 286 A~~Ia~AIG~AFqvayq~~l~~a~p~edi~~e 317 (320)
.++||++||+||+.+||+||+++||+||||||
T Consensus 451 ~rpvA~sVgRaF~~~yq~fl~~a~p~edIyLe 482 (482)
T KOG3775|consen 451 TRPVAESVGRAFQEFYQEFLEYACPTEDIYLE 482 (482)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcCCccceeeC
Confidence 99999999999999999999999999999997
No 2
>cd01212 JIP JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JIP is a mitogen-activated protein kinase scaffold protein. JIP consists of a C-terminal SH3 domain, followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=5.4e-46 Score=323.37 Aligned_cols=141 Identities=68% Similarity=1.196 Sum_probs=129.7
Q ss_pred ceeEEEEecCceEecCCCchHHHHHHHHHHHhcC------CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccce
Q psy368 176 RERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ------HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKN 249 (320)
Q Consensus 176 ~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~------~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ 249 (320)
..+|.|||||||+|.+++|++|+++||++|++.+ +++++|.|.||.+||+|+|..++. ..+..|.+.|++|+|
T Consensus 2 ~~~f~vkyLGsveV~~~kG~~v~~~A~rki~~~~k~~~~~~~~~~v~L~VS~~Girl~D~~t~~-~~~~~~~~~f~~l~n 80 (148)
T cd01212 2 KERFLLGYLGSVEVLAHKGNGVLCQAMRKIVGEYKNSEESPTPQTCILEISDRGLRMVDRSGPN-KDKKPCIDFFYSLKN 80 (148)
T ss_pred CceEEeEecceEEecCCCCcHHHHHHHHHHHHHHHhhccCCCCcEEEEEEecCcEEEEecCCCc-ccccchhhccccccc
Confidence 4689999999999999999999999999998763 457999999999999999999873 222346666778999
Q ss_pred eEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q psy368 250 VMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFIETAFPIEDIYIE 317 (320)
Q Consensus 250 ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l~~a~p~edi~~e 317 (320)
|||||.||+|+|+||||+|++.++++.||||.++++|++|+.|||+||++|||+||+++||+||||||
T Consensus 81 ISFCa~d~~~~r~F~FIak~~~~~~~~CHVF~s~~~~~~I~~aIG~AF~~~y~~~~~~~~~~~~~~~~ 148 (148)
T cd01212 81 ISFCGFHPRDHRYFGFITKHPLLQRFACHVFKSSESTRPVAEAVGRAFQRFYQEFIATAYPTEDIYLE 148 (148)
T ss_pred eEEEEEcCCCCcEEEEEeccCCCCceEEEEEEeCCcchHHHHHHHHHHHHHHHHHHhhcCChhhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998
No 3
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=1.2e-36 Score=262.27 Aligned_cols=126 Identities=22% Similarity=0.454 Sum_probs=115.3
Q ss_pred CCceeEEEEecCceEecCCCchHHHHHHHHHHHhcC----------CCCcEEEEEEeCCceEEEeCCCCCccceeeeecc
Q psy368 174 PKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ----------HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDY 243 (320)
Q Consensus 174 ~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~----------~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~ 243 (320)
.++++|.|||||+++|..++|++++++||++|+.++ .|+++|.|+||.+||+|+|.+|+. .+ +
T Consensus 6 ~g~v~f~vkyLG~~eV~~~~g~~v~~eAi~ki~~a~~~k~~~~~~~~k~~~V~L~IS~~GI~v~d~~t~~-----~~--~ 78 (142)
T cd01273 6 NGHVEYVAKFLGCVEVDQPKGSEVVREAIRKLRFARDLKKSEQTRTAKLQKVEIRISIDGVIIAEPKTKA-----PM--H 78 (142)
T ss_pred cCceEEEEEEeeeEEecCCCCchHHHHHHHHHHHHHhhhhccccccccCcEEEEEEECCeEEEEEcCCCc-----EE--E
Confidence 356899999999999999999999999999997431 457999999999999999999983 44 4
Q ss_pred ccccceeEEEEecCCCCceeEEEeeCCCC-ceeeEEEEecCCChHHHHHHHHHHHHHHHHHHHh
Q psy368 244 FYSLKNVMFCGFHPREPCYLGFISKHPNM-QRFACHVFLASESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 244 f~pL~~ISFca~Dp~d~r~FaFIak~~~~-~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
+|+|++||||+.|++|+|+||||++++.. +++.||||.|++.|++|+.+||+||++|||+||+
T Consensus 79 ~~~i~~ISfca~d~~~~r~FayIak~~~~~~~~~ChvF~s~~~A~~I~~tigqAF~~ay~~fl~ 142 (142)
T cd01273 79 TFPLGRISFCADDKDDKRMFSFIAKAEGASGKHSCFVFTSEKLAEDITLTIGQAFDLAYRKFLD 142 (142)
T ss_pred EcCcceEEEEecCCCCCeEEEEEecCCCCCCcEEEEEEeccchHHHHHHHHHHHHHHHHHHHhC
Confidence 59999999999999999999999999976 8999999999999999999999999999999996
No 4
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain. Numb Phosphotyrosine-binding (PTB) domain. Numb is a membrane associated adaptor protein, which is a determinant of asymmetric cell division. Numb has an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=1.4e-36 Score=261.54 Aligned_cols=126 Identities=27% Similarity=0.472 Sum_probs=117.7
Q ss_pred CCCceeEEEEecCceEecCCCchHHHHHHHHHHHhcCCCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEE
Q psy368 173 KPKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMF 252 (320)
Q Consensus 173 ~~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISF 252 (320)
..+.+.|.|||||+++|.+++|++++++||++|+..++|+++|.|+||.+||+|+|.+|+. .+. .+||++|||
T Consensus 10 ~~g~~~f~vKyLG~veV~~~rG~~v~~~A~~klk~~~~k~~kv~L~VS~~Gi~vvd~~Tk~-----~i~--~~~i~~ISf 82 (138)
T cd01268 10 RTGTCSFPVKYLGHVEVDESRGMQVCEDALKRLKASRRKPVKAVLWVSGDGLRVVDEKTKG-----LIV--DQTIEKVSF 82 (138)
T ss_pred hcCceeEEeEecceEEccCcCCChHHHHHHHHHHhhccCCCEEEEEEecCcEEEEecCCCc-----EEE--EEeEEEEEE
Confidence 4578899999999999999999999999999999999999999999999999999999973 444 499999999
Q ss_pred EEecCCCCceeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHHHHHHHHHH
Q psy368 253 CGFHPREPCYLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 253 ca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AFqvayq~~l 305 (320)
|+.|++|+|+||||++++.+++|+||||.|. ++|++|+.|||+||++||++..
T Consensus 83 ca~D~~d~r~FayIakd~~~~r~~CHvF~~~k~sa~~i~~avG~AF~~c~~~~~ 136 (138)
T cd01268 83 CAPDRNFDRGFSYICRDGTTRRWMCHGFLAVKDTGERLSHAVGCAFAACLERKQ 136 (138)
T ss_pred EecCCCCCcEEEEEecCCCcccEEEEEEEeeccchhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999995 7899999999999999998754
No 5
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=3.3e-35 Score=249.41 Aligned_cols=122 Identities=21% Similarity=0.394 Sum_probs=113.1
Q ss_pred eeEEEEecCceEecCCCchHHHHHHHHHHHhcC-------CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccce
Q psy368 177 ERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ-------HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKN 249 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~-------~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ 249 (320)
++|.|||||+++|.+++|++++++||++|+..+ .++++|.|.||.+||+|+|.+|+. .+ +.|||++
T Consensus 2 v~f~vkyLGs~~V~~~~g~~~~~~Ai~~l~~~~~~~~~~~~k~~~V~L~IS~~gi~i~d~~t~~-----~l--~~~~i~~ 74 (132)
T cd01267 2 VVYRAKFLGSLEIGKLKGTEVAREAIRKLKFSRILKTAEWEKIPKVELDISIKGVKIIDPKTKT-----VL--HGHPLYN 74 (132)
T ss_pred cEEEEEEEEEEEecCCCChHHHHHHHHHHHhhhhcchhccCCCCeEEEEEEcCcEEEEeCCCCc-----EE--EEcccce
Confidence 689999999999999999999999999998763 367999999999999999999973 34 3499999
Q ss_pred eEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCC--hHHHHHHHHHHHHHHHHHHH
Q psy368 250 VMFCGFHPREPCYLGFISKHPNMQRFACHVFLASES--TRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 250 ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~s--A~~Ia~AIG~AFqvayq~~l 305 (320)
||||+.|++|+++||||++++..++++||||.|++. |++|+.+||+||++|||+||
T Consensus 75 ISfc~~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~AF~~ay~~~~ 132 (132)
T cd01267 75 ISCCAQDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQAFELAYRLAL 132 (132)
T ss_pred EEEEecCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999889999999999876 99999999999999999996
No 6
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b is an amyloid-beta precursor protein interacting protein. It consists of ankyrin repeats, a SAM domain and a C-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=1.5e-34 Score=245.67 Aligned_cols=121 Identities=19% Similarity=0.334 Sum_probs=111.7
Q ss_pred eeEEEEecCceEecCCCchHHHHHHHHHHHhcC---CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEE
Q psy368 177 ERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ---HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFC 253 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~---~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFc 253 (320)
+.|.||||||++|.+++|++++++||++|+... +|+++|.|.||.+||+|+|.+|+. .+.+ |+|++||||
T Consensus 2 v~f~akyLGs~eV~~~~G~~~~~~Am~kik~~~~~~~k~~~V~L~IS~~Gv~v~d~~tk~-----~i~~--~~i~~ISf~ 74 (127)
T cd01274 2 VVYRAHYLGSLEIGELEGTDSTHAAMTKIKESIIDWETIPRVTLDLTCNGVKFIDETFKT-----LIDG--HGIYNIRCV 74 (127)
T ss_pred cEEEEEccceEEccCCCCcHHHHHHHHHHHHhhhccCCCCEEEEEEeCCeEEEEECCCCe-----EEEE--eeeeEEEEE
Confidence 589999999999999999999999999999875 578999999999999999999873 4544 899999999
Q ss_pred EecCCCCceeEEEeeCCCCceeeEEEEecC--CChHHHHHHHHHHHHHHHHHHH
Q psy368 254 GFHPREPCYLGFISKHPNMQRFACHVFLAS--ESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 254 a~Dp~d~r~FaFIak~~~~~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq~~l 305 (320)
+.|++|.++||||++++. ++++||||.|. +.|++|+.+||+||++|||..|
T Consensus 75 ~~D~~d~~~FayIakd~~-~~~~CHvF~~~~~~~A~~I~~tigqAF~~ay~~~~ 127 (127)
T cd01274 75 CQDREDLNFFAYITKDTE-NRHYCHVFCVLTSGLAAEIITTLGQAFEVAYQLAL 127 (127)
T ss_pred ecCCCCceEEEEEeeCCC-CCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999998 89999999995 5699999999999999999754
No 7
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=1.1e-32 Score=233.10 Aligned_cols=120 Identities=19% Similarity=0.316 Sum_probs=110.8
Q ss_pred eeEEEEecCceEecCCCchHHHHHHHHHHHhcC--CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEE
Q psy368 177 ERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ--HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCG 254 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~--~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca 254 (320)
+.|.|+|||+++|.+++|++++++||++|+..+ .++.+|.|.|+.+||+|+|++|+. .+ +.+||++|||||
T Consensus 2 ~~F~VkyLG~~eV~~~~g~~vv~~ai~~L~~~~~~~~~~~v~l~Vs~~~l~l~d~~t~~-----~l--~~~~i~~Isf~~ 74 (123)
T cd01216 2 KVFAVRSLGWVEVAEEDGSEALNKAIDDLSSCSNWEDWKDLNMDLAPSTLSLIDPDNLT-----VL--HECRVRYLSFWG 74 (123)
T ss_pred cEEEEEeeeeEEECCCCCHHHHHHHHHHHHhccccccCeEEEEEEecCcEEEEcCCCCe-----EE--EEEEeeEEEEEE
Confidence 589999999999999999999999999999775 346899999999999999999973 44 449999999999
Q ss_pred ecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHH
Q psy368 255 FHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 255 ~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l 305 (320)
.|.++ |.||||++++. ++|.||||.|++.|.+|+.|||+||+++||++|
T Consensus 75 ~gk~~-r~FafI~~~~~-~~~~CHVF~c~~~a~~i~~tv~~ac~l~y~k~~ 123 (123)
T cd01216 75 VGRDV-RDFAFIMRTER-RRFMCHVFRCEPNAGALATTVEAACKLRYQKCL 123 (123)
T ss_pred cCCCC-cEEEEEEEcCC-CeEEEEEEEcCCCHHHHHHHHHHHHHHHhhccC
Confidence 99777 99999999987 899999999999999999999999999999985
No 8
>cd01270 DYC-1 DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 contains an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domains of both SHC and IRS-1, for example, bind to a NPXpY sequence. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.98 E-value=4.2e-32 Score=234.04 Aligned_cols=125 Identities=20% Similarity=0.379 Sum_probs=111.1
Q ss_pred ceeEEEEecCceEecCCCchHHHHHHHHHHHhc----CCCCcEEEEEEeCCceEEEeCCCCC-------ccceeeeeccc
Q psy368 176 RERFLLGYLGSVETSAHKGNAVICQAVHKIRQT----QHRPHSCILEVSDEGLRMVEKSRPG-------QHRKVRGLDYF 244 (320)
Q Consensus 176 ~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~----~~kp~~V~L~VS~~GIrVvD~~tk~-------~~~~~~~~~~f 244 (320)
|++|.|||||++||++++|++++.+||++|+.. +.|+++|.|.||.+||+|+|.+++. .+.+..+.+
T Consensus 2 GitF~vKYlG~~eV~~~~g~~~~~~A~rrir~~~ka~~~Kk~kV~l~VS~~Gv~v~d~k~~~~~~~~~~~~tk~li~~-- 79 (140)
T cd01270 2 GITFEAKYVGSEEVPRPNTRAEIVAAMRRIRYEFKAQNIKKRKVTIHVSVDGVKVVLKKKKRKKKNWTWDESKILVMN-- 79 (140)
T ss_pred ceEEEEEEcceEEecCCCCcCHHHHHHHHHHHHHHHhCCCceeEEEEEecCcEEEEecccccccccccccCcccEEEe--
Confidence 789999999999999999999999999999864 4678999999999999999987641 012334544
Q ss_pred cccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCC--ChHHHHHHHHHHHHHHHH
Q psy368 245 YSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASE--STRPVAEAVGRAFQRFYE 302 (320)
Q Consensus 245 ~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~--sA~~Ia~AIG~AFqvayq 302 (320)
+||++||||+.|+.|.++||||++++..+.++||||.|.. .|++|+.+|||||++||+
T Consensus 80 ~~i~rISf~a~D~~~~k~FayIakd~~~~~~~ChvF~~~k~~~A~~I~~TIGqAFev~~~ 139 (140)
T cd01270 80 HPIYRIFYVSHDSQDLKIFSYIARDGASNTFKCNVFKSHKKSQAMRIVRTVGQAFEVCHK 139 (140)
T ss_pred cCeeEEEEeecCCCCCcEEEEEecCCCCCceEEEEEEEcChhhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988999999999973 599999999999999986
No 9
>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.97 E-value=4.1e-31 Score=222.94 Aligned_cols=121 Identities=21% Similarity=0.356 Sum_probs=109.4
Q ss_pred eeEEEEecCceEecCCCchHHHHHHHHHHHhcC--CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEE
Q psy368 177 ERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ--HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCG 254 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~--~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca 254 (320)
+.|.++|||+++|+.++|++++++||++|+..+ .++.+|.+.|++.+|++.+.++.+ .++.+ ++|+.|||||
T Consensus 2 ~~f~~~yLG~~~V~~p~Gmdvln~AI~~l~~~~~~~~w~~V~vsvaps~v~v~~~~~~~----~~l~e--crVr~lSF~G 75 (124)
T cd01271 2 KVFRVQYLGMLPVDKPTGMEILNSAIDNLMSSSNKEDWLSVNVNVAPSTITVISEKNEE----EVLVE--CRVRYLSFLG 75 (124)
T ss_pred cEEEEEEeccEeecCCccHHHHHHHHHHHHhcCCcccCceEEEEeCCceEEEEccCccc----eeeee--eeEEEecccc
Confidence 579999999999999999999999999999885 468999999999999999988742 23444 7899999999
Q ss_pred ecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHH
Q psy368 255 FHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 255 ~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l 305 (320)
.| +|.+.||||++. ..++|.||||+|+++|.+|++|||+||+++||+||
T Consensus 76 vg-Kd~k~fafI~~~-~~~~f~ChVF~ce~~A~~ls~av~aAc~lrYQkcl 124 (124)
T cd01271 76 IG-KDVHTCAFIMDT-GNQRFECHVFWCEPNAGNVSKAVEAACKLRYQKCL 124 (124)
T ss_pred CC-CCccEEEEEEec-CCCcEEEEEEEecCChHHHHHHHHHHHHHHHhhcC
Confidence 97 699999999954 57899999999999999999999999999999986
No 10
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=99.97 E-value=2e-30 Score=216.57 Aligned_cols=127 Identities=31% Similarity=0.596 Sum_probs=116.6
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhc----CCCCcEEEEEEeCCceEEEeCCCCCccceeeeecccccccee
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQT----QHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNV 250 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~----~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~I 250 (320)
.+..|.|+|||+++|.+++|++++.+||++|+.. ..++++|.|.||.+||+|+|..++. .. +.|||++|
T Consensus 2 ~~~~f~v~YLGs~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~v~~~~~~~-----~l--~~~~l~~I 74 (134)
T smart00462 2 SGVSFRVKYLGSVEVPEARGLQVVQEAIRKLRAAQGSEKKEPQKVILSISSRGVKLIDEDTKA-----VL--HEHPLRRI 74 (134)
T ss_pred CceEEEEEEEEEEEecCCCCcHHHHHHHHHHHHhhhhccCCCCEEEEEEECCcEEEEECCCCe-----EE--EEccccce
Confidence 4679999999999999999999999999999984 3568999999999999999999872 33 34999999
Q ss_pred EEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHHhhc
Q psy368 251 MFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFIETA 308 (320)
Q Consensus 251 SFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l~~a 308 (320)
|||+.|++|+++||||++++..+.+.||||.|+..|++|+.+|++||+.+|++++...
T Consensus 75 sf~~~~~~~~~~F~fI~~~~~~~~~~CHvF~c~~~a~~i~~~i~~aF~~a~~~~~~~~ 132 (134)
T smart00462 75 SFCAVGPDDLDVFGYIARDPGSSRFACHVFRCEKAAEDIALAIGQAFQLAYELKLKAR 132 (134)
T ss_pred EEEecCCCCCcEEEEEeeCCCCCeEEEEEEEcCchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988889999999998899999999999999999999743
No 11
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=99.97 E-value=2.9e-30 Score=216.39 Aligned_cols=121 Identities=28% Similarity=0.687 Sum_probs=112.5
Q ss_pred EEEEecCceEecCC------CchHHHHHHHHHHHhc-----------CCCCcEEEEEEeCCceEEEeCCCCCccceeeee
Q psy368 179 FLLGYLGSVETSAH------KGNAVICQAVHKIRQT-----------QHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGL 241 (320)
Q Consensus 179 F~VKYLGSVeV~~~------kG~~Vv~eAV~kI~~~-----------~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~ 241 (320)
|.|||||+++|..+ .|.+++.+||++|+.. ..++++|.|.||.+||+|+|.+++. .+.
T Consensus 1 F~vkYLGs~~V~~~~~~~~~~g~~~v~~ai~~~~~~~~~~~~~~~~~~~~~~~V~l~vs~~gI~v~~~~t~~-----~l~ 75 (140)
T PF00640_consen 1 FEVKYLGSVEVSSSRRGDKSRGSDVVREAIQRLKAEKIAKSKKSKSNKKKPQKVTLNVSSDGIKVIDPDTGE-----VLM 75 (140)
T ss_dssp EEEEEEEEEEESSSSSTCHHHHHHHHHHHHHHHHHHCCCSHHHHHTTTSTSEEEEEEEETTEEEEEETTTTC-----EEE
T ss_pred CEEEEEEEEEECCccCCCcchhHHHHHHHHHHHHhhhhhhhhccccccccCeEEEEEEcCCeEEEecCcccc-----ccc
Confidence 89999999999999 6899999999999987 3567999999999999999999873 443
Q ss_pred ccccccceeEEEEe-cCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHHh
Q psy368 242 DYFYSLKNVMFCGF-HPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 242 ~~f~pL~~ISFca~-Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
. +||++||||+. |+++.++||||++++..+++.||||.|.+.|++|+.+||+||++|||++++
T Consensus 76 ~--~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~~A~~i~~~i~~aF~~a~~~~~~ 139 (140)
T PF00640_consen 76 S--HPIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCEDQAQEICQAIGQAFELAYQEFLR 139 (140)
T ss_dssp E--EEGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--CCccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 4 89999999999 999999999999999999999999999889999999999999999999987
No 12
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=99.97 E-value=3.6e-30 Score=221.68 Aligned_cols=127 Identities=13% Similarity=0.209 Sum_probs=111.5
Q ss_pred CCCCCceeEEEEecCceEecCCCchHHHHHHHHHHHhc----CCCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccc
Q psy368 171 TPKPKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQT----QHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYS 246 (320)
Q Consensus 171 ~~~~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~----~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~p 246 (320)
+..+++++|.|||||+++|++++|++++.+||++|+.. +.+.++|.|.||.+||+|+|.+|+. .+ |.||
T Consensus 7 ~f~g~gv~f~aKylG~~eV~e~RG~~v~~~Ai~klk~~~k~~~~kk~kV~L~IS~dGi~v~D~~T~~-----ll--~~~~ 79 (139)
T cd01215 7 RFQGNGVSYKAKLIGIQEVDKARGDAMCAEAMRKAKSIIKGAGAHKTRITLQINIDGIKVLDEKTGA-----VL--HHHP 79 (139)
T ss_pred eeeCCcEEEEEEecccEecccCCchHHHHHHHHHHHHHhhhhccccceEEEEEccCCEEEEcCCCCc-----EE--Eeec
Confidence 44589999999999999999999999999999999875 4678999999999999999999983 44 4499
Q ss_pred cceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHH
Q psy368 247 LKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 247 L~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l 305 (320)
|++||||+.|+.|.|.||||++++.. .+.|.+|...+.|++|+.+||+||+++|+.-.
T Consensus 80 i~rISfca~D~~d~r~FsyI~~~~~~-~H~f~~~k~~k~A~~i~lti~~aF~va~e~k~ 137 (139)
T cd01215 80 VHRISFIARDSTDARAFGYVYGEPGG-KHRFYGIKTAQAADQVVLAIRDLFQVVFELKK 137 (139)
T ss_pred eeeEEEEecCCCCCeEEEEEEEcCCC-cEEEEEEEhHHcchhhhhhHHHHHHHHHHHhh
Confidence 99999999999999999999999763 34455555568899999999999999998643
No 13
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.96 E-value=7.2e-29 Score=203.31 Aligned_cols=119 Identities=29% Similarity=0.607 Sum_probs=109.6
Q ss_pred ceeEEEEecCceEecCCCchHHHHHHHHHHHhcC----CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeE
Q psy368 176 RERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVM 251 (320)
Q Consensus 176 ~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~IS 251 (320)
+++|.|+|||+++|.+++|++++++||++|+... .++++|.|.||..||+|+|.+++. .+.. |||++||
T Consensus 1 ~~~f~v~ylG~~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~l~d~~~~~-----~l~~--~~l~~Is 73 (123)
T cd00934 1 GISFNVKYLGSVEVPEPRGSQVVRDAIRKLKAASKQGGEKGQKVILSVSSDGVKLIDPKTKE-----VLAS--HPIRRIS 73 (123)
T ss_pred CcEEEEEEEEEEEecCCCCchHHHHHHHHHHHhhhhcccCCCEEEEEEEcCcEEEEeCCCCc-----EEEe--eccceEE
Confidence 4689999999999999999999999999999885 458999999999999999999863 3433 8999999
Q ss_pred EEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHH
Q psy368 252 FCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFY 301 (320)
Q Consensus 252 Fca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvay 301 (320)
||+.|++++++||||++++..+.+.||||.|++.|+.|+.+|++||+++|
T Consensus 74 ~~~~~~~~~~~F~~i~~~~~~~~~~CHvF~c~~~a~~i~~~l~~af~~~~ 123 (123)
T cd00934 74 FCAADPDDLRIFAFIAREPGSSRFECHVFKCEKVAEPIALTLGQAFQVAY 123 (123)
T ss_pred EEECCCCCCcEEEEEEEcCCCCcEEEEEEEeCchHHHHHHHHHHHHHHhC
Confidence 99999999999999999998889999999998779999999999999886
No 14
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=99.95 E-value=7.9e-28 Score=210.14 Aligned_cols=123 Identities=21% Similarity=0.342 Sum_probs=104.9
Q ss_pred CCceeEEEEecCceEecCCC------chHHHHHHHHHHHhc-C--CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccc
Q psy368 174 PKRERFLLGYLGSVETSAHK------GNAVICQAVHKIRQT-Q--HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYF 244 (320)
Q Consensus 174 ~~~~~F~VKYLGSVeV~~~k------G~~Vv~eAV~kI~~~-~--~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f 244 (320)
.+|+.|.|+||||++|...+ .+.+.++||.+|++. + ...++|.|.||.+||+|.+.+|+. .+++
T Consensus 2 ~~Gv~f~a~YlG~t~~~~~~~~~~~tR~~~a~Eai~rik~~eG~~~~~t~V~L~IS~~gV~v~~~~tk~-----im~~-- 74 (156)
T cd01208 2 IEGVLFRARYLGSTQLLCEKTPSKNVRMXQAQEAVSRIKAPEGESQPSTEVDLFISTEKIMVLNTDLQE-----IXMD-- 74 (156)
T ss_pred cCceEEEEEeeceeeeeecCCCChhhhHHHHHHHHHHHhccccCCCCCcEEEEEEEeCeEEEEecCccc-----eecc--
Confidence 47899999999999977654 367788999999987 3 235899999999999999999983 6656
Q ss_pred cccceeEEEEecCCCCceeEEEeeCCC--------------------CceeeEEEEecCCChHHHHHHHHHHHHHHHHHH
Q psy368 245 YSLKNVMFCGFHPREPCYLGFISKHPN--------------------MQRFACHVFLASESTRPVAEAVGRAFQRFYEKF 304 (320)
Q Consensus 245 ~pL~~ISFca~Dp~d~r~FaFIak~~~--------------------~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~ 304 (320)
|+|++||||+ |. ..+|+|++|+.. ..+++||||.|++ |+.|+++|||||++||++|
T Consensus 75 h~L~~ISy~A-D~--~d~~v~mAkr~~~~~~~~~~~~~~~~~~~~~~~~k~~ChVFes~~-Aq~Ia~TIGQAF~lAY~~f 150 (156)
T cd01208 75 HALRTISYIA-DI--GDLVVLMARRRIPRSSSQENSEASHPSQDGKRTPKXICHVFESDE-AQFIAQSIGQAFQVAYQEF 150 (156)
T ss_pred CcccceEEEe-cC--CCeEEEEEeccccccccccccccCCcccccccccceeEEEEecCc-HHHHHHHHHHHHHHHHHHH
Confidence 9999999998 43 457999998432 2459999999998 9999999999999999999
Q ss_pred Hhh
Q psy368 305 IET 307 (320)
Q Consensus 305 l~~ 307 (320)
|+.
T Consensus 151 L~~ 153 (156)
T cd01208 151 LRA 153 (156)
T ss_pred HHh
Confidence 984
No 15
>cd01214 CG8312 CG8312 Phosphotyrosine-binding (PTB) domain. CG8312 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.94 E-value=5.3e-27 Score=200.60 Aligned_cols=120 Identities=24% Similarity=0.372 Sum_probs=108.9
Q ss_pred eEEEEecCceEecCCCchHHHHHHHHHHHhcC----CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEE
Q psy368 178 RFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFC 253 (320)
Q Consensus 178 ~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFc 253 (320)
+|.|+|||++.|..++|.+.+.+||++|+.+. ++.++|.|+|+++||+|++.... +.+ |+|++||||
T Consensus 3 ty~VkYLG~~~t~~~~Geg~t~~av~~I~~~~~~~~k~~~km~L~Vsp~GI~~~~~~~~-------~~~--~~i~RIsYC 73 (133)
T cd01214 3 TYTVLYLGNVLTIQARGEGCTEKALGKIWSKYEAGARQDTKMKLTVSASGLKAVTAQRG-------LTE--YWAHRITYC 73 (133)
T ss_pred cEEEEEcccccccccCCCccHHHHHHHHHHHHhhcccccceEEEEEcCCceEEEecccc-------ceE--EEEeeeeee
Confidence 89999999999999999999999999999982 46799999999999999987743 333 899999999
Q ss_pred EecCCCCceeEEEeeCCC---CceeeEEEEecC--CChHHHHHHHHHHHHHHHHHHHh
Q psy368 254 GFHPREPCYLGFISKHPN---MQRFACHVFLAS--ESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 254 a~Dp~d~r~FaFIak~~~---~~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
+.|++++++|+||+++.. ...+.||+|+|. ..|+.|+.+|++||..||++|-+
T Consensus 74 sad~~~p~VFa~I~r~~~~~~~~~l~CHAvlC~k~~~A~aial~L~q~f~~A~~~~kr 131 (133)
T cd01214 74 VAPARYPKVFCWIYRHEGKHLKVELRCHAVLCSKPEKAQAIALLLYQTLANALAEFKR 131 (133)
T ss_pred cCCcCCCcEEEEEEeecccccCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999874 358999999996 78999999999999999999975
No 16
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.94 E-value=5.1e-27 Score=205.94 Aligned_cols=124 Identities=18% Similarity=0.363 Sum_probs=108.6
Q ss_pred CCCceeEEEEecCceEecCC-------CchHHHHHHHHHHHhcC--C-------------------CCcEEEEEEeCCce
Q psy368 173 KPKRERFLLGYLGSVETSAH-------KGNAVICQAVHKIRQTQ--H-------------------RPHSCILEVSDEGL 224 (320)
Q Consensus 173 ~~~~~~F~VKYLGSVeV~~~-------kG~~Vv~eAV~kI~~~~--~-------------------kp~~V~L~VS~~GI 224 (320)
...|++|.|+||||+||..+ +++++++|||++++.+. . ...+|.|.||.+||
T Consensus 7 ~~~GV~y~vrYlG~~eV~~Smr~~~~~~Rtqv~rEaI~rV~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~V~l~IS~~~v 86 (160)
T cd01209 7 MGPGVSYLVRYMGCVEVLQSMRALDFETRTQVTRECISLVCEAVGGAKAATERNLNSILGRSNLKFAGMPITINVSSSSL 86 (160)
T ss_pred hcCCcEEEEEEeeEEeehhhcccCCcchhHHHHHHHHHHHHhccccccccccccccccccCccccccCceEEEEEEeeEE
Confidence 46899999999999999975 89999999999999772 1 13679999999999
Q ss_pred EEEeCCCCCccceeeeeccccccceeEEEEe-cCCCCceeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHHHHHHH
Q psy368 225 RMVEKSRPGQHRKVRGLDYFYSLKNVMFCGF-HPREPCYLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAFQRFYE 302 (320)
Q Consensus 225 rVvD~~tk~~~~~~~~~~~f~pL~~ISFca~-Dp~d~r~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AFqvayq 302 (320)
++.+.+++. .+.+ |+|++||||+. |++..++|+||+|++. +..+||||.|. ..|+.|+.+|||||+++|+
T Consensus 87 ~~~~~~t~~-----ii~~--H~l~~ISfaa~gd~d~~~~~ayIAKd~~-~~r~ChVf~~~~~lAq~Ii~TIGQAF~lay~ 158 (160)
T cd01209 87 NLMAQDCKQ-----IIAN--HHMQSISFASGGDPDTAEYVAYIAKNPD-NQRACHVLECPEGLAQDLISTIGQAFELRFK 158 (160)
T ss_pred EEeccCchh-----HHhc--CCCcceEEEeCCCCCcceeEEEEEcCCC-CCceeEEEEcCCchHHHHHHHHHHHHHHHhh
Confidence 999999873 5555 99999999986 7777799999999987 56699999985 5899999999999999999
Q ss_pred HH
Q psy368 303 KF 304 (320)
Q Consensus 303 ~~ 304 (320)
.|
T Consensus 159 ~~ 160 (160)
T cd01209 159 QY 160 (160)
T ss_pred cC
Confidence 75
No 17
>KOG3537|consensus
Probab=99.94 E-value=9e-27 Score=228.93 Aligned_cols=154 Identities=26% Similarity=0.429 Sum_probs=135.4
Q ss_pred ceecccCCcccccccCCcccccccccccC--CCCCCceeEEEEecCceEecCCCchHHHHHHHHHHHhcCCCCcEEEEEE
Q psy368 142 LRVNLRTGRQGIFPSAYAVDVEYEDLQTT--TPKPKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEV 219 (320)
Q Consensus 142 ~~~nlrtg~~GifP~~yv~~~~~~~~~~~--~~~~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~~kp~~V~L~V 219 (320)
++.++|-.+.-++|..-. ++.|+.. ..+-+.+.|.|||||+|||.+.+||+||.+|+++|++.++|+.+..|.|
T Consensus 4 lrrS~rR~~~~~Vpe~Sk----phQWQ~DE~aVRtgtCsF~VkYLG~VEV~ESRGM~vCE~AlK~Lkas~rk~VkavL~V 79 (543)
T KOG3537|consen 4 LRRSFRRRKKDYVPEASK----PHQWQADEEAVRTGTCSFPVKYLGHVEVFESRGMQVCEDALKVLKASRRKPVKAVLWV 79 (543)
T ss_pred hhhhHhhccCCCCCCCCC----ccccccchhhhccceeeeeeeeeeeEEEecccCcHHHHHHHHHHHHhccCcceeEEEE
Confidence 344555555555555544 5567643 3467899999999999999999999999999999999999999999999
Q ss_pred eCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEe-cCCChHHHHHHHHHHHH
Q psy368 220 SDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFL-ASESTRPVAEAVGRAFQ 298 (320)
Q Consensus 220 S~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~-c~~sA~~Ia~AIG~AFq 298 (320)
|.+||||||.+|| .+++| .-|.+|||||-|....|-|+||++|+.+.|+.||.|+ |+++++.++.|||.||.
T Consensus 80 S~DGLRVVD~~tk-----~LiVD--QTIEKVSFCAPDRn~Dr~FsYICRDGttRRW~CH~FlA~KdsGERLSHAVGCAFa 152 (543)
T KOG3537|consen 80 SGDGLRVVDDKTK-----GLIVD--QTIEKVSFCAPDRNHDRGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFA 152 (543)
T ss_pred ccCceEEeccCcc-----ceeee--eeeeeeeccccccccccceeEEeecCCcceeeeeeeeeecchhhHHHHHHHHHHH
Confidence 9999999999998 47788 8899999999999999999999999999999999997 58999999999999999
Q ss_pred HHHHHHHh
Q psy368 299 RFYEKFIE 306 (320)
Q Consensus 299 vayq~~l~ 306 (320)
.|++++.+
T Consensus 153 ~CLErKqR 160 (543)
T KOG3537|consen 153 ACLERKQR 160 (543)
T ss_pred HHHHHHhh
Confidence 99998876
No 18
>cd01213 tensin Tensin Phosphotyrosine-binding (PTB) domain. Tensin Phosphotyrosine-binding (PTB) domain. Tensin is a a focal adhesion protein, which contains a C-terminal SH2 domain followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.89 E-value=4.6e-23 Score=177.79 Aligned_cols=114 Identities=24% Similarity=0.479 Sum_probs=98.1
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhcC--CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEE
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ--HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMF 252 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~--~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISF 252 (320)
.+..|.|+||||++|..++|.+++++||+++++.. .++++|+|.||.+||+|+|..++ ....++||+++|||
T Consensus 4 qgaa~nv~yLgS~evesltg~~av~kAv~~~l~~~~~~~~t~vh~kVS~qGItLtDn~rk------~ffrrhypl~~Vs~ 77 (138)
T cd01213 4 QGAACNVLYLGSVDTESLTGNEAIKKAIAQCSGQAPDPQATEVHFKVSSQGITLTDNTRK------KFFRRHYKVDSVIF 77 (138)
T ss_pred cccccceeeeeeEeeccccCcHHHHHHHHHHHhcCCCCCceEEEEEEEcCCeeeeccccc------eeehhhCCcCeEEE
Confidence 56789999999999999999999999999999753 45789999999999999999876 34456799999999
Q ss_pred EEecCCC-----------CceeEEEeeCCCC-ceeeEEEEecC---CChHHHHHHHH
Q psy368 253 CGFHPRE-----------PCYLGFISKHPNM-QRFACHVFLAS---ESTRPVAEAVG 294 (320)
Q Consensus 253 ca~Dp~d-----------~r~FaFIak~~~~-~rf~CHVF~c~---~sA~~Ia~AIG 294 (320)
||.||+| +|+||||+|++.. .++.||||... .+|..|+.-|.
T Consensus 78 ca~dp~n~~~~~~~~~~~kriFgFVar~~~~~~~~~ChvF~e~~~~qpa~~iv~~~~ 134 (138)
T cd01213 78 CAIDPEERMWENEGAIAKARIFAFVARIPHSSTDNACHVFAELEPEQPASAIVNFAN 134 (138)
T ss_pred EeeCCccccccccccccccEEEEEEEecCCCCCCeeEEEeccCCCCCCHHHHHHHHH
Confidence 9999997 6999999999876 78999999874 55666655554
No 19
>PF14719 PID_2: Phosphotyrosine interaction domain (PTB/PID)
Probab=99.89 E-value=1.4e-22 Score=181.80 Aligned_cols=120 Identities=26% Similarity=0.473 Sum_probs=108.0
Q ss_pred eEEEEecCceEecCCCchHHHHHHHHHHHhcC---CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEE
Q psy368 178 RFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ---HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCG 254 (320)
Q Consensus 178 ~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~---~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca 254 (320)
+|.|+|||++.+...+|.+.+.+||..|++.. ++..++.|+|+..||+|.+.+.+ + ++|+|++|+||+
T Consensus 1 ty~V~YLG~~~t~~~~Gegct~kpV~~lw~~~~~~k~~~~m~L~V~~~Gik~~~~~~~-------~--~~y~i~RItYC~ 71 (182)
T PF14719_consen 1 TYKVRYLGNVLTRGAKGEGCTEKPVSKLWRRYKQGKPDKKMKLTVSPSGIKMETKDKG-------L--TEYWIHRITYCT 71 (182)
T ss_pred CeEEEEecceecccccccchHHHHHHHHHHHhccCCCCceeEEEEcCCceEEEECCCC-------c--eEEEeeeEEEec
Confidence 59999999999999999999999999999983 33689999999999999988743 2 458999999999
Q ss_pred ecCCCCceeEEEeeCCCC---ceeeEEEEecC--CChHHHHHHHHHHHHHHHHHHHh
Q psy368 255 FHPREPCYLGFISKHPNM---QRFACHVFLAS--ESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 255 ~Dp~d~r~FaFIak~~~~---~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
.|+.++|+|++|.++... ..+.||+|.|+ ..|+.|+.++.+||+.||+.|.+
T Consensus 72 ad~~~PrVFawIyrhe~~~~~~~L~CHAvlC~k~~~Akama~~L~~af~~Af~~~kr 128 (182)
T PF14719_consen 72 ADPQHPRVFAWIYRHEGKKLKVELRCHAVLCSKEEKAKAMARALYQAFRSAFQEFKR 128 (182)
T ss_pred CCCCCCceEEEEEEcccCCCcccEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998643 57999999996 67999999999999999999976
No 20
>KOG3536|consensus
Probab=99.87 E-value=1.3e-23 Score=199.42 Aligned_cols=127 Identities=20% Similarity=0.357 Sum_probs=118.0
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhcC-------CCCcEEEEEEeCCceEEEeCCCCCccceeeeecccccc
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ-------HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSL 247 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~-------~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL 247 (320)
+.+.|.+||||+++|..++|.+|+.+|+++|+..+ .|.++|.|.||.+||.|.|..|+. .+ |.++|
T Consensus 45 g~v~y~~kflg~~ev~qpkG~~vv~~a~r~~rr~~~~kkseg~k~~kvE~~Isi~gviI~~~~T~~-----v~--~~~~l 117 (321)
T KOG3536|consen 45 GHVPYSAKFLGMTEVEQPKGTDVVREAIRAIRRTNPFKKSEGEKLQKVELSISIQGVIIRDLGTMA-----VK--HNFPL 117 (321)
T ss_pred ccHHHHHHhcccccccCCCccHHHHHHHHhhhhcccccccccccccceeeeeccceeEEeeccccc-----ce--ecCCh
Confidence 45899999999999999999999999999999874 468999999999999999999983 44 44999
Q ss_pred ceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHHhhc
Q psy368 248 KNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFIETA 308 (320)
Q Consensus 248 ~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l~~a 308 (320)
++||||+.|..++|+|+||+|...++.+.||+|.|.+.|++|+++||+||.++|.+|++..
T Consensus 118 ~rIs~caddk~~kR~fsfIar~~es~~hlc~~f~s~Kla~~iTltigqaFdLay~~~~~s~ 178 (321)
T KOG3536|consen 118 YRISYCADDKLAKRAFSFIARMTESQSHLCVAFDSLKLADDITLTIGQAFDLAYVKFLDSH 178 (321)
T ss_pred hhhhHhHhHHHHHHHHHHHHHhcccCCceEEEeehhhhcchHHHHHHhhcchhhHHHHhhc
Confidence 9999999999999999999999988899999999999999999999999999999999854
No 21
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.76 E-value=5e-18 Score=143.43 Aligned_cols=117 Identities=17% Similarity=0.330 Sum_probs=101.3
Q ss_pred eeEEEEecCceEecCCCc-hHHHHHHHHHHHhcC----CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeE
Q psy368 177 ERFLLGYLGSVETSAHKG-NAVICQAVHKIRQTQ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVM 251 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~kG-~~Vv~eAV~kI~~~~----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~IS 251 (320)
..|.|.|-|-|-|...+- ..++.+||+|.+-.. ..-+++.|.|+..||.++|++||. .+.. +++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~li~e~I~K~~~~~~~kr~~nrtm~~~I~~~~v~lispdtK~-----vl~~--k~f~dIS 74 (129)
T cd01269 2 QKFEVLYCGRVTVTHKKAPSSLIDDCIEKFSLHEQQRLKDNRTMLFQVGRFEINLISPDTKS-----VVLE--KNFKDIS 74 (129)
T ss_pred CeeEEEEEeeEEEeeccCChHHHHHHHHHhhhhhhhhccCCcEEEEEEeccceEEEcCCcce-----EEEe--cCccccc
Confidence 369999999999988775 567899999998773 235889999999999999999983 4433 8999999
Q ss_pred EEEecCCCCceeEEEeeCCCCc---eeeEEEEecC--CChHHHHHHHHHHHHHH
Q psy368 252 FCGFHPREPCYLGFISKHPNMQ---RFACHVFLAS--ESTRPVAEAVGRAFQRF 300 (320)
Q Consensus 252 Fca~Dp~d~r~FaFIak~~~~~---rf~CHVF~c~--~sA~~Ia~AIG~AFqva 300 (320)
+|+.+.++.+.||||+++...+ .|+||||.|. +.|.+|..+|+|||.+|
T Consensus 75 sC~qg~~~~dhFgFIcrEs~~~~~~~f~CyVFqc~Se~la~eI~lti~QAF~~a 128 (129)
T cd01269 75 SCSQGIKHVDHFGFICRESPEPGLSQYICYVFQCADESLVDEVMLTLKQAFSTA 128 (129)
T ss_pred hhhcCCCCcceEEEEeccCCCCCcceEEEEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999997754 4999999984 77899999999999876
No 22
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.74 E-value=1.5e-17 Score=140.46 Aligned_cols=111 Identities=21% Similarity=0.307 Sum_probs=91.3
Q ss_pred EEEecCceEecCCCchHHHHHHHHHHHhcCCC-CcEEEEEEe--CCc-eEEEeCCCCCccceeeeeccccccceeEEEEe
Q psy368 180 LLGYLGSVETSAHKGNAVICQAVHKIRQTQHR-PHSCILEVS--DEG-LRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGF 255 (320)
Q Consensus 180 ~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~~k-p~~V~L~VS--~~G-IrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~ 255 (320)
.|+|||+..|..+++...+.++|.-+++..++ +-+|.|.|. .+| |+|+|..++. .+.. |||++|+||+-
T Consensus 5 ~vtYLGct~V~aP~sE~e~~r~m~~l~~~s~~~~i~Vtl~Vp~~seG~V~l~D~~t~~-----~ias--~~I~rI~fC~r 77 (125)
T cd01211 5 NVTYLGCSQLVNPDSENEMKRLMKVLDEQSGAQTINVTLVVPNNIEGTVKLIDAQSNK-----VIAS--FSIVNIRFCIR 77 (125)
T ss_pred CcEEeeeEEecCCCCHHHHHHHHHHHHhhcccCCeEEEEEecCCCCceEEEEcCCCCc-----EEEE--EEEEEEEEEEe
Confidence 47899999999999999999999888766555 788888887 677 9999999973 4544 99999999998
Q ss_pred ---cCCCCceeEEEeeCCCCceeeEEEEecC--CChHHHHHHHHHHH
Q psy368 256 ---HPREPCYLGFISKHPNMQRFACHVFLAS--ESTRPVAEAVGRAF 297 (320)
Q Consensus 256 ---Dp~d~r~FaFIak~~~~~rf~CHVF~c~--~sA~~Ia~AIG~AF 297 (320)
|.....+|||...++....|.||||.|+ +.+..|..+.+.||
T Consensus 78 G~~~t~e~~cFAft~s~~~se~~qcHVFrC~~~eav~kil~sF~~AF 124 (125)
T cd01211 78 GESSTSENNCFAFTFTHKISILFQCHVFRCSIAEAVAKALYSFSYAF 124 (125)
T ss_pred cCCCCcccccEEEEeecCCceEEEEEEEecCCHHHHHHHHHHHHHhh
Confidence 5556789999999999899999999997 43455555555555
No 23
>KOG3605|consensus
Probab=99.72 E-value=5e-18 Score=173.70 Aligned_cols=132 Identities=20% Similarity=0.253 Sum_probs=104.1
Q ss_pred CCCceeEEEEecCceEecCCCc------hHHHHHHHHHHHhcC--------------CCCcEEEEEEeCCceEEEeCCCC
Q psy368 173 KPKRERFLLGYLGSVETSAHKG------NAVICQAVHKIRQTQ--------------HRPHSCILEVSDEGLRMVEKSRP 232 (320)
Q Consensus 173 ~~~~~~F~VKYLGSVeV~~~kG------~~Vv~eAV~kI~~~~--------------~kp~~V~L~VS~~GIrVvD~~tk 232 (320)
..+|+.|.++||||+.....++ +-..++||.+++..+ ...+.|.|.||.++|+|++..++
T Consensus 446 LidGvif~A~ylgsTqllse~~psk~~rm~Qaqeavsrvk~~~~~~~s~~~Apegesqp~tevdlfist~ri~VLnadlq 525 (829)
T KOG3605|consen 446 LIDGVIFGARYLGSTQLLSERNPSKAVRMMQAQEAVSRVKGGQKNAKSGKKAPEGESQPMTEVDLFISTQRIKVLNADLQ 525 (829)
T ss_pred hhhhheeecccccccccccCCCCcHHHHHHHHHHHHhhhccccccccccccCCCCCCCcceeeeeeeecceeEEEechhH
Confidence 4789999999999999988764 344589999999431 13599999999999999999987
Q ss_pred CccceeeeeccccccceeEEEEecCCC---------CceeEEEee--------CCCCceeeEEEEecCCChHHHHHHHHH
Q psy368 233 GQHRKVRGLDYFYSLKNVMFCGFHPRE---------PCYLGFISK--------HPNMQRFACHVFLASESTRPVAEAVGR 295 (320)
Q Consensus 233 ~~~~~~~~~~~f~pL~~ISFca~Dp~d---------~r~FaFIak--------~~~~~rf~CHVF~c~~sA~~Ia~AIG~ 295 (320)
+ .|++ |+|+.|||++....- .|--.-+.- ..++.+|.||||.+++ |+-|+++|||
T Consensus 526 e-----~mmd--haLrtisyiadIg~lvvlMarrr~~~~s~~~~~~~~~~~~~~~rtpKMICHVFESde-AQfIAQSIGQ 597 (829)
T KOG3605|consen 526 E-----TMMD--HALRTISYIADIGNVVVLMARRRDVRSSSEDCSEDIDPAQKGNRTPKMICHVFESDE-AQFIAQSIGQ 597 (829)
T ss_pred H-----hhhh--hhhhhhHHHhhhhHHHHHHHHhhcccccccccCCCCCcccccCCCcceEEEEeccch-HHHHHHHHHH
Confidence 3 6888 999999999854211 111111111 1135799999999988 9999999999
Q ss_pred HHHHHHHHHHhhcCCCcc
Q psy368 296 AFQRFYEKFIETAFPIED 313 (320)
Q Consensus 296 AFqvayq~~l~~a~p~ed 313 (320)
||++||++||+ |..||+
T Consensus 598 AFqVAY~EFLr-ANGI~~ 614 (829)
T KOG3605|consen 598 AFQVAYMEFLR-ANGIEP 614 (829)
T ss_pred HHHHHHHHHHH-HcCCCc
Confidence 99999999999 788887
No 24
>KOG1930|consensus
Probab=99.64 E-value=7.8e-16 Score=151.55 Aligned_cols=115 Identities=25% Similarity=0.522 Sum_probs=97.0
Q ss_pred CCceeEEEEecCceEecCCCchHHHHHHHHHHHhcC--CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeE
Q psy368 174 PKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ--HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVM 251 (320)
Q Consensus 174 ~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~--~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~IS 251 (320)
..+..++|.|||||+|+..+|+++|++|....+... ..++.|+++||.+||+++|..+|. ++.+|||+..|+
T Consensus 342 kqGAACnVlyl~SVd~ESLTG~~av~kAt~~~~~~~p~p~~tvVHFKVSsQGITLTDNqRK~------FFRRHypv~sv~ 415 (483)
T KOG1930|consen 342 KQGAACNVLYLGSVDVESLTGNEAVQKATSSQRAINPTPRATVVHFKVSSQGITLTDNQRKV------FFRRHYPVNSVI 415 (483)
T ss_pred hhCccceEEEEeeeeccccccHHHHHHHHHHHhhcCCCCCceEEEEEEeccceeeeccchhh------heecccccceeE
Confidence 568999999999999999999999999988887775 346999999999999999999873 566789999999
Q ss_pred EEEecCCC-----------CceeEEEeeCCC-CceeeEEEEecCCChHHHHHHHH
Q psy368 252 FCGFHPRE-----------PCYLGFISKHPN-MQRFACHVFLASESTRPVAEAVG 294 (320)
Q Consensus 252 Fca~Dp~d-----------~r~FaFIak~~~-~~rf~CHVF~c~~sA~~Ia~AIG 294 (320)
||+.||.+ .++||||+|.++ ...+.||+|..-+.-|+.+..|+
T Consensus 416 Fc~mDPq~R~w~~~g~~~~s~iFgFVAr~~gS~teN~CHlFAEldp~QPasAIVn 470 (483)
T KOG1930|consen 416 FCGMDPQERRWTNTGCGAQSKIFGFVARKPGSSTENVCHLFAELDPEQPASAIVN 470 (483)
T ss_pred EecCChHHhccccCCCCCcceEEEEEeccCCCCcccceeeeeccCccCchHHHHH
Confidence 99999876 589999999974 56899999988544444444444
No 25
>KOG3535|consensus
Probab=99.63 E-value=1.7e-15 Score=149.27 Aligned_cols=128 Identities=11% Similarity=0.201 Sum_probs=110.9
Q ss_pred cCCCCCCceeEEEEecCceEecCCCchHHHHHHHHHHHhc-------CCCCcEEEEEEeCCceEEEeCCCCCccceeeee
Q psy368 169 TTTPKPKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQT-------QHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGL 241 (320)
Q Consensus 169 ~~~~~~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~-------~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~ 241 (320)
+.+.+++|+.|.+|.+|--+|..++|..+|+++|.+++.. +.+.+++.|.||..||||+|.+|.. +
T Consensus 41 ~~RFkg~GV~YKaKLIGiddV~~ARGDkmcqdsMmklKGvva~~rs~G~HKqrI~l~Is~~GIKI~DEKtGa-------v 113 (557)
T KOG3535|consen 41 PFRFKGNGVSYKAKLIGIDDVDKARGDKMCQDSMMKLKGVVAIIRSAGAHKQRITLQISIDGIKILDEKTGA-------V 113 (557)
T ss_pred hhhhcCCCeeeeeeeccccccchhhhhhHHHHHHHHhhhhhhhhhccccccceEEEEEeecceEEeeccccc-------e
Confidence 4566799999999999999999999999999999999943 2468999999999999999999972 3
Q ss_pred ccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHHHHHHHH
Q psy368 242 DYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQRFYEKFI 305 (320)
Q Consensus 242 ~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqvayq~~l 305 (320)
.|+||+.+|||+|-|..|.|.||||+..+.. +.-+.......|+++...|..-||+.|+...
T Consensus 114 ~H~hpV~~ISfIArD~tD~RAFGyVcG~eG~--hkF~aIKTaQaAep~VldlrDlFQvIye~Kk 175 (557)
T KOG3535|consen 114 LHNHPVSRISFIARDSTDARAFGYVCGEEGK--HKFYAIKTAQAAEPAVLDLRDLFQVIYEMKK 175 (557)
T ss_pred eccCccceeeeeecccccccceeeeecCCCc--eeEEEEecccccchhhHhHHHHHHHHHHHHH
Confidence 4779999999999999999999999998754 3334555668899999999999999997544
No 26
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.61 E-value=1.1e-14 Score=124.25 Aligned_cols=116 Identities=13% Similarity=0.270 Sum_probs=101.7
Q ss_pred eeEEEEecCceEecCC-----CchHHHHHHHHHHHhcCC----------CCcEEEEEEeCCceEEEeCCCCCccceeeee
Q psy368 177 ERFLLGYLGSVETSAH-----KGNAVICQAVHKIRQTQH----------RPHSCILEVSDEGLRMVEKSRPGQHRKVRGL 241 (320)
Q Consensus 177 ~~F~VKYLGSVeV~~~-----kG~~Vv~eAV~kI~~~~~----------kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~ 241 (320)
+.|.|+-||+||+.+. +...+++.+|+.|-..+. .-+...|.+...-|+++|+.++. .+
T Consensus 2 ~~faVrslGWve~~Eedl~p~~sS~avn~cI~~Ls~~~~d~~d~~g~wgeGk~~~m~L~~g~lkLiDP~~~s-----~L- 75 (138)
T cd01272 2 IRFAVRSLGWVEIAEEDLTPEKSSKAVNKCIVDLSLGRNDMLDVVGRWGDGKDLFMDLDEGALKLIDPENLT-----VL- 75 (138)
T ss_pred cceeeeccceEEcchhhcCCcccHHHHHHHHHHHhccccccccCcCcccCcceeEEEecCCceEeeCCCCCc-----eE-
Confidence 5799999999999873 678889999999876531 13889999999999999999983 33
Q ss_pred ccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHHHHHHHHHHHH
Q psy368 242 DYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPVAEAVGRAFQR 299 (320)
Q Consensus 242 ~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~Ia~AIG~AFqv 299 (320)
|.|||.+|-||+...++.+-|||++++..+..|.||||.|+..|+.|+.++..-++.
T Consensus 76 -hSqPI~~IRvwGvGrdngrdFA~vard~~T~~~~CHVFRC~~pak~ia~~l~~~c~~ 132 (138)
T cd01272 76 -HSQPIHTIRVWGVGRDNGRDFAYVIRDERTRGSNCHVFRCDTRAKDIATELRRICRH 132 (138)
T ss_pred -EeeeeeEEEEEEecCCCCcceEEEeecCCCceeEEEEEEcCCCCccchHHHHHHHHh
Confidence 559999999999999999999999999999999999999999999999999987754
No 27
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 (IPR000980 from INTERPRO) domain and a region similar to the tumour suppressor PTEN []. The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif []. ; GO: 0005515 protein binding; PDB: 3HQC_A 2DKQ_A 2LOZ_A 2CY5_A 2CY4_A 2GJY_A 1WVH_A.
Probab=99.60 E-value=1.8e-14 Score=123.34 Aligned_cols=114 Identities=22% Similarity=0.422 Sum_probs=97.2
Q ss_pred eEEEEecCceEecCCCchHHHHHHHHHHHhcC----CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEE
Q psy368 178 RFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFC 253 (320)
Q Consensus 178 ~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFc 253 (320)
.|.|.||+++.+....|...+.+||++++... .-++.|+|.|+.+||+|+|..++. .+ .+||+..|+||
T Consensus 1 ~~~V~hL~T~~~e~~~g~~~v~d~i~~l~~l~~~~~~w~q~~~lkV~~~~v~L~D~~~k~------~l-e~yPl~~I~~c 73 (131)
T PF08416_consen 1 AYNVEHLATFDVESLTGPQAVEDAIRRLKLLEAKGRIWPQEMHLKVSDQGVTLTDIETKE------FL-EHYPLSSIQFC 73 (131)
T ss_dssp EEEEEEEEEEEECTTSCCCHHHHHHHHHHHHHCSS-SS-EEEEEEEETTEEEEEESSTSS------EC-EEEECCCEEEE
T ss_pred CcEEEEEEEEEcCCCcchhhHHHHHHHHHhhccCCCcccEEEEEEEeCCeEEEEECcccc------hh-hhCCHhHeeec
Confidence 48999999999999999999999999887662 236999999999999999999984 22 45999999999
Q ss_pred EecCCCCc---eeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHHH
Q psy368 254 GFHPREPC---YLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAFQ 298 (320)
Q Consensus 254 a~Dp~d~r---~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AFq 298 (320)
+.||.+.+ +|+|+++.+....-.||+|.|+ -.|..++.+|-.|..
T Consensus 74 ~~~~~~~~~~~il~fV~r~~~~~~~~~H~Fqc~ev~a~~~~~~I~~~v~ 122 (131)
T PF08416_consen 74 GADPDSRRYNSILGFVVRKPGSSKPNVHLFQCEEVDAEQPAEDIVSAVS 122 (131)
T ss_dssp EEETTTTEECBEEEEEEEETTCCCEEEEEEEETCTCTTSHHHHHHHHHH
T ss_pred cccCCCCccceEEEEEEecCCCCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99988754 9999999987777888999994 568888888877764
No 28
>KOG3697|consensus
Probab=99.34 E-value=4e-13 Score=127.50 Aligned_cols=137 Identities=20% Similarity=0.329 Sum_probs=105.8
Q ss_pred CCCceeEEEEecCceEecCCC-------chHHHHHHHHHHHhcC--------CC------------------CcEEEEEE
Q psy368 173 KPKRERFLLGYLGSVETSAHK-------GNAVICQAVHKIRQTQ--------HR------------------PHSCILEV 219 (320)
Q Consensus 173 ~~~~~~F~VKYLGSVeV~~~k-------G~~Vv~eAV~kI~~~~--------~k------------------p~~V~L~V 219 (320)
..-|+.|.|+|||||||.... ..++..+||.++..+- ++ ...++|.|
T Consensus 13 ~~~GVs~~v~YlGcVeV~~Sm~~ldf~trtq~~re~is~vceav~g~kgat~rR~~n~~~s~i~gr~~lq~a~m~I~itv 92 (345)
T KOG3697|consen 13 RGPGVSYSVTYLGCVEVLESMNVLDFNTRTQMTREAISRVCEAVPGAKGATKRRPINPVLSSILGRSNLQFAGMSITLTI 92 (345)
T ss_pred ccCCceEEEEEeeeehHHhhhhhhhhccHHHHHHHHHHHHHHhccccccccccCCCcccchhhcCccccccCCcceEEEe
Confidence 467999999999999999853 4577888888877651 11 26677777
Q ss_pred eCCceEEEeCCCCCccceeeeeccccccceeEEE-EecCCCCceeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHH
Q psy368 220 SDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFC-GFHPREPCYLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAF 297 (320)
Q Consensus 220 S~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFc-a~Dp~d~r~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AF 297 (320)
|...|-+.....| +...+ |.+..|||. |.|++-..+.+||+|++.. +=+||||.|. ..|+.|..+||+||
T Consensus 93 st~sL~l~~~d~k-----qiian--h~m~~isfasGgD~Dt~~~~ayvaKD~~~-rRac~Vlec~~g~a~DVI~Tigqaf 164 (345)
T KOG3697|consen 93 STSSLNLMTADCK-----QIIAN--HHMQSISFASGGDPDTADYVAYVAKDPVN-RRACHILECCDGLAQDVIGTIGQAF 164 (345)
T ss_pred ehhhhhhhhhHhh-----hhhhh--ccccccccccCCCchhhhHHhhhccCccc-cceeEEEeccCchhHHHHHhhhhhh
Confidence 7777777766665 34555 669999997 6899889999999999985 4599999984 88999999999999
Q ss_pred HHHHHHHHhhcCCCccccccc
Q psy368 298 QRFYEKFIETAFPIEDIYIEE 318 (320)
Q Consensus 298 qvayq~~l~~a~p~edi~~e~ 318 (320)
+..||-.=..+-+-++ .+||
T Consensus 165 ~lrfk~~~rm~~~~~~-~~ee 184 (345)
T KOG3697|consen 165 ELRFKLHDRMQSLDEP-WTEE 184 (345)
T ss_pred eeeccccccccccccc-chhh
Confidence 9999854445555555 4443
No 29
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.32 E-value=7.9e-13 Score=94.86 Aligned_cols=49 Identities=37% Similarity=0.668 Sum_probs=44.1
Q ss_pred EeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 86 SLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 86 ~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
|||+|.|+..|||.|.+||+|.|....+++||.| .| +|+.|+||++|++
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g------------------------~~--~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYG------------------------RN--TGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEE------------------------EE--TTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEE------------------------EE--CCEEEEECHHhCC
Confidence 7899999999999999999999999999999999 54 8999999999984
No 30
>KOG4225|consensus
Probab=99.25 E-value=2.6e-12 Score=127.47 Aligned_cols=54 Identities=39% Similarity=0.647 Sum_probs=52.6
Q ss_pred eEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 84 HRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 84 ~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
+||||.|.||++|||+|..||||.|.++++|+|..| ++.|||+-|+||.|||++
T Consensus 435 yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvG------------------------ts~rtg~fGtFPgnyV~~ 488 (489)
T KOG4225|consen 435 YRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVG------------------------TSRRTGKFGTFPGNYVKR 488 (489)
T ss_pred ceeccccCCCCchhheeccCCEEeeeecccCcceec------------------------cceecccccccCcccccc
Confidence 899999999999999999999999999999999999 899999999999999965
No 31
>KOG4225|consensus
Probab=99.15 E-value=1.9e-11 Score=121.48 Aligned_cols=67 Identities=30% Similarity=0.549 Sum_probs=59.1
Q ss_pred CCCccccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcc
Q psy368 72 LPPSKLELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQ 151 (320)
Q Consensus 72 ~p~~~~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~ 151 (320)
.|.++.+.....+||||+|.|+...||.|++||||||+++.|++|++|. ..|+.
T Consensus 221 ~~r~~~~~~~~~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGE--------------------------hhGr~ 274 (489)
T KOG4225|consen 221 PPRRKTEKPKRAARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGE--------------------------HHGRV 274 (489)
T ss_pred CCCCCCccccchhhheeccccCCccccccCCCCEEEEEeeccCceeeee--------------------------eccee
Confidence 4445555556679999999999999999999999999999999999993 35999
Q ss_pred cccccCCcccccc
Q psy368 152 GIFPSAYAVDVEY 164 (320)
Q Consensus 152 GifP~~yv~~~~~ 164 (320)
||||.+|++-++.
T Consensus 275 GifP~sYvE~~~~ 287 (489)
T KOG4225|consen 275 GIFPASYVEILTP 287 (489)
T ss_pred cceechheeecCc
Confidence 9999999998887
No 32
>KOG1118|consensus
Probab=99.13 E-value=3.7e-11 Score=115.20 Aligned_cols=60 Identities=28% Similarity=0.579 Sum_probs=52.8
Q ss_pred ccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCccccccc
Q psy368 77 LELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPS 156 (320)
Q Consensus 77 ~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~ 156 (320)
..+-...+|+||+|.|+++.||-|..||+|.|.+.++.+||+|. . .|++|+||.
T Consensus 302 s~~~~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~-----------------------~---~g~sG~FPv 355 (366)
T KOG1118|consen 302 SQMDQPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGE-----------------------K---HGESGMFPV 355 (366)
T ss_pred CcccchhheeeeccCCCCCCccCcccCceeeehhhcCcchhhhe-----------------------e---cCccCcccc
Confidence 33445679999999999999999999999999999999999993 2 499999999
Q ss_pred CCcccc
Q psy368 157 AYAVDV 162 (320)
Q Consensus 157 ~yv~~~ 162 (320)
||++.+
T Consensus 356 nYv~vl 361 (366)
T KOG1118|consen 356 NYVEVL 361 (366)
T ss_pred ceeEEe
Confidence 999644
No 33
>KOG4348|consensus
Probab=99.08 E-value=4.8e-11 Score=118.76 Aligned_cols=73 Identities=27% Similarity=0.479 Sum_probs=61.6
Q ss_pred CCCCCCCccccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceeccc
Q psy368 68 SPVTLPPSKLELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLR 147 (320)
Q Consensus 68 ~~~~~p~~~~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlr 147 (320)
.++.+...+.+...+.|+++|.|.||++|||+|..||+|.|..+.+++||+|+ .|
T Consensus 87 q~v~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~-----------------------Ln-- 141 (627)
T KOG4348|consen 87 QQVERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGK-----------------------LN-- 141 (627)
T ss_pred CcccccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhce-----------------------ec--
Confidence 33334444555667889999999999999999999999999999999999995 44
Q ss_pred CCcccccccCCcccccccc
Q psy368 148 TGRQGIFPSAYAVDVEYED 166 (320)
Q Consensus 148 tg~~GifP~~yv~~~~~~~ 166 (320)
|+.|+||+||+...+.+.
T Consensus 142 -gk~GmFPsNFVkel~~~s 159 (627)
T KOG4348|consen 142 -GKVGMFPSNFVKELPTPS 159 (627)
T ss_pred -CcccccchhhceecCCCC
Confidence 999999999998887643
No 34
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.04 E-value=3.4e-09 Score=92.37 Aligned_cols=118 Identities=17% Similarity=0.324 Sum_probs=91.2
Q ss_pred eeEEEEecCceEec-CCCchHHHHHHHHHHHhc----CCCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeE
Q psy368 177 ERFLLGYLGSVETS-AHKGNAVICQAVHKIRQT----QHRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVM 251 (320)
Q Consensus 177 ~~F~VKYLGSVeV~-~~kG~~Vv~eAV~kI~~~----~~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~IS 251 (320)
.+|.|.||||++.. ...|-+-+++.++.+.-. ++|...-.|.|+..||+|.-..... ....+++|+++|-
T Consensus 2 c~f~V~yLGS~pl~dk~~sLqgiQEPLr~LY~se~~~~kKl~~gsL~Ics~GLrvk~s~~~~-----~~E~~~fP~~~i~ 76 (158)
T cd01217 2 CRCRVLYLGSLVPKDKKDGLQGIQEPLRQLYPSEVTPKKKGIDSWLSVWSNGLLLEISALAE-----KNETLFFPIHNLH 76 (158)
T ss_pred ceEEEEEEcCcCCccccchhhhhhhHHHHhhhhccccccccccceEEEecCceEEEeccccc-----cccccccccceee
Confidence 47999999999854 456888899999999833 3567888999999999997765542 1123679999999
Q ss_pred EEEe------c-----------------------CCCCceeEEEeeCCCC-ceeeEEEEecCCChHHHHHHHHHHHHHHH
Q psy368 252 FCGF------H-----------------------PREPCYLGFISKHPNM-QRFACHVFLASESTRPVAEAVGRAFQRFY 301 (320)
Q Consensus 252 Fca~------D-----------------------p~d~r~FaFIak~~~~-~rf~CHVF~c~~sA~~Ia~AIG~AFqvay 301 (320)
||+. + +.++-+||.|.|.... .-..||.|.|+.. | -.-+|
T Consensus 77 ~~aAVkfVi~~~~~~~~~~~aFLPL~t~~~ni~~~~H~PiFA~vmR~t~~~kvLECHgFiCk~~---i-------AA~~~ 146 (158)
T cd01217 77 YCAAVRFVISDGFKVDDGGAAFLPLDSPFANIPIHVHPPIFAAIMRRTTGPKVLECHGFICKST---I-------AANAL 146 (158)
T ss_pred EeeEEEEEeccCcccCCCcccccccCCChhhCCCcCCCCeEEEEEecCCCCceEEeeEEEeCCH---H-------HHHHH
Confidence 9986 4 4678999999998654 4689999999863 1 23567
Q ss_pred HHHHhhcC
Q psy368 302 EKFIETAF 309 (320)
Q Consensus 302 q~~l~~a~ 309 (320)
|.++.+++
T Consensus 147 ~~~m~H~~ 154 (158)
T cd01217 147 VRCMAHAY 154 (158)
T ss_pred HHHHHHhc
Confidence 88887765
No 35
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.02 E-value=1.8e-10 Score=81.60 Aligned_cols=48 Identities=35% Similarity=0.526 Sum_probs=44.6
Q ss_pred EEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCccccccc
Q psy368 85 RSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPS 156 (320)
Q Consensus 85 r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~ 156 (320)
+|||+|.++..+||.|++||.|.|.+..+++||.| .++++|+.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~------------------------~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKV------------------------RNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEE------------------------EETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEE------------------------EECCCCcEEEeeC
Confidence 69999999999999999999999999999999999 7788899999996
No 36
>KOG4226|consensus
Probab=98.98 E-value=4.8e-10 Score=106.48 Aligned_cols=68 Identities=25% Similarity=0.475 Sum_probs=60.8
Q ss_pred CCCCccccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCc
Q psy368 71 TLPPSKLELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGR 150 (320)
Q Consensus 71 ~~p~~~~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~ 150 (320)
..|+..+..+...+.+.|.|.|+.+|||.|-+|+.|+|.+++.|+||+|+ . .|+
T Consensus 97 ~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~-----------------------~---ng~ 150 (379)
T KOG4226|consen 97 EYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGS-----------------------Y---NGQ 150 (379)
T ss_pred cCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEeccCcceecc-----------------------c---CCe
Confidence 36778888888889999999999999999999999999999999999994 3 599
Q ss_pred ccccccCCcccccc
Q psy368 151 QGIFPSAYAVDVEY 164 (320)
Q Consensus 151 ~GifP~~yv~~~~~ 164 (320)
.||||+|||.+...
T Consensus 151 VGWFPSNYv~E~~d 164 (379)
T KOG4226|consen 151 VGWFPSNYVTEEVD 164 (379)
T ss_pred eccccccceehhcc
Confidence 99999999976554
No 37
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=98.93 E-value=5.4e-10 Score=81.26 Aligned_cols=52 Identities=35% Similarity=0.668 Sum_probs=45.9
Q ss_pred eEEeccCCCCCCCcccccCCCeEEEe-eccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 84 HRSLHKFIPRHFDEVELEIGDPIYVS-NEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 84 ~r~~~~f~p~~~~el~l~~gd~i~v~-~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
+||+++|.++..+||.|.+||+|.|. ...+++||.| .+ +|+.|+||++|++.
T Consensus 2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~------------------------~~--~g~~G~~P~~~v~~ 54 (55)
T PF07653_consen 2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLG------------------------EN--NGRRGWFPSSYVEE 54 (55)
T ss_dssp EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEE------------------------EE--TTEEEEEEGGGEEE
T ss_pred EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEE------------------------EE--CCcEEEEcHHHEEE
Confidence 68999999999999999999999998 7888899999 44 69999999999865
No 38
>KOG2070|consensus
Probab=98.93 E-value=4.7e-10 Score=113.16 Aligned_cols=56 Identities=34% Similarity=0.585 Sum_probs=51.9
Q ss_pred ceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcccc
Q psy368 83 THRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVDV 162 (320)
Q Consensus 83 ~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~~ 162 (320)
..||.|.|...+.|||.+.+||||+|....++|||||. . +|++||||+|||.++
T Consensus 19 vvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGT-----------------------l---ng~TGWFPsnYV~ei 72 (661)
T KOG2070|consen 19 VVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGT-----------------------L---NGRTGWFPSNYVREI 72 (661)
T ss_pred EEEEEeecccCCCceeccccCCEEEEEEeccCcceecc-----------------------c---cCccCccchHHHHHH
Confidence 57999999999999999999999999999999999993 3 499999999999988
Q ss_pred cc
Q psy368 163 EY 164 (320)
Q Consensus 163 ~~ 164 (320)
..
T Consensus 73 k~ 74 (661)
T KOG2070|consen 73 KS 74 (661)
T ss_pred hh
Confidence 74
No 39
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=98.88 E-value=1.8e-09 Score=75.96 Aligned_cols=55 Identities=33% Similarity=0.612 Sum_probs=49.2
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
..++++|+|.+.+.+||.|.+||+|.|....+++|+.| .+.+ |+.|+||.+|+..
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~------------------------~~~~-~~~G~vP~~~v~~ 57 (58)
T smart00326 3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKG------------------------RLGR-GKEGLFPSNYVEE 57 (58)
T ss_pred cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEE------------------------EeCC-CCEEEEchHHEEE
Confidence 45789999999999999999999999999989999999 4444 9999999999853
No 40
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=98.84 E-value=1.1e-07 Score=85.96 Aligned_cols=122 Identities=16% Similarity=0.287 Sum_probs=85.8
Q ss_pred CCceeEEEEecCceEecC---CC---chHHHHHHHHHHHhcCC-----CCcEEEEEEeCCceEEEeCCCCCccceeeeec
Q psy368 174 PKRERFLLGYLGSVETSA---HK---GNAVICQAVHKIRQTQH-----RPHSCILEVSDEGLRMVEKSRPGQHRKVRGLD 242 (320)
Q Consensus 174 ~~~~~F~VKYLGSVeV~~---~k---G~~Vv~eAV~kI~~~~~-----kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~ 242 (320)
.....|.|||||.++-.. .+ |.--+-++|..-...++ ....++|.||..||||++.+... . .
T Consensus 58 ~~~~ef~Vkyvg~i~~l~~~~~~~le~pl~lI~~ID~aQq~GkLP~v~~~eevil~VSKyGiKvt~~d~~~-----V--L 130 (200)
T PF10480_consen 58 ETCAEFRVKYVGAIESLQFSMSKSLEGPLELINYIDSAQQDGKLPFVPSDEEVILSVSKYGIKVTDNDQRD-----V--L 130 (200)
T ss_pred cchhheeeeeeeehhhcccccccccccHHHHHHHHHHHhhcCcCCCCCCCCeEEEEEeeccEEEeecCCcc-----e--e
Confidence 457889999999998875 22 22123344443333331 13788899999999999987542 2 2
Q ss_pred cccccceeEEEE-e-cC--CCCceeEEEeeCCCCceeeEEEEecC--CChHHHHHHHHHHHHHHHH
Q psy368 243 YFYSLKNVMFCG-F-HP--REPCYLGFISKHPNMQRFACHVFLAS--ESTRPVAEAVGRAFQRFYE 302 (320)
Q Consensus 243 ~f~pL~~ISFca-~-Dp--~d~r~FaFIak~~~~~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq 302 (320)
|=+||+.|--|. . |. .-..+||-=+.++....+.||||.|. ..|+.||..|++||+.+|-
T Consensus 131 ~RhpL~~Ivr~V~YdDGlG~g~~llAlK~~~~~~e~y~l~v~Qcss~~qA~~ICk~l~~aF~~v~t 196 (200)
T PF10480_consen 131 HRHPLHEIVRMVCYDDGLGAGKNLLALKVGDERQEEYQLWVYQCSSDEQAQEICKVLGQAFDSVLT 196 (200)
T ss_pred eeeeeeeEEEEEEEecCcCCcceEEEEEccCCCcceEEEEEEEcCCHHHHHHHHHHHHHHHHHhhc
Confidence 337888887553 2 32 13567776666666678999999995 7799999999999998863
No 41
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.80 E-value=7e-09 Score=72.22 Aligned_cols=53 Identities=36% Similarity=0.582 Sum_probs=47.0
Q ss_pred ceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 83 THRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 83 ~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
.++++|+|.++..+||.|.+||+|.|....+++|+.| .+.++ +.|+||.+|+.
T Consensus 1 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~------------------------~~~~~-~~G~vP~~~v~ 53 (54)
T cd00174 1 YVRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEG------------------------RLLGG-KRGLFPSNYVE 53 (54)
T ss_pred CEEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEE------------------------EECCC-CEEEEccccCc
Confidence 3689999999999999999999999999988999999 44433 99999999974
No 42
>KOG4448|consensus
Probab=98.75 E-value=9.1e-08 Score=92.60 Aligned_cols=123 Identities=16% Similarity=0.318 Sum_probs=101.7
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhcC----CCCcEEEEEEeCCceEEEeCCCCCccceeeeecccccccee
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ----HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNV 250 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~----~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~I 250 (320)
+-..|.|-|||++-...++|..+...++..|+... ++...+.|+|+..|++++...-. . +.|-.++|
T Consensus 59 edp~y~V~ylgnalti~argegc~ek~ls~iw~~~t~~~r~~~~M~Lkv~asglk~~h~qe~-------l--~ly~ahri 129 (374)
T KOG4448|consen 59 EDPPYVVFYLGNALTICARGEGCKEKTLSGIWHFYTMLKRKDNVMTLKVEASGLKAFHEQEG-------L--TLYWAHRI 129 (374)
T ss_pred CCCCeEEEEecceeEEEecCCCcchhhhhhHHHHHHhhcccCceeEEEEecccceeeeccCc-------c--eeeeeeee
Confidence 34579999999999999999999999999999872 56799999999999999876532 2 22668999
Q ss_pred EEEEecCCCCceeEEEeeCCCC---ceeeEEEEecC--CChHHHHHHHHHHHHHHHHHHHh
Q psy368 251 MFCGFHPREPCYLGFISKHPNM---QRFACHVFLAS--ESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 251 SFca~Dp~d~r~FaFIak~~~~---~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
.||..++..+++|++|.++... ....||...|. +.|+.|+..+.+--..+.++|..
T Consensus 130 tyc~a~~~~pkvf~wiyrhegk~~~~~lrchaVL~sk~k~aqai~d~l~~n~~~aLreFKr 190 (374)
T KOG4448|consen 130 TYCRAPSGYPKVFCWIYRHEGKQLKSELRCHAVLCSKKKHAQAIEDVLPANLLLALREFKR 190 (374)
T ss_pred eeeecCCCCCeEEEEEEecchhhhhhccceeeeeecchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999653 46899999995 66888888877666666666654
No 43
>KOG2199|consensus
Probab=98.67 E-value=6.4e-09 Score=102.79 Aligned_cols=58 Identities=26% Similarity=0.432 Sum_probs=51.8
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
..+..||||+|.....+||.|..||||.|.+.++-+||.| .|. +..||||+|||
T Consensus 214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG------------------------~~~--~~~GlFPsnfV 267 (462)
T KOG2199|consen 214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKG------------------------ENH--RGIGLFPSNFV 267 (462)
T ss_pred cchhhhhhhcccccCCCccceecCcEEEEcccCCcchhcc------------------------ccC--Ccccccchhhh
Confidence 4677999999999999999999999999999999999999 443 77899999999
Q ss_pred cccc
Q psy368 160 VDVE 163 (320)
Q Consensus 160 ~~~~ 163 (320)
..+-
T Consensus 268 T~~l 271 (462)
T KOG2199|consen 268 TADL 271 (462)
T ss_pred hhhh
Confidence 6543
No 44
>KOG0162|consensus
Probab=98.65 E-value=7.3e-08 Score=101.14 Aligned_cols=60 Identities=25% Similarity=0.499 Sum_probs=53.1
Q ss_pred cccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccc
Q psy368 76 KLELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFP 155 (320)
Q Consensus 76 ~~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP 155 (320)
....+...+.|+|+|..+..|||.|++||+|++.++...+||.|+ . .|+.||||
T Consensus 1046 ~~~~k~p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk-----------------------~---~~keG~~P 1099 (1106)
T KOG0162|consen 1046 AKPPKNPVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGK-----------------------L---NGKEGLFP 1099 (1106)
T ss_pred CCCCCCcceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhc-----------------------c---CCcccccc
Confidence 334466889999999999999999999999999999999999994 2 59999999
Q ss_pred cCCccc
Q psy368 156 SAYAVD 161 (320)
Q Consensus 156 ~~yv~~ 161 (320)
.||+.+
T Consensus 1100 ~~Yv~~ 1105 (1106)
T KOG0162|consen 1100 GNYVTE 1105 (1106)
T ss_pred cccccc
Confidence 999954
No 45
>KOG1029|consensus
Probab=98.64 E-value=2.3e-08 Score=105.20 Aligned_cols=57 Identities=30% Similarity=0.546 Sum_probs=50.5
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
...-++|+|.++++|||.|.+||+|.|.++.+..||.|. ++|..|+||||||..
T Consensus 1054 ~qviamYdY~AqndDELsF~kgdiI~VlnkdepeWW~Ge--------------------------~ng~sGLFPSNYV~k 1107 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWWSGE--------------------------RNGKSGLFPSNYVQK 1107 (1118)
T ss_pred ceeEEeeccccCCcccccccCCCEEEecCCCChhhhccc--------------------------ccCccccCccccccc
Confidence 345789999999999999999999999999999999993 359999999999965
Q ss_pred ccc
Q psy368 162 VEY 164 (320)
Q Consensus 162 ~~~ 164 (320)
...
T Consensus 1108 ~tt 1110 (1118)
T KOG1029|consen 1108 QTT 1110 (1118)
T ss_pred ccc
Confidence 543
No 46
>KOG2856|consensus
Probab=98.62 E-value=4.8e-08 Score=95.96 Aligned_cols=71 Identities=27% Similarity=0.485 Sum_probs=53.8
Q ss_pred CCCCCCCCCccccccc---cceEEeccCCCCCCCcccccCCCeEEEe-eccCCceecccccccccccccccccCCCCccc
Q psy368 66 SASPVTLPPSKLELLE---ATHRSLHKFIPRHFDEVELEIGDPIYVS-NEAEDLWCEGKAKESTYVPVVKASSRLPTPWM 141 (320)
Q Consensus 66 ~~~~~~~p~~~~~~~~---~~~r~~~~f~p~~~~el~l~~gd~i~v~-~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~ 141 (320)
+++++.+||-.-+... -..|+||+|.++..|||.|..||.|... ++.+.+||.|+
T Consensus 396 t~~nGdsnPfdd~a~~g~~v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Gr--------------------- 454 (472)
T KOG2856|consen 396 TPSNGDSNPFDDDAKGGDFVRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGR--------------------- 454 (472)
T ss_pred CCCCCCCCCCcccccCCceeeEEeeeccCcccccchhhccccHhhhcCCcccccccccc---------------------
Confidence 3444444333333333 4579999999999999999999999965 45778999994
Q ss_pred ceecccCCcccccccCCccc
Q psy368 142 LRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 142 ~~~nlrtg~~GifP~~yv~~ 161 (320)
|..|+.|+||+|||+-
T Consensus 455 ----l~~G~vGLyPAnYVe~ 470 (472)
T KOG2856|consen 455 ----LDSGRVGLYPANYVEC 470 (472)
T ss_pred ----ccCCcccccchhhhhc
Confidence 3469999999999953
No 47
>KOG4348|consensus
Probab=98.49 E-value=1.1e-07 Score=95.08 Aligned_cols=56 Identities=27% Similarity=0.565 Sum_probs=48.5
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeec--cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNE--AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~--~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
..||++|.|.|||+|||.|..||+|.+..+ .+-+||||. . +|+.|+||.|||
T Consensus 262 eycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGE-----------------------L---nGk~GvFPDNFv 315 (627)
T KOG4348|consen 262 EYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGE-----------------------L---NGKKGVFPDNFV 315 (627)
T ss_pred hheeeeeeecCCCccceeeccccEEEEecccccccceeeee-----------------------e---cCccccCCchhh
Confidence 358999999999999999999999996544 567999994 3 499999999999
Q ss_pred cccc
Q psy368 160 VDVE 163 (320)
Q Consensus 160 ~~~~ 163 (320)
.-++
T Consensus 316 ~lv~ 319 (627)
T KOG4348|consen 316 ELVQ 319 (627)
T ss_pred hhcC
Confidence 7766
No 48
>KOG3523|consensus
Probab=98.47 E-value=2.4e-08 Score=102.97 Aligned_cols=59 Identities=32% Similarity=0.630 Sum_probs=55.6
Q ss_pred eEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccccc
Q psy368 84 HRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVDVE 163 (320)
Q Consensus 84 ~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~~~ 163 (320)
..+++.|.|++.|||.|++||++.|+.+..|||++| ..+|.|..||||+.||++|.
T Consensus 611 v~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~G------------------------eRl~Dge~GWFP~~~veeI~ 666 (695)
T KOG3523|consen 611 VQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEG------------------------ERLRDGERGWFPSSYVEEIT 666 (695)
T ss_pred hheeeccccCCCceeeeehhhhhhhhhcCCCccccc------------------------cccccCccCcchHHHHHHhc
Confidence 678999999999999999999999999999999999 77999999999999999998
Q ss_pred ccc
Q psy368 164 YED 166 (320)
Q Consensus 164 ~~~ 166 (320)
.++
T Consensus 667 ~~~ 669 (695)
T KOG3523|consen 667 NPH 669 (695)
T ss_pred CHH
Confidence 753
No 49
>KOG2996|consensus
Probab=98.34 E-value=4.1e-07 Score=93.80 Aligned_cols=55 Identities=33% Similarity=0.610 Sum_probs=48.3
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEeec--cCCceecccccccccccccccccCCCCcccceecccCCcccccccCC
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSNE--AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAY 158 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~--~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~y 158 (320)
-.++.+-|+|.+|+-.||.|..||+|.++.. .+.|||.|+ +| |+.||||++|
T Consensus 805 ~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGe-----------------------vn---grvGwFPstY 858 (865)
T KOG2996|consen 805 VGTAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGE-----------------------VN---GRVGWFPSTY 858 (865)
T ss_pred eeeeeeccccCCCchhhcccccCCEEEEehhccccCceecce-----------------------ec---Cccccccccc
Confidence 4578889999999999999999999999886 457999994 44 9999999999
Q ss_pred ccc
Q psy368 159 AVD 161 (320)
Q Consensus 159 v~~ 161 (320)
|++
T Consensus 859 Vee 861 (865)
T KOG2996|consen 859 VEE 861 (865)
T ss_pred ccc
Confidence 954
No 50
>KOG1702|consensus
Probab=98.34 E-value=2.6e-07 Score=84.94 Aligned_cols=57 Identities=30% Similarity=0.440 Sum_probs=52.6
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
.+|+|+.|+|.++++||+.+.-||.|.-...++|+|+.| +-.|||.+|++|.||++
T Consensus 207 gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmyg------------------------tv~rtg~tGmlpaNyie 262 (264)
T KOG1702|consen 207 GKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYG------------------------TVVRTGWTGMLPANYIE 262 (264)
T ss_pred CccchhhccCcccCcceeEEecCCeEEEEEeccCCceee------------------------EEEeccccCCCchhhee
Confidence 578999999999999999999999999888899999999 55789999999999986
Q ss_pred c
Q psy368 161 D 161 (320)
Q Consensus 161 ~ 161 (320)
.
T Consensus 263 ~ 263 (264)
T KOG1702|consen 263 F 263 (264)
T ss_pred e
Confidence 4
No 51
>KOG1029|consensus
Probab=98.28 E-value=4.1e-07 Score=96.05 Aligned_cols=59 Identities=34% Similarity=0.558 Sum_probs=51.6
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeec--cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNE--AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~--~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
-.+||||.|..|++||+.++.||||.|.+. .+-+|..|.. .|..||||.|||
T Consensus 694 vkyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel--------------------------~gktGWFPenyv 747 (1118)
T KOG1029|consen 694 VKYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGEL--------------------------RGKTGWFPENYV 747 (1118)
T ss_pred EEEeeecccccCCcccccccCCCEEEEehhccCCccccccee--------------------------ccccCcCcHHHH
Confidence 458999999999999999999999999875 5779999953 499999999999
Q ss_pred ccccccc
Q psy368 160 VDVEYED 166 (320)
Q Consensus 160 ~~~~~~~ 166 (320)
+.++..+
T Consensus 748 Eki~~~e 754 (1118)
T KOG1029|consen 748 EKIPAVE 754 (1118)
T ss_pred hhcccCC
Confidence 8887543
No 52
>KOG2546|consensus
Probab=97.97 E-value=5.1e-06 Score=83.11 Aligned_cols=55 Identities=27% Similarity=0.567 Sum_probs=49.6
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
...+++|+|....+|||.+..|-+|||..+.+|+|||| + ..|-+|+||.|||..
T Consensus 424 EkVv~iydy~~~KddeLsf~E~ailyv~kknddgw~Eg------------------------V--~~~VTglFpgnyve~ 477 (483)
T KOG2546|consen 424 EKVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEG------------------------V--QDGVTGLFPGNYVEP 477 (483)
T ss_pred HHHHhhcccccccccccccccccEEEEEEecCCcchhh------------------------e--ecCcceeccCccccc
Confidence 45689999999999999999999999999999999999 3 368899999999965
Q ss_pred c
Q psy368 162 V 162 (320)
Q Consensus 162 ~ 162 (320)
+
T Consensus 478 ~ 478 (483)
T KOG2546|consen 478 L 478 (483)
T ss_pred c
Confidence 4
No 53
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. EPS8 is a regulator of Rac signaling. It consists of a PTB and an SH3 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=97.84 E-value=0.00017 Score=61.91 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=89.9
Q ss_pred eEEEEecCceEecCCCchHHHHHHHHHHHhcC--CC--CcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEE
Q psy368 178 RFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ--HR--PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFC 253 (320)
Q Consensus 178 ~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~--~k--p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFc 253 (320)
+|.|-=|=-..+....|..-+.+||++++..- .+ ++...|.|+..-|.+.|..||+ ..-. ||+..|..|
T Consensus 3 qy~veHL~Tf~l~~~~~~~~~~D~i~kL~~le~~G~iW~Q~m~lqv~~~~v~LlD~etk~-----elE~--fpl~~I~~~ 75 (127)
T cd01210 3 QYLVEHLATFTVGKQSGVVYPEDAMRKLLQMDKQGRVWSQKMILRVRYQWVTLLDYETKE-----ELES--YPLSLIQEP 75 (127)
T ss_pred eeeeeeeEEEEEcCccCcCCHHHHHHHHHHHHhcCCccccceEEEEcCCeEEEEcCCCcC-----hhhc--CCHhhcccc
Confidence 34444455555666667888899999998662 23 5999999999999999999974 3333 899999998
Q ss_pred Eec---CCCCceeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHHH
Q psy368 254 GFH---PREPCYLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAFQ 298 (320)
Q Consensus 254 a~D---p~d~r~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AFq 298 (320)
..- ...+.+..|++++++.++-.-|+|.|+ -.|..|...|..|.+
T Consensus 76 ~a~~~~~~ynslL~~vvq~~~~~~~e~hlFQc~~v~A~~i~~DL~~a~~ 124 (127)
T cd01210 76 TAFTSMELYNSILLFVVQEPGGSRTEMHIFQCQRVGAEHLVEDLQQALS 124 (127)
T ss_pred ceecCCCCcCceEEEEEeCCCCCCCcEEEEEeccccHHHHHHHHHHHHh
Confidence 543 334678899999998888899999995 779999999998864
No 54
>KOG3601|consensus
Probab=97.69 E-value=2.4e-05 Score=72.27 Aligned_cols=57 Identities=26% Similarity=0.544 Sum_probs=51.1
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
....+++|+|.|+.+.||.+..||+|.|....+-.||.|+. .|+.||||++||.
T Consensus 163 ~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~--------------------------lg~agiFpagyv~ 216 (222)
T KOG3601|consen 163 NYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSK--------------------------LGRAGIFPAGYVA 216 (222)
T ss_pred chhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhccc--------------------------cCceeeecCcccc
Confidence 45579999999999999999999999999999999999943 3999999999997
Q ss_pred ccc
Q psy368 161 DVE 163 (320)
Q Consensus 161 ~~~ 163 (320)
...
T Consensus 217 p~d 219 (222)
T KOG3601|consen 217 PSD 219 (222)
T ss_pred ccc
Confidence 654
No 55
>KOG1264|consensus
Probab=97.68 E-value=2.2e-05 Score=83.82 Aligned_cols=62 Identities=24% Similarity=0.366 Sum_probs=53.9
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
.+.+++|||+|..+.+|||.+-+|-+|....+.+++||.|.- -+..+|+||+|||
T Consensus 773 ~~vt~kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdY-------------------------Gg~iq~wfPsnyV 827 (1267)
T KOG1264|consen 773 PQVTVKALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDY-------------------------GGRIQQWFPSNYV 827 (1267)
T ss_pred cchhhhhhhccccCCcccccccccceeEeeeccCCceeeccc-------------------------ccceeeeccHHHh
Confidence 368999999999999999999999999999999999999932 1346789999999
Q ss_pred ccccccc
Q psy368 160 VDVEYED 166 (320)
Q Consensus 160 ~~~~~~~ 166 (320)
+++..+.
T Consensus 828 eei~~~~ 834 (1267)
T KOG1264|consen 828 EEISTAD 834 (1267)
T ss_pred hhhcccc
Confidence 9997643
No 56
>KOG3875|consensus
Probab=97.41 E-value=2.9e-05 Score=75.27 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=47.8
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccCC-----ceecccccccccccccccccCCCCcccceecccCCccccccc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAED-----LWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPS 156 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~-----~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~ 156 (320)
-++||+|+|+++++-||.|.+||.+.|..+.++ .||.+ +..-.|.+||+|.
T Consensus 269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~l------------------------at~dg~~tG~iP~ 324 (362)
T KOG3875|consen 269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLL------------------------ATRDGGTTGLIPI 324 (362)
T ss_pred HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceee------------------------eeccCCeeeeeeh
Confidence 568999999999999999999999998765432 25555 2223689999999
Q ss_pred CCcccccccc
Q psy368 157 AYAVDVEYED 166 (320)
Q Consensus 157 ~yv~~~~~~~ 166 (320)
|||.-+.-++
T Consensus 325 NYvkIi~rq~ 334 (362)
T KOG3875|consen 325 NYVKIIGRQP 334 (362)
T ss_pred hhhhhhhcCC
Confidence 9997665543
No 57
>KOG4792|consensus
Probab=97.31 E-value=0.00016 Score=67.76 Aligned_cols=56 Identities=20% Similarity=0.477 Sum_probs=49.8
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
-..|++|+|.-..+++|.+++|+++.|.++.++.||+. .|- .|++|++|.+||+-
T Consensus 125 ~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~A------------------------rns-~Gk~GmIPvpYVe~ 179 (293)
T KOG4792|consen 125 EYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNA------------------------RNS-EGKRGMIPVPYVEK 179 (293)
T ss_pred hheeeeeccCCCccccCCcccCcEEEEecCcHHHhhhh------------------------hcc-CCcccceechHHHh
Confidence 45789999999999999999999999999999999999 442 59999999999854
Q ss_pred c
Q psy368 162 V 162 (320)
Q Consensus 162 ~ 162 (320)
.
T Consensus 180 ~ 180 (293)
T KOG4792|consen 180 Y 180 (293)
T ss_pred h
Confidence 3
No 58
>KOG3655|consensus
Probab=97.24 E-value=0.00018 Score=73.11 Aligned_cols=57 Identities=23% Similarity=0.427 Sum_probs=51.7
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
.+++++|+|+|..-..-||.+..+|+|-+....+++||.|. +-.|+.|+||+|||
T Consensus 426 ~~q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~-------------------------~pdG~~glfPaNyV 480 (484)
T KOG3655|consen 426 EPQTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQ-------------------------GPDGEVGLFPANYV 480 (484)
T ss_pred cCCCccccccccccCCcccccCCccccccccccCCcccccc-------------------------CCCCCcCccccccc
Confidence 67889999999999999999999999999999999999993 24699999999999
Q ss_pred cc
Q psy368 160 VD 161 (320)
Q Consensus 160 ~~ 161 (320)
.-
T Consensus 481 ~l 482 (484)
T KOG3655|consen 481 EL 482 (484)
T ss_pred cc
Confidence 53
No 59
>KOG4278|consensus
Probab=97.18 E-value=0.00033 Score=74.05 Aligned_cols=56 Identities=23% Similarity=0.495 Sum_probs=48.3
Q ss_pred ceEEeccCCCCCCCcccccCCCeEEEeec-cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 83 THRSLHKFIPRHFDEVELEIGDPIYVSNE-AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 83 ~~r~~~~f~p~~~~el~l~~gd~i~v~~~-~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
.+.|||+|+...+..|.|.+||.++|... -++-|||.+- .+|+ ||+|+||..+
T Consensus 92 LFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEart-------------------------KNGq-GWVPSNyItP 145 (1157)
T KOG4278|consen 92 LFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEART-------------------------KNGQ-GWVPSNYITP 145 (1157)
T ss_pred eeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecc-------------------------cCCC-cccccccccc
Confidence 78999999999999999999999999876 4678999932 2477 9999999988
Q ss_pred ccc
Q psy368 162 VEY 164 (320)
Q Consensus 162 ~~~ 164 (320)
+..
T Consensus 146 vNS 148 (1157)
T KOG4278|consen 146 VNS 148 (1157)
T ss_pred ccc
Confidence 764
No 60
>KOG1843|consensus
Probab=97.08 E-value=0.00073 Score=67.80 Aligned_cols=53 Identities=25% Similarity=0.517 Sum_probs=46.7
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeeccC--CceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNEAE--DLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~--~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
-.++++|.|.-+...+|.|.+||+|.+..+.+ ..||.| ++.|..||||.|||
T Consensus 417 n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtg--------------------------r~~~~egifPanyv 470 (473)
T KOG1843|consen 417 NIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTG--------------------------RGNGYEGIFPANYV 470 (473)
T ss_pred ceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHh--------------------------hcccccccccccee
Confidence 37899999999999999999999999887744 589999 34699999999998
Q ss_pred c
Q psy368 160 V 160 (320)
Q Consensus 160 ~ 160 (320)
.
T Consensus 471 ~ 471 (473)
T KOG1843|consen 471 S 471 (473)
T ss_pred c
Confidence 5
No 61
>KOG0507|consensus
Probab=96.99 E-value=4.3e-05 Score=81.09 Aligned_cols=125 Identities=17% Similarity=0.198 Sum_probs=104.4
Q ss_pred CceeEEE-EecCceEecCCCchHHHHHHHHHHHhcC-------CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccc
Q psy368 175 KRERFLL-GYLGSVETSAHKGNAVICQAVHKIRQTQ-------HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYS 246 (320)
Q Consensus 175 ~~~~F~V-KYLGSVeV~~~kG~~Vv~eAV~kI~~~~-------~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~p 246 (320)
.-+.|.. .|+|++.....+|++.++.|..++.... ++...+.|.++-+|.+.+|...+. .... ++
T Consensus 505 ~~~~~~d~ty~nsm~i~dlr~t~ltedaeaklg~n~~~slevrk~v~ti~~s~tYkGst~Ld~d~~~-----~i~e--~e 577 (854)
T KOG0507|consen 505 ASCQYPDKTYLNSMLIKDLRGTELTEDAEAKLGLNQSKSLEVRKKVPTIILSLTYKGSTFLDADNKN-----RIAE--HE 577 (854)
T ss_pred hhhccchhhhhcchhhhhcccccccchhhhhccccccchHHHHhhccchhhheeecCccccchhccc-----CCCC--CC
Confidence 3456666 5999999999999999999999987653 233555889999999988887663 3333 78
Q ss_pred cceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecC--CChHHHHHHHHHHHHHHHHHHHh
Q psy368 247 LKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLAS--ESTRPVAEAVGRAFQRFYEKFIE 306 (320)
Q Consensus 247 L~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~--~sA~~Ia~AIG~AFqvayq~~l~ 306 (320)
+.+++-.+.|+.|...|+||+++-..+..+||+|.-- ...-.+..+++|||.+.|+.-+.
T Consensus 578 ~~ra~casp~m~ds~~s~~~tk~l~~qh~yg~~~ed~sv~l~~~ei~T~~q~~s~e~~~~~q 639 (854)
T KOG0507|consen 578 IRRASCASPDMEDSTTSAYITKDLANQHHYGHVFEDFSVNLIYEEILTLGQAFSVEYQLALQ 639 (854)
T ss_pred CCcccccCCCchhhhHHHHHHHhhccccccccccccccccccchhhhhcccccccccchhhh
Confidence 9999988899999999999999988889999999873 66788999999999999987665
No 62
>KOG4792|consensus
Probab=96.91 E-value=0.0025 Score=60.04 Aligned_cols=63 Identities=27% Similarity=0.449 Sum_probs=53.1
Q ss_pred cccccceEEeccCCCCCCC--cccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccc
Q psy368 78 ELLEATHRSLHKFIPRHFD--EVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFP 155 (320)
Q Consensus 78 ~~~~~~~r~~~~f~p~~~~--el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP 155 (320)
.-+.+.+|++++=+|.--| -|.|++||+|.|....-.+-|||. . +|++|.||
T Consensus 224 ~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegE-----------------------l---nGk~G~fP 277 (293)
T KOG4792|consen 224 QNLPAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGE-----------------------L---NGKIGHFP 277 (293)
T ss_pred cCCChheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeee-----------------------e---cCcccccc
Confidence 4467889999999998776 588999999999999888888995 3 59999999
Q ss_pred cCCcccccccc
Q psy368 156 SAYAVDVEYED 166 (320)
Q Consensus 156 ~~yv~~~~~~~ 166 (320)
-.|++-...++
T Consensus 278 fThvrf~d~~~ 288 (293)
T KOG4792|consen 278 FTHVRFTDVQN 288 (293)
T ss_pred ceeEEeeccCC
Confidence 99998776654
No 63
>KOG4226|consensus
Probab=96.89 E-value=0.00085 Score=64.57 Aligned_cols=60 Identities=20% Similarity=0.384 Sum_probs=50.7
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeec--cCCceecccccccccccccccccCCCCcccceecccCCcccccccC
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNE--AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSA 157 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~--~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~ 157 (320)
.-....+||.|...+..||.+++||.+.|.+. .|..||.. .|. .|+.|++|.|
T Consensus 190 vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwka------------------------rn~-~G~vGLVPrN 244 (379)
T KOG4226|consen 190 VLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKA------------------------RNA-RGQVGLVPRN 244 (379)
T ss_pred EEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhh------------------------ccc-CCccceeecc
Confidence 45678999999999999999999999998775 45689988 454 4999999999
Q ss_pred Ccccccc
Q psy368 158 YAVDVEY 164 (320)
Q Consensus 158 yv~~~~~ 164 (320)
|++.+..
T Consensus 245 Yv~vl~d 251 (379)
T KOG4226|consen 245 YVVVLSD 251 (379)
T ss_pred eEEEecc
Confidence 9976654
No 64
>KOG4429|consensus
Probab=96.82 E-value=0.0008 Score=65.25 Aligned_cols=60 Identities=23% Similarity=0.181 Sum_probs=52.3
Q ss_pred ccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCccccccc
Q psy368 77 LELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPS 156 (320)
Q Consensus 77 ~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~ 156 (320)
.++-...+.++|.|..++.|||.++|||++.+.+.-+.+||-|+ + .|..|-||+
T Consensus 359 aelek~lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~r-----------------------l---~gd~~hf~A 412 (421)
T KOG4429|consen 359 AELEKILCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCR-----------------------L---LGDFEHFHA 412 (421)
T ss_pred HHHHHHHhhhhhccccccccccCCcccceeeecCcccCCCceee-----------------------e---ccccCCCcH
Confidence 34455679999999999999999999999999999999999993 3 399999999
Q ss_pred CCcccc
Q psy368 157 AYAVDV 162 (320)
Q Consensus 157 ~yv~~~ 162 (320)
+|+...
T Consensus 413 a~iEea 418 (421)
T KOG4429|consen 413 AEIEEA 418 (421)
T ss_pred HHHHHh
Confidence 998654
No 65
>KOG4575|consensus
Probab=96.03 E-value=0.0065 Score=63.99 Aligned_cols=56 Identities=21% Similarity=0.358 Sum_probs=48.9
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceeccc-CCcccccccCC
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLR-TGRQGIFPSAY 158 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlr-tg~~GifP~~y 158 (320)
+..+.||+|...-+++.+|-+..||+|.+.+-.++.||-| . +| +...|+||+||
T Consensus 7 ~p~~vrA~y~w~ge~eGdl~f~egDlie~trI~dgkwwi~------------------------l-hrNk~~~g~fpsNF 61 (874)
T KOG4575|consen 7 LPCMVRALYAWPGEREGDLKFTEGDLIEQTRIEDGKWWIL------------------------L-HRNKDEDGLFPSNF 61 (874)
T ss_pred CCceEEeeccCCCCcccccceecccceeEEeeccceeeee------------------------e-eecccccccCcccc
Confidence 5678999999999999999999999999998887777777 2 34 68999999999
Q ss_pred cc
Q psy368 159 AV 160 (320)
Q Consensus 159 v~ 160 (320)
|.
T Consensus 62 vh 63 (874)
T KOG4575|consen 62 VH 63 (874)
T ss_pred ee
Confidence 83
No 66
>KOG2528|consensus
Probab=96.02 E-value=0.0031 Score=63.93 Aligned_cols=56 Identities=25% Similarity=0.520 Sum_probs=48.5
Q ss_pred ceEEeccCCCCCCCcccccCCCeEEEeec-cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCccc
Q psy368 83 THRSLHKFIPRHFDEVELEIGDPIYVSNE-AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVD 161 (320)
Q Consensus 83 ~~r~~~~f~p~~~~el~l~~gd~i~v~~~-~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~ 161 (320)
.+|++|+|.-....||.+..||++.+..+ .-++|++| .|- .|.+|.||..||+-
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg------------------------~Ns-rge~GlfPa~yVeV 58 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEG------------------------SNS-RGERGLFPASYVEV 58 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccC------------------------CCc-cCccCCCcccceee
Confidence 47999999999999999999999998665 56899999 555 49999999999975
Q ss_pred cc
Q psy368 162 VE 163 (320)
Q Consensus 162 ~~ 163 (320)
+.
T Consensus 59 ~~ 60 (490)
T KOG2528|consen 59 TR 60 (490)
T ss_pred ec
Confidence 54
No 67
>KOG0197|consensus
Probab=95.98 E-value=0.0043 Score=63.61 Aligned_cols=58 Identities=21% Similarity=0.430 Sum_probs=50.8
Q ss_pred ccceEEeccCCCCCCCcccccCCCe-EEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDP-IYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~-i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
.....++|+|.++.+.+|.|..||+ ..+.+..+..||.- +++.+|..|+.|+||+
T Consensus 11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~a------------------------r~~~~~~~g~ip~N~v 66 (468)
T KOG0197|consen 11 ETIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRA------------------------RSLQLGQEGYIPSNYV 66 (468)
T ss_pred cceEEEeccccCCCccccccccCceEEEeeccCChhHHHH------------------------HHhhcCCCCcCcCcee
Confidence 4568999999999999999999999 66788888999998 5555899999999999
Q ss_pred ccc
Q psy368 160 VDV 162 (320)
Q Consensus 160 ~~~ 162 (320)
+..
T Consensus 67 ~~~ 69 (468)
T KOG0197|consen 67 ARN 69 (468)
T ss_pred ecc
Confidence 864
No 68
>KOG3632|consensus
Probab=95.81 E-value=0.034 Score=61.23 Aligned_cols=64 Identities=30% Similarity=0.439 Sum_probs=53.3
Q ss_pred ccccccceEEeccCCC------CCCCcccccCCCeEEEeecc-CCceecccccccccccccccccCCCCcccceecccCC
Q psy368 77 LELLEATHRSLHKFIP------RHFDEVELEIGDPIYVSNEA-EDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTG 149 (320)
Q Consensus 77 ~~~~~~~~r~~~~f~p------~~~~el~l~~gd~i~v~~~~-~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg 149 (320)
.+-.-+.+.++|.|+| ..+-||.|-.|+.|||+.+. +|+.+||. |+.|
T Consensus 443 ~~gk~q~~~arySynPFegpNenpeaelpltAg~yiYiyGdmdEdgfyege-------------------------L~dg 497 (1335)
T KOG3632|consen 443 VEGKAQPFTARYSYNPFEGPNENPEAELPLTAGYYIYIYGDMDEDGFYEGE-------------------------LRDG 497 (1335)
T ss_pred ccCccceEEEEEeccCCcCCCCCCccccccccceEEEEecCCCccccceee-------------------------eecc
Confidence 3445567899999999 45679999999999999874 57999992 7899
Q ss_pred cccccccCCccccccc
Q psy368 150 RQGIFPSAYAVDVEYE 165 (320)
Q Consensus 150 ~~GifP~~yv~~~~~~ 165 (320)
+.|+.|+|||.-|+..
T Consensus 498 rrglvPsnFVe~v~d~ 513 (1335)
T KOG3632|consen 498 RRGLVPSNFVEVVTDT 513 (1335)
T ss_pred cccCCCchheEEeccc
Confidence 9999999999877643
No 69
>KOG0515|consensus
Probab=95.67 E-value=0.0065 Score=63.05 Aligned_cols=52 Identities=23% Similarity=0.461 Sum_probs=41.8
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEeec---cCCceecccccccccccccccccCCCCcccceecccCCcccccccCC
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSNE---AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAY 158 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~~---~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~y 158 (320)
...-|||+|.++..|||.+..||.+.|.+. .+-.||-.+ . .|+.|++|.||
T Consensus 684 G~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~-----------------------l---ng~eGyVPRny 737 (752)
T KOG0515|consen 684 GVVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWAR-----------------------L---NGEEGYVPRNY 737 (752)
T ss_pred ceeEEeecccccccccccccCCceeEEEecCCcchhhhhhHh-----------------------h---cCcccccchhh
Confidence 456899999999999999999999997765 333555541 3 49999999998
Q ss_pred c
Q psy368 159 A 159 (320)
Q Consensus 159 v 159 (320)
.
T Consensus 738 l 738 (752)
T KOG0515|consen 738 L 738 (752)
T ss_pred h
Confidence 7
No 70
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=95.63 E-value=0.14 Score=37.82 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=53.9
Q ss_pred CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCC---CCceeEEEeeCCCCceeeEEEEecCC--
Q psy368 210 HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPR---EPCYLGFISKHPNMQRFACHVFLASE-- 284 (320)
Q Consensus 210 ~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~---d~r~FaFIak~~~~~rf~CHVF~c~~-- 284 (320)
...+++.+.++..+|.+.+.+... .... ..++|..+. |..+++ .+..|.++..++ ...||+|.|+.
T Consensus 17 ~~w~~~~~~l~~~~l~~~~~~~~~----~~~~-~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~---~~~~~~~~~~~~~ 87 (99)
T cd00900 17 KRWKRRWFFLFDDGLLLYKSDDKK----EIKP-GSIPLSEIS-VEEDPDGSDDPNCFAIVTKDR---GRRVFVFQADSEE 87 (99)
T ss_pred cCceeeEEEEECCEEEEEEcCCCC----cCCC-CEEEccceE-EEECCCCCCCCceEEEECCCC---CcEEEEEEcCCHH
Confidence 457899999999999999888652 1110 237899999 766654 467888887764 35799999974
Q ss_pred ChHHHHHHHHH
Q psy368 285 STRPVAEAVGR 295 (320)
Q Consensus 285 sA~~Ia~AIG~ 295 (320)
.++....+|.+
T Consensus 88 ~~~~W~~al~~ 98 (99)
T cd00900 88 EAQEWVEALQQ 98 (99)
T ss_pred HHHHHHHHHhc
Confidence 35555555443
No 71
>KOG3705|consensus
Probab=95.60 E-value=0.01 Score=59.96 Aligned_cols=53 Identities=30% Similarity=0.502 Sum_probs=44.9
Q ss_pred ceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 83 THRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 83 ~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
..+++++.+||..+|+.|++||.|-|-..-=|+.-.| +|-+|++.|+|||-=+
T Consensus 511 n~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG------------------------~Nr~t~~~GlfPSyKv 563 (580)
T KOG3705|consen 511 NVIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKG------------------------TNRQTYKEGLFPSYKV 563 (580)
T ss_pred ceEEEEecCCCcccccCcccCCeeeeccccccccccc------------------------ccccccccCCCcccee
Confidence 3589999999999999999999998866555555566 8999999999999755
No 72
>KOG1451|consensus
Probab=95.56 E-value=0.015 Score=61.12 Aligned_cols=56 Identities=29% Similarity=0.502 Sum_probs=48.4
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEE-EeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCC
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIY-VSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAY 158 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~-v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~y 158 (320)
+.+....+|.-.+.|+-|+.++.|-++. |+.-.++||..|. . .|+.|+.|+||
T Consensus 755 ~~rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~Gt-----------------------L---nGktglip~ny 808 (812)
T KOG1451|consen 755 LSRRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGT-----------------------L---NGKTGLIPSNY 808 (812)
T ss_pred ccccccceeccCCCCcccccccCcceeeeecccCCCCceeee-----------------------c---CCCcccCcccc
Confidence 3456788999999999999999998888 7878899999993 3 49999999999
Q ss_pred ccc
Q psy368 159 AVD 161 (320)
Q Consensus 159 v~~ 161 (320)
|++
T Consensus 809 ve~ 811 (812)
T KOG1451|consen 809 VEP 811 (812)
T ss_pred cCc
Confidence 964
No 73
>KOG3632|consensus
Probab=95.35 E-value=0.018 Score=63.36 Aligned_cols=63 Identities=21% Similarity=0.370 Sum_probs=53.3
Q ss_pred cccccceEEeccCCCCC--------CCcccccCCCeEEEeec-cCCceecccccccccccccccccCCCCcccceecccC
Q psy368 78 ELLEATHRSLHKFIPRH--------FDEVELEIGDPIYVSNE-AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRT 148 (320)
Q Consensus 78 ~~~~~~~r~~~~f~p~~--------~~el~l~~gd~i~v~~~-~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrt 148 (320)
++.-+.+.|||||.|.. +.||.|..|+||.|... +.|+.|.|.+ .
T Consensus 1135 ~lparifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~--------------------------n 1188 (1335)
T KOG3632|consen 1135 ALPARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGEL--------------------------N 1188 (1335)
T ss_pred cCcceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeeccc--------------------------c
Confidence 45566799999999874 57999999999999875 6689999953 4
Q ss_pred CcccccccCCcccccccc
Q psy368 149 GRQGIFPSAYAVDVEYED 166 (320)
Q Consensus 149 g~~GifP~~yv~~~~~~~ 166 (320)
|+.|++|.|.|++++...
T Consensus 1189 gr~GlIPcNmvae~~vd~ 1206 (1335)
T KOG3632|consen 1189 GRRGLIPCNMVAEQPVDN 1206 (1335)
T ss_pred cccccccccccccccCCc
Confidence 999999999999998765
No 74
>KOG4773|consensus
Probab=95.34 E-value=0.0033 Score=62.10 Aligned_cols=61 Identities=21% Similarity=0.419 Sum_probs=53.9
Q ss_pred ccccccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCccccccc
Q psy368 77 LELLEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPS 156 (320)
Q Consensus 77 ~~~~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~ 156 (320)
+-+..++.+++++|.....-||.|..|||+++..+++..||+|+- -|.+||||.
T Consensus 171 ~~~~~q~~~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk~--------------------------R~~~g~yp~ 224 (386)
T KOG4773|consen 171 LGMAAQRAEASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGKV--------------------------RGLTGYYPD 224 (386)
T ss_pred chhhhHHHHhhccCCCCccceeeeehhhHHHHHhhcccceeeeee--------------------------ccccccccH
Confidence 344568899999999999999999999999999999999999953 388999999
Q ss_pred CCccccc
Q psy368 157 AYAVDVE 163 (320)
Q Consensus 157 ~yv~~~~ 163 (320)
.|+..++
T Consensus 225 sF~~~ld 231 (386)
T KOG4773|consen 225 SFVKQLD 231 (386)
T ss_pred Hhhhhhc
Confidence 9997664
No 75
>KOG3557|consensus
Probab=95.13 E-value=0.029 Score=59.30 Aligned_cols=118 Identities=14% Similarity=0.175 Sum_probs=92.8
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhcCCC----CcEEEEEEeCCceEEEeCCCCCccceeeeecccccccee
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQHR----PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNV 250 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~~k----p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~I 250 (320)
+.-.|.|-=|-..-+....|+.-+.+||+|+..+..+ .|.++|.|..+-+.+.|.+++. .+.. ||+..|
T Consensus 44 d~~qyrveHL~Tf~~~ksd~i~~~eD~~rkL~~ld~~~~vWsQ~miLqv~d~~v~llD~Es~~-----ele~--fpl~~i 116 (721)
T KOG3557|consen 44 DLSQYRVEHLATFILGKSDGITGPEDAIRKLLQLDAQGGVWSQDMILQVDDQWVLLLDIETKE-----ELES--FPLSTI 116 (721)
T ss_pred ccccccchhhhheecccccccccHHHHhHHHHhhccccccccccceeEeccCceeeechhhhH-----HHhh--cCcchh
Confidence 3344555555555555677888889999999998543 4999999999999999999984 3333 899999
Q ss_pred EEEEec---CCCCceeEEEeeCCCCceeeEEEEecC-CChHHHHHHHHHHHHH
Q psy368 251 MFCGFH---PREPCYLGFISKHPNMQRFACHVFLAS-ESTRPVAEAVGRAFQR 299 (320)
Q Consensus 251 SFca~D---p~d~r~FaFIak~~~~~rf~CHVF~c~-~sA~~Ia~AIG~AFqv 299 (320)
-+|..- -...-+.++|+..+...++.-|.|.|+ ..|..|.+-|..|.+-
T Consensus 117 q~~~a~~~~~~y~siL~lv~qep~~~r~d~h~Fq~~ev~Aell~edi~~al~~ 169 (721)
T KOG3557|consen 117 QRPQAVLNMCSYNSILSLVVQEPGRSRPDVHIFQCQEVGAELLREDIQGALSN 169 (721)
T ss_pred hhhhhhcccccccchhheeeccCCCCCCceeEEeeccchhHHHHHhHHHHHhh
Confidence 999643 234567889999999999999999996 7789999999888754
No 76
>KOG2222|consensus
Probab=93.99 E-value=0.014 Score=60.04 Aligned_cols=55 Identities=25% Similarity=0.500 Sum_probs=44.5
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEee-ccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSN-EAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~-~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
+.+++||+|.-..+|||-+.+.|+|.+.. +.+-.|..- .| |-+||||+.||+
T Consensus 549 krakal~df~r~dddelgfrkndiitiisekdehcwvge------------------------ln---glrgwfpakfve 601 (848)
T KOG2222|consen 549 KRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGE------------------------LN---GLRGWFPAKFVE 601 (848)
T ss_pred HHHHHHhhhhhccccccccccccEEEEeecCCcceeeec------------------------cc---cccccchHHHHH
Confidence 45789999999999999999999999655 455566644 54 999999999985
Q ss_pred ccc
Q psy368 161 DVE 163 (320)
Q Consensus 161 ~~~ 163 (320)
-++
T Consensus 602 lld 604 (848)
T KOG2222|consen 602 LLD 604 (848)
T ss_pred HHH
Confidence 443
No 77
>KOG2996|consensus
Probab=93.81 E-value=0.039 Score=58.01 Aligned_cols=68 Identities=26% Similarity=0.321 Sum_probs=46.7
Q ss_pred ccccCCCeEEEeec-cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcccccccccccCCCCCCc
Q psy368 98 VELEIGDPIYVSNE-AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAVDVEYEDLQTTTPKPKR 176 (320)
Q Consensus 98 l~l~~gd~i~v~~~-~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~~~~~~~~~~~~~~~~~ 176 (320)
|.|+.||++.+... .+..||+| .|+.+++.|+||++-|.+.+..+-++.. .+--
T Consensus 627 l~~~~gdvlel~~~d~~s~~w~g------------------------r~~~sr~sg~fpss~vkp~~~vpr~~~~-~~~d 681 (865)
T KOG2996|consen 627 LVLQEGDVLELLKGDAESSWWEG------------------------RNHGSRESGNFPSSTVKPCPSVPRQQDY-VPTD 681 (865)
T ss_pred eEecCCceeehhcCCCCCccccc------------------------CCccCCccCCCCccccCcCCCCCCCCCC-Cccc
Confidence 66889999997655 56799999 7889999999999998755543211100 1222
Q ss_pred eeEEEEecCceEec
Q psy368 177 ERFLLGYLGSVETS 190 (320)
Q Consensus 177 ~~F~VKYLGSVeV~ 190 (320)
-+-..+|.|.+|-.
T Consensus 682 ~s~~~WyaG~MERa 695 (865)
T KOG2996|consen 682 YSEFPWYAGEMERA 695 (865)
T ss_pred hhhhhhhcchHhhh
Confidence 33345788887754
No 78
>KOG3771|consensus
Probab=93.78 E-value=0.062 Score=54.95 Aligned_cols=38 Identities=29% Similarity=0.439 Sum_probs=32.7
Q ss_pred cceEEeccCCCCCCCcccccCCCeEEEee-ccCCceecc
Q psy368 82 ATHRSLHKFIPRHFDEVELEIGDPIYVSN-EAEDLWCEG 119 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~el~l~~gd~i~v~~-~~~~~w~~G 119 (320)
-...++|+|..+..|||.|+.||+|.|.. ...+-||+|
T Consensus 401 ~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg 439 (460)
T KOG3771|consen 401 YKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEG 439 (460)
T ss_pred cceeccccccccccccccccCCCEEEEecCCCccchhhH
Confidence 35689999999999999999999999766 345679999
No 79
>KOG4458|consensus
Probab=93.52 E-value=0.041 Score=42.51 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=29.4
Q ss_pred CceeEEEEecCceEecCCCchHHHHHHHHHHHhc
Q psy368 175 KRERFLLGYLGSVETSAHKGNAVICQAVHKIRQT 208 (320)
Q Consensus 175 ~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~ 208 (320)
.|..|.+||.||++++.+...--+..||++|+-.
T Consensus 32 hgi~feakyvgsldiprp~srieivaamrrir~~ 65 (78)
T KOG4458|consen 32 HGICFEAKYVGSLDIPRPGSRIEIVAAMRRIRVE 65 (78)
T ss_pred ccceEeeeeeeeecCCCCCCeeehhHhhhhheee
Confidence 5899999999999999998777778899988654
No 80
>KOG0199|consensus
Probab=92.90 E-value=0.11 Score=56.19 Aligned_cols=55 Identities=25% Similarity=0.259 Sum_probs=45.3
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeecc-CCceecccccccccccccccccCCCCcccceecccCCcccccccCC
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEA-EDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAY 158 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~-~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~y 158 (320)
....+|++|+++ ..|-|.|++||.|.|.++. .+.||.| -|.|+++.|.||.+-
T Consensus 375 qp~~a~~~~d~~--ep~aLh~~kgD~IvVIegs~a~y~Wfg------------------------Qn~Rn~kvG~Fprsv 428 (1039)
T KOG0199|consen 375 QPAVARETYDSI--EPGALHLTKGDEIVVIEGSGAGYDWFG------------------------QNKRNQKVGTFPRSV 428 (1039)
T ss_pred CCceeeeecccc--CCCceeeccCCeEEEEecCCccceeec------------------------cccccceecccCcce
Confidence 345577887776 5677999999999988774 4789999 789999999999986
Q ss_pred cc
Q psy368 159 AV 160 (320)
Q Consensus 159 v~ 160 (320)
|.
T Consensus 429 vt 430 (1039)
T KOG0199|consen 429 VT 430 (1039)
T ss_pred ee
Confidence 64
No 81
>KOG3725|consensus
Probab=92.37 E-value=0.13 Score=49.52 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=46.6
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEee--ccCCceecccccccccccccccccCCCCcccceecccCCcccccccCC
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSN--EAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAY 158 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~--~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~y 158 (320)
-+.+|+||+|..-...||.|...|+|.|+. +.+..|..|. |.+++|-+|-.|
T Consensus 317 trkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgE--------------------------rGnkkGKvPvtY 370 (375)
T KOG3725|consen 317 TRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGE--------------------------RGNKKGKVPVTY 370 (375)
T ss_pred ccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhh--------------------------hcCCCCCcchhH
Confidence 456899999999999999999999999876 6788999993 468889899888
Q ss_pred cc
Q psy368 159 AV 160 (320)
Q Consensus 159 v~ 160 (320)
.+
T Consensus 371 lE 372 (375)
T KOG3725|consen 371 LE 372 (375)
T ss_pred HH
Confidence 63
No 82
>KOG3557|consensus
Probab=91.83 E-value=0.16 Score=53.85 Aligned_cols=60 Identities=23% Similarity=0.365 Sum_probs=49.7
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
++...++|+|..|+..||...+||+++|..+... ||+- .| ..|+.|++|.|...
T Consensus 500 ~k~~~~~Ydf~arNs~ELsV~k~E~LEvl~d~R~-WW~~------------------------kn-~~G~~GyvP~nIL~ 553 (721)
T KOG3557|consen 500 KKWVLVLYDFQARNSSELSVKKGEVLEVLDDGRK-WWKV------------------------KN-GHGRAGYVPSNILA 553 (721)
T ss_pred ceeeeeehhhhcccchhhhhhhhhhhhhhhcccc-ceec------------------------cC-ccCCCCCcchhhhc
Confidence 4468899999999999999999999999987655 6665 23 36999999999888
Q ss_pred cccccc
Q psy368 161 DVEYED 166 (320)
Q Consensus 161 ~~~~~~ 166 (320)
.+..++
T Consensus 554 ~~~~~~ 559 (721)
T KOG3557|consen 554 PLQPEH 559 (721)
T ss_pred cCCCcc
Confidence 777654
No 83
>KOG0507|consensus
Probab=90.96 E-value=0.059 Score=58.06 Aligned_cols=85 Identities=8% Similarity=-0.220 Sum_probs=67.0
Q ss_pred cEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecC--CChHHHH
Q psy368 213 HSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLAS--ESTRPVA 290 (320)
Q Consensus 213 ~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~--~sA~~Ia 290 (320)
-++.+-+|.-|+.-.+..+|. ..+. ++.++|--++.+..+.+.|+++++... ..+||+|+.+ ..+..+.
T Consensus 758 ~~g~~a~s~~gv~~~~~d~k~-----~~~c--~~pe~i~e~~~~~~~l~~~a~~~~~~~--l~~~~~~~vd~~g~~~~~i 828 (854)
T KOG0507|consen 758 DRGSKALSVTGVEDEFRDHKS-----LLVC--KQPETIIEWLESDVMLAPVAADSVGAL--LQTHGYDRVDQKGIINRSI 828 (854)
T ss_pred cccccccccccCCCCCCCccc-----ceee--cChhhhcccccchhhhhhhhhhhhhcc--hhhccccccccchhHHHHH
Confidence 445566777888887777763 2222 679999988888889999999998765 4689999885 6678999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy368 291 EAVGRAFQRFYEKFIE 306 (320)
Q Consensus 291 ~AIG~AFqvayq~~l~ 306 (320)
.++|+||++|||.-+.
T Consensus 829 ~t~g~af~~a~~~~~~ 844 (854)
T KOG0507|consen 829 LTEGTAFKIASEIEKL 844 (854)
T ss_pred HhhhhhhhhHHHHHhh
Confidence 9999999999997554
No 84
>KOG3565|consensus
Probab=90.70 E-value=0.41 Score=51.22 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=49.1
Q ss_pred ccceEEeccCCCCCCCcccccCCCeEEEeec-cCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 81 EATHRSLHKFIPRHFDEVELEIGDPIYVSNE-AEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 81 ~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~-~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
-.++.++|.|.+++++++.+..|+++.+.+. ..++|-+|+. -..|..|.||..|+
T Consensus 578 ~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~------------------------~~~~~~g~~Ptsyl 633 (640)
T KOG3565|consen 578 IRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRL------------------------EPNGEKGYVPTSYL 633 (640)
T ss_pred ccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCC------------------------CCCCcCCCCCcccc
Confidence 4578899999999999999999999997665 5789999941 12599999999998
Q ss_pred cccc
Q psy368 160 VDVE 163 (320)
Q Consensus 160 ~~~~ 163 (320)
..++
T Consensus 634 ~~~~ 637 (640)
T KOG3565|consen 634 DVTE 637 (640)
T ss_pred cccc
Confidence 6554
No 85
>KOG0609|consensus
Probab=90.01 E-value=0.21 Score=52.10 Aligned_cols=40 Identities=18% Similarity=0.408 Sum_probs=34.3
Q ss_pred cceEEeccCCCCCCCc-------ccccCCCeEEEeeccCCceecccc
Q psy368 82 ATHRSLHKFIPRHFDE-------VELEIGDPIYVSNEAEDLWCEGKA 121 (320)
Q Consensus 82 ~~~r~~~~f~p~~~~e-------l~l~~gd~i~v~~~~~~~w~~G~~ 121 (320)
...||+|+|.|...+- |.+..|||+.|..+.|.+||.++.
T Consensus 215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~ 261 (542)
T KOG0609|consen 215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARR 261 (542)
T ss_pred eeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhc
Confidence 4579999998887664 678999999999999999999953
No 86
>KOG3601|consensus
Probab=86.08 E-value=0.26 Score=45.98 Aligned_cols=50 Identities=22% Similarity=0.415 Sum_probs=41.8
Q ss_pred eEEeccCCCCCCCcccccCCCeEEEeeccCC-ceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 84 HRSLHKFIPRHFDEVELEIGDPIYVSNEAED-LWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 84 ~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~-~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
..++|+|+..-.|||.+.+||.|.+.+..++ +|+.-. ..|..|..|.||.
T Consensus 3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ae--------------------------l~g~~g~~P~Nai 53 (222)
T KOG3601|consen 3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAE--------------------------LDGPEGFIPKNAI 53 (222)
T ss_pred hhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHh--------------------------hcCccccCccccc
Confidence 3578999999999999999999998876554 898872 2588888899986
No 87
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain. These domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on a Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via `bridged' water molecules are coordinated by residues an Asn and a Ser residue []. The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6 [].; GO: 0005158 insulin receptor binding; PDB: 1XR0_B 1QQG_B 1IRS_A 2V76_D 1MK7_B 2K00_A 1MIZ_B 1MK9_B 1MIX_A 2H7E_A ....
Probab=83.26 E-value=23 Score=28.76 Aligned_cols=74 Identities=15% Similarity=0.215 Sum_probs=57.5
Q ss_pred CcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCC---CCceeeEEEEecCCChHH
Q psy368 212 PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHP---NMQRFACHVFLASESTRP 288 (320)
Q Consensus 212 p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~---~~~rf~CHVF~c~~sA~~ 288 (320)
.-+..|.|+...|.+.+..++. .... .||..|.=||.| ...|.|-+... ..+. ++|.+.+ |+.
T Consensus 21 ~g~~~L~l~~~~l~L~~~~~~~-----~~~~--Wpl~~lRryG~~---~~~F~fEaGRrc~tG~G~---f~f~t~~-a~~ 86 (100)
T PF02174_consen 21 SGPYLLCLTPDELILIDPQSGE-----PILE--WPLRYLRRYGRD---DGIFSFEAGRRCPTGEGL---FWFQTPD-AEE 86 (100)
T ss_dssp EEEEEEEEESSEEEEEETTTTE-----EEEE--EEGGGEEEEEEE---TTEEEEEESTTSTTCSEE---EEEEEST-HHH
T ss_pred eEEEEEEECCCEEEEecCCCCc-----eEEE--EEhHHhhhhccC---CCEEEEEECCcCCCCCcE---EEEEeCC-HHH
Confidence 3678999999999998888763 3333 899999999875 78999998642 2233 4788877 999
Q ss_pred HHHHHHHHHHH
Q psy368 289 VAEAVGRAFQR 299 (320)
Q Consensus 289 Ia~AIG~AFqv 299 (320)
|.++|..|.+.
T Consensus 87 I~~~v~~~i~~ 97 (100)
T PF02174_consen 87 IFETVERAIKA 97 (100)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 88
>KOG4436|consensus
Probab=74.93 E-value=1.5 Score=47.99 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=45.5
Q ss_pred cceeEEEEecCCCCceeEEEeeCCCCce---eeEEEEecC--CChHHHHHHHHHHHHHH
Q psy368 247 LKNVMFCGFHPREPCYLGFISKHPNMQR---FACHVFLAS--ESTRPVAEAVGRAFQRF 300 (320)
Q Consensus 247 L~~ISFca~Dp~d~r~FaFIak~~~~~r---f~CHVF~c~--~sA~~Ia~AIG~AFqva 300 (320)
-++||+|.....+...||||++....+. +.|+||.|. ..-.++.-++-+||..+
T Consensus 95 ~~~is~eSq~~~~~~~~g~~sr~~sg~s~~~~v~~v~~~~n~s~~DE~m~Tl~~a~s~~ 153 (948)
T KOG4436|consen 95 FKNISGESQSISHVSHFGFISRESSGNSQLEAVCYVFQCQNESLVDEDMWTLWGAFSAA 153 (948)
T ss_pred hhhccchhhhhhhhhhcCcccccCCCCCcccceeeeeccCCCcchhhhHHHHHHHHhhh
Confidence 3579999999999999999999865555 999999995 44578899999999873
No 89
>cd00824 PTBI IRS-like phosphotyrosine-binding domain. IRS-like phosphotyrosine-binding domain (PTBi); This domain has a PH-like fold and is found in insulin receptor substrate molecules and in other eukaryotic signaling molecules such as FRS2 and Dok. IRS and Dok molecules have an N-terminal PH domain, which is followed by an IRS-like PTB domain. FRS2 just has an N-terminal PTBi domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=73.98 E-value=39 Score=28.16 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=56.9
Q ss_pred CcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCC---CCceeeEEEEecCCChHH
Q psy368 212 PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHP---NMQRFACHVFLASESTRP 288 (320)
Q Consensus 212 p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~---~~~rf~CHVF~c~~sA~~ 288 (320)
.-...|.++.+.|.+.+..+.. .... .|+..|.=||.| ..+|.|=+... ..+. +.|.+.. +..
T Consensus 20 ~G~y~L~lt~~~l~L~~~~~~~-----~~~~--wpl~~lRRyG~~---~~~FsfEaGRrc~tG~G~---f~f~t~~-~~~ 85 (104)
T cd00824 20 LGSYRLCLTSKELTLVKLGSRV-----ALVV--WPLMFLRRYGYD---SNLFSFEAGRRCVTGEGI---FTFQTDR-AEE 85 (104)
T ss_pred ceeEEEEECCCEEEEEecCCCc-----eEEE--eehHHeeecccC---CCEEEEEccCcCCCCCCE---EEEEcCC-HHH
Confidence 4678999999999999988642 3333 789999999977 48999987542 1233 5677764 888
Q ss_pred HHHHHHHHHHHHHH
Q psy368 289 VAEAVGRAFQRFYE 302 (320)
Q Consensus 289 Ia~AIG~AFqvayq 302 (320)
|.+.|..|++.+-.
T Consensus 86 I~~~v~~~i~~~~~ 99 (104)
T cd00824 86 IFQNVHETILAAMK 99 (104)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999888876543
No 90
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like).
Probab=68.82 E-value=48 Score=27.42 Aligned_cols=74 Identities=15% Similarity=0.107 Sum_probs=53.9
Q ss_pred CcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCC---CCceeeEEEEecCCChHH
Q psy368 212 PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHP---NMQRFACHVFLASESTRP 288 (320)
Q Consensus 212 p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~---~~~rf~CHVF~c~~sA~~ 288 (320)
.-.+.|.++.+.|.+.+..++. ..+. .|+..|.=||. |..+|.|=+... ..+. ..|.|. .|+.
T Consensus 19 ~G~y~L~lt~~~L~L~~~~~~~-----~~~~--wpl~~lRRyG~---~~~~FsfEaGRrc~tG~G~---f~f~t~-~a~~ 84 (98)
T smart00310 19 SGSYRLRLTSETLVLWRLNPRV-----ELVV--WPLLSLRRYGR---DKNFFFFEAGRRCVSGPGE---FTFQTV-VAQE 84 (98)
T ss_pred CeeEEEEECCcEEEEEecCCCc-----cEEE--eehhHeeeecC---CCCEEEEEccCcCCCCCCE---EEEEcC-cHHH
Confidence 4579999999999999966552 3333 78999999986 578999987542 1233 345554 4899
Q ss_pred HHHHHHHHHHH
Q psy368 289 VAEAVGRAFQR 299 (320)
Q Consensus 289 Ia~AIG~AFqv 299 (320)
|-++|..|.+.
T Consensus 85 i~~~v~~a~~~ 95 (98)
T smart00310 85 IFQLVLEAMQA 95 (98)
T ss_pred HHHHHHHHHHH
Confidence 99999888753
No 91
>KOG3416|consensus
Probab=57.81 E-value=5.6 Score=34.56 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=27.0
Q ss_pred cccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccc
Q psy368 99 ELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGI 153 (320)
Q Consensus 99 ~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~Gi 153 (320)
.+++||+|.+..+....|-.| ..|++|+.|.
T Consensus 61 ~~~PGDIirLt~Gy~Si~qg~------------------------LtL~~GK~Ge 91 (134)
T KOG3416|consen 61 LIQPGDIIRLTGGYASIFQGC------------------------LTLYVGKGGE 91 (134)
T ss_pred ccCCccEEEecccchhhhcCc------------------------eEEEecCCce
Confidence 579999999999999988877 6788898885
No 92
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. This domain has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules The DOK family of eukaryotic signaling molecules have an N-terminal PH domain, followed by an IRS-like PTB domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=57.33 E-value=75 Score=26.71 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=54.1
Q ss_pred CcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCC---CCceeeEEEEecCCChHH
Q psy368 212 PHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHP---NMQRFACHVFLASESTRP 288 (320)
Q Consensus 212 p~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~---~~~rf~CHVF~c~~sA~~ 288 (320)
.-.+.|.|....|.+.|..+.. .+.. -|++.|.=-+. |...|+|-+... ..+. +.|.|.+ |+.
T Consensus 20 ~G~y~L~v~~~~l~L~d~~~~~-----~l~~--WP~~~LRryG~---d~~~FsFEAGRrC~tGeG~---f~F~t~~-~~~ 85 (104)
T cd01203 20 PGSYMLRMGPTELQLKSEDLGA-----TLYM--WPYRFLRKYGR---DKGKFSFEAGRRCTSGEGV---FTFDTTQ-GNE 85 (104)
T ss_pred ceeEEEEEcCCEEEEEcCCCCc-----EEEE--eehHhhhhhcc---cCCEEEEEecCcCCCCCcE---EEEecCC-HHH
Confidence 4779999999999999988652 2222 67766665554 589999998652 1222 6788875 899
Q ss_pred HHHHHHHHHHH
Q psy368 289 VAEAVGRAFQR 299 (320)
Q Consensus 289 Ia~AIG~AFqv 299 (320)
|-+.|..|.+.
T Consensus 86 if~~v~~~i~~ 96 (104)
T cd01203 86 IFRAVEAAIKS 96 (104)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 93
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=53.35 E-value=12 Score=27.15 Aligned_cols=23 Identities=30% Similarity=0.569 Sum_probs=19.7
Q ss_pred cccCCCeEEEeeccCCceecccc
Q psy368 99 ELEIGDPIYVSNEAEDLWCEGKA 121 (320)
Q Consensus 99 ~l~~gd~i~v~~~~~~~w~~G~~ 121 (320)
.+.+||.|.+.-..++.||+|..
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V 24 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVV 24 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEE
Confidence 46899999998877999999953
No 94
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=44.23 E-value=22 Score=28.22 Aligned_cols=24 Identities=25% Similarity=0.612 Sum_probs=18.9
Q ss_pred ccccCCCeEEEeecc------CCceecccc
Q psy368 98 VELEIGDPIYVSNEA------EDLWCEGKA 121 (320)
Q Consensus 98 l~l~~gd~i~v~~~~------~~~w~~G~~ 121 (320)
|.++.||.|.|.... ++.||-|+.
T Consensus 4 L~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 4 LSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred cccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 567999999997765 568998853
No 95
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria. PK activity has been sporadically reported in other microorganisms including eukaryotic yeasts. Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase is a thiamine diphosphate (ThdP)-dependent enzyme found in bacteria such as Bifidobacterium sp [, ]. This enzyme has dual-specificity with the following catalytic activities: 4.1.2.9 from EC: xylose 5-P + Pi = acetyl-P + glyeraldehyde-3-P 4.1.2.22 from EC: fructose-6-P + Pi = acetyl-P + erythrose-4-P Phosphoketolases are distantly related to transketolases, e.g. IPR005475 from INTERPRO.; GO: 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3AI7_B 3AHC_A 3AHJ_A 3AHG_A 3AHE_A 3AHI_A 3AHD_A 3AHF_A 3AHH_A.
Probab=41.63 E-value=4.2 Score=37.12 Aligned_cols=53 Identities=34% Similarity=0.488 Sum_probs=28.8
Q ss_pred cccceEE-eccCCCCCCCcccccCCCeEEEe-eccCCceecccccccccccccccccCCCCcccceecccCCcccccccC
Q psy368 80 LEATHRS-LHKFIPRHFDEVELEIGDPIYVS-NEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSA 157 (320)
Q Consensus 80 ~~~~~r~-~~~f~p~~~~el~l~~gd~i~v~-~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~ 157 (320)
++.+-|. +.+..+...|+..-.-|-|+.+. +....+|.+| ..| ||+.|+|++-
T Consensus 36 ~e~t~r~w~~~~~~~~~~~~~~~~G~V~e~LSEh~c~G~leG------------------------Y~L-tGrhglf~sY 90 (179)
T PF03894_consen 36 FEVTNRQWMARILPPDDDEHLAPGGRVMEVLSEHQCQGWLEG------------------------YLL-TGRHGLFASY 90 (179)
T ss_dssp GGT--EE--S----TTT-TTEESS-SEEE-S-HHHHHHHHHH------------------------HHH-TT-EEEEEEE
T ss_pred HHhcccccccccCCCcchhhcccCCeeeeecCHHHHHHHHHH------------------------HHh-cCCccccccc
Confidence 4445443 34555655555555567777754 4577899999 655 8999999874
No 96
>KOG4384|consensus
Probab=34.10 E-value=1.3e+02 Score=30.48 Aligned_cols=58 Identities=21% Similarity=0.258 Sum_probs=43.3
Q ss_pred ceEEeccCC--CCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCcc
Q psy368 83 THRSLHKFI--PRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYAV 160 (320)
Q Consensus 83 ~~r~~~~f~--p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv~ 160 (320)
.+|+.-+|. |...|||.+..||+|-+..+..=+-|.|- . .++.|-|+--|+.
T Consensus 138 ~~~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~-----------------------~---~~kv~~f~~~~v~ 191 (361)
T KOG4384|consen 138 RARVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGL-----------------------L---NNKVGSFKFIYVD 191 (361)
T ss_pred cccccccCCCCcccccchhhcccchhhccccCcccccccc-----------------------c---cCcccccccceec
Confidence 456666666 56788999999999999998776666662 2 4888889999986
Q ss_pred cccccc
Q psy368 161 DVEYED 166 (320)
Q Consensus 161 ~~~~~~ 166 (320)
.+.-++
T Consensus 192 ~~s~e~ 197 (361)
T KOG4384|consen 192 VISEEE 197 (361)
T ss_pred cccccc
Confidence 665444
No 97
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=33.29 E-value=41 Score=23.93 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=15.9
Q ss_pred ccCCCeEEEeeccCCceecc
Q psy368 100 LEIGDPIYVSNEAEDLWCEG 119 (320)
Q Consensus 100 l~~gd~i~v~~~~~~~w~~G 119 (320)
|..|+.|.+.....++|+.=
T Consensus 27 l~~g~~v~i~~~~~~~W~~v 46 (63)
T smart00287 27 LKKGDKVKVLGVDGQDWAKI 46 (63)
T ss_pred ecCCCEEEEEEccCCceEEE
Confidence 57889999888766589886
No 98
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=29.17 E-value=38 Score=23.63 Aligned_cols=35 Identities=29% Similarity=0.505 Sum_probs=25.8
Q ss_pred ccCCCeEEEeeccCCc-eecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 100 LEIGDPIYVSNEAEDL-WCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 100 l~~gd~i~v~~~~~~~-w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
|..|+.|.|.....+. |++=+ ...|..|++++.|+
T Consensus 19 l~~g~~v~v~~~~~~~~W~~V~-------------------------~~~g~~GwV~~~~l 54 (55)
T PF08239_consen 19 LPKGEKVTVLGESGDGNWYKVR-------------------------TYDGKTGWVSSSYL 54 (55)
T ss_dssp EETTSEEEEEEEETT--EEEEE-------------------------EETTEEEEEEGGCE
T ss_pred EeCCCEEEEEEEcCCcEEEEEE-------------------------CcCCcEEEEEcccc
Confidence 5788999988877665 98762 23588899888875
No 99
>PF11717 Tudor-knot: RNA binding activity-knot of a chromodomain ; PDB: 2EKO_A 2RO0_A 2RNZ_A 1WGS_A 3E9G_A 3E9F_A 2K3X_A 2K3Y_A 2EFI_A 2F5K_F ....
Probab=24.17 E-value=98 Score=22.33 Aligned_cols=21 Identities=24% Similarity=0.639 Sum_probs=15.6
Q ss_pred ccCCCeEEEeeccCCceecccc
Q psy368 100 LEIGDPIYVSNEAEDLWCEGKA 121 (320)
Q Consensus 100 l~~gd~i~v~~~~~~~w~~G~~ 121 (320)
|++|+.+++.. .++.|++++.
T Consensus 1 ~~vG~~v~~~~-~~~~~y~A~I 21 (55)
T PF11717_consen 1 FEVGEKVLCKY-KDGQWYEAKI 21 (55)
T ss_dssp --TTEEEEEEE-TTTEEEEEEE
T ss_pred CCcCCEEEEEE-CCCcEEEEEE
Confidence 57899999887 6788999854
No 100
>KOG3536|consensus
Probab=23.40 E-value=10 Score=37.36 Aligned_cols=116 Identities=12% Similarity=0.058 Sum_probs=83.4
Q ss_pred CCceeEEEEecCceEecCCCchHHHHHHHHHHHhcC-----CCCcEE--EEEEeCCceEEEeCCCCCccceeeeeccccc
Q psy368 174 PKRERFLLGYLGSVETSAHKGNAVICQAVHKIRQTQ-----HRPHSC--ILEVSDEGLRMVEKSRPGQHRKVRGLDYFYS 246 (320)
Q Consensus 174 ~~~~~F~VKYLGSVeV~~~kG~~Vv~eAV~kI~~~~-----~kp~~V--~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~p 246 (320)
....-|.+.++|+++|...--..++..|++.....+ .+.++. +|.+.....||.|..|.. .-.. |+
T Consensus 96 Isi~gviI~~~~T~~v~~~~~l~rIs~caddk~~kR~fsfIar~~es~~hlc~~f~s~Kla~~iTlt-----igqa--Fd 168 (321)
T KOG3536|consen 96 ISIQGVIIRDLGTMAVKHNFPLYRISYCADDKLAKRAFSFIARMTESQSHLCVAFDSLKLADDITLT-----IGQA--FD 168 (321)
T ss_pred eccceeEEeecccccceecCChhhhhHhHhHHHHHHHHHHHHHhcccCCceEEEeehhhhcchHHHH-----HHhh--cc
Confidence 456789999999999999888888888888776664 244444 888888888899998852 2223 78
Q ss_pred cceeEEEEecCC-CCceeEEEeeC-CCC------ceeeEEEEecCCChHH-HHHHHHHH
Q psy368 247 LKNVMFCGFHPR-EPCYLGFISKH-PNM------QRFACHVFLASESTRP-VAEAVGRA 296 (320)
Q Consensus 247 L~~ISFca~Dp~-d~r~FaFIak~-~~~------~rf~CHVF~c~~sA~~-Ia~AIG~A 296 (320)
|-.+-|-..+.. ++|++||.-+- ... -.-.|.+|........ |+.++..+
T Consensus 169 Lay~~~~~s~~e~~Kri~glq~rv~~~~~r~e~~l~~~~~~~~~N~lg~k~i~~ap~~~ 227 (321)
T KOG3536|consen 169 LAYVKFLDSHEEKQKRIKGLQKRVDVLGARQEETLPKNSLIAESNNLGEKEICKAPPLG 227 (321)
T ss_pred hhhHHHHhhcchHHHHHHHHHhhhhhhhhhhhcccchhhHHhhhcccCccchhcCCCcc
Confidence 888888887777 89999988665 221 2345788877644444 66666544
No 101
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=22.73 E-value=5.6e+02 Score=22.96 Aligned_cols=83 Identities=12% Similarity=0.200 Sum_probs=51.9
Q ss_pred CCCcEEEEEEeCCceEEEeCCCCCccceeeeeccccccceeEEEEecCCCCceeEEEeeCCCCceeeEEEEecCCChHHH
Q psy368 210 HRPHSCILEVSDEGLRMVEKSRPGQHRKVRGLDYFYSLKNVMFCGFHPREPCYLGFISKHPNMQRFACHVFLASESTRPV 289 (320)
Q Consensus 210 ~kp~~V~L~VS~~GIrVvD~~tk~~~~~~~~~~~f~pL~~ISFca~Dp~d~r~FaFIak~~~~~rf~CHVF~c~~sA~~I 289 (320)
.|+++-.|.|+...|-+++....... ....+.+-.||..|+-.+.-+-...+|..-..... -.+|.|... .++
T Consensus 63 ~K~~~R~livT~~~iY~l~~~~~~~~-~~~~~kr~i~l~~I~~IsvS~~~D~~~vihv~~~~-----D~il~~~~k-~El 135 (199)
T PF06017_consen 63 NKPQPRILIVTDKAIYLLDQRKVKDP-KKYKLKRRIPLSDITGISVSPLSDNFFVIHVPGEG-----DLILESDFK-TEL 135 (199)
T ss_pred CCccceEEEEeCCeEEEEEEeecCCc-eeeEEEeccCcccccEEEEccCCCCEEEEEECCCC-----CEEEEeCcH-HHH
Confidence 56788899999999999974321100 01111233789999988888777777766663332 255666532 556
Q ss_pred HHHHHHHHHH
Q psy368 290 AEAVGRAFQR 299 (320)
Q Consensus 290 a~AIG~AFqv 299 (320)
+..|-++++.
T Consensus 136 v~~L~~~~~~ 145 (199)
T PF06017_consen 136 VTILCKAYKK 145 (199)
T ss_pred HHHHHHHHHH
Confidence 6666655554
No 102
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=21.38 E-value=30 Score=30.98 Aligned_cols=38 Identities=21% Similarity=0.354 Sum_probs=31.3
Q ss_pred CCCeEE--EeeccCCceeccccccccc-ccccccccCCCCc
Q psy368 102 IGDPIY--VSNEAEDLWCEGKAKESTY-VPVVKASSRLPTP 139 (320)
Q Consensus 102 ~gd~i~--v~~~~~~~w~~G~~~~~~~-~~~~~~~sr~~~~ 139 (320)
+.+++| .+.++.+..++..+.++|+ +|+++|++|++.+
T Consensus 2 ~~Gv~f~a~YlG~t~~~~~~~~~~~tR~~~a~Eai~rik~~ 42 (156)
T cd01208 2 IEGVLFRARYLGSTQLLCEKTPSKNVRMXQAQEAVSRIKAP 42 (156)
T ss_pred cCceEEEEEeeceeeeeecCCCChhhhHHHHHHHHHHHhcc
Confidence 345778 4667889999999999999 7889999998853
No 103
>KOG0040|consensus
Probab=21.33 E-value=7.9 Score=45.47 Aligned_cols=60 Identities=25% Similarity=0.381 Sum_probs=50.1
Q ss_pred cccceEEeccCCCCCCCcccccCCCeEEEeeccCCceecccccccccccccccccCCCCcccceecccCCcccccccCCc
Q psy368 80 LEATHRSLHKFIPRHFDEVELEIGDPIYVSNEAEDLWCEGKAKESTYVPVVKASSRLPTPWMLRVNLRTGRQGIFPSAYA 159 (320)
Q Consensus 80 ~~~~~r~~~~f~p~~~~el~l~~gd~i~v~~~~~~~w~~G~~~~~~~~~~~~~~sr~~~~~~~~~nlrtg~~GifP~~yv 159 (320)
.....-+||+|.-.++.|+...+||++...+-..-.||.-+ +| -+.|+.|..|+
T Consensus 967 g~~~v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve-----------------------~~---d~qg~vpa~yv 1020 (2399)
T KOG0040|consen 967 GKECVLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVE-----------------------VN---DRQGFVPAAYV 1020 (2399)
T ss_pred HHHHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccch-----------------------hh---hhcCcchHHHH
Confidence 44456789999999999999999999999888888899984 45 45677999999
Q ss_pred cccccc
Q psy368 160 VDVEYE 165 (320)
Q Consensus 160 ~~~~~~ 165 (320)
..+.+.
T Consensus 1021 k~~~~~ 1026 (2399)
T KOG0040|consen 1021 KRLDPG 1026 (2399)
T ss_pred HHhccC
Confidence 877765
Done!