BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3686
(296 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/160 (72%), Positives = 137/160 (85%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+DV+I MELM TC ++L KR+ +PE I GK+T++ VKAL+YLKE HGVIHRDVKPSNI
Sbjct: 97 TDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
LLDERG IKLCDFGISGRLVD KA+ ++AGCAAYMAPERI+PP+P KPDYDIRADVWSLG
Sbjct: 157 LLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG 216
Query: 128 ITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLF 167
I+LVELATG+FPYK+CK DFEVL++VL + PP LP F
Sbjct: 217 ISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF 256
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 199 bits (506), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 130/190 (68%), Gaps = 11/190 (5%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVS----VPEPICGKITLSTVKALHYLKETHGVIHRD 61
+E D WICMELM+T FD+ K ++ +PE I GKITL+TVKAL++LKE +IHRD
Sbjct: 92 REGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNILLD GNIKLCDFGISG+LVDS A+T++AGC YMAPERI+ P+ + YD+R+
Sbjct: 152 IKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID-PSASRQGYDVRS 210
Query: 122 DVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN------DPLFGRTIKASI 175
DVWSLGITL ELATG FPY F+ L++V+ PP L N P F + +
Sbjct: 211 DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270
Query: 176 AKDNGRSTEF 185
KD + ++
Sbjct: 271 TKDESKRPKY 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 4/162 (2%)
Query: 6 KESDVWICMELMATCFDRLLKRL---HVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
+E DVWICMELM T D+ K++ ++PE I GKI +S VKAL +L VIHRDV
Sbjct: 121 REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 180
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KPSN+L++ G +K+CDFGISG LVDS A+T +AGC YMAPERI P QK Y +++D
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK-GYSVKSD 239
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPND 164
+WSLGIT++ELA FPY F+ L +V+ + P LP D
Sbjct: 240 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 281
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 6 KESDVWICMELMATCFDRLLKRL---HVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
+E DVWICMELM T D+ K++ ++PE I GKI +S VKAL +L VIHRDV
Sbjct: 77 REGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 136
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KPSN+L++ G +K+CDFGISG LVD A+ +AGC YMAPERI P QK Y +++D
Sbjct: 137 KPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK-GYSVKSD 195
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPND 164
+WSLGIT++ELA FPY F+ L +V+ + P LP D
Sbjct: 196 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 103/162 (63%), Gaps = 4/162 (2%)
Query: 6 KESDVWICMELMATCFDRLLKRL---HVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
+E DVWIC EL T D+ K++ ++PE I GKI +S VKAL +L VIHRDV
Sbjct: 104 REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDV 163
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KPSN+L++ G +K CDFGISG LVD A+ +AGC Y APERI P QK Y +++D
Sbjct: 164 KPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQK-GYSVKSD 222
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPND 164
+WSLGIT +ELA FPY F+ L +V+ + P LP D
Sbjct: 223 IWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 264
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 108/161 (67%), Gaps = 11/161 (6%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 95 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 153
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 154 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 207
Query: 126 LGITLVELATGEFPY---KDCKCDFEVLSRVLNDAPPCLPN 163
+G++LVE+A G +P FE+L ++N+ PP LP+
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPS 248
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 111/167 (66%), Gaps = 17/167 (10%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 188
Query: 126 LGITLVELATGEFPY--KDCKCD-------FEVLSRVLNDAPPCLPN 163
+G++LVE+A G +P D K D FE+L ++N+ PP LP+
Sbjct: 189 MGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPS 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 79 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 137
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+D A + G +YM+PER+ Q Y +++D+WS
Sbjct: 138 NILVNSRGEIKLCDFGVSGQLIDEMA-NEFVGTRSYMSPERL-----QGTHYSVQSDIWS 191
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
+G++LVE+A G +P + FE+L ++N+ PP LP+
Sbjct: 192 MGLSLVEMAVGRYP-RPPMAIFELLDYIVNEPPPKLPS 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 138 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 196
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 197 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 250
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 251 MGLSLVEMAVGRYP 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 161
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 215
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 216 MGLSLVEMAVGRYP 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 188
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 188
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 188
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK+ +PE I GK++++ +K L YL+E H ++HRDVKPS
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 134
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YM+PER+ Q Y +++D+WS
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSPERL-----QGTHYSVQSDIWS 188
Query: 126 LGITLVELATGEFP 139
+G++LVE+A G +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 94/134 (70%), Gaps = 8/134 (5%)
Query: 7 ESDVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ICME M D++LK +PE I GK++++ ++ L YL+E H ++HRDVKPS
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPS 144
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NIL++ RG IKLCDFG+SG+L+DS A + G +YMAPER+ Q Y +++D+WS
Sbjct: 145 NILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMAPERL-----QGTHYSVQSDIWS 198
Query: 126 LGITLVELATGEFP 139
+G++LVELA G +P
Sbjct: 199 MGLSLVELAVGRYP 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 15/178 (8%)
Query: 6 KESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
K + +WI ME + + D LLK + E I +K L YL + IHRD+K
Sbjct: 88 KSTKLWIIMEYLGGGSALD-LLKP--GPLEETYIATILREILKGLDYL-HSERKIHRDIK 143
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
+N+LL E+G++KL DFG++G+L D++ R G +MAPE I ++ YD +AD
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-----KQSAYDFKAD 198
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLP--NDPLFGRTIKASIAKD 178
+WSLGIT +ELA GE P D VL + ++PP L + F ++A + KD
Sbjct: 199 IWSLGITAIELAKGEPPNSDLH-PMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKD 255
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 11/171 (6%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
K S +WI ME + L R E + +K L YL + IHRD+K +
Sbjct: 92 KGSKLWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYL-HSEKKIHRDIKAA 149
Query: 66 NILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LL E+G++KL DFG++G+L D++ R G +MAPE I Q+ YD +AD+W
Sbjct: 150 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----QQSAYDSKADIW 204
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASI 175
SLGIT +ELA GE P D VL + + PP L D F ++ K I
Sbjct: 205 SLGITAIELAKGEPPNSDMHP-MRVLFLIPKNNPPTLVGD--FTKSFKEFI 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPI----CGKITLSTVKALHYLKETHGVIHRD 61
K++ +WI ME + L + P P+ I +K L YL + IHRD
Sbjct: 91 KDTKLWIIMEYLGGG-----SALDLLEPGPLDETQIATILREILKGLDYL-HSEKKIHRD 144
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
+K +N+LL E G +KL DFG++G+L D++ R G +MAPE I ++ YD +
Sbjct: 145 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-----KQSAYDSK 199
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
AD+WSLGIT +ELA GE P+ + +VL + + PP L
Sbjct: 200 ADIWSLGITAIELARGEPPHSELH-PMKVLFLIPKNNPPTL 239
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 87/161 (54%), Gaps = 17/161 (10%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPI----CGKITLSTVKALHYLKETHGVIHRD 61
K++ +WI ME + L + P P+ I +K L YL + IHRD
Sbjct: 96 KDTKLWIIMEYLGGG-----SALDLLEPGPLDETQIATILREILKGLDYL-HSEKKIHRD 149
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
+K +N+LL E G +KL DFG++G+L D++ R G +MAPE I ++ YD +
Sbjct: 150 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----KQSAYDSK 204
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
AD+WSLGIT +ELA GE P+ + +VL + + PP L
Sbjct: 205 ADIWSLGITAIELARGEPPHSELH-PMKVLFLIPKNNPPTL 244
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPI----CGKITLSTVKALHYLKETHGVIHRD 61
K++ +WI ME + L + P P+ I +K L YL + IHRD
Sbjct: 76 KDTKLWIIMEYLGGG-----SALDLLEPGPLDETQIATILREILKGLDYL-HSEKKIHRD 129
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
+K +N+LL E G +KL DFG++G+L D++ R G +MAPE I ++ YD +
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----KQSAYDSK 184
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPND 164
AD+WSLGIT +ELA GE P+ + +VL + + PP L +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELH-PMKVLFLIPKNNPPTLEGN 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 17/164 (10%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPI----CGKITLSTVKALHYLKETHGVIHRD 61
K++ +WI ME + L + P P+ I +K L YL + IHRD
Sbjct: 76 KDTKLWIIMEYLGGG-----SALDLLEPGPLDETQIATILREILKGLDYL-HSEKKIHRD 129
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
+K +N+LL E G +KL DFG++G+L D++ R G +MAPE I ++ YD +
Sbjct: 130 IKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-----KQSAYDSK 184
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPND 164
AD+WSLGIT +ELA GE P+ + +VL + + PP L +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELH-PMKVLFLIPKNNPPTLEGN 227
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 6 KESDVWICMEL-MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
K +D+WI ME A +++ + ++ E I ST+K L YL IHRD+K
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKA 153
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKA-RTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
NILL+ G+ KL DFG++G+L D A R G +MAPE I Q+ Y+ AD+
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-----QEIGYNCVADI 208
Query: 124 WSLGITLVELATGEFPYKDC 143
WSLGIT +E+A G+ PY D
Sbjct: 209 WSLGITAIEMAEGKPPYADI 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 22/168 (13%)
Query: 9 DVWICMELMA--TCFDRLLKRL-----HVS--VPEPICGKITLSTVKALHYLKETHGVIH 59
++W+ M+L++ + D ++K + H S + E I ++ L YL + +G IH
Sbjct: 87 ELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK-NGQIH 144
Query: 60 RDVKPSNILLDERGNIKLCDFGIS------GRLVDSKARTKNAGCAAYMAPERIEPPNPQ 113
RDVK NILL E G++++ DFG+S G + +K R G +MAPE +E Q
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME----Q 200
Query: 114 KPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
YD +AD+WS GIT +ELATG PY +VL L + PP L
Sbjct: 201 VRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSL 247
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 22/168 (13%)
Query: 9 DVWICMELMA--TCFDRLLKRL-----HVS--VPEPICGKITLSTVKALHYLKETHGVIH 59
++W+ M+L++ + D ++K + H S + E I ++ L YL + +G IH
Sbjct: 82 ELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK-NGQIH 139
Query: 60 RDVKPSNILLDERGNIKLCDFGIS------GRLVDSKARTKNAGCAAYMAPERIEPPNPQ 113
RDVK NILL E G++++ DFG+S G + +K R G +MAPE +E Q
Sbjct: 140 RDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME----Q 195
Query: 114 KPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
YD +AD+WS GIT +ELATG PY +VL L + PP L
Sbjct: 196 VRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSL 242
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 7 ESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+++WI +E A D ++ L + E + T+ AL+YL + + +IHRD+K
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAG 164
Query: 66 NILLDERGNIKLCDFGISGRLVDS-KARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
NIL G+IKL DFG+S + + + R G +MAPE + + YD +ADVW
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASIAK 177
SLGITL+E+A E P+ + VL ++ PP L + K + K
Sbjct: 225 SLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 5/174 (2%)
Query: 7 ESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+++WI +E A D ++ L + E + T+ AL+YL + + +IHRD+K
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAG 137
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNA--GCAAYMAPERIEPPNPQKPDYDIRADV 123
NIL G+IKL DFG+S + + + +++ G +MAPE + + YD +ADV
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 124 WSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASIAK 177
WSLGITL+E+A E P+ + VL ++ PP L + K + K
Sbjct: 198 WSLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 250
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 7 ESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+++WI +E A D ++ L + E + T+ AL+YL + + +IHRD+K
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAG 164
Query: 66 NILLDERGNIKLCDFGISGRLVDS-KARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
NIL G+IKL DFG+S + + R G +MAPE + + YD +ADVW
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASIAK 177
SLGITL+E+A E P+ + VL ++ PP L + K + K
Sbjct: 225 SLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 7 ESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+++WI +E A D ++ L + E + T+ AL+YL + + +IHRD+K
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD-NKIIHRDLKAG 164
Query: 66 NILLDERGNIKLCDFGISGRLVDS-KARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
NIL G+IKL DFG+S + + R G +MAPE + + YD +ADVW
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASIAK 177
SLGITL+E+A E P+ + VL ++ PP L + K + K
Sbjct: 225 SLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 10 VWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
+WI +E D ++ L + EP + ++AL++L + +IHRD+K N+L
Sbjct: 91 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL-HSKRIIHRDLKAGNVL 149
Query: 69 LDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
+ G+I+L DFG+S + L + R G +MAPE + + YD +AD+WSLG
Sbjct: 150 MTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 128 ITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
ITL+E+A E P+ + VL ++ PP L
Sbjct: 210 ITLIEMAQIEPPHHELN-PMRVLLKIAKSDPPTL 242
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 10 VWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
+WI +E D ++ L + EP + ++AL++L + +IHRD+K N+L
Sbjct: 83 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL-HSKRIIHRDLKAGNVL 141
Query: 69 LDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
+ G+I+L DFG+S + L + R G +MAPE + + YD +AD+WSLG
Sbjct: 142 MTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 201
Query: 128 ITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
ITL+E+A E P+ + VL ++ PP L
Sbjct: 202 ITLIEMAQIEPPHHELN-PMRVLLKIAKSDPPTL 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 2 SPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIH 59
+P + +W+ ME + D + ++ E I ++ L +L + H VIH
Sbjct: 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ-HKVIH 152
Query: 60 RDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYD 118
RD+K N+LL E +KL DFG+S +L + R G +MAPE I YD
Sbjct: 153 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYD 212
Query: 119 IRADVWSLGITLVELATGEFP 139
++D+WSLGIT +E+A G P
Sbjct: 213 FKSDLWSLGITAIEMAEGAPP 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + LS ++AL YL GVIHRD+K +I
Sbjct: 116 ELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYL-HNQGVIHRDIKSDSI 172
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G IKL DFG ++ + K G +MAPE I + Y D+WSL
Sbjct: 173 LLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVIS-----RLPYGTEVDIWSL 227
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPP 159
GI ++E+ GE PY + + + + R+ + PP
Sbjct: 228 GIMVIEMIDGEPPYFN-EPPLQAMRRIRDSLPP 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
E D+++ ++L+ R + +V E V AL YL + +IHRD+KP N
Sbjct: 87 EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL-QNQRIIHRDMKPDN 145
Query: 67 ILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
ILLDE G++ + DF I+ L T AG YMAPE + + Y D WSL
Sbjct: 146 ILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFS--SRKGAGYSFAVDWWSL 203
Query: 127 GITLVELATGEFPY 140
G+T EL G PY
Sbjct: 204 GVTAYELLRGRRPY 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 222 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 278
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 279 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 333
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 334 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 369
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 20 CFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---I 75
FD ++ R+ + V + K LS V LH H ++HRD+KP N+LL+ + I
Sbjct: 123 LFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH----KHNIVHRDLKPENLLLESKEKDALI 178
Query: 76 KLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
K+ DFG+S + K + G A Y+APE + + YD + DVWS+G+ L L
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVL------RKKYDEKCDVWSIGVILFILLA 232
Query: 136 GEFPYKDCKCDFEVLSRV 153
G P+ + D E+L +V
Sbjct: 233 GYPPF-GGQTDQEILRKV 249
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 145 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 201
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 202 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 256
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 257 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 292
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 27/158 (17%)
Query: 10 VWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
V++ ELM D++L++ S E + + K + YL GV+HRD+KPSNI
Sbjct: 91 VYVVTELMKGGELLDKILRQKFFSERE--ASAVLFTITKTVEYL-HAQGVVHRDLKPSNI 147
Query: 68 L-LDERGN---IKLCDFGISGRLVDSKARTKNA------GCAAYMAPERIEPPNPQKPDY 117
L +DE GN I++CDFG + +L R +N A ++APE +E + Y
Sbjct: 148 LYVDESGNPESIRICDFGFAKQL-----RAENGLLMTPCYTANFVAPEVLE-----RQGY 197
Query: 118 DIRADVWSLGITLVELATGEFPYKDCKCDF--EVLSRV 153
D D+WSLG+ L + TG P+ + D E+L+R+
Sbjct: 198 DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 102 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 158
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 159 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 213
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 214 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 249
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 100 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 156
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 157 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 211
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 212 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 247
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 95 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 151
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 152 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 206
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 207 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 242
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICMELM-ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME + ++ H + E + L+ ++AL L GVIHRD+K +I
Sbjct: 91 ELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVL-HAQGVIHRDIKSDSI 147
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ R K G +MAPE I + Y D+WSL
Sbjct: 148 LLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS-----RLPYGPEVDIWSL 202
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + + + + ++ PP L N
Sbjct: 203 GIMVIEMVDGEPPYFN-EPPLKAMKMIRDNLPPRLKN 238
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 56 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQK 114
G+I+RD+KP NILLDE G+IKL DFG+S +D + + + G YMAPE + +
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV-----NR 204
Query: 115 PDYDIRADVWSLGITLVELATGEFPYK 141
+ AD WS G+ + E+ TG P++
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 9 DVWICME-LMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++W+ ME L ++ ++ ++ E + + ++AL YL GVIHRD+K +I
Sbjct: 116 ELWVLMEFLQGGALTDIVSQVRLN--EEQIATVCEAVLQALAYL-HAQGVIHRDIKSDSI 172
Query: 68 LLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
LL G +KL DFG ++ D R G +MAPE I + Y D+WSL
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS-----RSLYATEVDIWSL 227
Query: 127 GITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
GI ++E+ GE PY + + R+ + PP L N
Sbjct: 228 GIMVIEMVDGEPPYF-SDSPVQAMKRLRDSPPPKLKN 263
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 56 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQK 114
G+I+RD+KP NILLDE G+IKL DFG+S +D + + + G YMAPE + +
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 200
Query: 115 PDYDIRADVWSLGITLVELATGEFPYK 141
+ AD WS G+ + E+ TG P++
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 56 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQK 114
G+I+RD+KP NILLDE G+IKL DFG+S +D + + + G YMAPE + +
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 200
Query: 115 PDYDIRADVWSLGITLVELATGEFPYK 141
+ AD WS G+ + E+ TG P++
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 56 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQK 114
G+I+RD+KP NILLDE G+IKL DFG+S +D + + + G YMAPE + +
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 201
Query: 115 PDYDIRADVWSLGITLVELATGEFPYK 141
+ AD WS G+ + E+ TG P++
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 11 WICMELM--ATCFDRLLKRLHVSVPEP-ICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++ +LM FD L +++ +S E + L + ALH L ++HRD+KP NI
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENI 155
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIE-PPNPQKPDYDIRADVWSL 126
LLD+ NIKL DFG S +L + + G +Y+APE IE N P Y D+WS
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 216 GVIMYTLLAGSPPF 229
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+E W+ ME LL+ + E +T ++ L YL +H +IHRDVK
Sbjct: 125 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL-HSHNMIHRDVKAG 183
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NILL E G +KL DFG + + + G +MAPE I + + YD + DVWS
Sbjct: 184 NILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAPEVILAMD--EGQYDGKVDVWS 238
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRVLNDAP 158
LGIT +ELA + P + + N++P
Sbjct: 239 LGITCIELAERKPPLFNMNAMSALYHIAQNESP 271
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 11 WICMELM--ATCFDRLLKRLHVSVPEP-ICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++ +LM FD L +++ +S E + L + ALH L ++HRD+KP NI
Sbjct: 87 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENI 142
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIE-PPNPQKPDYDIRADVWSL 126
LLD+ NIKL DFG S +L + + G +Y+APE IE N P Y D+WS
Sbjct: 143 LLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 202
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 203 GVIMYTLLAGSPPF 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 7/156 (4%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+E W+ ME LL+ + E +T ++ L YL +H +IHRDVK
Sbjct: 86 REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL-HSHNMIHRDVKAG 144
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
NILL E G +KL DFG + + + G +MAPE I + + YD + DVWS
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMD--EGQYDGKVDVWS 199
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
LGIT +ELA + P + L + + P L
Sbjct: 200 LGITCIELAERKPPLFNMNA-MSALYHIAQNESPAL 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 11 WICMELM--ATCFDRLLKRLHVSVPEP-ICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++ +LM FD L +++ +S E + L + ALH L ++HRD+KP NI
Sbjct: 100 FLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENI 155
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIE-PPNPQKPDYDIRADVWSL 126
LLD+ NIKL DFG S +L + G +Y+APE IE N P Y D+WS
Sbjct: 156 LLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 215
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 216 GVIMYTLLAGSPPF 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%)
Query: 6 KESDVWICMELM-ATCFDRLLKRLHVS---VPEPICGKITLSTVKALHYLKETHGVIHRD 61
+++++ I +EL A R++K +PE K + AL ++ + V+HRD
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM-HSRRVMHRD 161
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA--GCAAYMAPERIEPPNPQKPDYDI 119
+KP+N+ + G +KL D G+ GR SK ++ G YM+PERI + Y+
Sbjct: 162 IKPANVFITATGVVKLGDLGL-GRFFSSKTTAAHSLVGTPYYMSPERI-----HENGYNF 215
Query: 120 RADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLN--DAPPCLPND 164
++D+WSLG L E+A + P+ K + L + + D PP LP+D
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPP-LPSD 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 27/158 (17%)
Query: 10 VWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
V++ EL D++L++ S E + + K + YL GV+HRD+KPSNI
Sbjct: 91 VYVVTELXKGGELLDKILRQKFFSERE--ASAVLFTITKTVEYL-HAQGVVHRDLKPSNI 147
Query: 68 L-LDERGN---IKLCDFGISGRLVDSKARTKNA------GCAAYMAPERIEPPNPQKPDY 117
L +DE GN I++CDFG + +L R +N A ++APE +E + Y
Sbjct: 148 LYVDESGNPESIRICDFGFAKQL-----RAENGLLXTPCYTANFVAPEVLE-----RQGY 197
Query: 118 DIRADVWSLGITLVELATGEFPYKDCKCDF--EVLSRV 153
D D+WSLG+ L TG P+ + D E+L+R+
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARI 235
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 28/143 (19%)
Query: 9 DVWICMELMA----------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
++W+ ME +A TC D E + ++AL +L ++ VI
Sbjct: 91 ELWVVMEYLAGGSLTDVVTETCMD-----------EGQIAAVCRECLQALEFL-HSNQVI 138
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
HRD+K NILL G++KL DFG ++ + R++ G +MAPE + + Y
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV-----TRKAY 193
Query: 118 DIRADVWSLGITLVELATGEFPY 140
+ D+WSLGI +E+ GE PY
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
S +I EL FD ++KR S E +I + Y+ + H ++HRD+KP
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMHK-HNIVHRDLKPE 150
Query: 66 NILLDERG---NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
NILL+ + +IK+ DFG+S + G A Y+APE + + YD + D
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------RGTYDEKCD 204
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
VWS G+ L L +G P+ K ++++L RV
Sbjct: 205 VWSAGVILYILLSGTPPFY-GKNEYDILKRV 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 9 DVWICMELMA----------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
++W+ ME +A TC D E + ++AL +L ++ VI
Sbjct: 91 ELWVVMEYLAGGSLTDVVTETCMD-----------EGQIAAVCRECLQALEFL-HSNQVI 138
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
HRD+K NILL G++KL DFG ++ + R+ G +MAPE + + Y
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-----TRKAY 193
Query: 118 DIRADVWSLGITLVELATGEFPY 140
+ D+WSLGI +E+ GE PY
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 9 DVWICMELMA----------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
++W+ ME +A TC D E + ++AL +L ++ VI
Sbjct: 92 ELWVVMEYLAGGSLTDVVTETCMD-----------EGQIAAVCRECLQALEFL-HSNQVI 139
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
HRD+K NILL G++KL DFG ++ + R+ G +MAPE + + Y
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-----TRKAY 194
Query: 118 DIRADVWSLGITLVELATGEFPY 140
+ D+WSLGI +E+ GE PY
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 9 DVWICMELMA----------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
++W+ ME +A TC D E + ++AL +L ++ VI
Sbjct: 91 ELWVVMEYLAGGSLTDVVTETCMD-----------EGQIAAVCRECLQALEFL-HSNQVI 138
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
HRD+K NILL G++KL DFG ++ + R+ G +MAPE + + Y
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-----TRKAY 193
Query: 118 DIRADVWSLGITLVELATGEFPY 140
+ D+WSLGI +E+ GE PY
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAA 100
+ ++ LHY K +IHRD+KPSN+L+ E G+IK+ DFG+S S A N G A
Sbjct: 147 IKGIEYLHYQK----IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA 202
Query: 101 YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
+MAPE + +K DVW++G+TL G+ P+ D
Sbjct: 203 FMAPESLS--ETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 10 VWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTV-KALHYLKETHGVIHRDVKPSN 66
V++ ELM D++L++ S E L T+ K + YL + GV+HRD+KPSN
Sbjct: 96 VYLVTELMRGGELLDKILRQKFFSERE---ASFVLHTIGKTVEYL-HSQGVVHRDLKPSN 151
Query: 67 IL-LDERGN---IKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
IL +DE GN +++CDFG + +L ++ A ++APE + ++ YD
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-----KRQGYDEGC 206
Query: 122 DVWSLGITLVELATGEFPYKDCKCDF--EVLSRV 153
D+WSLGI L + G P+ + D E+L+R+
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 10 VWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTV-KALHYLKETHGVIHRDVKPSN 66
V++ ELM D++L++ S E L T+ K + YL + GV+HRD+KPSN
Sbjct: 96 VYLVTELMRGGELLDKILRQKFFSERE---ASFVLHTIGKTVEYL-HSQGVVHRDLKPSN 151
Query: 67 IL-LDERGN---IKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
IL +DE GN +++CDFG + +L ++ A ++APE + ++ YD
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL-----KRQGYDEGC 206
Query: 122 DVWSLGITLVELATGEFPYKDCKCDF--EVLSRV 153
D+WSLGI L + G P+ + D E+L+R+
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 84/197 (42%), Gaps = 21/197 (10%)
Query: 9 DVWICMELMAT--------CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHR 60
+V+I E M F L K +P + I S + + Y+ + HR
Sbjct: 117 EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR 176
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
DVKPSNIL+D+ G +KL DFG S +VD K + + G +M PE + +
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG-SRGTYEFMPPEFFSNESSYNG---AK 232
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLS--RVLNDAPPCLPNDPLFGRTIKASIAKD 178
D+WSLGI L + P+ E+ + R N P N L+ T K S +
Sbjct: 233 VDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSN 292
Query: 179 NGRSTE-------FIRK 188
N S E F+RK
Sbjct: 293 NFLSNEDIDFLKLFLRK 309
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
S +I EL FD ++KR S E +I + Y+ + H ++HRD+KP
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMHK-HNIVHRDLKPE 150
Query: 66 NILLDERG---NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
NILL+ + +IK+ DFG+S + G A Y+APE + + YD + D
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------RGTYDEKCD 204
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
VWS G+ L L +G P+ K ++++L RV
Sbjct: 205 VWSAGVILYILLSGTPPFYG-KNEYDILKRV 234
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
S +I EL FD ++KR S E +I + Y+ + H ++HRD+KP
Sbjct: 94 SSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMHK-HNIVHRDLKPE 150
Query: 66 NILLDERG---NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
NILL+ + +IK+ DFG+S + G A Y+APE + + YD + D
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL------RGTYDEKCD 204
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
VWS G+ L L +G P+ K ++++L RV
Sbjct: 205 VWSAGVILYILLSGTPPFYG-KNEYDILKRV 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 125 IARQTARGMDYL-HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 184 GSILWMAPEVIRMQDSNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 125 IARQTARGMDYL-HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 184 GSILWMAPEVIRMQDSNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 113 IARQTARGMDYL-HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 172 GSILWMAPEVIRMQDSNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 5 SKESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
S +D ++ ME ++ FD + K H V E ++ + A+ Y H V+HRD+
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHR-HMVVHRDL 137
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KP N+LLD N K+ DFG+S + D + + G Y APE I P+ D
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE----VD 193
Query: 123 VWSLGITLVELATGEFPYKD 142
+WS G+ L L G P+ D
Sbjct: 194 IWSCGVILYALLCGTLPFDD 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 9 DVWICMELM--ATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ME+ FD ++ R S V + K LS LH H ++HRD+KP
Sbjct: 95 NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH----KHNIVHRDLKPE 150
Query: 66 NILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
N+LL+ + IK+ DFG+S + G A Y+APE + + YD + D
Sbjct: 151 NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL------RKKYDEKCD 204
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
VWS G+ L L G P+ + D E+L RV
Sbjct: 205 VWSCGVILYILLCGYPPF-GGQTDQEILKRV 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 9 DVWICMELM--ATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+ ++ ME+ FD ++ R S V + K LS LH H ++HRD+KP
Sbjct: 78 NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH----KHNIVHRDLKPE 133
Query: 66 NILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
N+LL+ + IK+ DFG+S + G A Y+APE + + YD + D
Sbjct: 134 NLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL------RKKYDEKCD 187
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
VWS G+ L L G P+ + D E+L RV
Sbjct: 188 VWSCGVILYILLCGYPPF-GGQTDQEILKRV 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 5 SKESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
S +D ++ ME ++ FD + K H V E ++ + A+ Y H V+HRD+
Sbjct: 81 STPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHR-HMVVHRDL 137
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KP N+LLD N K+ DFG+S + D + + G Y APE I P+ D
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE----VD 193
Query: 123 VWSLGITLVELATGEFPYKD 142
+WS G+ L L G P+ D
Sbjct: 194 IWSCGVILYALLCGTLPFDD 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 9 DVWICMELMA----------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
++W+ ME +A TC D E + ++AL +L ++ VI
Sbjct: 92 ELWVVMEYLAGGSLTDVVTETCMD-----------EGQIAAVCRECLQALEFL-HSNQVI 139
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
HR++K NILL G++KL DFG ++ + R+ G +MAPE + + Y
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-----TRKAY 194
Query: 118 DIRADVWSLGITLVELATGEFPY 140
+ D+WSLGI +E+ GE PY
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 91 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 147
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 148 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 203
Query: 138 FPY 140
P+
Sbjct: 204 LPW 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN 95
G+I L+ ++ LH L G+I+RD+K NILLD G++ L DFG+S V D R +
Sbjct: 165 VGEIVLA-LEHLHKL----GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 96 A-GCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK---DCKCDFEVLS 151
G YMAP+ + + +D D WSLG+ + EL TG P+ + E+
Sbjct: 220 FCGTIEYMAPDIVRGGD---SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 152 RVLNDAPP 159
R+L PP
Sbjct: 277 RILKSEPP 284
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
H ++HRD+KP N+LLD+ N+K+ DFG+S + D + G Y APE I
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 115 PDYDIRADVWSLGITLVELATGEFPYKD 142
P+ DVWS GI L + G P+ D
Sbjct: 187 PE----VDVWSCGIVLYVMLVGRLPFDD 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 93 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 149
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 138 FPY 140
P+
Sbjct: 206 LPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N C Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART 93
EP T V L +L + + +I+RD+KP N+LLD+ GN+++ D G++ L + +T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 94 KN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
K AG +MAPE + +YD D ++LG+TL E+ P++
Sbjct: 347 KGYAGTPGFMAPELL-----LGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART 93
EP T V L +L + + +I+RD+KP N+LLD+ GN+++ D G++ L + +T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 94 KN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
K AG +MAPE + +YD D ++LG+TL E+ P++
Sbjct: 347 KGYAGTPGFMAPELL-----LGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART 93
EP T V L +L + + +I+RD+KP N+LLD+ GN+++ D G++ L + +T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 94 KN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
K AG +MAPE + +YD D ++LG+TL E+ P++
Sbjct: 347 KGYAGTPGFMAPELL-----LGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 18/157 (11%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ + +G+IHRDVKP+N
Sbjct: 92 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPAN 146
Query: 67 ILLDERGNIKLCDFGISGRLVDS-KARTKNA---GCAAYMAPERIEPPNPQKPDYDIRAD 122
I++ +K+ DFGI+ + DS + T+ A G A Y++PE+ + D R+D
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-----RGDSVDARSD 201
Query: 123 VWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPP 159
V+SLG L E+ TGE P+ D V D P
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIP 238
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART 93
EP T V L +L + + +I+RD+KP N+LLD+ GN+++ D G++ L + +T
Sbjct: 288 EPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 94 KN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
K AG +MAPE + +YD D ++LG+TL E+ P++
Sbjct: 347 KGYAGTPGFMAPELL-----LGEEYDFSVDYFALGVTLYEMIAARGPFR 390
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCD 79
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ D
Sbjct: 92 LFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISD 148
Query: 80 FGISGRL-VDSKARTKN--AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
FG++ +++ R N G Y+APE ++ ++ + DVWS GI L + G
Sbjct: 149 FGLATVFRYNNRERLLNKMXGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAG 204
Query: 137 EFPY 140
E P+
Sbjct: 205 ELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCD 79
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ D
Sbjct: 91 LFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISD 147
Query: 80 FGISGRL-VDSKARTKN--AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
FG++ +++ R N G Y+APE ++ ++ + DVWS GI L + G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAG 203
Query: 137 EFPY 140
E P+
Sbjct: 204 ELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCD 79
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ D
Sbjct: 91 LFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISD 147
Query: 80 FGISGRL-VDSKARTKN--AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
FG++ +++ R N G Y+APE ++ ++ + DVWS GI L + G
Sbjct: 148 FGLATVFRYNNRERLLNKMXGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAG 203
Query: 137 EFPY 140
E P+
Sbjct: 204 ELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKN--AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N G Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
FDR+ + +PEP + + + YL G+ HRD+KP N+LLDER N+K+ DF
Sbjct: 92 FDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDF 148
Query: 81 GISGRL-VDSKARTKN--AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
G++ +++ R N G Y+APE ++ ++ + DVWS GI L + GE
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLK----RREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 138 FPY 140
P+
Sbjct: 205 LPW 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 24 LLKRLHVSVPEPICGK---ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDF 80
L K LHV + + I T + + YL +IHRD+K +NI L E +K+ DF
Sbjct: 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYL-HAKNIIHRDMKSNNIFLHEGLTVKIGDF 176
Query: 81 GIS---GRLVDSKARTKNAGCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G++ R S+ + G +MAPE R++ NP + ++DV+S GI L EL T
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP----FSFQSDVYSYGIVLYELMT 232
Query: 136 GEFPY 140
GE PY
Sbjct: 233 GELPY 237
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 5 SKESDVWICMELMA--TCFDRLLK--RLHVSVPEPICGKITLSTVKALHYLKETHGVIHR 60
S SD+++ ME ++ FD + K RL + +I LS V H H V+HR
Sbjct: 86 STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI-LSGVDYCH----RHMVVHR 140
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KP N+LLD N K+ DFG+S + D + + G Y APE I P+
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE---- 196
Query: 121 ADVWSLGITLVELATGEFPYKD 142
D+WS G+ L L G P+ D
Sbjct: 197 VDIWSSGVILYALLCGTLPFDD 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 18/138 (13%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ + +G+IHRDVKP+N
Sbjct: 92 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-NGIIHRDVKPAN 146
Query: 67 ILLDERGNIKLCDFGISGRLVDS-KARTKNA---GCAAYMAPERIEPPNPQKPDYDIRAD 122
I++ +K+ DFGI+ + DS + T+ A G A Y++PE+ + D R+D
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-----RGDSVDARSD 201
Query: 123 VWSLGITLVELATGEFPY 140
V+SLG L E+ TGE P+
Sbjct: 202 VYSLGCVLYEVLTGEPPF 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ +G+IHRDVKP+N
Sbjct: 92 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNF-SHQNGIIHRDVKPAN 146
Query: 67 ILLDERGNIKLCDFGISGRLVDSKARTKNA----GCAAYMAPERIEPPNPQKPDYDIRAD 122
IL+ +K+ DFGI+ + DS G A Y++PE+ + D R+D
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA-----RGDSVDARSD 201
Query: 123 VWSLGITLVELATGEFPY 140
V+SLG L E+ TGE P+
Sbjct: 202 VYSLGCVLYEVLTGEPPF 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 114 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 173 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 18/138 (13%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ +G+IHRDVKP+N
Sbjct: 92 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNF-SHQNGIIHRDVKPAN 146
Query: 67 ILLDERGNIKLCDFGISGRLVDS-KARTKNA---GCAAYMAPERIEPPNPQKPDYDIRAD 122
I++ +K+ DFGI+ + DS + T+ A G A Y++PE+ + D R+D
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-----RGDSVDARSD 201
Query: 123 VWSLGITLVELATGEFPY 140
V+SLG L E+ TGE P+
Sbjct: 202 VYSLGCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 18/138 (13%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ +G+IHRDVKP+N
Sbjct: 92 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNF-SHQNGIIHRDVKPAN 146
Query: 67 ILLDERGNIKLCDFGISGRLVDS-KARTKNA---GCAAYMAPERIEPPNPQKPDYDIRAD 122
I++ +K+ DFGI+ + DS + T+ A G A Y++PE+ + D R+D
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA-----RGDSVDARSD 201
Query: 123 VWSLGITLVELATGEFPY 140
V+SLG L E+ TGE P+
Sbjct: 202 VYSLGCVLYEVLTGEPPF 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 129 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 188 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 137 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 196 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 114 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 173 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 109 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 168 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 137 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 196 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 136 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 195 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 31 SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDE---RGNIKLCDFGISGRLV 87
++ E ++ + AL Y H V+H+D+KP NIL + IK+ DFG++
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 88 DSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDF 147
+ T AG A YMAPE K D + D+WS G+ + L TG P+ +
Sbjct: 179 SDEHSTNAAGTALYMAPEVF------KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE- 231
Query: 148 EVLSRVL----NDAPPCLPNDPLFGRTIKASIAKDNGR 181
EV + N A C P P +K + KD R
Sbjct: 232 EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPER 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 109 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 168 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISG 84
L R P P+ AL YL + +I+RD+KP NILLD+ G+IK+ DFG +
Sbjct: 96 LLRKSQRFPNPVAKFYAAEVCLALEYL-HSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
Query: 85 RLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCK 144
+ D G Y+APE + KP Y+ D WS GI + E+ G P+ D
Sbjct: 155 YVPDVTYXL--CGTPDYIAPEVVS----TKP-YNKSIDWWSFGILIYEMLAGYTPFYDSN 207
Query: 145 CDFEVLSRVLNDAPPCLPNDPLFGRTIKASIAK 177
+ ++LN A P P F +K +++
Sbjct: 208 T-MKTYEKILN-AELRFP--PFFNEDVKDLLSR 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 24 LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS 83
LL + +PE + V A+ + + H +HRD+KP NIL+D G+I+L DFG
Sbjct: 164 LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSC 222
Query: 84 GRLV-DSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+L+ D ++ A G Y++PE ++ K Y D WSLG+ + E+ GE P+
Sbjct: 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
S +++ +LM FD L ++ V++ E I S ++A+ +L + ++HRD+KP
Sbjct: 173 SFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFL-HANNIVHRDLKPE 229
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIE-PPNPQKPDYDIRADVW 124
NILLD+ I+L DFG S L + + G Y+APE ++ + P Y D+W
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
Query: 125 SLGITLVELATGEFPY 140
+ G+ L L G P+
Sbjct: 290 ACGVILFTLLAGSPPF 305
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 111 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 170 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS---GRLVDSKARTKNA 96
I T + + YL +IHRD+K +NI L E +K+ DFG++ R S + +
Sbjct: 109 IARQTAQGMDYL-HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 97 GCAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
G +MAPE R++ NP Y ++DV++ GI L EL TG+ PY + +++ V
Sbjct: 168 GSILWMAPEVIRMQDKNP----YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 18/138 (13%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHRDVKPSN 66
+I ME + D + R V P+ K + + +AL++ +G+IHRDVKP+N
Sbjct: 109 YIVMEYV----DGVTLRDIVHTEGPMTPKRAIEVIADACQALNF-SHQNGIIHRDVKPAN 163
Query: 67 ILLDERGNIKLCDFGISGRLVDS-KARTKNA---GCAAYMAPERIEPPNPQKPDYDIRAD 122
I++ +K+ DFGI+ + DS + T+ A G A Y++PE+ + D R+D
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ-----ARGDSVDARSD 218
Query: 123 VWSLGITLVELATGEFPY 140
V+SLG L E+ TGE P+
Sbjct: 219 VYSLGCVLYEVLTGEPPF 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIK 76
FD ++ R S E +I + + Y+ + ++HRD+KP N+LL+ + NI+
Sbjct: 136 LFDEIISRKRFS--EVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 192
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
+ DFG+S SK G A Y+APE + YD + DVWS G+ L L +G
Sbjct: 193 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT------YDEKCDVWSTGVILYILLSG 246
Query: 137 EFPYKDCKCDFEVLSRV 153
P+ ++++L +V
Sbjct: 247 CPPFNGAN-EYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIK 76
FD ++ R S E +I + + Y+ + ++HRD+KP N+LL+ + NI+
Sbjct: 137 LFDEIISRKRFS--EVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 193
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
+ DFG+S SK G A Y+APE + YD + DVWS G+ L L +G
Sbjct: 194 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT------YDEKCDVWSTGVILYILLSG 247
Query: 137 EFPYKDCKCDFEVLSRV 153
P+ ++++L +V
Sbjct: 248 CPPFNGAN-EYDILKKV 263
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIK 76
FD ++ R S E +I + + Y+ + ++HRD+KP N+LL+ + NI+
Sbjct: 113 LFDEIISRKRFS--EVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 169
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
+ DFG+S SK G A Y+APE + YD + DVWS G+ L L +G
Sbjct: 170 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT------YDEKCDVWSTGVILYILLSG 223
Query: 137 EFPYKDCKCDFEVLSRV 153
P+ ++++L +V
Sbjct: 224 CPPFNGAN-EYDILKKV 239
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 4 QSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+SK+ + + FD +++R +S E + + A+ Y H ++HRD+K
Sbjct: 84 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE--ARRFFQQIISAVEYCHR-HKIVHRDLK 140
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+LLDE N+K+ DFG+S + D + G Y APE I P+ DV
Sbjct: 141 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE----VDV 196
Query: 124 WSLGITLVELATGEFPYKD 142
WS G+ L + P+ D
Sbjct: 197 WSCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 4 QSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+SK+ + + FD +++R +S E + + A+ Y H ++HRD+K
Sbjct: 83 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE--ARRFFQQIISAVEYCHR-HKIVHRDLK 139
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+LLDE N+K+ DFG+S + D + G Y APE I P+ DV
Sbjct: 140 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE----VDV 195
Query: 124 WSLGITLVELATGEFPYKD 142
WS G+ L + P+ D
Sbjct: 196 WSCGVILYVMLCRRLPFDD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 4 QSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+SK+ + + FD +++R +S E + + A+ Y H ++HRD+K
Sbjct: 78 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE--ARRFFQQIISAVEYCHR-HKIVHRDLK 134
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+LLDE N+K+ DFG+S + D + G Y APE I P+ DV
Sbjct: 135 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE----VDV 190
Query: 124 WSLGITLVELATGEFPYKD 142
WS G+ L + P+ D
Sbjct: 191 WSCGVILYVMLCRRLPFDD 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDE-RGNIKLCDFGISGRLVDSKAR 92
E G T ++ L YL + ++HRD+K N+L++ G +K+ DFG S RL
Sbjct: 121 EQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 93 TKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
T+ G YMAPE I+ P+ Y AD+WSLG T++E+ATG+ P+
Sbjct: 180 TETFTGTLQYMAPEIIDK-GPR--GYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 4 QSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+SK+ + + FD +++R +S E + + A+ Y H ++HRD+K
Sbjct: 74 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE--ARRFFQQIISAVEYCHR-HKIVHRDLK 130
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+LLDE N+K+ DFG+S + D + G Y APE I P+ DV
Sbjct: 131 PENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE----VDV 186
Query: 124 WSLGITLVELATGEFPYKD 142
WS G+ L + P+ D
Sbjct: 187 WSCGVILYVMLCRRLPFDD 205
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDE-RGNIKLCDFGISGRLVDSKAR 92
E G T ++ L YL + ++HRD+K N+L++ G +K+ DFG S RL
Sbjct: 107 EQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 165
Query: 93 TKN-AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
T+ G YMAPE I+ P+ Y AD+WSLG T++E+ATG+ P+
Sbjct: 166 TETFTGTLQYMAPEIIDK-GPR--GYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIK 76
FD ++ R S E +I + + Y+ + ++HRD+KP N+LL+ + NI+
Sbjct: 119 LFDEIISRKRFS--EVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIR 175
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
+ DFG+S SK G A Y+APE + YD + DVWS G+ L L +G
Sbjct: 176 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT------YDEKCDVWSTGVILYILLSG 229
Query: 137 EFPYKDCKCDFEVLSRV 153
P+ ++++L +V
Sbjct: 230 CPPFNGAN-EYDILKKV 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
+S++ + + M T + ++K + + L T++ L YL + H ++HRD+KP+N
Sbjct: 84 KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ-HWILHRDLKPNN 142
Query: 67 ILLDERGNIKLCDFGISGRLVD-SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+LLDE G +KL DFG++ ++A Y APE + Y + D+W+
Sbjct: 143 LLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM----YGVGVDMWA 198
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRVL 154
+G L EL P+ D + L+R+
Sbjct: 199 VGCILAELLL-RVPFLPGDSDLDQLTRIF 226
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 10 VWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
+++ EL + + S+PE T+ AL +L + G++H DVKP+NI L
Sbjct: 132 LYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL-HSQGLVHLDVKPANIFL 190
Query: 70 DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGIT 129
RG KL DFG+ L + A G YMAPE ++ Y ADV+SLG+T
Sbjct: 191 GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQ------GSYGTAADVFSLGLT 244
Query: 130 LVELA 134
++E+A
Sbjct: 245 ILEVA 249
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 20 CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIK 76
FD ++ R S E +I + + Y + ++HRD+KP N+LL+ + NI+
Sbjct: 113 LFDEIISRKRFS--EVDAARIIRQVLSGITYXHKNK-IVHRDLKPENLLLESKSKDANIR 169
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
+ DFG+S SK G A Y+APE + YD + DVWS G+ L L +G
Sbjct: 170 IIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT------YDEKCDVWSTGVILYILLSG 223
Query: 137 EFPYKDCKCDFEVLSRV 153
P+ ++++L +V
Sbjct: 224 CPPFNGAN-EYDILKKV 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT AG Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLAGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 258 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 318 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 261 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 321 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 141
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S + G Y APE + P+ DVW
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE----VDVW 197
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 198 SLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + + ++HRD+K
Sbjct: 86 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKY-IVHRDLKA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 198
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 199 SLGVILYTLVSGSLPF-DGQNLKELRERVL 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME M F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 118 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 178 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 119 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 179 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 120 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 180 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 24 LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS 83
LL + +PE + V A+ + + H +HRD+KP N+LLD G+I+L DFG
Sbjct: 180 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH-YVHRDIKPDNVLLDVNGHIRLADFGSC 238
Query: 84 GRLVD--SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
++ D + + G Y++PE ++ Y D WSLG+ + E+ GE P+
Sbjct: 239 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME M F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 24 LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS 83
LL + +PE + V A+ + + H +HRD+KP N+LLD G+I+L DFG
Sbjct: 164 LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH-YVHRDIKPDNVLLDVNGHIRLADFGSC 222
Query: 84 GRLVD--SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
++ D + + G Y++PE ++ Y D WSLG+ + E+ GE P+
Sbjct: 223 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 141
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE----VDVW 197
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 198 SLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 141
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 197
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 198 SLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGI---SGRLVDSKARTKN 95
KI +++L E H IHRD+K +NILLDE K+ DFG+ S + + ++
Sbjct: 137 KIAQGAANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
G AYMAPE + + + ++D++S G+ L+E+ TG
Sbjct: 196 VGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 230
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
+++RD+KP NILLD+ G+I++ D G++ + + + G YMAPE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV-----KNER 361
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCKCDF--EVLSRVLNDAP 158
Y D W+LG L E+ G+ P++ K E + R++ + P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 141
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 197
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 198 SLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 141
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 197
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 198 SLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 2 SPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIH 59
S +SK ++I ME T + KR + + + ++ K + Y+ + +IH
Sbjct: 101 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI-HSKKLIH 159
Query: 60 RDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDI 119
RD+KPSNI L + +K+ DFG+ L + RT++ G YM+PE+I DY
Sbjct: 160 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS-----QDYGK 214
Query: 120 RADVWSLGITLVEL 133
D+++LG+ L EL
Sbjct: 215 EVDLYALGLILAEL 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 158
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 159 LNTTSDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 213
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 214 WSVGCILAEMLSNRPIFPGK 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 17/131 (12%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRL--------V 87
++ AL +L T G+ HRD+KP NIL + + +K+CDF + + +
Sbjct: 115 RVVRDVAAALDFL-HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPI 173
Query: 88 DSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY-----KD 142
+ T G A YMAPE +E Q YD R D+WSLG+ L + +G P+ D
Sbjct: 174 TTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233
Query: 143 CKCDFEVLSRV 153
C D + RV
Sbjct: 234 CGWDRGEVCRV 244
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
+++RD+KP NILLD+ G+I++ D G++ + + + G YMAPE + +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV-----KNER 361
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCKCDF--EVLSRVLNDAP 158
Y D W+LG L E+ G+ P++ K E + R++ + P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 101 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 155
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+DE+G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 156 PENLLIDEQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 207
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 208 WWALGVLIYEMAAGYPPF 225
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 86 EKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE----VDVW 198
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 199 SLGVILYTLVSGSLPF-DGQNLKELRERVL 227
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 83 EKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKA 139
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 195
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 196 SLGVILYTLVSGSLPF-DGQNLKELRERVL 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGI---SGRLVDSKARTKN 95
KI +++L E H IHRD+K +NILLDE K+ DFG+ S + + +
Sbjct: 137 KIAQGAANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
G AYMAPE + + + ++D++S G+ L+E+ TG
Sbjct: 196 VGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLXGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 156
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 157 LNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 211
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 212 WSVGCILAEMLSNRPIFPGK 231
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 161 LNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 156
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 157 LNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 211
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 212 WSVGCILAEMLSNRPIFPGK 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 161 LNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E +++ ME + FD L+ H + E V A+ Y + ++HRD+K
Sbjct: 78 EKTLYLVMEYASGGEVFDYLVA--HGWMKEKEARAKFRQIVSAVQYCHQKF-IVHRDLKA 134
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+LLD NIK+ DFG S G Y APE + P+ DVW
Sbjct: 135 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE----VDVW 190
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
SLG+ L L +G P+ D + E+ RVL
Sbjct: 191 SLGVILYTLVSGSLPF-DGQNLKELRERVL 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQ 113
H V+HRD+KP+N+ LD + N+KL DFG++ L + K G YM+PE++
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM-----N 189
Query: 114 KPDYDIRADVWSLGITLVEL 133
+ Y+ ++D+WSLG L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
V A+ Y + ++HRD+K N+LLD NIK+ DFG S G Y AP
Sbjct: 123 VSAVQYCHQKF-IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAP 181
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVL 154
E + P+ DVWSLG+ L L +G P+ D + E+ RVL
Sbjct: 182 ELFQGKKYDGPE----VDVWSLGVILYTLVSGSLPF-DGQNLKELRERVL 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISG 84
L R VPE + IT T++A+++ + H IHRDVKP NIL+ + IKLCDFG +
Sbjct: 92 LDRYQRGVPEHLVKSITWQTLQAVNFCHK-HNCIHRDVKPENILITKHSVIKLCDFGFAR 150
Query: 85 RLVD-SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
L S Y +PE + P DVW++G EL +G
Sbjct: 151 LLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP----VDVWAIGCVFAELLSG 199
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL--DERGNIKLCDFGISGRLV---- 87
E + I ALHYL G+ HRD+KP N L ++ IKL DFG+S
Sbjct: 167 EKLISNIMRQIFSALHYL-HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN 225
Query: 88 -DSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCD 146
+ T AG ++APE + N Y + D WS G+ L L G P+ D
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTN---ESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-D 281
Query: 147 FEVLSRVLN 155
+ +S+VLN
Sbjct: 282 ADTISQVLN 290
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 108 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 164
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 165 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 219
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 220 WSVGCILAEMLSNRPIFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 156
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 157 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 211
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 212 WSVGCILAEMLSNRPIFPGK 231
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 158
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 159 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 213
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 214 WSVGCILAEMLSNRPIFPGK 233
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 87 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 141
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 142 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 199
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 200 DCWSLGVILFICLSGYPPFSE 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 102 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 158
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 159 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 213
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 214 WSVGCILAEMLSNRPIFPGK 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGI---SGRLVDSKARTKN 95
KI +++L E H IHRD+K +NILLDE K+ DFG+ S + +
Sbjct: 131 KIAQGAANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
G AYMAPE + + + ++D++S G+ L+E+ TG
Sbjct: 190 VGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 105 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 161
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 162 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 216
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 217 WSVGCILAEMLSNRPIFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 106 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 162
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 163 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 217
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 218 WSVGCILAEMLSNRPIFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 97 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 153
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 154 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 208
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 209 WSVGCILAEMLSNRPIFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 161 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 142
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 200
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 201 DCWSLGVILFICLSGYPPFSE 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 10 VWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++ MEL+ F+R+ K+ H S E I V A+ ++ + GV+HRD+KP N+
Sbjct: 81 TFLVMELLNGGELFERIKKKKHFSETE--ASYIMRKLVSAVSHMHDV-GVVHRDLKPENL 137
Query: 68 LL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAA--YMAPERIEPPNPQKPDYDIRAD 122
L DE N IK+ DFG + RL + C Y APE + + YD D
Sbjct: 138 LFTDENDNLEIKIIDFGFA-RLKPPDNQPLKTPCFTLHYAAPELL-----NQNGYDESCD 191
Query: 123 VWSLGITLVELATGEFPYKD------CKCDFEVLSRV 153
+WSLG+ L + +G+ P++ C E++ ++
Sbjct: 192 LWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 142
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 200
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 201 DCWSLGVILFICLSGYPPFSE 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 88 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 142
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 200
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 201 DCWSLGVILFICLSGYPPFSE 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 98 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 154
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 155 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 209
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 210 WSVGCILAEMLSNRPIFPGK 229
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNI---KLCDFGISGRL--------VD 88
+ AL +L G+ HRD+KP NIL + + K+CDFG+ + +
Sbjct: 116 VVQDVASALDFL-HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 89 SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY-----KDC 143
+ G A YMAPE +E + + YD R D+WSLG+ L L +G P+ DC
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 144 KCD 146
D
Sbjct: 235 GWD 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 98 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 154
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 155 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 209
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 210 WSVGCILAEMLSNRPIFPGK 229
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 94 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 148
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 149 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 206
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 207 DCWSLGVILFICLSGYPPFSE 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 161 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 156
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 157 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 211
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 212 WSVGCILAEMLSNRPIFPGK 231
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ V+HRD+KPSN+L
Sbjct: 120 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYIHSA-NVLHRDLKPSNLL 176
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 177 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 231
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 232 WSVGCILAEMLSNRPIFPGK 251
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPNPQ 113
H V+HRD+KP+N+ LD + N+KL DFG++ L D+ G YM+PE++
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM-----N 189
Query: 114 KPDYDIRADVWSLGITLVEL 133
+ Y+ ++D+WSLG L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 115 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 174 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 118 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 177 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 115 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 174 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 227 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 281
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 282 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 339
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 340 DCWSLGVILFICLSGYPPFSE 360
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERG---NIKLCDFGISGRLV-DSKARTK 94
K LS + LH H ++HRD+KP NILL+ + NIK+ DFG+S D K R +
Sbjct: 153 KQILSGICYLH----KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR 208
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
G A Y+APE + K Y+ + DVWS G+ + L G P+
Sbjct: 209 -LGTAYYIAPEVL------KKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIEPPNPQ 113
H V+HRD+KP+N+ LD + N+KL DFG++ L + K G YM+PE++
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM-----N 189
Query: 114 KPDYDIRADVWSLGITLVEL 133
+ Y+ ++D+WSLG L EL
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNI-KLCDFGISGRLVDSKARTKNAGCAAYMA 103
V LH + + +IHRD+KP N+LL G + K+CDFG + + T N G AA+MA
Sbjct: 116 VAYLHSM-QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMA 172
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKC-DFEVLSRVLNDA-PPCL 161
PE E N Y + DV+S GI L E+ T P+ + F ++ V N PP +
Sbjct: 173 PEVFEGSN-----YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 227
Query: 162 PNDP 165
N P
Sbjct: 228 KNLP 231
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 9 DVWICMELM--ATCFDRLL--KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
D +I +ELM FD+++ KRL E C + A+ YL E +G+IHRD+KP
Sbjct: 213 DYYIVLELMEGGELFDKVVGNKRLK----EATCKLYFYQMLLAVQYLHE-NGIIHRDLKP 267
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N+LL +E IK+ DFG S L ++ G Y+APE + + Y+
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL--VSVGTAGYNRAV 325
Query: 122 DVWSLGITLVELATGEFPYKD 142
D WSLG+ L +G P+ +
Sbjct: 326 DCWSLGVILFICLSGYPPFSE 346
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNI-KLCDFGISGRLVDSKARTKNAGCAAYMA 103
V LH + + +IHRD+KP N+LL G + K+CDFG + + T N G AA+MA
Sbjct: 115 VAYLHSM-QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI--QTHMTNNKGSAAWMA 171
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKC-DFEVLSRVLNDA-PPCL 161
PE E N Y + DV+S GI L E+ T P+ + F ++ V N PP +
Sbjct: 172 PEVFEGSN-----YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 226
Query: 162 PNDP 165
N P
Sbjct: 227 KNLP 230
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNA--G 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N+ G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSASK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 115 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 174 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 115 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 174 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 120 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 179 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMA 103
V AL YL + V++RD+K N++LD+ G+IK+ DFG+ + A K G Y+A
Sbjct: 115 VSALEYL-HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY--KDCKCDFEVL 150
PE +E DY D W LG+ + E+ G P+ +D + FE++
Sbjct: 174 PEVLE-----DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLIIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIIISKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNA--G 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK NA G
Sbjct: 136 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 195 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + ++A G P+
Sbjct: 221 WWALGVLIYQMAAGYPPF 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 34 EPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART 93
EP AL YL + +++RD+KP NILLD +G+I L DFG+ ++ + T
Sbjct: 138 EPRARFYAAEIASALGYL-HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT 196
Query: 94 KNA-GCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSR 152
G Y+APE + K YD D W LG L E+ G P+ + E+
Sbjct: 197 STFCGTPEYLAPEVL-----HKQPYDRTVDWWCLGAVLYEMLYGLPPFY-SRNTAEMYDN 250
Query: 153 VLNDAPPCLPN 163
+LN PN
Sbjct: 251 ILNKPLQLKPN 261
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 91
VPE T V AL + + G+IHRDVKP N+LLD+ G++KL DFG ++ ++
Sbjct: 171 VPEKWAKFYTAEVVLALDAI-HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 92 R--TKNAGCAAYMAPERIEPPNPQKPD--YDIRADVWSLGITLVELATGEFPY 140
G Y++PE ++ Q D Y D WS+G+ L E+ G+ P+
Sbjct: 230 VHCDTAVGTPDYISPEVLK---SQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPE 105
AL+YL E G+I+RD+K N+LLD G+IKL D+G+ L + G Y+APE
Sbjct: 165 ALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + DY D W+LG+ + E+ G P+
Sbjct: 224 IL-----RGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPE 105
AL+YL E G+I+RD+K N+LLD G+IKL D+G+ L + G Y+APE
Sbjct: 133 ALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + DY D W+LG+ + E+ G P+
Sbjct: 192 IL-----RGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSAXK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G IK+ DFG++ R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLMIDQQGYIKVTDFGLAKRV---KGRTWXLCGTPEYLAPEII-----LSKGYNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPE 105
AL+YL E G+I+RD+K N+LLD G+IKL D+G+ L + G Y+APE
Sbjct: 118 ALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + DY D W+LG+ + E+ G P+
Sbjct: 177 IL-----RGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +E+ C R L LH +V EP T++ + YL VIHRD+K N
Sbjct: 117 VYVVLEI---CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIHRDLKLGN 172
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L++ ++K+ DFG++ ++ D + + G Y+APE + K + D+WS
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL-----CKKGHSFEVDIWS 227
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
LG L L G+ P+ + C E R+
Sbjct: 228 LGCILYTLLVGKPPF-ETSCLKETYIRI 254
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 29 HVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-V 87
+ VPE T V AL + + G IHRDVKP N+LLD+ G++KL DFG ++
Sbjct: 162 NYDVPEKWARFYTAEVVLALDAI-HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220
Query: 88 DSKARTKNA-GCAAYMAPERIEPPNPQKPD--YDIRADVWSLGITLVELATGEFPY 140
+ R A G Y++PE ++ Q D Y D WS+G+ L E+ G+ P+
Sbjct: 221 EGMVRCDTAVGTPDYISPEVLK---SQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 100 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 154
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 155 PENLLIDQQGYIQVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSKG-----YNKAVD 206
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 207 WWALGVLIYEMAAGYPPF 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 21 FDRLLKRLHVSVPEP-ICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCD 79
FD ++ + +S E + + +S V +H + G HRD+KP N+L DE +KL D
Sbjct: 96 FDYIISQDRLSEEETRVVFRQIVSAVAYVH----SQGYAHRDLKPENLLFDEYHKLKLID 151
Query: 80 FGISGRLVDSKARTKNAGCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
FG+ + +K C AY APE I+ K ADVWS+GI L L G
Sbjct: 152 FGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG----KSYLGSEADVWSMGILLYVLMCGF 207
Query: 138 FPYKD 142
P+ D
Sbjct: 208 LPFDD 212
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 135 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 189
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 241
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 242 WWALGVLIYEMAAGYPPF 259
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +E+ C R L LH +V EP T++ + YL VIHRD+K N
Sbjct: 117 VYVVLEI---CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIHRDLKLGN 172
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L++ ++K+ DFG++ ++ D + + G Y+APE + K + D+WS
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL-----CKKGHSFEVDIWS 227
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
LG L L G+ P+ + C E R+
Sbjct: 228 LGCILYTLLVGKPPF-ETSCLKETYIRI 254
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +E+ C R L LH +V EP T++ + YL VIHRD+K N
Sbjct: 117 VYVVLEI---CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIHRDLKLGN 172
Query: 67 ILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L++ ++K+ DFG++ ++ R K+ G Y+APE + K + D+WS
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL-----CKKGHSFEVDIWS 227
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
LG L L G+ P+ + C E R+
Sbjct: 228 LGCILYTLLVGKPPF-ETSCLKETYIRI 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKCQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 161 LNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR-LVDSKARTKNAGCAAYMAPE 105
AL+YL E G+I+RD+K N+LLD G+IKL D+G+ L + G Y+APE
Sbjct: 122 ALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + DY D W+LG+ + E+ G P+
Sbjct: 181 IL-----RGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
VPE T V AL + + G IHRDVKP N+LLD+ G++KL DFG ++ +
Sbjct: 170 VPEKWARFYTAEVVLALDAI-HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 91 ARTKNA-GCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
R A G Y++PE ++ Y D WS+G+ L E+ G+ P+
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGY-YGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + P +I L T + LH L +I+RD+K
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 189
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 241
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 242 WWALGVLIYEMAAGYPPF 259
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
VPE T V AL + + G IHRDVKP N+LLD+ G++KL DFG ++ +
Sbjct: 170 VPEKWARFYTAEVVLALDAI-HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 91 ARTKNA-GCAAYMAPERIEPPNPQKPD--YDIRADVWSLGITLVELATGEFPY 140
R A G Y++PE ++ Q D Y D WS+G+ L E+ G+ P+
Sbjct: 229 VRCDTAVGTPDYISPEVLK---SQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + S P +I L T + LH L +I+RD+K
Sbjct: 107 SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 161
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 213
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 214 WWALGVLIYEMAAGYPPF 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + P +I L T + LH L +I+RD+K
Sbjct: 109 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 163
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 164 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 215
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 216 WWALGVLIYEMAAGYPPF 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSL----DLIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G IK+ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +E+ C R L LH +V EP T++ + YL VIHRD+K N
Sbjct: 101 VYVVLEI---CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR-VIHRDLKLGN 156
Query: 67 ILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L++ ++K+ DFG++ ++ R K+ G Y+APE + K + D+WS
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL-----CKKGHSFEVDIWS 211
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
LG L L G+ P+ + C E R+
Sbjct: 212 LGCILYTLLVGKPPF-ETSCLKETYIRI 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 135 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 189
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+L+D++G I++ DFG + R+ A G Y+APE I Y+ D
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEIILSKG-----YNKAVDW 242
Query: 124 WSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT +G Y+ PE IE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMIEGRM----- 183
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
++++W+ MA + D + + E I +KAL Y+ G +HR VK
Sbjct: 98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKA 156
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTK--------NAGCAAYMAPERIEPPNPQKPD 116
S+IL+ G + L + ++ R + + +++PE ++ N Q
Sbjct: 157 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ-NLQ--G 213
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
YD ++D++S+GIT ELA G P+KD ++L LN PCL
Sbjct: 214 YDAKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKLNGTVPCL 257
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 44 TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYM 102
T + LH L +I+RD+KP N+L+D++G IK+ DFG + R+ K RT G Y+
Sbjct: 154 TFEYLHSL----DLIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLCGTPEYL 206
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
APE I Y+ D W+LG+ + E+A G P+
Sbjct: 207 APEIILSKG-----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
++++W+ MA + D + + E I +KAL Y+ G +HR VK
Sbjct: 82 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKA 140
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTK--------NAGCAAYMAPERIEPPNPQKPD 116
S+IL+ G + L + ++ R + + +++PE ++ N Q
Sbjct: 141 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ-NLQ--G 197
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCL 161
YD ++D++S+GIT ELA G P+KD ++L LN PCL
Sbjct: 198 YDAKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKLNGTVPCL 241
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 104 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 160
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + + Y APE + Y D+
Sbjct: 161 LNTTCDLKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAPEIML----NSKGYTKSIDI 215
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 216 WSVGCILAEMLSNRPIFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 105 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 161
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + + Y APE + Y D+
Sbjct: 162 LNTTCDLKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAPEIML----NSKGYTKSIDI 216
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 217 WSVGCILAEMLSNRPIFPGK 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEXIE-----GRX 187
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT+ G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTELCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG--VIHRDVKPS 65
++V+I ELM T R++ +S I + L +K HG VIHRD+KPS
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLS-----DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPS 141
Query: 66 NILLDERGNIKLCDFGISGRLVDSKA------RTKNAGCAAYMAPERIEPPNPQ--KPDY 117
N+L++ ++K+CDFG++ R++D A + +G Y+A P Y
Sbjct: 142 NLLINSNCDLKVCDFGLA-RIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKY 200
Query: 118 DIRADVWSLGITLVELATGE--FPYKDCK 144
DVWS G L EL FP +D +
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNA--G 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N+ G
Sbjct: 135 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 194 TAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFR 232
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
V++RD+KP+NILLDE G++++ D G++ K + G YMAPE ++ +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ----KGVA 367
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCK 144
YD AD +SLG L +L G P++ K
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
V++RD+KP+NILLDE G++++ D G++ K + G YMAPE ++ +
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ----KGVA 366
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCK 144
YD AD +SLG L +L G P++ K
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSPFRQHK 394
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+AP I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPAIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
V++RD+KP+NILLDE G++++ D G++ K + G YMAPE ++ +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ----KGVA 367
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCK 144
YD AD +SLG L +L G P++ K
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
V++RD+KP+NILLDE G++++ D G++ K + G YMAPE ++ +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ----KGVA 367
Query: 117 YDIRADVWSLGITLVELATGEFPYKDCK 144
YD AD +SLG L +L G P++ K
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGI---SGRLVDSKARTKN 95
KI +++L E H IHRD+K +NILLDE K+ DFG+ S + ++
Sbjct: 128 KIAQGAANGINFLHENHH-IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
G AY APE + + + ++D++S G+ L+E+ TG
Sbjct: 187 VGTTAYXAPEAL------RGEITPKSDIYSFGVVLLEIITG 221
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL----DERGNIKLCDFGISGRLV 87
+PE + V +++L+E +G++HR++KP NI+ D + KL DFG + L
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 88 DSKARTKNAGCAAYMAP---ERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC- 143
D + G Y+ P ER + Y D+WS+G+T ATG P++
Sbjct: 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
Query: 144 --KCDFEVLSRVLNDAP 158
+ + EV+ +++ P
Sbjct: 228 GPRRNKEVMYKIITGKP 244
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNA--G 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N+ G
Sbjct: 139 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 198 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 129 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 178
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y++
Sbjct: 179 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNMT 232
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVLNDAPPC 160
D+WS+G + EL TG FP D + + R L PP
Sbjct: 233 VDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMR-LTGTPPA 273
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV++ LM +LLK H+S + IC ++ L Y+ V+HRD+KPSN+L
Sbjct: 120 DVYLVTHLMGADLYKLLKTQHLS-NDHIC-YFLYQILRGLKYIHSA-NVLHRDLKPSNLL 176
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 177 LNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 231
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 232 WSVGCILAEMLSNRPIFPGK 251
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIE-----GRM 208
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 135 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 194 TAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFR 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 16/138 (11%)
Query: 11 WICMELMA--TCFDRLLKR-LHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++ M+L++ FDR+L+R ++ + + LS VK LH +G++HRD+KP N+
Sbjct: 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH----ENGIVHRDLKPENL 137
Query: 68 LL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L +E I + DFG+S ++ + + G Y+APE + QKP Y D W
Sbjct: 138 LYLTPEENSKIMITDFGLS-KMEQNGIMSTACGTPGYVAPEVL----AQKP-YSKAVDCW 191
Query: 125 SLGITLVELATGEFPYKD 142
S+G+ L G P+ +
Sbjct: 192 SIGVITYILLCGYPPFYE 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+D ++ M M T +L+K H + E + +K L Y+ G+IHRD+KP N+
Sbjct: 103 TDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYI-HAAGIIHRDLKPGNL 159
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
++E +K+ DFG++ R DS+ Y APE I N + Y D+WS+G
Sbjct: 160 AVNEDCELKILDFGLA-RQADSEM-XGXVVTRWYRAPEVI--LNWMR--YTQTVDIWSVG 213
Query: 128 ITLVELATGEFPYK 141
+ E+ TG+ +K
Sbjct: 214 CIMAEMITGKTLFK 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 136 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 195 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 120 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 179 TAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFR 217
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G I++ DFG++ R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLMIDQQGYIQVTDFGLAKRV---KGRTWXLCGTPEYLAPEII-----LSKGYNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+++ M+L++ FDR++++ + E ++ + A+ YL + G++HRD+KP N+
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENL 147
Query: 68 L---LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L LDE I + DFG+S + G Y+APE + QKP Y D W
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL----AQKP-YSKAVDCW 202
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLN 155
S+G+ L G P+ D + D ++ ++L
Sbjct: 203 SIGVIAYILLCGYPPFYD-ENDAKLFEQILK 232
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 187
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 136 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 195 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 233
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 187
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 136 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 195 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 199
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 31 SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL----DERGNIKLCDFGISGRL 86
+PE + V +++L+E +G++HR++KP NI+ D + KL DFG + L
Sbjct: 108 GLPESEFLIVLRDVVGGMNHLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
Query: 87 VDSKARTKNAGCAAYMAP---ERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
D + G Y+ P ER + Y D+WS+G+T ATG P++
Sbjct: 167 EDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
Query: 144 ---KCDFEVLSRVLNDAP 158
+ + EV+ +++ P
Sbjct: 227 EGPRRNKEVMYKIITGKP 244
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 141 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 200 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 143 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 202 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 240
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTXLCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 114 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 173 TAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFR 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 115 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 174 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+++ M+L++ FDR++++ + E ++ + A+ YL + G++HRD+KP N+
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENL 147
Query: 68 L---LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L LDE I + DFG+S + G Y+APE + QKP Y D W
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL----AQKP-YSKAVDCW 202
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLN 155
S+G+ L G P+ D + D ++ ++L
Sbjct: 203 SIGVIAYILLCGYPPFYD-ENDAKLFEQILK 232
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 186
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 44 TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYM 102
T + LH L +I+RD+KP N+++D++G IK+ DFG + R+ K RT G Y+
Sbjct: 154 TFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYL 206
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
APE I Y+ D W+LG+ + E+A G P+
Sbjct: 207 APEIILSKG-----YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 181
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 139 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 198 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 236
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 113 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 172 TAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFR 210
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 138 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 197 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 44 TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYM 102
T + LH L +I+RD+KP N+++D++G IK+ DFG + R+ K RT G Y+
Sbjct: 153 TFEYLHSLD----LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLCGTPEYL 205
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
APE I Y+ D W+LG+ + E+A G P+
Sbjct: 206 APEIILSKG-----YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 51 LKETH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA--GCAAYMAPER 106
LK H ++HRD+K NI L + G ++L DFGI+ R+++S A G Y++PE
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIA-RVLNSTVELARACIGTPYYLSPEI 196
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPL 166
E KP Y+ ++D+W+LG L EL T + ++ VL + PP +
Sbjct: 197 CE----NKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSY 251
Query: 167 FGRTIKASIAKDNGR 181
R++ + + K N R
Sbjct: 252 DLRSLVSQLFKRNPR 266
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+++ M+L++ FDR++++ + E ++ + A+ YL + G++HRD+KP N+
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENL 147
Query: 68 L---LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L LDE I + DFG+S + G Y+APE + QKP Y D W
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL----AQKP-YSKAVDCW 202
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLN 155
S+G+ L G P+ D + D ++ ++L
Sbjct: 203 SIGVIAYILLCGYPPFYD-ENDAKLFEQILK 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 29 HVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 88
H + EP+ I V A+ YL+ +IHRD+K NI++ E IKL DFG + L
Sbjct: 124 HPRLDEPLASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
Query: 89 SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFE 148
K G Y APE + + P+ ++ WSLG+TL L E P+ C+ E
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEM----WSLGVTLYTLVFEENPF----CELE 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKN--AG 97
T V AL YL G+IHRD+KP NILL+E +I++ DFG + L +SK N G
Sbjct: 116 TAEIVSALEYL-HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 98 CAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
A Y++PE + + K +D+W+LG + +L G P++
Sbjct: 175 TAQYVSPELLTEKSACK-----SSDLWALGCIIYQLVAGLPPFR 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 179
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRM----- 187
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+++D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLMIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRM----- 183
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+++ M+L++ FDR++++ + E ++ + A+ YL + G++HRD+KP N+
Sbjct: 91 LYLIMQLVSGGELFDRIVEKGFYT--ERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENL 147
Query: 68 L---LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L LDE I + DFG+S + G Y+APE + QKP Y D W
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL----AQKP-YSKAVDCW 202
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVLN 155
S+G+ L G P+ D + D ++ ++L
Sbjct: 203 SIGVIAYILLCGYPPFYD-ENDAKLFEQILK 232
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 40 ITLSTVKALHYLKETHG-VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AG 97
+ K ++YL + ++HRD+K N+L+D++ +K+CDFG+S +K AG
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 98 CAAYMAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+MAPE R EP N ++DV+S G+ L ELAT + P+
Sbjct: 202 TPEWMAPEVLRDEPSNE-------KSDVYSFGVILWELATLQQPW 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
ALHY E VIHRD+KP N+L+ +G +K+ DFG S S R G Y+ PE
Sbjct: 126 ALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEM 183
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLN---DAPPCL 161
IE +D + D+W G+ E G P+ D E R++N PP L
Sbjct: 184 IEGKT-----HDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNVDLKFPPFL 235
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME +A F L + S P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
P N+L+D++G I++ DFG + R+ K RT C PE + P Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXL-CG---TPEALAPEIILSKGYNKAVDW 221
Query: 124 WSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
ALHY E VIHRD+KP N+L+ +G +K+ DFG S S R G Y+ PE
Sbjct: 127 ALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEM 184
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLN---DAPPCL 161
IE +D + D+W G+ E G P+ D E R++N PP L
Sbjct: 185 IEGKT-----HDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNVDLKFPPFL 236
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
ALHY E VIHRD+KP N+L+ +G +K+ DFG S S R G Y+ PE
Sbjct: 126 ALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVH-APSLRRRXMCGTLDYLPPEM 183
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLN---DAPPCL 161
IE +D + D+W G+ E G P+ D E R++N PP L
Sbjct: 184 IEGKT-----HDEKVDLWCAGVLCYEFLVGMPPF-DSPSHTETHRRIVNVDLKFPPFL 235
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK H+S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 100 DVYIVQDLMETDLYKLLKTQHLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 156
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L+ ++K+ DFG++ R+ D + T+ Y APE + Y D+
Sbjct: 157 LNTTXDLKIXDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEIML----NSKGYTKSIDI 211
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 212 WSVGCILAEMLSNRPIFPGK 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNI---KLCDFGISGRL--------VD 88
+ AL +L G+ HRD+KP NIL + + K+CDF + + +
Sbjct: 116 VVQDVASALDFL-HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 89 SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ G A YMAPE +E + + YD R D+WSLG+ L L +G P+
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
DV+I +LM T +LLK +S + IC ++ L Y+ + V+HRD+KPSN+L
Sbjct: 120 DVYIVQDLMETDLYKLLKSQQLS-NDHIC-YFLYQILRGLKYI-HSANVLHRDLKPSNLL 176
Query: 69 LDERGNIKLCDFGISGRLVD-----SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
++ ++K+CDFG++ R+ D + T+ Y APE + Y D+
Sbjct: 177 INTTCDLKICDFGLA-RIADPEHDHTGFLTEXVATRWYRAPEIML----NSKGYTKSIDI 231
Query: 124 WSLGITLVELATGE--FPYK 141
WS+G L E+ + FP K
Sbjct: 232 WSVGCILAEMLSNRPIFPGK 251
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + P +I L T + LH L +I+RD+K
Sbjct: 115 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 169
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 221
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEP--ICGKITLSTVKALHYLKETHGVIHRDVK 63
S++++ ME + F L + P +I L T + LH L +I+RD+K
Sbjct: 114 SNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL-TFEYLHSLD----LIYRDLK 168
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRAD 122
P N+L+D++G I++ DFG + R+ K RT G Y+APE I Y+ D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSKG-----YNKAVD 220
Query: 123 VWSLGITLVELATGEFPY 140
W+LG+ + E+A G P+
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 44 TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYM 102
T + LH L +I+RD+KP N+L+D++G I++ DFG + R+ K RT G Y+
Sbjct: 146 TFEYLHSL----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLCGTPEYL 198
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
APE I Y+ D W+LG+ + E+A G P+
Sbjct: 199 APEIILSKG-----YNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ RT G Y+ PE IE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 186
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G P++
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 11/101 (10%)
Query: 44 TVKALHYLKETHG-VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAY 101
K ++YL + ++HR++K N+L+D++ +K+CDFG+S + +K+ AG +
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW 205
Query: 102 MAPE--RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
MAPE R EP N ++DV+S G+ L ELAT + P+
Sbjct: 206 MAPEVLRDEPSNE-------KSDVYSFGVILWELATLQQPW 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG--VIHRDVKPS 65
++V+I ELM T R++ +S I + L +K HG VIHRD+KPS
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLS-----DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPS 141
Query: 66 NILLDERGNIKLCDFGISGRLVDSKA------------RTKNAGCAAYMAPERIEPPNPQ 113
N+L++ ++K+CDFG++ R++D A T+ Y APE +
Sbjct: 142 NLLINSNCDLKVCDFGLA-RIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVML----T 196
Query: 114 KPDYDIRADVWSLGITLVELATGE--FPYKDCK 144
Y DVWS G L EL FP +D +
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG--VIHRDVKPS 65
++V+I ELM T R++ +S I + L +K HG VIHRD+KPS
Sbjct: 87 NEVYIIQELMQTDLHRVISTQMLS-----DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPS 141
Query: 66 NILLDERGNIKLCDFGISGRLVDSKA------RTKNAGCAAYMAPERIEPPNPQ--KPDY 117
N+L++ ++K+CDFG++ R++D A + +G ++A P Y
Sbjct: 142 NLLINSNCDLKVCDFGLA-RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKY 200
Query: 118 DIRADVWSLGITLVELATGE--FPYKDCK 144
DVWS G L EL FP +D +
Sbjct: 201 SRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 167 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 225
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 226 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 14 MELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ER 72
ME + FD + +R ++ E + ++A+ + GV+HRD+K NIL+D R
Sbjct: 95 MEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNR 151
Query: 73 GNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR-ADVWSLGITLV 131
G +KL DFG SG L+ T G Y PE I + Y R A VWSLGI L
Sbjct: 152 GELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RYHRYHGRSAAVWSLGILLY 205
Query: 132 ELATGEFPYK 141
++ G+ P++
Sbjct: 206 DMVCGDIPFE 215
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G+ + E+ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 2 SPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIH 59
S +SK ++I ME T + KR + + + ++ K + Y+ + +I+
Sbjct: 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI-HSKKLIN 145
Query: 60 RDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDI 119
RD+KPSNI L + +K+ DFG+ L + R ++ G YM+PE+I DY
Sbjct: 146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISS-----QDYGK 200
Query: 120 RADVWSLGITLVEL 133
D+++LG+ L EL
Sbjct: 201 EVDLYALGLILAEL 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 44 TVKALHYLKETHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN--AGCA 99
T + L +K H ++HRD+KP NIL+D +K+ DFGI+ L ++ N G
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 100 AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPP 159
Y +PE+ + D D++S+GI L E+ GE P+ + + + + + D+ P
Sbjct: 177 QYFSPEQ-----AKGEATDECTDIYSIGIVLYEMLVGEPPF-NGETAVSIAIKHIQDSVP 230
Query: 160 CLPND 164
+ D
Sbjct: 231 NVTTD 235
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G+ + E+ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 145 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 204 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 161 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 219
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 220 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 252
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 152 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 211 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 141 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 200 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 134 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 193 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 145 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 204 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 137 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 196 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 167 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 225
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 226 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 258
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKART 93
C + L ++ H ++G++HR++KP N+LL + +KL DFG++ + DS+A
Sbjct: 110 CIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
Query: 94 KNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE ++ KP D+W+ G+ L L G P+ D
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKP-----VDIWACGVILYILLVGYPPFWD 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKART 93
C + L ++ H ++G++HR++KP N+LL + +KL DFG++ + DS+A
Sbjct: 109 CIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 164
Query: 94 KNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE ++ KP D+W+ G+ L L G P+ D
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKP-----VDIWACGVILYILLVGYPPFWD 208
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 230
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 230
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 138 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 196
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 197 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKART 93
C + L ++ H ++G++HR++KP N+LL + +KL DFG++ + DS+A
Sbjct: 110 CIQQILESIAYCH----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
Query: 94 KNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE ++ KP D+W+ G+ L L G P+ D
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKP-----VDIWACGVILYILLVGYPPFWD 209
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 216
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 215
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 188
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 216
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLXGTLDYLPPEMIEGRM----- 187
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 215
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 169 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 227
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 228 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 260
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 186
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 212 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 270
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 271 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 303
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 210
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 211 HRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 187
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 215
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 171 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 229
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 230 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 188
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 216
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 183
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 183
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 188
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 216
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 146 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 205 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 102 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 151
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 152 DLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 205
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 230
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 106 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 155
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 156 DLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 209
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 215
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 183
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGIS-GRLVDSKARTKNAGCAAYMAPERIEPPNPQKP 115
V+HRD+KP N+L++ERG +KL DFG++ + + +K Y P+ +
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST---- 176
Query: 116 DYDIRADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
DY + D+W +G E+ATG FP + + R+L
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 107 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAPEIM----LNWMHYNQT 210
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
++L Y+ + G+ HRD+KP N+LLD + +KLCDFG + +LV + Y AP
Sbjct: 133 RSLAYI-HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
E I DY DVWS G L EL G+ FP
Sbjct: 192 ELIFGAT----DYTSSIDVWSAGCVLAELLLGQPIFP 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGV--IHRDVKPSNILL---DERGNI-----KLCDFG 81
+P I + + ++YL + V IHRD+K SNIL+ E G++ K+ DFG
Sbjct: 102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161
Query: 82 ISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
++ R + AG A+MAPE I K +DVWS G+ L EL TGE P++
Sbjct: 162 LA-REWHRTTKMSAAGAYAWMAPEVIRASMFSK-----GSDVWSYGVLLWELLTGEVPFR 215
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 222
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+++ M+L++ FDR++++ + E + + A++YL G++HRD+KP N+
Sbjct: 95 LYLVMQLVSGGELFDRIVEKGFYT--EKDASTLIRQVLDAVYYLHRM-GIVHRDLKPENL 151
Query: 68 LL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
L DE I + DFG+S + G Y+APE + QKP Y D W
Sbjct: 152 LYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL----AQKP-YSKAVDCW 206
Query: 125 SLGITLVELATGEFPYKDCKCDFEVLSRVL 154
S+G+ L G P+ D + D ++ ++L
Sbjct: 207 SIGVIAYILLCGYPPFYD-ENDSKLFEQIL 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 203
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 202
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 202
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ +FG S S+ RT G Y+ PE IE
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 184
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 203
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 235
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 107 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAPEIM----LNWMHYNQT 210
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 54 THGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPP 110
++G++HR++KP N+LL + +KL DFG++ + DS+A AG Y++PE ++
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 111 NPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
KP D+W+ G+ L L G P+ D
Sbjct: 206 PYSKP-----VDIWACGVILYILLVGYPPFWD 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 107 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWYRAPEIM----LNWMHYNQT 210
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 56 GVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
GV+HRD+K NIL+D RG +KL DFG SG L+ T G Y PE I +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWI-----RY 203
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYK 141
Y R A VWSLGI L ++ G+ P++
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPE 105
AL +L + G+I+RD+KP NI+L+ +G++KL DFG+ + D G YMAPE
Sbjct: 133 ALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + ++ D WSLG + ++ TG P+
Sbjct: 192 IL-----MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 54 THGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
+ GV+HRD+K NIL+D RG KL DFG SG L+ + T G Y PE I
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSPPEWIS---- 211
Query: 113 QKPDYDIRADVWSLGITLVELATGEFPYK 141
+ + + A VWSLGI L ++ G+ P++
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ +FG S S+ RT G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPE 105
AL +L + G+I+RD+KP NI+L+ +G++KL DFG+ + D G YMAPE
Sbjct: 133 ALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ + ++ D WSLG + ++ TG P+
Sbjct: 192 IL-----MRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 105 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 154
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 155 DLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 208
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRM----- 184
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 105 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 154
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 155 DLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 208
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RAALCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 37 CGKITLS--------TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 88
C K LS + L +L + G+++RD+K NILLD+ G+IK+ DFG+ +
Sbjct: 112 CHKFDLSRATFYAAEIILGLQFL-HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170
Query: 89 SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
A+T N C P+ I P Y+ D WS G+ L E+ G+ P+
Sbjct: 171 GDAKT-NXFCG---TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 111 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 160
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 161 DLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 214
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVSVPEPICGK-ITLSTVKALHYLKETHGVIHRDVKPS 65
+ DV++ + M T +++ ++ EP+ + + +K + YL + G++HRD+KPS
Sbjct: 83 DRDVYLVFDYMETDLHAVIR---ANILEPVHKQYVVYQLIKVIKYL-HSGGLLHRDMKPS 138
Query: 66 NILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYD----IRA 121
NILL+ ++K+ DFG+S V+ + T N + E + P DY RA
Sbjct: 139 NILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA 198
Query: 122 --------------DVWSLGITLVELATGE--FP 139
D+WSLG L E+ G+ FP
Sbjct: 199 PEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 37 CGKITLS--------TVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 88
C K LS + L +L + G+++RD+K NILLD+ G+IK+ DFG+ +
Sbjct: 113 CHKFDLSRATFYAAEIILGLQFL-HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 171
Query: 89 SKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
A+T N C P+ I P Y+ D WS G+ L E+ G+ P+
Sbjct: 172 GDAKT-NEFCG---TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNAMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDYLPPEMIEGRM----- 182
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 96 NDVYLVTHLMGADLNNIVK----------CAKLTDDHVQFLIYQILRGLKYIHSADIIHR 145
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 199
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRM----- 208
Query: 117 YDIRADVWSLGITLVELATGEFPYK--DCKCDFEVLSRV 153
+D + D+WSLG+ E G+ P++ + ++ +SRV
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 57 VIHRDVKPSNILLD--ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
V HRD+K N LLD +K+CDFG S V G AY+APE + K
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL-----LK 190
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYKD---CKCDFEVLSRVLN 155
+YD + ADVWS G+TL + G +P++D K + + R+LN
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRM----- 183
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 106 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 155
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 156 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 209
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 57 VIHRDVKPSNILLDERG--NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
V HRD+K N LLD +K+CDFG S V G AY+APE + K
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL-----LK 189
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYKD---CKCDFEVLSRVLN 155
+YD + ADVWS G+TL + G +P++D K + + R+LN
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 234
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 139 LQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 256
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 257 QPEYCPDPLYEVMLK 271
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 106 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 155
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 156 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 209
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 102 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 151
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 152 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 205
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGXVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 163 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAV 220
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 154 LN 155
++
Sbjct: 281 ID 282
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPEMIEGRM----- 185
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G+ P++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 119 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 168
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 169 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 222
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 139
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL----GXKYYSTAVDIW 195
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 196 SLGCIFAEMVT 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 120 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 169
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 223
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 110 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 159
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 160 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 213
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 214 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 249
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 135 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 154 LN 155
++
Sbjct: 253 ID 254
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 105 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 154
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 155 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 208
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 102 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 151
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 152 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 205
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 99 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 148
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 149 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 202
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 203 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 238
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 116 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 154 LN 155
++
Sbjct: 234 ID 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 112 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 161
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 162 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 215
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 123 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 172
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 173 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 226
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 112 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 161
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 162 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 215
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 105 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 154
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 155 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 208
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 209 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 140 LQVAKGMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 257
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 258 QPEYCPDPLYEVMLK 272
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 107 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 157 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 210
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 211 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 119 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 168
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 169 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 222
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 17/94 (18%)
Query: 54 THGVIHRDVKPSNILLDERGNIKLCDFGIS------GRLVDSKARTKNAGCAAYMAPERI 107
+H +IHRD+KP NIL+ + G +KLCDFG + G + D + T+ Y APE +
Sbjct: 142 SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR-----WYRAPELL 196
Query: 108 EPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
Y DVW++G + E+ GE FP
Sbjct: 197 ----VGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 138 LQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 255
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 256 QPEYCPDPLYEVMLK 270
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 139 LQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 256
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 257 QPEYCPDPLYEVMLK 271
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 163 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 154 LN 155
++
Sbjct: 281 ID 282
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 163 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 154 LN 155
++
Sbjct: 281 ID 282
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 50 YLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMAPERIE 108
+ ++ G+I+RD+K N++LD G+IK+ DFG+ + TK G Y+APE I
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII- 514
Query: 109 PPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
+P Y D W+ G+ L E+ G+ P++
Sbjct: 515 ---AYQP-YGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 112 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 161
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 162 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 215
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 135 LQVAKGMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 252
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 253 QPEYCPDPLYEVMLK 267
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 140 LQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 257
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 258 QPEYCPDPLYEVMLK 272
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL----GXKYYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 102 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 151
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 152 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 205
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 50 YLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIE 108
+ ++ G+I+RD+K N++LD G+IK+ DFG+ + TK G Y+APE I
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII- 193
Query: 109 PPNPQKPDYDIRADVWSLGITLVELATGEFPYK 141
+P Y D W+ G+ L E+ G+ P++
Sbjct: 194 ---AYQP-YGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 120 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 169
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 223
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 137 LQVAKGMKYLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 254
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 255 QPEYCPDPLYEVMLK 269
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 106 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 155
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 156 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 209
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 111 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 160
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 161 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 214
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 132 LQVAKGMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 249
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 250 QPEYCPDPLYEVMLK 264
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 158 LQVAKGMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 275
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 276 QPEYCPDPLYEVMLK 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + YL + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 159 LQVAKGMKYL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 276
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 277 QPEYCPDPLYEVMLK 291
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 1 MSPQSKESDVWICMELMA---TCFDRLLKRLHVSV--PEPICGKITLSTVKALHYLKETH 55
+ S + +++ E M CF+ ++KR E + ++AL Y + +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFE-IVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 56 GVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPN 111
+IHRDVKP N+LL + N +KL DFG++ +L +S G +MAPE ++
Sbjct: 151 -IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 112 PQKPDYDIRADVWSLGITLVELATGEFPYKDCK 144
KP DVW G+ L L +G P+ K
Sbjct: 210 YGKP-----VDVWGCGVILFILLSGCLPFYGTK 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 96 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 145
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 199
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 96 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 145
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 199
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 97 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 146
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 147 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 200
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 5 SKESDVWICMELMATCFDRLLK---RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
S+ + + ME + ++LK R S+P + +A+ ++ + G+ HRD
Sbjct: 108 SQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI-HSLGICHRD 166
Query: 62 VKPSNILLDERGN-IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
+KP N+L++ + N +KLCDFG + +L+ S+ Y APE + +Y
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELML----GATEYTPS 222
Query: 121 ADVWSLGITLVELATGEFPYKDCKCDFEVLSRVL 154
D+WS+G EL G+ P + + L R++
Sbjct: 223 IDLWSIGCVFGELILGK-PLFSGETSIDQLVRII 255
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 119 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 154 LN 155
++
Sbjct: 237 ID 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ S + G
Sbjct: 115 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 154 LN 155
++
Sbjct: 233 ID 234
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 97 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 146
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 147 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 200
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 8 SDVWICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
+++ + +EL+ FDR++++ + S E ++A+ YL E +G++HRD+KP
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEAVAYLHE-NGIVHRDLKPE 177
Query: 66 NILLDE---RGNIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDIRA 121
N+L +K+ DFG+S ++V+ + K G Y APE + + Y
Sbjct: 178 NLLYATPAPDAPLKIADFGLS-KIVEHQVLMKTVCGTPGYCAPEIL-----RGCAYGPEV 231
Query: 122 DVWSLGITLVELATGEFPYKDCKCDFEVLSRVLN 155
D+WS+GI L G P+ D + D + R+LN
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 154 SFQVAKGMEFLA-SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 213 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKN-AGCAAYMA 103
+ AL +L + G+I+RD+K N+LLD G+ KL DFG+ + + T G Y+A
Sbjct: 134 ISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLND 156
PE + Q+ Y D W++G+ L E+ G P++ D ++ +LND
Sbjct: 193 PEIL-----QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILND 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 98 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 147
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 148 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 201
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 202 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 237
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
VIHRD+KP N+LL G +K+ DFG S S+ R G Y+ PE IE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RDTLCGTLDYLPPEMIEGRM----- 186
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+D + D+WSLG+ E G P++
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D A Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 18/145 (12%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPE---PICGK--ITLSTVKALHYLKETHGVIHR 60
++ +++ ME +L SVPE P+C + L YL + G++H+
Sbjct: 79 EKQKMYMVMEYCVCGMQEMLD----SVPEKRFPVCQAHGYFCQLIDGLEYL-HSQGIVHK 133
Query: 61 DVKPSNILLDERGNIKLCDFGISGRL----VDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
D+KP N+LL G +K+ G++ L D RT + G A+ PE N
Sbjct: 134 DIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT-SQGSPAFQPPEIA---NGLDTF 189
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
+ D+WS G+TL + TG +P++
Sbjct: 190 SGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLD--ERGNIKLCDFGISGRLVDSKARTKNAGCA 99
LS V H ++ + HRD+K N LLD +K+CDFG S V G
Sbjct: 126 LSGVSYCHSMQ----ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 181
Query: 100 AYMAPERIEPPNPQKPDYDIR-ADVWSLGITLVELATGEFPYKD 142
AY+APE + + +YD + ADVWS G+TL + G +P++D
Sbjct: 182 AYIAPEVL-----LRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D A Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 154 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 213 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 150 SFQVAKGMEFLA-SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 209 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 154 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 213 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 3 PQSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG- 56
P + V++ ++LM + +++ H S P +TL V+ Y LK H
Sbjct: 127 PYGEFKSVYVVLDLMESDLHQII---HSSQP------LTLEHVRYFLYQLLRGLKYMHSA 177
Query: 57 -VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAR-----TKNAGCAAYMAPERIEPP 110
VIHRD+KPSN+L++E +K+ DFG++ L S A T+ Y APE +
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 111 NPQKPDYDIRADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVLNDAPPCL 161
+ +Y D+WS+G E+ FP K+ +++ VL P +
Sbjct: 238 H----EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 23/150 (15%)
Query: 1 MSPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
M+ K+S ++I ME T +D L+ +++ ++ ++AL Y+ + G+I
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYWRLFRQILEALSYI-HSQGII 138
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRL--------VDSK-------ARTKNAGCAAYMA 103
HRD+KP NI +DE N+K+ DFG++ + +DS+ T G A Y+A
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVEL 133
E ++ Y+ + D++SLGI E+
Sbjct: 199 TEVLDGTG----HYNEKIDMYSLGIIFFEM 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 518
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 573
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 618
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 156 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 215 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 266
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 154 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 213 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 154 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 213 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
D ++ M M T +++ + E + +K L Y+ + GV+HRD+KP N+
Sbjct: 121 DFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYI-HSAGVVHRDLKPGNLA 176
Query: 69 LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGI 128
++E +K+ DFG++ R D++ T Y APE I Y+ D+WS+G
Sbjct: 177 VNEDCELKILDFGLA-RHADAEM-TGYVVTRWYRAPEVI----LSWMHYNQTVDIWSVGC 230
Query: 129 TLVELATGEFPYK 141
+ E+ TG+ +K
Sbjct: 231 IMAEMLTGKTLFK 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 9 DVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
D ++ M M T +++ + E + +K L Y+ + GV+HRD+KP N+
Sbjct: 103 DFYLVMPFMQTDLQKIMG---LKFSEEKIQYLVYQMLKGLKYI-HSAGVVHRDLKPGNLA 158
Query: 69 LDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGI 128
++E +K+ DFG++ R D++ T Y APE I Y+ D+WS+G
Sbjct: 159 VNEDCELKILDFGLA-RHADAEM-TGYVVTRWYRAPEVI----LSWMHYNQTVDIWSVGC 212
Query: 129 TLVELATGEFPYK 141
+ E+ TG+ +K
Sbjct: 213 IMAEMLTGKTLFK 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 96 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 145
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D A Y APE + Y+
Sbjct: 146 DLKPSNLAVNEDCELKILDFGLARHTDDEMA--GFVATRWYRAPEIM----LNWMHYNQT 199
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 91
VP + ++ L +L +H V+HRD+KP NIL+ G IKL DFG++ A
Sbjct: 117 VPTETIKDMMFQLLRGLDFL-HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 92 RTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLS 151
T Y APE + + Y D+WS+G E+ + P D + L
Sbjct: 176 LTSVVVTLWYRAPEVL-----LQSSYATPVDLWSVGCIFAEMFRRK-PLFRGSSDVDQLG 229
Query: 152 RVLN 155
++L+
Sbjct: 230 KILD 233
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 204 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 263 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 206 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 265 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 91
VP + ++ L +L +H V+HRD+KP NIL+ G IKL DFG++ A
Sbjct: 117 VPTETIKDMMFQLLRGLDFL-HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 92 RTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLS 151
T Y APE + + Y D+WS+G E+ + P D + L
Sbjct: 176 LTSVVVTLWYRAPEVL-----LQSSYATPVDLWSVGCIFAEMFRRK-PLFRGSSDVDQLG 229
Query: 152 RVLN 155
++L+
Sbjct: 230 KILD 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 145 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 204 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 145 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 204 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 199 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 258 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 191 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 250 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 152
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 207
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 91
VP + ++ L +L +H V+HRD+KP NIL+ G IKL DFG++ A
Sbjct: 117 VPTETIKDMMFQLLRGLDFL-HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 92 RTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLS 151
T Y APE + + Y D+WS+G E+ + P D + L
Sbjct: 176 LTSVVVTLWYRAPEVL-----LQSSYATPVDLWSVGCIFAEMFRRK-PLFRGSSDVDQLG 229
Query: 152 RVLN 155
++L+
Sbjct: 230 KILD 233
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 145 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 204 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 3 PQSKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG- 56
P + V++ ++LM + +++ H S P +TL V+ Y LK H
Sbjct: 128 PYGEFKSVYVVLDLMESDLHQII---HSSQP------LTLEHVRYFLYQLLRGLKYMHSA 178
Query: 57 -VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAR-----TKNAGCAAYMAPERIEPP 110
VIHRD+KPSN+L++E +K+ DFG++ L S A T+ Y APE +
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 111 NPQKPDYDIRADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVLNDAPPCL 161
+ +Y D+WS+G E+ FP K+ +++ VL P +
Sbjct: 239 H----EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 287
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 145 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 204 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+CDFG++ + +
Sbjct: 197 SFQVAKGMEFLA-SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 256 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 138
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI---NFRR--FTSAS 193
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 238
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ ++D + + + A
Sbjct: 141 LQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 258
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 259 QPEYCPDPLYEVMLK 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 96 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 151
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 152 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 206
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 207 IGCIMYTLLVGKPPF-ETSCLKETYLRI 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 139
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 195
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 196 SLGCIFAEMVT 206
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 33 PEPICGKITL----STVKALHYLKETHGVIHRDVKPSNILLDER-GNIKLCDFGISGRLV 87
P PI K+ L ++ LH + V HRD+KP N+L++E G +KLCDFG + +L
Sbjct: 126 PPPILIKVFLFQLIRSIGCLHL--PSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 88 DSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE 137
S+ Y APE I Y D+WS+G E+ GE
Sbjct: 184 PSEPNVAYICSRYYRAPELIF----GNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 133
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 189
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ D+G++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDYGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 518
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 573
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 574 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 618
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 131
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 187
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 92 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 147
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 202
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 203 IGCIMYTLLVGKPPF-ETSCLKETYLRI 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 131
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 187
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 131
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 187
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 309
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG+ GRL++ T G A + P + I++DVW
Sbjct: 310 ANILVGENLVCKVADFGL-GRLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 367 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 408
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 92 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 147
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 148 LFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEVDVWS 202
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 203 IGCIMYTLLVGKPPF-ETSCLKETYLRI 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 29/158 (18%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 123 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 172
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP--QKPDYD 118
D+KPSN+ ++E +K+ DFG+ AR + Y+A P Y+
Sbjct: 173 DLKPSNLAVNEDCELKILDFGL--------ARHTDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 119 IRADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 136
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + T Y APE + Y D+W
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK----YYSTAVDIW 192
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 193 SLGCIFAEMVT 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 23/150 (15%)
Query: 1 MSPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVI 58
M+ K+S ++I ME T +D L+ +++ ++ ++AL Y+ + G+I
Sbjct: 81 MTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEALSYI-HSQGII 138
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRL--------VDSK-------ARTKNAGCAAYMA 103
HRD+KP NI +DE N+K+ DFG++ + +DS+ T G A Y+A
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVEL 133
E ++ Y+ + D++SLGI E+
Sbjct: 199 TEVLDGTG----HYNEKIDMYSLGIIFFEM 224
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 8 SDVWICMELMATCFDRLL------KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM +++ +R+ + + +CG +K LH + G+IHRD
Sbjct: 100 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 149
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ + T Y APE I Y
Sbjct: 150 LKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVI-----LGMGYKENV 204
Query: 122 DVWSLGITLVELATGEFPYK 141
D+WS+G + EL G ++
Sbjct: 205 DIWSVGCIMGELVKGSVIFQ 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
S+V++ LM + ++K +S + + ++ L Y+ + G+IHRD+KPSN+
Sbjct: 106 SEVYLVTTLMGADLNNIVKSQALS--DEHVQFLVYQLLRGLKYI-HSAGIIHRDLKPSNV 162
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
++E +++ DFG++ R D + T Y APE + Y+ D+WS+G
Sbjct: 163 AVNEDSELRILDFGLA-RQADEEM-TGYVATRWYRAPEIM----LNWMHYNQTVDIWSVG 216
Query: 128 ITLVELATGE--FPYKDCKCDFEVLSRVLNDAPP 159
+ EL G+ FP D + + V+ P
Sbjct: 217 CIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLL------KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM +++ +R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ + T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI-----LGMGYAANV 206
Query: 122 DVWSLGITLVELATG 136
D+WS+G + EL G
Sbjct: 207 DIWSVGCIMGELVKG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 120 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 169
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ R D + A Y APE + Y+
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLA-RHTDDEMXGXVA-TRWYRAPEIM----LNWMHYNQT 223
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 116 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 171
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 172 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 226
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 227 IGCIMYTLLVGKPPF-ETSCLKETYLRI 253
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 114 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 169
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 170 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 224
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 225 IGCIMYTLLVGKPPF-ETSCLKETYLRI 251
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 84 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 140
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 141 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 195
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 196 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 240
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 110 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 166
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 167 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 221
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 222 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 266
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 85 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 141
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 142 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 196
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 197 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 241
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 99 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
T Y APE + Y D+WSLG E+ T
Sbjct: 158 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 198
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 141 LQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 258
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 259 QPEYCPDPLYEVMLK 273
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 140 LQVAKGMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 257
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 258 QPEYCPDPLYEVMLK 272
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 50 YLKETHGVIHRDVKPSNILLDERGNIKLCDFGI-SGRLVDSKARTKNAGCAAYMAPERIE 108
+ G+I+RD+K N++LD G+IK+ DFG+ ++D + G Y+APE I
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII- 192
Query: 109 PPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+P Y D W+ G+ L E+ G+ P+
Sbjct: 193 ---AYQP-YGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 138
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 139 ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 193
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 238
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL---VDSKARTKNAGCA 99
+ ++A+H + + HG++H D+KP+N L+ + G +KL DFGI+ ++ + G
Sbjct: 135 NMLEAVHTIHQ-HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 100 AYMAPERIEPPNPQKPD------YDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
YM PE I+ + + + ++DVWSLG L + G+ P++ L +
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 154 LN 155
++
Sbjct: 253 ID 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 10 VWICMELMATCFDRLLKRLHV---SVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
V++ +EL C R L LH ++ EP V YL VIHRD+K N
Sbjct: 90 VFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGN 145
Query: 67 ILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWS 125
+ L+E +K+ DFG++ ++ D + + G Y+APE + K + DVWS
Sbjct: 146 LFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEVDVWS 200
Query: 126 LGITLVELATGEFPYKDCKCDFEVLSRV 153
+G + L G+ P+ + C E R+
Sbjct: 201 IGCIMYTLLVGKPPF-ETSCLKETYLRI 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 9 DVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD+
Sbjct: 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRDL 190
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRAD 122
KPSNI++ +K+ DFG++ S T Y APE I Y D
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENVD 245
Query: 123 VWSLGITLVELATGE--FPYKD 142
+WS+G + E+ + FP +D
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRD 267
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 143
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 198
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 138 LQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 255
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 256 QPEYCPDPLYEVMLK 270
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 140 LQVAKGMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 257
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 258 QPEYCPDPLYEVMLK 272
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 199 LQVAKGMKFLA-SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 316
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 317 QPEYCPDPLYEVMLK 331
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 79 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 135
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 190
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 191 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 235
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 138
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 193
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 238
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
AL YL E +IHRD+KP NI+L +R K+ D G + L + T+ G Y+A
Sbjct: 134 ALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE +E + Y + D WS G E TG P+
Sbjct: 193 PELLE-----QKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLD---ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
AL YL E +IHRD+KP NI+L +R K+ D G + L + T+ G Y+A
Sbjct: 133 ALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE +E + Y + D WS G E TG P+
Sbjct: 192 PELLE-----QKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 7 ESDVWICMELMATCFDR---LLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E+ VWI MEL R +++ + + I LST AL YL E+ +HRD+
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST--ALAYL-ESKRFVHRDIA 138
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ +KL DFG+S + DS + G +MAPE I N ++ + +
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI---NFRR--FTSAS 193
Query: 122 DVWSLGITLVE-LATGEFPYKDCKCDFEVLSRVLN-DAPPCLPNDP 165
DVW G+ + E L G P++ K + +V+ R+ N + P PN P
Sbjct: 194 DVWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCP 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L K + +L + +HRD+ N +LDE+ +K+ DFG++ + D + + + A
Sbjct: 145 LQVAKGMKFL-ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAPPC 160
+ + + + Q + ++DVWS G+ L EL T G PY D F++ +L
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLL 262
Query: 161 LPN---DPLFGRTIK 172
P DPL+ +K
Sbjct: 263 QPEYCPDPLYEVMLK 277
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETH--GVIHR 60
S+V++ LM + ++K C ++ V+ L Y LK H G+IHR
Sbjct: 106 SEVYLVTTLMGADLNNIVK----------CQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 155
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +++ DFG++ R D + T Y APE + Y+
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLA-RQADEEM-TGYVATRWYRAPEIM----LNWMHYNQT 209
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVLNDAPP 159
D+WS+G + EL G+ FP D + + V+ P
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 250
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMAT--CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I ME M+ D L + + P + + Y+ E +HRD++
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 189
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 244
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRD 267
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E ++ + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 75 ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPE 133
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 189
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E ++ + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 77 ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPE 135
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 191
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 96 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 145
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 200
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 201 DLWSVGCIMGEMVCHKILFPGRD 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 107 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 156
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 157 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 211
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 212 DLWSVGCIMGEMVCHKILFPGRD 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAP 104
+ + YL +HG++HRD+ SN+LL NIK+ DFG++ +L + C P
Sbjct: 122 ITGMLYL-HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-CG---TP 176
Query: 105 ERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
I P + + + +DVWSLG L G P+
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 57 VIHRDVKPSNILLD--ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
V HRD+K N LLD +K+C FG S V G AY+APE + K
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL-----LK 190
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYKD---CKCDFEVLSRVLN 155
+YD + ADVWS G+TL + G +P++D K + + R+LN
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 103 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 152
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 207
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRD 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 96 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 145
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 200
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRD 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 188
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 189 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 144
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 145 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 199
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRD 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I +E M + LL L + + + L A+ YL E IHR
Sbjct: 79 TREPPFYIIIEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHR 135
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
D+ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 134 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 190
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 191 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 103 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 152
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 207
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRD 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 96 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 145
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 200
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRD 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 101 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 150
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 151 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 205
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 206 DIWSVGCIMGEMVRHKILFPGRD 228
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I +E M + LL L + + + L A+ YL E IHR
Sbjct: 79 TREPPFYIIIEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHR 135
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
D+ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 182
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 183 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 128 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 184
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 185 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 182
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 183 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 127 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 183
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 184 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------XQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 56 GVIHRDVKPSNILLDER---GNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPN 111
GV+HRD+KP N+LL + +KL DFG++ + D +A AG Y++PE +
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 112 PQKPDYDIRADVWSLGITLVELATGEFPYKD 142
KP D+W+ G+ L L G P+ D
Sbjct: 183 YGKP-----VDIWACGVILYILLVGYPPFWD 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 135 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIKWTAPEAI-- 191
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 192 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 188
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 189 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 131 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 187
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 188 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 136 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 192
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 193 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 57 VIHRDVKPSNILLD--ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
V HRD+K N LLD +K+C FG S V G AY+APE + K
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL-----LK 190
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYKD---CKCDFEVLSRVLN 155
+YD + ADVWS G+TL + G +P++D K + + R+LN
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ FG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILGFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 121 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 177
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 178 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 182
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 183 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 104 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 153
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S Y APE I Y
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVI-----LGMGYKENV 208
Query: 122 DVWSLGITLVELATG 136
D+WS+G + E+ G
Sbjct: 209 DIWSVGCIMGEMIKG 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 25 LKRLHV---SVPEPICGKITLSTVKALHYL-KETHGVIHRDVKPSNILLDE-RGNIKLCD 79
LKR V V C +I +K L +L T +IHRD+K NI + G++K+ D
Sbjct: 120 LKRFKVXKIKVLRSWCRQI----LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 175
Query: 80 FGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFP 139
G++ S A+ G + APE E YD DV++ G +E AT E+P
Sbjct: 176 LGLATLKRASFAKA-VIGTPEFXAPEXYEEK------YDESVDVYAFGXCXLEXATSEYP 228
Query: 140 YKDCKCDFEVLSRVLNDAPPC 160
Y +C+ ++ RV + P
Sbjct: 229 YSECQNAAQIYRRVTSGVKPA 249
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIKWTAPEAI-- 182
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 183 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 33/148 (22%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI-----EPPNPQKPD 116
+KPSNI++ +K+ DFG+ ART AG + M PE + P
Sbjct: 152 LKPSNIVVKSDCTLKILDFGL--------ART--AGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 117 YDIRADVWSLGITLVELATGE--FPYKD 142
Y D+WS+G + E+ + FP +D
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFPGRD 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I +E M + LL L + + + L A+ YL E IHR
Sbjct: 77 TREPPFYIIIEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHR 133
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
D+ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 187
Query: 118 DIRADVWSLGITLVELAT-GEFPY 140
I++DVW+ G+ L E+AT G PY
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 145
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T+ Y+APE + P YD D+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEK-----YDKSCDM 200
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 201 WSLGVIMYILLCGYPPF 217
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I +E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEXTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 57 VIHRDVKPSNILLD--ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
V HRD+K N LLD +K+ DFG S V G AY+APE + K
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL-----LK 190
Query: 115 PDYDIR-ADVWSLGITLVELATGEFPYKD---CKCDFEVLSRVLN 155
+YD + ADVWS G+TL + G +P++D K + + R+LN
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME + F R+ R + E +I S +A+ YL + + HRDVKP N+L
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLY 164
Query: 70 -DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+R N +KL DFG + + T Y+APE + P YD D+WSL
Sbjct: 165 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDMWSL 219
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 220 GVIMYILLCGYPPF 233
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 133
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 189
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 135
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 191
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 134
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 190
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 135
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 191
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 192 SLGCIFAEMVT 202
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DF ++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFYLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I +E M + LL L + + + L A+ YL E IHR
Sbjct: 80 TREPPFYIIIEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHR 136
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
D+ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 190
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 228
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 128 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 186 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I +E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 5 SKESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
+KE ++I E MA + D L V P + + + Y+ E IHRD+
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI-ERKNYIHRDL 135
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDYDI 119
+ +N+L+ E K+ DFG++ R+++ T G + APE I + I
Sbjct: 136 RAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGC-----FTI 189
Query: 120 RADVWSLGITLVELAT-GEFPY 140
+++VWS GI L E+ T G+ PY
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPY 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 134
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 190
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 128 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 186 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 123 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 181 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 123 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 181 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 95 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 153
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 208
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 209 WSLGVIMYILLCGYPPF 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 94 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 152
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 207
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 208 WSLGVIMYILLCGYPPF 224
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 136 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 194 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 240
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 93 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 151
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 206
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 207 WSLGVIMYILLCGYPPF 223
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 125 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 182
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 183 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I +E M + LL L + + + L A+ YL E IHR
Sbjct: 84 TREPPFYIIIEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHR 140
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
D+ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------SQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG+ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDSELKILDFGLCRHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 131
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 187
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 131
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 187
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 188 SLGCIFAEMVT 198
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 128 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 185
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 186 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 125 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 182
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 183 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 132
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 188
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 189 SLGCIFAEMVT 199
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 128 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 186 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 136
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 137 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 192
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 193 SLGCIFAEMVT 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQ 133
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 189
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 121 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 178
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
PE + + I++DVW+ G+ L E+AT G PY
Sbjct: 179 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPE 134
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 190
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 191 SLGCIFAEMVT 201
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 88 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 146
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 201
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 202 WSLGVIMYILLCGYPPF 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME + F R+ R + E +I S +A+ YL + + HRDVKP N+L
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLY 194
Query: 70 -DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+R N +KL DFG + + T Y+APE + P YD D+WSL
Sbjct: 195 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDMWSL 249
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 250 GVIMYILLCGYPPF 263
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 5 SKESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
++E ++I E MA + D L V P + + + Y+ E IHRD+
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI-ERKNYIHRDL 136
Query: 63 KPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDYDI 119
+ +N+L+ E K+ DFG++ R+++ T G + APE I + I
Sbjct: 137 RAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGC-----FTI 190
Query: 120 RADVWSLGITLVELAT-GEFPY 140
++DVWS GI L E+ T G+ PY
Sbjct: 191 KSDVWSFGILLYEIVTYGKIPY 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 123 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 181 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 7 ESDVWICMELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
E+ +++ E + + + ++ +P P+ ++ L + +H V+HRD+KP
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPE 133
Query: 66 NILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
N+L++ G IKL DFG++ V + Y APE + Y D+W
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDIW 189
Query: 125 SLGITLVELAT 135
SLG E+ T
Sbjct: 190 SLGCIFAEMVT 200
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 147
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 202
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 203 WSLGVIMYILLCGYPPF 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 127 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 184
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 185 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 231
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 87 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPEN 145
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDM 200
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ + L G P+
Sbjct: 201 WSLGVIMYILLCGYPPF 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 7 ESDVWICMEL-----MATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
E+ +++ ME + T + +R+ + +I ++ + ++H L G +HRD
Sbjct: 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA-IDSVHRL----GYVHRD 187
Query: 62 VKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNA-GCAAYMAPERIEPPNPQKPDYDI 119
+KP NILLD G+I+L DFG +L D R+ A G Y++PE ++
Sbjct: 188 IKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSY 247
Query: 120 --RADVWSLGITLVELATGEFPY 140
D W+LG+ E+ G+ P+
Sbjct: 248 GPECDWWALGVFAYEMFYGQTPF 270
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 142 AMEYL-EKKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 199
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
PE + + I++DVW+ G+ L E+AT G PY
Sbjct: 200 PESL-----AYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME + F R+ R + E +I S +A+ YL + + HRDVKP N+L
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLY 200
Query: 70 -DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+R N +KL DFG + + T Y+APE + P YD D+WSL
Sbjct: 201 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDMWSL 255
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 256 GVIMYILLCGYPPF 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 123 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 181 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME + F R+ R + E +I S +A+ YL + + HRDVKP N+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLY 150
Query: 70 -DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+R N +KL DFG + + T Y+APE + P YD D+WSL
Sbjct: 151 TSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDMWSL 205
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 206 GVIMYILLCGYPPF 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ D G++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDAGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 147
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSK---FPVRWSPPEVLMYSKFSSKSD 203
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------XQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ DFG++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ K + +L + IHRD+ NILL E+ +K+ DFG++ + +
Sbjct: 150 SFQVAKGMEFLA-SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y I++DVWS G+ L E+ + G PY K D E R+
Sbjct: 209 PLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I E M + LL L + + + L A+ YL E IHR
Sbjct: 286 TREPPFYIITEFM--TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHR 342
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
++ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 343 NLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 396
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 33/148 (22%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV+I MELM ++++ R+ + + +CG +K LH + G+IHRD
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI-----EPPNPQKPD 116
+KPSNI++ +K+ DFG+ ART AG + M PE + P
Sbjct: 152 LKPSNIVVKSDCTLKILDFGL--------ART--AGTSFMMEPEVVTRYYRAPEVILGMG 201
Query: 117 YDIRADVWSLGITLVELATGE--FPYKD 142
Y D+WS+G + E+ + FP +D
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFPGRD 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T +AG + A
Sbjct: 121 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKWTA 178
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
PE + + I++DVW+ G+ L E+AT G PY
Sbjct: 179 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 103 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
Y APE + Y D+WSLG E+ T
Sbjct: 162 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 202
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME M F R+ +R + E +I A+ +L +H + HRDVKP N+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL-HSHNIAHRDVKPENLLY 161
Query: 70 DERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+ +KL DFG + + +T Y+APE + P YD D+WSL
Sbjct: 162 TSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVAPEVLGPEK-----YDKSCDMWSL 215
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 216 GVIMYILLCGFPPF 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 102 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
Y APE + Y D+WSLG E+ T
Sbjct: 161 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++I E MA + D L P P + + + ++ E IHRD++ +NI
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRNYIHRDLRAANI 315
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDYDIRADVW 124
L+ K+ DFG++ R+++ T G + APE I + + I++DVW
Sbjct: 316 LVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAINFGS-----FTIKSDVW 369
Query: 125 SLGITLVELAT-GEFPY 140
S GI L+E+ T G PY
Sbjct: 370 SFGILLMEIVTYGRIPY 386
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 353
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 407
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
I ME M F R+ +R + E +I A+ +L +H + HRDVKP N+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL-HSHNIAHRDVKPENLLY 142
Query: 70 DERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
+ +KL DFG + + +T Y+APE + P YD D+WSL
Sbjct: 143 TSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVAPEVLGPEK-----YDKSCDMWSL 196
Query: 127 GITLVELATGEFPY 140
G+ + L G P+
Sbjct: 197 GVIMYILLCGFPPF 210
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 127
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK---FPVRWSPPEVLMYSKFSSKSD 183
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 184 IWAFGVLMWEIYSLGKMPYE 203
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 27/145 (18%)
Query: 36 ICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--------- 86
+C I L +A+ +L + G++HRD+KPSNI +K+ DFG+ +
Sbjct: 119 VCLHIFLQIAEAVEFL-HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 87 ---VDSKAR-TKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
+ + AR T G YM+PE+I Y + D++SLG+ L EL +P+
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQI-----HGNSYSHKVDIFSLGLILFELL---YPFST 229
Query: 143 CKCDFEVLSRVLNDAPPCLPNDPLF 167
L+ V N P PLF
Sbjct: 230 QMERVRTLTDVRNLKFP-----PLF 249
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ D G++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDRGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 103 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
Y APE + Y D+WSLG E+ T
Sbjct: 162 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 202
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 353
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 407
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 353
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 407
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 23 RLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFG 81
R +L ++P + +++L Y+ G+ HRD+KP N+LLD G +KL DFG
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFG 187
Query: 82 ISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE--FP 139
+ L+ + Y APE I +Y D+WS G + EL G+ FP
Sbjct: 188 SAKILIAGEPNVSXICSRYYRAPELIF----GATNYTTNIDIWSTGCVMAELMQGQPLFP 243
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G A++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPAFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 138
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK---FPVRWSPPEVLMYSKFSSKSD 194
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 195 IWAFGVLMWEIYSLGKMPYE 214
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 10 VWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
+++ ELM T +++ + + + LH L E GV+HRD+ P NILL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL 167
Query: 70 DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGIT 129
+ +I +CDF ++ +T Y APE + Q + D+WS G
Sbjct: 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVM----QFKGFTKLVDMWSAGCV 223
Query: 130 LVEL 133
+ E+
Sbjct: 224 MAEM 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 131
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK---FPVRWSPPEVLMYSKFSSKSD 187
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 188 IWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 132
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK---FPVRWSPPEVLMYSKFSSKSD 188
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 189 IWAFGVLMWEIYSLGKMPYE 208
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 10 VWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL 69
+++ ELM T +++ + + + LH L E GV+HRD+ P NILL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL 167
Query: 70 DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGIT 129
+ +I +CDF ++ +T Y APE + Q + D+WS G
Sbjct: 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVM----QFKGFTKLVDMWSAGCV 223
Query: 130 LVEL 133
+ E+
Sbjct: 224 MAEM 227
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 147
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSK---FPVRWSPPEVLMYSKFSSKSD 203
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 103 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
Y APE + Y D+WSLG E+ T
Sbjct: 162 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 202
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETHG--VIHR 60
+DV++ LM + ++K C K+T V+ L Y LK H +IHR
Sbjct: 100 NDVYLVTHLMGADLNNIVK----------CQKLTDDHVQFLIYQILRGLKYIHSADIIHR 149
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +K+ D G++ D T Y APE + Y+
Sbjct: 150 DLKPSNLAVNEDCELKILDGGLARHTDDEM--TGYVATRWYRAPEIM----LNWMHYNQT 203
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVL 154
D+WS+G + EL TG FP D +++ R++
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 32 VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSK 90
+P P+ ++ L + +H V+HRD+KP N+L++ G IKL DFG++ V +
Sbjct: 100 IPLPLIKSYLFQLLQGLAFC-HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 158
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
Y APE + Y D+WSLG E+ T
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVT 199
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 35 PICGKITLSTVKALHYLKE--THGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 90
P +I L + + L YL + +IHRDVK +NILLDE + DFG++ +L+D K
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 197
Query: 91 -ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEV 149
G ++APE + + + DV+ G+ L+EL TG+ +
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSE-----KTDVFGYGVMLLELITGQRAFD-------- 244
Query: 150 LSRVLND 156
L+R+ ND
Sbjct: 245 LARLAND 251
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + P + + Y+ E +HRD++
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 391
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 392 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 449 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 490
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 8 SDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHY-----LKETH--GVIHR 60
S+V++ LM + ++K C ++ V+ L Y LK H G+IHR
Sbjct: 98 SEVYLVTTLMGADLNNIVK----------CQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 147
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
D+KPSN+ ++E +++ DFG++ R D + T Y APE + Y+
Sbjct: 148 DLKPSNVAVNEDCELRILDFGLA-RQADEEM-TGYVATRWYRAPEIM----LNWMHYNQT 201
Query: 121 ADVWSLGITLVELATGE--FPYKDCKCDFEVLSRVLNDAPP 159
D+WS+G + EL G+ FP D + + V+ P
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSP 242
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSKARTKNAGC--AAYM 102
+ YL+E + +HRD+ N+LL R K+ DFG+S L DS ++AG +
Sbjct: 122 GMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N +K + R+DVWS G+T+ E L+ G+ PYK K
Sbjct: 181 APECI---NFRK--FSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 102 QDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG------IKHLH----SAGIIHRD 151
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 206
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 8 SDVWICMELMATCFDRLLK------RLHVSVPEPICGKITLSTVKALHYLKETHGVIHRD 61
DV++ MELM ++++ R+ + + + G +K LH + G+IHRD
Sbjct: 95 QDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXG------IKHLH----SAGIIHRD 144
Query: 62 VKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
+KPSNI++ +K+ DFG++ S T Y APE I Y
Sbjct: 145 LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI-----LGMGYKENV 199
Query: 122 DVWSLGITLVELATGE--FPYKD 142
D+WS+G + E+ + FP +D
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRD 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQ 113
H ++HRD+KP N+L++ G +KL DFG++ + ++ T Y AP+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-- 195
Query: 114 KPDYDIRADVWSLGITLVELATGE--FP 139
Y D+WS+G E+ TG+ FP
Sbjct: 196 --KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 55 HGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQ 113
H ++HRD+KP N+L++ G +KL DFG++ + ++ T Y AP+ +
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-- 195
Query: 114 KPDYDIRADVWSLGITLVELATGE--FP 139
Y D+WS+G E+ TG+ FP
Sbjct: 196 --KYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I E M + LL L + + + L A+ YL E IHR
Sbjct: 325 TREPPFYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHR 381
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
++ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 382 NLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 435
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 473
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLV-DSKAR 92
C + L +V H +G++HRD+KP N+LL + +KL DFG++ + D +A
Sbjct: 108 CIQQILESVNHCH----LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 93 TKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE + KP D+W+ G+ L L G P+ D
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKP-----VDMWACGVILYILLVGYPPFWD 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 133
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 134 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 191 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 232
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD++
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRA 131
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 132 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 189 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 230
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR---LVDSKARTKN 95
+I + + LHYL T +IHRDVK NILLDE K+ DFGIS + L +
Sbjct: 143 EICIGAARGLHYL-HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
G Y+ PE K ++DV+S G+ L E+
Sbjct: 202 KGTLGYIDPEYF-----IKGRLTEKSDVYSFGVVLFEV 234
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHR+++ +NIL+ + + K+ DFG++ RL++ T G + APE I
Sbjct: 122 EERNYIHRNLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTAPEAI-- 178
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ I++DVWS GI L E+ T G PY
Sbjct: 179 ---NYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 35 PICGKITLSTVKALHYLKE--THGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 90
P +I L + + L YL + +IHRDVK +NILLDE + DFG++ +L+D K
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDX 189
Query: 91 -ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEV 149
G ++APE + + + DV+ G+ L+EL TG+ +
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSE-----KTDVFGYGVMLLELITGQRAFD-------- 236
Query: 150 LSRVLND 156
L+R+ ND
Sbjct: 237 LARLAND 243
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDER---GNIKLCDFGISGRLV-DSKAR 92
C L +V +H H ++HRD+KP N+LL + +KL DFG++ + + +A
Sbjct: 135 CIHQILESVNHIH----QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW 190
Query: 93 TKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE + KP D+W+ G+ L L G P+ D
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKP-----VDIWACGVILYILLVGYPPFWD 235
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 131 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 187
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++I E MA + D L P P + + + ++ E IHRD++ +NI
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRNYIHRDLRAANI 142
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDYDIRADVW 124
L+ K+ DFG++ R+++ T G + APE I + I++DVW
Sbjct: 143 LVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIKWTAPEAI-----NFGSFTIKSDVW 196
Query: 125 SLGITLVELAT-GEFPY 140
S GI L+E+ T G PY
Sbjct: 197 SFGILLMEIVTYGRIPY 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 131 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 187
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 5 SKESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTV----KALHYLKETHGVIHR 60
++E +I E M + LL L + + + L A+ YL E IHR
Sbjct: 283 TREPPFYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHR 339
Query: 61 DVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEPPNPQKPDY 117
++ N L+ E +K+ DFG+S RL+ T +AG + APE + +
Sbjct: 340 NLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 393
Query: 118 DIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 431
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG------- 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T AG + A
Sbjct: 124 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTA 181
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 182 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 37 CGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLV-DSKAR 92
C + L +V H +G++HRD+KP N+LL + +KL DFG++ + D +A
Sbjct: 108 CIQQILESVNHCH----LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 93 TKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKD 142
AG Y++PE + +K Y D+W+ G+ L L G P+ D
Sbjct: 164 FGFAGTPGYLSPEVL-----RKDPYGKPVDMWACGVILYILLVGYPPFWD 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 121 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQG--AKFPIKWTAPEAA 177
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 5 SKESDVWICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
+K+ ++I E MA C L+ + ++ +A+ YL E+ +HRD+
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL-ESKQFLHRDLA 132
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPDYDIRAD 122
N L++++G +K+ DFG+S ++D + T + G P R PP + ++D
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSRGSK---FPVRWSPPEVLMYSKFSSKSD 188
Query: 123 VWSLGITLVEL-ATGEFPYK 141
+W+ G+ + E+ + G+ PY+
Sbjct: 189 IWAFGVLMWEIYSLGKMPYE 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 128 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 184
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 238
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 128 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEWTARQG--AKFPIKWTAPEAA 184
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGR---LVDSKARTKN 95
+I + + LHYL T +IHRDVK NILLDE K+ DFGIS + L +
Sbjct: 143 EICIGAARGLHYL-HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 96 AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
G Y+ PE K ++DV+S G+ L E+
Sbjct: 202 KGTLGYIDPEYF-----IKGRLTEKSDVYSFGVVLFEV 234
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMA 103
A+ YL E IHRD+ N L+ E +K+ DFG+S RL+ T AG + A
Sbjct: 125 AMEYL-EKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTA 182
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK--DCKCDFEVLSR 152
PE + + I++DVW+ G+ L E+AT G PY D +E+L +
Sbjct: 183 PESL-----AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP 112
E +HRD++ +NIL+ E K+ DFG++ RL++ T G A + P
Sbjct: 124 ERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAA 180
Query: 113 QKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDAP-PCLPNDP 165
+ I++DVWS GI L EL T G PY + EVL +V PC P P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 36 ICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKART- 93
+C I + +A+ +L + G++HRD+KPSNI +K+ DFG+ + D + +T
Sbjct: 165 VCLHIFIQIAEAVEFL-HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 94 -----------KNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
G YM+PE+I N Y + D++SLG+ L EL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNN-----YSHKVDIFSLGLILFEL 269
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-------LG 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC-- 98
+ + + +L + IHRD+ NILL E +K+CDFG++ + + +
Sbjct: 205 SFQVARGMEFLS-SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+MAPE I Y ++DVWS G+ L E+ + G PY + D + SR+
Sbjct: 264 PLKWMAPESI-----FDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL 315
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-------LG 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS-------GRLVDSKARTK 94
+ K ++YL+E HG++HR++ N+LL +++ DFG++ +L+ S+A+T
Sbjct: 122 VQIAKGMYYLEE-HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKC 145
+MA E I Y ++DVWS G+T+ EL T G PY +
Sbjct: 181 ----IKWMALESI-----HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGIS-------GRLVDSKARTK 94
+ K ++YL+E HG++HR++ N+LL +++ DFG++ +L+ S+A+T
Sbjct: 140 VQIAKGMYYLEE-HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKC 145
+MA E I Y ++DVWS G+T+ EL T G PY +
Sbjct: 199 ----IKWMALESI-----HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 35/198 (17%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY-KDCKCDFEVLSRVLNDAPPCLPNDPLFGRTIKASI 175
+ AD+WS+G+ L +G P+ D K E L+ V A D F T +++
Sbjct: 194 LGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANV--SAVNYEFEDEYFSNT--SAL 247
Query: 176 AKDNGRSTEFIRKRSYED 193
AKD FIR+ +D
Sbjct: 248 AKD------FIRRLLVKD 259
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG------- 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 13 CMELMATC------FDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSN 66
C+ ++ C F R+ R + E +I S +A+ YL + + HRDVKP N
Sbjct: 133 CLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN-IAHRDVKPEN 191
Query: 67 ILL-DERGN--IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
+L +R N +KL DFG + + T Y+APE + P YD D
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK-----YDKSCDX 246
Query: 124 WSLGITLVELATGEFPY 140
WSLG+ L G P+
Sbjct: 247 WSLGVIXYILLCGYPPF 263
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-------LG 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
E ++I E M+ + D L + + P + + Y+ E +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLAA 142
Query: 65 SNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
+NIL+ E K+ DFG++ RL++ T G A + P + I++DVW
Sbjct: 143 ANILVGENLVCKVADFGLA-RLIEDNEYTARQG--AKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 125 SLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA-PPCLPNDP 165
S GI L EL T G PY + EVL +V PC P P
Sbjct: 200 SFGILLTELTTKGRVPYPGM-VNREVLDQVERGYRMPCPPECP 241
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 140
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 192
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 193 LGLEADMWSIGVITYILLSGASPF 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICG-KITLSTVKALHYLKETHGVIHRDVKP 64
+DV + +EL++ FD L ++ +S E K L V LH T + H D+KP
Sbjct: 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH----TKKIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ +IKL DFG++ + D G ++APE + EP
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-------LG 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 85 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 140
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 192
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 193 LGLEADMWSIGVITYILLSGASPF 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 35/144 (24%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDER-GNIKLCDFGISG----------RLVDSK 90
L+ KAL + + G++HRDVKPSN L + R L DFG++ + V S+
Sbjct: 124 LNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE 182
Query: 91 ARTK-------------------NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLV 131
A+ + AG + APE + + P+ D+WS G+ +
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL----TKCPNQTTAIDMWSAGVIFL 238
Query: 132 ELATGEFPYKDCKCDFEVLSRVLN 155
L +G +P+ D L++++
Sbjct: 239 SLLSGRYPFYKASDDLTALAQIMT 262
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAY 101
L + + YL E +HRD+ N +LDE +K+ DFG++ ++D + + A
Sbjct: 131 LQVARGMEYLAE-QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR 189
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK 141
+ + + Q + ++DVWS G+ L EL T G PY+
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
++DV + +EL++ FD L ++ S+ E + + +HYL + + H D+KP
Sbjct: 87 KTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL-HSKRIAHFDLKP 143
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ IKL DFGI+ ++ G ++APE + EP
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP-------LG 196
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 197 LEADMWSIGVITYILLSGASPF 218
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + +EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
++DV + +EL++ FD L ++ S+ E + + +HYL + + H D+KP
Sbjct: 101 KTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL-HSKRIAHFDLKP 157
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ IKL DFGI+ ++ G ++APE + EP
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP-------LG 210
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 211 LEADMWSIGVITYILLSGASPF 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV--DSKARTKNAGC--AAYM 102
+ YL+E + +HR++ N+LL R K+ DFG+S L DS ++AG +
Sbjct: 448 GMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N +K + R+DVWS G+T+ E L+ G+ PYK K
Sbjct: 507 APECI---NFRK--FSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 56 GVIHRDVKPSNILLDER---GNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPN 111
GV+HRD+KP N+LL + +KL DFG++ + + +A AG Y++PE +
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 112 PQKPDYDIRADVWSLGITLVELATGEFPYKD 142
KP D+W+ G+ L L G P+ D
Sbjct: 201 YGKP-----VDLWACGVILYILLVGYPPFWD 226
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
++DV + +EL++ FD L ++ S+ E + + +HYL + + H D+KP
Sbjct: 80 KTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL-HSKRIAHFDLKP 136
Query: 65 SNILLDERG----NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERI--EPPNPQKPDYD 118
NI+L ++ IKL DFGI+ ++ G ++APE + EP
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP-------LG 189
Query: 119 IRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 190 LEADMWSIGVITYILLSGASPF 211
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG---ISGRLV----DSKA 91
+I VK + YL G++H+D+K N+ D G + + DFG ISG L + K
Sbjct: 134 QIAQEIVKGMGYL-HAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKL 191
Query: 92 RTKNAGCAAYMAPERIEPPNP----QKPDYDIRADVWSLGITLVELATGEFPYK 141
R +N G ++APE I +P K + +DV++LG EL E+P+K
Sbjct: 192 RIQN-GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 8 SDVWICMELM--ATCFDRLL-KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
+D+++ MEL F+R++ KR+ K LS V H L V HRD+KP
Sbjct: 96 TDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL----NVAHRDLKP 151
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N L +KL DFG++ R K G Y++P+ +E Y
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL------YGPEC 205
Query: 122 DVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
D WS G+ + L G P+ D EV+ ++
Sbjct: 206 DEWSAGVMMYVLLCGYPPF-SAPTDXEVMLKI 236
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 17/141 (12%)
Query: 8 SDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
S++ + +E A F L L V E ++ ++ ++YL + + ++H D+KP
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ-NNIVHLDLKPQ 160
Query: 66 NILLDE---RGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYD---I 119
NILL G+IK+ DFG+S ++ + + G Y+APE + +YD
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--------NYDPITT 212
Query: 120 RADVWSLGITLVELATGEFPY 140
D+W++GI L T P+
Sbjct: 213 ATDMWNIGIIAYMLLTHTSPF 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 5 SKESDVWICMELMA---TCFDRLLKRLHVSV--PEPICGKITLSTVKALHYLKETHGVIH 59
S + +++ E M CF+ ++KR E + ++AL Y + + +IH
Sbjct: 98 SSDGMLYMVFEFMDGADLCFE-IVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIH 155
Query: 60 RDVKPSNILLDERGN---IKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPNPQKP 115
RDVKP +LL + N +KL FG++ +L +S G +MAPE ++ KP
Sbjct: 156 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKP 215
Query: 116 DYDIRADVWSLGITLVELATGEFPYKDCK 144
DVW G+ L L +G P+ K
Sbjct: 216 -----VDVWGCGVILFILLSGCLPFYGTK 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKP 115
++HRD+KP N+L+++RG +KL DFG++ + + Y AP+ +
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR---- 184
Query: 116 DYDIRADVWSLGITLVELATGE--FP----YKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y D+WS G L E+ TG+ FP + K F+++ P + P +
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244
Query: 170 TIKASIAKD 178
I+ +D
Sbjct: 245 NIQQRPPRD 253
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 20/103 (19%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--------VDSK------ 90
++AL Y+ + G+IHR++KP NI +DE N+K+ DFG++ + +DS+
Sbjct: 126 LEALSYI-HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 91 -ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE 132
T G A Y+A E ++ Y+ + D +SLGI E
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTG----HYNEKIDXYSLGIIFFE 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 8 SDVWICMELM--ATCFDRLL-KRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKP 64
+D+++ MEL F+R++ KR+ K LS V H L V HRD+KP
Sbjct: 79 TDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL----NVAHRDLKP 134
Query: 65 SNILL---DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRA 121
N L +KL DFG++ R K G Y++P+ +E Y
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL------YGPEC 188
Query: 122 DVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
D WS G+ + L G P+ D EV+ ++
Sbjct: 189 DEWSAGVMMYVLLCGYPPF-SAPTDXEVMLKI 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 1 MSPQSKESDVWICMELMA---TCFDRLLKRLHVSV--PEPICGKITLSTVKALHYLKETH 55
+ S + +++ E M CF+ ++KR E + ++AL Y + +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFE-IVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 56 GVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSK-ARTKNAGCAAYMAPERIEPPN 111
+IHRDVKP +LL + N +KL FG++ +L +S G +MAPE ++
Sbjct: 151 -IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 112 PQKPDYDIRADVWSLGITLVELATGEFPYKDCK 144
KP DVW G+ L L +G P+ K
Sbjct: 210 YGKP-----VDVWGCGVILFILLSGCLPFYGTK 237
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 6 KESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
++ ++I E MA + D L R + K +L +A+ YL E + +HRD+
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNFVHRDLA 144
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ E K+ DFG L + T++ G + APE + ++ + ++
Sbjct: 145 ARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEAL-----REKKFSTKS 195
Query: 122 DVWSLGITLVELAT-GEFPY 140
DVWS GI L E+ + G PY
Sbjct: 196 DVWSFGILLWEIYSFGRVPY 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++I E MA + D L R + K +L +A+ YL E + +HRD+ N+
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNFVHRDLAARNV 320
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRADVWS 125
L+ E K+ DFG L + T++ G + APE + ++ + ++DVWS
Sbjct: 321 LVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEAL-----REKKFSTKSDVWS 371
Query: 126 LGITLVELAT-GEFPY 140
GI L E+ + G PY
Sbjct: 372 FGILLWEIYSFGRVPY 387
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA---AYMAPERIEP 109
E IHRD++ +NIL+ K+ DFG++ RL++ T G + APE
Sbjct: 122 ERMNYIHRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIKWTAPE---- 176
Query: 110 PNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRV 153
+ I++DVWS GI L EL T G PY + EVL +V
Sbjct: 177 -AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-NREVLEQV 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 7 ESDVWICMELMA--TCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLKETHGVIHRDVK 63
++DV + EL+A FD L ++ ++ E K L+ V LH L+ + H D+K
Sbjct: 86 KTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ----IAHFDLK 141
Query: 64 PSNILLDERG----NIKLCDFGISGRLVDSKARTKNA-GCAAYMAPERI--EPPNPQKPD 116
P NI+L +R IK+ DFG++ + +D KN G ++APE + EP
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHK-IDFGNEFKNIFGTPEFVAPEIVNYEP------- 193
Query: 117 YDIRADVWSLGITLVELATGEFPY 140
+ AD+WS+G+ L +G P+
Sbjct: 194 LGLEADMWSIGVITYILLSGASPF 217
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 6 KESDVWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
++ ++I E MA + D L R + K +L +A+ YL E + +HRD+
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNFVHRDLA 135
Query: 64 PSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRA 121
N+L+ E K+ DFG L + T++ G + APE + ++ + ++
Sbjct: 136 ARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEAL-----REAAFSTKS 186
Query: 122 DVWSLGITLVELAT-GEFPY 140
DVWS GI L E+ + G PY
Sbjct: 187 DVWSFGILLWEIYSFGRVPY 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++I E MA + D L R + K +L +A+ YL E + +HRD+ N+
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNNFVHRDLAARNV 133
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGC--AAYMAPERIEPPNPQKPDYDIRADVWS 125
L+ E K+ DFG L + T++ G + APE + ++ + ++DVWS
Sbjct: 134 LVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEAL-----REKKFSTKSDVWS 184
Query: 126 LGITLVELAT-GEFPY 140
GI L E+ + G PY
Sbjct: 185 FGILLWEIYSFGRVPY 200
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D ++ ++L D+G++ ++ +
Sbjct: 142 LKALDYC-HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
PE + + Q DY + D+WSLG L + P+ + +++ L R+ L
Sbjct: 201 PELL--VDYQMYDYSL--DMWSLGCMLASMIFRREPFFHGQDNYDQLVRI----AKVLGT 252
Query: 164 DPLFGRTIKASIAKD 178
+ L+G K I D
Sbjct: 253 EELYGYLKKYHIDLD 267
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D ++ ++L D+G++ ++ +
Sbjct: 147 LKALDYC-HSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPPCLPN 163
PE + + Q DY + D+WSLG L + P+ + +++ L R+ L
Sbjct: 206 PELL--VDYQMYDYSL--DMWSLGCMLASMIFRREPFFHGQDNYDQLVRI----AKVLGT 257
Query: 164 DPLFGRTIKASIAKD 178
+ L+G K I D
Sbjct: 258 EELYGYLKKYHIDLD 272
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 56 GVIHRDVKPSNILLDER---GNIKLCDFGISGRLV-DSKARTKNAGCAAYMAPERIEPPN 111
GV+HR++KP N+LL + +KL DFG++ + + +A AG Y++PE +
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 112 PQKPDYDIRADVWSLGITLVELATGEFPYKD 142
KP D+W+ G+ L L G P+ D
Sbjct: 190 YGKP-----VDLWACGVILYILLVGYPPFWD 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 10 VWICMELMA--TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
++I E MA + D L P P + + + ++ E IHRD++ +NI
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI-EQRNYIHRDLRAANI 309
Query: 68 LLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLG 127
L+ K+ DFG+ AR + APE I + + I++DVWS G
Sbjct: 310 LVSASLVCKIADFGL--------ARVGAKFPIKWTAPEAINFGS-----FTIKSDVWSFG 356
Query: 128 ITLVELAT-GEFPY 140
I L+E+ T G PY
Sbjct: 357 ILLMEIVTYGRIPY 370
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 59 HRDVKPSNILLDERGNIKLCDFGISGRLVDSKART--KNAGCAAYMAPERIEPPNPQKPD 116
HRDVKP NIL+ L DFGI+ D K G Y APER +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHAT--- 213
Query: 117 YDIRADVWSLGITLVELATGEFPYK 141
RAD+++L L E TG PY+
Sbjct: 214 --YRADIYALTCVLYECLTGSPPYQ 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 30 VSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILL----DERGNIKLCDFGISGR 85
V +P + + + +HYL + V+HRD+KP+NIL+ ERG +K+ D G + R
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYL-HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-R 180
Query: 86 LVDSKARTKN-----AGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
L +S + Y APE + Y D+W++G EL T E P
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGAR----HYTKAIDIWAIGCIFAELLTSE-PI 235
Query: 141 KDCK 144
C+
Sbjct: 236 FHCR 239
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 39 KITLSTVKALHYL-KETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAG 97
KI T +A+ ++ ++ +IHRD+K N+LL +G IKLCDFG + + + +A
Sbjct: 140 KIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199
Query: 98 CAAYMAPERIEPPNPQKPDYDI-----------RADVWSLGITLVELATGEFPYKD 142
A + E P +I + D+W+LG L L + P++D
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 12 ICM--ELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
ICM EL++ L+K+ P+ K S ++ L L + +IH D+KP NIL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENIL 232
Query: 69 LDERG--NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
L ++G IK+ DFG S + + Y APE I Y + D+WSL
Sbjct: 233 LKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRAPEVILGAR-----YGMPIDMWSL 285
Query: 127 GITLVELATG 136
G L EL TG
Sbjct: 286 GCILAELLTG 295
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 12 ICM--ELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
ICM EL++ L+K+ P+ K S ++ L L + +IH D+KP NIL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENIL 232
Query: 69 LDERG--NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
L ++G IK+ DFG S + + Y APE I Y + D+WSL
Sbjct: 233 LKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRAPEVILGAR-----YGMPIDMWSL 285
Query: 127 GITLVELATG 136
G L EL TG
Sbjct: 286 GCILAELLTG 295
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 12 ICM--ELMATCFDRLLKRLHVS-VPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNIL 68
ICM EL++ L+K+ P+ K S ++ L L + +IH D+KP NIL
Sbjct: 174 ICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENIL 232
Query: 69 LDERG--NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
L ++G IK+ DFG S + + Y APE I Y + D+WSL
Sbjct: 233 LKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRAPEVILGAR-----YGMPIDMWSL 285
Query: 127 GITLVELATG 136
G L EL TG
Sbjct: 286 GCILAELLTG 295
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+L+D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 22 DRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG 81
D L + + E + G + L + + YL+E VIHRD+ N L+ E IK+ DFG
Sbjct: 91 DYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEA-SVIHRDLAARNCLVGENQVIKVSDFG 148
Query: 82 ISGRLVDSKARTKNAGC---AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGE 137
++ R V T + G + +PE Y ++DVWS G+ + E + G+
Sbjct: 149 MT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGK 202
Query: 138 FPYKD 142
PY++
Sbjct: 203 IPYEN 207
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKP 115
V+HRD+KP N+L++ G +K+ DFG++ + + T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK---- 176
Query: 116 DYDIRADVWSLGITLVELATG 136
Y D+WS+G E+ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKP 115
V+HRD+KP N+L++ G +K+ DFG++ + + T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK---- 176
Query: 116 DYDIRADVWSLGITLVELATG 136
Y D+WS+G E+ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
++HRD+KP NIL+ G +KL DFG++ A T Y APE + +
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL-----LQST 195
Query: 117 YDIRADVWSLGITLVEL 133
Y D+WS+G E+
Sbjct: 196 YATPVDMWSVGCIFAEM 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 7 ESDVWICMELMATC--FDRLLKR-LHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E++ W+ + MA ++ L++ HV I ++ + YL+E++ +HRD+
Sbjct: 441 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEESN-FVHRDLA 497
Query: 64 PSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYMAPERIEPPNPQKPDYDI 119
N+LL + K+ DFG+S L KA+T + APE I N K +
Sbjct: 498 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---NYYK--FSS 552
Query: 120 RADVWSLGITLVE-LATGEFPYKDCK 144
++DVWS G+ + E + G+ PY+ K
Sbjct: 553 KSDVWSFGVLMWEAFSYGQKPYRGMK 578
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 7 ESDVWICMELMATC--FDRLLKR-LHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVK 63
E++ W+ + MA ++ L++ HV I ++ + YL+E++ +HRD+
Sbjct: 440 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEESN-FVHRDLA 496
Query: 64 PSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYMAPERIEPPNPQKPDYDI 119
N+LL + K+ DFG+S L KA+T + APE I N K +
Sbjct: 497 ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI---NYYK--FSS 551
Query: 120 RADVWSLGITLVE-LATGEFPYKDCK 144
++DVWS G+ + E + G+ PY+ K
Sbjct: 552 KSDVWSFGVLMWEAFSYGQKPYRGMK 577
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 51 LKETH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTK---NAGCAAYMAPE 105
LK+ H + HRD+K N+LL + DFG++ + K+ G YMAPE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELAT 135
+E + D +R D++++G+ L ELA+
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 149 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 207
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 208 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 243
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG-VIHRDVKPSNIL 68
+ ME + + RLL + H + + ++ L + Y++ + ++HRD++ NI
Sbjct: 98 MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 69 L---DERGNI--KLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L DE + K+ DFG+S + V S + G +MAPE I ++ Y +AD
Sbjct: 157 LQSLDENAPVCAKVADFGLSQQSVHSVSGL--LGNFQWMAPETI---GAEEESYTEKADT 211
Query: 124 WSLGITLVELATGEFPYKD 142
+S + L + TGE P+ +
Sbjct: 212 YSFAMILYTILTGEGPFDE 230
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 123 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 181
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 182 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--RTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 118 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEP 176
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 177 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 212
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 121 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 180 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 121 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 180 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 125 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 183
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 184 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 124 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 182
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 183 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 118 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 177 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTKNAGCAAYMAPERIEPPNPQKP 115
V+HRD+KP N+L++ G +K+ DFG++ + + T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK---- 176
Query: 116 DYDIRADVWSLGITLVELATG 136
Y D+WS+G E+ G
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 120 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 179 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 234
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 235 HDNYDQLVRI 244
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 121 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 180 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 215
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 120 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 179 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 234
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 235 HDNYDQLVRI 244
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 126 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 184
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 185 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 240
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 241 HDNYDQLVRI 250
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 116 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 174
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 175 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 210
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 118 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 177 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 122 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 180
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 181 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 119 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 178 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 233
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 234 HDNYDQLVRI 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 117 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 176 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNAGCA--AY 101
K + YL T IHRD+ NIL++ +K+ DFG++ L K + K G + +
Sbjct: 143 KGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
APE + + + + +DVWS G+ L EL T
Sbjct: 202 YAPESL-----TESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNA 96
+ T K + YL T IHRD+ NIL++ +K+ DFG++ L K + K
Sbjct: 136 QYTSQICKGMEYLG-TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 194
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 195 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-DSKARTK-NAG 97
K + +L E +HRD+ N+L+ +K+CDFG++ ++ DS + NA
Sbjct: 177 FAYQVAKGMEFL-EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNAR 235
Query: 98 C-AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPY 140
+MAPE + + Y I++DVWS GI L E+ + G PY
Sbjct: 236 LPVKWMAPESL-----FEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 57 VIHRDVKPSNILL--DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
+IH D+KP NILL +R IK+ DFG S +L + + Y +PE +
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL-----LG 232
Query: 115 PDYDIRADVWSLGITLVELATGE 137
YD+ D+WSLG LVE+ TGE
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGE 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 22 DRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG 81
D L + + E + G + L + + YL+E VIHRD+ N L+ E IK+ DFG
Sbjct: 94 DYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFG 151
Query: 82 ISGRLVDSKARTKNAGC---AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGE 137
++ R V T + G + +PE Y ++DVWS G+ + E + G+
Sbjct: 152 MT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGK 205
Query: 138 FPYKD 142
PY++
Sbjct: 206 IPYEN 210
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 22 DRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG 81
D L + + E + G + L + + YL+E VIHRD+ N L+ E IK+ DFG
Sbjct: 91 DYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFG 148
Query: 82 ISGRLVDSKARTKNAGC---AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGE 137
++ R V T + G + +PE Y ++DVWS G+ + E + G+
Sbjct: 149 MT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGK 202
Query: 138 FPYKD 142
PY++
Sbjct: 203 IPYEN 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV----DSKARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 123 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 182 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 139 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 198 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 139 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 198 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 235
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 22 DRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG 81
D L + + E + G + L + + YL+E VIHRD+ N L+ E IK+ DFG
Sbjct: 89 DYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFG 146
Query: 82 ISGRLVDSKARTKNAGC---AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGE 137
++ R V T + G + +PE Y ++DVWS G+ + E + G+
Sbjct: 147 MT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGK 200
Query: 138 FPYKD 142
PY++
Sbjct: 201 IPYEN 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 137 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 196 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 22 DRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFG 81
D L + + E + G + L + + YL+E VIHRD+ N L+ E IK+ DFG
Sbjct: 92 DYLRTQRGLFAAETLLG-MCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFG 149
Query: 82 ISGRLVDSKARTKNAGC---AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGE 137
++ R V T + G + +PE Y ++DVWS G+ + E + G+
Sbjct: 150 MT-RFVLDDQYTSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGK 203
Query: 138 FPYKD 142
PY++
Sbjct: 204 IPYEN 208
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 57 VIHRDVKPSNILL--DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
+IH D+KP NILL +R IK+ DFG S +L + + Y +PE +
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL-----LG 213
Query: 115 PDYDIRADVWSLGITLVELATGE 137
YD+ D+WSLG LVE+ TGE
Sbjct: 214 MPYDLAIDMWSLGCILVEMHTGE 236
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 123 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 182 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 219
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 25 LKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGIS 83
K+L+ ++ + +KAL Y + G++HRDVKP N+++D E ++L D+G++
Sbjct: 121 FKQLYQTLTDYDIRFYMYEILKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 84 GRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDC 143
+ + PE + + Q DY + D+WSLG L + + P+
Sbjct: 180 EFYHPGQEYNVRVASRYFKGPELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHG 235
Query: 144 KCDFEVLSRV 153
+++ L R+
Sbjct: 236 HDNYDQLVRI 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K + YL+E ++HRD+ N+L+ ++K+ DFG++ RL++ + NA
Sbjct: 124 VQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKM 181
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I + ++DVWS G+T+ EL T G PY
Sbjct: 182 PIKWMALECI-----HYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 117 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 176 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 213
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
K +++I +E+ + +L K + + E I + + +++ E+ G+IHRD+KP+
Sbjct: 101 KFDELYIVLEIADSDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPA 158
Query: 66 NILLDERGNIKLCDFGISGRLVDS------------------------KARTKNAGCAAY 101
N LL++ ++K+CDFG++ R ++S K T + Y
Sbjct: 159 NCLLNQDCSVKVCDFGLA-RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWY 217
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
APE I + +Y D+WS G EL
Sbjct: 218 RAPELI----LLQENYTKSIDIWSTGCIFAEL 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 40 ITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC- 98
+ L + + YL+E VIHRD+ N L+ E IK+ DFG++ R V T + G
Sbjct: 128 MCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTK 185
Query: 99 --AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKD 142
+ +PE Y ++DVWS G+ + E + G+ PY++
Sbjct: 186 FPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGKIPYEN 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 129 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 188 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K + YL+E ++HRD+ N+L+ ++K+ DFG++ RL++ + NA
Sbjct: 147 VQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKM 204
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I + ++DVWS G+T+ EL T G PY
Sbjct: 205 PIKWMALECI-----HYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAYM 102
+ YL+E++ +HRD+ N+LL + K+ DFG+S L KA+T +
Sbjct: 119 GMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCK 144
APE I N K + ++DVWS G+ + E + G+ PY+ K
Sbjct: 178 APECI---NYYK--FSSKSDVWSFGVLMWEAFSYGQKPYRGMK 215
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 57 VIHRDVKPSNILL--DERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQK 114
+IH D+KP NILL +R IK+ DFG S +L + + Y +PE +
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVL-----LG 232
Query: 115 PDYDIRADVWSLGITLVELATGE 137
YD+ D+WSLG LVE+ TGE
Sbjct: 233 MPYDLAIDMWSLGCILVEMHTGE 255
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ + +
Sbjct: 141 LKALDYC-HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRV 153
PE + + Q DY + D+WSLG L + + P+ +++ L R+
Sbjct: 200 PELL--VDYQMYDYSL--DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 122
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 181
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG-VIHRDVKPSNIL 68
+ ME + + RLL + H + + ++ L + Y++ + ++HRD++ NI
Sbjct: 98 MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 69 L---DERGNI--KLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L DE + K+ DFG S + V S + G +MAPE I ++ Y +AD
Sbjct: 157 LQSLDENAPVCAKVADFGTSQQSVHSVSGL--LGNFQWMAPETI---GAEEESYTEKADT 211
Query: 124 WSLGITLVELATGEFPYKD 142
+S + L + TGE P+ +
Sbjct: 212 YSFAMILYTILTGEGPFDE 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 125
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 184
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 145
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 204
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 155 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 214 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 120
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 179
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 150 TYQLARGMEYLA-SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 209 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + IHRD+ N +L E + + DFG+S ++ + GCA+ + +
Sbjct: 149 GMEYLS-SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ--GCASKLPVKW 205
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+ + Y + +DVW+ G+T+ E+ T G+ PY
Sbjct: 206 LALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 152 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 211 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 158
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 217
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 24/154 (15%)
Query: 1 MSPQSKESDVWICMELMA------TCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKE- 53
++ +K++ W + L++ + FD L R V+V I K+ LST L +L
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMI--KLALSTASGLAHLHME 119
Query: 54 ---THG---VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKART------KNAGCAAY 101
T G + HRD+K NIL+ + G + D G++ R DS T G Y
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH-DSATDTIDIAPNHRVGTKRY 178
Query: 102 MAPERIEPP-NPQKPDYDIRADVWSLGITLVELA 134
MAPE ++ N + + RAD++++G+ E+A
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 38/150 (25%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPP 110
IHRD+ NILL K+CDFG+ S +V AR +MAPE I
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP----VKWMAPESI--- 242
Query: 111 NPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y +DVWS GI L EL + G PY P +P D F +
Sbjct: 243 --FNCVYTFESDVWSYGIFLWELFSLGSSPY------------------PGMPVDSKFYK 282
Query: 170 TIKASIAKDNGRSTEFIRKRSYEDKSTCYE 199
IK S E Y+ TC++
Sbjct: 283 MIKEGFRM---LSPEHAPAEMYDIMKTCWD 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 38/150 (25%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPP 110
IHRD+ NILL K+CDFG+ S +V AR +MAPE I
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP----VKWMAPESI--- 235
Query: 111 NPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y +DVWS GI L EL + G PY P +P D F +
Sbjct: 236 --FNCVYTFESDVWSYGIFLWELFSLGSSPY------------------PGMPVDSKFYK 275
Query: 170 TIKASIAKDNGRSTEFIRKRSYEDKSTCYE 199
IK S E Y+ TC++
Sbjct: 276 MIKEGFRM---LSPEHAPAEMYDIMKTCWD 302
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 38/150 (25%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPP 110
IHRD+ NILL K+CDFG+ S +V AR +MAPE I
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP----VKWMAPESI--- 237
Query: 111 NPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y +DVWS GI L EL + G PY P +P D F +
Sbjct: 238 --FNCVYTFESDVWSYGIFLWELFSLGSSPY------------------PGMPVDSKFYK 277
Query: 170 TIKASIAKDNGRSTEFIRKRSYEDKSTCYE 199
IK S E Y+ TC++
Sbjct: 278 MIKEGF---RMLSPEHAPAEMYDIMKTCWD 304
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 38/150 (25%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPP 110
IHRD+ NILL K+CDFG+ S +V AR +MAPE I
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP----VKWMAPESI--- 242
Query: 111 NPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y +DVWS GI L EL + G PY P +P D F +
Sbjct: 243 --FNCVYTFESDVWSYGIFLWELFSLGSSPY------------------PGMPVDSKFYK 282
Query: 170 TIKASIAKDNGRSTEFIRKRSYEDKSTCYE 199
IK S E Y+ TC++
Sbjct: 283 MIKEGFRM---LSPEHAPAEMYDIMKTCWD 309
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 58/150 (38%), Gaps = 38/150 (25%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPP 110
IHRD+ NILL K+CDFG+ S +V AR +MAPE I
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP----VKWMAPESI--- 219
Query: 111 NPQKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRVLNDAPPCLPNDPLFGR 169
Y +DVWS GI L EL + G PY P +P D F +
Sbjct: 220 --FNCVYTFESDVWSYGIFLWELFSLGSSPY------------------PGMPVDSKFYK 259
Query: 170 TIKASIAKDNGRSTEFIRKRSYEDKSTCYE 199
IK S E Y+ TC++
Sbjct: 260 MIKEGFRM---LSPEHAPAEMYDIMKTCWD 286
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 209 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 268 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 53 ETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--ARTKNAGCAAYMAPERIEPP 110
E+H IHRD+ N L+D +K+ DFG++ ++D + + + APE
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVF--- 177
Query: 111 NPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCKCDFEVLSRV 153
Y ++DVW+ GI + E + G+ PY D + EV+ +V
Sbjct: 178 --HYFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYTNSEVVLKV 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 7 ESDVWICMELM--ATCFDRLLKRLH--VSVPEPICGKITLSTVKALHYLKETHGVIHRDV 62
++D+ + ME + FDR++ + + + K ++ +H + ++H D+
Sbjct: 158 KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY----ILHLDL 213
Query: 63 KPSNILLDERG--NIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIR 120
KP NIL R IK+ DFG++ R + N G ++APE + +YD
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV--------NYDFV 265
Query: 121 A---DVWSLGITLVELATGEFPYKDCKCDFEVLSRVL 154
+ D+WS+G+ L +G P+ D E L+ +L
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFL-GDNDAETLNNIL 301
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 137 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 196 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 136 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 195 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 194 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 194 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 136 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 195 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 194 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 194 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 156 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 215 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
PE + DYD D+WSLG + + P+
Sbjct: 194 PELL----VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 45 VKALHYLKETHGVIHRDVKPSNILLD-ERGNIKLCDFGISGRLVDSKARTKNAGCAAYMA 103
+KAL Y + G++HRDVKP N+++D E ++L D+G++ K +
Sbjct: 135 LKALDYC-HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 104 PERIEPPNPQKPDYDIRADVWSLG 127
PE + DYD D+WSLG
Sbjct: 194 PELL----VDLQDYDYSLDMWSLG 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--------------- 91
+ YL + +IHRD+ N L+ E N+ + DFG++ +VD K
Sbjct: 120 GMAYL-HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 92 RTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
R G +MAPE I YD + DV+S GI L E+
Sbjct: 179 RYTVVGNPYWMAPEMI-----NGRSYDEKVDVFSFGIVLCEI 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--RTKNA 96
+ T K + YL T IHR++ NIL++ +K+ DFG++ L K + K
Sbjct: 119 QYTSQICKGMEYLG-TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP 177
Query: 97 GCA--AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
G + + APE + + + + +DVWS G+ L EL T
Sbjct: 178 GESPIFWYAPESL-----TESKFSVASDVWSFGVVLYELFT 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 158 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPV 216
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 217 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
++HRD+KP NIL+ G +KL DFG++ A Y APE + +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL-----LQST 187
Query: 117 YDIRADVWSLGITLVEL 133
Y D+WS+G E+
Sbjct: 188 YATPVDMWSVGCIFAEM 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K + YL++ ++HRD+ N+L+ ++K+ DFG++ RL+D +A
Sbjct: 126 MQIAKGMSYLEDVR-LVHRDLAARNVLVKSPNHVKITDFGLA-RLLDIDETEYHADGGKV 183
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I + + ++DVWS G+T+ EL T G PY
Sbjct: 184 PIKWMALESI-----LRRRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +K+ DFG++ + +D T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 41 TLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC 98
T + + YL + IHRD+ N+L+ E +++ DFG++ + +D +T N
Sbjct: 163 TYQLARGMEYLA-SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 99 -AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE + Y ++DVWS G+ + E+ T G PY
Sbjct: 222 PVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ N+L+D K+ DFG+S L D A T G +
Sbjct: 163 GMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT 221
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCKCDFEVLSRV 153
APE I + +DVWS G+ + E LA GE PY + + +V+S V
Sbjct: 222 APEAIAFRT-----FSSASDVWSFGVVMWEVLAYGERPYWNM-TNRDVISSV 267
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALH----------YLKETHGVIHR 60
+I MELMA L L + P P +L+ + LH YL+E H IHR
Sbjct: 124 FILMELMAG--GDLKSFLRETRPRP-SQPSSLAMLDLLHVARDIACGCQYLEENH-FIHR 179
Query: 61 DVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPD 116
D+ N LL G K+ DFG++ R + + + GCA M P + PP +
Sbjct: 180 DIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPVKWMPPEAFMEGI 236
Query: 117 YDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ + D WS G+ L E+ + G PY K + EVL V
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 273
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 33/125 (26%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDE-------------------------RGNIK 76
+ +KAL+YL++ + H D+KP NILLD+ IK
Sbjct: 144 IEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIK 202
Query: 77 LCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG 136
L DFG + D N Y APE I +D+ +D+WS G L EL TG
Sbjct: 203 LIDFGCATFKSDYHGSIINT--RQYRAPEVI-----LNLGWDVSSDMWSFGCVLAELYTG 255
Query: 137 EFPYK 141
++
Sbjct: 256 SLLFR 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ N+L+D K+ DFG+S L D A T G +
Sbjct: 163 GMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT 221
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKDCKCDFEVLSRV 153
APE I + +DVWS G+ + E LA GE PY + + +V+S V
Sbjct: 222 APEAIAFRT-----FSSASDVWSFGVVMWEVLAYGERPYWNM-TNRDVISSV 267
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 34/155 (21%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
K +++I +E+ + +L K + + E I + + ++ E+ G+IHRD+KP+
Sbjct: 103 KFDELYIVLEIADSDLKKLFKT-PIFLTEQHVKTILYNLLLGEKFIHES-GIIHRDLKPA 160
Query: 66 NILLDERGNIKLCDFGISGRLVDS---------------------------KARTKNAGC 98
N LL++ ++K+CDFG++ R ++S K T +
Sbjct: 161 NCLLNQDCSVKICDFGLA-RTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVT 219
Query: 99 AAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
Y APE I + +Y D+WS G EL
Sbjct: 220 RWYRAPELI----LLQENYTNSIDIWSTGCIFAEL 250
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
++HRD+KP NIL+ G +KL DFG++ A Y APE + +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL-----LQST 187
Query: 117 YDIRADVWSLGITLVEL 133
Y D+WS+G E+
Sbjct: 188 YATPVDMWSVGCIFAEM 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC---AAYM 102
+ + YL E ++HRD+ NIL+ E +K+ DFG+S + + + K + +M
Sbjct: 161 QGMQYLAEM-SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
A E + Y ++DVWS G+ L E+ T G PY
Sbjct: 220 AIESL-----FDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 11 WICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALH----------YLKETHGVIHR 60
+I MELMA L L + P P +L+ + LH YL+E H IHR
Sbjct: 109 FILMELMAG--GDLKSFLRETRPRP-SQPSSLAMLDLLHVARDIACGCQYLEENH-FIHR 164
Query: 61 DVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNP-QKPD 116
D+ N LL G K+ DFG++ R + + + GCA M P + PP +
Sbjct: 165 DIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPVKWMPPEAFMEGI 221
Query: 117 YDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ + D WS G+ L E+ + G PY K + EVL V
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 258
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC---AAYM 102
+ + YL E ++HRD+ NIL+ E +K+ DFG+S + + + K + +M
Sbjct: 161 QGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM 219
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
A E + Y ++DVWS G+ L E+ T G PY
Sbjct: 220 AIESL-----FDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 12 ICMELM--ATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHG-VIHRDVKPSNIL 68
+ ME + + RLL + H + + ++ L + Y++ + ++HRD++ NI
Sbjct: 98 MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 69 L---DERGNI--KLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADV 123
L DE + K+ DF +S + V S + G +MAPE I ++ Y +AD
Sbjct: 157 LQSLDENAPVCAKVADFSLSQQSVHSVSGL--LGNFQWMAPETI---GAEEESYTEKADT 211
Query: 124 WSLGITLVELATGEFPYKD 142
+S + L + TGE P+ +
Sbjct: 212 YSFAMILYTILTGEGPFDE 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD 116
++HRD+KP NIL+ G +KL DFG++ A Y APE + +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL-----LQST 187
Query: 117 YDIRADVWSLGITLVEL 133
Y D+WS+G E+
Sbjct: 188 YATPVDMWSVGCIFAEM 204
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 147 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 205
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 206 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 158 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 217 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-AAYMAPE----RIEPP 110
IHRD+ N+L+ E +K+ DFG++ + +D +T N +MAPE RI
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--- 269
Query: 111 NPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
Y ++DVWS G+ L E+ T G PY
Sbjct: 270 ------YTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 143 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 201
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 202 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 150 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 208
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 209 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-AAYMAPE----RIEPP 110
IHRD+ N+L+ E +K+ DFG++ + +D +T N +MAPE RI
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--- 221
Query: 111 NPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
Y ++DVWS G+ L E+ T G PY
Sbjct: 222 ------YTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 158 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 217 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 43 STVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL--VDSKARTKNAGC-A 99
+ + YL + IHRD+ N+L+ E +K+ DFG++ + +D +T N
Sbjct: 158 QVARGMEYLA-SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 100 AYMAPE----RIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MAPE RI Y ++DVWS G+ L E+ T G PY
Sbjct: 217 KWMAPEALFDRI---------YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 57 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA---RTKNAGCAAYMAPERIEPPNPQ 113
+ HRD K N+LL L DFG++ R K G YMAPE +E
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 114 KPDYDIRADVWSLGITLVELAT 135
+ D +R D++++G+ L EL +
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVS 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGC---AAYM 102
+ + YL E ++HRD+ NIL+ E +K+ DFG+S + + + K + +M
Sbjct: 161 QGMQYLAEMK-LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM 219
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
A E + Y ++DVWS G+ L E+ T G PY
Sbjct: 220 AIESL-----FDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 36 ICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTK 94
I +K L + + V+HRD+KP N+L++ G +KL DFG++ + + +
Sbjct: 102 IVKSFLFQLLKGLGFC-HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE---FPYKDCKCDFEVLS 151
Y P+ + Y D+WS G ELA FP D + +
Sbjct: 161 EVVTLWYRPPDVLFGAKL----YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIF 216
Query: 152 RVL 154
R+L
Sbjct: 217 RLL 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAY 101
+ + YL H IHRD+ N+LLD +K+ DFG++ + + + R +
Sbjct: 145 EGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
APE + ++ + +DVWS G+TL EL T
Sbjct: 204 YAPECL-----KEYKFYYASDVWSFGVTLYELLT 232
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 42 LSTVKALHYLKET---------HGVIHRDVKPSNILLDER--GNIKLCDFGISGRLVDSK 90
+S + ++Y+++ H ++H D+KP NI+ + + ++K+ DFG++ +L +
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVL 150
A + APE ++ + D+W++G+ L +G P+ + D E L
Sbjct: 206 IVKVTTATAEFAAPEIVD-----REPVGFYTDMWAIGVLGYVLLSGLSPFA-GEDDLETL 259
Query: 151 SRV 153
V
Sbjct: 260 QNV 262
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 1 MSPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLK-ETHG 56
M+ + + +W+ M + +D L ++ + + C +I LS L +L E G
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 57 ------VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTK-------NAGCAAYMA 103
+ HRD+K NIL+ + G + D G++ ++ S++ + G YMA
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 104 PERI-EPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPP--- 159
PE + E D R D+W+ G+ L E+A V + ++ D P
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR-----------MVSNGIVEDYKPPFY 263
Query: 160 -CLPNDPLF 167
+PNDP F
Sbjct: 264 DVVPNDPSF 272
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 1 MSPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLK-ETHG 56
M+ + + +W+ M + +D L ++ + + C +I LS L +L E G
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 57 ------VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTK-------NAGCAAYMA 103
+ HRD+K NIL+ + G + D G++ ++ S++ + G YMA
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 104 PERI-EPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPP--- 159
PE + E D R D+W+ G+ L E+A V + ++ D P
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR-----------MVSNGIVEDYKPPFY 234
Query: 160 -CLPNDPLF 167
+PNDP F
Sbjct: 235 DVVPNDPSF 243
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKE---------THGVIHRDVKPSNILLDE 71
F R R+ + P TLST LH+ + + IHRDV N+LL
Sbjct: 140 FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199
Query: 72 RGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
K+ DFG+ S +V AR +MAPE I Y +++DVW
Sbjct: 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLP----VKWMAPESIF-----DCVYTVQSDVW 250
Query: 125 SLGITLVEL-ATGEFPY 140
S GI L E+ + G PY
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 1 MSPQSKESDVWICMEL--MATCFDRLLKRLHVSVPEPI-CGKITLSTVKALHYLK-ETHG 56
M+ + + +W+ M + +D L ++ + + C +I LS L +L E G
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 57 ------VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTK-------NAGCAAYMA 103
+ HRD+K NIL+ + G + D G++ ++ S++ + G YMA
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 104 PERI-EPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKCDFEVLSRVLNDAPP--- 159
PE + E D R D+W+ G+ L E+A V + ++ D P
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR-----------MVSNGIVEDYKPPFY 234
Query: 160 -CLPNDPLF 167
+PNDP F
Sbjct: 235 DVVPNDPSF 243
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 50 YLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEP 109
YL H +HRD+ N L+ E +K+ DFG+S R V S + G M P R P
Sbjct: 143 YLASQH-FVHRDLATRNCLVGENLLVKIGDFGMS-RDVYSTDYYRVGGHT--MLPIRWMP 198
Query: 110 PNP-QKPDYDIRADVWSLGITLVELAT-GEFPY 140
P + +DVWSLG+ L E+ T G+ P+
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + G +HRD+ NIL++ K+ DFG+S R+++ +
Sbjct: 157 GMRYLADM-GYVHRDLAARNILVNSNLVCKVSDFGLS-RVIEDDPEAVYTTTGGKIPVRW 214
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPYKD 142
P Q + +DVWS GI + E ++ GE PY D
Sbjct: 215 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 169 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 224
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 273
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 146 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 201
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 250
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 169 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 224
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 273
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 171 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 226
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 275
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 155 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 210
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 259
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + GCA M P
Sbjct: 195 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRAGYYRKGGCA--MLPV 250
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 299
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 161 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 216
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 265
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 29/141 (20%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILL---------------DERG----NIKLCD 79
K+ K++++L ++ + H D+KP NIL DER +IK+ D
Sbjct: 122 KMAYQICKSVNFL-HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 80 FGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG--E 137
FG + D + + Y APE I +P DVWS+G L+E G
Sbjct: 181 FGSAT--YDDEHHSTLVSTRHYRAPEVILALGWSQP-----CDVWSIGCILIEYYLGFTV 233
Query: 138 FPYKDCKCDFEVLSRVLNDAP 158
FP D K ++ R+L P
Sbjct: 234 FPTHDSKEHLAMMERILGPLP 254
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 181 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 236
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 285
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 36/157 (22%)
Query: 6 KESDVWICMELMATCFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPS 65
K ++++ +E+ + F +L R V + E + + + + Y+ + G++HRD+KP+
Sbjct: 128 KFDELYVVLEIADSDFKKLF-RTPVYLTELHIKTLLYNLLVGVKYV-HSAGILHRDLKPA 185
Query: 66 NILLDERGNIKLCDFGISGRLVD-----------------------------SKARTKNA 96
N L+++ ++K+CDFG++ R VD + T +
Sbjct: 186 NCLVNQDCSVKVCDFGLA-RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHV 244
Query: 97 GCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL 133
Y APE I + +Y DVWS+G EL
Sbjct: 245 VTRWYRAPELI----LLQENYTEAIDVWSIGCIFAEL 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + + +HRD+ NIL++ K+ DFG+S L D + P R
Sbjct: 147 GMKYLADMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 107 IEPPNP-QKPDYDIRADVWSLGITLVE-LATGEFPYKD 142
P Q + +DVWS GI + E ++ GE PY D
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 155 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 210
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 259
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + GCA M P
Sbjct: 172 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRAGYYRKGGCA--MLPV 227
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 276
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ R + + + GCA M P
Sbjct: 154 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCA--MLPV 209
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 258
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 149 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 208 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 134 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 193 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 128 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 187 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 185 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 183 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 186 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 185 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 186 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 183 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 190 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 183 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 190 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 130 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 189 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 186 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 125 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 184 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 127 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 186 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 190 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 158 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 217 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 183 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 183 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 125 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 184 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ K ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 118 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 177 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 56 GVIHRDVKPSNILLDERGNIKLCDFGISGRLV-----DSKARTKNAGCA-----AYMAPE 105
G HRD+KP+NILL + G L D G + +A T A +Y APE
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPE 213
Query: 106 RIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ D R DVWSLG L + GE PY
Sbjct: 214 LFSVQS--HCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 12 ICMELMAT-CFDRLLKRLHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLD 70
+ ME + + C L+R + + K + YL + +HRD+ NIL++
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG-SRRCVHRDLAARNILVE 148
Query: 71 ERGNIKLCDFGISGRLVDSK----ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSL 126
++K+ DFG++ L K R + APE + + ++DVWS
Sbjct: 149 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS-----DNIFSRQSDVWSF 203
Query: 127 GITLVELATGEFPYKDCKC 145
G+ L EL F Y D C
Sbjct: 204 GVVLYEL----FTYCDKSC 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAY 101
+ + YL H IHR++ N+LLD +K+ DFG++ + + + R +
Sbjct: 128 EGMAYLHSQH-YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
APE + ++ + +DVWS G+TL EL T
Sbjct: 187 YAPECL-----KEYKFYYASDVWSFGVTLYELLT 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 30 VSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 89
+S E +C I + YL E +HRD+ N L+ E +K+ DFG+S + +
Sbjct: 171 LSCAEQLC--IARQVAAGMAYLSE-RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 90 ---KARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVEL-ATGEFPY 140
KA +A +M PE I Y +DVW+ G+ L E+ + G PY
Sbjct: 228 DYYKADGNDAIPIRWMPPESI-----FYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA----YM 102
+ YL + +HRD+ NIL++ K+ DFG+S L D T +
Sbjct: 159 GMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLNDA 157
APE I + +DVWS GI + E+ T GE PY + + EV+ + +ND
Sbjct: 218 APEAI-----SYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-SNHEVM-KAINDG 266
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----ARTKNAGCAAY 101
K + YL + +HRD+ NIL++ ++K+ DFG++ L K R +
Sbjct: 126 KGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKC 145
APE + + ++DVWS G+ L EL F Y D C
Sbjct: 185 YAPESLS-----DNIFSRQSDVWSFGVVLYEL----FTYCDKSC 219
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----ARTK 94
K + K + YL + +HRD+ N+L++ +K+ DFG++ + K +
Sbjct: 130 KYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 188
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
+ APE + + + I +DVWS G+TL EL T
Sbjct: 189 RDSPVFWYAPECL-----MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----ARTKNAGCAAY 101
K + YL + +HRD+ NIL++ ++K+ DFG++ L K R +
Sbjct: 138 KGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKC 145
APE + + ++DVWS G+ L EL F Y D C
Sbjct: 197 YAPESLS-----DNIFSRQSDVWSFGVVLYEL----FTYCDKSC 231
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 29/141 (20%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILL---------------DERG----NIKLCD 79
K+ K++++L ++ + H D+KP NIL DER +IK+ D
Sbjct: 122 KMAYQICKSVNFL-HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 80 FGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATG--E 137
FG + D + + Y APE I +P DVWS+G L+E G
Sbjct: 181 FGSAT--YDDEHHSTLVXXRHYRAPEVILALGWSQP-----CDVWSIGCILIEYYLGFTV 233
Query: 138 FPYKDCKCDFEVLSRVLNDAP 158
FP D K ++ R+L P
Sbjct: 234 FPTHDSKEHLAMMERILGPLP 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----ARTKNAGCAAY 101
K + YL + +HRD+ NIL++ ++K+ DFG++ L K R +
Sbjct: 122 KGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPYKDCKC 145
APE + + ++DVWS G+ L EL F Y D C
Sbjct: 181 YAPESLS-----DNIFSRQSDVWSFGVVLYEL----FTYCDKSC 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 39 KITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK----ARTK 94
K + K + YL + +HRD+ N+L++ +K+ DFG++ + K +
Sbjct: 118 KYAVQICKGMDYLG-SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 176
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
+ APE + + + I +DVWS G+TL EL T
Sbjct: 177 RDSPVFWYAPECL-----MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 46 KALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----KARTKNAGCAAY 101
+ + YL H IHR++ N+LLD +K+ DFG++ + + + R +
Sbjct: 128 EGMAYLHAQH-YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 102 MAPERIEPPNPQKPDYDIRADVWSLGITLVELAT 135
APE + ++ + +DVWS G+TL EL T
Sbjct: 187 YAPECL-----KEYKFYYASDVWSFGVTLYELLT 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 42 LSTVKALHYLKET---------HGVIHRDVKPSNILLD-ERGN-IKLCDFGISGRLVDSK 90
+S +A+ Y+++ + +H D+KP NI+ +R N +KL DFG++ L +
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ G A + APE E KP D+WS+G+ L +G P+
Sbjct: 206 SVKVTTGTAEFAAPEVAE----GKP-VGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 42 LSTVKALHYLKET---------HGVIHRDVKPSNILLD-ERGN-IKLCDFGISGRLVDSK 90
+S +A+ Y+++ + +H D+KP NI+ +R N +KL DFG++ L +
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 91 ARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGEFPY 140
+ G A + APE E KP D+WS+G+ L +G P+
Sbjct: 312 SVKVTTGTAEFAAPEVAE----GKP-VGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 49 HYLKETHGVIHRDVKPSNILLDERGN---IKLCDFGISGRLVDSKARTKNAGCAAYMAPE 105
YL+E H IHRD+ N LL G K+ DFG++ + + + + GCA M P
Sbjct: 155 QYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA-SYYRKGGCA--MLPV 210
Query: 106 RIEPPNP-QKPDYDIRADVWSLGITLVEL-ATGEFPYKDCKCDFEVLSRV 153
+ PP + + + D WS G+ L E+ + G PY K + EVL V
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-KSNQEVLEFV 259
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA----YM 102
+ YL +H V+H+D+ N+L+ ++ N+K+ D G+ R V + K G + +M
Sbjct: 157 GMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLF-REVYAADYYKLLGNSLLPIRWM 214
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
APE I + I +D+WS G+ L E + G PY
Sbjct: 215 APEAI-----MYGKFSIDSDIWSYGVVLWEVFSYGLQPY 248
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + +HRD+ N ++ E +K+ DFG++ + ++ K G +
Sbjct: 144 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK--GGKGLLPVRW 200
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCL 161
+ P + + + +DVWS G+ L E+AT E PY+ + +VL V+ D P
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNC 259
Query: 162 PNDPLF 167
P D LF
Sbjct: 260 P-DMLF 264
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA----YM 102
+ YL +H V+H+D+ N+L+ ++ N+K+ D G+ R V + K G + +M
Sbjct: 140 GMEYLS-SHHVVHKDLATRNVLVYDKLNVKISDLGLF-REVYAADYYKLLGNSLLPIRWM 197
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
APE I + I +D+WS G+ L E + G PY
Sbjct: 198 APEAI-----MYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 183
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 184 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 36 ICGKITLSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRL-VDSKARTK 94
I +K L + + V+HRD+KP N+L++ G +KL +FG++ + + +
Sbjct: 102 IVKSFLFQLLKGLGFC-HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160
Query: 95 NAGCAAYMAPERIEPPNPQKPDYDIRADVWSLGITLVELATGE---FPYKDCKCDFEVLS 151
Y P+ + Y D+WS G ELA FP D + +
Sbjct: 161 EVVTLWYRPPDVLFGAKL----YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
Query: 152 RVL 154
R+L
Sbjct: 217 RLL 219
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + +HRD+ N ++ E +K+ DFG++ + ++ K G +
Sbjct: 135 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK--GGKGLLPVRW 191
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYK 141
+ P + + + +DVWS G+ L E+AT E PY+
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 183
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 184 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 131 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 188
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 189 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 128 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 185
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 186 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 124 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 181
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 182 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCA-- 99
+ K ++YL E ++HRD+ N+L+ ++K+ DFG +L+ ++ + +A
Sbjct: 126 VQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFG-RAKLLGAEEKEYHAEGGKV 183
Query: 100 --AYMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 184 PIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 11 WICMELMATCFDRLLKR---LHVSVPEPICGKITLSTVKALHYLKETHGVIHRDVKPSNI 67
+I +EL A +++ H+ + + T S + LH L ++HRD+KP NI
Sbjct: 94 YIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL----NIVHRDLKPHNI 149
Query: 68 LL---DERGNIK--LCDFGISGRLVDSK----ARTKNAGCAAYMAPERIEPPNPQKPDYD 118
L+ + G IK + DFG+ +L + R+ G ++APE + + P Y
Sbjct: 150 LISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYT 209
Query: 119 IRADVWSLG-ITLVELATGEFPY 140
+ D++S G + ++ G P+
Sbjct: 210 V--DIFSAGCVFYYVISEGSHPF 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + +HRD+ N ++ E +K+ DFG++ + ++ K G +
Sbjct: 144 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRW 200
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCL 161
+ P + + + +DVWS G+ L E+AT E PY+ + +VL V+ D P
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNC 259
Query: 162 PNDPLF 167
P D LF
Sbjct: 260 P-DMLF 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 5 SKESDVWICMELMATC-FDRLLK----RLHVSVPEPICGKITLSTVKALHYLKETHGVIH 59
+++ ++I MEL+ F L+ RL V + G + YL E+ IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG----DAAAGMEYL-ESKCCIH 236
Query: 60 RDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPD--- 116
RD+ N L+ E+ +K+ DFG+S R + G A R P P+
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMS--------REEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 117 ---YDIRADVWSLGITLVE-LATGEFPYKD 142
Y +DVWS GI L E + G PY +
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYPN 318
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 21 FDRLLKRLHVSVPEPICGKITLSTVKALHYLKE---------THGVIHRDVKPSNILLDE 71
F R R+ + P T ST LH+ + + IHRDV N+LL
Sbjct: 140 FLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199
Query: 72 RGNIKLCDFGI-------SGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDYDIRADVW 124
K+ DFG+ S +V AR +MAPE I Y +++DVW
Sbjct: 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLP----VKWMAPESIF-----DCVYTVQSDVW 250
Query: 125 SLGITLVEL-ATGEFPY 140
S GI L E+ + G PY
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
+HRD+ N ++ E +K+ DFG++ + ++ K G + + P + + +
Sbjct: 182 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVF 239
Query: 118 DIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCLPNDPLF 167
+DVWS G+ L E+AT E PY+ + +VL V+ D P P D LF
Sbjct: 240 TTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCP-DMLF 292
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
+HRD+ N ++ E +K+ DFG++ + ++ K G + + P + + +
Sbjct: 150 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVF 207
Query: 118 DIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCLPNDPLF 167
+DVWS G+ L E+AT E PY+ + +VL V+ D P P D LF
Sbjct: 208 TTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCP-DMLF 260
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + +HRD+ N ++ E +K+ DFG++ + ++ K G +
Sbjct: 141 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRW 197
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCL 161
+ P + + + +DVWS G+ L E+AT E PY+ + +VL V+ D P
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNC 256
Query: 162 PNDPLF 167
P D LF
Sbjct: 257 P-DMLF 261
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 42 LSTVKALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAA- 100
+ + ++YL E ++HRD+ N+L+ ++K+ DFG++ L + G
Sbjct: 121 VQIAEGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 101 --YMAPERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
+MA E I Y ++DVWS G+T+ EL T G PY
Sbjct: 180 IKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 136 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPY 140
APE I + +DVWS GI + E+ + GE PY
Sbjct: 195 APEAI-----AFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 130 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 189 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 130 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 189 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPER 106
+ YL + +HRD+ N ++ E +K+ DFG++ + ++ K G +
Sbjct: 137 GMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRW 193
Query: 107 IEPPNPQKPDYDIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCL 161
+ P + + + +DVWS G+ L E+AT E PY+ + +VL V+ D P
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNC 252
Query: 162 PNDPLF 167
P D LF
Sbjct: 253 P-DMLF 257
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 159 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 218 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 47 ALHYLKETHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--SKARTKNAGC--AAYM 102
+ YL + G +HRD+ NIL++ K+ DFG+S L D A T G +
Sbjct: 147 GMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 103 APERIEPPNPQKPDYDIRADVWSLGITLVE-LATGEFPY 140
+PE I + +DVWS GI L E ++ GE PY
Sbjct: 206 SPEAI-----AYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 58 IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKARTKNAGCAAYMAPERIEPPNPQKPDY 117
+HRD+ N ++ E +K+ DFG++ + ++ K G + + P + + +
Sbjct: 153 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVF 210
Query: 118 DIRADVWSLGITLVELAT-GEFPYKDCKCDFEVLSRVLN----DAPPCLPNDPLF 167
+DVWS G+ L E+AT E PY+ + +VL V+ D P P D LF
Sbjct: 211 TTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCP-DMLF 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,321,041
Number of Sequences: 62578
Number of extensions: 326199
Number of successful extensions: 2904
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 899
Number of HSP's gapped (non-prelim): 1123
length of query: 296
length of database: 14,973,337
effective HSP length: 98
effective length of query: 198
effective length of database: 8,840,693
effective search space: 1750457214
effective search space used: 1750457214
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)