Query psy3682
Match_columns 218
No_of_seqs 153 out of 1815
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 22:54:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 8E-24 2.7E-28 186.3 7.0 86 44-129 401-491 (510)
2 2rh1_A Beta-2-adrenergic recep 99.9 3.2E-21 1.1E-25 169.1 13.5 78 46-127 402-479 (500)
3 3eml_A Human adenosine A2A rec 99.8 6.5E-21 2.2E-25 165.2 12.7 86 44-130 387-472 (488)
4 4eiy_A Adenosine receptor A2A/ 99.8 1.1E-20 3.9E-25 162.1 12.6 86 44-130 346-431 (447)
5 3vw7_A Proteinase-activated re 99.8 2E-21 6.7E-26 168.6 7.3 88 43-130 381-470 (484)
6 3v2y_A Sphingosine 1-phosphate 99.8 2.6E-20 9E-25 164.1 11.7 83 46-129 415-497 (520)
7 4dkl_A MU-type opioid receptor 99.8 2.7E-20 9.2E-25 160.3 11.1 82 44-125 375-456 (464)
8 3pbl_A D(3) dopamine receptor, 99.8 4.6E-20 1.6E-24 159.9 12.2 80 46-127 395-474 (481)
9 2ks9_A Substance-P receptor; w 99.8 2.9E-19 9.8E-24 149.7 16.6 112 15-126 207-323 (364)
10 3uon_A Human M2 muscarinic ace 99.8 4E-20 1.4E-24 159.6 11.6 83 45-130 381-463 (467)
11 1u19_A Rhodopsin; G protein-co 99.8 9.9E-20 3.4E-24 151.3 12.3 110 15-126 215-325 (349)
12 3rze_A Histamine H1 receptor, 99.8 8.5E-20 2.9E-24 156.9 10.4 82 45-129 366-447 (452)
13 4ea3_A Fusion protein of nocic 99.8 1E-19 3.5E-24 156.6 10.6 114 15-128 300-413 (434)
14 2lnl_A C-X-C chemokine recepto 99.8 1.8E-19 6E-24 147.3 9.8 104 15-126 185-295 (296)
15 4amj_A Beta-1 adrenergic recep 99.8 1.3E-18 4.5E-23 142.2 12.9 109 15-127 188-303 (315)
16 2z73_A Rhodopsin; visual pigme 99.8 8.5E-19 2.9E-23 151.2 11.5 109 15-125 211-332 (448)
17 3odu_A C-X-C chemokine recepto 99.8 1.4E-19 4.6E-24 157.7 6.1 84 44-127 405-495 (502)
18 3sn6_R Lysozyme, beta-2 adrene 99.8 1.7E-18 5.7E-23 152.2 11.7 110 14-127 358-493 (514)
19 2koe_A Human cannabinoid recep 99.1 3E-11 1E-15 69.0 1.8 37 89-125 2-38 (40)
20 2ki9_A Cannabinoid receptor 2; 98.7 5E-10 1.7E-14 61.0 -2.4 30 47-76 1-30 (33)
21 4ea3_A Fusion protein of nocic 90.7 2.6 8.9E-05 35.2 11.0 100 30-130 312-411 (434)
22 4eiy_A Adenosine receptor A2A/ 87.0 4.4 0.00015 33.5 9.8 39 92-130 389-427 (447)
23 2z73_A Rhodopsin; visual pigme 84.3 2 6.7E-05 36.0 6.3 30 97-126 308-337 (448)
24 3eml_A Human adenosine A2A rec 71.9 11 0.00037 31.4 7.2 80 49-130 389-468 (488)
25 1u19_A Rhodopsin; G protein-co 67.4 19 0.00066 28.3 7.5 38 92-129 287-324 (349)
26 2ks9_A Substance-P receptor; w 44.6 1.1E+02 0.0038 23.9 11.9 37 94-130 287-323 (364)
27 3sn6_R Lysozyme, beta-2 adrene 43.4 76 0.0026 26.7 7.6 37 92-129 455-491 (514)
28 2ket_A Cathelicidin-6; antimic 41.1 17 0.00057 17.2 1.6 13 113-125 4-16 (27)
29 3noh_A Putative peptide bindin 32.2 22 0.00076 24.4 1.8 24 102-125 26-49 (139)
30 4amj_A Beta-1 adrenergic recep 26.9 1.3E+02 0.0043 22.8 5.8 36 93-129 266-301 (315)
31 3rze_A Histamine H1 receptor, 25.2 1.3E+02 0.0044 24.3 5.9 21 14-34 181-201 (452)
32 1btq_A BAND 3 anion transport 22.9 42 0.0014 16.3 1.4 18 53-70 2-19 (26)
33 3uon_A Human M2 muscarinic ace 22.2 72 0.0025 26.1 3.7 75 51-129 384-458 (467)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.89 E-value=8e-24 Score=186.26 Aligned_cols=86 Identities=26% Similarity=0.525 Sum_probs=63.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc-----ccchhHHHHHHHHHHhhcccchhhHHhccHHHHHH
Q psy3682 44 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-----TIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAA 118 (218)
Q Consensus 44 ~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~-----~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~ 118 (218)
.++++|++||+++|+++|++||+||+++.++..+.+.... .....++.++.+|+|+|||+||+||+++|++||++
T Consensus 401 ~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~a 480 (510)
T 4grv_A 401 VQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV 480 (510)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3568899999999999999999999999999888655211 12234566889999999999999999999999999
Q ss_pred HHHHhccccCC
Q psy3682 119 FIRLLKCKCGQ 129 (218)
Q Consensus 119 ~~~~~~~~~~~ 129 (218)
|+++++|+|.+
T Consensus 481 Fk~iL~C~C~~ 491 (510)
T 4grv_A 481 FLSTLACLCPG 491 (510)
T ss_dssp -----------
T ss_pred HHHHHhhcCCC
Confidence 99999886654
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.86 E-value=3.2e-21 Score=169.07 Aligned_cols=78 Identities=41% Similarity=0.773 Sum_probs=69.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcc
Q psy3682 46 TEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 46 ~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
+|+|++|++++|+++|++||+||+++.++..+... ..+..++.++.+|+++||++||+||++ +++||++|+++++|
T Consensus 402 ~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~---~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~ 477 (500)
T 2rh1_A 402 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL 477 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhh
Confidence 68899999999999999999999999999988643 456778889999999999999999996 99999999999976
Q ss_pred cc
Q psy3682 126 KC 127 (218)
Q Consensus 126 ~~ 127 (218)
++
T Consensus 478 ~~ 479 (500)
T 2rh1_A 478 RR 479 (500)
T ss_dssp --
T ss_pred hc
Confidence 43
No 3
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.85 E-value=6.5e-21 Score=165.23 Aligned_cols=86 Identities=27% Similarity=0.541 Sum_probs=76.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHh
Q psy3682 44 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 123 (218)
Q Consensus 44 ~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~ 123 (218)
.++++|++||+++++++|++||+||+++.++..+.... ......+..++.+|+++||++||+||++++++||+++++++
T Consensus 387 ~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~ 465 (488)
T 3eml_A 387 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 465 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc-ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHH
Confidence 45789999999999999999999999999999887542 34566778899999999999999999999999999999999
Q ss_pred ccccCCC
Q psy3682 124 KCKCGQV 130 (218)
Q Consensus 124 ~~~~~~~ 130 (218)
+|.+.+.
T Consensus 466 ~~~~~~~ 472 (488)
T 3eml_A 466 RSHVLRQ 472 (488)
T ss_dssp HHTTSCC
T ss_pred hhccccc
Confidence 8766554
No 4
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.84 E-value=1.1e-20 Score=162.11 Aligned_cols=86 Identities=27% Similarity=0.541 Sum_probs=73.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHh
Q psy3682 44 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 123 (218)
Q Consensus 44 ~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~ 123 (218)
.++++|++|++++++++|++||+||+++.++..+.... ......+..++.+|+++||++||+||++++++||+++++++
T Consensus 346 ~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 424 (447)
T 4eiy_A 346 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 424 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcc-cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHH
Confidence 46789999999999999999999999999998886542 23456678899999999999999999999999999999999
Q ss_pred ccccCCC
Q psy3682 124 KCKCGQV 130 (218)
Q Consensus 124 ~~~~~~~ 130 (218)
++.+++.
T Consensus 425 ~~~~~r~ 431 (447)
T 4eiy_A 425 RSHVLRQ 431 (447)
T ss_dssp HHTC---
T ss_pred HHHHhcc
Confidence 8765554
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=168.64 Aligned_cols=88 Identities=18% Similarity=0.294 Sum_probs=61.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHH
Q psy3682 43 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG--YCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI 120 (218)
Q Consensus 43 ~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~--~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~ 120 (218)
+.++++|++||+++|+++|++||+||+++.++..+.... .......+..++.+|+++||++||+||++++++||++++
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~ 460 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY 460 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence 345678999999999999999999999999998765331 123344666799999999999999999999999999999
Q ss_pred HHhccccCCC
Q psy3682 121 RLLKCKCGQV 130 (218)
Q Consensus 121 ~~~~~~~~~~ 130 (218)
++++|++.+.
T Consensus 461 ~ll~~~~~~~ 470 (484)
T 3vw7_A 461 SILCCKESSD 470 (484)
T ss_dssp ----------
T ss_pred HHHhhccCCC
Confidence 9998765543
No 6
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.83 E-value=2.6e-20 Score=164.12 Aligned_cols=83 Identities=33% Similarity=0.505 Sum_probs=69.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcc
Q psy3682 46 TEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 46 ~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
+++|++||+++++++|++||+||+++.++..+...... .......++.+++++|||+||+||++++++||+++++++++
T Consensus 415 ~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~-~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~ 493 (520)
T 3v2y_A 415 ENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTC-DILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGR 493 (520)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTC-STTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-cHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 58899999999999999999999999999887654221 23444557788999999999999999999999999999977
Q ss_pred ccCC
Q psy3682 126 KCGQ 129 (218)
Q Consensus 126 ~~~~ 129 (218)
.+..
T Consensus 494 ~~~~ 497 (520)
T 3v2y_A 494 PLEV 497 (520)
T ss_dssp CC--
T ss_pred hccc
Confidence 5544
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.82 E-value=2.7e-20 Score=160.34 Aligned_cols=82 Identities=24% Similarity=0.533 Sum_probs=70.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHh
Q psy3682 44 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 123 (218)
Q Consensus 44 ~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~ 123 (218)
.++++|++||+++++++|++||+||+++.++..+...........+..++.+|+++||++||+||++++++||+++++++
T Consensus 375 ~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc 454 (464)
T 4dkl_A 375 DRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFC 454 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHh
Confidence 35678999999999999999999999999999887553344556667789999999999999999999999999999985
Q ss_pred cc
Q psy3682 124 KC 125 (218)
Q Consensus 124 ~~ 125 (218)
++
T Consensus 455 ~~ 456 (464)
T 4dkl_A 455 IP 456 (464)
T ss_dssp C-
T ss_pred cc
Confidence 44
No 8
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.82 E-value=4.6e-20 Score=159.87 Aligned_cols=80 Identities=44% Similarity=0.970 Sum_probs=71.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcc
Q psy3682 46 TEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 46 ~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
+++|++||+++++++|++||+||+++.++..+... ......+..++.+|+++||++||+||++++++||++++++++|
T Consensus 395 ~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~--~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 472 (481)
T 3pbl_A 395 REKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQT--CHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC 472 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
T ss_pred hhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc--ccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhc
Confidence 58999999999999999999999999998887654 4567788889999999999999999999999999999999986
Q ss_pred cc
Q psy3682 126 KC 127 (218)
Q Consensus 126 ~~ 127 (218)
++
T Consensus 473 ~~ 474 (481)
T 3pbl_A 473 GR 474 (481)
T ss_dssp --
T ss_pred cC
Confidence 53
No 9
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.82 E-value=2.9e-19 Score=149.72 Aligned_cols=112 Identities=25% Similarity=0.453 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcc----hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CcccchhH
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQAS----TAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG-YCTIPEDL 89 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~~----~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~-~~~~~~~~ 89 (218)
+.+++++++|..|.+..++.+... ...++.++++|++|++++++++|++||+|++++.++..+.... .......+
T Consensus 207 lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~ 286 (364)
T 2ks9_A 207 LPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQV 286 (364)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHH
Confidence 456788889999998877544321 1223456789999999999999999999999999888876542 12234556
Q ss_pred HHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhccc
Q psy3682 90 GIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 126 (218)
Q Consensus 90 ~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~ 126 (218)
..+..+++++||++||+||++++++||++++++++|+
T Consensus 287 ~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 323 (364)
T 2ks9_A 287 YLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC 323 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 7788899999999999999999999999999999764
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.82 E-value=4e-20 Score=159.55 Aligned_cols=83 Identities=28% Similarity=0.727 Sum_probs=70.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhc
Q psy3682 45 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK 124 (218)
Q Consensus 45 ~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~ 124 (218)
++++|++|++++++++|++||+||+++.++..+... .....+..++.+|+++||++||+||++++++||++++++++
T Consensus 381 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~---~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 457 (467)
T 3uon_A 381 SREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP---CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLM 457 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST---TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc---ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHh
Confidence 467999999999999999999999999999988764 34577888999999999999999999999999999999997
Q ss_pred cccCCC
Q psy3682 125 CKCGQV 130 (218)
Q Consensus 125 ~~~~~~ 130 (218)
|.+++.
T Consensus 458 c~~~~~ 463 (467)
T 3uon_A 458 CHYKNI 463 (467)
T ss_dssp ------
T ss_pred hhccCC
Confidence 765443
No 11
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.82 E-value=9.9e-20 Score=151.28 Aligned_cols=110 Identities=16% Similarity=0.381 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhc-chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHH
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQA-STAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVC 93 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~-~~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~ 93 (218)
+.+++++++|..|.+..++.++. ....++.++++|++|++++++++|++||+|++++.++..+... ......+..++
T Consensus 215 ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~ 292 (349)
T 1u19_A 215 IPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--SDFGPIFMTIP 292 (349)
T ss_dssp HHHHHHHHHHTTTTTSSCSCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCC--cccchHHHHHH
Confidence 45778889999998887765443 2233455678899999999999999999999999888777644 33456677788
Q ss_pred HHHHHhhcccchhhHHhccHHHHHHHHHHhccc
Q psy3682 94 LWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 126 (218)
Q Consensus 94 ~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~ 126 (218)
.+++++||++||+||++++++||++++++++|.
T Consensus 293 ~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~ 325 (349)
T 1u19_A 293 AFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG 325 (349)
T ss_dssp HHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhHHHHHHHhHHHHHHHHHHhccc
Confidence 999999999999999999999999999999764
No 12
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.81 E-value=8.5e-20 Score=156.88 Aligned_cols=82 Identities=39% Similarity=0.918 Sum_probs=70.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhc
Q psy3682 45 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK 124 (218)
Q Consensus 45 ~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~ 124 (218)
++++|++||+++++++|++||+||+++.++..+... .....+..++.+|+++||++||+||++++++||++++++++
T Consensus 366 ~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~---~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 442 (452)
T 3rze_A 366 NRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN---CCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILH 442 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CSCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHH
Confidence 478999999999999999999999999999888655 23456677999999999999999999999999999999998
Q ss_pred cccCC
Q psy3682 125 CKCGQ 129 (218)
Q Consensus 125 ~~~~~ 129 (218)
|++.+
T Consensus 443 ~~~~~ 447 (452)
T 3rze_A 443 IRSGE 447 (452)
T ss_dssp C----
T ss_pred hcccc
Confidence 76543
No 13
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.80 E-value=1e-19 Score=156.62 Aligned_cols=114 Identities=23% Similarity=0.382 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHH
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCL 94 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~ 94 (218)
+.+++++++|..|.+..++.+......++.++++|+++++++++++|++||+|+.++.++..+...........+..++.
T Consensus 300 ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~ 379 (434)
T 4ea3_A 300 VPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCT 379 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 45788889999999998877665555566677899999999999999999999999988887754432233344566788
Q ss_pred HHHHhhcccchhhHHhccHHHHHHHHHHhccccC
Q psy3682 95 WLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCG 128 (218)
Q Consensus 95 ~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~ 128 (218)
+++++||++||+||++++++||+++++++++.+.
T Consensus 380 ~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~ 413 (434)
T 4ea3_A 380 ALGYVNSCLNPILYAFLDENFKACFRKFCCASAL 413 (434)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 8999999999999999999999999999866443
No 14
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=147.29 Aligned_cols=104 Identities=24% Similarity=0.428 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc-------ccch
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-------TIPE 87 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~-------~~~~ 87 (218)
..+.++..+|.++.+..++. ..++++|++|++++++++|++||+||+++.++..+...... ....
T Consensus 185 ~p~~i~~~~y~~i~~~~~~~--------~~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (296)
T 2lnl_A 185 VPLFVMLFCYGFTLRTLFKA--------HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIG 256 (296)
T ss_dssp HHHHHHHHHHHHHTTTSSSC--------CCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH--------hhhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHH
Confidence 45667777887776554332 23557899999999999999999999999999888755211 1123
Q ss_pred hHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhccc
Q psy3682 88 DLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 126 (218)
Q Consensus 88 ~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~ 126 (218)
.+..++.+|+++||++||+||++++++||++++++++|+
T Consensus 257 ~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 257 RALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence 456688999999999999999999999999999999774
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.78 E-value=1.3e-18 Score=142.19 Aligned_cols=109 Identities=31% Similarity=0.550 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcch-------hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccch
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQAST-------AANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPE 87 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~~~-------~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~ 87 (218)
+.+++++++|..|.+..++..+... .....++++|++|++++++++|++||+|++++.++..+... ....
T Consensus 188 ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~---~~~~ 264 (315)
T 4amj_A 188 IPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD---LVPD 264 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---cchH
Confidence 4577889999999888776533211 11223468899999999999999999999999998887654 3456
Q ss_pred hHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcccc
Q psy3682 88 DLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKC 127 (218)
Q Consensus 88 ~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~ 127 (218)
.+..++.+++++||++||+||+ ++++||++++++++|..
T Consensus 265 ~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~ 303 (315)
T 4amj_A 265 WLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR 303 (315)
T ss_dssp HHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCC
Confidence 6777889999999999999999 99999999999997643
No 16
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.78 E-value=8.5e-19 Score=151.17 Aligned_cols=109 Identities=18% Similarity=0.313 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcc-------------hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q psy3682 15 AVTSVILGLFKHIKKAQRRTRQAS-------------TAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG 81 (218)
Q Consensus 15 ~~~~ii~~~y~~i~~~~~~~~~~~-------------~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~ 81 (218)
+.+++|+++|..|.+.+++.++.. ...+..++++|++|++++++++|++||+|++++.++..+...
T Consensus 211 lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~- 289 (448)
T 2z73_A 211 GPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPL- 289 (448)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc-
Confidence 446788889999887665433211 011123458899999999999999999999999998887643
Q ss_pred CcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcc
Q psy3682 82 YCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 82 ~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
......+..+..+++++||++||+||++++++||+++++++++
T Consensus 290 -~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 290 -EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPW 332 (448)
T ss_dssp -GGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGG
T ss_pred -ccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHH
Confidence 2344566778899999999999999999999999999999853
No 17
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.78 E-value=1.4e-19 Score=157.71 Aligned_cols=84 Identities=19% Similarity=0.399 Sum_probs=69.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------CcccchhHHHHHHHHHHhhcccchhhHHhccHHHH
Q psy3682 44 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG-------YCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFR 116 (218)
Q Consensus 44 ~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~-------~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR 116 (218)
.++++|++|++++++++|++||+||+++.++..+.... .......+..++.+|+++||++||+||++++++||
T Consensus 405 ~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR 484 (502)
T 3odu_A 405 GHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFK 484 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCC
T ss_pred hHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHH
Confidence 45579999999999999999999999999888764221 02233445568999999999999999999999999
Q ss_pred HHHHHHhcccc
Q psy3682 117 AAFIRLLKCKC 127 (218)
Q Consensus 117 ~~~~~~~~~~~ 127 (218)
++++++++|+.
T Consensus 485 ~~~~~ll~~~~ 495 (502)
T 3odu_A 485 TSAQHALTSGR 495 (502)
T ss_dssp CCHHHHHSSCS
T ss_pred HHHHHHhccCC
Confidence 99999997653
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.77 E-value=1.7e-18 Score=152.18 Aligned_cols=110 Identities=31% Similarity=0.573 Sum_probs=85.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcch--------------------------hhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy3682 14 QAVTSVILGLFKHIKKAQRRTRQAST--------------------------AANSVRTEQKASKVLGLVFFTFVLCWAP 67 (218)
Q Consensus 14 ~~~~~ii~~~y~~i~~~~~~~~~~~~--------------------------~~~~~~~~~k~~r~~~~iv~~F~icw~P 67 (218)
++.+++|+++|..|.+.+++..+... ..+..++++|+++++++++++|++||+|
T Consensus 358 ~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP 437 (514)
T 3sn6_R 358 YVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLP 437 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999887765432110 1112246789999999999999999999
Q ss_pred HHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcccc
Q psy3682 68 FFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKC 127 (218)
Q Consensus 68 ~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~ 127 (218)
|+++.++..+... .....+..++.+++++||++||+||+ ++++||++++++++|.+
T Consensus 438 ~~i~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~ 493 (514)
T 3sn6_R 438 FFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRR 493 (514)
T ss_dssp HHHHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC---
T ss_pred HHHHHHHHHHccc---ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCc
Confidence 9999998887543 34566788899999999999999999 89999999999997643
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=99.08 E-value=3e-11 Score=69.01 Aligned_cols=37 Identities=27% Similarity=0.448 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhcc
Q psy3682 89 LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 89 ~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
++.++.+++++||++||+||++++++||++++++++|
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 4567889999999999999999999999999998854
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.69 E-value=5e-10 Score=61.02 Aligned_cols=30 Identities=30% Similarity=0.694 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy3682 47 EQKASKVLGLVFFTFVLCWAPFFLLQILQA 76 (218)
Q Consensus 47 ~~k~~r~~~~iv~~F~icw~P~~i~~l~~~ 76 (218)
|+|++|++++++++|++||+||+++.++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 467889999999999999999999877654
No 21
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=90.74 E-value=2.6 Score=35.17 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=56.5
Q ss_pred HHHhhhhcchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHH
Q psy3682 30 AQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYT 109 (218)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~ 109 (218)
..+..++........+++++..|....++++.++..+-+.-+.++......... ...........++..=..+||.+--
T Consensus 312 I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ns~lNP 390 (434)
T 4ea3_A 312 MIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQ-PSSETAVAILRFCTALGYVNSCLNP 390 (434)
T ss_dssp HHHHHTTCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555666667777777666666655555555555554444322 2222223333344444778999988
Q ss_pred hccHHHHHHHHHHhccccCCC
Q psy3682 110 IFNRTFRAAFIRLLKCKCGQV 130 (218)
Q Consensus 110 ~~~~~fR~~~~~~~~~~~~~~ 130 (218)
+.---+.+.+++.++..+++.
T Consensus 391 iIY~~~~~~fR~~~~~~~~~~ 411 (434)
T 4ea3_A 391 ILYAFLDENFKACFRKFCCAS 411 (434)
T ss_dssp HHHHHHCHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHhCcc
Confidence 888899999999997765544
No 22
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=87.03 E-value=4.4 Score=33.49 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=25.7
Q ss_pred HHHHHHHhhcccchhhHHhccHHHHHHHHHHhccccCCC
Q psy3682 92 VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQV 130 (218)
Q Consensus 92 v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~~ 130 (218)
....++..=..+|+.+--+.---+-+.|++-++..+++.
T Consensus 389 ~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~ 427 (447)
T 4eiy_A 389 WLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH 427 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHH
Confidence 444555555666777777777777788888776655444
No 23
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=84.32 E-value=2 Score=35.98 Aligned_cols=30 Identities=13% Similarity=0.327 Sum_probs=18.0
Q ss_pred HHhhcccchhhHHhccHHHHHHHHHHhccc
Q psy3682 97 GYFSSILNPIIYTIFNRTFRAAFIRLLKCK 126 (218)
Q Consensus 97 ~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~ 126 (218)
+.+|.++==+.--=+.+.+++.++.+++|+
T Consensus 308 s~~NPiIY~~~~~~fR~~~~~~~~~~~~~~ 337 (448)
T 2z73_A 308 AIHNPMIYSVSHPKFREAISQTFPWVLTCC 337 (448)
T ss_dssp GGSHHHHHHHHCHHHHHHHHHHCGGGGSTT
T ss_pred HhhcchHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 444555555555556677777777666543
No 24
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=71.92 E-value=11 Score=31.43 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhccccC
Q psy3682 49 KASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCG 128 (218)
Q Consensus 49 k~~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~ 128 (218)
+-.|+...++++.++..+-+.=+.++..+... .............++..=..+|+.+--+.---+-+.|++-++..++
T Consensus 389 ~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~--~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~ 466 (488)
T 3eml_A 389 KEVHAAKSLAIIVGLFALCWLPLHIINCFTFF--CPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIR 466 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc--cCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHh
Confidence 33444444444444444433344444343322 1222233334555555666667777777777777777777765554
Q ss_pred CC
Q psy3682 129 QV 130 (218)
Q Consensus 129 ~~ 130 (218)
+.
T Consensus 467 ~~ 468 (488)
T 3eml_A 467 SH 468 (488)
T ss_dssp HT
T ss_pred hc
Confidence 43
No 25
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=67.39 E-value=19 Score=28.26 Aligned_cols=38 Identities=5% Similarity=0.037 Sum_probs=26.9
Q ss_pred HHHHHHHhhcccchhhHHhccHHHHHHHHHHhccccCC
Q psy3682 92 VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQ 129 (218)
Q Consensus 92 v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~ 129 (218)
....++..=..+|+.+--+.---+-+.+++-++...+.
T Consensus 287 ~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c 324 (349)
T 1u19_A 287 IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCC 324 (349)
T ss_dssp HHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcc
Confidence 34444555566788888888888899999988765543
No 26
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=44.58 E-value=1.1e+02 Score=23.93 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=26.0
Q ss_pred HHHHHhhcccchhhHHhccHHHHHHHHHHhccccCCC
Q psy3682 94 LWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQV 130 (218)
Q Consensus 94 ~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~~ 130 (218)
..+...=..+|+.+--+.---+-+.+++-++..+++.
T Consensus 287 ~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 323 (364)
T 2ks9_A 287 YLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCC 323 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 3344444567888877777888899999987665543
No 27
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=43.42 E-value=76 Score=26.72 Aligned_cols=37 Identities=8% Similarity=-0.103 Sum_probs=24.4
Q ss_pred HHHHHHHhhcccchhhHHhccHHHHHHHHHHhccccCC
Q psy3682 92 VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQ 129 (218)
Q Consensus 92 v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~ 129 (218)
....++..=+.+|+.+--+.-- +-+.|++-++...++
T Consensus 455 ~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~ 491 (514)
T 3sn6_R 455 EVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL 491 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCc
Confidence 3444455556677777777777 778888888665544
No 28
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=41.08 E-value=17 Score=17.22 Aligned_cols=13 Identities=38% Similarity=0.703 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhcc
Q psy3682 113 RTFRAAFIRLLKC 125 (218)
Q Consensus 113 ~~fR~~~~~~~~~ 125 (218)
+.||+.|++++..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 6788888888853
No 29
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=32.22 E-value=22 Score=24.45 Aligned_cols=24 Identities=13% Similarity=0.353 Sum_probs=21.6
Q ss_pred ccchhhHHhccHHHHHHHHHHhcc
Q psy3682 102 ILNPIIYTIFNRTFRAAFIRLLKC 125 (218)
Q Consensus 102 ~iNPiiY~~~~~~fR~~~~~~~~~ 125 (218)
|+||.+=-+.+.++|+.++.+...
T Consensus 26 ~iNp~ld~~~~~~~R~~Lka~~~g 49 (139)
T 3noh_A 26 CMNPLLDKLSDEDIREQLKAFVTG 49 (139)
T ss_dssp EECTTSGGGCCHHHHHHHHHHHTT
T ss_pred EeccccCccccHHHHHHHHHHhcC
Confidence 789999999999999999998743
No 30
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=26.95 E-value=1.3e+02 Score=22.82 Aligned_cols=36 Identities=11% Similarity=-0.034 Sum_probs=23.6
Q ss_pred HHHHHHhhcccchhhHHhccHHHHHHHHHHhccccCC
Q psy3682 93 CLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQ 129 (218)
Q Consensus 93 ~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~ 129 (218)
...+...=..+|+.+--+.-- +-+.+++-++...++
T Consensus 266 ~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~ 301 (315)
T 4amj_A 266 LFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF 301 (315)
T ss_dssp HHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCC
Confidence 333444445678888778887 788888888665443
No 31
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=25.16 E-value=1.3e+02 Score=24.34 Aligned_cols=21 Identities=29% Similarity=0.306 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhh
Q psy3682 14 QAVTSVILGLFKHIKKAQRRT 34 (218)
Q Consensus 14 ~~~~~ii~~~y~~i~~~~~~~ 34 (218)
++.+++|+++|..|.+.+++.
T Consensus 181 ~~p~~ii~~~y~~I~~~l~~~ 201 (452)
T 3rze_A 181 YLPTLLMLWFYAKIYKAVRQH 201 (452)
T ss_dssp HHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 456888999999999887654
No 32
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=22.94 E-value=42 Score=16.34 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy3682 53 VLGLVFFTFVLCWAPFFL 70 (218)
Q Consensus 53 ~~~~iv~~F~icw~P~~i 70 (218)
.+..++.+|+.|-+|-..
T Consensus 2 ~laa~~FlyFa~l~paIa 19 (26)
T 1btq_A 2 VLAAVIFIYFAALSPAIT 19 (26)
T ss_pred hHHHHHHHHHHHHcchhc
Confidence 356678888888888543
No 33
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=22.20 E-value=72 Score=26.08 Aligned_cols=75 Identities=13% Similarity=0.103 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccchhHHHHHHHHHHhhcccchhhHHhccHHHHHHHHHHhccccCC
Q psy3682 51 SKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQ 129 (218)
Q Consensus 51 ~r~~~~iv~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~v~~~l~~~ns~iNPiiY~~~~~~fR~~~~~~~~~~~~~ 129 (218)
.|....++++.++..+-+.=+.++..+.. ............++..=..+|+.+--+.--=+.+.|++-++...++
T Consensus 384 ~k~~k~l~~iv~~F~icw~P~~i~~~~~~----~~~~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 458 (467)
T 3uon_A 384 KKVTRTILAILLAFIITWAPYNVMVLINT----FCAPCIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMC 458 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCSTTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHH----HHhcccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhh
Confidence 45555555555554444444444443321 1222223344555555567788887788888888999888765543
Done!