Query psy3683
Match_columns 221
No_of_seqs 159 out of 1939
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 22:55:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.8 5.1E-22 1.7E-26 177.7 5.0 91 54-144 397-492 (510)
2 2rh1_A Beta-2-adrenergic recep 99.8 1.1E-18 3.8E-23 155.4 11.3 80 58-141 400-479 (500)
3 4eiy_A Adenosine receptor A2A/ 99.8 3.6E-18 1.2E-22 148.7 12.6 87 57-144 345-431 (447)
4 2ks9_A Substance-P receptor; w 99.7 6.8E-18 2.3E-22 143.5 12.2 86 56-141 238-324 (364)
5 3eml_A Human adenosine A2A rec 99.7 1.1E-17 3.6E-22 147.1 12.4 88 56-144 385-472 (488)
6 3vw7_A Proteinase-activated re 99.7 9.5E-19 3.2E-23 154.0 5.0 88 57-144 381-470 (484)
7 4dkl_A MU-type opioid receptor 99.7 9.9E-18 3.4E-22 146.4 10.3 83 56-138 373-455 (464)
8 3v2y_A Sphingosine 1-phosphate 99.7 7.6E-18 2.6E-22 150.9 8.4 85 58-143 413-497 (520)
9 3pbl_A D(3) dopamine receptor, 99.7 2.7E-17 9.3E-22 144.6 10.6 81 59-141 394-474 (481)
10 3uon_A Human M2 muscarinic ace 99.7 2.3E-17 7.9E-22 144.3 10.0 83 58-143 380-462 (467)
11 1u19_A Rhodopsin; G protein-co 99.7 1.2E-16 4.3E-21 134.5 12.7 83 56-140 243-325 (349)
12 3rze_A Histamine H1 receptor, 99.7 5.8E-17 2E-21 141.2 10.8 84 57-143 364-447 (452)
13 2lnl_A C-X-C chemokine recepto 99.7 4.5E-17 1.5E-21 135.0 9.1 83 58-140 206-295 (296)
14 4amj_A Beta-1 adrenergic recep 99.7 2.1E-16 7.3E-21 130.9 10.7 104 33-140 196-302 (315)
15 3sn6_R Lysozyme, beta-2 adrene 99.6 4.1E-16 1.4E-20 139.2 10.4 78 59-140 415-492 (514)
16 3odu_A C-X-C chemokine recepto 99.6 5.8E-17 2E-21 143.2 4.5 86 56-141 403-495 (502)
17 2z73_A Rhodopsin; visual pigme 99.6 6E-16 2E-20 135.4 10.7 79 58-138 253-331 (448)
18 4ea3_A Fusion protein of nocic 99.6 3.8E-16 1.3E-20 136.4 8.9 87 55-141 326-412 (434)
19 2koe_A Human cannabinoid recep 99.0 4.9E-11 1.7E-15 69.5 1.2 37 103-139 2-38 (40)
20 2ki9_A Cannabinoid receptor 2; 98.7 8.5E-10 2.9E-14 61.4 -1.8 29 61-89 1-29 (33)
21 4ea3_A Fusion protein of nocic 70.3 34 0.0011 28.6 10.0 92 52-144 320-411 (434)
22 2ks9_A Substance-P receptor; w 58.2 56 0.0019 26.1 8.9 85 59-143 238-322 (364)
23 4eiy_A Adenosine receptor A2A/ 44.3 58 0.002 26.8 6.9 31 110-140 393-423 (447)
24 2z73_A Rhodopsin; visual pigme 42.3 38 0.0013 28.3 5.5 24 114-137 311-334 (448)
25 3eml_A Human adenosine A2A rec 40.8 57 0.0019 27.2 6.4 31 109-139 433-463 (488)
26 2ket_A Cathelicidin-6; antimic 28.1 40 0.0014 16.3 1.8 13 127-139 4-16 (27)
27 3noh_A Putative peptide bindin 22.6 37 0.0013 23.9 1.6 23 116-138 26-48 (139)
28 1lv4_A Catestatin, chromograni 21.9 28 0.00096 17.1 0.6 9 1-9 3-11 (26)
29 1u19_A Rhodopsin; G protein-co 21.8 2.8E+02 0.0097 21.5 7.9 35 108-142 289-323 (349)
30 4dkl_A MU-type opioid receptor 21.3 2.4E+02 0.0082 23.0 6.9 83 61-144 375-457 (464)
31 1btq_A BAND 3 anion transport 20.5 54 0.0019 16.3 1.5 19 67-85 2-20 (26)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.84 E-value=5.1e-22 Score=177.72 Aligned_cols=91 Identities=25% Similarity=0.503 Sum_probs=65.5
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcc-----cccchHHHHHHHHHhhccchhhHHHHhccHH
Q psy3683 54 AANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-----TIPEDLGIVCLWLGYFSSILNPIIYTIFNRT 128 (221)
Q Consensus 54 ~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~-----~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~ 128 (221)
.....++++|++||+++|+++|++||+||+++.++..+.+.... .....++.++.||+|+|||+|||||+++|++
T Consensus 397 ~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~ 476 (510)
T 4grv_A 397 GSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSAN 476 (510)
T ss_dssp TTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 33455678999999999999999999999999999887654221 1123455688999999999999999999999
Q ss_pred HHHHHHHHhhcccCCC
Q psy3683 129 FRAAFIRLLKCKCGQV 144 (221)
Q Consensus 129 fR~~~~~~~~~~~~~~ 144 (221)
||++|+++|+|+|...
T Consensus 477 FR~aFk~iL~C~C~~~ 492 (510)
T 4grv_A 477 FRQVFLSTLACLCPGW 492 (510)
T ss_dssp CCCC------------
T ss_pred HHHHHHHHHhhcCCCC
Confidence 9999999998866543
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.77 E-value=1.1e-18 Score=155.39 Aligned_cols=80 Identities=40% Similarity=0.744 Sum_probs=69.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683 58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 137 (221)
Q Consensus 58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 137 (221)
.++++|++|++++|+++|++||+||+++.++..+... ..+..++.++.||+|+|||+||+||++ +++||+++++++
T Consensus 400 ~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~---~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il 475 (500)
T 2rh1_A 400 CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELL 475 (500)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHH
Confidence 3578999999999999999999999999999888632 346678889999999999999999996 999999999999
Q ss_pred hccc
Q psy3683 138 KCKC 141 (221)
Q Consensus 138 ~~~~ 141 (221)
+|++
T Consensus 476 ~~~~ 479 (500)
T 2rh1_A 476 CLRR 479 (500)
T ss_dssp TC--
T ss_pred hhhc
Confidence 6543
No 3
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.76 E-value=3.6e-18 Score=148.71 Aligned_cols=87 Identities=26% Similarity=0.541 Sum_probs=73.2
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHH
Q psy3683 57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRL 136 (221)
Q Consensus 57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 136 (221)
..++++|++|++++|+++|++||+||+++.++..+.+.. ......+..++.+|+++|||+||+||++++++||++++++
T Consensus 345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~ 423 (447)
T 4eiy_A 345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI 423 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcc-cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHH
Confidence 456789999999999999999999999999998875431 2245567779999999999999999999999999999999
Q ss_pred hhcccCCC
Q psy3683 137 LKCKCGQV 144 (221)
Q Consensus 137 ~~~~~~~~ 144 (221)
++|++++.
T Consensus 424 ~~~~~~r~ 431 (447)
T 4eiy_A 424 IRSHVLRQ 431 (447)
T ss_dssp HHHTC---
T ss_pred HHHHHhcc
Confidence 98765443
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.75 E-value=6.8e-18 Score=143.47 Aligned_cols=86 Identities=31% Similarity=0.651 Sum_probs=71.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc-ccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHH
Q psy3683 56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGY-CTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI 134 (221)
Q Consensus 56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 134 (221)
++.++++|+++++++++++|++||+||+++.++..+.+... ......++.+..+|+++||++||+||++++++||++++
T Consensus 238 ~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 317 (364)
T 2ks9_A 238 EQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFK 317 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34567899999999999999999999999999887754421 22334566788899999999999999999999999999
Q ss_pred HHhhccc
Q psy3683 135 RLLKCKC 141 (221)
Q Consensus 135 ~~~~~~~ 141 (221)
++++|+.
T Consensus 318 ~~~~~~~ 324 (364)
T 2ks9_A 318 HAFRCCP 324 (364)
T ss_dssp HHHSSSC
T ss_pred HHHhhcC
Confidence 9997643
No 5
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.74 E-value=1.1e-17 Score=147.12 Aligned_cols=88 Identities=26% Similarity=0.538 Sum_probs=76.2
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683 56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR 135 (221)
Q Consensus 56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~ 135 (221)
...++++|+++++++|+++|++||+||+++.++..+.+.. ......+..++.+|+++|||+||+||++++++||+++++
T Consensus 385 ~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 463 (488)
T 3eml_A 385 STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 463 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc-ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHH
Confidence 3456789999999999999999999999999998886532 234566777999999999999999999999999999999
Q ss_pred HhhcccCCC
Q psy3683 136 LLKCKCGQV 144 (221)
Q Consensus 136 ~~~~~~~~~ 144 (221)
+++|++.+.
T Consensus 464 l~~~~~~~~ 472 (488)
T 3eml_A 464 IIRSHVLRQ 472 (488)
T ss_dssp HHHHTTSCC
T ss_pred HHhhccccc
Confidence 998766554
No 6
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.74 E-value=9.5e-19 Score=154.01 Aligned_cols=88 Identities=18% Similarity=0.301 Sum_probs=61.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC--CcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHH
Q psy3683 57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPT--GYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI 134 (221)
Q Consensus 57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 134 (221)
+.++++|++||+++|+++|++||+||+++.++..+... ........++.++.+|+++|||+||+||++++++||++++
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~ 460 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY 460 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence 44667999999999999999999999999999876532 1222334566689999999999999999999999999999
Q ss_pred HHhhcccCCC
Q psy3683 135 RLLKCKCGQV 144 (221)
Q Consensus 135 ~~~~~~~~~~ 144 (221)
++++|.+...
T Consensus 461 ~ll~~~~~~~ 470 (484)
T 3vw7_A 461 SILCCKESSD 470 (484)
T ss_dssp ----------
T ss_pred HHHhhccCCC
Confidence 9997765443
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.73 E-value=9.9e-18 Score=146.43 Aligned_cols=83 Identities=24% Similarity=0.543 Sum_probs=71.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683 56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR 135 (221)
Q Consensus 56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~ 135 (221)
++.++++|++|++++|+++|++||+||+++.++..+...........++.++.+|+++||++||+||++++++||+++++
T Consensus 373 ~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ 452 (464)
T 4dkl_A 373 EKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFRE 452 (464)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHH
Confidence 34567899999999999999999999999999988865444444556667889999999999999999999999999999
Q ss_pred Hhh
Q psy3683 136 LLK 138 (221)
Q Consensus 136 ~~~ 138 (221)
+++
T Consensus 453 lc~ 455 (464)
T 4dkl_A 453 FCI 455 (464)
T ss_dssp HHC
T ss_pred Hhc
Confidence 853
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.72 E-value=7.6e-18 Score=150.86 Aligned_cols=85 Identities=32% Similarity=0.503 Sum_probs=70.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683 58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 137 (221)
Q Consensus 58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 137 (221)
.++++|+++|+++|+++|++||+||+++.++..+.+...+. ......++.+|+++|||+||+||++++++||+++++++
T Consensus 413 ~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~ 491 (520)
T 3v2y_A 413 SSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCD-ILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIM 491 (520)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCS-TTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 44689999999999999999999999999998876543222 33445577889999999999999999999999999999
Q ss_pred hcccCC
Q psy3683 138 KCKCGQ 143 (221)
Q Consensus 138 ~~~~~~ 143 (221)
+|++..
T Consensus 492 ~~~~~~ 497 (520)
T 3v2y_A 492 GRPLEV 497 (520)
T ss_dssp CSCC--
T ss_pred HHhccc
Confidence 765433
No 9
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.71 E-value=2.7e-17 Score=144.55 Aligned_cols=81 Identities=43% Similarity=0.949 Sum_probs=71.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhh
Q psy3683 59 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK 138 (221)
Q Consensus 59 ~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 138 (221)
++++|+++++++|+++|++||+||+++.++..+.+. ......++.++.+|+++|||+||+||++++++||++++++++
T Consensus 394 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~--~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 471 (481)
T 3pbl_A 394 LREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQT--CHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS 471 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc--ccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHh
Confidence 468999999999999999999999999999877543 445677888999999999999999999999999999999997
Q ss_pred ccc
Q psy3683 139 CKC 141 (221)
Q Consensus 139 ~~~ 141 (221)
|++
T Consensus 472 c~~ 474 (481)
T 3pbl_A 472 CGR 474 (481)
T ss_dssp C--
T ss_pred ccC
Confidence 643
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.71 E-value=2.3e-17 Score=144.34 Aligned_cols=83 Identities=28% Similarity=0.708 Sum_probs=70.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683 58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 137 (221)
Q Consensus 58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 137 (221)
.++++|+++++++|+++|++||+||.++.++..+... .....+..++.+|+++|||+||+||++++++||++++++|
T Consensus 380 ~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~---~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll 456 (467)
T 3uon_A 380 PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP---CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLL 456 (467)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST---TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc---ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHH
Confidence 3568999999999999999999999999999888653 2356778899999999999999999999999999999999
Q ss_pred hcccCC
Q psy3683 138 KCKCGQ 143 (221)
Q Consensus 138 ~~~~~~ 143 (221)
+|+++.
T Consensus 457 ~c~~~~ 462 (467)
T 3uon_A 457 MCHYKN 462 (467)
T ss_dssp C-----
T ss_pred hhhccC
Confidence 775543
No 11
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.70 E-value=1.2e-16 Score=134.45 Aligned_cols=83 Identities=18% Similarity=0.482 Sum_probs=70.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683 56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR 135 (221)
Q Consensus 56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~ 135 (221)
...++++|+++++++++++|++||+||+++.++..+... ......+..++.+++++||++||+||++++++||+++++
T Consensus 243 ~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~ 320 (349)
T 1u19_A 243 TTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVT 320 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCC--cccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence 345667899999999999999999999999888776543 233456677889999999999999999999999999999
Q ss_pred Hhhcc
Q psy3683 136 LLKCK 140 (221)
Q Consensus 136 ~~~~~ 140 (221)
+++|.
T Consensus 321 ~~~c~ 325 (349)
T 1u19_A 321 TLCCG 325 (349)
T ss_dssp HHTSS
T ss_pred Hhccc
Confidence 99664
No 12
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.70 E-value=5.8e-17 Score=141.22 Aligned_cols=84 Identities=38% Similarity=0.896 Sum_probs=71.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHH
Q psy3683 57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRL 136 (221)
Q Consensus 57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~ 136 (221)
..++++|+++++++|+++|++||+||+++.++..+.+.. ....+..++.+|+++|||+||+||++++++||++++++
T Consensus 364 ~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~---~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~l 440 (452)
T 3rze_A 364 HMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC---CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRI 440 (452)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc---ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHH
Confidence 446789999999999999999999999999998876542 34566779999999999999999999999999999999
Q ss_pred hhcccCC
Q psy3683 137 LKCKCGQ 143 (221)
Q Consensus 137 ~~~~~~~ 143 (221)
++|++..
T Consensus 441 l~~~~~~ 447 (452)
T 3rze_A 441 LHIRSGE 447 (452)
T ss_dssp HTC----
T ss_pred HHhcccc
Confidence 9876543
No 13
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.69 E-value=4.5e-17 Score=135.01 Aligned_cols=83 Identities=28% Similarity=0.535 Sum_probs=69.8
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcc-------cccchHHHHHHHHHhhccchhhHHHHhccHHHH
Q psy3683 58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-------TIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFR 130 (221)
Q Consensus 58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~-------~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR 130 (221)
.++++|++|++++++++|++||+||+++.++..+...... .....+..++.+|+++|||+||+||++++++||
T Consensus 206 ~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR 285 (296)
T 2lnl_A 206 MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFR 285 (296)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHH
T ss_pred hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 3567899999999999999999999999999887654211 112345668899999999999999999999999
Q ss_pred HHHHHHhhcc
Q psy3683 131 AAFIRLLKCK 140 (221)
Q Consensus 131 ~~~~~~~~~~ 140 (221)
++++++++|+
T Consensus 286 ~~~~~ll~cr 295 (296)
T 2lnl_A 286 HGFLKILAMH 295 (296)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhcCC
Confidence 9999999763
No 14
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.67 E-value=2.1e-16 Score=130.88 Aligned_cols=104 Identities=38% Similarity=0.675 Sum_probs=75.2
Q ss_pred ChhhHHHHHHHHHHhhhhhh---hhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHH
Q psy3683 33 NPHRLFKHIKKAQRRTRQAS---TAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLW 109 (221)
Q Consensus 33 ~~~~i~~~i~~~~~~~~~~~---~~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~ 109 (221)
.+.++.+.+++..++..... ......++++|+++++++++++|++||+||+++.++..+... .....+..++.+
T Consensus 196 ~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~---~~~~~~~~~~~~ 272 (315)
T 4amj_A 196 VALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD---LVPDWLFVAFNW 272 (315)
T ss_dssp HHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---cchHHHHHHHHH
Confidence 34555555554433322211 122234468899999999999999999999999999887543 234567778899
Q ss_pred HHhhccchhhHHHHhccHHHHHHHHHHhhcc
Q psy3683 110 LGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 140 (221)
Q Consensus 110 l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 140 (221)
++++||++||+||+ ++++||++++++++|.
T Consensus 273 l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 273 LGYANSAMNPIIYC-RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp HHHHGGGTHHHHGG-GSHHHHHHHHHHHC--
T ss_pred HHHHhccccHHHHc-CcHHHHHHHHHHhCCC
Confidence 99999999999999 8999999999999764
No 15
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.65 E-value=4.1e-16 Score=139.15 Aligned_cols=78 Identities=41% Similarity=0.769 Sum_probs=67.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhh
Q psy3683 59 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK 138 (221)
Q Consensus 59 ~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 138 (221)
++++|+++++++++++|++||+||+++.++..+... .....+..++.+|+++||++||+||+ ++++||++++++++
T Consensus 415 ~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 415 LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC 490 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhC
Confidence 467899999999999999999999999998877432 23556777899999999999999999 89999999999996
Q ss_pred cc
Q psy3683 139 CK 140 (221)
Q Consensus 139 ~~ 140 (221)
|+
T Consensus 491 ~~ 492 (514)
T 3sn6_R 491 LR 492 (514)
T ss_dssp --
T ss_pred cC
Confidence 54
No 16
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.64 E-value=5.8e-17 Score=143.20 Aligned_cols=86 Identities=19% Similarity=0.358 Sum_probs=70.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----c---ccccchHHHHHHHHHhhccchhhHHHHhccHH
Q psy3683 56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG----Y---CTIPEDLGIVCLWLGYFSSILNPIIYTIFNRT 128 (221)
Q Consensus 56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~----~---~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~ 128 (221)
.+.++++|+++++++|+++|++||+||+++.++..+.... . ......+..++.+|+++||++||+||++++++
T Consensus 403 ~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~ 482 (502)
T 3odu_A 403 SKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAK 482 (502)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCC
T ss_pred hhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHH
Confidence 3456689999999999999999999999999988764221 1 12234445588999999999999999999999
Q ss_pred HHHHHHHHhhccc
Q psy3683 129 FRAAFIRLLKCKC 141 (221)
Q Consensus 129 fR~~~~~~~~~~~ 141 (221)
||++++++++|+.
T Consensus 483 fR~~~~~ll~~~~ 495 (502)
T 3odu_A 483 FKTSAQHALTSGR 495 (502)
T ss_dssp CCCCHHHHHSSCS
T ss_pred HHHHHHHHhccCC
Confidence 9999999997644
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.64 E-value=6e-16 Score=135.43 Aligned_cols=79 Identities=22% Similarity=0.416 Sum_probs=68.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683 58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 137 (221)
Q Consensus 58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~ 137 (221)
.++++|++|++++++++|++||+|++++.++..+... ......+..+..+++++||++||+||++++++||+++++++
T Consensus 253 ~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~ 330 (448)
T 2z73_A 253 ANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPL--EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF 330 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG--GGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc--ccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHH
Confidence 3457899999999999999999999999998877532 22345666788899999999999999999999999999998
Q ss_pred h
Q psy3683 138 K 138 (221)
Q Consensus 138 ~ 138 (221)
+
T Consensus 331 ~ 331 (448)
T 2z73_A 331 P 331 (448)
T ss_dssp G
T ss_pred H
Confidence 5
No 18
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.64 E-value=3.8e-16 Score=136.44 Aligned_cols=87 Identities=24% Similarity=0.483 Sum_probs=66.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHH
Q psy3683 55 ANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI 134 (221)
Q Consensus 55 ~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 134 (221)
.++.++++|+++++++++++|++||+||.++.++..+...........+..++.+|+++||++||+||++++++||++++
T Consensus 326 ~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~ 405 (434)
T 4ea3_A 326 REKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR 405 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC
T ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788999999999999999999999999988765433222233455577889999999999999999999999999
Q ss_pred HHhhccc
Q psy3683 135 RLLKCKC 141 (221)
Q Consensus 135 ~~~~~~~ 141 (221)
++++|++
T Consensus 406 ~~~~~~~ 412 (434)
T 4ea3_A 406 KFCCASA 412 (434)
T ss_dssp -------
T ss_pred HHhCccc
Confidence 9986543
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=99.02 E-value=4.9e-11 Score=69.51 Aligned_cols=37 Identities=27% Similarity=0.448 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhhc
Q psy3683 103 LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 139 (221)
Q Consensus 103 ~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 139 (221)
++.++.+++++||++||+||++.+++||++++++++|
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 4567889999999999999999999999999998854
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.67 E-value=8.5e-10 Score=61.44 Aligned_cols=29 Identities=31% Similarity=0.732 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy3683 61 EQKASKVLGLVFFTFVLCWAPFFLLQILQ 89 (221)
Q Consensus 61 ~~k~~k~l~~v~~~F~lcw~Py~i~~l~~ 89 (221)
++|++|++++++++|++||+||+++.++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 35788999999999999999999987764
No 21
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=70.26 E-value=34 Score=28.61 Aligned_cols=92 Identities=11% Similarity=0.129 Sum_probs=51.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHH
Q psy3683 52 STAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRA 131 (221)
Q Consensus 52 ~~~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~ 131 (221)
.......+..++..++...++++.++..+-+.-+.++..+....... ..........++..=..+||.+--+.---+-+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~ 398 (434)
T 4ea3_A 320 RLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQP-SSETAVAILRFCTALGYVNSCLNPILYAFLDE 398 (434)
T ss_dssp SSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred cccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555566677777777776666555555555555543332222 22222233333444467888888888888889
Q ss_pred HHHHHhhcccCCC
Q psy3683 132 AFIRLLKCKCGQV 144 (221)
Q Consensus 132 ~~~~~~~~~~~~~ 144 (221)
.+++.++..+++.
T Consensus 399 ~fR~~~~~~~~~~ 411 (434)
T 4ea3_A 399 NFKACFRKFCCAS 411 (434)
T ss_dssp HHHHHHC------
T ss_pred HHHHHHHHHhCcc
Confidence 9999996655443
No 22
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=58.16 E-value=56 Score=26.12 Aligned_cols=85 Identities=7% Similarity=-0.041 Sum_probs=42.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhh
Q psy3683 59 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK 138 (221)
Q Consensus 59 ~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~ 138 (221)
++.++-.|..-.++++.++..+-+.-+.++..+..................+...=..+|+.+--+.---+-+++++.+.
T Consensus 238 ~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~ 317 (364)
T 2ks9_A 238 EQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFK 317 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 33445556665555555554444444444433321111111111112223333344456777777777778888999886
Q ss_pred cccCC
Q psy3683 139 CKCGQ 143 (221)
Q Consensus 139 ~~~~~ 143 (221)
..++.
T Consensus 318 ~~~~~ 322 (364)
T 2ks9_A 318 HAFRC 322 (364)
T ss_dssp HHHSS
T ss_pred HHHhh
Confidence 65544
No 23
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=44.28 E-value=58 Score=26.82 Aligned_cols=31 Identities=13% Similarity=0.068 Sum_probs=15.2
Q ss_pred HHhhccchhhHHHHhccHHHHHHHHHHhhcc
Q psy3683 110 LGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 140 (221)
Q Consensus 110 l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 140 (221)
++..=..+|+.+--+.--=+-+.+++.++..
T Consensus 393 ~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~ 423 (447)
T 4eiy_A 393 LAIVLSHTNSVVNPFIYAYRIREFRQTFRKI 423 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhhhHhccHHHHHHHHHH
Confidence 3333334455554455555555566655443
No 24
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=42.32 E-value=38 Score=28.27 Aligned_cols=24 Identities=13% Similarity=0.290 Sum_probs=9.9
Q ss_pred ccchhhHHHHhccHHHHHHHHHHh
Q psy3683 114 SSILNPIIYTIFNRTFRAAFIRLL 137 (221)
Q Consensus 114 ns~~NPiiY~~~~~~fR~~~~~~~ 137 (221)
|.++--+.--=..+.+++.++.++
T Consensus 311 NPiIY~~~~~~fR~~~~~~~~~~~ 334 (448)
T 2z73_A 311 NPMIYSVSHPKFREAISQTFPWVL 334 (448)
T ss_dssp HHHHHHHHCHHHHHHHHHHCGGGG
T ss_pred cchHHHHhhHHHHHHHHHHHHHHH
Confidence 333333333333444444444444
No 25
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=40.75 E-value=57 Score=27.23 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=14.9
Q ss_pred HHHhhccchhhHHHHhccHHHHHHHHHHhhc
Q psy3683 109 WLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 139 (221)
Q Consensus 109 ~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~ 139 (221)
.++.+=..+|+.+--+.--=+-+.+++.++.
T Consensus 433 ~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ 463 (488)
T 3eml_A 433 YLAIVLSHTNSVVNPFIYAYRIREFRQTFRK 463 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhchhhhhhcCHHHHHHHHH
Confidence 3333334444444444444455555555543
No 26
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=28.14 E-value=40 Score=16.33 Aligned_cols=13 Identities=38% Similarity=0.703 Sum_probs=10.2
Q ss_pred HHHHHHHHHHhhc
Q psy3683 127 RTFRAAFIRLLKC 139 (221)
Q Consensus 127 ~~fR~~~~~~~~~ 139 (221)
+.||+.++++|..
T Consensus 4 krfrkkfkklfkk 16 (27)
T 2ket_A 4 KRFRKKFKKLFKK 16 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5789999888853
No 27
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=22.55 E-value=37 Score=23.87 Aligned_cols=23 Identities=13% Similarity=0.397 Sum_probs=21.0
Q ss_pred chhhHHHHhccHHHHHHHHHHhh
Q psy3683 116 ILNPIIYTIFNRTFRAAFIRLLK 138 (221)
Q Consensus 116 ~~NPiiY~~~~~~fR~~~~~~~~ 138 (221)
|+||.+=-+.+.++|+.++....
T Consensus 26 ~iNp~ld~~~~~~~R~~Lka~~~ 48 (139)
T 3noh_A 26 CMNPLLDKLSDEDIREQLKAFVT 48 (139)
T ss_dssp EECTTSGGGCCHHHHHHHHHHHT
T ss_pred EeccccCccccHHHHHHHHHHhc
Confidence 78999999999999999999874
No 28
>1lv4_A Catestatin, chromogranin A; glycoprotein, amidation, phosphorylation, signaling protein; NMR {Synthetic} SCOP: j.95.1.1
Probab=21.88 E-value=28 Score=17.10 Aligned_cols=9 Identities=56% Similarity=1.003 Sum_probs=6.0
Q ss_pred Cccchhhcc
Q psy3683 1 MRVSFRERN 9 (221)
Q Consensus 1 ~~~s~~~~~ 9 (221)
|++||+.+.
T Consensus 3 MKlsFRar~ 11 (26)
T 1lv4_A 3 MKLSFRARA 11 (26)
T ss_dssp SCSCSCCCS
T ss_pred ceEeeeeee
Confidence 677777554
No 29
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=21.78 E-value=2.8e+02 Score=21.46 Aligned_cols=35 Identities=6% Similarity=0.041 Sum_probs=23.8
Q ss_pred HHHHhhccchhhHHHHhccHHHHHHHHHHhhcccC
Q psy3683 108 LWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCG 142 (221)
Q Consensus 108 ~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 142 (221)
..++..-..+|+.+--+.--=+-+++++.+....+
T Consensus 289 ~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~ 323 (349)
T 1u19_A 289 MTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLC 323 (349)
T ss_dssp HHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhc
Confidence 34444445667777777777788999998865443
No 30
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=21.26 E-value=2.4e+02 Score=23.04 Aligned_cols=83 Identities=10% Similarity=0.093 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhhcc
Q psy3683 61 EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 140 (221)
Q Consensus 61 ~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~ 140 (221)
.++-.|+...++++.++..+-+.=+.++..+..... ............++.+=..+|+.+--+.--=+-+++++.++..
T Consensus 375 ~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~-~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~l 453 (464)
T 4dkl_A 375 DRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALIT-IPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREF 453 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhc-CCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHH
Confidence 344567777777777666666666666555433221 1223334444555555667888888888888899999999765
Q ss_pred cCCC
Q psy3683 141 CGQV 144 (221)
Q Consensus 141 ~~~~ 144 (221)
|++.
T Consensus 454 c~~~ 457 (464)
T 4dkl_A 454 CIPT 457 (464)
T ss_dssp HC--
T ss_pred hccc
Confidence 5443
No 31
>1btq_A BAND 3 anion transport protein; NMR {} SCOP: j.35.1.1 PDB: 1btr_A
Probab=20.54 E-value=54 Score=16.31 Aligned_cols=19 Identities=26% Similarity=0.516 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHhHHHHH
Q psy3683 67 VLGLVFFTFVLCWAPFFLL 85 (221)
Q Consensus 67 ~l~~v~~~F~lcw~Py~i~ 85 (221)
.+..++.+|+.|-+|-..+
T Consensus 2 ~laa~~FlyFa~l~paIaF 20 (26)
T 1btq_A 2 VLAAVIFIYFAALSPAITF 20 (26)
T ss_pred hHHHHHHHHHHHHcchhcc
Confidence 3556777888888886543
Done!