Query psy3688
Match_columns 286
No_of_seqs 226 out of 1844
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 23:04:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 3.5E-34 1.2E-38 266.9 16.9 199 84-283 31-238 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 1.4E-33 4.8E-38 262.1 19.4 199 85-283 40-239 (500)
3 4amj_A Beta-1 adrenergic recep 100.0 3.8E-32 1.3E-36 236.1 15.0 202 83-284 9-211 (315)
4 3uon_A Human M2 muscarinic ace 100.0 1E-31 3.5E-36 246.2 18.4 195 86-284 24-220 (467)
5 1u19_A Rhodopsin; G protein-co 100.0 4.8E-32 1.6E-36 239.2 15.3 194 83-283 36-237 (349)
6 4dkl_A MU-type opioid receptor 100.0 4.1E-32 1.4E-36 248.5 14.9 200 84-284 16-215 (464)
7 2ks9_A Substance-P receptor; w 100.0 6.9E-31 2.4E-35 233.5 19.6 194 86-281 33-227 (364)
8 3vw7_A Proteinase-activated re 100.0 2.5E-31 8.4E-36 244.9 17.2 196 82-283 17-221 (484)
9 4ea3_A Fusion protein of nocic 100.0 6.7E-31 2.3E-35 239.7 18.6 199 83-282 123-321 (434)
10 3odu_A C-X-C chemokine recepto 100.0 1.6E-31 5.5E-36 247.3 14.4 192 84-284 47-243 (502)
11 3rze_A Histamine H1 receptor, 100.0 1.7E-31 5.8E-36 243.8 14.0 193 88-284 11-205 (452)
12 3sn6_R Lysozyme, beta-2 adrene 100.0 5.8E-31 2E-35 245.2 16.3 200 85-284 182-382 (514)
13 2z73_A Rhodopsin; visual pigme 100.0 5.7E-31 2E-35 240.8 15.6 195 84-284 33-234 (448)
14 3v2y_A Sphingosine 1-phosphate 100.0 2.7E-30 9.4E-35 241.1 19.8 185 86-281 64-250 (520)
15 3pbl_A D(3) dopamine receptor, 100.0 7.5E-31 2.5E-35 241.5 14.9 188 86-283 39-230 (481)
16 2lnl_A C-X-C chemokine recepto 100.0 1E-30 3.6E-35 226.4 14.8 195 86-284 12-208 (296)
17 3eml_A Human adenosine A2A rec 100.0 1.2E-30 4.1E-35 240.2 14.5 196 86-284 22-226 (488)
18 4eiy_A Adenosine receptor A2A/ 100.0 1.5E-30 5.1E-35 237.2 12.8 198 84-284 30-236 (447)
19 1hll_A Alpha-2A adrenergic rec 98.7 2.8E-09 9.4E-14 59.7 1.4 30 171-200 2-31 (32)
20 2lot_A Apelin receptor; membra 96.6 0.00012 4.2E-09 47.0 -2.0 29 87-115 30-58 (64)
21 2rdd_B UPF0092 membrane protei 80.0 2.2 7.5E-05 23.8 3.4 26 260-285 6-32 (37)
22 2ks1_B Epidermal growth factor 35.1 53 0.0018 18.9 3.5 16 271-286 29-44 (44)
23 2l2t_A Receptor tyrosine-prote 23.3 1.1E+02 0.0039 17.5 3.6 16 271-286 28-43 (44)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-34 Score=266.87 Aligned_cols=199 Identities=23% Similarity=0.348 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhheeecCcc---cchhHHHHHHHHHHhhHhhhhchhHHHHHHHh--hccccccchh
Q psy3688 84 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKL---RVITNYFVVSLAFADMLVAFGAMGFNLSVEIF--NRWLFGYFMC 158 (286)
Q Consensus 84 ~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~---~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~--~~~~~g~~~C 158 (286)
..++..+++.+++++|++||+++++++.++|++ ++++|+|++|||++|++++++.+|+.+..... +.|.+|+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 345566788999999999999999999887654 47899999999999999999999998876654 5799999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccC
Q psy3688 159 DVWNSLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHN 238 (286)
Q Consensus 159 ~~~~~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
++..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++. +.............
T Consensus 111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~ 189 (510)
T 4grv_A 111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFT-MGLQNRSADGTHPG 189 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHH-EEEEECSSSSCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHh-hcccccccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988873 32111111111111
Q ss_pred CCccee----eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy3688 239 PNSCIF----VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 283 (286)
Q Consensus 239 ~~~c~~----~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~ 283 (286)
...|.. .....|..+..++.|++|+++|+++|.+|++.++++.++
T Consensus 190 ~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~ 238 (510)
T 4grv_A 190 GLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNI 238 (510)
T ss_dssp GEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTH
T ss_pred ccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhh
Confidence 222332 223456677788889999999999999999999887654
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.4e-33 Score=262.05 Aligned_cols=199 Identities=36% Similarity=0.778 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHH
Q psy3688 85 ITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSL 164 (286)
Q Consensus 85 ~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~ 164 (286)
..+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|+.+.....+.|.+|...|++..++
T Consensus 40 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~ 119 (500)
T 2rh1_A 40 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSI 119 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHH
Confidence 34556889999999999999999999999999999999999999999999998999999888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-cccccCCCcce
Q psy3688 165 DVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQ-LFRSHNPNSCI 243 (286)
Q Consensus 165 ~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~-~~~~~~~~~c~ 243 (286)
..++..+|++++++||+|||+||++|++|++.++++++..+++++|+++++++++|.+.++....... ..|......|.
T Consensus 120 ~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 199 (500)
T 2rh1_A 120 DVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD 199 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccccc
Confidence 99999999999999999999999999999999999999999999999999999777765553322111 11221222223
Q ss_pred eeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy3688 244 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 283 (286)
Q Consensus 244 ~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~ 283 (286)
......|.+...++.|++|+++|+++|.+|++.+||+.++
T Consensus 200 ~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 200 FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345667778888889999999999999999999998776
No 3
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.98 E-value=3.8e-32 Score=236.14 Aligned_cols=202 Identities=39% Similarity=0.758 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhH
Q psy3688 83 LLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWN 162 (286)
Q Consensus 83 ~~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~ 162 (286)
.......+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++..+|..+.....+.|.+|+..|++..
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 34456668889999999999999999999999999999999999999999999889999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccc-cccccccCCCc
Q psy3688 163 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHA-HQLFRSHNPNS 241 (286)
Q Consensus 163 ~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 241 (286)
++..++..+|++++++||+|||++|++|++|++.++++++...++++|+++++.+.+|.+..+..... ....|......
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 168 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC 168 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcccccccccc
Confidence 99999999999999999999999999999999989999999999999999999999888754332222 11222223333
Q ss_pred ceeeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 242 CIFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 242 c~~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
|+......|.....++.+++|+++++++|.+|++.+||+.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~ 211 (315)
T 4amj_A 169 CDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKI 211 (315)
T ss_dssp CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----
T ss_pred chhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444556677777788889999999999999999998876553
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.98 E-value=1e-31 Score=246.25 Aligned_cols=195 Identities=26% Similarity=0.537 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 165 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~ 165 (286)
.+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+.....+.|.+|+..|++..++.
T Consensus 24 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 103 (467)
T 3uon_A 24 VFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALD 103 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHH
Confidence 45567889999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCccee-
Q psy3688 166 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCIF- 244 (286)
Q Consensus 166 ~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c~~- 244 (286)
.++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+++. +....... ......|..
T Consensus 104 ~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~-~~~~~~~~---~~~~~~C~~~ 179 (467)
T 3uon_A 104 YVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILF-WQFIVGVR---TVEDGECYIQ 179 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHSCC---CCCSSCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-hhhccccc---CCCCCcceee
Confidence 9999999999999999999999999999999999999999999999999999988764 32211110 112233442
Q ss_pred -eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 245 -VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 245 -~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
.....|.+...++.|++|+++|+++|.+|++.+||+.++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 220 (467)
T 3uon_A 180 FFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIF 220 (467)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 2344677788888999999999999999999999987654
No 5
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.98 E-value=4.8e-32 Score=239.18 Aligned_cols=194 Identities=19% Similarity=0.395 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhH
Q psy3688 83 LLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWN 162 (286)
Q Consensus 83 ~~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~ 162 (286)
....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.++..+|..+.....+.|..|+..|++..
T Consensus 36 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 115 (349)
T 1u19_A 36 WQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEG 115 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHH
Confidence 34456668889999999999999999999999999999999999999999999988999888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcc
Q psy3688 163 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC 242 (286)
Q Consensus 163 ~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c 242 (286)
++..++..+|++++++||+|||+||++|+++++ ++++++...++++|+++++.++|+.+ ++.....+. ....|
T Consensus 116 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~~~~-----~~~~C 188 (349)
T 1u19_A 116 FFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLV-GWSRYIPEG-----MQCSC 188 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGT-TSSCCEEET-----TTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHH-heeeeeccC-----Cceee
Confidence 999999999999999999999999999999877 68999999999999999999988875 343222111 11223
Q ss_pred ee--------eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy3688 243 IF--------VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 283 (286)
Q Consensus 243 ~~--------~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~ 283 (286)
.. .....|.....++.+++|+++++++|.+|++++||++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 237 (349)
T 1u19_A 189 GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQ 237 (349)
T ss_dssp ECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCS
T ss_pred cccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 21 123456667777888999999999999999999877653
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.98 E-value=4.1e-32 Score=248.52 Aligned_cols=200 Identities=22% Similarity=0.367 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHH
Q psy3688 84 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 163 (286)
Q Consensus 84 ~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~ 163 (286)
...+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++. +|+.+.....+.|.+|...|++..+
T Consensus 16 ~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~ 94 (464)
T 4dkl_A 16 TAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVIS 94 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHH
Confidence 345666889999999999999999999999999999999999999999999886 8998888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcce
Q psy3688 164 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI 243 (286)
Q Consensus 164 ~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 243 (286)
+..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+++............|........
T Consensus 95 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 174 (464)
T 4dkl_A 95 IDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPT 174 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcc
Confidence 99999999999999999999999999999999999999999999999999999988886433322222211111111111
Q ss_pred eeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 244 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 244 ~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
......|.+...++.+++|+++|+++|.+|++.+||++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~ 215 (464)
T 4dkl_A 175 WYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIF 215 (464)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 11234566777788899999999999999999998877643
No 7
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=6.9e-31 Score=233.54 Aligned_cols=194 Identities=23% Similarity=0.470 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 165 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~ 165 (286)
.+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++..+|..+.....+.|..|+..|++..++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 44467888999999999999999999999999999999999999999999888999888888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcc-ee
Q psy3688 166 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC-IF 244 (286)
Q Consensus 166 ~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c-~~ 244 (286)
.++..+|++++++||+|||+||++|++|+ .+++++...++++|+++++.++|+.+............|....... ..
T Consensus 113 ~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~ 190 (364)
T 2ks9_A 113 IAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNK 190 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchh
Confidence 99999999999999999999999999976 4888889999999999999998776432222111111111111000 00
Q ss_pred eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3688 245 VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQE 281 (286)
Q Consensus 245 ~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~ 281 (286)
.....|.....++.+++|+++++++|.+|++.+||++
T Consensus 191 ~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~ 227 (364)
T 2ks9_A 191 IYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASE 227 (364)
T ss_dssp TTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1223566677788899999999999999999987654
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=244.91 Aligned_cols=196 Identities=22% Similarity=0.254 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHh-hccccccchhHH
Q psy3688 82 SLLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIF-NRWLFGYFMCDV 160 (286)
Q Consensus 82 ~~~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~-~~~~~g~~~C~~ 160 (286)
.....+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.++. +|........ +.|.+|+..|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 34456667899999999999999999999999999999999999999999999775 5555544444 489999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCC
Q psy3688 161 WNSLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPN 240 (286)
Q Consensus 161 ~~~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (286)
..++..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++. +....... ....
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~-~~~~~~~~----~~~~ 170 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLK-EQTIQVPG----LGIT 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTS-CCEEEETT----TTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHh-hhccccCC----CCCc
Confidence 999999999999999999999999999999999999999999999999999999999888863 32211110 0112
Q ss_pred cceee--------ccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy3688 241 SCIFV--------VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 283 (286)
Q Consensus 241 ~c~~~--------~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~ 283 (286)
.|... ....|.....++.|++|+++|+++|.+|++.+||++++
T Consensus 171 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~ 221 (484)
T 3vw7_A 171 TCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANI 221 (484)
T ss_dssp EESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCH
T ss_pred eeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHH
Confidence 23211 11225566778889999999999999999999988864
No 9
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.97 E-value=6.7e-31 Score=239.73 Aligned_cols=199 Identities=23% Similarity=0.338 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhH
Q psy3688 83 LLITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWN 162 (286)
Q Consensus 83 ~~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~ 162 (286)
....+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++. ++.+|..+.....+.|..|...|++..
T Consensus 123 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~ 201 (434)
T 4ea3_A 123 GLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVI 201 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHH
Confidence 3455666888899999999999999999999999999999999999999998 557898888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcc
Q psy3688 163 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC 242 (286)
Q Consensus 163 ~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c 242 (286)
++..++..+|++++++||+|||++|++|++|++.++++++..+++++|+++++.++|+.+.+..........|.......
T Consensus 202 ~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~ 281 (434)
T 4ea3_A 202 AIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTP 281 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCCh
Confidence 99999999999999999999999999999999999999999999999999999998888754433322211111111100
Q ss_pred eeeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy3688 243 IFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEH 282 (286)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~ 282 (286)
.......|.....++.+++|+++++++|.+|++.+||+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~ 321 (434)
T 4ea3_A 282 QDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRL 321 (434)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 1112345667778888999999999999999999987653
No 10
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.97 E-value=1.6e-31 Score=247.25 Aligned_cols=192 Identities=21% Similarity=0.333 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHH
Q psy3688 84 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 163 (286)
Q Consensus 84 ~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~ 163 (286)
...+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+ +.+|+.+.... .+|.+|+..|++..+
T Consensus 47 ~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~~~~~~~~~C~~~~~ 124 (502)
T 3odu_A 47 NKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKAVHV 124 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-TCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCcCCchhhhhHHH
Confidence 3455668899999999999999999999999999999999999999999996 47888776554 489999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcce
Q psy3688 164 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI 243 (286)
Q Consensus 164 ~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 243 (286)
+..++..+|++++++||+|||+||++|++|++.++++++..+++++|++++++++|+++........ ....|.
T Consensus 125 ~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~-------~~~~C~ 197 (502)
T 3odu_A 125 IYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEAD-------DRYICD 197 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECS-------SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccC-------CceEEe
Confidence 9999999999999999999999999999999999999999999999999999999888643222211 222343
Q ss_pred e-----eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 244 F-----VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 244 ~-----~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
. .....|.+...++.+++|+++|+++|.+|++.+||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 243 (502)
T 3odu_A 198 RFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNI 243 (502)
T ss_dssp ECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCH
T ss_pred ecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 2 2234466667788899999999999999999999987664
No 11
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=243.77 Aligned_cols=193 Identities=27% Similarity=0.510 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHHHH
Q psy3688 88 KILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLDVY 167 (286)
Q Consensus 88 ~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~~~ 167 (286)
..+++.+++++|++||+++++++.++|++|++.|+|++|||++|++.++..+|..+.....+.|.+|...|++..++..+
T Consensus 11 ~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 90 (452)
T 3rze_A 11 LVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYV 90 (452)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHH
Confidence 34788899999999999999999999999999999999999999999998999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcce--ee
Q psy3688 168 FSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCI--FV 245 (286)
Q Consensus 168 ~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c~--~~ 245 (286)
+..+|++++++||+|||++|++|++|++.++++++..+++++|+++++.++|.+ ++........ ......|. ..
T Consensus 91 ~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~--~~~~~~~~~~--~~~~~~C~~~~~ 166 (452)
T 3rze_A 91 ASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPIL--GWNHFMQQTS--VRREDKCETDFY 166 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHH--CCCC---------CCSSSSCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHH--HHHhcccccc--cCCCCeecCCCc
Confidence 999999999999999999999999999999999999999999999999987644 3322222111 11223343 23
Q ss_pred ccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 246 VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 246 ~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
....|.....++.+++|+++|+++|.+|++.+||+.++.
T Consensus 167 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~ 205 (452)
T 3rze_A 167 DVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIF 205 (452)
T ss_dssp TCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 345577778888999999999999999999999887653
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=5.8e-31 Score=245.19 Aligned_cols=200 Identities=36% Similarity=0.762 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHH
Q psy3688 85 ITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSL 164 (286)
Q Consensus 85 ~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~ 164 (286)
..+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..++
T Consensus 182 ~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l 261 (514)
T 3sn6_R 182 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSI 261 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHH
Confidence 34556888999999999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc-ccccCCCcce
Q psy3688 165 DVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQL-FRSHNPNSCI 243 (286)
Q Consensus 165 ~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~-~~~~~~~~c~ 243 (286)
..++..+|++++++||+|||++|++|++|++.++++++..+++++|+++++++++|.+.++........ .|......+.
T Consensus 262 ~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~ 341 (514)
T 3sn6_R 262 DVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCD 341 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccc
Confidence 999999999999999999999999999999989999999999999999999998888665543332211 1221222223
Q ss_pred eeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 244 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 244 ~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
......|.....++.+++|+++|+++|.+|++.+||+.+++
T Consensus 342 ~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 382 (514)
T 3sn6_R 342 FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKI 382 (514)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34456677888889999999999999999999998876553
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=5.7e-31 Score=240.84 Aligned_cols=195 Identities=25% Similarity=0.450 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhh-chhHHHHHHHhhccccccchhHHhH
Q psy3688 84 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFG-AMGFNLSVEIFNRWLFGYFMCDVWN 162 (286)
Q Consensus 84 ~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~-~~p~~~~~~~~~~~~~g~~~C~~~~ 162 (286)
...+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++ .+|..+.....+.|.+|+..|++..
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 112 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYG 112 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHH
Confidence 344556788899999999999999999999999999999999999999999886 4888888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcc
Q psy3688 163 SLDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSC 242 (286)
Q Consensus 163 ~~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c 242 (286)
++..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++++++ ++.....+. ....|
T Consensus 113 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~-----~~~~c 186 (448)
T 2z73_A 113 FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIF-GWGAYTLEG-----VLCNC 186 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGG-TSSCEEECT-----TSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHh-ceeeeeecC-----CceeE
Confidence 999999999999999999999999999999999999999999999999999999988776 343222111 12233
Q ss_pred eee------ccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 243 IFV------VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 243 ~~~------~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
... ....+.....++.+++|+++++++|.+|++.+||++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 234 (448)
T 2z73_A 187 SFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEM 234 (448)
T ss_dssp EECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred ecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 123455666677789999999999999999998876543
No 14
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.97 E-value=2.7e-30 Score=241.09 Aligned_cols=185 Identities=20% Similarity=0.349 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 165 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~ 165 (286)
.+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++++++.+|..+.. ....|..+...|++..++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 556689999999999999999999999999999999999999999999999888877655 6678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcceee
Q psy3688 166 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNSCIFV 245 (286)
Q Consensus 166 ~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 245 (286)
.++.++|++++++||+|||+||+ |++|+..++++++..+++++|++++++++||++ ++..... ...|...
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~--------~~~C~~~ 212 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIM-GWNCISA--------LSSCSTV 212 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTT-TCBCTTC--------GGGBCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHH-eeccccC--------CCccccc
Confidence 99999999999999999999999 999999999999999999999999999998886 4543321 2234322
Q ss_pred c--cceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy3688 246 V--NRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQE 281 (286)
Q Consensus 246 ~--~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~ 281 (286)
+ ...+.....++.|++|+++|++||.+|++.+||++
T Consensus 213 ~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 213 LPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp STTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 22223344556799999999999999999999886
No 15
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.97 E-value=7.5e-31 Score=241.52 Aligned_cols=188 Identities=37% Similarity=0.612 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHh-hccccccchhHHhHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIF-NRWLFGYFMCDVWNSL 164 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~-~~~~~g~~~C~~~~~~ 164 (286)
.+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|..+..... +.|.+|...|++..++
T Consensus 39 ~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~ 118 (481)
T 3pbl_A 39 AYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTL 118 (481)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHH
Confidence 344578889999999999999999999999999999999999999999998899988876666 6899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccc---cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCc
Q psy3688 165 DVYFSSASILHLCCISVDRYYAIVQPLDY---HLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNPNS 241 (286)
Q Consensus 165 ~~~~~~~S~~~l~~Is~dRy~aI~~P~~~---~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
..++..+|++++++||+|||++|++|++| .+..+++++..+++++|++++++++|+++ ++.... ....
T Consensus 119 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~--------~~~~ 189 (481)
T 3pbl_A 119 DVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLF-GFNTTG--------DPTV 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCS--------STTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHh-eecccC--------CCCc
Confidence 99999999999999999999999999998 56778899999999999999999988776 333221 2233
Q ss_pred ceeeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy3688 242 CIFVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHM 283 (286)
Q Consensus 242 c~~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~ 283 (286)
|... ...|.....++.+++|+++++++|.+|++.+||++++
T Consensus 190 C~~~-~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~ 230 (481)
T 3pbl_A 190 CSIS-NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRK 230 (481)
T ss_dssp CSCC-CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cccc-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4432 2346677788889999999999999999999988765
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=226.35 Aligned_cols=195 Identities=22% Similarity=0.335 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 165 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~ 165 (286)
.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ .+|...... ..+|..|+..|+...++.
T Consensus 12 ~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~~~~~~~~~c~~~~~~~ 89 (296)
T 2lnl_A 12 YVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVSLLK 89 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSSCCSSHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cCCCccchhHHHHHhhhh
Confidence 344578889999999999999999999999999999999999999999887 566665443 467999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCC--Ccce
Q psy3688 166 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQLFRSHNP--NSCI 243 (286)
Q Consensus 166 ~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~~~~~~~~--~~c~ 243 (286)
.++..+|++++++||+|||+||++|++|+.. .+++...+++++|+.+++.++|+.+. +...+.+.....+.. ....
T Consensus 90 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~-~~~~~~~~~~~~W~~s~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~ 167 (296)
T 2lnl_A 90 EVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLF-RQAYHPNNSSPVCYEVLGNDT 167 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCSSSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHT-SSCCCCCTTSCCCCSCCSCCT
T ss_pred hhhHHHHHHHHHHHHhhhhhhhhhccccchh-hhhhhHheehHHHHHHHHHhcchhhc-ceeecCCCCCceeeeeccccc
Confidence 9999999999999999999999999998775 44667778889999999999888764 322222111111111 1111
Q ss_pred eeccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 244 FVVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 244 ~~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
......+......+.+++|+.++..+|.++.++++|++++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~~~ 208 (296)
T 2lnl_A 168 AKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQ 208 (296)
T ss_dssp TTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCCHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 12334566777788899999999999999999887665544
No 17
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.97 E-value=1.2e-30 Score=240.23 Aligned_cols=196 Identities=29% Similarity=0.467 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHHHH
Q psy3688 86 TLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNSLD 165 (286)
Q Consensus 86 ~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~~~ 165 (286)
.+..+++.+++++|++||+++++++.++|++|+++|+|++|||++|++.+++.+|+.+... ..|..+...|++..++.
T Consensus 22 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~ 99 (488)
T 3eml_A 22 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFV 99 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHH
Confidence 3445788899999999999999999999999999999999999999999988899877543 37888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccc------cccccCC
Q psy3688 166 VYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQ------LFRSHNP 239 (286)
Q Consensus 166 ~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~------~~~~~~~ 239 (286)
.++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+++ ++....... ..|....
T Consensus 100 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 178 (488)
T 3eml_A 100 LVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGEGQ 178 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGG-TCCSSCC-------CCSSCTTC
T ss_pred HHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999988876 443222111 1122222
Q ss_pred Cccee---eccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 240 NSCIF---VVNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 240 ~~c~~---~~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
..|.. .....+.+...++.+++|+++|+++|.+|++.+||+.++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~ 226 (488)
T 3eml_A 179 VACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIF 226 (488)
T ss_dssp EECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred ceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 22221 1223455566788899999999999999999999987764
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.97 E-value=1.5e-30 Score=237.22 Aligned_cols=198 Identities=28% Similarity=0.429 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhheeecCcccchhHHHHHHHHHHhhHhhhhchhHHHHHHHhhccccccchhHHhHH
Q psy3688 84 LITLKILLMLFIIVSAIFGNLLVIVSVMRHRKLRVITNYFVVSLAFADMLVAFGAMGFNLSVEIFNRWLFGYFMCDVWNS 163 (286)
Q Consensus 84 ~~~~~~~~~~~i~~~gi~gN~lvl~~~~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~g~~~C~~~~~ 163 (286)
...+..+++.+++++|++||+++++++.++|++|+++|++++|||++|++.++..+|..+.. ...|..+...|++..+
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~--~~~~~~~~~~C~~~~~ 107 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI--STGFCAACHGCLFIAC 107 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHH--HTTCEEEHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCccHHHHHHH
Confidence 44566688999999999999999999999999999999999999999999988889987753 3477789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhccccccc------ccccc
Q psy3688 164 LDVYFSSASILHLCCISVDRYYAIVQPLDYHLIMTKSRLLIMLCIVWLSPALVSFLPIFLGWYTTHAHQ------LFRSH 237 (286)
Q Consensus 164 ~~~~~~~~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~l~~~~~~~~~~~~~~~~~------~~~~~ 237 (286)
+..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|+.+ ++....... ..|..
T Consensus 108 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 186 (447)
T 4eiy_A 108 FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQPKEGKNHSQGCGE 186 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGG-TCSSTTSCCHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhh-eeccccccCccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999988876 443222111 11111
Q ss_pred CCCcceee---ccceehhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy3688 238 NPNSCIFV---VNRIYCVVSSCVSFWIPGVIMIYMYYQIYKEADRQEHML 284 (286)
Q Consensus 238 ~~~~c~~~---~~~~~~~~~~~~~~~iPl~vi~~~y~~I~~~l~~~~~~~ 284 (286)
....|... ....+.....++.+++|+++++++|.+|++.+||+.++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~ 236 (447)
T 4eiy_A 187 GQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADL 236 (447)
T ss_dssp TEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22223211 122334444566788999999999999999999987765
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.72 E-value=2.8e-09 Score=59.74 Aligned_cols=30 Identities=50% Similarity=0.943 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccchhh
Q psy3688 171 ASILHLCCISVDRYYAIVQPLDYHLIMTKS 200 (286)
Q Consensus 171 ~S~~~l~~Is~dRy~aI~~P~~~~~~~~~~ 200 (286)
+|++++++||+|||+||++|++|+..++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999988877654
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.60 E-value=0.00012 Score=47.03 Aligned_cols=29 Identities=24% Similarity=0.392 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhheeecCc
Q psy3688 87 LKILLMLFIIVSAIFGNLLVIVSVMRHRK 115 (286)
Q Consensus 87 ~~~~~~~~i~~~gi~gN~lvl~~~~~~~~ 115 (286)
+..++|++++++|++||+++++++.++|.
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 45588999999999999999999987765
No 21
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=80.04 E-value=2.2 Score=23.75 Aligned_cols=26 Identities=12% Similarity=0.287 Sum_probs=17.5
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhhhhhc
Q psy3688 260 WIPGVIM-IYMYYQIYKEADRQEHMLF 285 (286)
Q Consensus 260 ~iPl~vi-~~~y~~I~~~l~~~~~~~~ 285 (286)
++|++++ ++.|..+.|--+|+.|+..
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~ 32 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHK 32 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3455544 6678888888777777654
No 22
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=35.12 E-value=53 Score=18.89 Aligned_cols=16 Identities=19% Similarity=-0.056 Sum_probs=8.5
Q ss_pred HHHHHHHHHhhhhhcC
Q psy3688 271 YQIYKEADRQEHMLFR 286 (286)
Q Consensus 271 ~~I~~~l~~~~~~~~r 286 (286)
..++..+||++++.+|
T Consensus 29 ~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 29 LGIGLFMRRRHIVRKR 44 (44)
T ss_dssp HHHHHHHHTTTCCSCC
T ss_pred HHHHHHhhhhHhhccC
Confidence 4445556666555443
No 23
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=23.32 E-value=1.1e+02 Score=17.47 Aligned_cols=16 Identities=13% Similarity=-0.074 Sum_probs=8.5
Q ss_pred HHHHHHHHHhhhhhcC
Q psy3688 271 YQIYKEADRQEHMLFR 286 (286)
Q Consensus 271 ~~I~~~l~~~~~~~~r 286 (286)
..++..+||++++.+|
T Consensus 28 ~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 28 LTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHTTCSSCCC
T ss_pred HHHHHHhhhhhhhhcc
Confidence 4455556665555443
Done!