RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3685
(1042 letters)
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine
carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Length = 446
Score = 264 bits (676), Expect = 5e-79
Identities = 87/315 (27%), Positives = 134/315 (42%), Gaps = 18/315 (5%)
Query: 733 QWFEQKLDHFNIEEPRTWKQRYFVNSTWYKH-GGPIFLMIGGEGEASAKWMVEGTWLDYA 791
+F+QK+DHF +T+ QRY V ++K GG I G EG+ G D A
Sbjct: 6 LYFQQKVDHFGFNTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVA 65
Query: 792 HNHNALAVQVEHRFYGKSHPLSDLSVESL---QYLSAEQALADLAYFITSMNTLYSLPAH 848
A+ V EHR+YG+S P D S + +L++EQALAD A I + +
Sbjct: 66 EELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAEN 125
Query: 849 TKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASGPLRAVVDFPE---YFGVVADALATVS 905
IA GGSY G LAAW R KYPH+V GA++AS P+ D + +V
Sbjct: 126 QPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSG 185
Query: 906 TECVKAVQTATHTISKMLKSPSDAKYLTEQFKLCTPLDINNAKDVSSFVESLADNIAGVV 965
C +++ + I+++ + S ++LT LC+PL + + + ++ N+A V
Sbjct: 186 PHCSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVD 245
Query: 966 QYNKDNRES-SNHITIDDLCALLMDKKQDPVARYAAVNDLILSKEKKKNPCVDYKYEKMI 1024
N I +C L + + + V Y Y +
Sbjct: 246 YPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQAL---------NVYYNYSGQV 296
Query: 1025 EDMKNTSWDSEMANG 1039
N S + + G
Sbjct: 297 -KCLNISETATSSLG 310
>3jyh_A Dipeptidyl-peptidase 2; structural genomics, structural genomics
consortium, SGC, aminopeptidase, cleavage on PAIR of
basic residues; HET: NAG BMA; 2.19A {Homo sapiens} PDB:
3n0t_A*
Length = 469
Score = 242 bits (619), Expect = 9e-71
Identities = 85/319 (26%), Positives = 131/319 (41%), Gaps = 18/319 (5%)
Query: 732 DQWFEQKLDHFNIEEP--RTWKQRYFVNSTWYKHG-GPIFLMIGGEGEASAKWMVEGTWL 788
+++F+Q+LDHFN E +T+ QR+ V+ ++ G GPIF G EG+ A
Sbjct: 10 ERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVA 69
Query: 789 DYAHNHNALAVQVEHRFYGKSHPLSDLSVES--LQYLSAEQALADLAYFITSMNTLYSLP 846
+ A AL V EHR+YGKS P S + + L+ EQALAD A + ++
Sbjct: 70 ELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQ 129
Query: 847 AHTKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASGPLRAVVDFP---EYFGVVADALAT 903
IAFGGSY G L+A+LR KYPHLV GA++AS P+ AV ++F V
Sbjct: 130 -DAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEG 188
Query: 904 VSTECVKAVQTATHTISKMLKSPSDAKYLTEQFKLCTPLDINNAKDVSSFVESLADNIAG 963
S +C + V+ A I + + + +F C PL A +
Sbjct: 189 QSPKCTQGVREAFRQIKDLFLQGAYDT-VRWEFGTCQPLSDEKDLTQLFMFARNAFTVLA 247
Query: 964 VVQYNKDNR--ESSNHITIDDLCALLMDKKQDPVARYAAVNDLILSKEKKKNPCVDYKYE 1021
++ Y + C L+ + + A+ L+ ++ Y+
Sbjct: 248 MMDYPYPTDFLGPLPANPVKVGCDRLLSEA-QRITGLRALAGLVY-----NASGSEHCYD 301
Query: 1022 KMIEDMKNTSWDSEMANGG 1040
Sbjct: 302 IYRLYHSCADPTGCGTGPD 320
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 161 bits (410), Expect = 2e-45
Identities = 75/184 (40%), Positives = 97/184 (52%), Gaps = 6/184 (3%)
Query: 299 FSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRK 356
+ L G + Y C C K FSR D+L EH+ H G + YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 357 LNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT 414
+LT+H + H G + YKC C K FS++ NL H + H G + Y C C K FS+ +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMK 472
H+ H G + YKC C K FSR+ NL H + H G + YKC C K FSR+ L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 473 LHQG 476
H G
Sbjct: 183 THTG 186
Score = 156 bits (397), Expect = 8e-44
Identities = 75/182 (41%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 220 HQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLN 277
+ L G + Y C C K FSR D+L EH+ H G + YKC C K FS K +
Sbjct: 5 GSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD 64
Query: 278 LTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEH 335
LT+H + H G + YKC C K FS++ NL H + H G + Y C C K FS+ +L H
Sbjct: 65 LTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124
Query: 336 KEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 393
+ H G + YKC C K FSR+ NL H + H G + YKC C K FSR+ L H + H
Sbjct: 125 QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Query: 394 QG 395
G
Sbjct: 185 TG 186
Score = 150 bits (381), Expect = 1e-41
Identities = 72/184 (39%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 434 FSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRK 491
+ + G + Y C C K FSR +L +H + H G + YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 492 DNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLT 548
+LT ++ H G + YKC C K FS + NL H + H G + Y C C K FS+ +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK 606
H+ H G + YKC C K FSR+DNL H+ H G + YKC C K FSR+ L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 607 IHQG 610
H G
Sbjct: 183 THTG 186
Score = 149 bits (379), Expect = 2e-41
Identities = 65/184 (35%), Positives = 92/184 (50%), Gaps = 6/184 (3%)
Query: 18 FSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRN 75
+ + G + Y C C K FSR +L +H++ H G + YKC C K FS
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 76 CYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLT 133
LT H H G + YKC C K FS +++L H++ H G + Y C C K FS+ +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 134 EHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKK 191
H H G + YKC C K FS + +L H++ H G + YKC C K + + L H++
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 192 LHQG 195
H G
Sbjct: 183 THTG 186
Score = 149 bits (378), Expect = 3e-41
Identities = 68/165 (41%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
Y C C K FSR +L +H++ H G + YKC C K FS K +LT H++ H G + YKC
Sbjct: 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 67 LCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSK 124
C K FS+ L H H G + Y C C K FS + L H++ H G + YKC C K
Sbjct: 82 ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 125 EFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
FSR L H H G + YKC C K FS + +L H++ H G
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186
Score = 139 bits (354), Expect = 5e-38
Identities = 76/221 (34%), Positives = 97/221 (43%), Gaps = 42/221 (19%)
Query: 99 FSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYK 156
SS + L G + Y C C K FSR+ +L EH H G + YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 157 SSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTD 215
L H++ H G + YKC C K FS++ NL
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKS---------------------------FSQRANLRA 95
Query: 216 HKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSR 274
H++ H G K Y C C K FS+ +L H+ H G + YKC C K FSR
Sbjct: 96 HQRTHTGE--KP--------YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSR 145
Query: 275 KLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
+ NL H + H G + YKC C K FSR+ L H + H G
Sbjct: 146 EDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186
Score = 137 bits (348), Expect = 3e-37
Identities = 69/172 (40%), Positives = 91/172 (52%), Gaps = 7/172 (4%)
Query: 461 FSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSK 517
+ L G + Y C C K FSR D+L + ++ H G + YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 518 GNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLT 575
+LT H + H G + YKC C K FS++ NL H+ H G + Y C C K FS+ +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
H+ H G + YKC C K FSR+ NL H + H G + YKC C K FSR+
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Score = 120 bits (304), Expect = 2e-31
Identities = 70/231 (30%), Positives = 90/231 (38%), Gaps = 58/231 (25%)
Query: 488 FSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRK 544
+ + G + Y C C K FS +L EH + H G + YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 545 DNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLT 602
+LT H+ H G + YKC C K FS++ NL H+ H G + Y C C K FS+ +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEF 661
H + H G + YKC C K FS
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFS-------------------------------------- 144
Query: 662 FKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ L HQ YKC C K FSR+D L H+ H G
Sbjct: 145 ----REDNL-----HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 133 bits (338), Expect = 5e-36
Identities = 52/188 (27%), Positives = 74/188 (39%), Gaps = 19/188 (10%)
Query: 280 KHMKIHQG-IRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCD--LCLKEFSRKDNLT 333
+ RY C C +++ L H+ H G + + C C K F+ +LT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 334 EHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR---YKCDL--CSKEFSRKGN 385
H H G + + CD C +F+ K N+ KH I+ Y C C K F +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 386 LTKHMKLHQGIR-YKC--DLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLT 441
L H H Y+C + C K FS L H+++H G K D CS
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 442 KHMK-IHQ 448
KH+ HQ
Sbjct: 182 KHVAECHQ 189
Score = 128 bits (323), Expect = 7e-34
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 27 HKKIHQG-IRYKCNL--CSKEFSRKYNLTDHKKIHQGIR-YKCN--LCSKEFSRNCYLTE 80
K + RY C+ C +++ + L H H G + + C C K F+ +LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 81 HMEQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR---YKCNL--CSKEFSRNCYL 132
H H G + + CD C F+ K+++ +H I+ Y C+ C K F ++ L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 133 TEHMEQHQGIR-YKC--DLCSKDFSYKSSLIEHKKLHQGIR----YKCNLCSKEYFFKRN 185
H H Y+C + C K FS S L H+K+H G C+ K +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT--WTLY 180
Query: 186 LTEHKKLHQ 194
L + HQ
Sbjct: 181 LKHVAECHQ 189
Score = 127 bits (321), Expect = 1e-33
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 18/177 (10%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCN--LCSKEFSRKYNLTDHKKIHQGIR- 62
Y C C +++ + L H H G + + C C K F+ ++LT H H G +
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 63 YKCN--LCSKEFSRNCYLTEHMEQHQGIR---YKCDL--CSKDFSYKSSLIEHKKLHQGI 115
+ C+ C F+ + +H + I+ Y C C K F + L H+ H
Sbjct: 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 116 R-YKCN--LCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKK-LHQ 167
Y+C C K FS L H + H G K D CS + ++H HQ
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 124 bits (313), Expect = 1e-32
Identities = 51/188 (27%), Positives = 74/188 (39%), Gaps = 20/188 (10%)
Query: 361 KHMKIHQG-IRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCD--LCLKEFSRKDNLT 414
+ RY C C +++ L H+ H G + + C C K F+ +LT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 415 EHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR---YKCDL--CSKEFSRKGN 466
H H G + + CD C +F+ K N+ KH I+ Y C C K F +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 467 LTKHMKLHQGIR-YKC--DLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLT 521
L H H Y+C + C K FS L K+H G K D CS +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 522 EHMKQ-HQ 528
+H+ + HQ
Sbjct: 182 KHVAECHQ 189
Score = 123 bits (311), Expect = 2e-32
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 442 KHMKIHQG-IRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCD--LCLKEFSRKDNLT 495
+ RY C C +++ L H+ H G + + C C K F+ +LT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 496 D-RKIHQGIR-YKCD--LCSKEFSSKGNLTEHMKQHQGIR---YKCDL--CSKEFSRKDN 546
H G + + CD C F++K N+ +H + I+ Y C C K F + +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 547 LTEHKEIHQGIR-YKC--DLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLT 602
L H+ H Y+C + C K FS L H+++H G K D CS
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 603 KHMK-IHQ 609
KH+ HQ
Sbjct: 182 KHVAECHQ 189
Score = 120 bits (304), Expect = 2e-31
Identities = 55/197 (27%), Positives = 74/197 (37%), Gaps = 28/197 (14%)
Query: 189 HKKLHQG-IRYNCDL--CSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCD--LCLK 243
K L RY C C +++ L H H G K + C C K
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE-----KP-----FPCKEEGCEK 52
Query: 244 EFSRKDNLTEHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR---YKCDL--C 295
F+ +LT H H G + + CD C +F+ K N+ KH I+ Y C C
Sbjct: 53 GFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC 112
Query: 296 SKEFSRKGNLTKHMKLHQGIR-YKC--DLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSK 351
K F + L H H Y+C + C K FS L H+++H G K D CS
Sbjct: 113 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSF 172
Query: 352 KFSRKLNLTKHMK-IHQ 367
KH+ HQ
Sbjct: 173 VGKTWTLYLKHVAECHQ 189
Score = 116 bits (293), Expect = 6e-30
Identities = 54/201 (26%), Positives = 73/201 (36%), Gaps = 32/201 (15%)
Query: 160 IEHKKLHQG-IRYKCNL--CSKEYFFKRNLTEHKKLHQGIR-YNCD--LCSKEFSRKDNL 213
+ K L RY C+ C Y L H H G + + C C K F+ +L
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 214 TDHKKMHQGNLTKHMKLHQGIRYKCD--LCLKEFSRKDNLTEHKEIHQGIR---YKCDL- 267
T H H G K+ + CD C F+ K N+ +H I+ Y C
Sbjct: 61 TRHSLTHTGE--KN--------FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE 110
Query: 268 -CSKKFSRKLNLTKHMKIHQGIR-YKC--DLCSKEFSRKGNLTKHMKLHQGIR----YKC 319
C K F + L H H Y+C + C K FS L +H K+H G C
Sbjct: 111 NCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 170
Query: 320 DLCLKEFSRKDNLTEHKEIHQ 340
K ++ L E HQ
Sbjct: 171 SFVGKTWT--LYLKHVAECHQ 189
Score = 95.0 bits (237), Expect = 2e-22
Identities = 49/234 (20%), Positives = 72/234 (30%), Gaps = 74/234 (31%)
Query: 500 HQGI-----RYKCDL--CSKEFSSKGNLTEHMKQHQGIR-YKCD--LCSKEFSRKDNLTE 549
+ + RY C C ++ L H+ +H G + + C C K F+ +LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 550 HKEIHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR---YKCDL--CSKKFSRKLNL 601
H H G + + CD C F+ K N+ +H I+ Y C C K F + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 602 TKHMKIHQGIR-YKC--DLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDC 658
H H Y+C + C K FS
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFS----------------------------------- 147
Query: 659 LEFFKTEQNTTLGKLNKILHQDI-----RYKCDLCSKDFSRKDNLTEH-KEIHQ 706
+ L H+ + K D CS +H E HQ
Sbjct: 148 -------LPSRL-----KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 87.3 bits (217), Expect = 9e-20
Identities = 44/207 (21%), Positives = 67/207 (32%), Gaps = 72/207 (34%)
Query: 526 QHQGI-----RYKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKEFSRKDNLT 575
+ + RY C C +++ L H H G + + C C K F+ +LT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 576 EHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR---YKCDL--CSKEFSRKDI 627
H H G + + CD C +F+ K N+ KH I+ Y C C K F
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK---- 117
Query: 628 PYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR----- 682
++ L +HQ
Sbjct: 118 --------------------------------------KHNQL-----KVHQFSHTQQLP 134
Query: 683 YKC--DLCSKDFSRKDNLTEHKEIHQG 707
Y+C + C K FS L H+++H G
Sbjct: 135 YECPHEGCDKRFSLPSRLKRHEKVHAG 161
Score = 32.6 bits (75), Expect = 0.44
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 7/39 (17%)
Query: 676 ILHQDI-----RYKCDL--CSKDFSRKDNLTEHKEIHQG 707
+ + + RY C C +++ L H H G
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG 39
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 112 bits (283), Expect = 5e-29
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 36/174 (20%)
Query: 290 YKCDLCSKEFSRKGNLTKHMK---LHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYK 345
+ D CS+EF + L H+ +H + + C
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG----------------------G 41
Query: 346 CDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKC- 400
C + F + L HM+ H G + +KC C K +SR NL H++ H G + Y C
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 401 -DLCLKEFSRKDNLTEHKE-IHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQG 449
+ C K FS + +H+ H + Y C L C+K+++ +L KH+K G
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 111 bits (279), Expect = 2e-28
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 452 YKCDLCSKEFSRKGNLTKHMK---LHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIRYKC 507
+ D CS+EF + L H+ +H + + C C
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG---------------------GC 42
Query: 508 DLCSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKC-- 561
+ F ++ L HM++H G + +KC C K +SR +NL H H G + Y C
Sbjct: 43 SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH 102
Query: 562 DLCSKEFSRKDNLTEHKE-IHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQG 610
+ CSK FS + +H+ H + Y C L C+K+++ +L KH+K G
Sbjct: 103 EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 103 bits (260), Expect = 6e-26
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 9 YKCDLCSKEFSRKYNLTDH---KKIHQGIR-YKCNLC-----SKEFSRKYNLTDHKKIHQ 59
+ D CS+EF + L H + IH + + C+ + F +Y L H + H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 60 GIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKC--DLCSKDFSYKSSLIEHKK-LH 112
G + +KC C K +SR L H+ H G + Y C + CSK FS S +H+ H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 113 QGIR-YKCNL--CSKEFSRNCYLTEHMEQHQG 141
+ Y C L C+K ++ L +H++ G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 100 bits (252), Expect = 7e-25
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 36 YKCNLCSKEFSRKYNLTDH---KKIHQGIR-YKCNLC-----SKEFSRNCYLTEHMEQHQ 86
+ + CS+EF + L H + IH + + C+ + F L HM +H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 87 GIR-YKCDL--CSKDFSYKSSLIEHKKLHQGIR-YKCN--LCSKEFSRNCYLTEHMEQ-H 139
G + +KC C K +S +L H + H G + Y C CSK FS +H + H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 140 QGIR-YKCDL--CSKDFSYKSSLIEHKKLHQG 168
+ Y C L C+K ++ SSL +H K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 93.8 bits (234), Expect = 2e-22
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQ---HQGIR-YKCDLC-----SKDFSYKSSLIEHKKLHQ 113
+ + CS+EF L H+ H + + C + F + L+ H + H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 114 GIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKC--DLCSKDFSYKSSLIEHKK-LH 166
G + +KC C K +SR L H+ H G + Y C + CSK FS S +H+ H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 167 QGIR-YKCNL--CSKEYFFKRNLTEHKKLHQG 195
+ Y C L C+K Y +L +H K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 91.9 bits (229), Expect = 9e-22
Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 53/188 (28%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQ---HQGIR-YKCDLC-----SKDFSYKSSLIEHKKLHQ 167
+ + CS+EF L H+ H + + C + F + L+ H + H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 168 GIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTK 226
G + +KC C K +SR NL
Sbjct: 64 GEKPHKCTFEG-------------------------CRKSYSRL-----------ENLKT 87
Query: 227 HMKLHQGIR-YKC--DLCLKEFSRKDNLTEHKE-IHQGIR-YKCDL--CSKKFSRKLNLT 279
H++ H G + Y C + C K FS + +H+ H + Y C L C+K+++ +L
Sbjct: 88 HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147
Query: 280 KHMKIHQG 287
KH+K G
Sbjct: 148 KHVKTVHG 155
Score = 62.6 bits (153), Expect = 1e-11
Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 63/182 (34%)
Query: 559 YKCDLCSKEFSRKDNLTEH---KEIHQGIR-YKCDLC-----SKKFSRKLNLTKHMKIHQ 609
+ D CS+EF ++ L H + IH + + C + F + L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 610 GIR-YKCDL--CSKEFSRKDI------------PYEVTVKEESYEGDSINVEENNGNDAV 654
G + +KC C K +SR + PY
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM------------------------ 99
Query: 655 TRDCLEFFKTEQNTTLGKLNKILHQDIR-------YKCDL--CSKDFSRKDNLTEHKEIH 705
C ++ + K HQ+ R Y C L C+K ++ +L +H +
Sbjct: 100 ---CEHEGCSKAFSNASDRAK--HQN-RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Query: 706 QG 707
G
Sbjct: 154 HG 155
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 108 bits (273), Expect = 3e-28
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 290 YKCD--LCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR- 343
+ C C+K + + +L H + H G + Y+CD C + FSR D L H+ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLH 393
++C C +KFSR +L H + H G + + C C K+F+R L +H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 108 bits (273), Expect = 3e-28
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 371 YKCD--LCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR- 424
+ C C+K + + +L H + H G + Y+CD C + FSR D L H+ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLH 474
++C C +KFSR +L H + H G + + C C K+F+R L +H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 106 bits (268), Expect = 2e-27
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 505 YKCD--LCSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR- 558
+ C C+K + +L H ++H G + Y+CD C + FSR D L H+ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIH 608
++C C ++FSR D+L H H G + + C C KKF+R L +H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 101 bits (253), Expect = 2e-25
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 9 YKCD--LCSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIHQGIR- 62
+ C C+K + + +L H + H G + Y+C+ C + FSR L H++ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLH 112
++C C ++FSR+ +L H H G + + C C K F+ L+ H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 98.4 bits (246), Expect = 2e-24
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 20/124 (16%)
Query: 198 YNCD--LCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLT 252
+ C C+K + + +L H + H G + Y+CD C + FSR D L
Sbjct: 7 FMCAYPGCNKRYFKL-----------SHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLK 55
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKH 308
H+ H G++ ++C C +KFSR +L H + H G + + C C K+F+R L +H
Sbjct: 56 RHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Query: 309 MKLH 312
+H
Sbjct: 116 HNMH 119
Score = 97.2 bits (243), Expect = 4e-24
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 425 YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIRY 479
+ C C+K++ + +L H + H G + Y+CD C + FSR L +H + H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK- 65
Query: 480 KCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDL-- 536
++C C ++FS +L H + H G + + C
Sbjct: 66 ------------------------PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101
Query: 537 CSKEFSRKDNLTEHKEIH 554
C K+F+R D L H +H
Sbjct: 102 CQKKFARSDELVRHHNMH 119
Score = 96.4 bits (241), Expect = 9e-24
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 31/137 (22%)
Query: 398 YKCD--LCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR- 451
+ C C K + + +L H H G + Y+CD C ++FSR L +H + H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLC 510
++C C ++FSR +L H + H G + + C + C
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC------------------------RWPSC 102
Query: 511 SKEFSSKGNLTEHMKQH 527
K+F+ L H H
Sbjct: 103 QKKFARSDELVRHHNMH 119
Score = 96.0 bits (240), Expect = 1e-23
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 63 YKCN--LCSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLHQGIR- 116
+ C C+K + + +L H +H G + Y+CD C + FS L H++ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLH 166
++C C ++FSR+ +L H H G + + C C K F+ L+ H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 94.9 bits (237), Expect = 3e-23
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 532 YKCD--LCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR- 585
+ C C+K + + +L H H G + Y+CD C + FSR D L H+ H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKD 626
++C C +KFSR +L H + H G + + C C K+F+R D
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSD 110
Score = 88.7 bits (221), Expect = 4e-21
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 32/138 (23%)
Query: 90 YKCD--LCSKDFSYKSSLIEHKKLHQGIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR- 143
+ C C+K + S L H + H G + Y+C+ C + FSR+ L H +H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDL 202
++C C + FS L H + H G + + C S
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS------------------------- 101
Query: 203 CSKEFSRKDNLTDHKKMH 220
C K+F+R D L H MH
Sbjct: 102 CQKKFARSDELVRHHNMH 119
Score = 87.6 bits (218), Expect = 1e-20
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 171 YKCN--LCSKEYFFKRNLTEHKKLHQGIR-YNCDL--CSKEFSRKDNLTDHKKMHQGNLT 225
+ C C+K YF +L H + H G + Y CD C + FSR L
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRS-----------DQLK 55
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKH 281
+H + H G++ ++C C ++FSR D+L H H G + + C C KKF+R L +H
Sbjct: 56 RHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Query: 282 MKIH 285
+H
Sbjct: 116 HNMH 119
Score = 74.9 bits (185), Expect = 3e-16
Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 60/160 (37%)
Query: 559 YKCD--LCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR- 612
+ C C+K + + +L H H G + Y+CD C ++FSR L +H + H G++
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 613 YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGK 672
++C C ++FS ++ L
Sbjct: 67 FQCKTCQRKFS------------------------------------------RSDHL-- 82
Query: 673 LNKILHQDIR-----YKCDL--CSKDFSRKDNLTEHKEIH 705
H + C C K F+R D L H +H
Sbjct: 83 ---KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 53.7 bits (130), Expect = 8e-09
Identities = 27/132 (20%), Positives = 43/132 (32%), Gaps = 57/132 (43%)
Query: 586 YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKDIPYEVTVKEESYEG 640
+ C C+K++ + +L H + H G + Y+CD C + FSR
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSR---------------- 50
Query: 641 DSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRK 695
+L + HQ ++C C + FSR
Sbjct: 51 -----------------------------SDQLKR--HQRRHTGVKPFQCKTCQRKFSRS 79
Query: 696 DNLTEHKEIHQG 707
D+L H H G
Sbjct: 80 DHLKTHTRTHTG 91
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 105 bits (265), Expect = 1e-26
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 241 CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG----------IR 289
K I + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YK 345
+C K F K L H+++H G + + C C K F+R +NL HK H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 346 CDL--CSKKFSRKLNLTKHMKIHQGIR-YKCD 374
C+ C ++F+ + KHM +H +
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 103 bits (258), Expect = 1e-25
Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 18/152 (11%)
Query: 268 CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG----------IR 316
I + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YK 372
+C K F K L H +H G + + C C K F+R NL H + H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 373 CDL--CSKEFSRKGNLTKHMKLHQGIR-YKCD 401
C+ C + F+ + KHM +H +
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 96.6 bits (241), Expect = 2e-23
Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 26/169 (15%)
Query: 430 CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG-IRYKCDLCLKE 487
I + C + FS L H+ + + +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN----- 57
Query: 488 FSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSRK 544
H +C K F +K L H++ H G + + C C K F+R
Sbjct: 58 ------------HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARS 105
Query: 545 DNLTEHKEIHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCD 589
+NL HK H G + +KC+ C + F+ + +H +H +
Sbjct: 106 ENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 96.2 bits (240), Expect = 3e-23
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 19/152 (12%)
Query: 484 CLKEFSRKDNLTDRK-IHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG----------IR 531
K I + C + FS+ L H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YK 587
+C K F K L H +H G + + C C K F+R +NL HK H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 588 CDL--CSKKFSRKLNLTKHMKIHQGIR-YKCD 616
C+ C ++F+ + KHM +H +
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 92.3 bits (230), Expect = 6e-22
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG----------IRYKCNLCSKEFSRKYNLTDHKKIH 58
C + FS + L H + +C K F KY L +H ++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 59 QGIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLH 112
G + + C C K F+R+ L H H G + +KC+ C + F+ S +H +H
Sbjct: 86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145
Query: 113 QGIR-YKCN 120
+ +
Sbjct: 146 TSDKSGPSS 154
Score = 92.3 bits (230), Expect = 6e-22
Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 19/152 (12%)
Query: 403 CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG----------IR 451
K I + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTD-RKIHQGIR-YK 506
+C K F K L H+++H G + + C C K F+R +NL ++ H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 507 CDL--CSKEFSSKGNLTEHMKQHQGIR-YKCD 535
C+ C + F++ + +HM H +
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 92.3 bits (230), Expect = 7e-22
Identities = 32/155 (20%), Positives = 51/155 (32%), Gaps = 25/155 (16%)
Query: 376 CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG----------IR 424
+ + C + FS L H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YK 480
+C K F K L H+++H G + + C C K F+R NL H + H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 481 CDL--CLKEFSRKDNLTDRKIHQGI-----RYKCD 508
C+ C + F+ N +DRK H +
Sbjct: 123 CEFEGCDRRFA---NSSDRKKHMHVHTSDKSGPSS 154
Score = 87.0 bits (216), Expect = 5e-20
Identities = 27/133 (20%), Positives = 41/133 (30%), Gaps = 17/133 (12%)
Query: 510 CSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG----------IR 558
+ C + FS L H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YK 614
+C K F K L H +H G + + C C K F+R NL H + H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 615 CDL--CSKEFSRK 625
C+ C + F+
Sbjct: 123 CEFEGCDRRFANS 135
Score = 84.3 bits (209), Expect = 4e-19
Identities = 34/207 (16%), Positives = 56/207 (27%), Gaps = 63/207 (30%)
Query: 95 CSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDF 153
+ K + + C + FS L H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV------------ 50
Query: 154 SYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNL 213
+ H C K F K
Sbjct: 51 -----------------------GGPE---------QNNHVCYWEECPREGKSFKAK--- 75
Query: 214 TDHKKMHQGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDL-- 267
L H+++H G + + C C K F+R +NL HK H G + +KC+
Sbjct: 76 --------YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127
Query: 268 CSKKFSRKLNLTKHMKIHQGIR-YKCD 293
C ++F+ + KHM +H +
Sbjct: 128 CDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 72.7 bits (179), Expect = 5e-15
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 2 KLHQGIGYKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIH 58
H +C K F KY L +H ++H G + + C C K F+R NL HK+ H
Sbjct: 56 NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115
Query: 59 QGIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + +KC C + F+ + +HM H +
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 48.1 bits (115), Expect = 2e-06
Identities = 25/152 (16%), Positives = 34/152 (22%), Gaps = 45/152 (29%)
Query: 564 CSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEF 622
K I + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV------------ 50
Query: 623 SRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR 682
P + E C K KL H +
Sbjct: 51 ---GGPEQNNHVCYWEE------------------CPREGK--SFKAKYKLVN--HIRVH 85
Query: 683 -----YKCDL--CSKDFSRKDNLTEHKEIHQG 707
+ C C K F+R +NL HK H G
Sbjct: 86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 101 bits (254), Expect = 2e-25
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKL---HQGIR-Y 317
+C C KKF K L H + H G + ++C C K + RK NL +H ++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 318 KCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 368
C +C + F R+ L H H G YKC CS++F +K +L HM K+H G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 99.1 bits (248), Expect = 1e-24
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKK---IHQGIR-Y 63
+C C K+F KY L H + H G + ++C C K + RK NL +H+ +++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 64 KCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHK-KLHQG 114
C++C + F R L HM H G YKC CS+ F K L H KLH G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 98.3 bits (246), Expect = 2e-24
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQ---HQGIR-Y 90
+C C K+F KY L H + H G + ++C C K + R L EH + ++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 91 KCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHM 136
C +C + F + L H H G YKC+ CS++F + L HM
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114
Score = 98.0 bits (245), Expect = 3e-24
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEH---KEIHQGIR-Y 559
+C C K+F SK L H ++H G + ++C C K + RK+NL EH +++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 560 KCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 610
C +C + F R+ L H H G YKC CS++F +K +L HM K+H G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 97.2 bits (243), Expect = 5e-24
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK---IHQGIR-Y 371
+C C K+F K L H H G + ++C C K + RK NL +H +++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 372 KCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKE-IHQG 422
C +C + F R+ L HM H G YKC C ++F +K +L H +H G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 93.7 bits (234), Expect = 8e-23
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDL 483
+C C KKF K L H + H G + ++C C K + RK NL +H +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC-------- 59
Query: 484 CLKEFSRKDNLTDRKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEF 541
+++ + + C +C + F + L HM H G YKC CS++F
Sbjct: 60 ---------------MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF 104
Query: 542 SRKDNLTEHKE-IHQG 556
+K +L H +H G
Sbjct: 105 MQKKDLQSHMIKLHSG 120
Score = 91.0 bits (227), Expect = 9e-22
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEH---KEIHQGIR-Y 586
+C C K+F K L H H G + ++C C K + RK+NL EH +++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 587 KCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
C +C + F R++ L HM H G YKC CS++F +K
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK 107
Score = 80.6 bits (200), Expect = 3e-18
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 39/148 (26%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDL 202
+C C K F K L H + H G + ++C
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECP---------------------------K 40
Query: 203 CSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGI 261
C K + RK+NL +H+ + +++ + + C +C + F R+ L H H G
Sbjct: 41 CGKCYFRKENLLEHEARNC--------MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92
Query: 262 R-YKCDLCSKKFSRKLNLTKHM-KIHQG 287
YKC CS++F +K +L HM K+H G
Sbjct: 93 MPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 69.8 bits (172), Expect = 2e-14
Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 58/160 (36%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK---IHQGIR-Y 613
+C C K+F K L H H G + ++C C K + RK NL +H +++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 614 KCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKL 673
C +C + F R+
Sbjct: 68 TCSVCQETFRRRM----------------------------------------------- 80
Query: 674 NKILHQDIR-----YKCDLCSKDFSRKDNLTEHKE-IHQG 707
LH YKC CS+ F +K +L H +H G
Sbjct: 81 ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 98.3 bits (246), Expect = 1e-24
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 23 NLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTE 80
+ + + + + C C + F++ YNL H++ H R Y C++C K F R +L +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
H H + +KC C K F +L HK LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 94.4 bits (236), Expect = 3e-23
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 307
+ + + + + C C + F++ NL H + H R Y CD+C K F R+ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
H +H + +KC C K F + L HK +H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 94.4 bits (236), Expect = 3e-23
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 388
+ + + + + C C + F++ NL H + H R Y CD+C K F R+ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
H +H + +KC C K F + L HK +H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 94.0 bits (235), Expect = 4e-23
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 517 KGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNL 574
+ + + + C C + F++ NL H+ H R Y CD+C K F R+D+L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 575 TEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
+H+ IH + +KC C K F + L H +H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 92.9 bits (232), Expect = 1e-22
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 302 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNL 359
+ + + + C C + F++ NL H+ H R Y CD+C K F R+ +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 360 TKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
H IH + +KC C K F + L H LH
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 87.9 bits (219), Expect = 6e-21
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
+ C C + F++ YNL H++ H R Y C++C K F R+ +L DH+ IH + +KC
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 67 LCSKEFSRNCYLTEHMEQHQGIR-YKC 92
C K F ++ L H H
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 87.5 bits (218), Expect = 7e-21
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 77 YLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTE 134
+ + + + C C + F+ +L+ H++ H R Y C++C K F R +L +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
H H + +KC C K F +L HK LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 85.9 bits (214), Expect = 2e-20
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 469
+ + + + + C C + F++ NL H + H R Y CD+C K F R+ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
H +H + +KC C K F + L + +H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 84.4 bits (210), Expect = 8e-20
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIH 554
R + + + C C + F+ NL H + H R Y CD+C K F R+D+L +H+ IH
Sbjct: 9 RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH 68
Query: 555 QGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
+ +KC C K F + L HK +H
Sbjct: 69 SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 84.0 bits (209), Expect = 1e-19
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 13/111 (11%)
Query: 185 NLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLK 243
+ + + + + C C + F++ NL H++ H + Y CD+C K
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE-----R-----PYTCDICHK 53
Query: 244 EFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
F R+D+L +H+ IH + +KC C K F + L H +H
Sbjct: 54 AFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 83.3 bits (207), Expect = 2e-19
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 102 KSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSL 159
S + + + + C C + F+++ L H H R Y CD+C K F + L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 160 IEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+H+ +H + +KC C K + R L HK LH
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98
Score = 80.6 bits (200), Expect = 2e-18
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 603
+ + + + + C C + F++ NL H+ H R Y CD+C K F R+ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
H IH + +KC C K F +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQS 86
Score = 79.4 bits (197), Expect = 5e-18
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 464 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNL 520
+ + + + C C + F++ NL + H R Y CD+C K F + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 521 TEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+H H + +KC C K F + L HK +H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 64.0 bits (157), Expect = 2e-12
Identities = 26/142 (18%), Positives = 41/142 (28%), Gaps = 54/142 (38%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYE 630
+ + + + + C C + F++ NL H + H R Y CD+C K F
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFR------- 56
Query: 631 VTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKC 685
+ L H+ I +KC
Sbjct: 57 -----------------------------------RQDHL-----RDHRYIHSKEKPFKC 76
Query: 686 DLCSKDFSRKDNLTEHKEIHQG 707
C K F + L HK +H
Sbjct: 77 QECGKGFCQSRTLAVHKTLHMQ 98
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 96.8 bits (242), Expect = 7e-24
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 505 YKCDL--CSKEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
C C+K F + +H+ H + C C K F L H+ +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 562 DL--CSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQG 610
C K FS NL H IH G R Y C C+KKF++ NL H+ H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 95.3 bits (238), Expect = 2e-23
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 236 YKCDL--CLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
C C K F + +H H + C C K F L +H +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 293 DL--CSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQG 341
C K FS NL H+++H G R Y C C K+F++ NL H H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 95.3 bits (238), Expect = 2e-23
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Query: 317 YKCDL--CLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
C C K F + +H H + C C K F L +H +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 374 DL--CSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQG 422
C K FS NL H+++H G R Y C C K+F++ NL H H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 93.0 bits (232), Expect = 2e-22
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
C C+K F + H H + C C K F L H+ +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 66 NL--CSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLHQG 114
C K FS + L H+ H G R Y C C+K F+ ++L H H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 87.6 bits (218), Expect = 1e-20
Identities = 35/138 (25%), Positives = 50/138 (36%), Gaps = 30/138 (21%)
Query: 398 YKCDL--CLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
C C K F + +H H + C C K F L +H +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 455 DL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCS 511
C K FS NL H+++H G R Y C D C+
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPF------------------------DGCN 101
Query: 512 KEFSSKGNLTEHMKQHQG 529
K+F+ NL H+ H
Sbjct: 102 KKFAQSTNLKSHILTHAK 119
Score = 77.9 bits (193), Expect = 3e-17
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 117 YKCNL--CSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
C C+K F N + +H+ H + C C K F S L H+ +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 174 NL--CSKEYFFKRNLTEHKKLHQGIR-YNCDL--CSKEFSRKDNLTDHKKMHQG 222
C K + NL H ++H G R Y C C+K+F++ NL H H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 76.8 bits (190), Expect = 7e-17
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 171 YKCNL--CSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHM 228
C C+K + + +H H + C C K F L +H
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVES-----------SKLKRHQ 54
Query: 229 KLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHM 282
+H G + ++C C K FS NL H IH G R Y C C+KKF++ NL H+
Sbjct: 55 LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114
Query: 283 KIHQG 287
H
Sbjct: 115 LTHAK 119
Score = 65.6 bits (161), Expect = 5e-13
Identities = 31/161 (19%), Positives = 44/161 (27%), Gaps = 59/161 (36%)
Query: 559 YKCDL--CSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
C C+K F + +H H + C C K F L +H +H G + ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 616 DL--CSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKL 673
C K FS + L
Sbjct: 66 TFEGCGKRFS------------------------------------------LDFNL--- 80
Query: 674 NKILHQDIR-----YKCDL--CSKDFSRKDNLTEHKEIHQG 707
H I Y C C+K F++ NL H H
Sbjct: 81 --RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 96.0 bits (240), Expect = 9e-24
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
Y C C K F+ K H +H G+R Y C +C K+F K++L H KIH GI+ Y+CN
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 67 LCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSL 105
+C+K F H+ + Y+ ++ + S
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107
Score = 92.5 bits (231), Expect = 1e-22
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 419 IHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + Y C C K F+ K +HM +H G+R Y C +C K+F K +L HMK+H G
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 477 IR-YKCDLCLKEFSRKDNLTDRKIHQGIR-YKCDLCSKEFSSKGNLT 521
I+ Y+C++C K F +D+ + + Y+ + + +
Sbjct: 63 IKPYECNICAKRFMWRDSFHRH-VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 91.0 bits (227), Expect = 5e-22
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
Y C C K F+ K H +H G+R Y C +C KKF K +L HMKIH GI+ Y+C+
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 294 LCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT 333
+C+K F + + +H+ + Y+ + + +
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 91.0 bits (227), Expect = 5e-22
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
Y C C K F+ K H +H G+R Y C +C KKF K +L HMKIH GI+ Y+C+
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 375 LCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT 414
+C+K F + + +H+ + Y+ + + +
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 91.0 bits (227), Expect = 5e-22
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
Y C C K F+ K H +H G+R Y C +C KKF K +L HMKIH GI+ Y+C+
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 456 LCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT 495
+C+K F + + +H+ + Y+ + + +
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 88.7 bits (221), Expect = 3e-21
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQ 555
G + Y C C K F+ K HM H G+R Y C +C K+F K +L H +IH
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 556 GIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLT 602
GI+ Y+C++C+K F +D+ H+ + + Y+ + + +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 87.9 bits (219), Expect = 6e-21
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 56 KIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQ 113
G + Y C C K F+ HM H G+R Y C +C K F K L+ H K+H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 114 GIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSL 159
GI+ Y+CN+C+K F H+ + Y+ ++ + S
Sbjct: 62 GIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107
Score = 87.5 bits (218), Expect = 9e-21
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
Y C C K F+ K H +H G+R Y C +C K+F K +L H +IH GI+ Y+C+
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 590 LCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
+C+K+F + + H + + Y+ + +
Sbjct: 70 ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEA 104
Score = 77.9 bits (193), Expect = 2e-17
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C C K F+ HM H G+R Y C +C K F K L+ H K+H GI+ Y+CN
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 175 LCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLT 214
+C+K + ++ + H+ + + Y + + +
Sbjct: 70 ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 73.2 bits (181), Expect = 8e-16
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
Y C +C K+F K++L H KIH GI+ Y+CN+C+K F + + H+ + + Y+
Sbjct: 38 YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAA 95
Query: 67 LCSKEFSRNCYLT 79
+ + +
Sbjct: 96 KAEQNTTEASGPS 108
Score = 72.9 bits (180), Expect = 1e-15
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 553 IHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + Y C C K F+ K H +H G+R Y C +C KKF K +L HMKIH G
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 611 IR-YKCDLCSKEFSRK 625
I+ Y+C++C+K F +
Sbjct: 63 IKPYECNICAKRFMWR 78
Score = 69.8 bits (172), Expect = 2e-14
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMK 229
Y C C K + K H +H G+R Y C +C K+F K + L HMK
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHH-----------LVGHMK 58
Query: 230 LHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLT 279
+H GI+ Y+C++C K F +D+ H+ + + Y+ + + +
Sbjct: 59 IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 47.1 bits (113), Expect = 1e-06
Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 57/135 (42%)
Query: 580 IHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEES 637
G + Y C C K F+ K +HM +H G+R Y C +C K+F
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFK-------------- 48
Query: 638 YEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDF 692
L + H I Y+C++C+K F
Sbjct: 49 ----------------------------MKHHL-----VGHMKIHTGIKPYECNICAKRF 75
Query: 693 SRKDNLTEHKEIHQG 707
+D+ H+ +
Sbjct: 76 MWRDSF--HRHVTSC 88
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 92.9 bits (232), Expect = 7e-23
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
+KC++C K FSRKD L H H G++ YKC C + +L +H IH R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 590 LCSKKFSRKLNLTKHMKIHQGIR-YKC 615
+C LT H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.6 bits (226), Expect = 4e-22
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
+KC++C K FSRK L HM+ H G++ YKC C + +L KH+++H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 321 LCLKEFSRKDNLTEHKEIHQGIR-YKC 346
+C LT H H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.6 bits (226), Expect = 4e-22
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
+KC++C K FSRK L HM+ H G++ YKC C + +L KH+++H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 402 LCLKEFSRKDNLTEHKEIHQGIR-YKC 427
+C LT H H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.6 bits (226), Expect = 5e-22
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
+KC++C K FSRKD L H H G++ YKC C + +L KH++IH R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 294 LCSKEFSRKGNLTKHMKLHQGIR-YKC 319
+C LT H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.2 bits (225), Expect = 8e-22
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
+KC++C K FSRK L H + H G++ YKC C + +L H +IH R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 67 LCSKEFSRNCYLTEHMEQHQGIR-YKC 92
+C + LT H+ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 87.9 bits (219), Expect = 4e-21
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
+KC +C K FSRK L H + H G++ YKC C + + L +H+ H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 94 LCSKDFSYKSSLIEHKKLHQGIR-YKC 119
+C S L H + H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 82.9 bits (206), Expect = 3e-19
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
+KC++C K FSRK L HM+ H G++ YKC C + +L KH+++H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 483 LCLKEFSRKDNLTD-RKIHQGIR-YKC 507
+C LT + H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 80.5 bits (200), Expect = 2e-18
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEI 257
+ C++C K FSRKD L H + H G K YKC C + +L +H I
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGV--K--------PYKCKTCDYAAADSSSLNKHLRI 58
Query: 258 HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
H R +KC +C LT H++ H G
Sbjct: 59 HSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 77.8 bits (193), Expect = 1e-17
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 479 YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
+KC++C K FSRKD L + H G++ YKC C + +L +H++ H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 536 LCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+C LT H H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 77.1 bits (191), Expect = 2e-17
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC +C K FSR L HM H G++ YKC C + SSL +H ++H R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 175 LCSKEYFFKRNLTEHKKLHQG 195
+C LT H + H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTG 89
Score = 76.3 bits (189), Expect = 5e-17
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
+KC++C K FSRKD L H H G++ YKC C + +L KH++IH R +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 617 LCSKEFSRK 625
+C
Sbjct: 69 ICPYASRNS 77
Score = 57.8 bits (141), Expect = 1e-10
Identities = 27/128 (21%), Positives = 37/128 (28%), Gaps = 53/128 (41%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSIN 644
+KC++C K FSRK L HM+ H G++ YKC C +
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSS------------------ 50
Query: 645 VEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDNLT 699
+ H I +KC +C LT
Sbjct: 51 -----------------------------SLNKHLRIHSDERPFKCQICPYASRNSSQLT 81
Query: 700 EHKEIHQG 707
H H G
Sbjct: 82 VHLRSHTG 89
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 91.4 bits (228), Expect = 2e-22
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 532 YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YK 587
Y C + C + FS+ +LT H IH G + ++C +C + FSR D+LT H H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 588 CDLCSKKFSRKLNLTKHMKIHQG 610
CD+C +KF+R +H KIH
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 91.0 bits (227), Expect = 3e-22
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 290 YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YK 345
Y C + C + FS+ G+LT+H+++H G + ++C +C++ FSR D+LT H H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 346 CDLCSKKFSRKLNLTKHMKIHQG 368
CD+C +KF+R +H KIH
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 91.0 bits (227), Expect = 3e-22
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 371 YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YK 426
Y C + C + FS+ G+LT+H+++H G + ++C +C++ FSR D+LT H H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 427 CDLCSKKFSRKLNLTKHMKIHQG 449
CD+C +KF+R +H KIH
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 89.8 bits (224), Expect = 8e-22
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 398 YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YK 453
Y C + C + FS+ +LT H IH G + ++C +C + FSR +LT H++ H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 454 CDLCSKEFSRKGNLTKHMKLHQG 476
CD+C ++F+R +H K+H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 84.8 bits (211), Expect = 5e-20
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YK 64
Y C + C + FS+ +LT H +IH G + ++C +C + FSR +LT H + H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 65 CNLCSKEFSRNCYLTEHMEQHQG 87
C++C ++F+R+ H + H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 80.6 bits (200), Expect = 1e-18
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 15/94 (15%)
Query: 198 YNCDL--CSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEH 254
Y C + C + FS+ G+LT+H+++H G + ++C +C++ FSR D+LT H
Sbjct: 5 YACPVESCDRRFSQS-----------GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 53
Query: 255 KEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
H G + + CD+C +KF+R +H KIH
Sbjct: 54 IRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87
Score = 79.4 bits (197), Expect = 3e-18
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 28/108 (25%)
Query: 425 YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIRYKC 481
Y C + C ++FS+ +LT+H++IH G + ++C +C + FSR +LT H++ H G +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK--- 61
Query: 482 DLCLKEFSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQG 529
+ CD+C ++F+ H K H
Sbjct: 62 ----------------------PFACDICGRKFARSDERKRHTKIHLR 87
Score = 79.4 bits (197), Expect = 3e-18
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 90 YKCDL--CSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YK 145
Y C + C + FS SL H ++H G + ++C +C + FSR+ +LT H+ H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 146 CDLCSKDFSYKSSLIEHKKLHQG 168
CD+C + F+ H K+H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 77.9 bits (193), Expect = 1e-17
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 63 YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YK 118
Y C + C + FS++ LT H+ H G + ++C +C ++FS L H + H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 119 CNLCSKEFSRNCYLTEHMEQHQG 141
C++C ++F+R+ H + H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 76.0 bits (188), Expect = 5e-17
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 559 YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YK 614
Y C + C + FS+ +LT H IH G + ++C +C + FSR +LT H++ H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 615 CDLCSKEFSRKD 626
CD+C ++F+R D
Sbjct: 65 CDICGRKFARSD 76
Score = 69.0 bits (170), Expect = 2e-14
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 117 YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YK 172
Y C + C + FS++ LT H+ H G + ++C +C ++FS L H + H G + +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 173 CNLCSKEYFFKRNLTEHKKLHQG 195
C++C +++ H K+H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 59.0 bits (144), Expect = 5e-11
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 55/130 (42%)
Query: 586 YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDS 642
Y C + C ++FS+ +LT+H++IH G + ++C +C + FSR
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSR------------------ 46
Query: 643 INVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDN 697
L H + CD+C + F+R D
Sbjct: 47 ---------------------------SDHLTT--HIRTHTGEKPFACDICGRKFARSDE 77
Query: 698 LTEHKEIHQG 707
H +IH
Sbjct: 78 RKRHTKIHLR 87
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 88.5 bits (220), Expect = 3e-21
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 514 FSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKEFSR 570
S G E + H C+K +++ +L H H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 571 KDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQ 609
D LT H H G + ++C +C++ FSR +L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 88.5 bits (220), Expect = 3e-21
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 271 KFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFS 327
+ +IH C+K +++ +L H++ H G + YKC C F+
Sbjct: 2 SSGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 328 RKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQ 367
R D LT H H G + ++C +C++ FSR +L HMK HQ
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 88.5 bits (220), Expect = 3e-21
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 352 KFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFS 408
+ +IH C+K +++ +L H++ H G + YKC C F+
Sbjct: 2 SSGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 409 RKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQ 448
R D LT H H G + ++C +C++ FSR +L HMK HQ
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 87.7 bits (218), Expect = 6e-21
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 299 FSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSR 355
G + ++H C K +++ +L H H G + YKC C +F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 356 KLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 394
LT+H + H G + ++C +C++ FSR +L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 87.7 bits (218), Expect = 6e-21
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 380 FSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSR 436
G + ++H C K +++ +L H H G + YKC C +F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 437 KLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 475
LT+H + H G + ++C +C++ FSR +L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 83.4 bits (207), Expect = 2e-19
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 245 FSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSR 301
E + IH C+K +++ +L H++ H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 302 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQ 340
LT+H + H G + ++C +C + FSR D+L H + HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 83.4 bits (207), Expect = 2e-19
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 326 FSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSR 382
E + IH C+K +++ +L H++ H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 383 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQ 421
LT+H + H G + ++C +C + FSR D+L H + HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 83.1 bits (206), Expect = 2e-19
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 222 GNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNL 278
G + ++H C K +++ +L H H G + YKC C +F+R L
Sbjct: 7 GPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 279 TKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 313
T+H + H G + ++C +C++ FSR +L HMK HQ
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 77.7 bits (192), Expect = 2e-17
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 488 FSRKDNLTD-RKIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSR 543
+ R+IH C+K ++ +L H++ H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 544 KDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQ 582
D LT H H G + ++C +C++ FSR D+L H + HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 75.7 bits (187), Expect = 8e-17
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 433 KFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFS 489
+ +IH C+K +++ +L H++ H G + YKC C F+
Sbjct: 2 SSGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 490 RKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQ 528
R D LT + H G + ++C +C++ FS +L HMK+HQ
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 73.0 bits (180), Expect = 7e-16
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 541 FSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSR 597
E + IH C+K +++ +L H H G + YKC C +F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 598 KLNLTKHMKIHQGIR-YKCDLCSKEFSRKD 626
LT+H + H G + ++C +C++ FSR D
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSD 89
Score = 72.7 bits (179), Expect = 1e-15
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 18 FSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSR 74
+ ++IH C+K +++ +L H + H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 75 NCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQ 113
+ LT H +H G + ++C +C++ FS L H K HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 70.0 bits (172), Expect = 9e-15
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIHQGIR- 62
+ CD C+K +++ +L H + H G + YKC C F+R LT H + H G +
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQ 86
++C +C++ FSR+ +L HM++HQ
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 68.4 bits (168), Expect = 3e-14
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 16/110 (14%)
Query: 153 FSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDL--CSKEFSR 209
+E +++H C+K Y +L H + H G + Y C C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 210 KDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQ 259
D LT H + H G ++C +C + FSR D+L H + HQ
Sbjct: 60 SDELTRHYRKHTGA----------KPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 66.9 bits (164), Expect = 1e-13
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 72 FSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNL--CSKEFSR 128
+ E H C+K ++ S L H + H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 129 NCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQ 167
+ LT H +H G + ++C +C++ FS L H K HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 65.7 bits (161), Expect = 3e-13
Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 32/126 (25%)
Query: 99 FSYKSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSY 155
+E +++H C+K ++++ +L H+ H G + YKC C F+
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 156 KSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTD 215
L H + H G + + C +C++ FSR D+L
Sbjct: 60 SDELTRHYRKHTGAK--------------------------PFQCGVCNRSFSRSDHLAL 93
Query: 216 HKKMHQ 221
H K HQ
Sbjct: 94 HMKRHQ 99
Score = 43.0 bits (102), Expect = 3e-05
Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 52/144 (36%)
Query: 568 FSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKDI 627
E + IH C+K +++ +L H++ H G +
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEK--------------- 44
Query: 628 PYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQ-----DIR 682
PY+ T + C F +L + H
Sbjct: 45 PYKCTWEG----------------------CDWRF-----ARSDELTR--HYRKHTGAKP 75
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQ 706
++C +C++ FSR D+L H + HQ
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 31.1 bits (71), Expect = 0.48
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEIHQGIR 709
YKC C F+R D LT H H G +
Sbjct: 46 YKCTWEGCDWRFARSDELTRHYRKHTGAK 74
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 87.1 bits (217), Expect = 5e-21
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
+ C +C K F R L+ H IH R Y C C K F +K ++ +H IH G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 590 LCSKKFSRKLNLTKHMKIHQG 610
+C K FS+ NL H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 84.4 bits (210), Expect = 4e-20
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
+ C +C K F R L+ H IH R Y C C K F +K ++ H IH G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 67 LCSKEFSRNCYLTEHMEQHQG 87
+C K FS++ L H +H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 84.4 bits (210), Expect = 5e-20
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
+ C +C K F R L+ H+ +H R Y C C K F +K ++ +H IH G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 348 LCSKKFSRKLNLTKHMKIHQG 368
+C K FS+ NL H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 84.4 bits (210), Expect = 5e-20
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
+ C +C K F R L+ H+ +H R Y C C K F +K ++ +H IH G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 429 LCSKKFSRKLNLTKHMKIHQG 449
+C K FS+ NL H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 83.6 bits (208), Expect = 9e-20
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
+ C +C K F R L+ H IH R Y C C K F + + +H H G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 94 LCSKDFSYKSSLIEHKKLHQG 114
+C K FS S+LI H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 80.5 bits (200), Expect = 1e-18
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
+ C +C K F S+L H +H R Y C C K F + + +H H G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 148 LCSKDFSYKSSLIEHKKLHQG 168
+C K FS S+LI H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 76.7 bits (190), Expect = 3e-17
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
+ C +C K F R L+ H+ IH R Y C C K F +K ++ KH +H G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 483 LCLKEFSRKDNLTD-RKIHQG 502
+C K FS+ NL + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 74.8 bits (185), Expect = 1e-16
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEI 257
++C +C K F R L+ H +H T+ Y C C K F +K ++ +H I
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSD--TR--------PYPCQYCGKRFHQKSDMKKHTFI 51
Query: 258 HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
H G + +KC +C K FS+ NL H + H G
Sbjct: 52 HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 72.8 bits (180), Expect = 5e-16
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
+ C +C K F R L+ H IH R Y C C K+F +K ++ KH IH G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 617 LCSKEFSRK 625
+C K FS+
Sbjct: 62 VCGKAFSQS 70
Score = 72.8 bits (180), Expect = 6e-16
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
+ C +C K F S+L H +H R Y C C K + K ++ +H +H G + + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 202 LCSKEFSRKDNLTDHKKMHQG 222
+C K FS+ NL H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 71.7 bits (177), Expect = 1e-15
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 479 YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
+ C +C K F R L+ IH R Y C C K F K ++ +H H G + +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 536 LCSKEFSRKDNLTEHKEIHQG 556
+C K FS+ NL H H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 55.9 bits (136), Expect = 5e-10
Identities = 29/128 (22%), Positives = 38/128 (29%), Gaps = 53/128 (41%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSIN 644
+ C +C K F R L+ H+ IH R Y C C K F
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFH--------------------- 40
Query: 645 VEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDNLT 699
Q + + H I +KC +C K FS+ NL
Sbjct: 41 ---------------------QKSDM-----KKHTFIHTGEKPHKCQVCGKAFSQSSNLI 74
Query: 700 EHKEIHQG 707
H H G
Sbjct: 75 THSRKHTG 82
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 86.8 bits (216), Expect = 9e-21
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDL 294
++C +C++ FSR D+LT H H G + + CD+C +KF+R +H I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 295 CSKEFSRKGNLTKHMK 310
+ S+ +L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 86.8 bits (216), Expect = 9e-21
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDL 375
++C +C++ FSR D+LT H H G + + CD+C +KF+R +H I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 376 CSKEFSRKGNLTKHMK 391
+ S+ +L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 86.8 bits (216), Expect = 9e-21
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDL 456
++C +C++ FSR D+LT H H G + + CD+C +KF+R +H I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 457 CSKEFSRKGNLTKHMK 472
+ S+ +L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 86.4 bits (215), Expect = 1e-20
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDL 590
++C +C + FSR D+LT H H G + + CD+C ++F+R D H++I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 591 CSKKFSRKLNLTKH---MKIHQG 610
+ S+ +L +K G
Sbjct: 64 VEELLSKNYHLENEVARLKKLVG 86
Score = 85.2 bits (212), Expect = 3e-20
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNL 67
++C +C + FSR +LT H + H G + + C++C ++F+R H+ I + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 68 CSKEFSRNCYLTEHM 82
+ S+N +L +
Sbjct: 64 VEELLSKNYHLENEV 78
Score = 81.0 bits (201), Expect = 8e-19
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDL 617
++C +C + FSR D+LT H H G + + CD+C +KF+R +H I + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 618 CSKEFSRK 625
+ S+
Sbjct: 64 VEELLSKN 71
Score = 80.2 bits (199), Expect = 2e-18
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDL 94
++C +C + FSR +LT H + H G + + C++C ++F+R+ H + + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 95 CSKDFSYKSSLIEHKK 110
+ S L
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 76.4 bits (189), Expect = 4e-17
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDL 148
++C +C ++FS L H + H G + + C++C ++F+R+ H + + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 149 CSKDFSYKSSLIEHKK 164
+ S L
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 75.2 bits (186), Expect = 1e-16
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKE 256
+ C +C + FSR +LT H++ H G + + CD+C ++F+R D H++
Sbjct: 4 FQCRICMRNFSRS-----------DHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52
Query: 257 IHQGIRYKCDLCSKKFSRKLNLTKH---MKIHQG 287
I + D + S+ +L +K G
Sbjct: 53 IQHILPILEDKVEELLSKNYHLENEVARLKKLVG 86
Score = 74.1 bits (183), Expect = 2e-16
Identities = 19/108 (17%), Positives = 36/108 (33%), Gaps = 28/108 (25%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCS 511
++C +C + FSR +LT H++ H G + + CD+C
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEK-------------------------PFACDICG 38
Query: 512 KEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKE---IHQG 556
++F+ H + D + S+ +L G
Sbjct: 39 RKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKKLVG 86
Score = 69.4 bits (171), Expect = 1e-14
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNL 175
++C +C + FSR+ +LT H+ H G + + CD+C + F+ H+ + + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 176 CSKEYFFKRNLTEHKK 191
+ +L
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 57.1 bits (139), Expect = 2e-10
Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 55/130 (42%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSIN 644
++C +C + FSR +LT H++ H G + + CD+C ++F+R
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR-------------------- 43
Query: 645 VEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDI----RYKCDLCSKDFSRKDNLTE 700
+ + H+DI D + S+ +L
Sbjct: 44 -------------------------SDERKR--HRDIQHILPILEDKVEELLSKNYHLEN 76
Query: 701 HKE---IHQG 707
G
Sbjct: 77 EVARLKKLVG 86
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 83.7 bits (208), Expect = 1e-19
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR---YK 587
C++C K F +L HK H G + Y C +C F RKD ++ H H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 588 CDLCSKKFSRKLNLTKHMK-IHQG 610
C C K FSR +L H+K +H G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 83.3 bits (207), Expect = 2e-19
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR---YK 64
C++C K F Y+L HK H G + Y C +C F RK ++ H + H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 65 CNLCSKEFSRNCYLTEHM 82
C C K FSR +L H+
Sbjct: 68 CQSCGKGFSRPDHLNGHI 85
Score = 82.2 bits (204), Expect = 4e-19
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YK 318
C++C K F +L +H H G + Y C +C F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 319 CDLCLKEFSRKDNLTEH-KEIHQG 341
C C K FSR D+L H K++H G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 82.2 bits (204), Expect = 4e-19
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YK 399
C++C K F +L +H H G + Y C +C F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 400 CDLCLKEFSRKDNLTEH-KEIHQG 422
C C K FSR D+L H K++H G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 82.2 bits (204), Expect = 5e-19
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YK 291
C++C K F +L HK H G + Y C +C +F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 292 CDLCSKEFSRKGNLTKHMK 310
C C K FSR +L H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 82.2 bits (204), Expect = 5e-19
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YK 372
C++C K F +L HK H G + Y C +C +F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 373 CDLCSKEFSRKGNLTKHMK 391
C C K FSR +L H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 82.2 bits (204), Expect = 5e-19
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YK 453
C++C K F +L HK H G + Y C +C +F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 454 CDLCSKEFSRKGNLTKHMK 472
C C K FSR +L H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 80.6 bits (200), Expect = 2e-18
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR---YK 91
C +C K F Y+L HK H G + Y C +C F R ++ H+ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 92 CDLCSKDFSYKSSLIEHKK 110
C C K FS L H K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 79.8 bits (198), Expect = 3e-18
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR---YK 560
C++C K F +L H H G + Y C +C F RKD ++ H H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 561 CDLCSKEFSRKDNLTEH-KEIHQG 583
C C K FSR D+L H K++H G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 78.7 bits (195), Expect = 6e-18
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YK 480
C++C K F +L +H H G + Y C +C F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 481 CDLCLKEFSRKDNLT--DRKIHQG 502
C C K FSR D+L +++H G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 76.0 bits (188), Expect = 7e-17
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR---YK 118
C +C K F +L H H G + Y C +C F K + H + H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 119 CNLCSKEFSRNCYLTEHM 136
C C K FSR +L H+
Sbjct: 68 CQSCGKGFSRPDHLNGHI 85
Score = 72.5 bits (179), Expect = 1e-15
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YK 614
C++C K F +L HK H G + Y C +C +F RK ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 615 CDLCSKEFSRK 625
C C K FSR
Sbjct: 68 CQSCGKGFSRP 78
Score = 69.1 bits (170), Expect = 2e-14
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMK 229
C +C K + +L HK H G + Y+C +C F RKD ++ H + H G++ K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-- 65
Query: 230 LHQGIRYKCDLCLKEFSRKDNLTEH-KEIHQG 260
Y C C K FSR D+L H K++H G
Sbjct: 66 ------YICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 67.9 bits (167), Expect = 4e-14
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR---YK 172
C +C K F +L H H G + Y C +C F K + H + H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 173 CNLCSKEYFFKRNLTEHKK 191
C C K + +L H K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 51.3 bits (124), Expect = 3e-08
Identities = 26/131 (19%), Positives = 37/131 (28%), Gaps = 56/131 (42%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSIN 644
C++C K F +L +H H G + Y C +C F
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFK--------------------- 46
Query: 645 VEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIR-------YKCDLCSKDFSRKDN 697
+ + H Y C C K FSR D+
Sbjct: 47 ---------------------RKDRM-----SYHVRSHDGSVGKPYICQSCGKGFSRPDH 80
Query: 698 LTEH-KEIHQG 707
L H K++H G
Sbjct: 81 LNGHIKQVHSG 91
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 81.4 bits (202), Expect = 7e-19
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 280 KHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHK 336
K H C K +++ +L H++ H G + Y CD C +F+R D LT H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 337 EIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 366
H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 81.4 bits (202), Expect = 7e-19
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 361 KHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHK 417
K H C K +++ +L H++ H G + Y CD C +F+R D LT H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 418 EIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 447
H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 80.3 bits (199), Expect = 2e-18
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 522 EHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKEFSRKDNLTEHK 578
+ H C K +++ +L H H G + Y CD C +F+R D LT H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 579 EIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 608
H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 78.0 bits (193), Expect = 1e-17
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 226 KHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHM 282
K H C K +++ +L H H G + Y CD C KF+R LT+H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 283 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 312
+ H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 78.0 bits (193), Expect = 1e-17
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 307 KHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHM 363
K H C K +++ +L H H G + Y CD C KF+R LT+H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 364 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 393
+ H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 78.0 bits (193), Expect = 1e-17
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 388 KHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHM 444
K H C K +++ +L H H G + Y CD C KF+R LT+H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 445 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 474
+ H G R ++C C + FSR +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 74.9 bits (185), Expect = 1e-16
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-Y 559
C K ++ +L H++ H G + Y CD C +F+R D LT H H G R +
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 560 KCDLCSKEFSRKDNLTEHKEIH 581
+C C + FSR D+L H + H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88
Score = 71.4 bits (176), Expect = 2e-15
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 188 EHKKLHQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDL--CLKE 244
+ H + C K +++ +L H++ H G + Y CD C +
Sbjct: 1 KRTATH---TCDYAGCGKTYTKS-----------SHLKAHLRTHTGEKPYHCDWDGCGWK 46
Query: 245 FSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 285
F+R D LT H H G R ++C C + FSR +L HMK H
Sbjct: 47 FARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 69.5 bits (171), Expect = 1e-14
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIHQGIR-YK 64
C K +++ +L H + H G + Y C+ C +F+R LT H + H G R ++
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 65 CNLCSKEFSRNCYLTEHMEQH 85
C C + FSR+ +L HM++H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRH 88
Score = 68.7 bits (169), Expect = 2e-14
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 27 HKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRNCYLTEHME 83
H C K +++ +L H + H G + Y C+ C +F+R+ LT H
Sbjct: 2 RTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 58
Query: 84 QHQGIR-YKCDLCSKDFSYKSSLIEHKKLH 112
+H G R ++C C + FS L H K H
Sbjct: 59 KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 67.2 bits (165), Expect = 7e-14
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 442 KHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTD-R 497
K H C K +++ +L H++ H G + Y CD C +F+R D LT
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQH 527
+ H G R ++C C + FS +L HMK+H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 66.8 bits (164), Expect = 9e-14
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 549 EHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTKHM 605
+ H C K +++ +L H H G + Y CD C KF+R LT+H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 606 KIHQGIR-YKCDLCSKEFSRKD 626
+ H G R ++C C + FSR D
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSD 79
Score = 65.6 bits (161), Expect = 2e-13
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 54 HKKIHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKK 110
H C K ++++ +L H+ H G + Y CD C F+ L H +
Sbjct: 2 RTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 58
Query: 111 LHQGIR-YKCNLCSKEFSRNCYLTEHMEQH 139
H G R ++C C + FSR+ +L HM++H
Sbjct: 59 KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 65.2 bits (160), Expect = 3e-13
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 84 QHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNL--CSKEFSRNCYLTEHMEQH 139
+ C K ++ S L H + H G + Y C+ C +F+R+ LT H +H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 140 QGIR-YKCDLCSKDFSYKSSLIEHKKLH 166
G R ++C C + FS L H K H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 61.0 bits (149), Expect = 9e-12
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 138 QHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNL--CSKEYFFKRNLTEHKKLH 193
+ C K ++ S L H + H G + Y C+ C ++ LT H + H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 194 QGIR-YNCDLCSKEFSRKDNLTDHKKMH 220
G R + C C + FSR D+L H K H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 36.0 bits (84), Expect = 0.007
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIH 705
++C C + FSR D+L H + H
Sbjct: 65 PFQCQKCDRAFSRSDHLALHMKRH 88
Score = 31.0 bits (71), Expect = 0.43
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEIHQGIR 709
Y CD C F+R D LT H H G R
Sbjct: 36 YHCDWDGCGWKFARSDELTRHYRKHTGHR 64
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 72.9 bits (180), Expect = 6e-16
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 222 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-----YKCDLCSKKFSRK 275
G+ + H G + Y C C K F +K L H + + + C C K F+R+
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 276 LNLTKHMKIHQGIR-YKCDLCSKEF 299
+ +H G + +
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 72.9 bits (180), Expect = 6e-16
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 303 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-----YKCDLCSKKFSRK 356
G+ + H G + Y C C K F +K L H + + + C C K F+R+
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 357 LNLTKHMKIHQGIR-YKCDLCSKEF 380
+ +H G + +
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 72.9 bits (180), Expect = 6e-16
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Query: 384 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-----YKCDLCSKKFSRK 437
G+ + H G + Y C C K F +K L H + + + C C K F+R+
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 438 LNLTKHMKIHQGIR-YKCDLCSKEF 461
+ +H G + +
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 72.2 bits (178), Expect = 9e-16
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-----YKCDLCSKEFSRKG 303
+ H G + Y C C K F +K L H K + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 304 NLTKHMKLHQGIR-YKCDLCLKEF 326
+ +H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 72.2 bits (178), Expect = 9e-16
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-----YKCDLCSKEFSRKG 384
+ H G + Y C C K F +K L H K + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 385 NLTKHMKLHQGIR-YKCDLCLKEF 407
+ +H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 72.2 bits (178), Expect = 9e-16
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-----YKCDLCSKEFSRKG 465
+ H G + Y C C K F +K L H K + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 466 NLTKHMKLHQGIR-YKCDLCLKEF 488
+ +H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 72.2 bits (178), Expect = 1e-15
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 7/84 (8%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-----YKCDLCSKKFSRKL 599
+ H G + Y C C K F +K L H + + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 600 NLTKHMKIHQGIR-YKCDLCSKEF 622
+ +H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 71.4 bits (176), Expect = 2e-15
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)
Query: 23 NLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-----YKCNLCSKEFSRNC 76
+ + H G + Y C+ C K F +K L H K + + C+ C K F+R
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 77 YLTEHMEQHQGIR-YKCDLCSKDF 99
+ H + G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 68.7 bits (169), Expect = 2e-14
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-----YKCNLCSKEFSRKYNLTDHKKIHQGIR- 62
Y C C K F +K L H K + + C+ C K F+R+ + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 63 YKCNLCSKEF 72
+
Sbjct: 76 VEGENSGPSS 85
Score = 64.9 bits (159), Expect = 4e-13
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Query: 439 NLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-----YKCDLCLKEFSRKD 492
+ + H G + Y C C K F +K L H K + + C C K F+R++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 493 NLTD-RKIHQGIR-YKCDLCSKEF 514
+ G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 63.7 bits (156), Expect = 9e-13
Identities = 18/83 (21%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Query: 78 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-----YKCNLCSKEFSRNCY 131
H G + Y C C K F K L H K + + C+ C K F+R
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 132 LTEHMEQHQGIR-YKCDLCSKDF 153
+ H + G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 62.5 bits (153), Expect = 3e-12
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR- 558
Y C C K F K L H K++ + C C K F+R++ + H + G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 559 YKCDLCSKEF 568
+ +
Sbjct: 76 VEGENSGPSS 85
Score = 61.0 bits (149), Expect = 9e-12
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 8/85 (9%)
Query: 465 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-----YKCDLCSKEFSSK 517
G+ + H G + Y C C K F +K L K + + C C K F+ +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 518 GNLTEHMKQHQGIR-YKCDLCSKEF 541
+ H G + +
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 56.0 bits (136), Expect = 5e-10
Identities = 16/83 (19%), Positives = 24/83 (28%), Gaps = 7/83 (8%)
Query: 132 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-----YKCNLCSKEYFFKRN 185
H G + Y C C K F K L H K + + C+ C K + +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 186 LTEHKKLHQGIR-YNCDLCSKEF 207
+ H G +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 53.3 bits (129), Expect = 5e-09
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-----YKCDLCSKEFSRK 625
+ H G + Y C C K F +K L H K + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Score = 52.5 bits (127), Expect = 8e-09
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 158 SLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-----YNCDLCSKEFSRKD 211
S + H G + Y C+ C K + K+ L H K + + C C K F+R++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 212 NLTDHKKMHQG 222
+ H G
Sbjct: 62 TMARHADNCAG 72
Score = 34.8 bits (81), Expect = 0.015
Identities = 17/118 (14%), Positives = 27/118 (22%), Gaps = 57/118 (48%)
Query: 600 NLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDC 658
+ + H G + Y C C K F
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFR----------------------------------- 26
Query: 659 LEFFKTEQNTTLGKLNKILHQDIR---------YKCDLCSKDFSRKDNLTEHKEIHQG 707
Q L +H + C C K F+R++ + H + G
Sbjct: 27 -------QKQLL-----DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 72.2 bits (178), Expect = 8e-16
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YKCDLCSKEFSRKGNL 305
+ H G + Y+C +C +F++ + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 306 TKHM-KLHQG 314
H+ K H
Sbjct: 62 GVHLRKQHSY 71
Score = 72.2 bits (178), Expect = 8e-16
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YKCDLCSKEFSRKGNL 386
+ H G + Y+C +C +F++ + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 387 TKHM-KLHQG 395
H+ K H
Sbjct: 62 GVHLRKQHSY 71
Score = 72.2 bits (178), Expect = 8e-16
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YKCDLCSKEFSRKGNL 467
+ H G + Y+C +C +F++ + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 468 TKHM-KLHQG 476
H+ K H
Sbjct: 62 GVHLRKQHSY 71
Score = 70.6 bits (174), Expect = 3e-15
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 277 NLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YKCDLCLKEFSRKDNL 332
+ + H G + Y+C +C F++ G + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 333 TEH-KEIHQG 341
H ++ H
Sbjct: 62 GVHLRKQHSY 71
Score = 70.6 bits (174), Expect = 3e-15
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 358 NLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YKCDLCLKEFSRKDNL 413
+ + H G + Y+C +C F++ G + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 414 TEH-KEIHQG 422
H ++ H
Sbjct: 62 GVHLRKQHSY 71
Score = 69.9 bits (172), Expect = 5e-15
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 222 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR---YKCDLCSKKFSRKLN 277
G+ + H G + Y+C +C F++ + H + C C +RK +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 278 LTKHM-KIHQG 287
L H+ K H
Sbjct: 61 LGVHLRKQHSY 71
Score = 69.9 bits (172), Expect = 5e-15
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 303 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR---YKCDLCSKKFSRKLN 358
G+ + H G + Y+C +C F++ + H + C C +RK +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 359 LTKHM-KIHQG 368
L H+ K H
Sbjct: 61 LGVHLRKQHSY 71
Score = 69.9 bits (172), Expect = 5e-15
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 384 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR---YKCDLCSKKFSRKLN 439
G+ + H G + Y+C +C F++ + H + C C +RK +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 440 LTKHM-KIHQG 449
L H+ K H
Sbjct: 61 LGVHLRKQHSY 71
Score = 69.5 bits (171), Expect = 6e-15
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 439 NLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR---YKCDLCLKEFSRKDNL 494
+ + H G + Y+C +C F++ G + H+ + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 495 TD--RKIHQG 502
RK H
Sbjct: 62 GVHLRKQHSY 71
Score = 67.5 bits (166), Expect = 3e-14
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 518 GNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR---YKCDLCSKEFSRKDN 573
G+ + H G + Y+C +C F++ + H + C C +RK +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 574 LTEH-KEIHQG 583
L H ++ H
Sbjct: 61 LGVHLRKQHSY 71
Score = 67.5 bits (166), Expect = 3e-14
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR---YKCDLCSKKFSRKLNL 601
+ H G + Y+C +C F++ + H + C C +RK +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 602 TKHM-KIHQG 610
H+ K H
Sbjct: 62 GVHLRKQHSY 71
Score = 64.1 bits (157), Expect = 5e-13
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Query: 23 NLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR---YKCNLCSKEFSRNCYL 78
+ + H G + Y+C +C F++ + H + C C +R L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 79 TEHM 82
H+
Sbjct: 62 GVHL 65
Score = 62.2 bits (152), Expect = 3e-12
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR---YKCDLCSKEFSRKDNLTEH-KEIHQG 556
Y+C +C F+ G + H+ Q + C C +RK +L H ++ H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 60.6 bits (148), Expect = 1e-11
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR---YKCNLCSKEFSRKYNLTDH-KKIHQG 60
Y+C +C F++ + H + C C +RK +L H +K H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 60.2 bits (147), Expect = 1e-11
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 50 NLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR---YKCDLCSKDFSYKSSL 105
+ + H G + Y+C +C F+++ + H+ Q + C C + KS L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 106 IEH-KKLHQG 114
H +K H
Sbjct: 62 GVHLRKQHSY 71
Score = 59.8 bits (146), Expect = 2e-11
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR---YKCDLCSKEFSRKD 626
+ H G + Y+C +C +F++ + H+ + C C +RK
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59
Score = 57.9 bits (141), Expect = 8e-11
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 185 NLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLK 243
+ + H G + Y C +C F++ + H ++ C C
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA--------KFHCPHCDT 53
Query: 244 EFSRKDNLTEH-KEIHQG 260
+RK +L H ++ H
Sbjct: 54 VIARKSDLGVHLRKQHSY 71
Score = 57.9 bits (141), Expect = 8e-11
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Query: 78 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR---YKCNLCSKEFSRNCYLT 133
H G + Y+C +C F+ ++ H + C C +R L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 134 EHM 136
H+
Sbjct: 63 VHL 65
Score = 57.1 bits (139), Expect = 2e-10
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 104 SLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR---YKCDLCSKDFSYKSSL 159
S + H G + Y+C +C F+++ + H+ Q + C C + KS L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 160 IEH-KKLHQG 168
H +K H
Sbjct: 62 GVHLRKQHSY 71
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 26/93 (27%)
Query: 132 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHK 190
H G + Y+C +C F+ ++ H E+
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-------------------ENV 43
Query: 191 KLHQGIRYNCDLCSKEFSRKDNLTDH-KKMHQG 222
+++C C +RK +L H +K H
Sbjct: 44 A-----KFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/110 (13%), Positives = 29/110 (26%), Gaps = 42/110 (38%)
Query: 600 NLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDC 658
+ + H G + Y+C +C F++ G
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQS------------------------GT------- 30
Query: 659 LEFFKTEQNTTLGKLNKILHQDIRYKCDLCSKDFSRKDNLTEH-KEIHQG 707
K + ++ C C +RK +L H ++ H
Sbjct: 31 ---MKMHILQKHTENVA------KFHCPHCDTVIARKSDLGVHLRKQHSY 71
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 72.1 bits (178), Expect = 9e-16
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 307
+ H + + YKCD C F K NL H +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 308 HMKLHQG 314
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 72.1 bits (178), Expect = 9e-16
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 388
+ H + + YKCD C F K NL H +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 389 HMKLHQG 395
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 72.1 bits (178), Expect = 9e-16
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 469
+ H + + YKCD C F K NL H +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 470 HMKLHQG 476
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 72.1 bits (178), Expect = 9e-16
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 603
+ H + + YKCD C F K NL HK +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 604 HMKIHQG 610
H +IH G
Sbjct: 64 HTRIHSG 70
Score = 70.6 bits (174), Expect = 3e-15
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 23 NLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTE 80
+ H + + YKC+ C F K NL HK +H G + Y+CN+C +F+R L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 81 HMEQHQG 87
H H G
Sbjct: 64 HTRIHSG 70
Score = 68.6 bits (169), Expect = 1e-14
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 519 NLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTE 576
+ H + YKCD C F K NL HK +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 577 HKEIHQG 583
H IH G
Sbjct: 64 HTRIHSG 70
Score = 68.6 bits (169), Expect = 1e-14
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 223 NLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 280
+ H + + YKCD C F K NL HK +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 281 HMKIHQG 287
H +IH G
Sbjct: 64 HTRIHSG 70
Score = 68.6 bits (169), Expect = 1e-14
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 304 NLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 361
+ H + + YKCD C F K NL HK +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 362 HMKIHQG 368
H +IH G
Sbjct: 64 HTRIHSG 70
Score = 68.6 bits (169), Expect = 1e-14
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 385 NLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 442
+ H + + YKCD C F K NL HK +H G + Y+C++C +F+R NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 443 HMKIHQG 449
H +IH G
Sbjct: 64 HTRIHSG 70
Score = 66.7 bits (164), Expect = 6e-14
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
YKCD C F K NL HK +H G + Y+CN+C +F+R NL H +IH G
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70
Score = 65.6 bits (161), Expect = 2e-13
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 103 SSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLI 160
H + + YKC+ C F L H H G + Y+C++C F+ ++L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 161 EHKKLHQG 168
H ++H G
Sbjct: 63 THTRIHSG 70
Score = 63.2 bits (155), Expect = 1e-12
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 77 YLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTE 134
+ H + YKCD C F YK +L HK +H G + Y+CN+C +F+R L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 135 HMEQHQG 141
H H G
Sbjct: 64 HTRIHSG 70
Score = 60.9 bits (149), Expect = 6e-12
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQ 555
+ + YKCD C F KGNL H H G + Y+C++C +F+R NL H IH
Sbjct: 10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69
Query: 556 G 556
G
Sbjct: 70 G 70
Score = 59.0 bits (144), Expect = 4e-11
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 131 YLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTE 188
+ H + YKCD C F YK +L HK +H G + Y+CN+C ++ NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 189 HKKLHQG 195
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 59.0 bits (144), Expect = 4e-11
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 185 NLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLK 243
+ H + + Y CD C F K NL HK +H G K Y+C++C
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE-----KP-----YRCNICGA 53
Query: 244 EFSRKDNLTEHKEIHQG 260
+F+R NL H IH G
Sbjct: 54 QFNRPANLKTHTRIHSG 70
Score = 58.2 bits (142), Expect = 7e-11
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
+ H + + YKCD C F K NL H +H G + Y+C++C +F+R
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58
Score = 55.9 bits (136), Expect = 4e-10
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 466 NLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTE 522
+ H + + YKCD C F K NL + +H G + Y+C++C +F+ NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 523 HMKQHQG 529
H + H G
Sbjct: 64 HTRIHSG 70
Score = 40.9 bits (97), Expect = 9e-05
Identities = 20/114 (17%), Positives = 29/114 (25%), Gaps = 53/114 (46%)
Query: 600 NLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDC 658
+ H + + YKCD C F
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFR----------------------------------- 28
Query: 659 LEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDNLTEHKEIHQG 707
L H+ + Y+C++C F+R NL H IH G
Sbjct: 29 -------YKGNL-----ASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 69.4 bits (171), Expect = 7e-15
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
KC CS S K L H +IH R +KC+ CS + + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 69.4 bits (171), Expect = 7e-15
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
KC CS S K L H +IH R +KC+ CS + + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 69.4 bits (171), Expect = 7e-15
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
KC CS S K L H +IH R +KC+ CS + + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 66.0 bits (162), Expect = 9e-14
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
KC CS S K L H+ IH R +KC+ CS + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 64.1 bits (157), Expect = 4e-13
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
KC CS S K L H++IH R +KCN CS + + NL+ H K G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 64.1 bits (157), Expect = 5e-13
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
KC C S K L H+ IH R +KC+ CS + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 64.1 bits (157), Expect = 5e-13
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
KC C S K L H+ IH R +KC+ CS + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 64.1 bits (157), Expect = 5e-13
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
KC C S K L H+ IH R +KC+ CS + NL+KHMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 61.7 bits (151), Expect = 3e-12
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
KC CS SSK L H + H R +KC+ CS + + NL++H + G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 60.2 bits (147), Expect = 1e-11
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
KC+ CS S L H H R +KC+ CS D S+L +H K G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 60.2 bits (147), Expect = 1e-11
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
KC+ CS S L H H R +KC+ CS D S+L +H K G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 54.0 bits (131), Expect = 2e-09
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 25/78 (32%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCS 511
KC CS S K L H ++H R +KC+ CS
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDR-------------------------PFKCNYCS 44
Query: 512 KEFSSKGNLTEHMKQHQG 529
+ NL++HMK+ G
Sbjct: 45 FDTKQPSNLSKHMKKFHG 62
Score = 52.9 bits (128), Expect = 4e-09
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
KC CS S K L H +IH R +KC+ CS + +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQP 50
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKE 256
C CS S K L H ++H R +KC+ C + + NL++H +
Sbjct: 10 EKCSECSYSCSSK-----------AALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Query: 257 IHQG 260
G
Sbjct: 59 KFHG 62
Score = 49.4 bits (119), Expect = 6e-08
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
KC+ CS K L H+++H R + C+ CS + + NL+ H K G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 37.1 bits (87), Expect = 0.001
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC+ CS D + NL++H + G
Sbjct: 38 FKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 34.8 bits (81), Expect = 0.010
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
KC CS S K L H+ IH
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCT 34
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 69.0 bits (170), Expect = 8e-15
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 547 LTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKH 604
+ IH G + Y C C K FSR L +H+ +H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 605 MKIHQG 610
+IH
Sbjct: 62 QRIHTS 67
Score = 67.5 bits (166), Expect = 3e-14
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 24 LTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEH 81
+ IH G + Y C C K FSR L H+++H G + YKC C K FS+N L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 82 MEQHQG 87
H
Sbjct: 62 QRIHTS 67
Score = 67.5 bits (166), Expect = 4e-14
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 251 LTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKH 308
+ IH G + Y C C K FSR L +H ++H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 309 MKLHQG 314
++H
Sbjct: 62 QRIHTS 67
Score = 67.5 bits (166), Expect = 4e-14
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 332 LTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKH 389
+ IH G + Y C C K FSR L +H ++H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 390 MKLHQG 395
++H
Sbjct: 62 QRIHTS 67
Score = 67.5 bits (166), Expect = 4e-14
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 413 LTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKH 470
+ IH G + Y C C K FSR L +H ++H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 471 MKLHQG 476
++H
Sbjct: 62 QRIHTS 67
Score = 66.7 bits (164), Expect = 5e-14
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 51 LTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEH 108
+ IH G + Y C C K FSR+ L +H H G + YKC C K FS S LI H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 109 KKLHQG 114
+++H
Sbjct: 62 QRIHTS 67
Score = 66.0 bits (162), Expect = 1e-13
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 224 LTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKH 281
+ +H G + Y C C K FSR L +H+ +H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 282 MKIHQG 287
+IH
Sbjct: 62 QRIHTS 67
Score = 66.0 bits (162), Expect = 1e-13
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 305 LTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKH 362
+ +H G + Y C C K FSR L +H+ +H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 363 MKIHQG 368
+IH
Sbjct: 62 QRIHTS 67
Score = 66.0 bits (162), Expect = 1e-13
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 386 LTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKH 443
+ +H G + Y C C K FSR L +H+ +H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 444 MKIHQG 449
+IH
Sbjct: 62 QRIHTS 67
Score = 65.6 bits (161), Expect = 1e-13
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 520 LTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEH 577
+ H G + Y C C K FSR L +H+ +H G + YKC C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 578 KEIHQG 583
+ IH
Sbjct: 62 QRIHTS 67
Score = 64.8 bits (159), Expect = 3e-13
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 105 LIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEH 162
+H G + Y C C K FSR+ L +H H G + YKC C K FS S LI H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 163 KKLHQG 168
+++H
Sbjct: 62 QRIHTS 67
Score = 64.0 bits (157), Expect = 5e-13
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 4 HQGI-----GYKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKI 57
GI Y C C K FSR L H+++H G + YKC C K FS+ L +H++I
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64
Query: 58 HQG 60
H
Sbjct: 65 HTS 67
Score = 58.3 bits (142), Expect = 6e-11
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIH 554
IH G + Y C C K FS L +H + H G + YKC C K FS+ L H+ IH
Sbjct: 6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Query: 555 QG 556
Sbjct: 66 TS 67
Score = 56.3 bits (137), Expect = 3e-10
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 186 LTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKE 244
+ +H G + Y C C K FSR L H+++H G K YKC C K
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE--K--------PYKCLECGKA 51
Query: 245 FSRKDNLTEHKEIHQG 260
FS+ L H+ IH
Sbjct: 52 FSQNSGLINHQRIHTS 67
Score = 55.9 bits (136), Expect = 4e-10
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 574 LTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
+ IH G + Y C C K FSR L +H ++H G + YKC C K FS+
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQN 55
Score = 55.6 bits (135), Expect = 6e-10
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 159 LIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDH 216
+H G + Y C C K + L +H+++H G + Y C C K FS+ L +H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 217 KKMHQG 222
+++H
Sbjct: 62 QRIHTS 67
Score = 52.9 bits (128), Expect = 5e-09
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 467 LTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNLTEH 523
+ +H G + Y C C K FSR L +++H G + YKC C K FS L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 524 MKQHQG 529
+ H
Sbjct: 62 QRIHTS 67
Score = 39.8 bits (94), Expect = 2e-04
Identities = 23/113 (20%), Positives = 32/113 (28%), Gaps = 53/113 (46%)
Query: 601 LTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDCL 659
+ IH G + Y C C K FS
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFS------------------------------------ 25
Query: 660 EFFKTEQNTTLGKLNKILHQDI-----RYKCDLCSKDFSRKDNLTEHKEIHQG 707
+++ L + HQ + YKC C K FS+ L H+ IH
Sbjct: 26 ------RSSIL-----VQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 69.4 bits (170), Expect = 1e-14
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR----YKCDLCSKEFSRKGNLTKHMKLH 312
+C++C +K +L H + H + C+ C K F + ++ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 69.4 bits (170), Expect = 1e-14
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR----YKCDLCSKEFSRKGNLTKHMKLH 393
+C++C +K +L H + H + C+ C K F + ++ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 69.4 bits (170), Expect = 1e-14
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR----YKCDLCSKEFSRKGNLTKHMKLH 474
+C++C +K +L H + H + C+ C K F + ++ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 65.1 bits (159), Expect = 3e-13
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR----YKCDLCSKEFSRKDNLTEHKEIH 554
+C++C K +L H ++H + C+ C K F + D++ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 64.7 bits (158), Expect = 3e-13
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR----YKCDLCSKKFSRKLNLTKHMKIH 608
+C++C +K +L H+ H + C+ C K+F + ++ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 64.7 bits (158), Expect = 4e-13
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQGIR----YKCDLCLKEFSRKDNLTEHKEI-HQGIRY 344
+C++C +K +L H + H + C+ C K F + D++ H+ H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 345 KCDLCSKKFS 354
S S
Sbjct: 68 APQESSGPSS 77
Score = 64.7 bits (158), Expect = 4e-13
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQGIR----YKCDLCLKEFSRKDNLTEHKEI-HQGIRY 425
+C++C +K +L H + H + C+ C K F + D++ H+ H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 426 KCDLCSKKFS 435
S S
Sbjct: 68 APQESSGPSS 77
Score = 62.8 bits (153), Expect = 2e-12
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR----YKCNLCSKEFSRKYNLTDHKKIH 58
+C++C +K +L H++ H + C C K F + ++ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 59.0 bits (143), Expect = 4e-11
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIR----YKCDLCLKEFSRKDNLTD--RKIHQGIRY 505
+C++C +K +L H + H + C+ C K F + D++ K H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 506 KCDLCSKEFS 515
S S
Sbjct: 68 APQESSGPSS 77
Score = 55.9 bits (135), Expect = 4e-10
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQGIR----YKCDLCSKDFSYKSSLIEHKKLH 112
+C +C + L H +H + C+ C K F S+ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 55.9 bits (135), Expect = 4e-10
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR----YKCDLCSKDFSYKSSLIEHKKLH 166
+C +C + L H +H + C+ C K F S+ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 55.5 bits (134), Expect = 6e-10
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEI 257
C++C +K +L H++ H + R+ C+ C K F + D++ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAAL-------RFPCEFCGKRFEKPDSVAAHRSK 60
Query: 258 -HQGIRYKCDLCSKKFS 273
H + S S
Sbjct: 61 SHPALLLAPQESSGPSS 77
Score = 54.7 bits (132), Expect = 1e-09
Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR----YKCDLCSKEFSRKD 626
+C++C +K +L H + H + C+ C K F + D
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPD 52
Score = 52.0 bits (125), Expect = 1e-08
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR----YNCDLCSKEFSRKDNLTDHKKMH 220
+C +C K +L H++ H + C+ C K F + D++ H+
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 38.5 bits (90), Expect = 5e-04
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIH 705
+ C+ C K F + D++ H+
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKS 61
Score = 34.7 bits (80), Expect = 0.013
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIH 705
+C++C +K +L H+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKH 30
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 68.3 bits (168), Expect = 1e-14
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKI--HQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGI 477
Y+C +CS+ ++ N +H + ++ Y C C KEF+RK N+T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 66.4 bits (163), Expect = 7e-14
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEI--HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGI 611
Y+C +CS+ ++ N H + ++ Y C C K+F+RK N+T H+KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 64.9 bits (159), Expect = 2e-13
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 505 YKCDLCSKEFSSKGNLTEHM--KQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGI 557
Y+C +CS+ ++ N H + ++ Y C C KEF+RKDN+T H +I I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 64.5 bits (158), Expect = 3e-13
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKI--HQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGI 61
Y+C +CS+ ++ N H + ++ Y C C KEF+RK N+T H KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 63.3 bits (155), Expect = 7e-13
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEI--HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGI 288
Y+C +C + ++ N H + ++ Y C C K+F+RK N+T H+KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 63.3 bits (155), Expect = 7e-13
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEI--HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGI 369
Y+C +C + ++ N H + ++ Y C C K+F+RK N+T H+KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 63.3 bits (155), Expect = 7e-13
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEI--HQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGI 450
Y+C +C + ++ N H + ++ Y C C K+F+RK N+T H+KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 61.0 bits (149), Expect = 6e-12
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 28 KKIHQGIR-YKCNLCSKEFSRKYNLTDHKKI--HQGIR-YKCNLCSKEFSRNCYLTEHME 83
+ +G Y+C +CS+ ++ N H + ++ Y C C KEF+R +T H++
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 84 QHQGI 88
I
Sbjct: 62 IIHKI 66
Score = 59.1 bits (144), Expect = 2e-11
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 452 YKCDLCSKEFSRKGNLTKHM--KLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGI 503
Y+C +CS+ ++ N +H + ++ Y C C KEF+RKDN+T KI I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 57.6 bits (140), Expect = 8e-11
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 90 YKCDLCSKDFSYKSSLIEHK--KLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGI 142
Y+C +CS+ +++ S+ H + ++ Y C C KEF+R +T H++ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 56.4 bits (137), Expect = 2e-10
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 117 YKCNLCSKEFSRNCYLTEHM--EQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGI 169
Y+C +CS+ ++ H + ++ Y C C K+F+ K ++ H K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 55.6 bits (135), Expect = 4e-10
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 14/67 (20%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHM--KLHQGIR-YKCDLCLKEFSRKDNLTEH 254
Y C +CS+ ++ H N +H + ++ Y C C KEF+RKDN+T H
Sbjct: 11 YRCKVCSRVYT-----------HISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59
Query: 255 KEIHQGI 261
+I I
Sbjct: 60 VKIIHKI 66
Score = 52.9 bits (128), Expect = 4e-09
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKI--HQGIR-YKCDLCSKEFSRKD 626
Y+C +CS+ ++ N +H + ++ Y C C KEF+RKD
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKD 54
Score = 52.6 bits (127), Expect = 5e-09
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 171 YKCNLCSKEYFFKRNLTEHK--KLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y+C +CS+ Y N H + ++ Y C C KEF+RKDN+T H K+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 50.2 bits (121), Expect = 4e-08
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 144 YKCDLCSKDFSYKSSLIEHK--KLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGI 196
Y+C +CS+ +++ S+ H + ++ Y C C KE+ K N+T H K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 40.6 bits (96), Expect = 8e-05
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGI 708
Y C C K+F+RKDN+T H +I I
Sbjct: 41 YPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 32.1 bits (74), Expect = 0.075
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIH 705
Y+C +CS+ ++ N H
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTS 33
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 68.2 bits (168), Expect = 2e-14
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTK 603
+ + + R YKCD C K FS +L++H+ H G + YKCD C K F ++ +L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 604 HMKIHQG 610
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 68.2 bits (168), Expect = 2e-14
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 516 SKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDN 573
S G+ Q + R YKCD C K FS +L++H+ H G + YKCD C K F ++ +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 574 LTEHKEIHQG 583
L H +H G
Sbjct: 62 LIGHHRVHTG 71
Score = 67.9 bits (167), Expect = 3e-14
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 220 HQGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLN 277
G+ + + R YKCD C K FS +L++H+ H G + YKCD C K F ++ +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 278 LTKHMKIHQG 287
L H ++H G
Sbjct: 62 LIGHHRVHTG 71
Score = 67.1 bits (165), Expect = 5e-14
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 307
+ + + R YKCD C K FS +L+KH + H G + YKCD C K F ++ +L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 308 HMKLHQG 314
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 67.1 bits (165), Expect = 5e-14
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 388
+ + + R YKCD C K FS +L+KH + H G + YKCD C K F ++ +L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 389 HMKLHQG 395
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 67.1 bits (165), Expect = 5e-14
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTK 469
+ + + R YKCD C K FS +L+KH + H G + YKCD C K F ++ +L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 470 HMKLHQG 476
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 66.7 bits (164), Expect = 7e-14
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 23 NLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTE 80
+ + + R YKC+ C K FS +L+ H++ H G + YKC+ C K F + +L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 81 HMEQHQG 87
H H G
Sbjct: 65 HHRVHTG 71
Score = 66.7 bits (164), Expect = 7e-14
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 302 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNL 359
G+ + + R YKCD C K FS +L++H+ H G + YKCD C K F ++ +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 360 TKHMKIHQG 368
H ++H G
Sbjct: 63 IGHHRVHTG 71
Score = 66.7 bits (164), Expect = 7e-14
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 383 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNL 440
G+ + + R YKCD C K FS +L++H+ H G + YKCD C K F ++ +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 441 TKHMKIHQG 449
H ++H G
Sbjct: 63 IGHHRVHTG 71
Score = 66.3 bits (163), Expect = 9e-14
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 102 KSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSL 159
S + + R YKC+ C K FS + L++H H G + YKCD C K F +S L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 160 IEHKKLHQG 168
I H ++H G
Sbjct: 63 IGHHRVHTG 71
Score = 63.2 bits (155), Expect = 1e-12
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
YKCD C K FS +L+ H++ H G + YKC+ C K F ++ +L H ++H G
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71
Score = 59.4 bits (145), Expect = 2e-11
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 78 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEH 135
Q + R YKCD C K FS+ S L +H++ H G + YKC+ C K F + +L H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 136 MEQHQG 141
H G
Sbjct: 66 HRVHTG 71
Score = 57.1 bits (139), Expect = 2e-10
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIH 554
+ R YKCD C K FS +L++H + H G + YKCD C K F ++ +L H +H
Sbjct: 10 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
Query: 555 QG 556
G
Sbjct: 70 TG 71
Score = 56.7 bits (138), Expect = 2e-10
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 185 NLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLK 243
+ + + R Y CD C K FS +L+ H++ H G K YKCD C K
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-----EKP-----YKCDECGK 54
Query: 244 EFSRKDNLTEHKEIHQG 260
F ++ +L H +H G
Sbjct: 55 AFIQRSHLIGHHRVHTG 71
Score = 56.3 bits (137), Expect = 4e-10
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
+ + + R YKCD C K FS +L+KH + H G + YKCD C K F ++
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59
Score = 55.5 bits (135), Expect = 6e-10
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 132 LTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEH 189
Q + R YKCD C K FS+ S L +H++ H G + YKC+ C K + + +L H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 190 KKLHQG 195
++H G
Sbjct: 66 HRVHTG 71
Score = 54.0 bits (131), Expect = 2e-09
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 464 KGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCSKEFSSKGNL 520
G+ + + R YKCD C K FS +L+ R+ H G + YKCD C K F + +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 521 TEHMKQHQG 529
H + H G
Sbjct: 63 IGHHRVHTG 71
Score = 40.1 bits (95), Expect = 2e-04
Identities = 22/114 (19%), Positives = 32/114 (28%), Gaps = 53/114 (46%)
Query: 600 NLTKHMKIHQGIR-YKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNGNDAVTRDC 658
+ + + R YKCD C K FS
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFS----------------------------------- 29
Query: 659 LEFFKTEQNTTLGKLNKILHQDIR-----YKCDLCSKDFSRKDNLTEHKEIHQG 707
++ L H+ YKCD C K F ++ +L H +H G
Sbjct: 30 -------HSSDL-----SKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 68.0 bits (167), Expect = 3e-14
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 236 YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR- 289
Y C C K F + + L H+ H Y+C C K+FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 290 YKCDLCSKEFSRKGNLTKHMK 310
K D CS KH+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 68.0 bits (167), Expect = 3e-14
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 317 YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR- 370
Y C C K F + + L H+ H Y+C C K+FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 371 YKCDLCSKEFSRKGNLTKHMK 391
K D CS KH+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 68.0 bits (167), Expect = 3e-14
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 398 YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR- 451
Y C C K F + + L H+ H Y+C C K+FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 452 YKCDLCSKEFSRKGNLTKHMK 472
K D CS KH+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 66.9 bits (164), Expect = 8e-14
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 532 YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR- 585
Y C C K F + + L H+ H Y+C C K FS L H+++H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 586 YKCDLCSKKFSRKLNLTKHMK 606
K D CS KH+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 64.2 bits (157), Expect = 6e-13
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 505 YKCDL--CSKEFSSKGNLTEHMKQHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR- 558
Y C C K F L H H Y+C C K FS L H+++H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 559 YKCDLCSKEFSRKDNLTEH-KEIH 581
K D CS +H E H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 64.2 bits (157), Expect = 8e-13
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 263 YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR- 316
Y C C K F + L H H Y+C C K FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 317 YKCDLCLKEFSRKDNLTEH-KEIH 339
K D C +H E H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 64.2 bits (157), Expect = 8e-13
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 344 YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR- 397
Y C C K F + L H H Y+C C K FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 398 YKCDLCLKEFSRKDNLTEH-KEIH 420
K D C +H E H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 63.8 bits (156), Expect = 9e-13
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCN--LCSKEFSRKYNLTDHKKIHQGIR- 62
Y C C K F + L H+ H Y+C C K FS L H+K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 63 YKCNLCSKEFSRNCYLTEHM 82
K + CS +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHV 81
Score = 61.1 bits (149), Expect = 9e-12
Identities = 23/84 (27%), Positives = 28/84 (33%), Gaps = 8/84 (9%)
Query: 425 YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR- 478
Y C C K F + L H H Y+C C K FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 479 YKCDLCLKEFSRKDNLTD--RKIH 500
K D C + H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 61.1 bits (149), Expect = 9e-12
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 559 YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR- 612
Y C C K F + + L H+ H Y+C C K+FS L +H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 613 YKCDLCSKEFSRKD 626
K D CS
Sbjct: 62 KKDDSCSFVGKTWT 75
Score = 58.0 bits (141), Expect = 9e-11
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 63 YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR- 116
Y C+ C K F ++ L H H Y+C C K FS S L H+K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 117 YKCNLCSKEFSRNCYLTEHM 136
K + CS +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHV 81
Score = 54.2 bits (131), Expect = 2e-09
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 117 YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR- 170
Y C+ C K F ++ L H H Y+C C K FS S L H+K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQ 194
K + CS K T + K
Sbjct: 62 KKDDSCSF--VGKT-WTLYLKHVA 82
Score = 50.3 bits (121), Expect = 5e-08
Identities = 24/94 (25%), Positives = 30/94 (31%), Gaps = 16/94 (17%)
Query: 171 YKCNL--CSKEYFFKRNLTEHKKLHQGIR-YNCD--LCSKEFSRKDNLTDHKKMHQGNLT 225
Y C+ C K + L H+ H Y C C K FS L H+K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY-- 59
Query: 226 KHMKLHQGIRYKCDLCLKEFSRKDNLTEH-KEIH 258
K D C +H E H
Sbjct: 60 --------PCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 44.5 bits (106), Expect = 5e-06
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 9 YKCD--LCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDH-KKIH 58
Y+C C K FS L H+K+H G K + CS H + H
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 30.7 bits (70), Expect = 0.51
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 683 YKCD--LCSKDFSRKDNLTEHKEIHQGIR 709
Y+C C K FS L H+++H G
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 67.3 bits (165), Expect = 4e-14
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 244 EFSRKDNLTEHKEIHQGIRYKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFS 300
E +NL + Y C + C ++FSR LT+H++IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 301 RKGNLTKHMKLH 312
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 67.3 bits (165), Expect = 4e-14
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 325 EFSRKDNLTEHKEIHQGIRYKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFS 381
E +NL + Y C + C ++FSR LT+H++IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 382 RKGNLTKHMKLH 393
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 67.3 bits (165), Expect = 4e-14
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 406 EFSRKDNLTEHKEIHQGIRYKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFS 462
E +NL + Y C + C ++FSR LT+H++IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 463 RKGNLTKHMKLH 474
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 66.9 bits (164), Expect = 6e-14
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 540 EFSRKDNLTEHKEIHQGIRYKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFS 596
E +NL + Y C + C + FSR D LT H IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 597 RKLNLTKHMKIH 608
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 66.9 bits (164), Expect = 6e-14
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 298 EFSRKGNLTKHMKLHQGIRYKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFS 354
E NL ++ Y C + C + FSR D LT H IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 355 RKLNLTKHMKIH 366
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 66.9 bits (164), Expect = 6e-14
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 379 EFSRKGNLTKHMKLHQGIRYKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFS 435
E NL ++ Y C + C + FSR D LT H IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 436 RKLNLTKHMKIH 447
R +LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 64.6 bits (158), Expect = 3e-13
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 513 EFSSKGNLTEHMKQHQGIRYKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFS 569
E NL ++ Y C + C + FSR D LT H IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 570 RKDNLTEHKEIH 581
R D+LT H H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 62.7 bits (153), Expect = 1e-12
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 221 QGNLTKHMKLHQGIRYKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLN 277
NL ++ Y C + C + FSR D LT H IH G + ++C +C + FSR +
Sbjct: 6 MNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 278 LTKHMKIH 285
LT H++ H
Sbjct: 65 LTTHIRTH 72
Score = 62.3 bits (152), Expect = 2e-12
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 271 KFSRKLNLTKHMKIHQGIRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFS 327
+ NL ++ Y C + C + FSR LT+H+++H G + ++C +C++ FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 328 RKDNLTEHKEIH 339
R D+LT H H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 62.3 bits (152), Expect = 2e-12
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 352 KFSRKLNLTKHMKIHQGIRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFS 408
+ NL ++ Y C + C + FSR LT+H+++H G + ++C +C++ FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 409 RKDNLTEHKEIH 420
R D+LT H H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 57.7 bits (140), Expect = 8e-11
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 487 EFSRKDNLTDRKIHQGIR-YKCDL--CSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFS 542
E +NL + +R Y C + C + FS LT H++ H G + ++C +C + FS
Sbjct: 2 EPHPMNNLL-NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 543 RKDNLTEHKEIH 554
R D+LT H H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 56.9 bits (138), Expect = 2e-10
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 17 EFSRKYNLTDHKKIHQGIRYKCNL--CSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFS 73
E NL ++ Y C + C + FSR LT H +IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 74 RNCYLTEHMEQH 85
R+ +LT H+ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 56.5 bits (137), Expect = 2e-10
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 433 KFSRKLNLTKHMKIHQGIRYKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFS 489
+ NL ++ Y C + C + FSR LT+H+++H G + ++C +C++ FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 490 RKDNLTD-RKIH 500
R D+LT + H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 54.6 bits (132), Expect = 1e-09
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 567 EFSRKDNLTEHKEIHQGIRYKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFS 623
E +NL + Y C + C ++FSR LT+H++IH G + ++C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 624 RKD 626
R D
Sbjct: 61 RSD 63
Score = 53.8 bits (130), Expect = 2e-09
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIH 58
Y C + C + FSR LT H +IH G + ++C +C + FSR +LT H + H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 51.5 bits (124), Expect = 1e-08
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 185 NLTEHKKLHQGIRYNCDL--CSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLC 241
NL + Y C + C + FSR D LT +H+++H G + ++C +C
Sbjct: 8 NLLNYVVPKMR-PYACPVESCDRRFSRSDELT-----------RHIRIHTGQKPFQCRIC 55
Query: 242 LKEFSRKDNLTEHKEIH 258
++ FSR D+LT H H
Sbjct: 56 MRNFSRSDHLTTHIRTH 72
Score = 49.2 bits (118), Expect = 1e-07
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 117 YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLH 166
Y C + C + FSR+ LT H+ H G + ++C +C ++FS L H + H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 48.8 bits (117), Expect = 1e-07
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 29/98 (29%)
Query: 44 EFSRKYNLTDHKKIHQGIRYKCNL--CSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSY 101
E NL ++ Y C + C + FSR+ LT H+ H G +
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQK------------ 48
Query: 102 KSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQH 139
++C +C + FSR+ +LT H+ H
Sbjct: 49 --------------PFQCRICMRNFSRSDHLTTHIRTH 72
Score = 46.9 bits (112), Expect = 6e-07
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 171 YKCNL--CSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMH 220
Y C + C + + LT H ++H G + + C +C + FSR D+LT H + H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 36.5 bits (85), Expect = 0.003
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIH 705
++C +C ++FSR D+LT H H
Sbjct: 49 PFQCRICMRNFSRSDHLTTHIRTH 72
Score = 32.3 bits (74), Expect = 0.095
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEIHQGIR 709
Y C + C + FSR D LT H IH G +
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQK 48
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 66.3 bits (161), Expect = 3e-13
Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 20/122 (16%)
Query: 408 SRKDNLTEHKEIHQG-IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGN 466
S + + I G +++C CS + + LT HM R ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 467 LTKHMKLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHMKQ 526
+ L + + K KC C F S +L+ HM +
Sbjct: 62 KPRKRSLLEM-------------------EGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102
Query: 527 HQ 528
+
Sbjct: 103 TK 104
Score = 64.4 bits (156), Expect = 2e-12
Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 8/103 (7%)
Query: 46 SRKYNLTDHKKIHQG-IRYKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSS 104
S + + I G +++C CS + LT HM + R + + S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 105 LIEHKKLHQGIR-------YKCNLCSKEFSRNCYLTEHMEQHQ 140
+ L + KC C F L+ HM + +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 63.2 bits (153), Expect = 3e-12
Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 23/121 (19%)
Query: 246 SRKDNLTEHKEIHQG-IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGN 304
S + + I G +++C CS + + LT HM R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP---- 57
Query: 305 LTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM 363
RK +L E + + KC C F +L+ HM
Sbjct: 58 -----------------KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Query: 364 K 364
Sbjct: 101 I 101
Score = 63.2 bits (153), Expect = 3e-12
Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 23/121 (19%)
Query: 327 SRKDNLTEHKEIHQG-IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGN 385
S + + I G +++C CS + + LT HM R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP---- 57
Query: 386 LTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM 444
RK +L E + + KC C F +L+ HM
Sbjct: 58 -----------------KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Query: 445 K 445
Sbjct: 101 I 101
Score = 61.3 bits (148), Expect = 2e-11
Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 515 SSKGNLTEHMKQHQG-IRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKE------ 567
SS + + G +++C CS + LT H R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 568 FSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK 606
RK +L E + + KC C F +L+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 59.8 bits (144), Expect = 6e-11
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 8/103 (7%)
Query: 300 SRKGNLTKHMKLHQG-IRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSK------K 352
S + + + G +++C C + LT H R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 353 FSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 394
RK +L + + KC C F +L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 59.8 bits (144), Expect = 6e-11
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 8/103 (7%)
Query: 381 SRKGNLTKHMKLHQG-IRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSK------K 433
S + + + G +++C C + LT H R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 434 FSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 475
RK +L + + KC C F +L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 58.6 bits (141), Expect = 2e-10
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 8/99 (8%)
Query: 223 NLTKHMKLHQG-IRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSK------KFSRK 275
+ + + G +++C C + LT H R RK
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 276 LNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQ 313
+L + + KC C F +L+ HM +
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 56.7 bits (136), Expect = 7e-10
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 1 MKLHQG-IGYKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQ 59
+ G ++C CS + LT H R + ++++ + + +
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE 70
Query: 60 GIR-------YKCNLCSKEFSRNCYLTEHMEQHQ 86
KC C F L+ HM + +
Sbjct: 71 MEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 53.6 bits (128), Expect = 7e-09
Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Query: 100 SYKSSLIEHKKLHQG-IRYKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSS 158
S SS + + G +++C CS + LT HM + R + + S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 159 LIEHKKLHQGIR-------YKCNLCSKEYFFKRNLTEH 189
+ L + KC C + ++L+ H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 52.8 bits (126), Expect = 2e-08
Identities = 17/92 (18%), Positives = 26/92 (28%), Gaps = 8/92 (8%)
Query: 542 SRKDNLTEHKEIHQG-IRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSK------K 594
S + + I G +++C CS + LT H R
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 595 FSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
RK +L + + KC C F
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESL 93
Score = 50.1 bits (119), Expect = 1e-07
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 5/102 (4%)
Query: 154 SYKSSLIEHKKLHQG-IRYKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDN 212
S SS + + G +++C CS Y LT H R + ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 213 LTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 254
+ + + + + KC C F +L+ H
Sbjct: 62 KPRKRSLLEMEGKEDAQK----VLKCMYCGHSFESLQDLSVH 99
Score = 49.4 bits (117), Expect = 3e-07
Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 10/107 (9%)
Query: 127 SRNCYLTEHMEQHQG-IRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRN 185
S + G +++C CS + L H R + + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 186 LTEHKKLHQGIR-------YNCDLCSKEFSRKDNLTDH--KKMHQGN 223
+ L + C C F +L+ H K H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108
Score = 48.6 bits (115), Expect = 5e-07
Identities = 18/134 (13%), Positives = 33/134 (24%), Gaps = 37/134 (27%)
Query: 569 SRKDNLTEHKEIHQG-IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKDI 627
S + + I G +++C CS + + LT HM R ++
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW- 60
Query: 628 PYEVTVKEESYEGDSINVEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIRYKCDL 687
+ +L ++ KC
Sbjct: 61 -----------------------------------SKPRKRSLLEMEGKEDAQKVLKCMY 85
Query: 688 CSKDFSRKDNLTEH 701
C F +L+ H
Sbjct: 86 CGHSFESLQDLSVH 99
Score = 48.2 bits (114), Expect = 7e-07
Identities = 17/98 (17%), Positives = 25/98 (25%), Gaps = 8/98 (8%)
Query: 73 SRNCYLTEHMEQHQG-IRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKE------ 125
S + G +++C CS + L H R +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 126 FSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEH 162
R L E + + KC C F L H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 28.6 bits (63), Expect = 4.9
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 672 KLNKILHQ-DIRYKCDLCSKDFSRKDNLTEHKEIHQ 706
KL + +++C CS + LT H
Sbjct: 8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG 43
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 62.2 bits (152), Expect = 3e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 559 YKCDL--CSKEFSRKDNLTEHKEI-HQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR 612
CD C + FS + L HK+ H + + C C K F+ K +L +HMK+H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 613 -YKCDLCSKEF 622
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 62.2 bits (152), Expect = 3e-12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 263 YKCDL--CSKKFSRKLNLTKHMKI-HQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR 316
CD C + FS + L H K H + + C C K F+ K +L +HMKLH R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 317 -YKCDLCLKEF 326
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 62.2 bits (152), Expect = 3e-12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 344 YKCDL--CSKKFSRKLNLTKHMKI-HQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR 397
CD C + FS + L H K H + + C C K F+ K +L +HMKLH R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 398 -YKCDLCLKEF 407
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 62.2 bits (152), Expect = 3e-12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 425 YKCDL--CSKKFSRKLNLTKHMKI-HQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR 478
CD C + FS + L H K H + + C C K F+ K +L +HMKLH R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 479 -YKCDLCLKEF 488
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 61.4 bits (150), Expect = 5e-12
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKI-HQGIR-YKCN--LCSKEFSRKYNLTDHKKIHQGIR 62
CD C + FS + L HKK H + + C C K F+ K +L +H K+H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 63 -YKCNLCSKEF 72
Y C
Sbjct: 68 DYICEFSGPSS 78
Score = 60.6 bits (148), Expect = 9e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 236 YKCDL--CLKEFSRKDNLTEHKEI-HQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR 289
CD C + FS + L HK+ H + + C C K F+ K +L +HMK+H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 290 -YKCDLCSKEF 299
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 60.6 bits (148), Expect = 9e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 317 YKCDL--CLKEFSRKDNLTEHKEI-HQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR 370
CD C + FS + L HK+ H + + C C K F+ K +L +HMK+H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 371 -YKCDLCSKEF 380
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 60.6 bits (148), Expect = 9e-12
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 398 YKCDL--CLKEFSRKDNLTEHKEI-HQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR 451
CD C + FS + L HK+ H + + C C K F+ K +L +HMK+H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 452 -YKCDLCSKEF 461
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 58.3 bits (142), Expect = 6e-11
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 505 YKCDL--CSKEFSSKGNLTEHMK-QHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR 558
CD C + FS++ L H K QH + + C C K F+ K +L EH ++H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 559 -YKCDLCSKEF 568
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 56.4 bits (137), Expect = 4e-10
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 63 YKCNL--CSKEFSRNCYLTEHM-EQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR 116
C+ C + FS YL H QH + + C C K F++K L EH KLH R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 117 -YKCNLCSKEF 126
Y C
Sbjct: 68 DYICEFSGPSS 78
Score = 54.1 bits (131), Expect = 2e-09
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 117 YKCNL--CSKEFSRNCYLTEHM-EQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR 170
C+ C + FS YL H QH + + C C K F++K L EH KLH R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 171 -YKCNLCSK 178
Y C
Sbjct: 68 DYICEFSGP 76
Score = 52.6 bits (127), Expect = 8e-09
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 479 YKCDL--CLKEFSRKDNLTD--RKIHQGIR-YKCD--LCSKEFSSKGNLTEHMKQHQGIR 531
CD C + FS + L + H + + C C K F+ K +L EHMK H R
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 532 -YKCDLCSKEF 541
Y C+
Sbjct: 68 DYICEFSGPSS 78
Score = 41.0 bits (97), Expect = 8e-05
Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 41/107 (38%)
Query: 144 YKCDL--CSKDFSYKSSLIEHKKL-HQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYN 199
CD C + FS + L HKK H + + C +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------------- 45
Query: 200 CDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEF 245
C K F+ K +L +HMKLH R Y C+
Sbjct: 46 ---CGKSFNFK-----------KHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 31.4 bits (72), Expect = 0.24
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 683 YKCD--LCSKDFSRKDNLTEHKEIHQG 707
+ C C K F+ K +L EH ++H
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSD 65
Score = 27.5 bits (62), Expect = 5.5
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEI 704
CD C + FS + L HK+
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKY 31
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 59.0 bits (144), Expect = 2e-11
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKE-IHQG 583
+ C++C++ F+R+++L H H + Y C LC++ F+R+D L H + IH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 59.0 bits (144), Expect = 2e-11
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 610
+ C++C++ F+R+++L H H + Y C LC++ F+R+ L +H KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 58.7 bits (143), Expect = 3e-11
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDH-KKIHQG 60
+ C++C++ F+R+ +L H + H + Y C LC++ F+R+ L H +KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.9 bits (141), Expect = 6e-11
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHM-KLHQG 314
+ C++C++ F+R+ +L +H + H + Y C LC++ F+R+ L +H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.9 bits (141), Expect = 6e-11
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHM-KLHQG 395
+ C++C++ F+R+ +L +H + H + Y C LC++ F+R+ L +H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.9 bits (141), Expect = 6e-11
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHM-KLHQG 476
+ C++C++ F+R+ +L +H + H + Y C LC++ F+R+ L +H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.5 bits (140), Expect = 7e-11
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 287
+ C++C + F+R+++L H H + Y C LC++ F+R+ L +H KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.5 bits (140), Expect = 7e-11
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 368
+ C++C + F+R+++L H H + Y C LC++ F+R+ L +H KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 57.5 bits (140), Expect = 7e-11
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQG 449
+ C++C + F+R+++L H H + Y C LC++ F+R+ L +H KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 55.2 bits (134), Expect = 6e-10
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHM 82
+ C +C++ F+R+ +L H + H + Y C LC++ F+R L H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 54.0 bits (131), Expect = 1e-09
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKE-IHQG 556
+ C++C++ F+ + +L H + H + Y C LC++ F+R+D L H + IH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 54.0 bits (131), Expect = 1e-09
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT--DRKIHQG 502
+ C++C++ F+R+ +L +H + H + Y C LC + F+R+D L +KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 52.1 bits (126), Expect = 6e-09
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHM 136
+ C++C++ F+ + L H + H + Y C LC++ F+R L H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 49.4 bits (119), Expect = 6e-08
Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKD 626
+ C++C++ F+R+ +L +H + H + Y C LC++ F+R+D
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRD 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKE- 256
+ C++C++ F+R+++L H + H K Y C LC + F+R+D L H +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNE--KP--------YPCGLCNRAFTRRDLLIRHAQK 52
Query: 257 IHQG 260
IH G
Sbjct: 53 IHSG 56
Score = 45.6 bits (109), Expect = 1e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEH-KKLHQG 195
+ C++C++ F+ + L H + H + Y C LC++ + + L H +K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 34.8 bits (81), Expect = 0.009
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ C++C++ F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 34.4 bits (80), Expect = 0.012
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 683 YKCDLCSKDFSRKDNLTEHKE-IHQG 707
Y C LC++ F+R+D L H + IH G
Sbjct: 31 YPCGLCNRAFTRRDLLIRHAQKIHSG 56
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 56.1 bits (134), Expect = 9e-10
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 23 NLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRNCYLTEHM 82
+ + Y+C LC+ + S H+++ + C CS F EH
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 83 EQHQGIRYKCDLCSKDFSYKSSLIEHKK 110
+ + + C C + F S+ H+
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 53.8 bits (128), Expect = 5e-09
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 276 LNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 335
+ + Y+C LC+ + S H +L + C C F + EH
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 336 KEIHQGIRYKCDLCSKKFSRKLNLTKH-MKIHQ 367
+ + + C C + F ++ +H +++H
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 53.8 bits (128), Expect = 5e-09
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 357 LNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 416
+ + Y+C LC+ + S H +L + C C F + EH
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 417 KEIHQGIRYKCDLCSKKFSRKLNLTKH-MKIHQ 448
+ + + C C + F ++ +H +++H
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 51.8 bits (123), Expect = 2e-08
Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 519 NLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHK 578
+ Y+C LC+ + S H+ + + C CS F + EH+
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 579 EIHQGIRYKCDLCSKKFSRKLNLTKH-MKIHQ 609
+ + C C + F ++ +H +++H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 51.4 bits (122), Expect = 4e-08
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Query: 89 RYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDL 148
Y+C LC+ S H++L + C CS F EH + + + C
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLE 74
Query: 149 CSKDFSYKSSLIEHKK 164
C + F S+ H+
Sbjct: 75 CMRTFKSSFSIWRHQV 90
Score = 50.7 bits (120), Expect = 7e-08
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Query: 412 NLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHM 471
+ + Y+C LC+ K S L H ++ + C CS F +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 472 KLHQGIRYKCDLCLKEFSRKDNL 494
+ + C C++ F ++
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSI 85
Score = 50.3 bits (119), Expect = 1e-07
Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 13/104 (12%)
Query: 184 RNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLK 243
+ + Y C LC+ + S H+++ + C C
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA------------AVCPYCSL 50
Query: 244 EFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKH-MKIHQ 286
F + EH+ + + C C + F ++ +H +++H
Sbjct: 51 RFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 49.1 bits (116), Expect = 3e-07
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 143 RYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDL 202
Y+C LC+ S H++L + C CS +F EH+ + + C
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLE 74
Query: 203 CSKEFSRKDNLTDHKK 218
C + F ++ H+
Sbjct: 75 CMRTFKSSFSIWRHQV 90
Score = 48.7 bits (115), Expect = 4e-07
Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 108 HKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQ 167
+ Y+C LC+ + S H + C CS F EH+ +
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCE 66
Query: 168 GIRYKCNLCSKEYFFKRNLTEHKK 191
+ C C + + ++ H+
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRHQV 90
Score = 48.4 bits (114), Expect = 4e-07
Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 466 NLTKHMKLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHMK 525
+ + Y+C LC + S + C CS F S EH
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES 63
Query: 526 QHQGIRYKCDLCSKEFSRKDNLTEH-KEIHQ 555
+ + + C C + F ++ H E+H
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 48.0 bits (113), Expect = 7e-07
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNLC 68
Y+C LC+ + S H+++ + C CS F +H+ + + C C
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLEC 75
Query: 69 SKEFSRNCYLTEH 81
+ F + + H
Sbjct: 76 MRTFKSSFSIWRH 88
Score = 47.6 bits (112), Expect = 1e-06
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 223 NLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM 282
+ + Y+C LC + S H+ + + C CS +F +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 283 KIHQGIRYKCDLCSKEFSRKGNLTKHMK 310
+ + C C + F ++ +H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 47.6 bits (112), Expect = 1e-06
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 304 NLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM 363
+ + Y+C LC + S H+ + + C CS +F +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 364 KIHQGIRYKCDLCSKEFSRKGNLTKHMK 391
+ + C C + F ++ +H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 47.6 bits (112), Expect = 1e-06
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 385 NLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM 444
+ + Y+C LC + S H+ + + C CS +F +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 445 KIHQGIRYKCDLCSKEFSRKGNLTKHMK 472
+ + C C + F ++ +H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 46.8 bits (110), Expect = 2e-06
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Query: 546 NLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM 605
+ + Y+C LC+ + S H+ + + C CS +F +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 606 KIHQGIRYKCDLCSKEFSRK 625
+ + C C + F
Sbjct: 63 SKCEYKKLTCLECMRTFKSS 82
Score = 46.4 bits (109), Expect = 2e-06
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Query: 438 LNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTDR 497
+ + Y+C LC+ + S H +L + C C F + +
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 498 KIH-QGIRYKCDLCSKEFSSKGNLTEHMKQ 526
+ + + C C + F S ++ H +
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 34.1 bits (77), Expect = 0.040
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKK 56
C CS F +H+ + + C C + F +++ H+
Sbjct: 43 AVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQV 90
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 56.1 bits (134), Expect = 2e-09
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 226 KHMKLHQGIRYKCDLCLKEFSRKDNLT-EHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKI 284
K++ H+GI + L+E R LT E K + + I + L + +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 285 HQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 335
++ C LC FS +L +H++ + C +C KEF+ D+ +H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDH 119
Score = 56.1 bits (134), Expect = 2e-09
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 307 KHMKLHQGIRYKCDLCLKEFSRKDNLT-EHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKI 365
K++ H+GI + L+E R LT E K + + I + L + +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 366 HQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 416
++ C LC FS +L +H++ + C +C KEF+ D+ +H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDH 119
Score = 54.2 bits (129), Expect = 7e-09
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 361 KHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDN-LTEHKEI 419
K++ H+GI + +E R LT K K + + + + L
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 420 HQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHM-KLHQGIR 478
++ C LC FS ++L +H++ + C +C KEF+ + H+ K H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 51.1 bits (121), Expect = 1e-07
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 469 KHMKLHQGIRYKCDLCLKEFSRKDNLT--DRKIHQGIRYKCDLCSKEFSSKGNLTEHMKQ 526
K++ H+GI + L+E R LT +++ + I + L +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 527 HQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEH 577
++ C LC FS +L +H + C +C KEF+ D+ +H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDH 119
Score = 50.7 bits (120), Expect = 1e-07
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 522 EHMKQHQGIRYKCDLCSKEFSRKDNLT-EHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEI 580
+++ H+GI + +E R LT E K + + I + L
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 581 HQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKD 626
++ C LC FS ++L +H++ + C +C KEF+ D
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTD 114
Score = 49.5 bits (117), Expect = 3e-07
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 27 HKKIHQGIRYKCNLCSKEFSRKYNLTDH-KKIHQGIRYKCNLCSKEFSRNCYLTEHMEQH 85
+ H+GI ++ +E R + LT K++ + I + + YL +
Sbjct: 13 YLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70
Query: 86 QGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGI 142
++ C LC FS SL +H + + C +C KEF+ +H+ + I
Sbjct: 71 AISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 48.4 bits (114), Expect = 7e-07
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 500 HQGIRYKCDLCSKEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDN-LTEHKEIHQGIR 558
H+GI + +E LT K+ K + + + + + L +
Sbjct: 17 HKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQ 74
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM-KIHQGIR 612
+ C LC FS +L +H + C +C K+F+ + H+ K H
Sbjct: 75 FVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 46.1 bits (108), Expect = 5e-06
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 253 EHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGN-LTKHMKL 311
++ H+GI + ++ R LT K K + + + + + L + +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 312 HQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM-KIHQGIR 370
++ C LCL FS +L +H + C +C K+F+ + H+ K H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 46.1 bits (108), Expect = 5e-06
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 30/144 (20%)
Query: 388 KHMKLHQGIRYKCDLCLKEFSRKDNLT-EHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKI 446
K++ H+GI + L+E R LT E K + + I + L + +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 447 HQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYK 506
++ C LC FS +L +H++ +
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH---------------------------TKV 102
Query: 507 CDLCSKEFSSKGNLTEHMKQHQGI 530
C +C KEF+S + +H+ + I
Sbjct: 103 CPVCKKEFTSTDSALDHVCKKHNI 126
Score = 45.7 bits (107), Expect = 7e-06
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 80 EHMEQHQGIRYKCDLCSKDF-SYKSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQ 138
+++ H+GI + ++ Y E K+L + I + + YL +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 139 HQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEH-KKLHQGIR 197
++ C LC FS SL +H + + C +C KE+ + +H K H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 44.9 bits (105), Expect = 1e-05
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 15/122 (12%)
Query: 134 EHMEQHQGIRYKCDLCSKDF-SYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKL 192
+++ H+GI + ++ Y E K+L + I + L
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 193 HQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLT 252
++ C LC FS +L H + + C +C KEF+ D+
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH------------TKVCPVCKKEFTSTDSAL 117
Query: 253 EH 254
+H
Sbjct: 118 DH 119
Score = 41.8 bits (97), Expect = 1e-04
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 224 LTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHM- 282
L + + ++ C LCL FS +L +H + C +C K+F+ + H+
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Query: 283 KIHQGIR 289
K H
Sbjct: 122 KKHNICV 128
Score = 41.5 bits (96), Expect = 2e-04
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 24 LTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRNCYLTEHME 83
L ++ C LC FS +L H + + C +C KEF+ +H+
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Query: 84 QHQGI 88
+ I
Sbjct: 122 KKHNI 126
Score = 39.1 bits (90), Expect = 0.001
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 1 MKLHQGIGYKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDH-KKIHQ 59
+ + C LC FS +L H + + C +C KEF+ + DH K H
Sbjct: 67 LASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVCKKHN 125
Query: 60 GIR 62
Sbjct: 126 ICV 128
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 51.6 bits (123), Expect = 1e-08
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 262 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
+Y C+ C + + L KH++ H +R Y C C+ F KGNLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 51.6 bits (123), Expect = 1e-08
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 343 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
+Y C+ C + + L KH++ H +R Y C C+ F KGNLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 51.6 bits (123), Expect = 1e-08
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 424 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
+Y C+ C + + L KH++ H +R Y C C+ F KGNLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 48.2 bits (114), Expect = 1e-07
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
+Y C+ C + L +H H +R Y C C+ F K NLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 47.4 bits (112), Expect = 3e-07
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
+Y C+ C L +H++ H +R Y C C+ F K NLT+H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 47.4 bits (112), Expect = 3e-07
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
+Y C+ C + L KH++ H +R Y C C F K NLT+H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 47.4 bits (112), Expect = 3e-07
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
+Y C+ C + L KH++ H +R Y C C F K NLT+H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 46.6 bits (110), Expect = 6e-07
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 531 RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
+Y C+ C + L +H H +R Y C C+ F K NLT+H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 1e-06
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 235 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
+Y C+ C + L +H H +R Y C C+ F K NLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 1e-06
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 316 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
+Y C+ C + L +H H +R Y C C+ F K NLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 1e-06
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
+Y C+ C + L +H H +R Y C C+ F K NLTKHMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 1e-06
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 62 RYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
+Y C C + L +H+ H +R Y C C+ F K +L +H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.5 bits (107), Expect = 1e-06
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 116 RYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
+Y C C + L +H+ H +R Y C C+ F K +L +H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.1 bits (106), Expect = 2e-06
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 35 RYKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
+Y C C + L H + H +R Y C C+ F LT+HM+
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 43.9 bits (103), Expect = 4e-06
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 89 RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
+Y C+ C S L +H + H +R Y C C+ F LT+HM+
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 43.9 bits (103), Expect = 4e-06
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y C+ C + L H + H +R Y C C+ F K NLT H K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 43.6 bits (102), Expect = 7e-06
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 170 RYKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
+Y C C L +H + H +R Y+C C+ F K NLT H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 42.0 bits (98), Expect = 3e-05
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 143 RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+Y C+ C S L +H + H +R Y C C+ + K NLT+H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 40.9 bits (95), Expect = 5e-05
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLT 495
+Y C+ C + L KH++ H +R Y C C F K NLT
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT 46
Score = 39.3 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 585 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCSKEFSRK 625
+Y C+ C + + L KH++ H +R Y C C+ F K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTK 42
Score = 38.5 bits (89), Expect = 4e-04
Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 10/64 (15%)
Query: 197 RYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKE 256
+Y C+ C + L H + H Y C C F K NLT+H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRP----------YHCTYCNFSFKTKGNLTKHMK 50
Query: 257 IHQG 260
Sbjct: 51 SKAH 54
Score = 27.8 bits (61), Expect = 2.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIHQGIR 709
+Y C+ C + L +H H +R
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVR 28
Score = 27.0 bits (59), Expect = 4.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C+ F K NLT+H +
Sbjct: 30 YHCTYCNFSFKTKGNLTKHMKSKAH 54
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 49.7 bits (118), Expect = 6e-08
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 301 RKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNL 359
G+ K K+H G R KC C F R+ L+ K C+ C K ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAAL 55
Query: 360 TKHMKIHQG 368
K G
Sbjct: 56 NKDEGNESG 64
Score = 49.7 bits (118), Expect = 6e-08
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
Query: 382 RKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNL 440
G+ K K+H G R KC C F R+ L+ K C+ C K ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAAL 55
Query: 441 TKHMKIHQG 449
K G
Sbjct: 56 NKDEGNESG 64
Score = 49.7 bits (118), Expect = 7e-08
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 546 NLTEHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKH 604
+ + ++IH G R KC C F R+ L+ K C+ C K ++ L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKD 58
Query: 605 MKIHQG 610
G
Sbjct: 59 EGNESG 64
Score = 49.7 bits (118), Expect = 8e-08
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 222 GNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTK 280
G+ K K+H G R KC C F R+ L+ K C+ C K ++ L K
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNK 57
Query: 281 HMKIHQG 287
G
Sbjct: 58 DEGNESG 64
Score = 47.3 bits (112), Expect = 5e-07
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 250 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKH 308
+ + ++IH G R KC C F R+ L++ C+ C K+ ++ L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 309 MKLHQG 314
G
Sbjct: 59 EGNESG 64
Score = 47.3 bits (112), Expect = 5e-07
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 331 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKH 389
+ + ++IH G R KC C F R+ L++ C+ C K+ ++ L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 390 MKLHQG 395
G
Sbjct: 59 EGNESG 64
Score = 47.3 bits (112), Expect = 5e-07
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 412 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKH 470
+ + ++IH G R KC C F R+ L++ C+ C K+ ++ L K
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 471 MKLHQG 476
G
Sbjct: 59 EGNESG 64
Score = 46.2 bits (109), Expect = 1e-06
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 103 SSLIEHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIE 161
S + +K+H G R KC+ C F R L+ C+ C KD +++L +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNK 57
Query: 162 HKKLHQG 168
+ G
Sbjct: 58 DEGNESG 64
Score = 45.8 bits (108), Expect = 1e-06
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 50 NLTDHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEH 108
+ +KIH G R KC+ C F R L+ C+ C KD +++L +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKD 58
Query: 109 KKLHQG 114
+ G
Sbjct: 59 EGNESG 64
Score = 45.0 bits (106), Expect = 3e-06
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 463 RKGNLTKHMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLT 521
G+ K K+H G R KC C F R+ L+ RK C+ C K+ + L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK-----TPMCEKCRKDSCQEAALN 56
Query: 522 EHMKQHQG 529
+ G
Sbjct: 57 KDEGNESG 64
Score = 43.9 bits (103), Expect = 7e-06
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 157 SSLIEHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTD 215
S + +K+H G R KC+ C + + L+ K C+ C K+ ++ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57
Query: 216 HKKMHQG 222
+ G
Sbjct: 58 DEGNESG 64
Score = 41.6 bits (97), Expect = 4e-05
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 7/61 (11%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQ 555
+KIH G R KC C F + L+ C+ C K+ ++ L + +
Sbjct: 10 QKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDEGNES 63
Query: 556 G 556
G
Sbjct: 64 G 64
Score = 40.4 bits (94), Expect = 1e-04
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQG 60
KC C F R+ L+ K C C K+ ++ L + G
Sbjct: 19 QKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDEGNESG 64
Score = 36.9 bits (85), Expect = 0.002
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 573 NLTEHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRK 625
+ + ++IH G R KC C F R+ L++ C+ C K+ ++
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQE 52
Score = 29.6 bits (66), Expect = 0.91
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
C+ C KD ++ L + + G + S + G
Sbjct: 40 PMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG 73
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 48.3 bits (116), Expect = 1e-07
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEH-KEIHQGIR-YKCDLCSKKFS 596
+ Y C C K FSR D+L H K++H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 48.0 bits (115), Expect = 2e-07
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDH-KKIHQGIR-YKCNLCSKEFS 73
+ Y C C K FSR +L H K++H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 47.2 bits (113), Expect = 3e-07
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK-IHQGIR-YKCDLCSKEFS 300
+ Y C C K FSR +L H+K +H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 47.2 bits (113), Expect = 3e-07
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK-IHQGIR-YKCDLCSKEFS 381
+ Y C C K FSR +L H+K +H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 47.2 bits (113), Expect = 3e-07
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK-IHQGIR-YKCDLCSKEFS 462
+ Y C C K FSR +L H+K +H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 47.2 bits (113), Expect = 3e-07
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMK-IHQGIR-YKCDLCSKEFS 623
+ Y C C K FSR +L H+K +H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 46.8 bits (112), Expect = 3e-07
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 532 YKCDLCSKEFSRKDNLTEH-KEIHQGIR-YKCDLCSKEFS 569
Y C C K FSR D+L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 46.8 bits (112), Expect = 4e-07
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 9 YKCDLCSKEFSRKYNLTDH-KKIHQGIR-YKCNLCSKEFS 46
Y C C K FSR +L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 46.0 bits (110), Expect = 8e-07
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 236 YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKCDLCSKKFS 273
Y C C K FSR D+L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 46.0 bits (110), Expect = 8e-07
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 317 YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKCDLCSKKFS 354
Y C C K FSR D+L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 46.0 bits (110), Expect = 8e-07
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 398 YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKCDLCSKKFS 435
Y C C K FSR D+L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 2e-06
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMK-LHQGIR-YKCDLCLKEFS 327
+ Y C C K FSR +L H+K +H R +KC + + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 2e-06
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMK-LHQGIR-YKCDLCLKEFS 408
+ Y C C K FSR +L H+K +H R +KC + + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 2e-06
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMK-LHQGIR-YKCDLCLKEFS 489
+ Y C C K FSR +L H+K +H R +KC + + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 3e-06
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQ-HQGIR-YKCDLCSKDFS 100
+ Y C C K FSR +L H++Q H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 43.7 bits (104), Expect = 5e-06
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQ-HQGIR-YKCDLCSKDFS 154
+ Y C C K FSR +L H++Q H R +KC + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 43.7 bits (104), Expect = 5e-06
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQ-HQGIR-YKCDLCSKEFS 542
Y C C K FS +L H+KQ H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 43.3 bits (103), Expect = 6e-06
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 479 YKCDLCLKEFSRKDNLT--DRKIHQGIR-YKCDLCSKEFSS 516
Y C C K FSR D+L +++H R +KC + SS
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 43.3 bits (103), Expect = 7e-06
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 90 YKCDLCSKDFSYKSSLIEH-KKLHQGIR-YKCNLCSKEFS 127
Y C C K FS L H K++H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 39.5 bits (93), Expect = 2e-04
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 144 YKCDLCSKDFSYKSSLIEH-KKLHQGIR-YKCNLCSK 178
Y C C K FS L H K++H R +KC +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49
Score = 38.3 bits (90), Expect = 4e-04
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIR-YKCDLCLKEFS 246
+ Y C C K FSR D+L H K ++H R +KC + + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIK----------QVHTSERPHKCQVWVSGPS 52
Score = 34.1 bits (79), Expect = 0.015
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 683 YKCDLCSKDFSRKDNLTEH-KEIHQG 707
Y C C K FSR D+L H K++H
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTS 38
Score = 32.9 bits (76), Expect = 0.038
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEH-KKLHQGIR-YNCDLCSKEFS 208
+ Y C C K + +L H K++H R + C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K FSR L+ H+KIH G + +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K FSR L++H++IH G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K FSR L++H KIH G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K FSR L++H KIH G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K FSR L++H KIH G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K FSR L++H KIH G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K FSR L+ H+KIH G + +
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K FSR L++H K+H G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K FSR L++H K+H G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K FSR L++H K+H G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K FS S L +H+K+H G + +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K FS S L +H+K+H G + +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K FSRN L++H + H G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K FSR L++H++IH G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K FSR L++H++IH G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K FSR L++H++IH G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKC+ C K FSR L++H++IH G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K FSRN L++H + H G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K FSR L++H++IH G + S + G
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG 46
Score = 34.4 bits (80), Expect = 0.007
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K FSR L+ H+K+H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 34.0 bits (79), Expect = 0.011
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K FS L++H K H G +
Sbjct: 4 GSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.082
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K FSR L+ +KIH G +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.13
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + L++H+K+H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 27.1 bits (61), Expect = 3.5
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K FSR
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRN 25
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 48.2 bits (115), Expect = 2e-07
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 278 LTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDN 331
+ IR + C C K + + +L H + H G + + C C + F+R D
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 332 LTEHKEIH 339
L+ H+ H
Sbjct: 65 LSRHRRTH 72
Score = 48.2 bits (115), Expect = 2e-07
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 359 LTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDN 412
+ IR + C C K + + +L H + H G + + C C + F+R D
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 413 LTEHKEIH 420
L+ H+ H
Sbjct: 65 LSRHRRTH 72
Score = 47.4 bits (113), Expect = 4e-07
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 254 HKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTK 307
+ IR + C C K + + +L H + H G + + C C + F+R L++
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 308 HMKLH 312
H + H
Sbjct: 68 HRRTH 72
Score = 47.4 bits (113), Expect = 4e-07
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 335 HKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTK 388
+ IR + C C K + + +L H + H G + + C C + F+R L++
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 389 HMKLH 393
H + H
Sbjct: 68 HRRTH 72
Score = 47.4 bits (113), Expect = 4e-07
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 416 HKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTK 469
+ IR + C C K + + +L H + H G + + C C + F+R L++
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 470 HMKLH 474
H + H
Sbjct: 68 HRRTH 72
Score = 47.0 bits (112), Expect = 5e-07
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 550 HKEIHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLNLTK 603
+ IR + C C K + + +L H H G + + C C ++F+R L++
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 604 HMKIH 608
H + H
Sbjct: 68 HRRTH 72
Score = 47.0 bits (112), Expect = 6e-07
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 523 HMKQHQGIR-YKCDL--CSKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKEFSRKDNLTE 576
IR + C C K + + +L H H G + + C C + F+R D L+
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 577 HKEIH 581
H+ H
Sbjct: 68 HRRTH 72
Score = 45.5 bits (108), Expect = 2e-06
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 224 LTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLN 277
+ IR + C C K + + +L H H G + + C C ++F+R
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 278 LTKHMKIH 285
L++H + H
Sbjct: 65 LSRHRRTH 72
Score = 45.5 bits (108), Expect = 2e-06
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 305 LTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLN 358
+ IR + C C K + + +L H H G + + C C ++F+R
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 359 LTKHMKIH 366
L++H + H
Sbjct: 65 LSRHRRTH 72
Score = 45.5 bits (108), Expect = 2e-06
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 386 LTKHMKLHQGIR-YKCDL--CLKEFSRKDNLTEHKEIHQGIR-YKCDL--CSKKFSRKLN 439
+ IR + C C K + + +L H H G + + C C ++F+R
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 440 LTKHMKIH 447
L++H + H
Sbjct: 65 LSRHRRTH 72
Score = 45.1 bits (107), Expect = 3e-06
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 497 RKIHQGIR-YKCDL--CSKEFSSKGNLTEHMKQHQGIR-YKCDL--CSKEFSRKDNLTEH 550
+ IR + C C K + +L H + H G + + C C + F+R D L+ H
Sbjct: 9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68
Query: 551 KEIH 554
+ H
Sbjct: 69 RRTH 72
Score = 43.5 bits (103), Expect = 9e-06
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIH 58
+ C C K + + +L H + H G + + C+ C + F+R L+ H++ H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 42.4 bits (100), Expect = 2e-05
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 156 KSSLIEHKKLHQGIR-YKCNL--CSKEYFFKRNLTEHKKLHQGIR-YNCDL--CSKEFSR 209
S + IR + C+ C K YF +L H + H G + ++C C + F+R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 210 KDNLTDHKKMH 220
D L+ H++ H
Sbjct: 62 SDELSRHRRTH 72
Score = 41.6 bits (98), Expect = 4e-05
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 440 LTKHMKIHQGIR-YKCDL--CSKEFSRKGNLTKHMKLHQGIR-YKCDL--CLKEFSRKDN 493
+ IR + C C K + + +L H + H G + + C C + F+R D
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 494 LT 495
L+
Sbjct: 65 LS 66
Score = 41.6 bits (98), Expect = 5e-05
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 24 LTDHKKIHQGIR-YKCNL--CSKEFSRKYNLTDHKKIHQGIR-YKCNL--CSKEFSRNCY 77
+ + IR + C+ C K + + +L H + H G + + C+ C + F+R+
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 78 LTEHMEQH 85
L+ H H
Sbjct: 65 LSRHRRTH 72
Score = 38.9 bits (91), Expect = 5e-04
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 15/81 (18%)
Query: 183 KRNLTEHKKLHQGIR-YNCDL--CSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCD 239
+ + IR + C C K + + +L H + H G + C
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK----------PFSCS 51
Query: 240 L--CLKEFSRKDNLTEHKEIH 258
C + F+R D L+ H+ H
Sbjct: 52 WKGCERRFARSDELSRHRRTH 72
Score = 37.8 bits (88), Expect = 0.001
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 577 HKEIHQGIR-YKCDL--CSKKFSRKLNLTKHMKIHQGIR-YKCDL--CSKEFSRKD 626
+ IR + C C K + + +L H + H G + + C C + F+R D
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Score = 37.0 bits (86), Expect = 0.002
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 51 LTDHKKIHQGIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSYKSS 104
+ + IR + C+ C K + ++ +L H H G + + C C + F+
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 105 LIEHKKLH 112
L H++ H
Sbjct: 65 LSRHRRTH 72
Score = 37.0 bits (86), Expect = 0.002
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 102 KSSLIEHKKLHQGIR-YKCNL--CSKEFSRNCYLTEHMEQHQGIR-YKCDL--CSKDFSY 155
S + IR + C+ C K + ++ +L H H G + + C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 156 KSSLIEHKKLH 166
L H++ H
Sbjct: 62 SDELSRHRRTH 72
Score = 35.4 bits (82), Expect = 0.007
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 81 HMEQHQGIR-YKCDL--CSKDFSYKSSLIEHKKLHQGIR-YKCNL--CSKEFSRNCYLTE 134
IR + C C K + S L H + H G + + C+ C + F+R+ L+
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67
Query: 135 HMEQH 139
H H
Sbjct: 68 HRRTH 72
Score = 28.9 bits (65), Expect = 1.7
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEIH 705
+ C C + F+R D L+ H+ H
Sbjct: 48 FSCSWKGCERRFARSDELSRHRRTH 72
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC++C K F +LT H++IH G + +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKCD+C K F Y SSL H+++H G + +
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKCD+C K F Y SSL H+++H G + +
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKCD+C K F +LT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKCD+C K F +LT H +IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKCD+C K F +LT H +IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKCD+C K F +LT H +IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKCD+C K F +LT H +IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKCD+C K F +LT H++IH G + +
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKCD+C K F +LT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKCD+C K F +LT H ++H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKCD+C K F +LT H ++H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKCD+C K F +LT H ++H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKCD+C K F +LT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKCD+C K F +LT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKCD+C K F +LT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC++C K F LT H H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKCD+C K F +LT H+ IH G
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 36.0 bits (84), Expect = 0.003
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC++C K F LT H H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKCD+C K F +LT H + H G +
Sbjct: 4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.009
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y CD+C K F +LT H+++H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.053
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKC++C K + + +LT H+++H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.45
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKCD+C K F +LT ++IH G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC C K ++ K+NL H+K+H G R +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K ++ K NL H+++H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K ++ K NL H K+H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.4 bits (98), Expect = 3e-05
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K ++ K+NL H+K+H G R +
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K ++ K NL H+++H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K ++ K NL H+++H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K ++ K NL H+++H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K ++ K NL H+++H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K ++ K +L H+K+H G R +
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K ++ K +L H+K+H G R +
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K ++ K NL H+++H G
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC C K ++ L H + H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K ++SK NL H K H G R
Sbjct: 4 GSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC C K ++ L H + H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K ++ K NL H+K+H G
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 32.1 bits (74), Expect = 0.061
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC C K Y K NL H+K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 31.7 bits (73), Expect = 0.069
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K ++ K NL +K+H G R
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 26.7 bits (60), Expect = 4.3
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K ++ K
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSK 25
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 47.1 bits (113), Expect = 3e-07
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
+ YKC C K ++R+ NL H+++H G + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
+ YKC+ C K ++R+LNL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
+ YKC+ C K ++R+LNL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
+ YKC+ C K ++R+LNL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
+ YKC+ C K ++R+LNL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 42.1 bits (100), Expect = 2e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
+ YKC+ C K ++R+ NL H+ +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G YKC+ C K ++R+ NL H+++H G + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
+ YKC+ C K ++R+ NL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
+ YKC+ C K ++R+ NL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
+ YKC+ C K ++R+ NL H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+ YKC+ C K ++R+ NL H+ +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
+ YKC+ C K ++R+ NL H+ +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
+ YKC+ C K ++R+ NL H+ +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
+ YKC+ C K ++R+ NL H+ +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K ++ + +L H+++H G + +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K ++ + +L H+++H G + +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 37.1 bits (87), Expect = 0.001
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
+ YKC C K ++R L H H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K ++R+ NL H+ +H G
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
+ YKC C K ++R L H H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
+ Y C+ C K ++R+ NL H+++H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
+ YKC+ C K ++ + NL H + H G +
Sbjct: 4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 32.5 bits (75), Expect = 0.041
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+ YKC C K Y + NL H+++H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 30.9 bits (71), Expect = 0.13
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
+ YKC+ C K ++R+ NL +++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 26.3 bits (59), Expect = 6.8
Identities = 6/23 (26%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
+ YKC+ C K ++R+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRR 25
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G++ Y CN C K FS +LT H+ IH G + +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G++ Y C+ C K FS +LT H+ IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G++ Y C+ C K FS +LT H IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G++ Y C+ C K FS +LT H IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G++ Y C+ C K FS +LT H IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G++ Y C+ C K FS +LT H IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C+ C K FS SSL H+ +H G + +
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C+ C K FS SSL H+ +H G + +
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C+ C K FS +LT H+ IH G + +
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G++ Y C+ C K FS +LT H +H G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G++ Y C+ C K FS +LT H +H G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G++ Y C+ C K FS +LT H +H G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G++ Y C+ C K FS +LT H+ IH G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G++ Y C+ C K FS +LT H+ IH G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G++ Y C+ C K FS +LT H+ IH G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G++ Y C+ C K FS +LT H+ IH G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G++ Y CN C K FS LT H H G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y C+ C K FS +LT H+ IH G + S + G
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G++ Y CN C K FS LT H H G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G++ Y C+ C K FS +LT H+ +H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 33.6 bits (78), Expect = 0.014
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G++ Y C+ C K FS +LT H H G +
Sbjct: 4 GSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.066
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G++ Y CN C K + +LT H+ +H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 29.4 bits (67), Expect = 0.48
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G++ Y C+ C K FS +LT + IH G +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC+ C K F R +L +H++IH G R +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC C K F R +L EH+ IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC C K F R +L +H +IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC C K F R +L +H +IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC C K F R +L +H +IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC C K F R +L +H +IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC C K F R +L +H ++H G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC C K F R +L +H ++H G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC C K F R +L +H ++H G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K F R +L +H++IH G R +
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC+ C K F R+ +L EH H G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC C K F R +L EH+ IH G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC C K F R +L EH+ IH G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC C K F R +L EH+ IH G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC C K F R +L EH+ IH G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K F + L EH+++H G R +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K F + L EH+++H G R +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC+ C K F R+ +L EH H G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K F R +L EH+ IH G
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 33.6 bits (78), Expect = 0.014
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F R +L +H+++H G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 33.2 bits (77), Expect = 0.021
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC C K F +L EH + H G R
Sbjct: 4 GSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 30.9 bits (71), Expect = 0.14
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC+ C K + +L EH+++H G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 30.9 bits (71), Expect = 0.14
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC C K F R +L + R+IH G R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 25.9 bits (58), Expect = 8.3
Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC C K F R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRH 25
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 4e-07
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G Y+C+ C K FSRKY L H++ H G + +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G Y+C C K FSRK L H+ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K FSRKY L H++ H G + +
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K FS K LI H++ H G + +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K FS K LI H++ H G + +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G Y+C C K FSRK L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G Y+C C K FSRK L H+ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G Y+C C K FSRK L H+ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G Y+C C K FSRK L H+ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G Y+C C K FSRK L H+ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G Y+C+ C K FSR L H H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C C K FSRK L H+ H G + S + G
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG 46
Score = 34.8 bits (81), Expect = 0.006
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G Y+C+ C K FSR L H H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G Y C C K FSRK L H++ H G
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 32.9 bits (76), Expect = 0.027
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G Y+C C K FS K L H + H G +
Sbjct: 5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.34
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G Y+C C K FSRK L ++ H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.42
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G Y+C+ C K + K L H++ H G
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 25.9 bits (58), Expect = 8.0
Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G Y+C C K FSRK
Sbjct: 3 SGSSGTGENPYECHECGKAFSRK 25
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 4e-07
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F NLT H+ IH G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F NLT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F NLT H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F NLT H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F NLT H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F NLT H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F NLT H+ IH G + +
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F S+L H+ +H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F S+L H+ +H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F NLT H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F NLT H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F NLT H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKC+ C K F NLT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F NLT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F NLT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F NLT H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F + LT H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F NLT H+ IH G
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F + LT H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F NLT H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 33.6 bits (78), Expect = 0.013
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F + NLT H H G +
Sbjct: 4 GSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.043
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + NLT H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 29.4 bits (67), Expect = 0.42
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F NLT + IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 4e-07
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C C K F++K NLT H++IH G + +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C C K F++K NLT+H +IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C C K F++K NLT+H +IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C C K F++K NLT+H +IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C C K F++K NLT+H +IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C C K F++K NLT+H+ IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F++K NLT H++IH G + +
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C C K F++K NLT+H ++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C C K F++K NLT+H ++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C C K F++K NLT+H ++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K F+ K++L +H+++H G + +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K F+ K++L +H+++H G + +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C C K F++K NLT+H+ IH G +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C C K F++K NLT+H+ IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C C K F++K NLT+H+ IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C C K F++K NLT+H+ IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C C K F++K NLT+H+ IH G + S + G
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGPSSG 46
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C C K F++ LT+H H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C C K F++ LT+H H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C C K F+ K NLT+H + H G +
Sbjct: 4 GSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F++K NLT H+++H G
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.11
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+C C K + K NLT+H+++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C C K F++K NLT ++IH G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 4e-07
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KCN C K F++ +LT H++IH G + +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC+ C K F++ +LT H+ IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC+ C K F++ +LT H++IH G + +
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC+ C K F+ SSL H+++H G + +
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC+ C K F+ SSL H+++H G + +
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KCN C K F+++ LT H H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + +KC+ C K F++ +LT H+ IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + +KC+ C K F++ +LT H+ IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + +KC+ C K F++ +LT H+ IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + +KC+ C K F++ +LT H+ IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KCN C K F+++ LT H H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC+ C K F++ +LT H+ IH G
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 33.6 bits (78), Expect = 0.013
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + +KC+ C K F+ +LT H + H G +
Sbjct: 4 GSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.024
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C+ C K F++ +LT H+++H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 30.6 bits (70), Expect = 0.17
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KCN C K + +LT H+++H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 30.2 bits (69), Expect = 0.30
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + +KC+ C K F++ +LT ++IH G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.3 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +LT+H +IH G + +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +LT H IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +LT H +IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F++ +LT+H +IH G + +
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L H ++H G + +
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L H ++H G + +
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 2e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +LT H H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +LT H ++H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +LT H IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +LT H IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +LT H IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +LT H IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +LT H H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.004
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F++ +LT H IH G
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 33.6 bits (78), Expect = 0.015
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +LT+H ++H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 33.2 bits (77), Expect = 0.018
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +LT H + H G +
Sbjct: 4 GSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.16
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +LT H ++H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 29.0 bits (66), Expect = 0.73
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +LT+ +IH G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC++C KEFS+ +L H+++H G + +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKCD+C KEFS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKCD+C KEFS+ +L H+++H G + +
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKCD+C K+FS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKCD+C K+FS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKCD+C K+FS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKCD+C K+FS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKCD+C KEFS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKCD+C KEFS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKCD+C KEFS+ +L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKCD+C K+FS S L H+++H G + +
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKCD+C K+FS S L H+++H G + +
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKCD+C KEFS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC++C KEFS++ +L H H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKCD+C KEFS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKCD+C KEFS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKCD+C KEFS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC++C KEFS++ +L H H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKCD+C K+FS+ +L H+ +H G
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y CD+C KEFS+ +L H+++H G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 34.4 bits (80), Expect = 0.009
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKCD+C KEFS +L H + H G +
Sbjct: 4 GSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.24
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKCD+C KEFS+ +L +++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.26
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKC++C KE+ +L H+++H G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 26.3 bits (59), Expect = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G + YKCD+C KEFS+
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQS 25
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R Y CN C K F R +L +H K H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 43.3 bits (103), Expect = 6e-06
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 43.3 bits (103), Expect = 6e-06
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 43.3 bits (103), Expect = 6e-06
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 43.3 bits (103), Expect = 6e-06
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R Y C+ C K F R +L EH + H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 41.3 bits (98), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R Y C+ C K F R +L +H+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R Y CN C K F R+ +L EH+++H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C+ C K F R +L +H K H + +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R Y C+ C K F R +L EH + H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R Y C+ C K F R +L EH + H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R Y C+ C K F R +L EH + H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R Y C+ C K F R +L EH + H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R Y CN C K F R+ +L EH+++H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
G R Y C+ C K+F S LIEH K H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
G R Y C+ C K+F S LIEH K H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R Y C+ C K F R +L +H K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K+F R +L EH + H
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 34.4 bits (80), Expect = 0.007
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R Y C+ C K F +L EH+K+H +
Sbjct: 5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.1 bits (74), Expect = 0.058
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R Y CN C K + +L EH K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R Y C+ C K F R +L + K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 26.3 bits (59), Expect = 6.3
Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G R Y C+ C K F R
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRH 25
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.9 bits (110), Expect = 6e-07
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC++C K F + L H +H + +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
G + +KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
G + +KCD+C K F + L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KCD+C K F + L H +H + +
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 562
G + +KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KCD+C K F +S L H +H + +
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KCD+C K F +S L H +H + +
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 266
G + +KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
G + +KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
G + +KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + +KC++C K F L H H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KCD+C K F + L H +H
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 36.3 bits (85), Expect = 0.002
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
G + +KC++C K F L H H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + CD+C K F + L H +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
G + +KCD+C K F + L H H +
Sbjct: 4 GSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.059
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
G + +KC++C K + + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.16
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCD 508
G + +KCD+C K F + L +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 26.7 bits (60), Expect = 4.7
Identities = 7/23 (30%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G + +KCD+C K F +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGR 25
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.0 bits (110), Expect = 7e-07
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC+ C K F+RK L H++ H G R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K F+RK L H++ H G R +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC C K F+RK L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC C K F+RK L H + H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC C K F+RK L H + H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC C K F+RK L H + H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC C K F+RK L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC C K F+RK L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC C K F+RK L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC C K F+RK L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K F+ KS L H++ H G R +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K F+ KS L H++ H G R +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC C K F+RK L H++ H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC C K F+RK L H++ H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC C K F+RK L H++ H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC C K F+RK L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC+ C K F+R L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K F+RK L H++ H G
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 34.4 bits (80), Expect = 0.009
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC+ C K F+R L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 33.6 bits (78), Expect = 0.017
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
YKC C K F+ K L H + H G R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 32.9 bits (76), Expect = 0.025
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F+RK L H++ H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 30.6 bits (70), Expect = 0.19
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC+ C K + K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 30.2 bits (69), Expect = 0.23
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC C K F+RK L ++ H G R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 26.3 bits (59), Expect = 6.0
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC C K F+RK
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRK 25
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.0 bits (110), Expect = 7e-07
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+CN C K FS+ L H+++H G + +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C+ C K FS+ L H+ +H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C+ C K FS+ L H+++H G + +
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C+ C K FS S L H+++H G + +
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C+ C K FS S L H+++H G + +
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C+ C K FS+ L H+ +H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C+ C K FS+ L H+ +H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C+ C K FS+ L H+ +H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+CN C K FS+ L H H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C+ C K FS+ L H+ +H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+CN C K FS+ L H H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C+ C K FS+ L H+ +H G + S + G
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGPSSG 46
Score = 32.9 bits (76), Expect = 0.026
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C+ C K FS L H + H G +
Sbjct: 4 GSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.034
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K FS+ L H+++H G
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37
Score = 29.8 bits (68), Expect = 0.33
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C+ C K FS+ L +++H G +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.43
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+CN C K + L H+++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 8.3
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y+C+ C K FS+
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQT 25
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 7e-07
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC C K F + T H+++H G R +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC C K F + T+H ++H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC C K F + T+H ++H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC C K F + T+H ++H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC C K F + T+H ++H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC C K F + T+H+ +H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 39.9 bits (94), Expect = 9e-05
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K F SS +H++LH G R +
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 39.9 bits (94), Expect = 9e-05
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K F SS +H++LH G R +
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC C K F + T+H +LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC C K F + T+H +LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC C K F + T+H +LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K F + T H+++H G R +
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC C K F N T+H H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.6 bits (88), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC C K F + T+H+ +H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.2 bits (87), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC C K F + T+H+ +H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.2 bits (87), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC C K F + T+H+ +H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.2 bits (87), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC C K F + T+H+ +H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC C K F N T+H H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC C K F + T+H+ +H G R S + G
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46
Score = 34.1 bits (79), Expect = 0.010
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC C K F + T+H + H G R
Sbjct: 4 GSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F + T H+++H G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37
Score = 31.8 bits (73), Expect = 0.070
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC C K + + T+H++LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 28.7 bits (65), Expect = 0.80
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC C K F + T +++H G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 7e-07
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y C C K FSR L H+++H G + +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C C K FSR L KH ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C C K FSR L KH ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C C K FSR L KH ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C C K FSR L KH ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C C K FSR L +H+ +H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C C K FSR L H+++H G + +
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C C K FSR L KH +LH G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C C K FSR L KH +LH G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C C K FSR L KH +LH G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C C K FS L++H++LH G + +
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C C K FS L++H++LH G + +
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C C K FSR L +H+ +H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C C K FSR L +H+ +H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C C K FSR L +H+ +H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C C K FSR L +H+ +H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C C K FSR L +H H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C K FSR L +H+ +H G
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C C K FSR L +H H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.010
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + YNC C K FSR L H+++H G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 32.1 bits (74), Expect = 0.046
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C C K FS L +H + H G +
Sbjct: 4 GSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.32
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y C C K + L +H++LH G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 29.4 bits (67), Expect = 0.45
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C C K FSR L ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 26.0 bits (58), Expect = 7.7
Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G + Y C C K FSR
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRA 25
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K FS+ L H++IH G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K FS+ L +H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K FS+ L +H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K FS+ L +H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K FS+ L +H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K FS+ L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K FS+ L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K FS S L H+++H G + +
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K FS S L H+++H G + +
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K FS+ L H++IH G + +
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K FS+ L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K FS+ L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K FS+ L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K FS+ L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K FS+ L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K FS+ L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K FS+ L H+ IH G + S + G
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG 46
Score = 33.3 bits (77), Expect = 0.019
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K FS L H + H G +
Sbjct: 4 GSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.030
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K FS+ L H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 29.8 bits (68), Expect = 0.33
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K FS+ L ++IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.33
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKCN C K + L H+++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 7.3
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K FS+
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQT 25
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + C+ C K F+ K NL H+KIH G R +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + C C K F+ K NL H KIH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + C C K F+ K NL H KIH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + C C K F+ K NL H KIH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + C C K F+ K NL H KIH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + C C K F+ K NL H K+H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + C C K F+ K NL H K+H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + C C K F+ K NL H K+H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G + C C K F+ K NL H+KIH G R +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + C C K F+ K NL H++IH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+ C C K F++K++LI H+K+H G R +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+ C C K F++K++LI H+K+H G R +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 37.5 bits (88), Expect = 8e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + C C K F+ K NL H++IH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + C C K F+ K NL H++IH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + C C K F+ K NL H++IH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + C C K F+ K NL H++IH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + C+ C K F+ L H + H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ C C K F+ K NL H++IH G
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTG 37
Score = 34.0 bits (79), Expect = 0.011
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + C C K F+ K NL H K H G R
Sbjct: 4 GSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 33.2 bits (77), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + C C K F+ K NL H+K+H G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 33.2 bits (77), Expect = 0.021
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + C+ C K F+ L H + H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + C+ C K + K NL H+K+H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + C C K F+ K NL +KIH G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +L +H++IH G++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +L H+ IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +L H +IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +L H +IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +L H +IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +L H +IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +L H ++H G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +L H ++H G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +L H ++H G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G YKC+ C K F++ +L +H++IH G++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L H+++H G++ +
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L H+++H G++ +
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +L H H G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +L H+ IH G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +L H+ IH G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +L H+ IH G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +L H+ IH G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +L H H G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F++ +L H+ IH G
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTG 37
Score = 32.9 bits (76), Expect = 0.026
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +L +H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 32.5 bits (75), Expect = 0.038
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +L H + H G++
Sbjct: 4 GSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 29.8 bits (68), Expect = 0.30
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +L + ++IH G++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 29.8 bits (68), Expect = 0.40
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +L H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 26.3 bits (59), Expect = 6.4
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K F++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQN 25
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 45.6 bits (109), Expect = 9e-07
Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C K ++++ +LT H+++H G + +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC C K ++++++LT+H ++H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC C K ++++++LT+H ++H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC C K ++++++LT+H ++H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC C K ++++++LT+H ++H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC C K ++++ +LT+H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC C K ++++ +LT+H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC C K ++++ +LT+H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC C K ++++ +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC C K ++++ +LT H+++H G + +
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + +KC C K ++++ +LT+H+ +H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + +KC C K ++++ +LT+H+ +H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + +KC C K ++++ +LT+H+ +H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + +KC C K ++++ +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KC C K +++ +LT+H H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC C K ++ + L +H+++H G + +
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.001
Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC C K ++ + L +H+++H G + +
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.003
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
+KC C K ++++ +LT+H+ +H G + S + G
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KC C K +++ +LT+H H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.016
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + +KC C K ++ + +LT+H + H G +
Sbjct: 4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.021
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K ++++ +LT H+++H G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 30.6 bits (70), Expect = 0.17
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + +KC C K ++++ +LT +++H G +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.34
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KC C K Y + +LT+H+++H G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 26.7 bits (60), Expect = 4.7
Identities = 5/24 (20%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + +KC C K ++++
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQR 25
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 45.6 bits (109), Expect = 9e-07
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC C K F + +L H +H G + +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F + +L H +H G + +
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F + L H +H G + +
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F + L H +H G + +
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC C K F L H H G +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F + +L H +H G
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTG 37
Score = 34.4 bits (80), Expect = 0.007
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC C K F L H H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.025
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F + +L H H G +
Sbjct: 4 GSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.029
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F + +L H +H G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37
Score = 31.4 bits (72), Expect = 0.097
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC C K + +R+L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 0.93
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F + +L +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +L H+ IH G + +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F++ +L H+ IH G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K F++ +L H+ IH G + S + G
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46
Score = 32.5 bits (75), Expect = 0.041
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +L H+ +H G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 31.7 bits (73), Expect = 0.078
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +L H H G +
Sbjct: 4 GSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +L H+ +H G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 27.9 bits (63), Expect = 1.6
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +L R IH G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.0 bits (124), Expect = 1e-06
Identities = 75/422 (17%), Positives = 121/422 (28%), Gaps = 153/422 (36%)
Query: 713 INHGTLGEPSGVMFEKLPSDQWF--EQKLDHFNI------------EEPRTWKQ---RY- 754
++HG+L E +P+ +F Q + FN +EP T + ++
Sbjct: 11 LSHGSL-EHV---LL-VPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFL 65
Query: 755 -FVNSTWYKHGGPIFLMI--------------GGE---------GEASAKWMVEGTWL-D 789
+V+S F + G + E + + +
Sbjct: 66 GYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKN 125
Query: 790 YAHNHNALAVQVEHRFYGKSHPLSDL--SVES----L------Q-----YLSAEQALADL 832
Y A + R + K S L +V L Q Y E L DL
Sbjct: 126 YIT-----ARIMAKRPFDKKSN-SALFRAVGEGNAQLVAIFGGQGNTDDYFE-E--LRDL 176
Query: 833 --AY------FITSM-NTLYSLPAHTKWIAFGGSYPGAL--AAWLRYKYPHLVHGA---M 878
Y I TL L T + + L WL P +
Sbjct: 177 YQTYHVLVGDLIKFSAETLSELIRTT--LDAEKVFTQGLNILEWLEN--PSNTPDKDYLL 232
Query: 879 SA--SGPLRAVVDFPEYF----------GVVADALATVSTECVKAVQTATHTISKMLKSP 926
S S PL V+ Y G + L + + + TA I+ ++
Sbjct: 233 SIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATG-HSQGLVTAV-AIA---ETD 287
Query: 927 SDA-------KYLTEQFKL------CTPLDINNAKDVSSFVES--------LADNIAGV- 964
S K +T F + P + +E+ L+ I+ +
Sbjct: 288 SWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS--ISNLT 345
Query: 965 ---VQY--NKDNRE--SSNHITIDDLCALLMDKKQ-----DPVARYAAVNDLILSKEKKK 1012
VQ NK N + + I +L+ K P + Y L L+ K K
Sbjct: 346 QEQVQDYVNKTNSHLPAGKQVEI----SLVNGAKNLVVSGPPQSLYG----LNLTLRKAK 397
Query: 1013 NP 1014
P
Sbjct: 398 AP 399
Score = 37.7 bits (87), Expect = 0.028
Identities = 46/318 (14%), Positives = 80/318 (25%), Gaps = 141/318 (44%)
Query: 690 KD-FSRKDNLTEHKEIHQGIRVSDINHGTLGEPSGVMFEKLPSDQWFEQKLDHFNIEEPR 748
+D ++R D H + G + DI + P + HF E+ +
Sbjct: 1643 QDVWNRAD---NHFKDTYGFSILDI---VINNPVNLTI--------------HFGGEKGK 1682
Query: 749 TWKQRYFVNSTWYKHGG-------PIFLMIGGEGEASAKWMVEG-------TWLDYAHNH 794
++ Y ++ ++ IF I E S + T
Sbjct: 1683 RIRENY--SAMIFETIVDGKLKTEKIFKEIN---EHSTSYTFRSEKGLLSAT-------Q 1730
Query: 795 N---ALAVQVEHRFYGKSHPLSDLSVESLQYLSAEQALADLAYFITSMNTLYSLPAHTKW 851
AL + + + + L ++ + A F
Sbjct: 1731 FTQPALTL---------------MEKAAFEDLKSKGLIPADATF---------------- 1759
Query: 852 IAFG---GSYPGALAAW---------LRYKYPHLVH-------------------GAMSA 880
A G G Y ALA+ + +V M A
Sbjct: 1760 -A-GHSLGEY-AALASLADVMSIESLVE-----VVFYRGMTMQVAVPRDELGRSNYGMIA 1811
Query: 881 SGPLRAVVDFP-EYFGVVADALATVSTECV------------------KAVQTATHTISK 921
P R F E V + + + V +A+ T T +
Sbjct: 1812 INPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVT-NVLN 1870
Query: 922 MLKSPS-DAKYLTEQFKL 938
+K D L + L
Sbjct: 1871 FIKLQKIDIIELQKSLSL 1888
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
+G + Y+C+ C K FS Y LT H H + +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 41.4 bits (98), Expect = 3e-05
Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K FS Y LT H H + +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K FS L +H H + +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K FS L +H H + +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+G + Y+C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
+G + Y+C C K FS LT+H H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
+G + Y+C+ C K FS + LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.003
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K FS LT+H H
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTR 37
Score = 34.8 bits (81), Expect = 0.006
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
+G + Y+C+ C K FS + LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
Y+C C K FS LT+H H +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
+G + Y C C K FS LT H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 30.2 bits (69), Expect = 0.22
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+G + Y+C+ C K + LT+H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 29.0 bits (66), Expect = 0.72
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
+G + Y+C C K FS LT H +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +L H+ IH G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L+ H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L+ H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 4e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F++ +L H+ IH G + +
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 37.8 bits (89), Expect = 4e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.003
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K F++ +L H+ IH G + S + G
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSSG 46
Score = 32.5 bits (75), Expect = 0.038
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 32.1 bits (74), Expect = 0.051
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +L H H G +
Sbjct: 4 GSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.40
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 27.8 bits (63), Expect = 1.7
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +L R IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R +KCN C K F + +L H++IH G + +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R +KC+ C K F + +L +H +IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R +KC+ C K F + +L +H +IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R +KC+ C K F + +L +H +IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R +KC+ C K F + +L +H +IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R +KC+ C K F + +L +H+ IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R +KC+ C K F + +L +H ++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R +KC+ C K F + +L +H ++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R +KC+ C K F + +L +H ++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R +KCN C K F ++ +L +H H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC+ C K F + LI+H+++H G + +
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC+ C K F + LI+H+++H G + +
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC+ C K F + +L H++IH G + +
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R +KC+ C K F + +L +H+ IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R +KC+ C K F + +L +H+ IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R +KC+ C K F + +L +H+ IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R +KC+ C K F + +L +H+ IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R +KCN C K F ++ +L +H H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.010
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
+KC+ C K F + +L +H+ IH G + S + G
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG 46
Score = 33.2 bits (77), Expect = 0.019
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R +KC+ C K F +L +H + H G +
Sbjct: 4 GSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.050
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R + C+ C K F + +L H+++H G
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 29.8 bits (68), Expect = 0.39
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R +KCN C K + +L +H+++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.51
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R +KC+ C K F + +L ++IH G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 6.5
Identities = 7/23 (30%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G R +KC+ C K F +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQS 25
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 45.3 bits (108), Expect = 1e-06
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
+ Y CN C K F+R ++LT H+KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
+ Y C+ C K F+R +LT+H KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
+ Y C+ C K F+R +LT+H KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
+ Y C+ C K F+R +LT+H KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
+ Y C+ C K F+R +LT+H KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 40.3 bits (95), Expect = 6e-05
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
+ Y C+ C K F+R +LT+H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 40.3 bits (95), Expect = 6e-05
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
+ Y C+ C K F+R +LT+H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 40.3 bits (95), Expect = 6e-05
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
+ Y C+ C K F+R +LT+H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 39.9 bits (94), Expect = 9e-05
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
+ Y C+ C K F+R +LT H++IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 522 EHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
+ Y C+ C K F+R +LT H++IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
+ Y CN C K F+R +LT H + H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.6 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
+ Y C+ C K F+R +LT H++IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.6 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
+ Y C+ C K F+R +LT H++IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.6 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
+ Y C+ C K F+R +LT H++IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 37.2 bits (87), Expect = 7e-04
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C+ C K F+R ++LT H+KIH
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
+ YNC+ C K F+R +LT H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
+ Y CN C K F+R +LT H + H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K F+R +LT H++IH
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 33.3 bits (77), Expect = 0.019
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 80 EHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
+ Y C+ C K F+ L H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 33.3 bits (77), Expect = 0.019
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 134 EHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
+ Y C+ C K F+ L H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 32.9 bits (76), Expect = 0.029
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+ Y CN C K + +LT H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 32.6 bits (75), Expect = 0.033
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG 529
+ Y C+ C K F+ +LT H K H
Sbjct: 5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 30.2 bits (69), Expect = 0.26
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
+ Y C+ C K F+R +LT +KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 27.5 bits (62), Expect = 2.5
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
+ Y C+ C K F+R
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRI 25
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+CN C K FS + +LT H+ IH G + +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C+ C K FS +SSL H+ +H G + +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C+ C K FS +SSL H+ +H G + +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C+ C K FS + +LT H+ IH G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C+ C K FS + +LT H IH G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C+ C K FS + +LT H IH G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C+ C K FS + +LT H IH G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C+ C K FS + +LT H IH G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C+ C K FS + +LT H +H G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C+ C K FS + +LT H +H G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C+ C K FS + +LT H +H G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G Y+C+ C K FS + +LT H+ IH G + +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C+ C K FS + +LT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C+ C K FS + +LT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C+ C K FS + +LT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C+ C K FS + +LT H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+CN C K FS LT H H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C+ C K FS + +LT H+ IH G + S + G
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSSG 46
Score = 34.8 bits (81), Expect = 0.006
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+CN C K FS LT H H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 33.3 bits (77), Expect = 0.018
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C+ C K FS + +LT H H G +
Sbjct: 5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 32.9 bits (76), Expect = 0.026
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K FS + +LT H+ +H G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37
Score = 30.6 bits (70), Expect = 0.21
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+CN C K + + +LT H+ +H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 29.0 bits (66), Expect = 0.65
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C+ C K FS + +LT + IH G +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R Y+C+ C K F+RK L H++IH G + +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R Y+C C K F+RK L H +IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R Y+C C K F+RK L H +IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R Y+C C K F+RK L H +IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R Y+C C K F+RK L H +IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R Y+C C K F+RK L H+ IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R Y+C C K F+RK L H ++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R Y+C C K F+RK L H ++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R Y+C C K F+RK L H ++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 522 EHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R Y+C C K F+RK L H+ IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 80 EHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
G R Y+C C K F+ KS+LI H+++H G + +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 134 EHMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
G R Y+C C K F+ KS+LI H+++H G + +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F+RK L H++IH G + +
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R Y+C C K F+RK L H+ IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R Y+C C K F+RK L H+ IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R Y+C C K F+RK L H+ IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R Y+C+ C K F+R L H H G +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C C K F+RK L H+ IH G + S + G
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPSSG 46
Score = 34.8 bits (81), Expect = 0.006
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R Y+C+ C K F+R L H H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R Y C C K F+RK L H+++H G
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37
Score = 32.9 bits (76), Expect = 0.029
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R Y+C C K F+ K L H + H G +
Sbjct: 4 GSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.18
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R Y+C C K F+RK L ++IH G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R Y+C+ C K + K L H+++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 3.2
Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G R Y+C C K F+RK
Sbjct: 2 SSGSSGTGERHYECSECGKAFARK 25
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 45
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + ++C C K F K NL H++IH G + +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C C K F KGNL H ++H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C C K F KGNL H ++H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C C K F KGNL H ++H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C C K F K NL H +IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C C K F K NL H +IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C C K F K NL H +IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C C K F K NL H +IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C C K F K NL H+ IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G ++C C K F K NL H++IH G + +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + ++C C K F K NL H+ IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
++C C K F K +L+ H+++H G + +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 37.1 bits (87), Expect = 9e-04
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
++C C K F K +L+ H+++H G + +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C C K F K NL H+ IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C C K F K NL H+ IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C C K F K NL H+ IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C C K F L H H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C K F K NL H+ IH G
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 34.4 bits (80), Expect = 0.007
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C C K F +KGNL H + H G +
Sbjct: 5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 33.3 bits (77), Expect = 0.020
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K F K NL H+++H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 33.3 bits (77), Expect = 0.021
Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C C K F L H H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 30.2 bits (69), Expect = 0.24
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + ++C C K + K NL H+++H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 29.0 bits (66), Expect = 0.62
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C C K F K NL ++IH G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y CN C K F +K +L H++IH G + +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C+ C K F +K +L +H +IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C+ C K F +K +L +H +IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C+ C K F +K +L +H +IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C+ C K F +K +L +H +IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C+ C K F +K +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C+ C K F +K +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C+ C K F +K +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C+ C K F +K +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C+ C K F +K +L H++IH G + +
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C+ C K F +K +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C+ C K F +K +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C+ C K F +K +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y CN C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C+ C K F +K +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C+ C K F KS L H+++H G + +
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C+ C K F KS L H+++H G + +
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.005
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y CN C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K F +K +L H+ IH G
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTG 37
Score = 33.3 bits (77), Expect = 0.019
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F +K +L H+++H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 32.1 bits (74), Expect = 0.048
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C+ C K F K +L H + H G +
Sbjct: 4 GSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y CN C K + K +L H+++H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 29.8 bits (68), Expect = 0.36
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C+ C K F +K +L R+IH G +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 5.0
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y C+ C K F +K
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQK 25
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C++C K FS +LT H+++H G + +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+CD+C K FS+ +SL +H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+CD+C K FS+ +SL +H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+CD+C K FS +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+CD+C K FS +LT H+++H G + +
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+CD+C K FS +LT+H+ +H G +
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C++C K FS + LT+H H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+CD+C K FS +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+CD+C K FS +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+CD+C K FS +LT+H+ +H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+CD+C K FS +LT+H+ +H G
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C++C K FS + LT+H H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.018
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y CD+C K FS +LT H+++H G
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 33.2 bits (77), Expect = 0.021
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+CD+C K FS +LT+H + H G +
Sbjct: 4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.24
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C++C K + +LT+H+++H G
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 28.2 bits (64), Expect = 1.3
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+CD+C K FS +LT +++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC +C K F +L H +H G R +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC +C K F S L++H +H G R +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC +C K F S L++H +H G R +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC +C K F +L H +H G R +
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC +C K F + +L +H H G R
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC +C K F +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC +C K F + +L +H H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC +C K F +L +H +H G
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 32.9 bits (76), Expect = 0.029
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C +C K F +L H +H G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 32.5 bits (75), Expect = 0.035
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC +C K F +L +H H G R
Sbjct: 4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 30.2 bits (69), Expect = 0.29
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC +C K + +L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 29.0 bits (66), Expect = 0.66
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC +C K F +L +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R Y C +C K F+ + NL H+KIH G + +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R Y C +C K F+ + NL KH KIH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R Y C +C K F+ + NL KH KIH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R Y C +C K F+ + NL KH KIH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R Y C +C K F+ + NL KH KIH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 6e-05
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C +C K F+ +S+LI+H+K+H G + +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C +C K F+ +S+LI+H+K+H G + +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R Y C +C K F+ + NL KH K+H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R Y C +C K F+ + NL KH K+H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R Y C +C K F+ + NL KH K+H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R Y C +C K F+ + NL +H++IH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C +C K F+ + NL H+KIH G + +
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y C +C K F+ + NL +H++IH G +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R Y C +C K F+ + NL +H++IH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R Y C +C K F+ + NL +H++IH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R Y C +C K F+ + NL +H++IH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R Y C +C K F+ L +H + H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y C +C K F+ + NL +H++IH G + S + G
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46
Score = 34.0 bits (79), Expect = 0.010
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R Y C +C K F+ + NL +H K H G +
Sbjct: 4 GSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.021
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R Y C +C K F+ L +H + H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.8 bits (76), Expect = 0.025
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R Y C +C K F+ + NL H+K+H G
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 30.2 bits (69), Expect = 0.30
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R Y C +C K + + NL +H+K+H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.60
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R Y C +C K F+ + NL +KIH G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y CN C K FS+K L+ H++ H G + +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C+ C K FS+K L+ H+ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C+ C K FS KS L H++ H G + +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C+ C K FS KS L H++ H G + +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C+ C K FS+K L+ H++ H G + +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C+ C K FS+K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y CN C K FS+ L+ H H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C+ C K FS+K L+ H+ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y CN C K FS+ L+ H H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C+ C K FS+K L+ H+ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C+ C K FS+K L+ H+ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C+ C K FS+K L+ H+ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K FS+K L+ H+ H G
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTG 37
Score = 32.9 bits (76), Expect = 0.026
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K FS+K L+ H++ H G
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 32.5 bits (75), Expect = 0.033
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C+ C K FS K L+ H + H G +
Sbjct: 4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.17
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y CN C K + K L+ H++ H G
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 27.5 bits (62), Expect = 2.2
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C+ C K FS+K L+ ++ H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC+ C K F R +L H+ IH G + +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC C K F R +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC C K F R +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC C K F R +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC C K F R +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC C K F R +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K F R +L H+ IH G + +
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC C K F R +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC C K F R +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC C K F R +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 37.8 bits (89), Expect = 4e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC+ C K F RN +L H H G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K F S L H+ +H G + +
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K F S L H+ +H G + +
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC C K F R +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC C K F R +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC C K F R +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC C K F R +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC+ C K F RN +L H H G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K F R +L H+ IH G
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTG 37
Score = 32.4 bits (75), Expect = 0.040
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F R +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 31.7 bits (73), Expect = 0.080
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC C K F +L H H G +
Sbjct: 4 GSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.33
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKC+ C K + +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 28.2 bits (64), Expect = 1.3
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC C K F R +L + IH G +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y C+ C K F L H++IH G + +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y CD C K F L +H +IH G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y CD C K F L +H +IH G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y CD C K F L +H +IH G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y CD C K F L +H +IH G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y CD C K F + L+ H+++H G + +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y CD C K F + L+ H+++H G + +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y CD C K F L H+ IH G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y CD C K F L +H ++H G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y CD C K F L +H ++H G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y CD C K F L +H ++H G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y CD C K F L H++IH G + +
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y CD C K F L H+ IH G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y CD C K F L H+ IH G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y CD C K F L H+ IH G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/42 (26%), Positives = 13/42 (30%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y CD C K F L H+ IH G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C+ C K F + L H H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C+ C K F + L H H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y CD C K F L H+ IH G
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 33.3 bits (77), Expect = 0.020
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y CD C K F L H+++H G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 32.5 bits (75), Expect = 0.034
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y CD C K F L H + H G +
Sbjct: 5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.41
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y CD C K F L ++IH G +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.42
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y C+ C K + L H+++H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 8.5
Identities = 7/24 (29%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y CD C K F
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLS 25
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + ++C C K F+RK L+ H+KIH G + +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C C K F+RK L+ H KIH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C C K F+RK L+ H KIH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C C K F+RK L+ H KIH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C C K F+RK L+ H KIH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C C K F+RK L+ H++IH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C C K F+RK L+ H K+H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C C K F+RK L+ H K+H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C C K F+RK L+ H K+H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G ++C C K F+RK L+ H+KIH G + +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
++C C K F+ KS+L H+K+H G + +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
++C C K F+ KS+L H+K+H G + +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
++C C K F+RK L+ H++IH G +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C C K F+RK L+ H++IH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C C K F+RK L+ H++IH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C C K F+RK L+ H++IH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C C K F+R L+ H + H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
++C C K F+RK L+ H++IH G + S + G
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46
Score = 34.4 bits (80), Expect = 0.008
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C C K F+R L+ H + H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C C K F+ K L+ H K H G +
Sbjct: 4 GSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.021
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K F+RK L+ H+K+H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 29.8 bits (68), Expect = 0.39
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + ++C C K + K L+ H+K+H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 28.6 bits (65), Expect = 0.94
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C C K F+RK L+ +KIH G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F L+ H++IH G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F L++H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F L++H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F L++H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F L++H +IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F + S L H+++H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F + S L H+++H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F L+ H++IH G + +
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F N YL+ H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F L++H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F L++H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F L++H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKC+ C K F L+ H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F N YL+ H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F L+ H+ IH G
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.046
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F L+ H + H G +
Sbjct: 4 GSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.046
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F L+ H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 30.6 bits (70), Expect = 0.17
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + L+ H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 27.9 bits (63), Expect = 1.8
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F L+ ++IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +L H+ IH G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +L +H IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F++ +L H+ IH G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L H+ +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +L H+ IH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K F++ +L H+ IH G + S + G
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46
Score = 32.1 bits (74), Expect = 0.052
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 31.3 bits (72), Expect = 0.10
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +L H H G +
Sbjct: 4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.51
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 29.0 bits (66), Expect = 0.64
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +L R IH G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 7.2
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K F++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQN 25
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y C C K F L +H++IH G + +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C+ C K F L EH+ IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C+ C K F L +H +IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C+ C K F L +H +IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C+ C K F L +H +IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C+ C K F L +H +IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C+ C K F L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C+ C K F L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C+ C K F L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C+ C K F + S L EH+++H G + +
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C+ C K F + S L EH+++H G + +
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C+ C K F L +H++IH G + +
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C+ C K F L EH+ IH G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C+ C K F L EH+ IH G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C+ C K F L EH+ IH G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C+ C K F L EH+ IH G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C C K F + L EH H G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K F L EH+ IH G
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 34.8 bits (81), Expect = 0.006
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C C K F + L EH H G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + YNC+ C K F L +H+++H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 32.5 bits (75), Expect = 0.034
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C+ C K F L EH + H G +
Sbjct: 4 GSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y C C K + L EH+++H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 29.8 bits (68), Expect = 0.39
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C+ C K F L + ++IH G +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 9.3
Identities = 6/24 (25%), Positives = 8/24 (33%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y C+ C K F
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHD 25
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y C C K F+ + NL H+KIH + +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C C K F+ + NL KH KIH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C C K F+ + NL KH KIH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C C K F+ + NL KH KIH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C C K F+ + NL KH KIH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C C K F+ + NL KH K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C C K F+ + NL KH K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C C K F+ + NL KH K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C C K F+ + NL +H++IH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G Y C C K F+ + NL H+KIH + +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C C K F+ +S+LI+H+K+H + +
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C C K F+ +S+LI+H+K+H + +
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C C K F+ + NL +H++IH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C C K F+ + NL +H++IH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C C K F+ + NL +H++IH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C C K F+ + NL +H++IH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C C K F+ L +H + H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y C C K F+ + NL +H++IH + S + G
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46
Score = 33.6 bits (78), Expect = 0.014
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C C K F+ + NL +H K H +
Sbjct: 4 GSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 33.3 bits (77), Expect = 0.023
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C C K F+ L +H + H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 32.9 bits (76), Expect = 0.029
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F+ + NL H+K+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37
Score = 29.8 bits (68), Expect = 0.37
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y C C K + + NL +H+K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 29.4 bits (67), Expect = 0.43
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C C K F+ + NL +KIH +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R Y+C+ C K F +K L+ H++IH+G + +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R Y+C C K F +K L+ H+ IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R Y+C C K F +K L+ H +IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R Y+C C K F +K L+ H +IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R Y+C C K F +K L+ H +IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R Y+C C K F +K L+ H +IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R Y+C C K F +K L+ H ++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R Y+C C K F +K L+ H ++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R Y+C C K F +K L+ H ++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F +K L+ H++IH+G + +
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 522 EHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R Y+C C K F +K L+ H+ IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K F KS+L H+++H+G + +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K F KS+L H+++H+G + +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R Y+C C K F +K L+ H+ IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R Y+C C K F +K L+ H+ IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R Y+C C K F +K L+ H+ IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R Y+C+ C K F + L+ H H+G +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R Y+C+ C K F + L+ H H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.009
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C C K F +K L+ H+ IH+G + S + G
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGPSSG 46
Score = 33.7 bits (78), Expect = 0.013
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R Y C C K F +K L+ H+++H+G
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37
Score = 32.9 bits (76), Expect = 0.027
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R Y+C C K F K L+ H + H+G +
Sbjct: 4 GSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.25
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R Y+C+ C K + K L+ H+++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.54
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R Y+C C K F +K L+ ++IH+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 25.9 bits (58), Expect = 7.4
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G R Y+C C K F +K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQK 25
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F++ +L H+++H G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F++ +L H+ +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F++ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F++ +L H+++H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F+ S L H+++H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F+ S L H+++H G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F++N +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC+ C K F++ +L H+ +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
YKC+ C K F++ +L H+ +H G + S + G
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG 46
Score = 32.1 bits (74), Expect = 0.047
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F++ +L H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 31.7 bits (73), Expect = 0.078
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F+ +L H + H G +
Sbjct: 4 GSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 29.0 bits (66), Expect = 0.58
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKCN C K + +L H+++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 29.0 bits (66), Expect = 0.62
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F++ +L R++H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 25.9 bits (58), Expect = 8.8
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C K F++
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQN 25
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC+ C K F+ K L H+K H G R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K F++KS L H+K H G R +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K F++KS L H+K H G R +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC C K F+ K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K F+ K L H+K H G R +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + YKC C K F+ K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC C K F+ K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC C K F+ K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.1 bits (87), Expect = 9e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC C K F+ K L H++ H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKC+ C K F+ L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 34.4 bits (80), Expect = 0.009
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K F+ K L H++ H G
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 34.0 bits (79), Expect = 0.012
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC C K F+ K L H K H G R
Sbjct: 5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 34.0 bits (79), Expect = 0.012
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKC+ C K F+ L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 32.5 bits (75), Expect = 0.044
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F+ K L H+K H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 31.0 bits (71), Expect = 0.13
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKC+ C K + +K L H+K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 29.4 bits (67), Expect = 0.46
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC C K F+ K L +K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 2e-06
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R +KCN C K F R+ +L H ++H + +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R +KC+ C K F R+ +L H+++H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R +KC+ C K F R+ +L H+++H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R +KC+ C K F R+ +L H+++H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R +KC+ C K F R+ +L H+++H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC+ C K F R+ +L H ++H + +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R +KC+ C K F R+ +L H +H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC+ C K F +S L H +LH + +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC+ C K F +S L H +LH + +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R +KC+ C K F R+ +L H++LH +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R +KC+ C K F R+ +L H++LH +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R +KC+ C K F R+ +L H++LH +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R +KCN C K F R +L H+ H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R +KC+ C K F R+ +L H +H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R +KC+ C K F R+ +L H +H +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R +KC+ C K F R+ +L H +H +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R +KC+ C K F R+ +L H +H +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R +KCN C K F R +L H+ H +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC+ C K F R+ +L H +H
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 32.9 bits (76), Expect = 0.025
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R + C+ C K F R+ +L H ++H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 31.7 bits (73), Expect = 0.064
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R +KC+ C K F + +L H++ H +
Sbjct: 4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 30.6 bits (70), Expect = 0.20
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G R +KCN C K + + +L H +LH
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 28.7 bits (65), Expect = 0.96
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R +KC+ C K F R+ +L ++H +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.4 bits (106), Expect = 3e-06
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C++C K FS + +L+ H++IH G + +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C +C K FS + +L+ H +IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C +C K FS + +L+ H +IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C +C K FS + +L+ H +IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C +C K FS + +L+ H +IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C +C K FS + +L+ H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C +C K FS + +L+ H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C +C K FS + +L+ H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C +C K FS + +L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C +C K FS++ SL H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C +C K FS++ SL H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C +C K FS + +L+ H++IH G + +
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C +C K FS + +L+ H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C +C K FS + +L+ H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C +C K FS + +L+ H+ IH G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C +C K FS + +L+ H+ IH G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C++C K FS L+ H H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C +C K FS + +L+ H+ IH G + S + G
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46
Score = 33.6 bits (78), Expect = 0.016
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C++C K FS L+ H H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 32.5 bits (75), Expect = 0.038
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C +C K FS + +L+ H+++H G
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37
Score = 32.5 bits (75), Expect = 0.042
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C +C K FS + +L+ H + H G +
Sbjct: 4 GSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 29.4 bits (67), Expect = 0.57
Identities = 9/41 (21%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+C++C K + +++L+ H+++H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 28.2 bits (64), Expect = 1.1
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C +C K FS + +L+ ++IH G +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKCN C K F + +L H+ H G + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC+ C K F +SSL H+ H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC+ C K F +SSL H+ H G + +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + YKC+ C K F + +L H+ H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + YKC+ C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + YKC+ C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + YKC+ C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + YKC+ C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC+ C K F + +L H+ H G + +
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + YKC+ C K F + +L H H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + YKC+ C K F + +L H H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + YKC+ C K F + +L H H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + YKCN C K F L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
YKC+ C K F + +L H+ H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + YKC+ C K F + +L H+ H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + YKC+ C K F + +L H+ H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + YKC+ C K F + +L H+ H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.011
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + YKCN C K F L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.015
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C K F + +L H+ H G
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSG 37
Score = 32.5 bits (75), Expect = 0.033
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + YKC+ C K F ++ +L H H G +
Sbjct: 4 GSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.090
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F + +L H+ H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 29.4 bits (67), Expect = 0.44
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + YKCN C K + + +L H+ H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 2.4
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + YKC+ C K F + +L + H G +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 44.0 bits (105), Expect = 3e-06
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + + C C K FS L H++IH G + +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + + C C K FS L +H+ IH G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + + C C K FS + L +H +IH G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + + C C K FS + L +H +IH G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + + C C K FS + L +H +IH G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + + C C K FS + L +H +IH G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + + C C K FS L +H ++H G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + + C C K FS L +H ++H G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + + C C K FS L +H ++H G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+ C C K FS L +H+++H G + +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+ C C K FS L +H+++H G + +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 6/42 (14%)
Query: 526 QHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+ C C K FS L +H+ IH G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+ C C K FS L H++IH G + +
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + + C C K FS L +H+ IH G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + + C C K FS L +H+ IH G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + + C C K FS L +H+ IH G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + + C C K FS + L +H H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + + C C K FS + L +H H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
+ C C K FS L +H+ IH G + S + G
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46
Score = 33.6 bits (78), Expect = 0.015
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + ++C C K FS L H+++H G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 32.9 bits (76), Expect = 0.025
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + + C C K FS L +H + H G +
Sbjct: 4 GSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.19
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + + C C K + L +H+++H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.50
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + + C C K FS L R+IH G +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G + Y+CN C K F+ K NL H++ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C+ C K F+ K NL H+ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C+ C K F+ K NL H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
Y+C+ C K F+ K NL H++ H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C+ C K F+ K NL H+ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C+ C K F+ K NL H+ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C+ C K F+ K NL H+ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C+ C K F+ K NL H+ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
Y+C+ C K F+ KS+L+ H++ H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
Y+C+ C K F+ KS+L+ H++ H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+CN C K F+ L H H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 35.1 bits (82), Expect = 0.004
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C+ C K F+ K NL H+ H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTG 37
Score = 34.4 bits (80), Expect = 0.007
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F+ K NL H++ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 33.6 bits (78), Expect = 0.016
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+CN C K F+ L H H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 33.2 bits (77), Expect = 0.023
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C+ C K F++K NL H + H G
Sbjct: 5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+CN C K + K NL H++ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 29.0 bits (66), Expect = 0.75
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C+ C K F+ K NL ++ H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G R Y+C C K F K +L H++ H G + +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K F KSSLI H++ H G + +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K F KSSLI H++ H G + +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G R Y+C C K F K +L H+ H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G R Y+C C K F K +L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G R Y+C C K F K +L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G R Y+C C K F K +L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G R Y+C C K F K +L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G R Y+C C K F K +L H + H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G R Y+C C K F K +L H + H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G R Y+C C K F K +L H + H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F K +L H++ H G + +
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G R Y+C C K F K +L H+ H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G R Y+C C K F K +L H+ H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G R Y+C C K F K +L H+ H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G R Y+C C K F K +L H+ H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G R Y+C C K F L H H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G R Y+C C K F L H H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.020
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R Y C C K F K +L H++ H G
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37
Score = 33.3 bits (77), Expect = 0.021
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F K +L H+ H G
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTG 37
Score = 32.9 bits (76), Expect = 0.030
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G R Y+C C K F +K +L H + H G +
Sbjct: 4 GSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.26
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G R Y+C C K + K +L H++ H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.39
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G R Y+C C K F K +L R+ H G +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 7.8
Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G R Y+C C K F K
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTK 25
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.0 bits (105), Expect = 3e-06
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C K F + +L H +IH G + +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC C K F + ++L H++IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC C K F + ++L H++IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC C K F + ++L H++IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC C K F + ++L H++IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC C K F + +L H IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC C K F + +L H+++H G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC C K F + +L H+++H G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC C K F + +L H+++H G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC C K F + +L H +IH G + +
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KC C K F +N +L H+ H G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + +KC C K F + +L H IH G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + +KC C K F + +L H IH G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + +KC C K F + +L H IH G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC C K F L H ++H G + +
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.002
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC C K F L H ++H G + +
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 35.9 bits (84), Expect = 0.002
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + +KC C K F + +L H IH G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KC C K F +N +L H+ H G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.009
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC C K F + +L H IH G
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTG 37
Score = 31.7 bits (73), Expect = 0.063
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K F + +L H ++H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 31.7 bits (73), Expect = 0.064
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + +KC C K F +L H++ H G +
Sbjct: 5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.89
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + +KC C K F + +L +IH G +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.94
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KC C K + +L H ++H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 44.1 bits (105), Expect = 3e-06
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C K F++ L H+++H G + +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC+ C K F++ L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC+ C K+F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC+ C K+F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC+ C K+F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC+ C K+F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC+ C K F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC+ C K F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC+ C K F++ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC+ C K F++ L H+++H G + +
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC+ C K F+ S L H+++H G + +
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC+ C K F+ S L H+++H G + +
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KC C K F++N L H H G +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + +KC+ C K F++ L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + +KC+ C K F++ L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + +KC+ C K F++ L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + +KC+ C K F++ L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.007
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KC C K F++N L H H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC+ C K F++ L H+ +H G
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 32.1 bits (74), Expect = 0.052
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C+ C K F++ L H+++H G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 32.1 bits (74), Expect = 0.061
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + +KC+ C K F+ L H + H G +
Sbjct: 4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.99
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KC C K + L H+++H G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 28.3 bits (64), Expect = 1.1
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + +KC+ C K F++ L +++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 43.7 bits (104), Expect = 4e-06
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + YKC C K + R+ +L H+++H G + +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
G + YKC C K + R+ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
G + YKC C K + R+ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
G + YKC C K + R+ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
G + YKC C K + R+L+L H ++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
G + YKC C K + R+L+L H ++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
G + YKC C K + R+L+L H ++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
G + YKC C K + R+L+L H ++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
G + YKC C K + R+ +L H+ +H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 266
G + YKC C K + R+ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
G + YKC C K + R+ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
G + YKC C K + R+ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G YKC C K + R+ +L H+++H G + +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 562
G + YKC C K + R+ +L H+ +H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + YKC C K + R L H H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 36.0 bits (84), Expect = 0.003
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K + + L H+++H G + +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 36.0 bits (84), Expect = 0.003
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K + + L H+++H G + +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 35.2 bits (82), Expect = 0.005
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K + R+ +L H+ +H G
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 34.8 bits (81), Expect = 0.006
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
G + YKC C K + R L H H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 33.3 bits (77), Expect = 0.019
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
G + YKC C K + + +L H + H G +
Sbjct: 5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 32.1 bits (74), Expect = 0.049
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K + R+ +L H+++H G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 31.0 bits (71), Expect = 0.14
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCD 508
G + YKC C K + R+ +L +++H G +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 29.4 bits (67), Expect = 0.52
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
G + YKC C K Y + +L H+++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 26.7 bits (60), Expect = 4.4
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC C K + R+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRR 25
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 43.6 bits (104), Expect = 4e-06
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C C K FS+ +L H+++H G + +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C C K FS+ +L +H ++H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K FS + LI+H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K FS + LI+H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C C K FS+ +L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G Y+C C K FS+ +L H+++H G + +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C C K FS+ +L +H H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Query: 526 QHQGIR-----YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C C K FS+ +L +H+ +H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C C K FS+ +L +H+ +H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C C K FS+ +L +H+ +H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C C K FS+ +L +H+ +H G +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C C K FS+ +L +H H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.009
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C C K FS+ +L +H+ +H G + S + G
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG 46
Score = 31.7 bits (73), Expect = 0.069
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C C K FS +L +H + H G +
Sbjct: 4 GSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.076
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K FS+ +L H+++H G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 28.2 bits (64), Expect = 1.1
Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 9/45 (20%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIR-----YKC 507
G + Y+C C K FS+ +L HQ +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLI---QHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.5
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C C K + +L +H+++H G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 25.9 bits (58), Expect = 9.5
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y+C C K FS+
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQT 25
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 43.7 bits (104), Expect = 4e-06
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y CN+C K F +L H ++H +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 2e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
G + Y C++C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
G + Y C++C K F +L +H +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + Y CN+C K F + +L +H+ H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 266
G + Y C++C K F +L +H +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
G + Y C++C K F +L +H +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
G + Y C++C K F +L +H +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 522 EHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 562
G + Y C++C K F +L +H +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
G + Y CN+C K F + +L +H+ H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C++C K F + L +H ++H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 8/43 (18%), Positives = 15/43 (34%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C++C K F + L +H ++H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C++C K F +L H ++H +
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y C++C K F +L +H +H +S + G
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSSG 46
Score = 33.6 bits (78), Expect = 0.014
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
G + Y C++C K F +L +H++ H
Sbjct: 4 GSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 33.6 bits (78), Expect = 0.014
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y+C++C K F +L H ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37
Score = 30.9 bits (71), Expect = 0.13
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
G + Y CN+C K + +L +H ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 30.6 bits (70), Expect = 0.19
Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCD 508
G + Y C++C K F +L ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.5 bits (62), Expect = 2.3
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y C++C K F
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLS 25
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 43.7 bits (104), Expect = 5e-06
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G++ Y C+ C+K FS K L H++ H G++ +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G++ Y C C+K FS K L H + H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G++ Y C C+K FS K L H + H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G++ Y C C+K FS K L H + H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G++ Y C C+K FS K L H + H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G++ Y C C+K FS K L H + H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G++ Y C C+K FS K L H + H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G++ Y C C+K FS K L H + H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G++ Y C C+K FS K L H+ H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C C+K FS KS LI H++ H G++ +
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C C+K FS KS LI H++ H G++ +
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y C C+K FS K L H++ H G++ +
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G++ Y C C+K FS K L H+ H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G++ Y C C K FS K L H+ H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G++ Y C C K FS K L H+ H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G++ Y C C K FS K L H+ H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G++ Y C+ C+K FS L H H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 33.7 bits (78), Expect = 0.014
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G++ Y C+ C+K FS L H H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 33.7 bits (78), Expect = 0.016
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C+K FS K L H+ H G
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 32.9 bits (76), Expect = 0.029
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G++ Y C C+K FS K L H++ H G
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 32.1 bits (74), Expect = 0.050
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G++ Y C C+K FS K L H + H G++
Sbjct: 5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.4 bits (67), Expect = 0.43
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G++ Y C+ C+K + K L H++ H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 28.7 bits (65), Expect = 0.85
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G++ Y C C K FS K L ++ H G++
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 26.0 bits (58), Expect = 8.4
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G++ Y C C+K FS K
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLK 25
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 43.3 bits (103), Expect = 5e-06
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C++C K F++K L H++IH G + +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C +C K F++K L H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C +C K F++K L H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C +C K F++K L H ++H G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C +C K F++K L H++IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C +C K F++K L H +IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C +C K F++K L H +IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C +C K F++K L H +IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C +C K F++K L H +IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C +C K F++K L H++IH G + +
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C +C K F+ KS L H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C +C K F+ KS L H+++H G + +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C +C K F++K L H++IH G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C +C K F++K L H++IH G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C +C K F++K L H++IH G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C +C K F++K L H++IH G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C++C K F++ L H + H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
Y+C +C K F++K L H++IH G + S + G
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG 46
Score = 32.5 bits (75), Expect = 0.034
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C++C K F++ L H + H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.050
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C +C K F++K L H+++H G
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37
Score = 31.7 bits (73), Expect = 0.075
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C +C K F+ K L H + H G +
Sbjct: 5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.75
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C +C K F++K L ++IH G +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.5
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+C++C K + K L H+++H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 8.0
Identities = 7/24 (29%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y+C +C K F++K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKK 25
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 43.3 bits (103), Expect = 6e-06
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + ++C C K F++ +L H+++H G + +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 549 EHKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 253 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C+ C K+F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 334 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C+ C K+F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 415 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C+ C K+F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 576 EHKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C+ C K+F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C+ C K F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C+ C K F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C+ C K F++ +L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 8/32 (25%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
++C+ C K F++ +L H+++H G + +
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 9e-04
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C C K F++N +L H H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
++C+ C K F+ S L H+++H G + +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
++C+ C K F+ S L H+++H G + +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 522 EHMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + ++C+ C K F++ +L H+ +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 107 EHKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C C K F++N +L H H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.012
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C+ C K F++ +L H+ +H G
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 32.9 bits (76), Expect = 0.026
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 188 EHKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C+ C K F++ +L H+++H G
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 31.7 bits (73), Expect = 0.081
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C+ C K F+ +L H + H G +
Sbjct: 4 GSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 29.1 bits (66), Expect = 0.66
Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C+ C K F++ +L +++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 1.0
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 161 EHKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + ++C C K + +L H+++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 9.4
Identities = 5/24 (20%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + ++C+ C K F++
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQN 25
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 43.3 bits (103), Expect = 6e-06
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G R ++C+ C K F + N H++IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 40.2 bits (95), Expect = 8e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G R ++C C K F + N +H +IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 40.2 bits (95), Expect = 8e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G R ++C C K F + N +H +IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 40.2 bits (95), Expect = 8e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G R ++C C K F + N +H +IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 40.2 bits (95), Expect = 8e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G R ++C C K F + N +H +IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G R ++C C K F + N +H+ IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G R ++C C K F + N +H ++H G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G R ++C C K F + N +H ++H G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G R ++C C K F + N +H ++H G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G R ++C C K F + N +H+ IH G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G R ++C C K F + N +H+ IH G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G R ++C C K F + N +H+ IH G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G R ++C C K F + N +H+ IH G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.1 bits (87), Expect = 0.001
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
++C C K F + N H++IH G
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G R ++C C K F S+ I+H+++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G R ++C C K F S+ I+H+++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C K F + N +H+ IH G
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G R ++C+ C K F + +H H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G R + C C K F + N H+++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.010
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G R ++C+ C K F + +H H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.012
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG 529
G R ++C C K F N +H + H G
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 32.1 bits (74), Expect = 0.049
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G R ++C+ C K + N +H+++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 30.2 bits (69), Expect = 0.24
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
G R ++C C K F + N R+IH G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 26.3 bits (59), Expect = 5.6
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G R ++C C K F +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQA 25
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 43.3 bits (103), Expect = 6e-06
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G+ YKC+ C K FS K L H+++H + +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
YKC C K FS K L H+++H + +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G+ YKC C K FS KL L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G+ YKC C K FS KL L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G+ YKC C K FS KL L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G+ YKC C K FS KL L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
YKC C K FS K L+ H+++H + +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
YKC C K FS K L+ H+++H + +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G+ YKC C K FS K L H+ +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G+ YKC C K FS K L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G+ YKC C K FS K L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G+ YKC C K FS K L H ++H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G+ YKC C K FS K L H+ +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G+ YKC C K FS K L H+ +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G+ YKC C K FS K L H+ +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G+ YKC C K FS K L H+ +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC C K FS K L H+ +H
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G+ YKC+ C K FS L H H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.1 bits (79), Expect = 0.011
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G+ YKC+ C K FS L H H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.1 bits (79), Expect = 0.012
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
YKC C K FS K L H + H +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.045
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G+ Y C C K FS K L H++MH
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 29.4 bits (67), Expect = 0.52
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G+ YKC+ C K + K L H+++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 28.3 bits (64), Expect = 1.1
Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 9/44 (20%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIR-----YKC 507
G+ YKC C K FS K L +HQ +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLL---VHQRMHTREKPSGP 43
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.9 bits (102), Expect = 7e-06
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G + Y+C C K F+ + NL H+KIH G +
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C C K F+ + NL H KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C C K F+ + NL H KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C C K F+ + NL H KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C C K F+ + NL H KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C C K F+ + NL H++IH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C C K F+ + NL H K+H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C C K F+ + NL H K+H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C C K F+ + NL H K+H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
G Y+C C K F+ + NL H+KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C C K F+ + NL H++IH G +
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C C K F+ + NL H++IH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C C K F+ + NL H++IH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C C K F+ + NL H++IH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
Y+C C K F+ +S+L H+K+H G +
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
Y+C C K F+ +S+L H+K+H G +
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C C K F+ L H + H G +
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F+ + NL H++IH G
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 34.0 bits (79), Expect = 0.011
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C C K F+ + NL H K H G +
Sbjct: 4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.031
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C C K F+ L H + H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.037
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F+ + NL H+K+H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 29.8 bits (68), Expect = 0.32
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C C K + + NL H+K+H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 28.6 bits (65), Expect = 0.97
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C C K F+ + NL +KIH G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 42.9 bits (102), Expect = 7e-06
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 26 DHKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C K FSR+ L H K+H G + +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC C K FSR+ L H KLH G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC C K FSR+ L H KLH G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC C K FSR+ L H KLH G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC C K FSR+ L H K+H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC C K FSR+ L H K+H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC C K FSR+ L H K+H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC C K FSR+ L H ++H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC C K FSR+ L H K+H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + +KC C K FSR+ L H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + +KC C K FSR+ L H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 4e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + +KC C K FSR+ L H ++H G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC C K FSR+ L H K+H G + +
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + +KC C K FSR+ L H ++H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC C K FS +S+L H KLH G + +
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC C K FS +S+L H KLH G + +
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 53 DHKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KC C K FSR L H + H G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC C K FSR+ L H ++H G
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTG 37
Score = 34.4 bits (80), Expect = 0.007
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KC C K FSR L H + H G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.020
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + +KC C K FS + L H K H G +
Sbjct: 4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.038
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K FSR+ L H K+H G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 30.6 bits (70), Expect = 0.17
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + +KC C K FSR+ L K+H G +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.60
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + +KC C K + + L H KLH G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 5.2
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + +KC C K FSR+
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRR 25
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C +CSK F++K +L H+K H G + +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C +CSK F++K +L +H K H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C +CSK F++K +L +H++ H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C +CSK F++K +L H+K H G + +
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C +CSK F++ +L +H + H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C +C K F++K +L +H++ H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C +C K F++K +L +H++ H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C +C K F++K +L +H++ H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C +CSK F+ K+ L +H+K H G + +
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C +CSK F+ K+ L +H+K H G + +
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C +CSK F++K +L +H++ H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.011
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C +CSK F++ +L +H + H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.015
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C +CSK F++K +L +H++ H G
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 32.5 bits (75), Expect = 0.043
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C +CSK F++K +L H+K H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 32.1 bits (74), Expect = 0.046
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C +CSK F+ K +L +H K H G +
Sbjct: 4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.67
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C +CSK + K +L +H+K H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 27.9 bits (63), Expect = 1.9
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C +C K F++K +L +K H G +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.9 bits (102), Expect = 8e-06
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + ++C C K FS L H++IH G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
G + ++C C K FS+ S LI H+++H G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
G + ++C C K FS+ S LI H+++H G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C C K FS L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C C K FS L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C C K FS L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C C K FS L H+ IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C C K FS L H +IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C C K FS L H +IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C C K FS L H +IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C C K FS L H +IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C C K FS L H+ IH G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C C K FS L H+ IH G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C C K FS L H+ IH G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C C K FS N L H H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + ++C C K FS L H+ IH G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G ++C C K FS L H++IH G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C C K FS N L H H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 33.7 bits (78), Expect = 0.017
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHG 716
++C C K FS L H+ IH G S + G
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG 46
Score = 31.7 bits (73), Expect = 0.066
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C C K FS L H + H G
Sbjct: 4 GSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 31.4 bits (72), Expect = 0.091
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K FS L H+++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.56
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + ++C C K + F L H+++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 28.7 bits (65), Expect = 0.88
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C C K FS L ++IH G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 26.7 bits (60), Expect = 5.1
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + ++C C K FS
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFN 25
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.9 bits (102), Expect = 9e-06
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C+ C K F +K L H++IH G +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C C K F +K L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C C K F +K L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C C K F +K L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C C K F +K L H+ IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C C K F +K L H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C C K F +K L H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C C K F +K L H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C C K F +K L H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C C K F +K L H+ IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C C K F +K L H+ IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C C K F +K L H+ IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y+C C K F +K L H+ IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F +K L H++IH G +
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 84 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K F KS L H+++H G +
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 138 QHQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K F KS L H+++H G +
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C+ C K F + L H H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F +K L H+ IH G
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 33.7 bits (78), Expect = 0.017
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C+ C K F + L H H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.9 bits (76), Expect = 0.027
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y+C C K F K L H + H G
Sbjct: 5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.5 bits (75), Expect = 0.039
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F +K L H+++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 30.2 bits (69), Expect = 0.27
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C C K F +K L ++IH G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.8 bits (68), Expect = 0.39
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y+C+ C K + K L H+++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 26.7 bits (60), Expect = 5.2
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + Y+C C K F +K
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKK 25
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 42.2 bits (100), Expect = 1e-05
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y C C K F L H+++H G + +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C C K F L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y C C K F + S L++H+++H G + +
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y C C K F + S L++H+++H G + +
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C C K F L KH ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Query: 4 HQGIG-----YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
G Y C C K F L H+++H G + +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C C K F L +H H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C C K F L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C C K F L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C C K F L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C C K F L +H+ +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.014
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C C K F L +H H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.017
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C K F L +H+ +H G
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSG 37
Score = 32.2 bits (74), Expect = 0.059
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + YNC C K F L H+++H G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 31.8 bits (73), Expect = 0.072
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C C K F L +H + H G +
Sbjct: 4 GSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 29.5 bits (67), Expect = 0.48
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y C C K + + L +H+++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 26.8 bits (60), Expect = 4.8
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C C K F L +++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 42.1 bits (100), Expect = 1e-05
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C FS+ +L H+ +H G + +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC C FS SSL H+ +H G + +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC C FS SSL H+ +H G + +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC C FS+ +L H+ +H G + +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + +KC C FS+ +L H+ +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + +KC C FS+ +L H +H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+KC C FS+ +L H+ +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
+KC C FS+ +L H+ +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
+KC C FS+ +L H+ +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
+KC C FS+ +L H+ +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC C FS+ +L H+ +H G
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVG 37
Score = 34.1 bits (79), Expect = 0.009
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + +KC C FS+ L H H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.011
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
+KC C FS +L H H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + +KC C FS+ L H H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.093
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C FS+ +L H+ +H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 28.7 bits (65), Expect = 0.90
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KC C + +L H+ +H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 28.3 bits (64), Expect = 1.3
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 479 YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
+KC C FS+ +L + +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.1 bits (100), Expect = 2e-05
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G + ++C+ C K F+ K NL H++ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 4e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.8 bits (89), Expect = 4e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C C K F+ K NL H+ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C C K F+ K NL H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
++C C K F+ KS+LI H++ H G +
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
++C C K F+ KS+LI H++ H G +
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
++C C K F+ K NL H++ H G +
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 35.5 bits (83), Expect = 0.003
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + ++C C K F+ K NL H+ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C C K F+ K NL H+ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C C K F+ K NL H+ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C C K F+ K NL H+ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.007
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C+ C K F+ L H H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.015
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C K F+ K NL H+ H G
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTG 37
Score = 32.5 bits (75), Expect = 0.034
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C+ C K F+ L H H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.039
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C C K F++K NL H + H G +
Sbjct: 5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.060
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K F+ K NL H++ H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37
Score = 28.6 bits (65), Expect = 0.92
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + ++C+ C K + K NL H++ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 27.8 bits (63), Expect = 1.9
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C C K F+ K NL ++ H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 42.1 bits (100), Expect = 2e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + Y+C C K F + +L HK++H G R +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
Y+C C K F + +L HK++H G R +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y+C C K F + +L +H ++H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y+C C K F + +L +H ++H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y+C C K F + +L +H ++H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y+C C K F + +L +H ++H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y+C C K F + +L +HK +H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y+C C K F + G+L +H ++H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y+C C K F + G+L +H ++H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y+C C K F + G+L +H ++H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
Y+C C K F L +HK++H G R +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
Y+C C K F L +HK++H G R +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C C K F + +L +HK +H G R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.1 bits (79), Expect = 0.009
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y+C C K F + +L +H H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.1 bits (79), Expect = 0.010
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y+C C K F + +L +HK +H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.1 bits (79), Expect = 0.010
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y+C C K F + +L +HK +H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.1 bits (79), Expect = 0.010
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y+C C K F + +L +HK +H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F + +L +HK +H G
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTG 37
Score = 32.9 bits (76), Expect = 0.032
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y+C C K F + +L +H H G R
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.7 bits (73), Expect = 0.081
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K F + +L HK++H G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37
Score = 31.4 bits (72), Expect = 0.086
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
Y+C C K F G+L +H + H G R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 28.7 bits (65), Expect = 0.90
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C C K + +L +HK++H G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37
Score = 26.3 bits (59), Expect = 5.5
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y+C C K F + +L +++H G R
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 41.8 bits (99), Expect = 2e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G + Y C+ C K FS K L H + H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + Y C C K FS K L H H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + Y C C K FS K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + Y C+ C K FS YL HM H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + Y C C K FS K L H H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
Y C C K FS KS LI H + H G +
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
Y C C K FS KS LI H + H G +
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + Y C+ C K FS YL HM H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
Y C C K FS K L H + H G +
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + Y C C K FS K L H H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + Y C C K FS K L H H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + Y C C K FS K L H H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.025
Identities = 11/25 (44%), Positives = 11/25 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C K FS K L H H G
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 32.9 bits (76), Expect = 0.031
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + Y C C K FSSK L HM+ H G +
Sbjct: 4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.043
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C C K FS K L H + H G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 29.1 bits (66), Expect = 0.67
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + Y C+ C K + K L H + H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.8
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 3/41 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + Y C C K FS K L + H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 42
Score = 41.4 bits (98), Expect = 2e-05
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + Y+C+ C K FS+K +L H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + Y+CD C K FS+KG+L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + Y+CD C K FS+KG+L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + Y+CD C K FS+KG+L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + Y+CD C K FS+K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + Y+CD C K FS+K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + Y+CD C K FS+K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + Y+CD C K FS+K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + Y+CD C K FS+K +L H +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.8 bits (86), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + Y+CD C K FS+K +L H +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.8 bits (86), Expect = 0.001
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 85 HQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQG 114
G Y+CD C K FS K SLI H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.8 bits (86), Expect = 0.001
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 139 HQGIR-----YKCDLCSKDFSYKSSLIEHKKLHQG 168
G Y+CD C K FS K SLI H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + Y+CD C K FS+K +L H +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + Y+CD C K FS+K +L H +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + Y+CD C K FS+K +L H +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y+CD C K FS+K +L H ++H G
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+CD C K FS+K +L H +H G
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + Y+C+ C K FS+ L H+ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 34.5 bits (80), Expect = 0.006
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG 529
G + Y+CD C K FS KG+L H++ H G
Sbjct: 3 SGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 34.5 bits (80), Expect = 0.007
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y CD C K FS+K +L H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 33.3 bits (77), Expect = 0.020
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + Y+C+ C K FS+ L H+ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 29.8 bits (68), Expect = 0.28
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+C+ C K + K +L H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 28.3 bits (64), Expect = 1.0
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGI 503
G + Y+CD C K FS+K +L +H +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLI---VHIRV 33
Score = 26.4 bits (59), Expect = 5.0
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G + Y+CD C K FS+K
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQK 24
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 41.9 bits (99), Expect = 2e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 523 HMKQHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR-YKCD 562
G + + C C FSR D L+ H+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 41.1 bits (97), Expect = 4e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 550 HKEIHQGIR-YKCD--LCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
G + + C C FSR D L+ H+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 6e-05
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 281 HMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
G + + C C FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 6e-05
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 362 HMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
G + + C C FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 6e-05
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 443 HMKIHQGIR-YKCD--LCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
G + + C C FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 254 HKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
G + + C C +FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 335 HKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
G + + C C +FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 416 HKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
G + + C C +FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 577 HKEIHQGIR-YKCD--LCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
G + + C C +FSR L++H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 227 HMKLHQGIR-YKCD--LCLKEFSRKDNLTEHKEIHQGIR-YKCD 266
G + + C C FSR D L+ H+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 308 HMKLHQGIR-YKCD--LCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
G + + C C FSR D L+ H+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 7e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 389 HMKLHQGIR-YKCD--LCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
G + + C C FSR D L+ H+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.0 bits (94), Expect = 1e-04
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 27 HKKIHQGIR-YKCN--LCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + + C C FSR L+ H++ H G++ +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 36.1 bits (84), Expect = 0.002
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 54 HKKIHQGIR-YKCN--LCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + + C C FSR+ L+ H H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 35.0 bits (81), Expect = 0.005
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 108 HKKLHQGIR-YKCN--LCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
G + + C C FSR+ L+ H H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 34.6 bits (80), Expect = 0.007
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 189 HKKLHQGIR-YNCD--LCSKEFSRKDNLTDHKKMHQG 222
G + + C C FSR D L+ H++ H G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39
Score = 34.6 bits (80), Expect = 0.008
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 9 YKCD--LCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+ C C FSR L+ H++ H G++ +
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.8 bits (78), Expect = 0.014
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 683 YKCD--LCSKDFSRKDNLTEHKEIHQGIR 709
+ C C FSR D L+ H+ H G++
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 33.0 bits (76), Expect = 0.030
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 470 HMKLHQGIR-YKCD--LCLKEFSRKDNLTD-RKIHQGIR-YKCD 508
G + + C C FSR D L+ R+ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 32.3 bits (74), Expect = 0.049
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 497 RKIHQGIR-YKCD--LCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
G + + C C FS L+ H + H G++
Sbjct: 4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.7 bits (70), Expect = 0.16
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 81 HMEQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
G + + C C FS L H++ H G++ +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.7 bits (70), Expect = 0.16
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 135 HMEQHQGIR-YKCD--LCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
G + + C C FS L H++ H G++ +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 28.0 bits (63), Expect = 1.7
Identities = 7/44 (15%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Query: 162 HKKLHQGIR-YKCN--LCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
G + + C C + L+ H++ H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 26.1 bits (58), Expect = 7.6
Identities = 7/26 (26%), Positives = 9/26 (34%), Gaps = 3/26 (11%)
Query: 604 HMKIHQGIR-YKCD--LCSKEFSRKD 626
G + + C C FSR D
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSD 28
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 41.3 bits (98), Expect = 2e-05
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G + ++C C K FS L H++IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + ++C C K FS L H ++H G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + ++C C K FS L H ++H G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + ++C C K FS L H ++H G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + ++C C K FS L H +IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + ++C C K FS L H +IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + ++C C K FS L H +IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + ++C C K FS L H +IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + ++C C K FS L H+ IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G + ++C C K FS L H+ IH G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G + ++C C K FS L H+ IH G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G + ++C C K FS L H+ IH G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G + ++C C K FS L H+ IH G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.002
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + ++C C K FS + L H H G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
++C C K FS L H++IH G +
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
++C C K FS S L H+++H G +
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
++C C K FS S L H+++H G +
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.013
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C K FS L H+ IH G
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTG 37
Score = 33.6 bits (78), Expect = 0.013
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + ++C C K FS + L H H G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.063
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C K FS L H+++H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 31.7 bits (73), Expect = 0.068
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G + ++C C K FS L H + H G +
Sbjct: 5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 0.82
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
G + ++C C K FS L ++IH G +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.5
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + ++C C K + L H+++H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 25.9 bits (58), Expect = 8.3
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 603 KHMKIHQGIR-YKCDLCSKEFSRK 625
G + ++C C K FS
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSIS 25
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 41.4 bits (98), Expect = 2e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + YKC+ C F + +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 41.4 bits (98), Expect = 2e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + YKC+ C F + +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 41.4 bits (98), Expect = 2e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + YKC+ C F + +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + YKC+ C +F + +L H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + YKC+ C +F + +L H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + YKC+ C +F + +L H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + YKC+ C +F + +L H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + YKC C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + YKC+ C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + YKC+ C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.3 bits (85), Expect = 0.001
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
YKC+ C F + +L H IH G
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.3 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + YKC C F + +L H+ H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.3 bits (85), Expect = 0.002
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
YKC+ C F + +L H IH G
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.0 bits (84), Expect = 0.002
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
YKC+ C F +L H+ H G
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTG 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + YKC+ C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + YKC+ C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + YKC+ C F + +L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + YKC C F + +L H+ H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G + YKC+ C F + L H +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G + YKC+ C F + L H +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 32.9 bits (76), Expect = 0.028
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C F + +L H +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 28.3 bits (64), Expect = 1.1
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + YKC C + +L H +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 27.1 bits (61), Expect = 3.1
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
G + YKC+ C F + +L IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 26.3 bits (59), Expect = 5.7
Identities = 6/23 (26%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRK 625
G + YKC+ C F +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQV 24
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + Y C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + Y C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 41.3 bits (98), Expect = 3e-05
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + Y C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + Y C++C +F L H++IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + Y C++C +F L H++IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + Y C++C +F L H++IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 40.6 bits (96), Expect = 4e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + Y C++C +F L H++IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 38.2 bits (90), Expect = 3e-04
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + Y C +C F L H +IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 37.1 bits (87), Expect = 8e-04
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y C++C F L H++ H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C++C F L H +IH G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + Y C++C F L H IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + Y C++C F L H IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 35.9 bits (84), Expect = 0.002
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C++C F L H IH G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + Y C +C F L H+ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.4 bits (80), Expect = 0.006
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
Y C++C F + +L H ++H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.4 bits (80), Expect = 0.006
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
Y C++C F + +L H ++H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.4 bits (80), Expect = 0.007
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + Y C +C F L H+ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.0 bits (79), Expect = 0.011
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + Y C++C F L H IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.0 bits (79), Expect = 0.011
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + Y C++C F L H IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.0 bits (79), Expect = 0.011
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + Y C++C F L H IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 32.9 bits (76), Expect = 0.026
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C++C F L H ++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 27.8 bits (63), Expect = 1.4
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y C +C + + L H ++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 26.3 bits (59), Expect = 5.7
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
G + Y C++C F L +IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 42.6 bits (100), Expect = 3e-05
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 11/68 (16%)
Query: 559 YKCDLCSKEFSRKDNLTEH-KEIHQGIRYK---------CDLCSKKFSRKLNLTKHMKIH 608
C + FS L H H G + C K F K L H+++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 609 QGIR-YKC 615
G +
Sbjct: 86 TGEKSGPS 93
Score = 41.1 bits (96), Expect = 1e-04
Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 11/68 (16%)
Query: 9 YKCDLCSKEFSRKYNLTDH-KKIHQGIRYK---------CNLCSKEFSRKYNLTDHKKIH 58
C + FS + L H H G + C K F KY L +H ++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 59 QGIR-YKC 65
G +
Sbjct: 86 TGEKSGPS 93
Score = 40.7 bits (95), Expect = 2e-04
Identities = 15/68 (22%), Positives = 21/68 (30%), Gaps = 11/68 (16%)
Query: 236 YKCDLCLKEFSRKDNLTEH-KEIHQGIRYK---------CDLCSKKFSRKLNLTKHMKIH 285
C + FS L H H G + C K F K L H+++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 286 QGIR-YKC 292
G +
Sbjct: 86 TGEKSGPS 93
Score = 39.6 bits (92), Expect = 4e-04
Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 11/68 (16%)
Query: 505 YKCDLCSKEFSSKGNLTEHM-KQHQGIRYK---------CDLCSKEFSRKDNLTEHKEIH 554
C + FS+ L H+ +H G + C K F K L H +H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 555 QGIR-YKC 561
G +
Sbjct: 86 TGEKSGPS 93
Score = 38.8 bits (90), Expect = 8e-04
Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Query: 198 YNCDLCSKEFSRKDNLTDH-KKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKE 256
C + FS L H H G + H +C K F K L H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQ--NNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 257 IHQGIR-YKC 265
+H G +
Sbjct: 84 VHTGEKSGPS 93
Score = 38.4 bits (89), Expect = 0.001
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 22/87 (25%)
Query: 290 YKCDLCSKEFSRKGNLTKHM-KLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCD 347
C + FS L H+ H G +C E +C
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE-------------------ECP 66
Query: 348 LCSKKFSRKLNLTKHMKIHQGIR-YKC 373
K F K L H+++H G +
Sbjct: 67 REGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 38.4 bits (89), Expect = 0.001
Identities = 17/87 (19%), Positives = 25/87 (28%), Gaps = 22/87 (25%)
Query: 371 YKCDLCSKEFSRKGNLTKHM-KLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCD 428
C + FS L H+ H G +C E +C
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE-------------------ECP 66
Query: 429 LCSKKFSRKLNLTKHMKIHQGIR-YKC 454
K F K L H+++H G +
Sbjct: 67 REGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 37.6 bits (87), Expect = 0.002
Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 21/86 (24%)
Query: 452 YKCDLCSKEFSRKGNLTKHM-KLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIRYKCDL 509
C + FS L H+ H G +C E +C
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE------------------ECPR 67
Query: 510 CSKEFSSKGNLTEHMKQHQGIR-YKC 534
K F +K L H++ H G +
Sbjct: 68 EGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 36.5 bits (84), Expect = 0.005
Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 11/68 (16%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQ-HQGIRYK---------CDLCSKDFSYKSSLIEHKKLH 112
C + FS L H+ H G + C K F K L+ H ++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 113 QGIR-YKC 119
G +
Sbjct: 86 TGEKSGPS 93
Score = 34.9 bits (80), Expect = 0.018
Identities = 14/68 (20%), Positives = 19/68 (27%), Gaps = 11/68 (16%)
Query: 90 YKCDLCSKDFSYKSSLIEH-KKLHQGIRYK---------CNLCSKEFSRNCYLTEHMEQH 139
C + FS L+ H H G + C K F L H+ H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 140 QGIR-YKC 146
G +
Sbjct: 86 TGEKSGPS 93
Score = 33.0 bits (75), Expect = 0.096
Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 21/81 (25%)
Query: 144 YKCDLCSKDFSYKSSLIEH-KKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIRYNCD 201
C + FS L+ H H G ++C E C
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE-------------------ECP 66
Query: 202 LCSKEFSRKDNLTDHKKMHQG 222
K F K L +H ++H G
Sbjct: 67 REGKSFKAKYKLVNHIRVHTG 87
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 41.0 bits (97), Expect = 3e-05
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + +KC C K F H++ H G + +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 293
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 374
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 455
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCD 616
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 37.1 bits (87), Expect = 9e-04
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 589
G + +KC+ C K F H+ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+KC+ C K F S H++ H G + +
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+KC+ C K F S H++ H G + +
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 320
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 401
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCD 482
G + +KC+ C K F H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.002
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+KC+ C K F H++ H G + +
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 93
G + +KC C K F N H H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCD 562
G + +KC+ C K F H+ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 34.5 bits (80), Expect = 0.007
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 266
G + +KC+ C K F H+ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 34.5 bits (80), Expect = 0.007
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 347
G + +KC+ C K F H+ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 34.5 bits (80), Expect = 0.007
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCD 428
G + +KC+ C K F H+ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.015
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCD 147
G + +KC C K F N H H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.016
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC+ C K F H+ H G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 31.8 bits (73), Expect = 0.063
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCD 535
G + +KC+ C K F + H + H G +
Sbjct: 5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.090
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C+ C K F H++ H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 27.9 bits (63), Expect = 1.6
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + +KC C K ++ H++ H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 27.1 bits (61), Expect = 3.2
Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCD 508
G + +KC+ C K F ++ H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G++ Y CN C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G++ Y C+ C K F K L H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G++ Y C+ C K F K L H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G++ Y C+ C K F K L H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G++ Y C+ C K F K L H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G++ Y CN C K F YL H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
G++ Y C+ C K F K L H H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
G++ Y C+ C K F K L H H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
G++ Y C+ C K F K L H H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
G++ Y C+ C K F K L H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
Y C+ C K F KS LI H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
Y C+ C K F KS LI H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.006
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
Y C+ C K F K L H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 33.2 bits (77), Expect = 0.017
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G++ Y CN C K F YL H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 33.2 bits (77), Expect = 0.023
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C+ C K F K L H H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 32.1 bits (74), Expect = 0.050
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 30.9 bits (71), Expect = 0.13
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
Y C+ C K F SK L H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 0.70
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G++ Y CN C K + K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 27.1 bits (61), Expect = 3.6
Identities = 10/45 (22%), Positives = 13/45 (28%), Gaps = 9/45 (20%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGIR-----YKC 507
G++ Y C+ C K F K L IH
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLI---IHTRTHTGESGPSS 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + Y+CN C K F K L H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + Y+C+ C K F K L H+ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G + Y+C+ C K F +KS LI H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G + Y+C+ C K F +KS LI H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + Y+C+ C K F K L H+ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + Y+CN C K F L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + Y+C+ C K F K L H+ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + Y+C+ C K F K L H+ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + Y+C+ C K F K L H+ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 33.7 bits (78), Expect = 0.012
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y+C+ C K F K L H++ H G
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAG 37
Score = 33.7 bits (78), Expect = 0.016
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C+ C K F K L H+ H G
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAG 37
Score = 32.9 bits (76), Expect = 0.027
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + Y+CN C K F L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 32.9 bits (76), Expect = 0.028
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + Y C+ C K F K L H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 30.6 bits (70), Expect = 0.17
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + Y+CN C K + +K L H++ H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 30.2 bits (69), Expect = 0.23
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG 529
G + Y+C+ C K F K L H + H G
Sbjct: 5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 26.7 bits (60), Expect = 4.7
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQ 501
G + Y+C+ C K F K L +H+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLI---VHE 32
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 28 KKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + + C+ C K FS K L H++ H + +
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.8 bits (94), Expect = 1e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
+ C C K FS KS L+ H++ H + +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.8 bits (94), Expect = 1e-04
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
+ C C K FS KS L+ H++ H + +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
+ C C K FS K L H++ H + +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
+ C C K FS K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
+ C C K FS K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
+ C C K FS K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
+ C C K FS K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
+ C C K FS K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ C C K FS K L H++ H
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
+ C C K FS K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.4 bits (80), Expect = 0.007
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 55 KKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + + C+ C K FS YL H + H +
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.4 bits (80), Expect = 0.007
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
+ C+ C K FS YL H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.0 bits (79), Expect = 0.010
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
+ C C K FSSK L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 31.0 bits (71), Expect = 0.13
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
+ C C K FS K L H++ H
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 27.9 bits (63), Expect = 1.4
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
+ C+ C K + K L H++ H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 27.5 bits (62), Expect = 2.2
Identities = 9/34 (26%), Positives = 11/34 (32%), Gaps = 8/34 (23%)
Query: 479 YKCDLCLKEFSRKDNLTDRKIHQGIR-----YKC 507
+ C C K FS K L +HQ
Sbjct: 11 FGCSCCEKAFSSKSYLL---VHQQTHAEEKPSGP 41
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
SCOP: k.12.1.1
Length = 46
Score = 40.6 bits (96), Expect = 6e-05
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCN 66
G + KC C K F K L H++ H + +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 120
KC C K F +KS LI H++ H + +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCN 174
KC C K F +KS LI H++ H + +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCN 39
KC C K F K L H++ H + +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 36.4 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 36.4 bits (85), Expect = 0.002
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 35.6 bits (83), Expect = 0.003
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
G + KC C K F K L H+ H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
KC C K F K L H+ H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G + KC C K F K L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.7 bits (78), Expect = 0.013
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
KC C K F K L H+ H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.7 bits (78), Expect = 0.013
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
KC C K F K L H+ H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.7 bits (78), Expect = 0.013
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
KC C K F K L H+ H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.7 bits (78), Expect = 0.016
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
KC C K F K L H+ H
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 32.1 bits (74), Expect = 0.050
Identities = 9/41 (21%), Positives = 11/41 (26%), Gaps = 2/41 (4%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G + KC C K F L H H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.8 bits (73), Expect = 0.060
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
KC C K F K L H + H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.10
Identities = 9/41 (21%), Positives = 11/41 (26%), Gaps = 2/41 (4%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
G + KC C K F L H H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + C C K F K L H++ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 28.7 bits (65), Expect = 0.86
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
G + KC C K + +K L H++ H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 26.0 bits (58), Expect = 7.6
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 2/31 (6%)
Query: 479 YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
KC C K F K L ++ H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 40.0 bits (94), Expect = 6e-05
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 312
+ GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 6e-05
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 393
+ GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 6e-05
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLH 474
+ GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 285
GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 366
GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 447
GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIH 608
GI+ ++C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 37.3 bits (87), Expect = 6e-04
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIH 554
+ GI+ ++C C + FSR D+L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.5 bits (85), Expect = 0.001
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMH 220
+ GI+ + C C + FSR D+L H+K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.001
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIH 258
+ GI+ ++C C + FSR D+L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.001
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIH 339
+ GI+ ++C C + FSR D+L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.001
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIH 420
+ GI+ ++C C + FSR D+L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.001
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIH 581
GI+ ++C C + FSR D+L H++ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.002
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQH 85
+ GI+ ++C C + FSR+ +L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.4 bits (82), Expect = 0.003
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIH 58
+ GI+ ++C C + FSR +L H+K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.0 bits (81), Expect = 0.004
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQH 139
+ GI+ ++C C + FSR+ +L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.5 bits (77), Expect = 0.016
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIH 705
++C C + FSR D+L H++ H
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.018
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 498 KIHQGIR-YKCDLCSKEFSSKGNLTEHMKQH 527
+ GI+ ++C C + FS +L H K+H
Sbjct: 4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.2 bits (71), Expect = 0.091
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIH 500
+ GI+ ++C C + FSR D+L RK H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.2 bits (71), Expect = 0.098
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIH 31
++C C + FSR +L H+K H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.0 bits (68), Expect = 0.25
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 604 HMKIHQGIR-YKCDLCSKEFSRKD 626
+ GI+ ++C C + FSR D
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSD 25
Score = 29.6 bits (67), Expect = 0.34
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLH 112
GI+ ++C C + FS L H+K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.6 bits (67), Expect = 0.34
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLH 166
GI+ ++C C + FS L H+K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 40.2 bits (95), Expect = 7e-05
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
+ ++C+ C + F+ K +L H++IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
+ ++C C + F+ K +L +H +IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
+ ++C C + F+ K +L +H +IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
+ ++C C + F+ K +L +H +IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
+ ++C C + F+ K +L +H +IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
+ ++C C + F+ K +L +H+ IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
+ ++C C + F+ K +L +H ++H G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
+ ++C C + F+ K +L +H ++H G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
+ ++C C + F+ K +L +H ++H G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
++C C + F+ K +L H++IH G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.005
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C + F+ K +L +H+ IH G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.005
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
++C C + F+ KS L +H+++H G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 35.2 bits (82), Expect = 0.005
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
++C C + F+ KS L +H+++H G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
+ ++C C + F+ K +L +H+ IH G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 34.1 bits (79), Expect = 0.011
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
+ ++C C + F+ K +L +H+ IH G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 34.1 bits (79), Expect = 0.011
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
+ ++C C + F+ K +L +H+ IH G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 34.1 bits (79), Expect = 0.011
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
+ ++C C + F+ K +L +H+ IH G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 33.7 bits (78), Expect = 0.017
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
+ ++C+ C + F+ +L +H H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.052
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
+ + C C + F+ K +L H+++H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.055
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
+ ++C+ C + F+ +L +H H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 31.4 bits (72), Expect = 0.11
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
++C C + F+ K +L +H + H G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 31.0 bits (71), Expect = 0.14
Identities = 7/35 (20%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
+ ++C+ C + + K +L +H+++H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 26.4 bits (59), Expect = 6.7
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
+ ++C C + F+ K +L ++IH G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 40.2 bits (95), Expect = 8e-05
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G Y+C C K FSRK L H+K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G Y+C C K FSRK L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G Y+C C K FSRK L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G Y+C C K FSRK L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 38.2 bits (90), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G Y+C C K FSRK L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 37.5 bits (88), Expect = 5e-04
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G Y+C C K FSRKD L H++ H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.9 bits (84), Expect = 0.002
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G Y+C C K FSRKD L H++ H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K FSRKD L H++ H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y+C C K FSRK L H+K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G Y+C C K FSRK L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G Y+C C K FSRK L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G Y+C C K FSRK L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
Y+C C K FS K L+ H+K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
Score = 35.2 bits (82), Expect = 0.004
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
Y+C C K FS K L+ H+K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G Y+C C K FSRKD L H++ H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G Y+C C K FSRKD L H++ H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 34.8 bits (81), Expect = 0.005
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G Y+C C K FSRKD L H++ H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 34.4 bits (80), Expect = 0.009
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G Y C C K FSRKD L H+K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 32.5 bits (75), Expect = 0.038
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G Y+C C K FSR L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 31.3 bits (72), Expect = 0.097
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G Y+C C K FSR L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 30.5 bits (70), Expect = 0.21
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y+C C K FS K L H K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
Score = 28.6 bits (65), Expect = 0.79
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G Y+C C K + K L H+K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 27.5 bits (62), Expect = 2.0
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
G Y+C C K FSRKD L +K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 28 KKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQGIR-YKC 65
G Y+C+ C K F+RK L H++ H G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 561
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIR-YKC 588
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKC 38
Y+C C K F+RK L H++ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 119
Y+C C K F+ K LI H++ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQGIR-YKC 173
Y+C C K F+ K LI H++ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 292
Y+C C K F+RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 373
Y+C C K F+RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 454
Y+C C K F+RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIR-YKC 615
Y+C C K F+RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 265
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 346
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIR-YKC 427
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 283 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 319
G Y+C C K F+RK L H + H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 364 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 400
G Y+C C K F+RK L H + H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 445 KIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQGIR-YKC 481
G Y+C C K F+RK L H + H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F+RKD L H+ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAG 35
Score = 34.0 bits (79), Expect = 0.010
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQGIR-YKC 534
G Y+C C K F+ K L H + H G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 32.9 bits (76), Expect = 0.028
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 55 KKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 92
G Y+C+ C K F+R L H H G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 31.7 bits (73), Expect = 0.062
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIR-YKC 146
Y+C+ C K F+R L H H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 31.7 bits (73), Expect = 0.067
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y C C K F+RKD L H++ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAG 35
Score = 28.6 bits (65), Expect = 0.92
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 479 YKCDLCLKEFSRKDNLTD-RKIHQGIR-YKC 507
Y+C C K F+RKD L ++ H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 27.5 bits (62), Expect = 2.4
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNC 200
Y+C+ C K + K L H++ H G +
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + ++C C FS +L KH++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 37.2 bits (87), Expect = 0.001
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + ++C C FS +L H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G + ++C C +FS+ SL +H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G + ++C C +FS+ SL +H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + ++C C FS +C L +H+ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 35.6 bits (83), Expect = 0.003
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + ++C C FS +L +H H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 34.9 bits (81), Expect = 0.006
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + ++C C FS +C L +H+ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 34.5 bits (80), Expect = 0.007
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + ++C C FS +L +H H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 33.3 bits (77), Expect = 0.017
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
++C C FS +L H + H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHER 37
Score = 33.3 bits (77), Expect = 0.022
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
++C C +FS +L +H H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.9 bits (76), Expect = 0.026
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + C C FS +L H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.6 bits (75), Expect = 0.041
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + ++C C FS +L +H H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.6 bits (75), Expect = 0.041
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + ++C C FS +L +H H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.6 bits (75), Expect = 0.041
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + ++C C FS +L +H H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.2 bits (74), Expect = 0.047
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
++C C FS +L +H++ H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHER 37
Score = 27.9 bits (63), Expect = 1.5
Identities = 6/42 (14%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCD 201
G + ++C C + + +L +H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 38.7 bits (91), Expect = 3e-04
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDH-KKIHQGIR-YKCN 66
G + Y+C C K F + +L H + H G + +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQGIR-YKC 292
G + Y+C C K F + +L +H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQGIR-YKC 373
G + Y+C C K F + +L +H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQGIR-YKC 454
G + Y+C C K F + +L +H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHM-KIHQGIR-YKC 615
G + Y+C C K F + +L +H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 7/44 (15%)
Query: 84 QHQGI-----RYKCDLCSKDFSYKSSLIEH-KKLHQGIR-YKCN 120
Y+C C K F +SLI H + H G + +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 7/44 (15%)
Query: 138 QHQGI-----RYKCDLCSKDFSYKSSLIEH-KKLHQGIR-YKCN 174
Y+C C K F +SLI H + H G + +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 35.2 bits (82), Expect = 0.005
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEH-KEIHQGIR-YKC 588
G + Y+C C K F + +L H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.5 bits (80), Expect = 0.007
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQ-HQGIR-YKC 92
G + Y+C C K F +N L H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKL-HQGIR-YKC 319
G + Y+C C K F + +L +H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKL-HQGIR-YKC 400
G + Y+C C K F + +L +H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.1 bits (79), Expect = 0.012
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKL-HQGIR-YKC 481
G + Y+C C K F + +L +H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.5 bits (75), Expect = 0.036
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEH-KEIHQGIR-YKC 561
G + Y+C C K F + +L H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.5 bits (75), Expect = 0.038
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQ-HQGIR-YKC 146
G + Y+C C K F +N L H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.2 bits (74), Expect = 0.057
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKC 265
G + Y+C C K F + +L H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.2 bits (74), Expect = 0.057
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKC 346
G + Y+C C K F + +L H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.2 bits (74), Expect = 0.057
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEH-KEIHQGIR-YKC 427
G + Y+C C K F + +L H + H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.2 bits (74), Expect = 0.060
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 9 YKCDLCSKEFSRKYNLTDH-KKIHQGIR-YKCN 39
Y+C C K F + +L H + H G + +
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 29.8 bits (68), Expect = 0.32
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLT--DRKIHQGIR-YKC 507
G + Y+C C K F + +L R H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 29.5 bits (67), Expect = 0.42
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 683 YKCDLCSKDFSRKDNLTEH-KEIHQG 707
Y+C C K F + +L H + H G
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTG 38
Score = 29.5 bits (67), Expect = 0.53
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQ-HQGIR-YKC 534
G + Y+C C K F +L H + H G +
Sbjct: 4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 27.5 bits (62), Expect = 2.6
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDH-KKMHQG 222
G + Y C C K F + +L H + H G
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G + + C+ C K F L H+++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G + + CD C K+F Y S+L H+++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.4 bits (85), Expect = 0.002
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G + + CD C K+F Y S+L H+++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 281 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 362 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 443 HMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G + + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G + + CD C K F L H+ +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 34.5 bits (80), Expect = 0.008
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 227 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G + + CD C K F L H+ +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 34.5 bits (80), Expect = 0.008
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 308 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G + + CD C K F L H+ +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 34.5 bits (80), Expect = 0.008
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 389 HMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G + + CD C K F L H+ +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 34.5 bits (80), Expect = 0.008
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G + + CD C K F L H+ +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 32.9 bits (76), Expect = 0.025
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
+ CD C K F L H+++H G
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMG 37
Score = 32.9 bits (76), Expect = 0.029
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ CD C K+F L H+ +H G
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMG 37
Score = 32.6 bits (75), Expect = 0.033
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + + CD C K F L H+++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 32.6 bits (75), Expect = 0.037
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G + + C+ C K F L H H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 31.4 bits (72), Expect = 0.11
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G + + C+ C K F L H H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 31.0 bits (71), Expect = 0.11
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 497 RKIHQGIR-YKCDLCSKEFSSKGNLTEHMKQHQG 529
G + + CD C K F L H + H G
Sbjct: 4 GSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 30.6 bits (70), Expect = 0.19
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G + + C+ C K + + L H+++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 27.9 bits (63), Expect = 1.6
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 470 HMKLHQGIR-YKCDLCLKEFSRKDNLTDRKIHQGI 503
G + + CD C K F L IHQ +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALR---IHQRV 34
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y+C C K F +K +LT H++IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y+C C K F +K +LT H++IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
Y+C C K F +K +LT H +IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
Y+C C K F +K +LT H +IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
Y+C C K F +K +LT H +IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
Y+C C K F +K +LT H +IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
Y+C C K F +KG+LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
Y+C C K F +KG+LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
Y+C C K F +KG+LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQG 260
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQG 341
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQG 422
Y+C C K F +K +LT H+ IH G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.5 bits (80), Expect = 0.007
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
Y+C C K F K SL H+++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 34.5 bits (80), Expect = 0.007
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
Y+C C K F K SL H+++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 32.2 bits (74), Expect = 0.048
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y+C C K F KG+LT H + H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 31.8 bits (73), Expect = 0.060
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y C C K F +K +LT H+++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 29.8 bits (68), Expect = 0.31
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQG 87
Y+C C K F + LT H H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 29.8 bits (68), Expect = 0.31
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQG 141
Y+C C K F + LT H H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 29.1 bits (66), Expect = 0.57
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQG 195
Y+C C K + K +LT H+++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 26.8 bits (60), Expect = 3.7
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 479 YKCDLCLKEFSRKDNLTDRKIHQGI 503
Y+C C K F +K +LT +H+ I
Sbjct: 11 YECQECGKSFRQKGSLT---LHERI 32
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 38.0 bits (88), Expect = 4e-04
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCS 42
C++C K F Y+L HK H G + Y S
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 37.2 bits (86), Expect = 0.001
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 35 RYKCNLCSKEFSRKYNLTDHKKIHQGIR-YKCNLCS 69
+ C +C K F Y+L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 36.1 bits (83), Expect = 0.003
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 531 RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCS 565
+ C++C K F +L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 36.1 bits (83), Expect = 0.003
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIHQGIR-YKCDLCS 592
+ C++C K F +L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 35.3 bits (81), Expect = 0.004
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 262 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCS 296
+ C++C K F +L +H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 35.3 bits (81), Expect = 0.004
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 343 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCS 377
+ C++C K F +L +H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 35.3 bits (81), Expect = 0.004
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 424 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCS 458
+ C++C K F +L +H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 35.3 bits (81), Expect = 0.004
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 585 RYKCDLCSKKFSRKLNLTKHMKIHQGIR-YKCDLCS 619
+ C++C K F +L +H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.010
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQHQGIR-YKCDLCS 538
+ C++C K F +L H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.011
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 235 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCS 269
+ C++C K F +L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.011
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 316 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCS 350
+ C++C K F +L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 34.1 bits (78), Expect = 0.011
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIHQGIR-YKCDLCS 431
+ C++C K F +L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 33.8 bits (77), Expect = 0.018
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 89 RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCS 123
+ C++C K F L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 33.8 bits (77), Expect = 0.018
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 143 RYKCDLCSKDFSYKSSLIEHKKLHQGIR-YKCNLCS 177
+ C++C K F L HK H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLC 322
+ C++C K F +L +H H G + Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLC 403
+ C++C K F +L +H H G + Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLHQGIR-YKCDLC 484
+ C++C K F +L +H H G + Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.037
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIHQG 707
+ C++C K F +L HK H G
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSG 37
Score = 32.2 bits (73), Expect = 0.053
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 62 RYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCS 96
+ C +C K F +L H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 32.2 bits (73), Expect = 0.053
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 116 RYKCNLCSKEFSRNCYLTEHMEQHQGIR-YKCDLCS 150
+ C +C K F +L H H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 31.8 bits (72), Expect = 0.077
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 197 RYNCDLCSKEFSRKDNLTDHKKMHQG 222
+ C++C K F +L HK H G
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSG 37
Score = 29.1 bits (65), Expect = 0.76
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 170 RYKCNLCSKEYFFKRNLTEHKKLHQGIR-YNCDLCS 204
+ C +C K + +L HK H G + Y+ S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 26.4 bits (58), Expect = 7.0
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 478 RYKCDLCLKEFSRKDNLTD-RKIHQGIR-YKCDLCS 511
+ C++C K F +L + H G + Y S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 43.3 bits (101), Expect = 5e-04
Identities = 9/66 (13%), Positives = 18/66 (27%), Gaps = 3/66 (4%)
Query: 193 HQGIRYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLT 252
++G + ++ + G H Y+C +C +L
Sbjct: 141 NEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHG---YQCHVCSAVLFSPLDLD 197
Query: 253 EHKEIH 258
H H
Sbjct: 198 AHVASH 203
Score = 42.1 bits (98), Expect = 0.001
Identities = 12/67 (17%), Positives = 16/67 (23%), Gaps = 1/67 (1%)
Query: 489 SRKDNLTDRKIHQGIRYKCDLCSKEFSSKGNLTEHM-KQHQGIRYKCDLCSKEFSRKDNL 547
DN + S S G Y+C +CS +L
Sbjct: 137 GNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDL 196
Query: 548 TEHKEIH 554
H H
Sbjct: 197 DAHVASH 203
Score = 40.6 bits (94), Expect = 0.003
Identities = 10/50 (20%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Query: 533 KCDLCSKEFSRKDNLTEHKEIH-QGIRYKCDLCSKEFSRKDNLTEHKEIH 581
+ S S+ G Y+C +CS +L H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.8 bits (92), Expect = 0.006
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 1/50 (2%)
Query: 291 KCDLCSKEFSRKGNLTKHMKLH-QGIRYKCDLCLKEFSRKDNLTEHKEIH 339
+ S S+ G Y+C +C +L H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.8 bits (92), Expect = 0.006
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 1/50 (2%)
Query: 372 KCDLCSKEFSRKGNLTKHMKLH-QGIRYKCDLCLKEFSRKDNLTEHKEIH 420
+ S S+ G Y+C +C +L H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.5 bits (91), Expect = 0.007
Identities = 10/50 (20%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 91 KCDLCSKDFSYKSSLIEHKKLH-QGIRYKCNLCSKEFSRNCYLTEHMEQH 139
+ S S + + G Y+C++CS L H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.011
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 560 KCDLCSKEFSRKDNLTEHKEIH-QGIRYKCDLCSKKFSRKLNLTKHMKIH 608
+ S S+ G Y+C +CS L+L H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.011
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 190 KKLHQGIRYNCDLCSKEFSRKDNLTDHKKMH 220
G Y C +CS +L H H
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.012
Identities = 9/41 (21%), Positives = 13/41 (31%), Gaps = 5/41 (12%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHGTLGEPS 722
Y+C +CS +L H H + TL
Sbjct: 180 GYQCHVCSAVLFSPLDLDAHVASH-----GLHGNMTLTSSE 215
Score = 37.5 bits (86), Expect = 0.024
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 84 QHQGIRYKCDLCSKDFSYKSSLIEHKKLH 112
G Y+C +CS L H H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.5 bits (86), Expect = 0.024
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 138 QHQGIRYKCDLCSKDFSYKSSLIEHKKLH 166
G Y+C +CS L H H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.5 bits (86), Expect = 0.027
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 41 CSKEFSRKYNLTDHKKIH-QGIRYKCNLCSKEFSRNCYLTEHMEQH 85
S S+ G Y+C++CS L H+ H
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.034
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 258 HQGIRYKCDLCSKKFSRKLNLTKHMKIH 285
G Y+C +CS L+L H+ H
Sbjct: 176 SSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.034
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 339 HQGIRYKCDLCSKKFSRKLNLTKHMKIH 366
G Y+C +CS L+L H+ H
Sbjct: 176 SSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.034
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 420 HQGIRYKCDLCSKKFSRKLNLTKHMKIH 447
G Y+C +CS L+L H+ H
Sbjct: 176 SSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.034
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 10 KCDLCSKEFSRKYNLTDHKKIH-QGIRYKCNLCSKEFSRKYNLTDHKKIH 58
+ S S+ G Y+C++CS +L H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.081
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 283 KIHQGIRYKCDLCSKEFSRKGNLTKHMKLH 312
G Y+C +CS +L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.081
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 364 KIHQGIRYKCDLCSKEFSRKGNLTKHMKLH 393
G Y+C +CS +L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.081
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 445 KIHQGIRYKCDLCSKEFSRKGNLTKHMKLH 474
G Y+C +CS +L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.092
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 2 KLHQGIGYKCDLCSKEFSRKYNLTDHKKIH 31
G GY+C +CS +L H H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 0.58
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 145 KCDLCSKDFSYKSSLIEHKKLH-QGIRYKCNLCSKEYFFKRNLTEHKKLH 193
+ S S + + G Y+C++CS F +L H H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 42.9 bits (100), Expect = 5e-04
Identities = 70/422 (16%), Positives = 120/422 (28%), Gaps = 130/422 (30%)
Query: 659 LEFFKTEQNTTLGKLNKILHQDIRYKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHGTL 718
++F E + + +F KD K I + I +
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFV-------DNFDCKDVQDMPKSILSKEEIDHI----I 55
Query: 719 GEPSGV-----MFEKLPSDQWFEQKLDHFNIEEPRTWKQRYFVNSTWYKHGGPIFLMIGG 773
V +F L S Q E+ + F +EE V YK FLM
Sbjct: 56 MSKDAVSGTLRLFWTLLSKQ--EEMVQKF-VEE---------VLRINYK-----FLMSPI 98
Query: 774 EGEASAKWMVEGTWLDYAHNHNALAVQVEHRFYGKSHPLSDLSVESLQ-YLSAEQALADL 832
+ E M+ +++ + R Y + + +V LQ YL QAL +L
Sbjct: 99 KTEQRQPSMMTRMYIEQ---RD--------RLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 833 AYFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASG----PLRAVV 888
K + L+ G + SG L +
Sbjct: 148 R--------------PAKNV--------------------LIDG-VLGSGKTWVALDVCL 172
Query: 889 DFPE----YFGV--VADALATVSTECVKAVQTATHTISKMLKSPSDA------------- 929
+ F + + ++ +Q + I S SD
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 930 --KYLTEQFKLCTPL----DINNAKDVSSF-----------VESLADNIAGVVQYNKDNR 972
+ L + L ++ NAK ++F + + D ++ +
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 973 ESSNHITIDDLCALLMDKKQDPVARYAAVNDLILSKEKKK-NPCVDYKYEKMIEDMKNTS 1031
S +T D++ +LL +Y L +E NP + I D T
Sbjct: 293 HHSMTLTPDEVKSLL--------LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT- 343
Query: 1032 WD 1033
WD
Sbjct: 344 WD 345
Score = 41.4 bits (96), Expect = 0.002
Identities = 80/593 (13%), Positives = 169/593 (28%), Gaps = 157/593 (26%)
Query: 16 KEFSRKYNLTDHKKIHQGIRYKCN---LCSKEFS-------------RKYNLTDHKKIHQ 59
++F + ++K + I+ + + ++ + KYN++ + +
Sbjct: 80 QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 60 GIRYKCNLCSKEFSRNCYLTEH-MEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYK 118
+R E + + G S K+ + + + +
Sbjct: 140 -LR----QALLELRPAKNVLIDGV---LG------------SGKTWVA--LDVCLSYKVQ 177
Query: 119 CNLCSKEF---SRNCYLTEH-MEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCN 174
C + K F +NC E +E Q L + +S +H I+ + +
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQ------KLLYQIDPNWTSRSDH---SSNIKLRIH 228
Query: 175 LCSKEYFFKRNLTEHKKLHQGIRYNC-----DLCSKE----F---------SRKDNLTDH 216
E R L + K NC ++ + + F +R +TD
Sbjct: 229 SIQAE---LRRLLKSKPYE-----NCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280
Query: 217 KKMHQGNLTKHMKL-HQGIRYKCDLCLKEFSRKDNLTEHK---EIHQGIRYKCDLCSKKF 272
T H+ L H + D + + E+ + + ++
Sbjct: 281 LS---AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337
Query: 273 SRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNL 332
L + K CD KL I + L + L
Sbjct: 338 RDGLATWDNWK-----HVNCD----------------KLTTII----ESSL------NVL 366
Query: 333 T--EHKEIHQGIRYKCDLCSKKFSRKLNLT-KHMKI--HQGIRYKCDLCSKEFSRKGNLT 387
E+++ + L F ++ + + I+ + + + +
Sbjct: 367 EPAEYRK-----MFD-RLSV--FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 388 KHMK-----LHQGIRYKCDLCLKEFSRKDNLTE-HKEIHQGIRYKCDLCSKKFSRKLNLT 441
K K + + L+ + +N H+ I S L
Sbjct: 419 KQPKESTISIP-------SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLI-PPYLD 470
Query: 442 KHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKL-----HQGIRYKCDLCLKEFSRKDNLTD 496
++ + I + L + E + L + + L Q IR+ S + L
Sbjct: 471 QY--FYSHIGHH--LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
Query: 497 RKIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQG--IRYK-CDLCSKEFSRKDN 546
K ++ Y CD K + + + + + I K DL +D
Sbjct: 527 LKFYK--PYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE 577
Score = 31.4 bits (70), Expect = 2.1
Identities = 46/352 (13%), Positives = 91/352 (25%), Gaps = 84/352 (23%)
Query: 428 DLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRYK-CDLCLK 486
L + N T I+ + S + L + +K Y+ C L L
Sbjct: 204 KLLYQI---DPNWTSRSDHSSNIKLRIH------SIQAELRRLLKSKP---YENCLLVL- 250
Query: 487 EFSRKDNLTDRKIHQGIRYKC-------DLCSKEFSSKGNLT----EHMKQHQGIRYKCD 535
N+ + K C +F S T +H
Sbjct: 251 -----LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 536 LCSKEFS-RKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKK 594
L K R +L E+ + + ++ ++ + CD +
Sbjct: 306 LLLKYLDCRPQDLPR--EVLTTNPRRLSIIAESIRDGLATWDNWK-----HVNCDKLTTI 358
Query: 595 FSRKLNLTKHMKIHQGIRYKCDLCSKEFS--RKD--IPYEVTV----KEESYEGDSIN-- 644
LN+ + + + + S IP + + +
Sbjct: 359 IESSLNVLEPAEYRK--MFD------RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 645 ------VEENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIRYKCDLCSKDFS--RKD 696
VE+ ++ + + L++ + S D D
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470
Query: 697 N-----LTEH-KEIHQGIRVSDINHGTLGEPSGVMFEKLPSD-QWFEQKLDH 741
+ H K I R++ +F + D ++ EQK+ H
Sbjct: 471 QYFYSHIGHHLKNIEHPERMT-------------LFRMVFLDFRFLEQKIRH 509
Score = 30.6 bits (68), Expect = 3.8
Identities = 94/621 (15%), Positives = 181/621 (29%), Gaps = 190/621 (30%)
Query: 523 HMKQHQG-IRYKC-DLCS-------KEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDN 573
HM G +Y+ D+ S F KD K I L +E D+
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI---------LSKEEI---DH 53
Query: 574 LTEHKEIHQGIRYKCD-LCSK------KFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKD 626
+ K+ G L SK KF ++ + + I+ + ++ S
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ----RQPSMMT 109
Query: 627 IPYEVTVKEESYEGDSINVEENNGNDAVTR--------DCLEFFKTEQNTTL------GK 672
Y + ++ Y + + + N V+R L + +N + GK
Sbjct: 110 RMY-IEQRDRLYNDNQVFAKYN-----VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163
Query: 673 --LNKILHQDIRYKCDLCSKDFSRKDNLTEHKEIHQGIRVSDINHGTLGEPSGV--MFEK 728
+ + + +C + DF +I +N P V M +K
Sbjct: 164 TWVALDVCLSYKVQCKM---DF----------KIFW------LNLKNCNSPETVLEMLQK 204
Query: 729 LPS--DQWFEQKLDH-----FNIEEPRTWKQRYFVNSTWYKHGGPIFLMIGGEGEASAKW 781
L D + + DH I + +R + Y++ L++
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP-YENC----LLV---------- 249
Query: 782 MVEGTWLD--YAHNH-NALAVQ----VEHRFYGKSHPLS-----DLSVESLQY-LSAEQA 828
L NA + + RF + LS +S++ L+ ++
Sbjct: 250 ------LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 829 LADLAYFITSMNTLYSLPAHTKWIA------FGGSYPGALAAWLRYKYPHL--VHGAMSA 880
+ L ++ LP S LA W +K+ + + + +
Sbjct: 304 KSLLLKYLD--CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 881 S----GP--LRAVVD----FPEYFGVVADALATV----STECVKAVQTATHTISKMLKSP 926
S P R + D FP + L+ + V V H S + K P
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Query: 927 SDAKY--LTEQFKLCTPLDINNAKDV-SSFVESLADNIAGVVQYNKDNRESSNHITID-- 981
++ + +L L+ N + S V+ YN S+ +
Sbjct: 422 KESTISIPSIYLELKVKLE--NEYALHRSIVD----------HYNIPKTFDSDDLIPPYL 469
Query: 982 D----------LCALLMDKKQD---------------------PVARYAAVNDLILSKEK 1010
D L + ++ ++ + + +
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 1011 KKNPCVDY--KYEKMIEDMKN 1029
K D KYE+++ + +
Sbjct: 530 YKPYICDNDPKYERLVNAILD 550
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 36.5 bits (85), Expect = 0.001
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
Y C C + FS + L++H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 36.5 bits (85), Expect = 0.001
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
Y C C + FS + L++H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 36.1 bits (84), Expect = 0.002
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y C C + FS L H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.4 bits (82), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C C + FS L H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.0 bits (81), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.0 bits (81), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.0 bits (81), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.0 bits (81), Expect = 0.004
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.015
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.015
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.015
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.016
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.016
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 33.5 bits (77), Expect = 0.018
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 32.3 bits (74), Expect = 0.049
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQG 260
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 32.3 bits (74), Expect = 0.049
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQG 341
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 32.3 bits (74), Expect = 0.049
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQG 422
Y C C + FS + L +H+++H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.9 bits (73), Expect = 0.050
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y+C C + FS + L H+KMH
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.5 bits (72), Expect = 0.076
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQG 87
Y C C + FS N L +H + H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.5 bits (72), Expect = 0.076
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQG 141
Y C C + FS N L +H + H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 30.4 bits (69), Expect = 0.22
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y C C + FS L +H K H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 28.1 bits (63), Expect = 1.2
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQG 195
Y C C + + L +H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 36.4 bits (84), Expect = 0.002
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G +KC+ C + F+++ L H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.6 bits (82), Expect = 0.003
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 550 HKEIHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 583
G +KC C + F++++ L +H+ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.6 bits (82), Expect = 0.003
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 523 HMKQHQGIR-YKCDLCSKEFSRKDNLTEHKEIHQG 556
G +KC C + F++++ L +H+ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.2 bits (81), Expect = 0.004
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 254 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 287
G +KC C + F+++ L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.2 bits (81), Expect = 0.004
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 335 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 368
G +KC C + F+++ L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.2 bits (81), Expect = 0.004
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 416 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 449
G +KC C + F+++ L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.2 bits (81), Expect = 0.004
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 577 HKEIHQGIR-YKCDLCSKKFSRKLNLTKHMKIHQG 610
G +KC C + F+++ L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 35.2 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+KC C + F++++ L +H+ H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.8 bits (80), Expect = 0.005
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 81 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 114
G +KC C + F+ ++ L++H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.8 bits (80), Expect = 0.005
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 135 HMEQHQGIR-YKCDLCSKDFSYKSSLIEHKKLHQG 168
G +KC C + F+ ++ L++H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.8 bits (80), Expect = 0.005
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
+KC C + F+++ L H++ H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.011
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 280 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 314
G +KC C + F+++ L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.011
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 361 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 395
G +KC C + F+++ L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.011
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 442 KHMKIHQGIR-YKCDLCSKEFSRKGNLTKHMKLHQG 476
G +KC C + F+++ L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.012
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 226 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 260
G +KC C + F++++ L +H+ H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.012
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 307 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 341
G +KC C + F++++ L +H+ H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.012
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 388 KHMKLHQGIR-YKCDLCLKEFSRKDNLTEHKEIHQG 422
G +KC C + F++++ L +H+ H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 33.3 bits (76), Expect = 0.018
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G +KC+ C + F++ YL +H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 33.3 bits (76), Expect = 0.020
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 108 HKKLHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 141
G +KC+ C + F++ YL +H H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.1 bits (73), Expect = 0.049
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 189 HKKLHQGIR-YNCDLCSKEFSRKDNLTDHKKMHQG 222
G + C C + F++++ L H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 31.4 bits (71), Expect = 0.096
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
+KC C + F+ + L +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 28.7 bits (64), Expect = 0.78
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 162 HKKLHQGIR-YKCNLCSKEYFFKRNLTEHKKLHQG 195
G +KC+ C + + + L +H++ H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.4 bits (58), Expect = 5.9
Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 469 KHMKLHQGIR-YKCDLCLKEFSRKDNLTD-RKIHQG 502
G +KC C + F++++ L + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 36.1 bits (84), Expect = 0.002
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
Y C C K F+++G+L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 36.1 bits (84), Expect = 0.002
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
Y C C K F+++G+L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 36.1 bits (84), Expect = 0.002
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
Y C C K F+++G+L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 34.9 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
Y C C K F+++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 34.9 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
Y C C K F+++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 34.9 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
Y C C K F+++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 34.9 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
Y C C K F+++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 34.6 bits (80), Expect = 0.006
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 27 HKKIHQGIR-YKCNLCSKEFSRKYNLTDHKKIHQG 60
G Y C C K F+++ +L H++
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 33.8 bits (78), Expect = 0.012
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y C C K F+ +G+L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 33.0 bits (76), Expect = 0.021
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C C K F+++ +L H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 33.0 bits (76), Expect = 0.023
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 33.0 bits (76), Expect = 0.023
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 32.6 bits (75), Expect = 0.028
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 32.6 bits (75), Expect = 0.033
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
Y C C K F+ + SL H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 32.6 bits (75), Expect = 0.033
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
Y C C K F+ + SL H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 31.5 bits (72), Expect = 0.080
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQG 260
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 31.5 bits (72), Expect = 0.080
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQG 341
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 31.5 bits (72), Expect = 0.080
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQG 422
Y C C K F+++ +L H+
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 29.6 bits (67), Expect = 0.38
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y C C K F+++ +L H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 29.6 bits (67), Expect = 0.44
Identities = 8/35 (22%), Positives = 10/35 (28%), Gaps = 1/35 (2%)
Query: 54 HKKIHQGIR-YKCNLCSKEFSRNCYLTEHMEQHQG 87
G Y C C K F++ L H
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 29.2 bits (66), Expect = 0.58
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQG 141
Y C C K F++ L H
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 26.5 bits (59), Expect = 5.1
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 171 YKCNLCSKEYFFKRNLTEHKKLHQG 195
Y C C K + + +L H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 37.7 bits (88), Expect = 0.017
Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 44/151 (29%)
Query: 763 HGGPIFLMIGGEGEASAKWMVEGTWLDYAHNHNALAVQVEHRF-------YGKSHPLSDL 815
HGGP G +Y N ALA + G S L D
Sbjct: 61 HGGP------------------GMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPDA 102
Query: 816 SVESLQYLSAEQALADLAYFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVH 875
+ + + + + + T++ ++ G S+ G L A + + P +
Sbjct: 103 PAD---FWTPQLFVDEFHAVCTALG-------IERYHVLGQSWGGMLGAEIAVRQPSGLV 152
Query: 876 G----AMSASGPLRAVVDFPEYFGVVADALA 902
AS L + E G + L
Sbjct: 153 SLAICNSPASMRL-----WSEAAGDLRAQLP 178
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 34.8 bits (79), Expect = 0.018
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 254 HKEIHQGIRYKCDLCSKKFSRKLN-LTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMK 310
+ EI C C + + L KHM+ + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 34.8 bits (79), Expect = 0.018
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 335 HKEIHQGIRYKCDLCSKKFSRKLN-LTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMK 391
+ EI C C + + L KHM+ + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 34.8 bits (79), Expect = 0.018
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 416 HKEIHQGIRYKCDLCSKKFSRKLN-LTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMK 472
+ EI C C + + L KHM+ + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 31.8 bits (71), Expect = 0.24
Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 497 RKIHQGIRYKCDLCSK-EFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEH 550
+I C C + L +HM+ + + C C K+ + H
Sbjct: 27 LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 30.6 bits (68), Expect = 0.58
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 550 HKEIHQGIRYKCDLCSKEFSRK--DNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMK 606
+ EI C C RK + L +H E + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTCQ-AVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 29.8 bits (66), Expect = 1.2
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 281 HMKIHQGIRYKCDLCSKEFSRK--GNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 335
+++I C C RK L KHM+ + + C C K+ + H
Sbjct: 26 YLEIVDKGSVSCPTCQ-AVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 29.8 bits (66), Expect = 1.2
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 362 HMKIHQGIRYKCDLCSKEFSRK--GNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEH 416
+++I C C RK L KHM+ + + C C K+ + H
Sbjct: 26 YLEIVDKGSVSCPTCQ-AVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 29.8 bits (66), Expect = 1.2
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 577 HKEIHQGIRYKCDLCSKKFSRKLN-LTKHMKIHQGIRYKCDLCSKEFSRK 625
+ EI C C + + L KHM+ + + C C K+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSL 75
Score = 28.7 bits (63), Expect = 3.1
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 54 HKKIHQGIRYKCNLCSKEFSRNCY-LTEHMEQHQGIRYKCDLCSKDFSYKSSLIEH 108
+ +I C C + L +HME + + C C K + + H
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 28.3 bits (62), Expect = 4.7
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 227 HMKLHQGIRYKCDLCLKEFSRK--DNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMK 283
++++ C C + RK + L +H E + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTC-QAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 28.3 bits (62), Expect = 4.7
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 308 HMKLHQGIRYKCDLCLKEFSRK--DNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMK 364
++++ C C + RK + L +H E + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTC-QAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 28.3 bits (62), Expect = 4.7
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 389 HMKLHQGIRYKCDLCLKEFSRK--DNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMK 445
++++ C C + RK + L +H E + + C C K+ + H+
Sbjct: 26 YLEIVDKGSVSCPTC-QAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 27.9 bits (61), Expect = 5.6
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 108 HKKLHQGIRYKCNLCSKEFSRNCY-LTEHMEQHQGIRYKCDLCSKDFSYKSSLIEH 162
+ ++ C C + L +HME + + C C K + + H
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYH 81
Score = 27.9 bits (61), Expect = 6.1
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 443 HMKIHQGIRYKCDLCSKEFSRK--GNLTKHMKLHQGIRYKCDLCLKEFSRKDNL 494
+++I C C RK L KHM+ + + C C K+ +
Sbjct: 26 YLEIVDKGSVSCPTCQ-AVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGM 78
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 37.7 bits (87), Expect = 0.024
Identities = 30/221 (13%), Positives = 63/221 (28%), Gaps = 37/221 (16%)
Query: 146 CDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSK 205
C C DF + QG ++C +C + HK+ H+ + ++C K
Sbjct: 51 CSHC-TDFIWGFG-------KQG--FQCQVC--------SFVVHKRCHEFVTFSCPGADK 92
Query: 206 EFSRKDNLTDHKKMHQGNLTKHMKLHQGIR--------YKCDLCLKEFSRKDNLTEHKEI 257
+ D + HK + H G KCD C + HK
Sbjct: 93 GPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTC--------MMNVHKRC 144
Query: 258 HQGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQGIRY 317
+ C + ++ + H+ + + + + ++
Sbjct: 145 VMNVPSLCGTDHTERRGRIYIQAHIDRE---VLIVVVRDAKNLVPMDPNGLSDPYVKLKL 201
Query: 318 KCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLN 358
D + + + ++ L R+L+
Sbjct: 202 IPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLS 242
Score = 35.4 bits (81), Expect = 0.12
Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 27/207 (13%)
Query: 8 GYKCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNL 67
G++C +C + HK+ H+ + + C K + + HK
Sbjct: 65 GFQCQVC--------SFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIH------TY 110
Query: 68 CSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEFS 127
S F +C + HQG KCD C + HK+ + C E
Sbjct: 111 SSPTFCDHCGSLLYGLIHQG--MKCDTCMMNV--------HKRCVMNVPSLCGTDHTERR 160
Query: 128 RNCYL---TEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKR 184
Y+ + +R +L D + S KL + + +K
Sbjct: 161 GRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSL 220
Query: 185 NLTEHKKLHQGIRYNCDLCSKEFSRKD 211
N ++ ++ + D
Sbjct: 221 NPEWNETFRFQLKESDKDRRLSVEIWD 247
Score = 29.6 bits (66), Expect = 7.0
Identities = 34/260 (13%), Positives = 64/260 (24%), Gaps = 42/260 (16%)
Query: 488 FSRKDNLTDRKIHQ-----------GIRYKCDLCSKEFSSKGNLTEHMKQHQGIRYKCDL 536
F+RK L + +H+ C C +F QG ++C +
Sbjct: 21 FARKGALRQKNVHEVKNHKFTARFFKQPTFCSHC-TDFIWGFG-------KQG--FQCQV 70
Query: 537 CSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYK--CDLCS-- 592
C + HK H+ + + C K + D ++HK CD C
Sbjct: 71 C--------SFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSL 122
Query: 593 ----KKFSRK---LNLTKHMKIHQGIRYKCDLCSKEFSRKDIPYEVTVKEESYEGDSINV 645
K + H + + C E + +E
Sbjct: 123 LYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAK 182
Query: 646 EENNGNDAVTRDCLEFFKTEQNTTLGKLNKILHQDIRYKCDLCSKDFSRKDNLTEHKEIH 705
+ D K + K + K+
Sbjct: 183 NLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRF--QLKESDKDRR 240
Query: 706 QGIRVSDINHGTLGEPSGVM 725
+ + D + + + G +
Sbjct: 241 LSVEIWDWDLTSRNDFMGSL 260
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 262 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 289
++ C C K+F R +L+KH+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 343 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 370
++ C C K+F R +L+KH+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 424 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 451
++ C C K+F R +L+KH+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 33.0 bits (75), Expect = 0.024
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 585 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 612
++ C C K+F R +L+KH+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 31.8 bits (72), Expect = 0.051
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 316
++ C C K F R +L+KH+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 31.8 bits (72), Expect = 0.051
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 397
++ C C K F R +L+KH+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 31.8 bits (72), Expect = 0.051
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 478
++ C C K F R +L+KH+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 30.7 bits (69), Expect = 0.14
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 531 RYKCDLCSKEFSRKDNLTEHKEIHQGIR 558
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 30.7 bits (69), Expect = 0.14
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIHQGIR 585
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 30.7 bits (69), Expect = 0.15
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 197 RYNCDLCSKEFSRKDNLTDHKKMHQG 222
++ C C K F R D+L+ H +H+
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHEL 27
Score = 30.3 bits (68), Expect = 0.21
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIHQGIR 709
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 29.5 bits (66), Expect = 0.36
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 235 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 262
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 29.5 bits (66), Expect = 0.36
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 316 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 343
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 29.5 bits (66), Expect = 0.36
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 424
++ C C K F R D+L++H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 29.1 bits (65), Expect = 0.55
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 35 RYKCNLCSKEFSRKYNLTDHKKIHQGIR 62
++ C C K F R +L+ H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 28.0 bits (62), Expect = 1.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 62 RYKCNLCSKEFSRNCYLTEHMEQHQGIR 89
++ C C K F R+ +L++H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 28.0 bits (62), Expect = 1.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 116 RYKCNLCSKEFSRNCYLTEHMEQHQGIR 143
++ C C K F R+ +L++H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 26.8 bits (59), Expect = 2.9
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQHQGIR 531
++ C C K F +L++H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLG 29
Score = 26.4 bits (58), Expect = 3.8
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR 35
+ C C K F R +L+ H +H+ +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLG 29
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 34.4 bits (78), Expect = 0.031
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 514 FSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNL-----TEHKEIHQGIRYKCDLCSKEF 568
+ + K+ +G Y+C C+ + + +EH + Y C C+
Sbjct: 2 AHHHHHHNQQNKKVEG-GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 569 SRKDNLTEH-KEIHQG 583
R D L+EH + H G
Sbjct: 61 KRYDALSEHNLKYHPG 76
Score = 32.8 bits (74), Expect = 0.11
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Query: 8 GYKCDLCSKEFSRKYNLTDH-KKIHQGIR----YKCNLCSKEFSRKYNLTDH-KKIHQG 60
GY+C C+ + T H H + Y C C+ R L++H K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 32.4 bits (73), Expect = 0.18
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 424 RYKCDLCSKKFSRKLNLTKHM-KIHQGIR----YKCDLCSKEFSRKGNLTKH-MKLHQG 476
Y+C C+ + T H+ H + Y C C+ R L++H +K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 32.1 bits (72), Expect = 0.19
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 558 RYKCDLCSKEFSRKDNL-----TEHKEIHQGIRYKCDLCSKKFSRKLNLTKH-MKIHQG 610
Y+C C+ + + +EH + Y C C+ R L++H +K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 30.9 bits (69), Expect = 0.47
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 23/81 (28%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDL 348
Y+C C+ + T H+ +EH + Y C
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVD----------------------SEHPNVVLNSSYVCVE 55
Query: 349 CSKKFSRKLNLTKH-MKIHQG 368
C+ R L++H +K H G
Sbjct: 56 CNFLTKRYDALSEHNLKYHPG 76
Score = 30.9 bits (69), Expect = 0.47
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 23/81 (28%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDL 429
Y+C C+ + T H+ +EH + Y C
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVD----------------------SEHPNVVLNSSYVCVE 55
Query: 430 CSKKFSRKLNLTKH-MKIHQG 449
C+ R L++H +K H G
Sbjct: 56 CNFLTKRYDALSEHNLKYHPG 76
Score = 30.9 bits (69), Expect = 0.56
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 170 RYKCNLCS-----KEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTDH-KKMHQGN 223
Y+C C+ F +EH + Y C C+ R D L++H K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77
Query: 224 LTKHMKL 230
+ +
Sbjct: 78 ENFKLTM 84
Score = 30.5 bits (68), Expect = 0.66
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 53 DHKKIHQGIRYKCNLCSKEFSRNCYLTEHME-QHQGIR----YKCDLCSKDFSYKSSLIE 107
+ + Y+C C+ + T H++ +H + Y C C+ +L E
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 108 H-KKLHQG 114
H K H G
Sbjct: 69 HNLKYHPG 76
Score = 30.5 bits (68), Expect = 0.71
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 26 DHKKIHQGIRYKCNLCSKEFSRKYNLTDH-KKIHQGIR----YKCNLCSKEFSRNCYLTE 80
+ + Y+C C+ + T H H + Y C C+ R L+E
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 81 H-MEQHQG 87
H ++ H G
Sbjct: 69 HNLKYHPG 76
Score = 30.5 bits (68), Expect = 0.71
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 220 HQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNL-----TEHKEIHQGIRYKCDLCSKKFSR 274
H + Y+C C + + +EH + Y C C+ R
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 275 KLNLTKH-MKIHQG 287
L++H +K H G
Sbjct: 63 YDALSEHNLKYHPG 76
Score = 30.5 bits (68), Expect = 0.80
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 116 RYKCNLCSKEFSRNCYLTEHME-QHQGIR----YKCDLCSKDFSYKSSLIEH-KKLHQG 168
Y+C C+ + T H++ +H + Y C C+ +L EH K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 30.1 bits (67), Expect = 1.0
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 6/59 (10%)
Query: 89 RYKCDLCSKDFSYKSSLIEH-KKLHQGIR----YKCNLCSKEFSRNCYLTEH-MEQHQG 141
Y+C C+ + H H + Y C C+ R L+EH ++ H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 32.2 bits (74), Expect = 0.038
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 532 YKCD--LCSKEFSRKDNLTEHKEIHQGIR 558
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 32.2 bits (74), Expect = 0.038
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 559 YKCD--LCSKEFSRKDNLTEHKEIHQGIR 585
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.8 bits (73), Expect = 0.054
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 683 YKCD--LCSKDFSRKDNLTEHKEIHQGIR 709
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.061
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 263 YKCD--LCSKKFSRKLNLTKHMKIHQGIR 289
+ C C K+F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.061
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 344 YKCD--LCSKKFSRKLNLTKHMKIHQGIR 370
+ C C K+F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.061
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 425 YKCD--LCSKKFSRKLNLTKHMKIHQGIR 451
+ C C K+F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.061
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 586 YKCD--LCSKKFSRKLNLTKHMKIHQGIR 612
+ C C K+F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.7 bits (70), Expect = 0.12
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 236 YKCD--LCLKEFSRKDNLTEHKEIHQGIR 262
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.7 bits (70), Expect = 0.12
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 317 YKCD--LCLKEFSRKDNLTEHKEIHQGIR 343
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.7 bits (70), Expect = 0.12
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 398 YKCD--LCLKEFSRKDNLTEHKEIHQGIR 424
+ C C K F+R D L HK H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.20
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 290 YKCD--LCSKEFSRKGNLTKHMKLHQGIR 316
+ C C K F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.20
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 371 YKCD--LCSKEFSRKGNLTKHMKLHQGIR 397
+ C C K F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.20
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 452 YKCD--LCSKEFSRKGNLTKHMKLHQGIR 478
+ C C K F+R L +H + H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.24
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 36 YKCN--LCSKEFSRKYNLTDHKKIHQGIR 62
+ C C K F+R L HK+ H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.5 bits (67), Expect = 0.37
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 9 YKCD--LCSKEFSRKYNLTDHKKIHQGIR 35
+ C C K F+R L HK+ H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 28.7 bits (65), Expect = 0.55
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 198 YNCD--LCSKEFSRKDNLTDHKKMHQG 222
+ C C K F+R D L HK+ H G
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 25.3 bits (56), Expect = 9.9
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 63 YKCN--LCSKEFSRNCYLTEHMEQHQGIR 89
+ C C K F+R+ L H H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.3 bits (56), Expect = 9.9
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 117 YKCN--LCSKEFSRNCYLTEHMEQHQGIR 143
+ C C K F+R+ L H H G +
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 32.2 bits (72), Expect = 0.046
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQGNLTK 226
Y+C +C F RKD ++ H + H G++ K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 31.8 bits (71), Expect = 0.078
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQGIRYKCD 562
Y C +C F RKD ++ H H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.8 bits (71), Expect = 0.078
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQGIRYKCD 589
Y C +C F RKD ++ H H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.4 bits (70), Expect = 0.11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCD 293
Y C +C +F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.4 bits (70), Expect = 0.11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCD 374
Y C +C +F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.4 bits (70), Expect = 0.11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCD 455
Y C +C +F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.4 bits (70), Expect = 0.11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQGIRYKCD 616
Y C +C +F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.0 bits (69), Expect = 0.15
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
Y C +C F RKD ++ H H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 31.0 bits (69), Expect = 0.16
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCD 266
Y C +C F RKD ++ H H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.0 bits (69), Expect = 0.16
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCD 347
Y C +C F RKD ++ H H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 31.0 bits (69), Expect = 0.16
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQGIRYKCD 428
Y C +C F RKD ++ H H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 30.7 bits (68), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCD 320
Y C +C F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 30.7 bits (68), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCD 401
Y C +C F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 30.7 bits (68), Expect = 0.19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQGIRYKCD 482
Y C +C F RK ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 29.9 bits (66), Expect = 0.35
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y C +C F RK ++ H + H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 29.1 bits (64), Expect = 0.64
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C +C F RK ++ H + H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 28.3 bits (62), Expect = 1.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQGIRYKCD 535
Y C +C F K ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 28.0 bits (61), Expect = 1.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 63 YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCD 93
Y C +C F R ++ H+ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 28.0 bits (61), Expect = 1.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 117 YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCD 147
Y C +C F R ++ H+ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 36.0 bits (83), Expect = 0.049
Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 20/125 (16%)
Query: 785 GTWLDYAHNHNALA------VQVEHRFYGKSHPLSDLSVESLQ--YLSAEQALADLAYFI 836
G+ D AL +G PL L+ + + + A+A +
Sbjct: 33 GSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAVAHMT--- 89
Query: 837 TSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASGPLRAVVDFPEYFGV 896
+ K FG S G A P + G + +S L F
Sbjct: 90 ---------AKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLK 140
Query: 897 VADAL 901
A+ +
Sbjct: 141 YAEYM 145
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 31.8 bits (72), Expect = 0.055
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 262 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 289
++ C C K+F R +LT H+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.8 bits (72), Expect = 0.055
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 343 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 370
++ C C K+F R +LT H+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.8 bits (72), Expect = 0.055
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 424 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 451
++ C C K+F R +LT H+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.8 bits (72), Expect = 0.055
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 585 RYKCDLCSKKFSRKLNLTKHMKIHQGIR 612
++ C C K+F R +LT H+ +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.0 bits (70), Expect = 0.098
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 316
++ C C K F R +LT H+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.0 bits (70), Expect = 0.098
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 397
++ C C K F R +LT H+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 31.0 bits (70), Expect = 0.098
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLHQGIR 478
++ C C K F R +LT H+ LH+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 30.2 bits (68), Expect = 0.18
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 197 RYNCDLCSKEFSRKDNLTDHKKMHQGN 223
++ C C K F R D+LT H +H+
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENK 28
Score = 29.5 bits (66), Expect = 0.31
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 531 RYKCDLCSKEFSRKDNLTEHKEIHQGIR 558
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 29.5 bits (66), Expect = 0.31
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIHQGIR 585
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 29.1 bits (65), Expect = 0.46
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIHQGIR 709
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.3 bits (63), Expect = 0.73
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 235 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 262
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.3 bits (63), Expect = 0.73
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 316 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 343
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.3 bits (63), Expect = 0.73
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIHQGIR 424
++ C C K F R D+LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.9 bits (62), Expect = 1.4
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 35 RYKCNLCSKEFSRKYNLTDHKKIHQGIR 62
++ C C K F R +LT H +H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.2 bits (60), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 62 RYKCNLCSKEFSRNCYLTEHMEQHQGIR 89
++ C C K F R+ +LT H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.2 bits (60), Expect = 2.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 116 RYKCNLCSKEFSRNCYLTEHMEQHQGIR 143
++ C C K F R+ +LT H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.0 bits (57), Expect = 5.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQHQGIR 531
++ C C K F +LT H+ H+ +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 25.6 bits (56), Expect = 8.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQGIR 35
+ C C K F R +LT H +H+ +
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 32.3 bits (73), Expect = 0.11
Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 7/67 (10%)
Query: 522 EHMKQHQGI-----RYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTE 576
H+ C C E S L EH++ C C + KD L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHEDYCGARTELCGNCGRNVLVKD-LKT 60
Query: 577 HKEIHQG 583
H E+
Sbjct: 61 HPEVCGR 67
Score = 31.5 bits (71), Expect = 0.21
Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Query: 545 DNLTEHKEIH-QGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTK 603
+ H+E C C E S L EH++ C C + K +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSILK-LKEHEDYCGARTELCGNCGRNVLVK-DLKT 60
Query: 604 HMKIHQG 610
H ++
Sbjct: 61 HPEVCGR 67
Score = 30.7 bits (69), Expect = 0.41
Identities = 14/51 (27%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 506 KCDLCSKEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSRKDNLTEHKEIHQG 556
C C E S L EH C C + KD L H E+
Sbjct: 19 VCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGR 67
Score = 30.0 bits (67), Expect = 0.72
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 237 KCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQG 287
C C E S L EH++ C C + K +L H ++
Sbjct: 19 VCQHCDLELSILK-LKEHEDYCGARTELCGNCGRNVLVK-DLKTHPEVCGR 67
Score = 30.0 bits (67), Expect = 0.72
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 318 KCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQG 368
C C E S L EH++ C C + K +L H ++
Sbjct: 19 VCQHCDLELSILK-LKEHEDYCGARTELCGNCGRNVLVK-DLKTHPEVCGR 67
Score = 30.0 bits (67), Expect = 0.72
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 399 KCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKLNLTKHMKIHQG 449
C C E S L EH++ C C + K +L H ++
Sbjct: 19 VCQHCDLELSILK-LKEHEDYCGARTELCGNCGRNVLVK-DLKTHPEVCGR 67
Score = 28.8 bits (64), Expect = 1.9
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 10 KCDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQG 60
C C E S L +H+ C C + K +L H ++
Sbjct: 19 VCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVK-DLKTHPEVCGR 67
Score = 28.8 bits (64), Expect = 1.9
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 172 KCNLCSKEYFFKRNLTEHKKLHQGIRYNCDLCSKEFSRKDNLTDHKKMHQG 222
C C E L EH+ C C + KD L H ++
Sbjct: 19 VCQHCDLELSI-LKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGR 67
Score = 28.0 bits (62), Expect = 3.0
Identities = 13/51 (25%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 291 KCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQG 341
C C E S L +H C C + KD L H E+
Sbjct: 19 VCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGR 67
Score = 28.0 bits (62), Expect = 3.0
Identities = 13/51 (25%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 372 KCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKEIHQG 422
C C E S L +H C C + KD L H E+
Sbjct: 19 VCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGR 67
Score = 26.9 bits (59), Expect = 7.3
Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 249 DNLTEHKEIH-QGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTK 307
+ H+E C C + S L +H C C + K +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVK-DLKT 60
Query: 308 HMKLHQG 314
H ++
Sbjct: 61 HPEVCGR 67
Score = 26.9 bits (59), Expect = 7.3
Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 330 DNLTEHKEIH-QGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTK 388
+ H+E C C + S L +H C C + K +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVK-DLKT 60
Query: 389 HMKLHQG 395
H ++
Sbjct: 61 HPEVCGR 67
Score = 26.9 bits (59), Expect = 7.3
Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 3/67 (4%)
Query: 411 DNLTEHKEIH-QGIRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTK 469
+ H+E C C + S L +H C C + K +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELSIL-KLKEHEDYCGARTELCGNCGRNVLVK-DLKT 60
Query: 470 HMKLHQG 476
H ++
Sbjct: 61 HPEVCGR 67
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088,
agrobacterium tumefaciens STR. C58 structural genomics,
PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP:
c.69.1.14
Length = 251
Score = 34.5 bits (79), Expect = 0.12
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 824 SAEQALADLAYFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASG 882
E+A +A FI + Y I G S + A + + P L A+
Sbjct: 119 DLERATGKMADFIKANREHYQAG---PVIGLGFSNGANILANVLIEQPELFDAAVLMHP 174
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 30.6 bits (69), Expect = 0.12
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 198 YNCDLCSKEFSRKDNLTDH-KKMHQGNL 224
Y C LC++ F+R+D L H +K+H GNL
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSGNL 30
Score = 27.1 bits (60), Expect = 2.6
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 683 YKCDLCSKDFSRKDNLTEH-KEIHQG 707
Y C LC++ F+R+D L H ++IH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.7 bits (59), Expect = 2.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 532 YKCDLCSKEFSRKDNLTEH-KEIHQG 556
Y C LC++ F+R+D L H ++IH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.7 bits (59), Expect = 2.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 559 YKCDLCSKEFSRKDNLTEH-KEIHQG 583
Y C LC++ F+R+D L H ++IH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.4 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 290 YKCDLCSKEFSRKGNLTKHM-KLHQG 314
Y C LC++ F+R+ L +H K+H G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.4 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 371 YKCDLCSKEFSRKGNLTKHM-KLHQG 395
Y C LC++ F+R+ L +H K+H G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.4 bits (58), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 452 YKCDLCSKEFSRKGNLTKHM-KLHQG 476
Y C LC++ F+R+ L +H K+H G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.0 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 263 YKCDLCSKKFSRKLNLTKHM-KIHQG 287
Y C LC++ F+R+ L +H KIH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.0 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 344 YKCDLCSKKFSRKLNLTKHM-KIHQG 368
Y C LC++ F+R+ L +H KIH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.0 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 425 YKCDLCSKKFSRKLNLTKHM-KIHQG 449
Y C LC++ F+R+ L +H KIH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.0 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 586 YKCDLCSKKFSRKLNLTKHM-KIHQG 610
Y C LC++ F+R+ L +H KIH G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 34.7 bits (80), Expect = 0.13
Identities = 19/152 (12%), Positives = 41/152 (26%), Gaps = 34/152 (22%)
Query: 763 HGGPIFLMIGGEGEASAKWMVEGTWLDYAHNHNALAVQVEHRFYGKSHPLSDLSVESLQY 822
HGGP G + DY V + R G+S L + +
Sbjct: 32 HGGP--------GGNAYVLR--EGLQDYLEGFRV--VYFDQRGSGRSLELP----QDPRL 75
Query: 823 LSAEQALADLAYFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVHGAMSASG 882
+ + + D ++ ++ + +A + ++P + A
Sbjct: 76 FTVDALVEDTLLLAEALG-------VERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPW 128
Query: 883 PLR-----------AVVDFPEYFGVVADALAT 903
+ P+ + +AL
Sbjct: 129 VNFPWLAARLAEAAGLAPLPDPEENLKEALKR 160
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 34.8 bits (79), Expect = 0.17
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 498 KIHQGIRYKCDLCSKEFSSKGNLTEHMKQHQGIRYKCDLCSKEFSR 543
I Y C++C+ FS+ L+EH++ L + +
Sbjct: 110 PIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 33.3 bits (75), Expect = 0.32
Identities = 18/146 (12%), Positives = 47/146 (32%), Gaps = 12/146 (8%)
Query: 55 KKIHQGIR---YKCNLCSKEFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKKL 111
+ I +G Y+ + +++ S + ++++ + D + + + +
Sbjct: 91 EVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKS-IDGSDETKANWMRYVVISRE 149
Query: 112 HQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIR---YKCDLCSKDFSYKSSLIEHKKLHQG 168
+ + NL + + S Y + G + + K S H+ L +G
Sbjct: 150 ER----EQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARG 205
Query: 169 I-RYKCNLCSKEYFFKRNLTEHKKLH 193
R + + +L L
Sbjct: 206 EKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 29.0 bits (64), Expect = 6.2
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 265 CDLCSKKFSRKLNLTKHMKIHQGI-RYKCDLCSKEFSRKGNLTKHMKLH 312
+ K+ T H + +G R + + + +L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 29.0 bits (64), Expect = 6.2
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 346 CDLCSKKFSRKLNLTKHMKIHQGI-RYKCDLCSKEFSRKGNLTKHMKLH 393
+ K+ T H + +G R + + + +L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 29.0 bits (64), Expect = 6.2
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 427 CDLCSKKFSRKLNLTKHMKIHQGI-RYKCDLCSKEFSRKGNLTKHMKLH 474
+ K+ T H + +G R + + + +L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.6 bits (63), Expect = 8.7
Identities = 6/49 (12%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 561 CDLCSKEFSRKDNLTEHKEIHQGI-RYKCDLCSKKFSRKLNLTKHMKIH 608
+ K T H+ + +G R + + + +L + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 31.5 bits (70), Expect = 0.35
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 254 HKEIHQGIRYKCDLCSKKFSRKL-NLTKHMKIHQGIR--YKCDLCSKEFSRKGNLTKHMK 310
+ IH+ C C+ + L L KHM++ Q ++ KC C K+F K L H
Sbjct: 16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 31.5 bits (70), Expect = 0.35
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 335 HKEIHQGIRYKCDLCSKKFSRKL-NLTKHMKIHQGIR--YKCDLCSKEFSRKGNLTKHMK 391
+ IH+ C C+ + L L KHM++ Q ++ KC C K+F K L H
Sbjct: 16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 31.5 bits (70), Expect = 0.35
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 416 HKEIHQGIRYKCDLCSKKFSRKL-NLTKHMKIHQGIR--YKCDLCSKEFSRKGNLTKHMK 472
+ IH+ C C+ + L L KHM++ Q ++ KC C K+F K L H
Sbjct: 16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 27.6 bits (60), Expect = 8.5
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 550 HKEIHQGIRYKCDLCSKEFSRK--DNLTEHKEIHQGIR--YKCDLCSKKFSRKLNLTKHM 605
+ IH+ C C +RK L +H E+ Q ++ KC C K+F K L H
Sbjct: 16 QRAIHERGEAVCPTC-NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74
Query: 606 K 606
Sbjct: 75 M 75
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 33.1 bits (76), Expect = 0.41
Identities = 18/165 (10%), Positives = 30/165 (18%), Gaps = 50/165 (30%)
Query: 750 WKQRYF-VN--STWYK-----------HGGPIFLMIGGEGEASAKWMVEGTWLDYAHNHN 795
W Y H + N
Sbjct: 3 WTTNIIKTPRGKFEYFLKGEGPPLCVTHLYS------------------EYNDNGNTFAN 44
Query: 796 ALA-----VQVEHRFYGKSHPLSDLSVESLQYLSAEQALADLAYFITSMNTLYSLPAHTK 850
V + G S + S S+ DL ++ K
Sbjct: 45 PFTDHYSVYLVNLKGCGNSDSAKNDSEYSMTETIK-----DLEAIREALY-------INK 92
Query: 851 WIAFGGSYPGALAAWLRYKYPHLVHG-AMSASGPLRAVVDFPEYF 894
W G S G LA + + + + + +
Sbjct: 93 WGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSI 137
>3fdh_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2; HET:
PG4; 1.75A {Bacteroides thetaiotaomicron vpi-5482}
Length = 499
Score = 33.3 bits (75), Expect = 0.50
Identities = 24/156 (15%), Positives = 40/156 (25%), Gaps = 27/156 (17%)
Query: 751 KQRYFVNSTWYKHGGPIFLMIGGEGE---ASAKWMVEGTWLDYAHNHNALAVQVEHRFYG 807
+Y +++ Y P LM E A A + D AV
Sbjct: 314 TSKYGISAFVYAKTAPTLLMSYHELMFLKAEALCRLNRDAEDALKE----AVVAGLLNAE 369
Query: 808 KSHPLSDLSVESLQYLSAEQALADLAYFITSMNTLYSLPAHT----------KWIAFGGS 857
S +S E L+ + + K++A G+
Sbjct: 370 NS--ISIAIKELGSGLNTNSSEVITETSAGKYFDDVVKAKYAANPLQETMIQKYLAMWGA 427
Query: 858 YPGALAAW---LRYKYPHLVHGAMSASG-----PLR 885
A + R K + ++ PLR
Sbjct: 428 SGEATETYNDFRRMKGLNENFITLTNPNNSSKFPLR 463
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 29.0 bits (64), Expect = 0.54
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
Y C C ++F+ G L +H+++H G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 29.0 bits (64), Expect = 0.54
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
Y C C ++F+ G L +H+++H G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 29.0 bits (64), Expect = 0.54
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
Y C C ++F+ G L +H+++H G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
Y C C ++F+ L +H++IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
Y C C ++F+ L +H++IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
Y C C ++F+ L +H++IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
Y C C ++F+ L +H++IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.0 bits (59), Expect = 2.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQG 529
Y C C ++F+ G L H++ H G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 25.5 bits (55), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
Y C C ++F+ L H IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 25.5 bits (55), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
Y C C ++F+ L H IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
Score = 25.5 bits (55), Expect = 8.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y C C ++F+ L H +IH G
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTG 28
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.0 bits (64), Expect = 0.54
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 286 QGIRYKCDLCSKEFSRKGNLTKHMKLHQG 314
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 29.0 bits (64), Expect = 0.54
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 367 QGIRYKCDLCSKEFSRKGNLTKHMKLHQG 395
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 29.0 bits (64), Expect = 0.54
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 448 QGIRYKCDLCSKEFSRKGNLTKHMKLHQG 476
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 28.6 bits (63), Expect = 0.73
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 501 QGIRYKCDLCSKEFSSKGNLTEHMKQHQG 529
G YKC CS + K NL H+++H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 27.9 bits (61), Expect = 1.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 259 QGIRYKCDLCSKKFSRKLNLTKHMKIHQG 287
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 27.9 bits (61), Expect = 1.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 340 QGIRYKCDLCSKKFSRKLNLTKHMKIHQG 368
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 27.9 bits (61), Expect = 1.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 421 QGIRYKCDLCSKKFSRKLNLTKHMKIHQG 449
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 27.9 bits (61), Expect = 1.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 582 QGIRYKCDLCSKKFSRKLNLTKHMKIHQG 610
G YKC CS + K NL H++ H G
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTG 34
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.4 bits (65), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 62 RYKCNLCSKEFSRNCYLTEHMEQH 85
+KCN C K FS + YLT+H H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 29.4 bits (65), Expect = 0.57
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 116 RYKCNLCSKEFSRNCYLTEHMEQH 139
+KCN C K FS + YLT+H H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.6 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 262 RYKCDLCSKKFSRKLNLTKHMKIH 285
+KC+ C K FS LT+H +IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.6 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 343 RYKCDLCSKKFSRKLNLTKHMKIH 366
+KC+ C K FS LT+H +IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.6 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 424 RYKCDLCSKKFSRKLNLTKHMKIH 447
+KC+ C K FS LT+H +IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.6 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 585 RYKCDLCSKKFSRKLNLTKHMKIH 608
+KC+ C K FS LT+H +IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 531 RYKCDLCSKEFSRKDNLTEHKEIH 554
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 1.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIH 581
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 682 RYKCDLCSKDFSRKDNLTEHKEIH 705
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 35 RYKCNLCSKEFSRKYNLTDHKKIH 58
+KCN C K FS LT H++IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.9 bits (61), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLH 312
+KC+ C K FS LT+H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.9 bits (61), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 370 RYKCDLCSKEFSRKGNLTKHMKLH 393
+KC+ C K FS LT+H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.9 bits (61), Expect = 1.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLH 474
+KC+ C K FS LT+H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.5 bits (60), Expect = 2.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIH 31
+KC+ C K FS LT H++IH
Sbjct: 13 FKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.5 bits (60), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 235 RYKCDLCLKEFSRKDNLTEHKEIH 258
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.5 bits (60), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 316 RYKCDLCLKEFSRKDNLTEHKEIH 339
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.5 bits (60), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIH 420
+KC+ C K FS LT+H+ IH
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.7 bits (58), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 89 RYKCDLCSKDFSYKSSLIEHKKLH 112
+KC+ C K FS L +H+++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.7 bits (58), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 143 RYKCDLCSKDFSYKSSLIEHKKLH 166
+KC+ C K FS L +H+++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.3 bits (57), Expect = 5.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQH 527
+KC+ C K FS LT+H + H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 28.4 bits (64), Expect = 0.70
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.70
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.70
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.70
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.73
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.73
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.73
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
+ C++C++ F+R+ +L +H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.85
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
+ C++C++ F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.85
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
+ C++C++ F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.1 bits (63), Expect = 1.1
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQG 707
+ C++C++ F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 27.3 bits (61), Expect = 1.9
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
+ C++C++ F+R+++L H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 26.9 bits (60), Expect = 3.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
+ C++C++ F+R+ +L H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 26.9 bits (60), Expect = 3.0
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQG 260
+ C++C + F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 26.9 bits (60), Expect = 3.0
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQG 341
+ C++C + F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 26.9 bits (60), Expect = 3.0
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQG 422
+ C++C + F+R+++L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 26.5 bits (59), Expect = 3.8
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
+ C +C++ F+R+ +L H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
>3cgh_A SUSD homolog; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2; 1.70A
{Bacteroides thetaiotaomicron vpi-5482} SCOP: a.118.8.6
Length = 516
Score = 32.5 bits (73), Expect = 0.76
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 23/171 (13%)
Query: 741 HFNIEEPRTWKQRYFVNSTWYKHGGPIFLM-------IGGEGEASAKWMVEGTWLDYAHN 793
I P + + P++ M + EG+A + + GT A +
Sbjct: 310 RRGIVIPELKTTGHKYSGVNIAPTSPLYWMNAAEVAFLRAEGQAVFNFSMGGT----AES 365
Query: 794 HNALAVQVEHRFYGKSHPLSDLSVESLQYLSAEQALADLAY--FITSMNTLYSLPAHT-- 849
+++ +G L + + + Y ++++ ++ A
Sbjct: 366 FYNQGIRLSFEQWGADGVEDYLKDDVNKPTAYTDPAGTNTYQNALSNITIKWNDSADKEE 425
Query: 850 --------KWIAFGGSYPGALAAWLRYKYPHLVHGAMSASGPLRAVVDFPE 892
KWIA A A + R YP L+ + SG +
Sbjct: 426 KQERIIVQKWIANWQLGNEAWADFRRTGYPKLIPVKENKSGGVVDSEKGAR 476
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex,
oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus
horikoshii}
Length = 382
Score = 32.1 bits (74), Expect = 0.85
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 754 YFVNSTWYKHGGPIFLMIGGEGEASAKWMVEG 785
Y++ + + HG F+M GE A+ + +G
Sbjct: 327 YYIAAGFSGHG---FMMAPAVGEMVAELITKG 355
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Length = 108
Score = 30.4 bits (68), Expect = 0.91
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Query: 898 ADALATVSTECVKAVQTATHTISKMLKSPSDAKYLTEQFKLCTPLDINNAKDVSSFVESL 957
A+A VS EC V I +L S + Q LC + A+ VSS ++++
Sbjct: 1 GSAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFV---DGAQHVSSNIKTV 57
Query: 958 ADNIAGVVQYNKD 970
+ +
Sbjct: 58 VERETEGSSVGEA 70
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium
janthinellum} PDB: 2xf2_A*
Length = 688
Score = 32.2 bits (73), Expect = 0.96
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 706 QGIRVSDINHGTLGEPSGVMFEKLPSDQWFEQKLDHFNIE 745
G + D N + G+ + + D F +K+ F+ E
Sbjct: 20 VGGPIQDENSLSAGQRGATLLQ----DFIFREKIQRFDHE 55
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 28.7 bits (63), Expect = 1.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 91 KCDLCSKDFSYKSSLIEHKKLHQG 114
+C C K F + S LIEH+ LH G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 28.7 bits (63), Expect = 1.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 145 KCDLCSKDFSYKSSLIEHKKLHQG 168
+C C K F + S LIEH+ LH G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.9 bits (61), Expect = 2.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 264 KCDLCSKKFSRKLNLTKHMKIHQG 287
+C C K F L +H +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.9 bits (61), Expect = 2.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 345 KCDLCSKKFSRKLNLTKHMKIHQG 368
+C C K F L +H +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.9 bits (61), Expect = 2.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 426 KCDLCSKKFSRKLNLTKHMKIHQG 449
+C C K F L +H +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.9 bits (61), Expect = 2.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 587 KCDLCSKKFSRKLNLTKHMKIHQG 610
+C C K F L +H +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.6 bits (60), Expect = 2.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 533 KCDLCSKEFSRKDNLTEHKEIHQG 556
+C C K F L EH+ +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.6 bits (60), Expect = 2.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 560 KCDLCSKEFSRKDNLTEHKEIHQG 583
+C C K F L EH+ +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
Score = 27.2 bits (59), Expect = 3.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 684 KCDLCSKDFSRKDNLTEHKEIHQG 707
+C C K F L EH+ +H G
Sbjct: 14 ECQECGKIFRHSSLLIEHQALHAG 37
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 28.2 bits (62), Expect = 1.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQG 60
Y C++C K FS K+ + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.5 bits (60), Expect = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQG 33
Y C +C K FS K+ + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQG 287
Y C +C K+FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQG 368
Y C +C K+FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQG 449
Y C +C K+FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQG 610
Y C +C K+FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQG 314
Y C +C K FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQG 395
Y C +C K FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQG 476
Y C +C K FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 7.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 198 YNCDLCSKEFSRKDNLTDHKKMHQG 222
Y+C +C K FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 7.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQG 556
Y C +C K FS K + H +H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 7.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQG 583
Y C +C K FS K + H +H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Length = 82
Score = 29.6 bits (66), Expect = 1.1
Identities = 17/83 (20%), Positives = 22/83 (26%), Gaps = 32/83 (38%)
Query: 139 HQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEYFFKRNLTEHKKLHQGIRY 198
H G +KCD C + G+R+ C C E
Sbjct: 19 HVG--FKCDNCGIEPIQ------------GVRWHCQDCPPEMSL---------------- 48
Query: 199 NCDLCSKEFSRKDNLTDHKKMHQ 221
D C HK+ HQ
Sbjct: 49 --DFCDSCSDCLHETDIHKEDHQ 69
Score = 27.3 bits (60), Expect = 6.6
Identities = 18/83 (21%), Positives = 23/83 (27%), Gaps = 32/83 (38%)
Query: 85 HQGIRYKCDLCSKDFSYKSSLIEHKKLHQGIRYKCNLCSKEFSRNCYLTEHMEQHQGIRY 144
H G +KCD C + G+R+ C C E S
Sbjct: 19 HVG--FKCDNCGIEPIQ------------GVRWHCQDCPPEMS----------------- 47
Query: 145 KCDLCSKDFSYKSSLIEHKKLHQ 167
D C HK+ HQ
Sbjct: 48 -LDFCDSCSDCLHETDIHKEDHQ 69
Score = 26.9 bits (59), Expect = 8.6
Identities = 17/65 (26%), Positives = 21/65 (32%), Gaps = 23/65 (35%)
Query: 527 HQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKC---------DLCSKEFSRKDNLTEH 577
H G +KCD C E + G+R+ C D C H
Sbjct: 19 HVG--FKCDNCGIEPIQ------------GVRWHCQDCPPEMSLDFCDSCSDCLHETDIH 64
Query: 578 KEIHQ 582
KE HQ
Sbjct: 65 KEDHQ 69
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme,
electron transfer, folate-ME enzyme, oxidoreductase;
HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia}
PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B*
3ada_B*
Length = 405
Score = 31.8 bits (73), Expect = 1.3
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 748 RTWKQRYFVNSTWYKHGGPIFLMIGGEGEASAKWMVEG 785
+T Q +VN W G F G G A +
Sbjct: 341 KTPIQNLYVNCGWGTGG---FKGTPGAGFTLAHTIAND 375
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 31.6 bits (71), Expect = 1.6
Identities = 25/162 (15%), Positives = 47/162 (29%), Gaps = 13/162 (8%)
Query: 451 RYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSR--KDNLTDRKIHQG------ 502
RY+ DL + + + +L + G L +E+ + KD R++
Sbjct: 896 RYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWP 955
Query: 503 ----IRYKCDLCSKEFSSKGNLTEHMKQHQGIRYKCDLCSK-EFSRKDNLTEHKEIHQGI 557
IR + F + + DL R N +
Sbjct: 956 LPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAV 1015
Query: 558 RYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKL 599
C L + + L E++ Q + +F R +
Sbjct: 1016 TLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSV 1057
Score = 31.6 bits (71), Expect = 1.7
Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 5/164 (3%)
Query: 197 RYNCDLCSKEFSRKDNLTDHKKMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKE 256
RY DL + + + +L + G+L + L + YK + ++F R+ +
Sbjct: 896 RYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLLDE--EYKQLVKDRKFLREVFVDGEAN 953
Query: 257 IHQG--IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQ- 313
IR + F + I + DL +G +
Sbjct: 954 WPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRD 1013
Query: 314 GIRYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKL 357
+ C L + + L E++ Q + +F R +
Sbjct: 1014 AVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSV 1057
Score = 29.3 bits (65), Expect = 9.9
Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 12/162 (7%)
Query: 289 RYKCDLCSKEFSRKGNLTKHMKLHQGIRYKCDLCLKEFSR--KDNLTEHKEIHQG----- 341
RY+ DL + + + +L + G L +E+ + KD + G
Sbjct: 896 RYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWP 955
Query: 342 ----IRYKCDLCSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKGNLTKHMKLHQ-GI 396
IR + F + I + DL +G + +
Sbjct: 956 LPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQNAQRDAV 1015
Query: 397 RYKCDLCLKEFSRKDNLTEHKEIHQGIRYKCDLCSKKFSRKL 438
C L + + L E++ Q + +F R +
Sbjct: 1016 TLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSV 1057
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 27.7 bits (61), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 9 YKCDL--CSKEFSRKYNLTDHKKIHQ 32
Y CD C K F R ++L HKK HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 27.3 bits (60), Expect = 2.3
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 532 YKCDL--CSKEFSRKDNLTEHKEIHQ 555
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 27.3 bits (60), Expect = 2.3
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 559 YKCDL--CSKEFSRKDNLTEHKEIHQ 582
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 2.7
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 683 YKCDL--CSKDFSRKDNLTEHKEIHQ 706
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 3.4
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 198 YNCDL--CSKEFSRKDNLTDHKKMHQ 221
Y+CD C K F R +L HKK HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.5 bits (58), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 236 YKCDL--CLKEFSRKDNLTEHKEIHQ 259
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.5 bits (58), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 317 YKCDL--CLKEFSRKDNLTEHKEIHQ 340
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.5 bits (58), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 398 YKCDL--CLKEFSRKDNLTEHKEIHQ 421
Y CD C K F R +L HK+ HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 263 YKCDL--CSKKFSRKLNLTKHMKIHQ 286
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 344 YKCDL--CSKKFSRKLNLTKHMKIHQ 367
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 425 YKCDL--CSKKFSRKLNLTKHMKIHQ 448
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.1 bits (57), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 586 YKCDL--CSKKFSRKLNLTKHMKIHQ 609
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 25.7 bits (56), Expect = 8.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 36 YKCNL--CSKEFSRKYNLTDHKKIHQ 59
Y C+ C K F R ++L HKK HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 25.7 bits (56), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 290 YKCDL--CSKEFSRKGNLTKHMKLHQ 313
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 25.7 bits (56), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 371 YKCDL--CSKEFSRKGNLTKHMKLHQ 394
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 25.7 bits (56), Expect = 9.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 452 YKCDL--CSKEFSRKGNLTKHMKLHQ 475
Y CD C K F R +L +H K HQ
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 27.9 bits (62), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 14 CSKEFSRKYNLTDHKKIHQGIR 35
C+K F R+YN+ H + H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 41 CSKEFSRKYNLTDHKKIHQGIR 62
C+K F R+YN+ H + H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 2.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 268 CSKKFSRKLNLTKHMKIHQGIR 289
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 2.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 349 CSKKFSRKLNLTKHMKIHQGIR 370
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 2.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 430 CSKKFSRKLNLTKHMKIHQGIR 451
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 2.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 591 CSKKFSRKLNLTKHMKIHQGIR 612
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.5 bits (61), Expect = 2.2
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 518 GNLTEHMKQHQGIRYKC--DLCSKEFSRKDNLTEHKEIHQGIR 558
G++ +++K+ ++C C+K F R+ N+ H + H R
Sbjct: 5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.4 bits (58), Expect = 5.6
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 221 QGNLTKHMKLHQGIRYKC--DLCLKEFSRKDNLTEHKEIHQGIR 262
+G++ K++K ++C C K F R+ N+ H + H R
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.4 bits (58), Expect = 5.7
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 679 QDIRYKC--DLCSKDFSRKDNLTEHKEIHQGIR 709
D ++C C+K F R+ N+ H + H R
Sbjct: 15 PDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.4 bits (58), Expect = 6.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 564 CSKEFSRKDNLTEHKEIHQGIR 585
C+K F R+ N+ H + H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 8.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 295 CSKEFSRKGNLTKHMKLHQGIR 316
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 8.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 376 CSKEFSRKGNLTKHMKLHQGIR 397
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 8.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 457 CSKEFSRKGNLTKHMKLHQGIR 478
C+K F R+ N+ H++ H R
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 27.0 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQ 113
YKC LC + F KS+L H+++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 27.0 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQ 167
YKC LC + F KS+L H+++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 27.0 bits (59), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 290 YKCDLCSKEFSRKGNLTKHMKLHQ 313
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 27.0 bits (59), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 371 YKCDLCSKEFSRKGNLTKHMKLHQ 394
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 27.0 bits (59), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 452 YKCDLCSKEFSRKGNLTKHMKLHQ 475
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 263 YKCDLCSKKFSRKLNLTKHMKIHQ 286
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 344 YKCDLCSKKFSRKLNLTKHMKIHQ 367
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 425 YKCDLCSKKFSRKLNLTKHMKIHQ 448
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 586 YKCDLCSKKFSRKLNLTKHMKIHQ 609
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 36 YKCNLCSKEFSRKYNLTDHKKIHQ 59
YKC LC + F K L+ H+++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 532 YKCDLCSKEFSRKDNLTEHKEIHQ 555
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 559 YKCDLCSKEFSRKDNLTEHKEIHQ 582
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.7 bits (58), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 683 YKCDLCSKDFSRKDNLTEHKEIHQ 706
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.3 bits (57), Expect = 4.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 9 YKCDLCSKEFSRKYNLTDHKKIHQ 32
YKC LC + F K L+ H+++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.5 bits (55), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 236 YKCDLCLKEFSRKDNLTEHKEIHQ 259
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.5 bits (55), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 317 YKCDLCLKEFSRKDNLTEHKEIHQ 340
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.5 bits (55), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 398 YKCDLCLKEFSRKDNLTEHKEIHQ 421
YKC LC + F K L+ H+ +H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 30.7 bits (68), Expect = 2.5
Identities = 21/183 (11%), Positives = 55/183 (30%), Gaps = 10/183 (5%)
Query: 720 EPSGVMFEKLPSDQW-FEQKLDHFNIEEPRTWKQR-YFVNSTWYKHG----GPIFLMIGG 773
E + ++L + W +++ ++I ++ G G + I
Sbjct: 12 EAPILGNDQLIENIWKMKREDSPYDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISW 71
Query: 774 EGEASAKWMVEGTWLDYAHNHNALAVQVEHRFYGKSHPLSDLSVESLQYLSAEQALADLA 833
G + + Y + +++R + L D + ++D+
Sbjct: 72 NGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIK 131
Query: 834 YFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKY-PHLVHGAMSASGPLRAVVDFPE 892
++ + + G S+ G A Y + + G + G P+
Sbjct: 132 EVVSFIKRDSG---QERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPK 188
Query: 893 YFG 895
++
Sbjct: 189 FYT 191
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR
complex function; HET: ADP; 2.31A {Pyrococcus furiosus}
PDB: 3ur3_C 4doz_A
Length = 693
Score = 30.8 bits (68), Expect = 2.6
Identities = 14/100 (14%), Positives = 30/100 (30%)
Query: 11 CDLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSKEFSRKYNLTDHKKIHQGIRYKCNLCSK 70
+ RK +K Q +KC++C + + ++ DH + + LC
Sbjct: 243 VKILDSLGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPM 302
Query: 71 EFSRNCYLTEHMEQHQGIRYKCDLCSKDFSYKSSLIEHKK 110
+ Y + + YK+ +
Sbjct: 303 CLIKRYYPVWIRSKTGQKIRFESVVDVALLYKNWRKIFDE 342
Score = 30.4 bits (67), Expect = 3.3
Identities = 21/154 (13%), Positives = 46/154 (29%), Gaps = 3/154 (1%)
Query: 534 CDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIR---YKCDL 590
+ RK ++ Q +KC +C + + ++ +H + C +
Sbjct: 243 VKILDSLGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPM 302
Query: 591 CSKKFSRKLNLTKHMKIHQGIRYKCDLCSKEFSRKDIPYEVTVKEESYEGDSINVEENNG 650
C K + + D+ + + I E K+ + ++ +
Sbjct: 303 CLIKRYYPVWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLVSKAREVSEDFVKD 362
Query: 651 NDAVTRDCLEFFKTEQNTTLGKLNKILHQDIRYK 684
N V D E + NK + + K
Sbjct: 363 NMLVDSDLYYSSTWESGLSKKLKNKKEIDEEKVK 396
>4f53_A SUSD homolog; TPR-like protein, mucin O-glycan binding, structural
genomic center for structural genomics, JCSG; 2.25A
{Bacteroides ovatus}
Length = 520
Score = 30.6 bits (68), Expect = 3.0
Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 27/159 (16%)
Query: 757 NSTWYKHGGPIFLMIGGE-----GEASAK-WMVEGTWLDYAHNHNALAVQVEHRFYGKS- 809
+ I + E E + + W + GT A + +++ G +
Sbjct: 322 SCMKVTTSDNIVVFRASEVAFLRAEGALRNWNMGGT----AKDFYEEGIRLSFEENGITS 377
Query: 810 ----------------HPLSDLSVESLQYLSAEQALADLAYFITSMNTLYSLPAHTKWIA 853
PL S ++ Y A +A+ KWIA
Sbjct: 378 GVENYLASTGKVEAYKDPLKGQSAQTYDYSGAINTNVTVAWSGGDFEKSLEQIITQKWIA 437
Query: 854 FGGSYPGALAAWLRYKYPHLVHGAMSASGPLRAVVDFPE 892
+ + + R YP L+ A +ASG + +
Sbjct: 438 NFPNGMESWTEYRRTGYPKLMPMAANASGGIVNDAEGAR 476
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase,
peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Length = 688
Score = 30.4 bits (69), Expect = 3.7
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Query: 706 QGIRVSDINHGTLGEPSGVMFEKLPSDQWFEQKLDHFNIE 745
G + + G + E D F QKL HF+ E
Sbjct: 28 FGGNIEEQFSLKAGGRGSTLLE----DFIFRQKLQHFDHE 63
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 29.3 bits (65), Expect = 4.0
Identities = 16/124 (12%), Positives = 32/124 (25%), Gaps = 5/124 (4%)
Query: 472 KLHQGIRYKCDLCLKEFSRKDNLTDRKIHQGIRYKCDLC----SKEFSSKGNLTEHMKQH 527
K + +KC + + D + I C +L +H
Sbjct: 47 KSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHC 106
Query: 528 QGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYKCDLCSKEFSRKDNLTEHKEIHQGIRYK 587
+ C C + F + + + CD C+ + +D H +
Sbjct: 107 EFALMDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFED-KEIHDQNCPLALEH 165
Query: 588 CDLC 591
Sbjct: 166 HHHH 169
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 26.8 bits (58), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 85 HQGIRYKCDLCSKDFSYKSSLIEHKKLHQG 114
H RY+C C F+ + LI+H+K H
Sbjct: 8 HTRKRYECSKCQATFNLRKHLIQHQKTHAA 37
Score = 26.8 bits (58), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 139 HQGIRYKCDLCSKDFSYKSSLIEHKKLHQG 168
H RY+C C F+ + LI+H+K H
Sbjct: 8 HTRKRYECSKCQATFNLRKHLIQHQKTHAA 37
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 26.7 bits (58), Expect = 5.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 90 YKCDLCSKDFSYKSSLIEHKKLHQG 114
++C C + F SLIEH+ LH G
Sbjct: 13 HQCRECGEIFFQYVSLIEHQVLHMG 37
Score = 26.7 bits (58), Expect = 5.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 144 YKCDLCSKDFSYKSSLIEHKKLHQG 168
++C C + F SLIEH+ LH G
Sbjct: 13 HQCRECGEIFFQYVSLIEHQVLHMG 37
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 26.3 bits (58), Expect = 6.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 505 YKCDLCSKEFSSKGNLTEHMKQHQ 528
Y C C +EF S L HM H+
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHR 30
>3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller,
glycoside hydrolase family GH117,
agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia
galactanivorans}
Length = 408
Score = 29.5 bits (65), Expect = 6.1
Identities = 12/88 (13%), Positives = 26/88 (29%), Gaps = 5/88 (5%)
Query: 707 GIRVSDINHGTLGEPSGVMFEKLPSDQWFEQKLDHFNIEEPRTWKQRYFVNSTWYKHGGP 766
G+ +D G + + + W ++ D F + + + + + G
Sbjct: 202 GLAWADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGK 261
Query: 767 IFLMIGGEGEASAKWMVEGTWLDYAHNH 794
+L GE T+ H
Sbjct: 262 FYLYYKGEQMGE-----AITFGGRQIRH 284
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET:
PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB:
1qtr_A* 1x2b_A* 1x2e_A*
Length = 317
Score = 29.4 bits (65), Expect = 6.2
Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 25/116 (21%)
Query: 763 HGGPIFLMIGGEGEASAKWMVEGTWLDYAHNHNALAVQVEHRFYGKSHPLSDLSVESLQY 822
HGGP GG + D + + R G+S P + L + +
Sbjct: 44 HGGP-----GGGISPHHRQ-----LFDPERYK---VLLFDQRGCGRSRPHASLDNNTTWH 90
Query: 823 LSAEQALADLAYFITSMNTLYSLPAHTKWIAFGGSYPGALAAWLRYKYPHLVHGAM 878
L +AD+ +W+ FGGS+ LA +P V +
Sbjct: 91 L-----VADIERLREMAG-------VEQWLVFGGSWGSTLALAYAQTHPERVSEMV 134
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate
decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A
{Saccharomyces cerevisiae} PDB: 3gdl_A* 3gdk_A* 3gdt_A*
3gdr_A* 1dqw_A 1dqx_A*
Length = 267
Score = 29.3 bits (65), Expect = 6.5
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 913 QTATHTISKMLKSPSDAKYLTEQFKLCTPLDINNAKDVSSFVESLADNIAGVVQYNKDNR 972
T ++ L + K Q LC LD+ K++ VE+L I + +
Sbjct: 11 ATHPSPVAAKLFNIMHEK----QTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILT 66
Query: 973 ESSNHITIDDLCALLMDK 990
+ S T+ L AL
Sbjct: 67 DFSMEGTVKPLKALSAKY 84
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 25.8 bits (56), Expect = 7.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 263 YKCDLCSKKFSRKLNLTKHMK 283
+ C C K+F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.8 bits (56), Expect = 7.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 344 YKCDLCSKKFSRKLNLTKHMK 364
+ C C K+F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.8 bits (56), Expect = 7.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 425 YKCDLCSKKFSRKLNLTKHMK 445
+ C C K+F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.8 bits (56), Expect = 7.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 586 YKCDLCSKKFSRKLNLTKHMK 606
+ C C K+F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.4 bits (55), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 290 YKCDLCSKEFSRKGNLTKHMK 310
+ C C K F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.4 bits (55), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 371 YKCDLCSKEFSRKGNLTKHMK 391
+ C C K F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.4 bits (55), Expect = 9.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 452 YKCDLCSKEFSRKGNLTKHMK 472
+ C C K F R L+KH+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 28.0 bits (61), Expect = 8.2
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 10/92 (10%)
Query: 199 NCDLCSKEFSRKDNLTDHK--KMHQGNLTKHMKLHQGIRYKCDLCLKEFSRKDNLTEHKE 256
C +CS + H + H + ++M ++QG K + + E +
Sbjct: 34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS 93
Query: 257 IHQGIRYKCDLCSKKFSRKLNLTKHM--KIHQ 286
C +C+ FS + H K H
Sbjct: 94 KC------CPVCNMTFSSPVVAESHYIGKTHI 119
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 25.9 bits (56), Expect = 8.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 258 HQGIR-YKCDLCSKKFSRKLNLTKHMKIH 285
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.9 bits (56), Expect = 8.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 339 HQGIR-YKCDLCSKKFSRKLNLTKHMKIH 366
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.9 bits (56), Expect = 8.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 420 HQGIR-YKCDLCSKKFSRKLNLTKHMKIH 447
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.9 bits (56), Expect = 8.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 581 HQGIR-YKCDLCSKKFSRKLNLTKHMKIH 608
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.5 bits (55), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 285 HQGIR-YKCDLCSKEFSRKGNLTKHMKLH 312
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.5 bits (55), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 366 HQGIR-YKCDLCSKEFSRKGNLTKHMKLH 393
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.5 bits (55), Expect = 9.0
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 447 HQGIR-YKCDLCSKEFSRKGNLTKHMKLH 474
G R + C +C F+ K N +H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.9 bits (56), Expect = 8.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 259 QGIRYKCDLCSKKFSRKLNLTKHMKIH 285
G+ Y C +C +KF +L+ +HM +H
Sbjct: 6 SGLLYDCHICERKFKNELDRDRHMLVH 32
Score = 25.9 bits (56), Expect = 8.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 340 QGIRYKCDLCSKKFSRKLNLTKHMKIH 366
G+ Y C +C +KF +L+ +HM +H
Sbjct: 6 SGLLYDCHICERKFKNELDRDRHMLVH 32
Score = 25.9 bits (56), Expect = 8.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 421 QGIRYKCDLCSKKFSRKLNLTKHMKIH 447
G+ Y C +C +KF +L+ +HM +H
Sbjct: 6 SGLLYDCHICERKFKNELDRDRHMLVH 32
Score = 25.9 bits (56), Expect = 8.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 582 QGIRYKCDLCSKKFSRKLNLTKHMKIH 608
G+ Y C +C +KF +L+ +HM +H
Sbjct: 6 SGLLYDCHICERKFKNELDRDRHMLVH 32
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.6 bits (55), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 504 RYKCDLCSKEFSSKGNLTEHMKQH 527
+ CD+C K+F SKG L H H
Sbjct: 9 THLCDMCGKKFKSKGTLKSHKLLH 32
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.135 0.420
Gapped
Lambda K H
0.267 0.0505 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 15,427,301
Number of extensions: 922061
Number of successful extensions: 8253
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6094
Number of HSP's successfully gapped: 3489
Length of query: 1042
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 939
Effective length of database: 3,825,930
Effective search space: 3592548270
Effective search space used: 3592548270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.2 bits)