BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3698
(534 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DED5|CPEB1_CARAU Cytoplasmic polyadenylation element-binding protein 1 OS=Carassius
auratus GN=cpeb1 PE=2 SV=1
Length = 559
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 165/271 (60%), Gaps = 29/271 (10%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + I S K+F+GGVPWD E L+ F +GP+ VEWP + P P
Sbjct: 287 TWSGQLPPR-HYQNPIYSCKVFLGGVPWDITEAGLINTFKCYGPLSVEWPGKDGKHPRCP 345
Query: 67 --------------------KAISLDVISELVLILG------QWATEGNLCGRVEVVPWA 100
+A+ D +L+ G + ++ C +V+PW
Sbjct: 346 PKGNMPKGYVYLVFESDKSVRALLQDCTEDLLHPEGYSEYYFKMSSRRMRCKDAQVIPWV 405
Query: 101 ISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPI 160
ISDSNY S +L+P T+FVGALHG L A+AL ++MNDLFG VVYAGIDTDKHKYPI
Sbjct: 406 ISDSNYV-SCPSQRLDPRNTVFVGALHGMLNAEALASIMNDLFGGVVYAGIDTDKHKYPI 464
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGI 220
GSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED +C C GP+FCR+
Sbjct: 465 GSGRVTFNNQRSYLKAVSAAFVEIKTPKFTKKVQIDPYLEDAICQSCSREPGPFFCRDKT 524
Query: 221 CYRYFCRSCWLKVH-IGEYSQHDPIVRNVRK 250
C++Y+CRSCW + H + S H P++RN +K
Sbjct: 525 CFKYYCRSCWHRQHSMDILSNHRPLMRNQKK 555
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ A HR +A+ TW G LP R + + I S K+F+GGVPWD E L+ F
Sbjct: 267 SIEREAWLHRQAASINEATFTWSGQLPPR-HYQNPIYSCKVFLGGVPWDITEAGLINTFK 325
Query: 514 QFGPV 518
+GP+
Sbjct: 326 CYGPL 330
>sp|Q91572|CPE1A_XENLA Cytoplasmic polyadenylation element-binding protein 1-A OS=Xenopus
laevis GN=cpeb1-a PE=1 SV=2
Length = 568
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/270 (45%), Positives = 167/270 (61%), Gaps = 29/270 (10%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + + S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 296 TWSGQLPPR-NYKNPVYSCKVFLGGVPWDITETGLINTFRVFGALSVEWPGKDGKHPRCP 354
Query: 67 ------------------------KAISLDVISE--LVLILGQWATEGNLCGRVEVVPWA 100
+A S D++S+ L + ++ C V+V+PW
Sbjct: 355 PKGNMPKGYVYLVFESEKSVRALLQACSQDLLSQDGLSEHYFKMSSRRMRCKEVQVIPWV 414
Query: 101 ISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPI 160
++DSN+ + S +L+P KT+FVGALHG L A+AL ++MNDLFG VVYAGIDTDKHKYPI
Sbjct: 415 LADSNFV-RSPSQRLDPSKTVFVGALHGMLNAEALASIMNDLFGGVVYAGIDTDKHKYPI 473
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGI 220
GSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED+VC C GP+FCR+ +
Sbjct: 474 GSGRVTFNNQRSYLKAVSAAFVEIKTAKFTKKVQIDPYLEDSVCQVCNAQPGPFFCRDQV 533
Query: 221 CYRYFCRSCWLKVHIGE-YSQHDPIVRNVR 249
C++YFCRSCW H E H P++RN +
Sbjct: 534 CFKYFCRSCWHWQHSMEILRHHRPLMRNQK 563
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + + S K+F+GGVPWD E L+ F
Sbjct: 276 SIEREARLHRQAAAVNEATCTWSGQLPPR-NYKNPVYSCKVFLGGVPWDITETGLINTFR 334
Query: 514 QFGPV 518
FG +
Sbjct: 335 VFGAL 339
>sp|Q9YGX5|CPEB1_DANRE Cytoplasmic polyadenylation element-binding protein 1 OS=Danio
rerio GN=cpeb1 PE=1 SV=1
Length = 559
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 165/271 (60%), Gaps = 29/271 (10%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + + S K+F+GGVPWD E L+ F +GP+ VEWP + P P
Sbjct: 287 TWSGQLPPR-HYQNPVYSCKVFLGGVPWDITEAGLINTFKCYGPLSVEWPGKDGKHPRCP 345
Query: 67 --------------------KAISLDVISELVLILG------QWATEGNLCGRVEVVPWA 100
+A+ D +L+ G + ++ C +V+PW
Sbjct: 346 PKGNMPKGYVYLVFESDKSVRALLQDCTEDLLHPEGYSEYYFKMSSRRMRCKDAQVIPWV 405
Query: 101 ISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPI 160
ISDSNY S +L+P T+FVGALHG L A+AL ++MNDLFG VVYAGIDTDKHKYPI
Sbjct: 406 ISDSNYV-SCPSQRLDPRNTVFVGALHGMLNAEALASIMNDLFGGVVYAGIDTDKHKYPI 464
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGI 220
GSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED +C C GP+FCR+
Sbjct: 465 GSGRVTFNNQRSYLKAVSAAFVEIKTPKFTKKVQIDPYLEDAICQSCSREPGPFFCRDKT 524
Query: 221 CYRYFCRSCWLKVH-IGEYSQHDPIVRNVRK 250
C++Y+CRSCW + H + S H P++RN +K
Sbjct: 525 CFKYYCRSCWHRQHSMDILSNHRPLMRNQKK 555
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ A HR +A+ TW G LP R + + + S K+F+GGVPWD E L+ F
Sbjct: 267 SIEREAWLHRQAASINEATFTWSGQLPPR-HYQNPVYSCKVFLGGVPWDITEAGLINTFK 325
Query: 514 QFGPV 518
+GP+
Sbjct: 326 CYGPL 330
>sp|Q52KN7|CPE1B_XENLA Cytoplasmic polyadenylation element-binding protein 1-B OS=Xenopus
laevis GN=cpeb1-b PE=2 SV=1
Length = 568
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 167/270 (61%), Gaps = 29/270 (10%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + + S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 296 TWSGQLPPR-NYKNPVYSCKVFLGGVPWDITETGLINTFRVFGALSVEWPGKDGKHPRCP 354
Query: 67 ------------------------KAISLDVISE--LVLILGQWATEGNLCGRVEVVPWA 100
+A + D++S+ L + ++ C V+V+PW
Sbjct: 355 PKGNMPKGYVYLVFESEKSVRALLQACTQDLLSQDGLSEHYFKMSSRRMRCKEVQVIPWV 414
Query: 101 ISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPI 160
++DSN+ + S +L+P KT+FVGALHG L A+AL ++MNDLFG VVYAGIDTDKHKYPI
Sbjct: 415 LADSNFV-RSPSQRLDPSKTVFVGALHGMLNAEALASIMNDLFGGVVYAGIDTDKHKYPI 473
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGI 220
GSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED+VC C GP+FCR+ +
Sbjct: 474 GSGRVTFNNQRSYLKAVSAAFVEIKTAKFTKKVQIDPYLEDSVCQVCNAQPGPFFCRDQV 533
Query: 221 CYRYFCRSCWLKVHIGE-YSQHDPIVRNVR 249
C++YFCRSCW H E H P++RN +
Sbjct: 534 CFKYFCRSCWHWQHSMEILRHHRPLMRNQK 563
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + + S K+F+GGVPWD E L+ F
Sbjct: 276 SIEREARLHRQAAAVNEATCTWSGQLPPR-NYKNPVYSCKVFLGGVPWDITETGLINTFR 334
Query: 514 QFGPV 518
FG +
Sbjct: 335 VFGAL 339
>sp|Q5R733|CPEB1_PONAB Cytoplasmic polyadenylation element-binding protein 1 OS=Pongo
abelii GN=CPEB1 PE=2 SV=1
Length = 486
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 164/265 (61%), Gaps = 24/265 (9%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + I S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 219 TWSGQLPPR-NYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP 277
Query: 67 KAISLDVISEL---VLILGQWATEGNL------------------CGRVEVVPWAISDSN 105
+ ++ EL V L Q + L C V+V+PW ++DSN
Sbjct: 278 PKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSN 337
Query: 106 YSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPIGSGRI 165
+ + S +L P +T+FVGALHG L A+AL ++NDLFG VVYAGIDTDKHKYPIGSGR+
Sbjct: 338 FV-RSPSQRLNPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRV 396
Query: 166 TFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGICYRYF 225
TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED++C C + GP+FCR+ +C++YF
Sbjct: 397 TFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYF 456
Query: 226 CRSCWLKVHIGE-YSQHDPIVRNVR 249
CRSCW H E H P++RN +
Sbjct: 457 CRSCWHWRHSMEGLRHHSPLMRNQK 481
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + I S K+F+GGVPWD E L+ F
Sbjct: 199 SIEREARLHRQAAAVNEATCTWSGQLPPR-NYKNPIYSCKVFLGGVPWDITEAGLVNTFR 257
Query: 514 QFG 516
FG
Sbjct: 258 VFG 260
>sp|Q9BZB8|CPEB1_HUMAN Cytoplasmic polyadenylation element-binding protein 1 OS=Homo
sapiens GN=CPEB1 PE=1 SV=1
Length = 566
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/270 (44%), Positives = 165/270 (61%), Gaps = 29/270 (10%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + I S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 294 TWSGQLPPR-NYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP 352
Query: 67 ------------------------KAISLDVISE--LVLILGQWATEGNLCGRVEVVPWA 100
+A S D +S L + ++ C V+V+PW
Sbjct: 353 PKGNMPKGYVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWV 412
Query: 101 ISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKYPI 160
++DSN+ + S +L+P +T+FVGALHG L A+AL ++NDLFG VVYAGIDTDKHKYPI
Sbjct: 413 LADSNFV-RSPSQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPI 471
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCREGI 220
GSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED++C C + GP+FCR+ +
Sbjct: 472 GSGRVTFNNQRSYLKAVSAAFVEIKTTKFTKKVQIDPYLEDSLCHICSSQPGPFFCRDQV 531
Query: 221 CYRYFCRSCWLKVHIGE-YSQHDPIVRNVR 249
C++YFCRSCW H E H P++RN +
Sbjct: 532 CFKYFCRSCWHWRHSMEGLRHHSPLMRNQK 561
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + I S K+F+GGVPWD E L+ F
Sbjct: 274 SIEREARLHRQAAAVNEATCTWSGQLPPR-NYKNPIYSCKVFLGGVPWDITEAGLVNTFR 332
Query: 514 QFG 516
FG
Sbjct: 333 VFG 335
>sp|P0C279|CPEB1_RAT Cytoplasmic polyadenylation element-binding protein 1 OS=Rattus
norvegicus GN=Cpeb1 PE=1 SV=1
Length = 561
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 33/272 (12%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + I S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 293 TWSGQLPPRN-YKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP 351
Query: 67 ------------------------KAISLDVISE--LVLILGQWATEGNLCGRVEVVPWA 100
+A S D +S L + ++ C V+V+PW
Sbjct: 352 PKGNMPKGYVYLVFELEKSVRALLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWV 411
Query: 101 ISDSNY--SPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKY 158
++DSN+ SP S +L+P +T+FVGALHG L A+AL ++NDLFG VVYAGIDTDKHKY
Sbjct: 412 LADSNFVWSP---SQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY 468
Query: 159 PIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCRE 218
PIGSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED++C C + GP+FCR+
Sbjct: 469 PIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSLCLICSSQPGPFFCRD 528
Query: 219 GICYRYFCRSCWLKVHIGE-YSQHDPIVRNVR 249
+C++YFCRSCW H E H P++RN +
Sbjct: 529 QVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQK 560
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + I S K+F+GGVPWD E L+ F
Sbjct: 273 SIEREARLHRQAAAVNEATCTWSGQLPPRN-YKNPIYSCKVFLGGVPWDITEAGLVNTFR 331
Query: 514 QFG 516
FG
Sbjct: 332 VFG 334
>sp|P70166|CPEB1_MOUSE Cytoplasmic polyadenylation element-binding protein 1 OS=Mus
musculus GN=Cpeb1 PE=1 SV=1
Length = 561
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/272 (44%), Positives = 166/272 (61%), Gaps = 33/272 (12%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAP 66
TW G LP R + + I S K+F+GGVPWD E L+ F FG + VEWP + P P
Sbjct: 293 TWSGQLPPRN-YKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCP 351
Query: 67 ------------------------KAISLDVISE--LVLILGQWATEGNLCGRVEVVPWA 100
+A S D +S L + ++ C V+V+PW
Sbjct: 352 PKGNMPKGYVYLVFELEKSVRALLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWV 411
Query: 101 ISDSNY--SPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKHKY 158
++DSN+ SP S +L+P +T+FVGALHG L A+AL ++NDLFG VVYAGIDTDKHKY
Sbjct: 412 LADSNFVWSP---SQRLDPSRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKY 468
Query: 159 PIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCSECQTHSGPYFCRE 218
PIGSGR+TF + R+Y A+ AAF+E+K+ + KK+QIDPYLED++C C + GP+FCR+
Sbjct: 469 PIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSLCLICSSQPGPFFCRD 528
Query: 219 GICYRYFCRSCWLKVHIGE-YSQHDPIVRNVR 249
+C++YFCRSCW H E H P++RN +
Sbjct: 529 QVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQK 560
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 454 TLDIAARHHRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFS 513
+++ AR HR +A TW G LP R + + I S K+F+GGVPWD E L+ F
Sbjct: 273 SIEREARLHRQAAAVNEATCTWSGQLPPRN-YKNPIYSCKVFLGGVPWDITEAGLVNTFR 331
Query: 514 QFG 516
FG
Sbjct: 332 VFG 334
>sp|Q6E3D5|CPB3_CAEBR Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis briggsae GN=cpb-3 PE=2 SV=1
Length = 753
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 175/354 (49%), Gaps = 58/354 (16%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-----QGTPE 61
+W G LP R ++ S KIF+GGVPWD E L F +FG VEWP + +
Sbjct: 279 SWHGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFGSCAVEWPGQEARYRSGQ 337
Query: 62 SPTAP--------------------------KAIS--LDVISELVLILGQW-------AT 86
S AP +A++ L S+ + G+W +
Sbjct: 338 SNIAPLTNLRNQSKYAGQAATGYVYMIFEDERAVASLLHECSQEIGGAGEWYFKIRAQRS 397
Query: 87 EGNLCGRVEVVPWAISDSNYSPQGH--STKLEPGKTIFVGALHGRLTAQALYNVMNDLFG 144
+ +V+++PW SDS + T +EP +T+FVGALHG +TAQ L+ +M D FG
Sbjct: 398 KSTEIRQVQIIPWVTSDSMFCEDESLLETGIEPKRTVFVGALHGMMTAQVLHWIMEDCFG 457
Query: 145 DVVYAGIDTDKHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVC 204
V +DTDK KYPIGSGR+TF AY AI ++ V + + K++QIDP+LE C
Sbjct: 458 SVECVQLDTDKFKYPIGSGRVTFREHGAYFKAIEMGYLHVHTSKFRKRVQIDPFLESTSC 517
Query: 205 SECQTHSGPYFCREGICYRYFCRSCWLKVHIGEYSQ--HDPIVRNVRKSPPSSPSGPHSG 262
C T S FCR C++Y+C +CW H + + H P++ V S + +GPH
Sbjct: 518 MVCTTESAQCFCRNRNCFKYYCHTCWAIDHGKDNADDVHVPVI--VPSSASKAYAGPHRR 575
Query: 263 -GLTLNTLNGFSSREDITTSSATSSPWFDSPLLTPMTPQIVRSPFESNSYAIHG 315
LT N+L S +T++ S +L+P P IV P ++ S A++G
Sbjct: 576 PHLTSNSL---SKSHGCSTNNQLSH------VLSPGFPMIVGGPSQTLS-ALYG 619
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 19/78 (24%)
Query: 457 IAARHHRSSANSQIPQK------------------TWEGVLPLRTQFSDEILSNKIFIGG 498
+ R+H +S N + P K +W G LP R ++ S KIF+GG
Sbjct: 244 VPTRNHFTSMNEESPSKKRTFSRQGLSNRDNLSNGSWHGELPPR-DYTSPTFSRKIFVGG 302
Query: 499 VPWDTPEYLLLTVFSQFG 516
VPWD E L F +FG
Sbjct: 303 VPWDITEAALKDSFGEFG 320
>sp|O01835|CPB3_CAEEL Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis elegans GN=cpb-3 PE=2 SV=2
Length = 745
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 148/304 (48%), Gaps = 52/304 (17%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-----QGTPE 61
TW G LP R ++ S KIF+GGVPWD E L F +FG VEWP + +
Sbjct: 278 TWFGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFGSCAVEWPGQEARYRSGQ 336
Query: 62 SPTAPKAISLDVISE---------LVLIL--------------------GQW-------A 85
S AP SL ++ + +I G+W
Sbjct: 337 SNLAPSNGSLRAQTKYTGQAATGYVYMIFEDERAVASLLHECSQEIGGAGEWYFKIRAQR 396
Query: 86 TEGNLCGRVEVVPWAISDSNYSPQGH--STKLEPGKTIFVGALHGRLTAQALYNVMNDLF 143
++ +V+++PW SDS + T +EP +T+FVGALHG +TAQ L+++M D F
Sbjct: 397 SKSTEIRQVQIIPWVTSDSMFCEDDTLLETGIEPKRTVFVGALHGMMTAQVLHSIMEDCF 456
Query: 144 GDVVYAGIDTDKHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNV 203
G V +DTDK KYPIGSGR+TF AY AI ++ V + + K++QIDP+LE
Sbjct: 457 GAVECVQLDTDKFKYPIGSGRVTFREHGAYFKAIEMGYLHVYTSKFRKRVQIDPFLESTC 516
Query: 204 CSECQTHSGPYFCREGICYRYFCRSCWLKVHIGEYSQ--HDPIVRNVRKSPPSSPSGPHS 261
C C + S FCR C++Y+C +CW H + Q H P++ PSS S
Sbjct: 517 CMVCNSQSAHCFCRNKNCFKYYCHNCWALDHGKDDDQEVHIPVIV------PSSASKAFP 570
Query: 262 GGLT 265
G T
Sbjct: 571 GATT 574
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 18/75 (24%)
Query: 459 ARHHRSSANSQIPQK-----------------TWEGVLPLRTQFSDEILSNKIFIGGVPW 501
+R H +SAN + P K TW G LP R ++ S KIF+GGVPW
Sbjct: 246 SREHFTSANEESPMKRKNFQQEHGNKNRDSDATWFGELPPR-DYTSPTFSRKIFVGGVPW 304
Query: 502 DTPEYLLLTVFSQFG 516
D E L F +FG
Sbjct: 305 DITEAALKDSFGEFG 319
>sp|Q6E3D4|CPB3_CAERE Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis remanei GN=cpb-3 PE=2 SV=1
Length = 766
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 173/354 (48%), Gaps = 57/354 (16%)
Query: 7 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-----QGTPE 61
TW G LP R ++ S KIF+GGVPWD E L F +FG VEWP +
Sbjct: 291 TWHGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFGSCAVEWPGHEARYRNAQ 349
Query: 62 SPTA-------------------------PKAIS--LDVISELVLILGQW-------ATE 87
S TA +A++ L S+ + G+W ++
Sbjct: 350 SNTASLNLRNQSKYTGQAATGYVYMIFEDERAVASLLHECSQEIGGAGEWYFKIRAQRSK 409
Query: 88 GNLCGRVEVVPWAISDSNYSPQGH--STKLEPGKTIFVGALHGRLTAQALYNVMNDLFGD 145
+V+++PW SDS + +EP +T+FVGALHG +TAQ L+++M D FG
Sbjct: 410 STEIRQVQIIPWVTSDSMFCEDESLLEVGIEPKRTVFVGALHGMMTAQVLHSIMEDCFGS 469
Query: 146 VVYAGIDTDKHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNVCS 205
V +DTDK KYPIGSGR+TF AY AI ++ V + + K++QIDP+LE C
Sbjct: 470 VECVQLDTDKFKYPIGSGRVTFREHGAYFKAIEMGYLHVHTSKFRKRVQIDPFLESTNCM 529
Query: 206 ECQTHSGPYFCREGICYRYFCRSCWL----KVHIGEYSQHDPIVRNVRKSPPSSPSGPHS 261
C T FCR C++Y+C +CW H GE H P++ PSS S S
Sbjct: 530 VCTTELAHCFCRNRNCFKYYCHTCWAVDHGHGHDGEV--HVPVIV------PSSASKAFS 581
Query: 262 GGLTLNTLNGFSSREDITTSSATSSPWFDSPLLTPMTPQIVRSPFESNSYAIHG 315
G + L+ S + + S+++S + +++P P +V +P + N A++G
Sbjct: 582 GPNRRSHLSSNSPSKPASLMSSSNSQV--AHMVSPAYPVLVGAPAQ-NLSALYG 632
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 474 TWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFG 516
TW G LP R ++ S KIF+GGVPWD E L F +FG
Sbjct: 291 TWHGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 332
>sp|Q6E3D2|CPB3_CAEJA Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis japonica GN=cpb-3 PE=2 SV=1
Length = 734
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 134/273 (49%), Gaps = 44/273 (16%)
Query: 1 SQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP---- 56
SQ +W G LP R ++ S KIF+GGVPWD E L F +FG VEWP
Sbjct: 269 SQQSSASWHGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFGSCAVEWPGQEA 327
Query: 57 -----QGTPESPTA-----------------------PKAIS--LDVISELVLILGQW-- 84
Q P A +A++ L S+ + G+W
Sbjct: 328 RYRSGQSNVMPPNANLRAHSKYSGQATTGYVYMIFEDERAVAALLHECSQEIGGAGEWYF 387
Query: 85 -----ATEGNLCGRVEVVPWAISDSNYSPQGH--STKLEPGKTIFVGALHGRLTAQALYN 137
++ +V+++PW SDS Y + +EP +T+FVGALHG +TAQ L++
Sbjct: 388 KIRAQRSKSTEIRQVQIIPWVTSDSLYCHEESILEVGIEPKRTVFVGALHGMMTAQVLHS 447
Query: 138 VMNDLFGDVVYAGIDTDKHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDP 197
+M D FG V +DTDK KYPIGSGR+TF AY AI ++ V + + K++QIDP
Sbjct: 448 IMEDCFGCVECVQLDTDKFKYPIGSGRVTFREHGAYFKAIEIGYLHVHTSKFRKRVQIDP 507
Query: 198 YLEDNVCSECQTHSGPYFCREGICYRYFCRSCW 230
+LE C C FCR C++Y+C SCW
Sbjct: 508 FLESTSCMVCNLEPAHCFCRNRNCFKYYCHSCW 540
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 462 HRSSANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFG 516
R S NSQ +W G LP R ++ S KIF+GGVPWD E L F +FG
Sbjct: 263 QRQSVNSQQSSASWHGELPPR-DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 316
>sp|Q17RY0|CPEB4_HUMAN Cytoplasmic polyadenylation element-binding protein 4 OS=Homo
sapiens GN=CPEB4 PE=1 SV=1
Length = 729
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 134/249 (53%), Gaps = 24/249 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISL----DVIS 75
E S K+F+GG+P D E + F +FGP+ V+WP + +S PK + D S
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 76 ELVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW +SDS++ G S L+P KTIFVG
Sbjct: 528 VQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPLDPRKTIFVGG 586
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y AI A F+++
Sbjct: 587 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 646
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQTHS-----GPYFCREGICYRYFCRSCWLKVHIGEY 238
+ G I K++++ PY L+D +C ECQ P+FC C +Y+C CW +H
Sbjct: 647 QHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAG 706
Query: 239 SQ-HDPIVR 246
+ H P+V+
Sbjct: 707 REFHKPLVK 715
>sp|Q7TN98|CPEB4_MOUSE Cytoplasmic polyadenylation element-binding protein 4 OS=Mus
musculus GN=Cpeb4 PE=2 SV=1
Length = 729
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 134/249 (53%), Gaps = 24/249 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISL----DVIS 75
E S K+F+GG+P D E + F +FGP+ V+WP + +S PK + D S
Sbjct: 468 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESS 527
Query: 76 ELVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW +SDS++ G S L+P KTIFVG
Sbjct: 528 VQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPLDPRKTIFVGG 586
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y AI A F+++
Sbjct: 587 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 646
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQTHS-----GPYFCREGICYRYFCRSCWLKVHIGEY 238
+ G I K++++ PY L+D +C ECQ P+FC C +Y+C CW +H
Sbjct: 647 QHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAG 706
Query: 239 SQ-HDPIVR 246
+ H P+V+
Sbjct: 707 REFHKPLVK 715
>sp|Q7Z5Q1|CPEB2_HUMAN Cytoplasmic polyadenylation element-binding protein 2 OS=Homo
sapiens GN=CPEB2 PE=2 SV=3
Length = 589
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 135/255 (52%), Gaps = 24/255 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISLDVISE--- 76
E S K+F+GG+P D E + F +FGP+ V+WP + +S PK + + E
Sbjct: 328 ERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS 387
Query: 77 -LVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW +SDS++ G S L+P KTIFVG
Sbjct: 388 VQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPLDPRKTIFVGG 446
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y AI A F+++
Sbjct: 447 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 506
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQTHS-----GPYFCREGICYRYFCRSCWLKVHIGEY 238
+ G I K++++ PY L+D +C ECQ P+FC C +Y+C CW +H
Sbjct: 507 QHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAG 566
Query: 239 SQ-HDPIVRNVRKSP 252
+ H P+V+ P
Sbjct: 567 REFHKPLVKEGADRP 581
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 488 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
E S K+F+GG+P D E + F +FGP+ ++AE S
Sbjct: 328 ERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 370
>sp|Q7TN99|CPEB3_MOUSE Cytoplasmic polyadenylation element-binding protein 3 OS=Mus
musculus GN=Cpeb3 PE=1 SV=1
Length = 716
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 26/259 (10%)
Query: 13 PLRTQFSDEI--LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAI 69
P R Q + + S K+F+GG+P D E + F +FGP+ V+WP + +S PK
Sbjct: 445 PTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGY 504
Query: 70 SLDVISE----LVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKL 115
+ + E LI +G L C V++ PW +SDS++ G S L
Sbjct: 505 AFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPL 563
Query: 116 EPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYS 174
+P KTIFVG + L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y
Sbjct: 564 DPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYI 623
Query: 175 DAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ-THSG----PYFCREGICYRYFCRS 228
AI A F++++ I K++++ PY L+D +C ECQ T G P+FC C +Y+C
Sbjct: 624 AAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEY 683
Query: 229 CWLKVHIGEYSQ-HDPIVR 246
CW +H + H P+V+
Sbjct: 684 CWASIHSRAGREFHKPLVK 702
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 480 PLRTQFSDEI--LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
P R Q + + S K+F+GG+P D E + F +FGP+ ++AE S
Sbjct: 445 PTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 497
>sp|Q8NE35|CPEB3_HUMAN Cytoplasmic polyadenylation element-binding protein 3 OS=Homo
sapiens GN=CPEB3 PE=1 SV=2
Length = 698
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 26/259 (10%)
Query: 13 PLRTQFSDEI--LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAI 69
P R Q + + S K+F+GG+P D E + F +FGP+ V+WP + +S PK
Sbjct: 427 PTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGY 486
Query: 70 SLDVISE----LVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKL 115
+ + E LI +G L C V++ PW +SDS++ G S L
Sbjct: 487 AFLLFQEESSVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPL 545
Query: 116 EPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYS 174
+P KTIFVG + L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y
Sbjct: 546 DPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYI 605
Query: 175 DAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ-THSG----PYFCREGICYRYFCRS 228
AI A F++++ I K++++ PY L+D +C ECQ T G P+FC C +Y+C
Sbjct: 606 AAISARFVQLQHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEY 665
Query: 229 CWLKVHIGEYSQ-HDPIVR 246
CW +H + H P+V+
Sbjct: 666 CWASIHSRAGREFHKPLVK 684
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 480 PLRTQFSDEI--LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
P R Q + + S K+F+GG+P D E + F +FGP+ ++AE S
Sbjct: 427 PTRCQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 479
>sp|Q28CH2|CPEB3_XENTR Cytoplasmic polyadenylation element-binding protein 3 OS=Xenopus
tropicalis GN=cpeb3 PE=2 SV=1
Length = 632
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 135/249 (54%), Gaps = 24/249 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISLDVISE--- 76
E S K+F+GG+P D E + F +FGP+ V+WP + +S PK + + E
Sbjct: 371 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS 430
Query: 77 -LVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW +SDS++ G S L+P KTIFVG
Sbjct: 431 VQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPLDPRKTIFVGG 489
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y AI A F+++
Sbjct: 490 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 549
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQ-THSG----PYFCREGICYRYFCRSCWLKVHIGEY 238
+ I K++++ PY L+D +C ECQ T G P+FC C +Y+C CW +H
Sbjct: 550 QHNDIDKRVEVKPYVLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAG 609
Query: 239 SQ-HDPIVR 246
+ H P+V+
Sbjct: 610 REFHKPLVK 618
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 488 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
E S K+F+GG+P D E + F +FGP+ ++AE S
Sbjct: 371 ERYSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 413
>sp|Q812E0|CPEB2_MOUSE Cytoplasmic polyadenylation element-binding protein 2 OS=Mus
musculus GN=Cpeb2 PE=1 SV=1
Length = 521
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 135/249 (54%), Gaps = 24/249 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISLDVISE--- 76
E S K+F+GG+P D E + F +FGP+ V+WP + +S PK + + E
Sbjct: 260 ERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESS 319
Query: 77 -LVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW +SDS++ G S L+P KTIFVG
Sbjct: 320 VQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDG-SQPLDPRKTIFVGG 378
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD + KYP G+GR+ F + ++Y AI A F+++
Sbjct: 379 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 438
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQTHS-----GPYFCREGICYRYFCRSCWLKVHIGEY 238
+ G I K++++ PY L+D +C ECQ P+FC C +Y+C CW +H
Sbjct: 439 QHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAG 498
Query: 239 SQ-HDPIVR 246
+ H P+V+
Sbjct: 499 REFHKPLVK 507
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 488 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
E S K+F+GG+P D E + F +FGP+ ++AE S
Sbjct: 260 ERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKS 302
>sp|Q7SXN4|CPEB4_DANRE Cytoplasmic polyadenylation element-binding protein 4 OS=Danio
rerio GN=cpeb4 PE=2 SV=1
Length = 635
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 135/249 (54%), Gaps = 24/249 (9%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISL----DVIS 75
E S K+F+GG+P D E + F +FG + V+WP + +S PK + D S
Sbjct: 374 ERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESS 433
Query: 76 ELVLILGQWATEGNL--C--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGA 125
LI +G L C V++ PW ++DS++ G S L+P KTIFVG
Sbjct: 434 VQALIDACMEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDG-SQPLDPRKTIFVGG 492
Query: 126 LHGRLTAQALYNVMNDLFGDVVYAGIDTDKH-KYPIGSGRITFGSTRAYSDAIRAAFIEV 184
+ L A L +M+ L+G V YAGIDTD KYP G+GR+ F + ++Y AI A F+++
Sbjct: 493 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL 552
Query: 185 KSGRICKKLQIDPY-LEDNVCSECQ-THSG----PYFCREGICYRYFCRSCWLKVHIGEY 238
+ G I K++++ PY L+D +C ECQ T G P+FC C +Y+C CW +H
Sbjct: 553 QHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAG 612
Query: 239 SQ-HDPIVR 246
+ H P+V+
Sbjct: 613 REFHKPLVK 621
>sp|Q9VSR3|ORB2_DROME Probable RNA-binding protein orb2 OS=Drosophila melanogaster
GN=orb2 PE=1 SV=1
Length = 704
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 140/259 (54%), Gaps = 28/259 (10%)
Query: 23 LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP-QGTPESPTAPKAISLDVI---SELV 78
S K+F+GG+P D E + T F +FGP+ V+WP + +S PK + + S +
Sbjct: 445 FSRKVFVGGLPPDIDEDEITTSFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 504
Query: 79 LILGQWATEGN---LC--------GRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGALH 127
++ T+ + LC V++ PW ++D++Y + L+P KT+FVG +
Sbjct: 505 QLIDSCITDEDKLYLCVSSPTIKDKAVQIRPWRLADADYVLDA-TMSLDPRKTVFVGGVP 563
Query: 128 GRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEVKS 186
L A L +M+ L+G V YAGIDTD + KYP G+GR+ F + ++Y AI A F++++
Sbjct: 564 RPLKAFELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQH 623
Query: 187 GRICKKLQIDPY-LEDNVCSECQTHS-----GPYFCREGICYRYFCRSCWLKVHI---GE 237
G I K++++ PY L+D +C EC+ P+FC C +Y+C CW +H E
Sbjct: 624 GDIDKRVEVKPYVLDDQMCDECEGQRCGGKFAPFFCANVTCLQYYCEHCWAVIHSRPGRE 683
Query: 238 YSQHDPIVRNVRKSPPSSP 256
Y H P+V+ P + P
Sbjct: 684 Y--HKPLVKEGADRPRAVP 700
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 490 LSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
S K+F+GG+P D E + T F +FGP+ ++AE S
Sbjct: 445 FSRKVFVGGLPPDIDEDEITTSFRRFGPLVVDWPHKAESKS 485
>sp|Q03571|CPB1_CAEEL Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis elegans GN=cpb-1 PE=1 SV=3
Length = 560
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 41/268 (15%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQG------TPESPTAPKAISLD 72
++ + S K+FIGG+P D E + F FG V ++WP+ E + S
Sbjct: 240 AEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRA 299
Query: 73 VISELVLILGQWATEGNLCGR---------------------VEVVPWAISDSNYSPQGH 111
V + L+ + L V+V PW +SD +Y +
Sbjct: 300 VTGYVFLVFTHERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDN 359
Query: 112 STKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPIGSGRITFGST 170
S+ ++ +T+F+G + AQ L + +G V Y GID D + KYP G+ R+TF ++
Sbjct: 360 SS-VDHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTS 418
Query: 171 RAYSDAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ----THS-GPYFCREGICYRY 224
+A+ AI F++V K+++I PY +E+ C EC+ H+ PYFC C +Y
Sbjct: 419 QAFVRAISGRFVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQY 478
Query: 225 FCRSCWLKVHIGE------YSQHDPIVR 246
+C CW ++HIG+ QH P+VR
Sbjct: 479 YCEGCWDRMHIGKNEDNKLEDQHYPMVR 506
>sp|Q6E3D0|CPB1_CAEBR Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis briggsae GN=cpb-1 PE=2 SV=1
Length = 585
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 134/275 (48%), Gaps = 41/275 (14%)
Query: 12 LPLRTQFSDE-ILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAPKAI- 69
L + FS E + S K+FIGG+P D P+ + F FG V ++WP+ + A
Sbjct: 237 LTKKQPFSTEPLYSRKVFIGGLPIDVPDEEVYVTFGSFGKVLIDWPRRPEHNGRASDMYE 296
Query: 70 ------SLDVISELVLILG----------------------QWATEGNLCGRVEVVPWAI 101
+L +S V ++ Q ++ V+V PW +
Sbjct: 297 SEMGRRNLRSVSGYVFLVFTHEDSVQDLVNACEFYDGKYYLQLSSPTMQDKAVQVRPWRL 356
Query: 102 SDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPI 160
SD +Y + T ++P +T+F+G + A L + D +G V Y GID D + KYP
Sbjct: 357 SDIDYFSEEKVT-VDPRRTVFIGGVPRPTRACDLARSLQDYYGKVSYVGIDIDPELKYPK 415
Query: 161 GSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ----THS-GPY 214
G+ R+TF + +++ AI F++V K+++I PY +ED C EC+ H+ PY
Sbjct: 416 GAARVTFATAQSFVRAISGRFVQVTHAETNKRVEIKPYVMEDQYCDECEGDLCKHNYAPY 475
Query: 215 FCREGICYRYFCRSCWLKVH--IGE-YSQHDPIVR 246
+C + C +Y+C CW ++H +G+ + H P+VR
Sbjct: 476 YCGDSSCLQYYCEGCWDRMHYEMGQSRADHRPMVR 510
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 479 LPLRTQFSDE-ILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 518
L + FS E + S K+FIGG+P D P+ + F FG V
Sbjct: 237 LTKKQPFSTEPLYSRKVFIGGLPIDVPDEEVYVTFGSFGKV 277
>sp|Q6E3C9|CPB1_CAERE Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis remanei GN=cpb-1 PE=2 SV=1
Length = 594
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 42/269 (15%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQ---------GTPESPTAPKAI 69
++ + S K+FIGG+P D E + F FG V V+WP+ G
Sbjct: 251 AEALYSRKVFIGGLPIDVAEEEVWATFGAFGKVLVDWPRRPEHNNGRGGDNMYEVEMGRR 310
Query: 70 SLDVISELVLIL--GQWATEG--NLC------------------GRVEVVPWAISDSNYS 107
+L +S V ++ + + + N C V+V PW +SD +Y
Sbjct: 311 NLRSVSGYVFLVFTNERSVQELVNACEFYENKYYLQLSSPTMSDKAVQVRPWRLSDIDYF 370
Query: 108 PQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPIGSGRIT 166
S ++ +T+F+G + A L + + D +G V Y GID D + KYP G+ R+T
Sbjct: 371 CDD-SCSVDHRRTVFIGGVPRPTRASDLASSLQDYYGKVSYVGIDIDPELKYPKGAARVT 429
Query: 167 FGSTRAYSDAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ----THS-GPYFCREGI 220
F +++++ AI F++V K+++I PY +ED C ECQ H+ PYFC +
Sbjct: 430 FANSQSFVRAISGRFVQVTHAETNKRVEIKPYVMEDQHCDECQGVLCKHNYAPYFCGDSS 489
Query: 221 CYRYFCRSCWLKVH---IGEYSQHDPIVR 246
C +Y+C +CW ++H + H P+VR
Sbjct: 490 CLQYYCEACWDRMHYIVCDSRADHRPMVR 518
>sp|Q6E3C7|CPB1_CAEJA Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis japonica GN=cpb-1 PE=2 SV=1
Length = 617
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 41/271 (15%)
Query: 15 RTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPESPTAPKAISLDV- 73
R+ ++ + S K+FIGG+P D E + F FG V V+WP+ PE +D+
Sbjct: 263 RSISAEPLYSRKVFIGGLPIDVTEEEVWATFGWFGKVLVDWPR-RPEHGGRGDFYEMDMG 321
Query: 74 ------ISELVLILGQWATEG----NLC------------------GRVEVVPWAISDSN 105
+S V ++ Q N C V+V W +SD +
Sbjct: 322 RRNSRSVSGYVFLVFQDEKAVQELVNACELYENKYYLQLSSPTMADKAVQVRAWRLSDID 381
Query: 106 YSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGIDTD-KHKYPIGSGR 164
Y +++ ++ +T+F+G + A L + +G V Y GID D + KYP G+ R
Sbjct: 382 YFCDENAS-VDHRRTVFIGGVPRPTRASDLAYCLQQHYGKVSYVGIDIDPELKYPKGAAR 440
Query: 165 ITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPY-LEDNVCSECQ----THS-GPYFCRE 218
+TF + +++ AI F++V K+++I PY +ED C ECQ H+ PYFC +
Sbjct: 441 VTFATAQSFVRAISGRFVQVTHADTNKRVEIKPYVMEDQHCDECQGKLCKHNYAPYFCGD 500
Query: 219 GICYRYFCRSCWLKVHIG---EYSQHDPIVR 246
C +Y+C +CW ++H + H P+VR
Sbjct: 501 SSCLQYYCEACWDRMHYAMCDNRADHRPMVR 531
>sp|Q6E3F3|CPB2_CAEBR Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis briggsae GN=cpb-2 PE=2 SV=1
Length = 566
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 93 RVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGID 152
RV++ PW ++D+ + + + F+G + L A L + +G+VV GID
Sbjct: 405 RVQIRPWLLADAEFL-MDFNVPINTKMVAFIGGVPRPLKAVELAHFFEQTYGNVVCVGID 463
Query: 153 TD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNV-CSECQT- 209
D K KYP GSGR+ F + AY AI +I + I K+++I PY N C EC +
Sbjct: 464 IDNKFKYPRGSGRVAFSNYHAYVQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSSR 523
Query: 210 ---HSGPYFCREGICYRYFCRSCWLKVHIG-EYSQHDPIVRNV 248
P+FC C++Y+C CW K+H H P+V+ +
Sbjct: 524 YHRQYAPFFCPSLECFQYYCEPCWHKMHARPSRFHHMPVVKGI 566
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP 56
E+ S K+F+GG+P E +L FS++G ++V+WP
Sbjct: 234 EVYSRKVFVGGLPACVKEMDILHFFSRYGRLQVDWP 269
>sp|Q6E3F0|CPB2_CAEJA Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis japonica GN=cpb-2 PE=2 SV=1
Length = 594
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 93 RVEVVPWAISDSNYSPQGH---STKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYA 149
RV++ PW ++D+ + + +TKL F+G + L A L + +G+VV
Sbjct: 433 RVQIRPWLLADAEFLMDFNVPINTKL----VAFIGGVPRPLKAVELAHFFEQTYGNVVCV 488
Query: 150 GIDTD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNV-CSEC 207
GID D K KYP GSGR+ F + AY AI +I + I K+++I PY N C EC
Sbjct: 489 GIDIDNKFKYPRGSGRVAFSNYDAYVQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEEC 548
Query: 208 ----QTHSGPYFCREGICYRYFCRSCWLKVHIG-EYSQHDPIVRNV 248
P+FC C++Y+C CW K+H H P+V+ V
Sbjct: 549 SGRYHRQHAPFFCPSLECFQYYCEPCWHKMHAHPSRFHHMPVVKGV 594
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP 56
E+ S K+F+GG+P E +L FS++G ++V+WP
Sbjct: 253 EVYSRKVFVGGLPACVTEDDILGFFSRYGRLQVDWP 288
>sp|Q18317|CPB2_CAEEL Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis elegans GN=cpb-2 PE=2 SV=3
Length = 570
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
Query: 93 RVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYAGID 152
RV++ PW ++D+ + + + F+G + L A L + +G VV GID
Sbjct: 409 RVQIRPWLLADAEFL-MDFNVPINTKLVAFIGGVPRPLKAVELAHFFEQTYGHVVCVGID 467
Query: 153 TD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNV-CSEC--- 207
D K KYP GSGR+ F AY AI +I + I K+++I PY N C EC
Sbjct: 468 IDNKFKYPRGSGRVAFSDYDAYVQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSGR 527
Query: 208 -QTHSGPYFCREGICYRYFCRSCWLKVHIG-EYSQHDPIVRNV 248
PYFC C++Y+C CW K+H H P+V+ V
Sbjct: 528 YHRQHAPYFCPSLECFQYYCEPCWHKMHSHPSRFHHMPVVKGV 570
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 16/190 (8%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWPQGTPE--SPTAPKAISLDVISELV 78
E+ S K+F+GG+P E +L FS++G ++V+WP E S + P + + S
Sbjct: 232 EVYSRKVFVGGLPSCVKESDILNFFSRYGRLQVDWPSKHYECKSDSDPSLCNEPISSSSY 291
Query: 79 LILGQWATEGNLCGRVEVVPWAISDSNYSPQGHSTKLEPGKTIFVGALHGRLTAQALYNV 138
A G E+ P+ N Q S++ I G++ G L
Sbjct: 292 QPSSHLAMVSPPFG--EINPFM---RNMPAQSESSQTGGFGRISSGSIGGFLNPGMAQVA 346
Query: 139 MNDL-FGDVVYAG-IDTDKHKYPIGSGRITFGSTRAYSDAI-------RAAFIEVKSGRI 189
+L FG G I+ DK ++ +G + F R+ D + FI ++S
Sbjct: 347 RGNLGFGSTKSDGSINGDKRQHHLGYVFLLFEKERSVRDLVLDCFEEEEGLFITLESSTD 406
Query: 190 CKKLQIDPYL 199
++QI P+L
Sbjct: 407 SIRVQIRPWL 416
>sp|Q6E3F2|CPB2_CAERE Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis remanei GN=cpb-2 PE=2 SV=1
Length = 571
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 93 RVEVVPWAISDSNYSPQGH---STKLEPGKTIFVGALHGRLTAQALYNVMNDLFGDVVYA 149
RV++ PW ++D+ + + +TKL F+G + L A L + +G+VV
Sbjct: 410 RVQIRPWLLADAEFLMDFNVPINTKL----VAFIGGVPRPLKAVELAHFFEQTYGNVVCV 465
Query: 150 GIDTD-KHKYPIGSGRITFGSTRAYSDAIRAAFIEVKSGRICKKLQIDPYLEDNV-CSEC 207
GID D K KYP GSGR+ F + AY AI +I + I K+++I PY N C EC
Sbjct: 466 GIDIDNKFKYPRGSGRVAFSNYDAYVQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEEC 525
Query: 208 QT----HSGPYFCREGICYRYFCRSCWLKVHIG-EYSQHDPIVRNV 248
+ P+FC C++Y+C CW K+H H P+V+ +
Sbjct: 526 SSRYNRQYAPFFCPSLECFQYYCEPCWHKMHSHPSRFHHMPVVKGI 571
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 21 EILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKVEWP 56
E+ S K+F+GG+P E +L FS++G ++V+WP
Sbjct: 232 EVYSRKVFVGGLPGCVKESDILNFFSRYGRLQVDWP 267
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1
Length = 407
Score = 38.9 bits (89), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 457 IAARHHRSSANSQIPQK-TWEGVLPLRTQ---------FSDEILSNKIFIGGVPWDTPEY 506
+A+R H + P+ T G+ P RT+ SD SNKIF+GG+P + E
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 127
Query: 507 LLLTVFSQFGPVKAVVM 523
L F +FG V VVM
Sbjct: 128 ELREYFKKFGVVTEVVM 144
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 486 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
+DEI K+F+GG+ W T + L + FSQ+G V V+ + + ++
Sbjct: 6 ADEI--GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTN 48
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 51
SD SNKIF+GG+P + E L F +FG V
Sbjct: 107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVV 139
Score = 32.3 bits (72), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 51
+DEI K+F+GG+ W T + L + FSQ+G V
Sbjct: 6 ADEI--GKLFVGGLDWSTTQETLRSYFSQYGEV 36
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2
Length = 406
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 457 IAARHHRSSANSQIPQK-TWEGVLPLRTQ---------FSDEILSNKIFIGGVPWDTPEY 506
+A+R H + P+ T G+ P RT+ SD SNKIF+GG+P + E
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 127
Query: 507 LLLTVFSQFGPVKAVVM 523
L F +FG V VVM
Sbjct: 128 ELREYFKKFGVVTEVVM 144
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 486 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
+DEI K+F+GG+ W T + L + FSQ+G V V+ + + ++
Sbjct: 6 ADEI--GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTN 48
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 51
SD SNKIF+GG+P + E L F +FG V
Sbjct: 107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVV 139
Score = 32.3 bits (72), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 19 SDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 51
+DEI K+F+GG+ W T + L + FSQ+G V
Sbjct: 6 ADEI--GKLFVGGLDWSTTQETLRSYFSQYGEV 36
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1
Length = 360
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 471 PQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVM 523
P++ W+ P RT+ S SNKIF+GG+P + E L F++FG V VVM
Sbjct: 97 PREGWQQKEP-RTENS---RSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVM 145
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 481 LRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKAVVMNRAEMSS 530
+ Q DEI K+F+GG+ W T + L + FSQ+G V V+ + + ++
Sbjct: 1 MNNQGGDEI--GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTN 48
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 14 LRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 51
+ Q DEI K+F+GG+ W T + L + FSQ+G V
Sbjct: 1 MNNQGGDEI--GKLFVGGLDWSTTQETLRSYFSQYGEV 36
>sp|Q24207|BOULE_DROME Protein boule OS=Drosophila melanogaster GN=bol PE=2 SV=1
Length = 228
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 480 PLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVKA--VVMNRAEMS 529
PL ++ N+IF+GG+ DT E L VFS +G VK+ ++++RA +S
Sbjct: 21 PLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAGVS 72
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 13 PLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPVK 52
PL ++ N+IF+GG+ DT E L VFS +G VK
Sbjct: 21 PLAAPKYGTLIPNRIFVGGISGDTTEADLTRVFSAYGTVK 60
>sp|Q9PTX2|CIRBP_LITCT Cold-inducible RNA-binding protein OS=Lithobates catesbeiana
GN=cirbp PE=2 SV=1
Length = 164
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 493 KIFIGGVPWDTPEYLLLTVFSQFGPVKAVVM 523
K+F+GG+ +DT E L TVFS++G ++ VV+
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVV 37
>sp|Q14103|HNRPD_HUMAN Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens
GN=HNRNPD PE=1 SV=1
Length = 355
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 493 KIFIGGVPWDTPEYLLLTVFSQFGPV 518
K+FIGG+ WDT + L FS+FG V
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
>sp|Q60668|HNRPD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus
GN=Hnrnpd PE=1 SV=2
Length = 355
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 493 KIFIGGVPWDTPEYLLLTVFSQFGPV 518
K+FIGG+ WDT + L FS+FG V
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
>sp|Q9JJ54|HNRPD_RAT Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus
GN=Hnrnpd PE=1 SV=1
Length = 353
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 493 KIFIGGVPWDTPEYLLLTVFSQFGPV 518
K+FIGG+ WDT + L FS+FG V
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDV 121
>sp|A3KN83|SBNO1_HUMAN Protein strawberry notch homolog 1 OS=Homo sapiens GN=SBNO1 PE=1
SV=1
Length = 1393
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 295 TPMTPQIVRSPFESNSYAIHGSSHSPPFGSHSMESCSPPYLTDEG--DYSPYYQTGGSTD 352
TP + + P + ++ ++ +H PP GS + + +PP T+ + + QT ST
Sbjct: 72 TPALLNVRQQPPSTTTFVLNQINHLPPLGSTIVMTKTPPVTTNRQTITLTKFIQTTASTR 131
Query: 353 YFSYNNAPSHLNLNGSMTDSSNLDNIE--DLLASLSLNNTGQSNVRAN-----GTAGSVP 405
+AP+ N +MT + + D ++ DLL + SLN + AN TA +
Sbjct: 132 --PSVSAPTVRN---AMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVATAATDV 186
Query: 406 SPHTSPLNSPRSSGAR 421
S T S GAR
Sbjct: 187 SNGTVKKESSNKEGAR 202
>sp|Q9SVM8|RBG2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis
thaliana GN=RBG2 PE=1 SV=1
Length = 158
Score = 33.5 bits (75), Expect = 4.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 465 SANSQIPQKTWEGVLPLRTQFSDEILSNKIFIGGVPWDTPEYLLLTVFSQFGPV 518
S+N +P + G L L +S K+FIGG+ W T + L F+ FG V
Sbjct: 16 SSNGNVPVTSMLGSLRL--------MSTKLFIGGLSWGTDDASLRDAFAHFGDV 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,040,464
Number of Sequences: 539616
Number of extensions: 10639827
Number of successful extensions: 40449
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 34282
Number of HSP's gapped (non-prelim): 5018
length of query: 534
length of database: 191,569,459
effective HSP length: 122
effective length of query: 412
effective length of database: 125,736,307
effective search space: 51803358484
effective search space used: 51803358484
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)