BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy369
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W0K0|JIP1_DROME JNK-interacting protein 1 OS=Drosophila melanogaster GN=Aplip1 PE=1
SV=2
Length = 490
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Query: 2 GVNLRTGRQGIFPSAYAVDVEYEDLQTTTPKPKRERFLLGYLGSVETSAHKGNAVICQAV 61
GVNLRTGRQGIFPSAYAVD++Y + T K+ER+LLGYLGSVET AHKG V+CQAV
Sbjct: 311 GVNLRTGRQGIFPSAYAVDLDYNEFDPTVQLVKKERYLLGYLGSVETLAHKGTGVVCQAV 370
Query: 62 HKI-RQTQHRP--HSCILEVSDEGLRMVEKSRPTSS 94
KI + + P +CILEVSD+GLRMV++S P +
Sbjct: 371 RKIVGEYGNSPTGQTCILEVSDQGLRMVDRSGPNQN 406
>sp|Q9UQF2|JIP1_HUMAN C-Jun-amino-terminal kinase-interacting protein 1 OS=Homo sapiens
GN=MAPK8IP1 PE=1 SV=1
Length = 711
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 2 GVNLRTGRQGIFPSAYAVDV--EYEDLQTTTPKPKR-ERFLLGYLGSVETSAHKGNAVIC 58
N+RTG +G+FP+ YA++V E E + ++F + +LGSV+ HKGN V+C
Sbjct: 528 AYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLC 587
Query: 59 QAVHKIRQTQ------HRPHSCILEVSDEGLRMVEKSRPTSSVSGT 98
A+ KI T+ + P SC+LE+S G+++ K+ + G
Sbjct: 588 AAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGN 633
>sp|Q9ERE9|JIP2_MOUSE C-Jun-amino-terminal kinase-interacting protein 2 OS=Mus musculus
GN=Mapk8ip2 PE=1 SV=1
Length = 830
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 2 GVNLRTGRQGIFPS--AYAVDVEYEDLQTTTPKPKR-ERFLLGYLGSVETSAHKGNAVIC 58
G N+RTG +G+FP+ A+AV +DL + P +RF + +LGSVE H+GN ++C
Sbjct: 650 GFNMRTGERGVFPAFYAHAVPGPAKDLLGSKRSPCWVDRFDVQFLGSVEVPCHQGNGILC 709
Query: 59 QAVHKI----RQTQH--RPHSCILEVSDEGLRM 85
A+ KI + T H P SC LE+S G+++
Sbjct: 710 AAMQKIATARKLTVHLRPPASCDLEISLRGVKL 742
>sp|Q9WVI9|JIP1_MOUSE C-Jun-amino-terminal kinase-interacting protein 1 OS=Mus musculus
GN=Mapk8ip1 PE=1 SV=2
Length = 707
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 4 NLRTGRQGIFPSAYAVDV--EYEDLQTTTPKPKR-ERFLLGYLGSVETSAHKGNAVICQA 60
N+RTG +G+FP+ YA++V E E + ++F + +LGSV+ HKGN V+C A
Sbjct: 526 NMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWIDQFRVKFLGSVQVPYHKGNDVLCAA 585
Query: 61 VHKIRQTQ------HRPHSCILEVSDEGLRM 85
+ KI T+ + P SC+LE+S G+++
Sbjct: 586 MQKIATTRRLTVHFNPPSSCVLEISVRGVKI 616
>sp|Q9R237|JIP1_RAT C-Jun-amino-terminal kinase-interacting protein 1 OS=Rattus
norvegicus GN=Mapk8ip1 PE=1 SV=2
Length = 708
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 2 GVNLRTGRQGIFPSAYAVDV--EYEDLQTTTPKPKR-ERFLLGYLGSVETSAHKGNAVIC 58
N+RTG +G+FP+ YA++V E E + ++F + +LGSV+ HKGN V+C
Sbjct: 525 AYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWIDQFRVKFLGSVQVPYHKGNDVLC 584
Query: 59 QAVHKIRQTQ------HRPHSCILEVSDEGLRM 85
A+ KI T+ + P SC+LE+S G+++
Sbjct: 585 AAMQKIATTRRLTVHFNPPSSCVLEISVRGVKI 617
>sp|Q13387|JIP2_HUMAN C-Jun-amino-terminal kinase-interacting protein 2 OS=Homo sapiens
GN=MAPK8IP2 PE=1 SV=2
Length = 824
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 9/93 (9%)
Query: 2 GVNLRTGRQGIFPS--AYAVDVEYEDLQTTTPKP-KRERFLLGYLGSVETSAHKGNAVIC 58
G N+RTG +G+FP+ A+AV +DL + P ERF + +LGSVE H+GN ++C
Sbjct: 644 GFNMRTGERGVFPAFYAHAVPGPAKDLLGSKRSPCWVERFDVQFLGSVEVPCHQGNGILC 703
Query: 59 QAVHKI----RQTQH--RPHSCILEVSDEGLRM 85
A+ KI + T H P SC LE+S G+++
Sbjct: 704 AAMQKIATARKLTVHLRPPASCDLEISLRGVKL 736
>sp|P16554|NUMB_DROME Protein numb OS=Drosophila melanogaster GN=numb PE=1 SV=2
Length = 556
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 38 FLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVE 87
F + YLG VE +G V +A+ +RQ++ RP +L VS +GLR+V+
Sbjct: 83 FSVKYLGCVEVFESRGMQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVD 132
>sp|Q9XTY6|NUMB1_CAEEL Numb-related protein 1 OS=Caenorhabditis elegans GN=num-1 PE=1 SV=1
Length = 593
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 38 FLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVEK 88
F + YLGSVE +G V A+ ++ ++ +P +L VS +GLR+V++
Sbjct: 108 FNVKYLGSVEVYESRGMQVCEGALKSLKASRRKPVKAVLYVSGDGLRVVDQ 158
>sp|A1L1I3|NUMBL_RAT Numb-like protein OS=Rattus norvegicus GN=Numbl PE=1 SV=1
Length = 614
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 38 FLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVE 87
F + YLG VE +G V AV K++ + +L VS +GLR+V+
Sbjct: 80 FPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVD 129
>sp|O08919|NUMBL_MOUSE Numb-like protein OS=Mus musculus GN=Numbl PE=1 SV=3
Length = 604
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 38 FLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVE 87
F + YLG VE +G V AV K++ + +L VS +GLR+V+
Sbjct: 80 FPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVD 129
>sp|Q9Y6R0|NUMBL_HUMAN Numb-like protein OS=Homo sapiens GN=NUMBL PE=1 SV=1
Length = 609
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 38 FLLGYLGSVETSAHKGNAVICQAVHKIRQTQHRPHSCILEVSDEGLRMVE 87
F + YLG VE +G V AV K++ + +L VS +GLR+V+
Sbjct: 80 FPVRYLGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVD 129
>sp|Q498M5|SH3R2_RAT Putative E3 ubiquitin-protein ligase SH3RF2 OS=Rattus norvegicus
GN=Sh3rf2 PE=2 SV=1
Length = 735
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 2 GVNLRTGRQGIFPSAYAVDV 21
GV+L TGR GIFPS Y + V
Sbjct: 423 GVSLVTGRTGIFPSDYVIPV 442
>sp|Q8BZT2|SH3R2_MOUSE Putative E3 ubiquitin-protein ligase SH3RF2 OS=Mus musculus
GN=Sh3rf2 PE=1 SV=2
Length = 735
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 2 GVNLRTGRQGIFPSAYAVDV 21
G++L TGR GIFPS Y + V
Sbjct: 422 GLSLLTGRTGIFPSDYVIPV 441
>sp|Q9P296|C5ARL_HUMAN C5a anaphylatoxin chemotactic receptor C5L2 OS=Homo sapiens
GN=GPR77 PE=1 SV=1
Length = 337
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 6 RTGRQGIFPSAYAVDVEYEDLQTTTPKPKRERFLLGYLGSVETSAHKGNAVICQAVHKIR 65
R Q FP+ V+Y +T RFL G+LG + A +A++C A + R
Sbjct: 173 RRLHQEHFPARLQCVVDYGGSSSTENAVTAIRFLFGFLGPLVAVASCHSALLCWAARRCR 232
>sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 3
OS=Homo sapiens GN=ENPP3 PE=1 SV=2
Length = 875
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 11 GIFPSAYAV---DVEYEDLQTTT------PKPKRERFLLGYLGSVETSAHKGNAVICQAV 61
G FPS Y V +E+ +T PK +R RF Y ++S H G V + +
Sbjct: 280 GSFPSIYMPYNGSVPFEERISTLLKWLDLPKAERPRFYTMYFEEPDSSGHAGGPVSARVI 339
Query: 62 HKIRQTQH 69
++ H
Sbjct: 340 KALQVVDH 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,175,083
Number of Sequences: 539616
Number of extensions: 1353054
Number of successful extensions: 3239
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3210
Number of HSP's gapped (non-prelim): 24
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)