Query psy3703
Match_columns 79
No_of_seqs 105 out of 137
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 23:25:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hym_B Cell division cycle pro 98.6 1.3E-07 4.5E-12 63.1 6.2 68 4-71 2-76 (330)
2 3vtx_A MAMA; tetratricopeptide 97.5 0.00027 9.3E-09 44.3 5.5 54 13-66 1-54 (184)
3 3ma5_A Tetratricopeptide repea 97.0 0.003 1E-07 37.1 6.2 53 14-66 4-56 (100)
4 3u4t_A TPR repeat-containing p 96.8 0.0029 9.9E-08 41.2 6.0 51 16-66 2-52 (272)
5 1elw_A TPR1-domain of HOP; HOP 96.6 0.0079 2.7E-07 33.7 6.2 53 14-66 35-87 (118)
6 3upv_A Heat shock protein STI1 96.6 0.0088 3E-07 35.3 6.2 53 14-66 35-87 (126)
7 3k9i_A BH0479 protein; putativ 96.6 0.0033 1.1E-07 37.4 4.3 53 14-66 24-76 (117)
8 4gco_A Protein STI-1; structur 96.5 0.0096 3.3E-07 36.5 6.2 53 14-66 44-96 (126)
9 2xcb_A PCRH, regulatory protei 96.4 0.014 4.7E-07 35.7 6.4 52 15-66 50-101 (142)
10 1na3_A Designed protein CTPR2; 96.4 0.016 5.4E-07 31.7 6.1 35 17-51 9-43 (91)
11 2kck_A TPR repeat; tetratricop 96.3 0.017 5.7E-07 32.1 5.9 53 14-66 37-92 (112)
12 3gyz_A Chaperone protein IPGC; 96.3 0.0064 2.2E-07 39.3 4.6 50 16-65 35-84 (151)
13 3q49_B STIP1 homology and U bo 96.2 0.018 6.3E-07 33.8 6.2 51 15-65 41-91 (137)
14 2kat_A Uncharacterized protein 96.2 0.019 6.5E-07 33.5 6.3 53 14-66 16-68 (115)
15 2l6j_A TPR repeat-containing p 96.2 0.019 6.4E-07 32.5 5.9 37 14-50 35-71 (111)
16 4gcn_A Protein STI-1; structur 96.2 0.0079 2.7E-07 36.8 4.6 52 14-65 39-90 (127)
17 3q49_B STIP1 homology and U bo 96.2 0.021 7.1E-07 33.6 6.3 53 14-66 6-58 (137)
18 3rkv_A Putative peptidylprolyl 96.2 0.011 3.8E-07 36.5 5.3 52 15-66 61-112 (162)
19 3sz7_A HSC70 cochaperone (SGT) 96.2 0.018 6.2E-07 35.6 6.2 51 15-65 43-93 (164)
20 2l6j_A TPR repeat-containing p 96.2 0.012 4.2E-07 33.2 5.0 52 15-66 2-53 (111)
21 3vtx_A MAMA; tetratricopeptide 96.1 0.017 5.9E-07 35.8 5.8 54 13-66 103-156 (184)
22 3gyz_A Chaperone protein IPGC; 96.0 0.022 7.5E-07 36.7 6.3 53 14-66 67-119 (151)
23 2xcb_A PCRH, regulatory protei 96.0 0.012 4E-07 36.0 4.6 52 15-66 16-67 (142)
24 2vgx_A Chaperone SYCD; alterna 96.0 0.026 9.1E-07 35.3 6.3 40 15-54 53-92 (148)
25 3upv_A Heat shock protein STI1 95.9 0.016 5.4E-07 34.2 4.8 51 16-66 3-53 (126)
26 2lni_A Stress-induced-phosphop 95.9 0.023 7.7E-07 32.7 5.4 53 14-66 47-99 (133)
27 3sz7_A HSC70 cochaperone (SGT) 95.9 0.021 7.3E-07 35.3 5.5 55 12-66 6-60 (164)
28 2kck_A TPR repeat; tetratricop 95.8 0.01 3.4E-07 33.1 3.6 53 14-66 3-55 (112)
29 3mkr_A Coatomer subunit epsilo 95.8 0.025 8.4E-07 39.3 6.2 55 14-68 197-251 (291)
30 1elw_A TPR1-domain of HOP; HOP 95.8 0.027 9.4E-07 31.4 5.4 52 15-66 2-53 (118)
31 4ga2_A E3 SUMO-protein ligase 95.7 0.041 1.4E-06 34.3 6.4 54 14-67 62-115 (150)
32 2vyi_A SGTA protein; chaperone 95.7 0.048 1.6E-06 30.8 6.2 53 14-66 43-95 (131)
33 2vyi_A SGTA protein; chaperone 95.6 0.051 1.8E-06 30.7 6.2 40 15-54 78-117 (131)
34 2vgx_A Chaperone SYCD; alterna 95.6 0.02 6.9E-07 35.9 4.6 52 15-66 19-70 (148)
35 1na0_A Designed protein CTPR3; 95.5 0.059 2E-06 30.1 6.1 51 15-65 41-91 (125)
36 2r5s_A Uncharacterized protein 95.4 0.11 3.7E-06 32.6 7.7 55 14-68 105-161 (176)
37 2pl2_A Hypothetical conserved 95.4 0.039 1.3E-06 36.1 5.8 40 15-54 3-42 (217)
38 1a17_A Serine/threonine protei 95.4 0.06 2E-06 32.1 6.2 39 15-53 45-83 (166)
39 4gco_A Protein STI-1; structur 95.4 0.027 9.1E-07 34.5 4.6 49 18-66 14-62 (126)
40 2lni_A Stress-induced-phosphop 95.4 0.056 1.9E-06 30.9 5.8 51 14-64 81-131 (133)
41 3bee_A Putative YFRE protein; 95.4 0.019 6.4E-07 34.7 3.9 44 13-56 2-48 (93)
42 3ieg_A DNAJ homolog subfamily 95.4 0.034 1.2E-06 36.8 5.4 51 15-65 35-85 (359)
43 2xev_A YBGF; tetratricopeptide 95.3 0.062 2.1E-06 31.1 5.9 34 18-51 40-73 (129)
44 2kc7_A BFR218_protein; tetratr 95.3 0.12 4E-06 29.0 6.9 41 14-54 31-72 (99)
45 1hxi_A PEX5, peroxisome target 95.3 0.048 1.6E-06 33.0 5.5 40 15-54 49-88 (121)
46 1na0_A Designed protein CTPR3; 95.3 0.083 2.9E-06 29.5 6.2 49 17-65 9-57 (125)
47 1na3_A Designed protein CTPR2; 95.3 0.042 1.5E-06 29.9 4.8 41 14-54 40-80 (91)
48 2pl2_A Hypothetical conserved 95.2 0.036 1.2E-06 36.3 5.1 52 15-66 149-200 (217)
49 2dba_A Smooth muscle cell asso 95.1 0.05 1.7E-06 31.8 5.1 36 15-50 26-61 (148)
50 3qky_A Outer membrane assembly 95.0 0.08 2.7E-06 34.9 6.4 39 14-52 12-50 (261)
51 1xnf_A Lipoprotein NLPI; TPR, 95.0 0.11 3.7E-06 33.4 6.8 51 15-65 75-125 (275)
52 2xpi_A Anaphase-promoting comp 95.0 0.088 3E-06 38.1 7.0 55 14-68 302-356 (597)
53 4i17_A Hypothetical protein; T 94.9 0.042 1.4E-06 35.3 4.7 50 15-64 74-123 (228)
54 3urz_A Uncharacterized protein 94.9 0.06 2.1E-06 35.0 5.5 42 14-55 85-126 (208)
55 1elr_A TPR2A-domain of HOP; HO 94.9 0.058 2E-06 30.6 4.8 37 15-51 36-72 (131)
56 2dba_A Smooth muscle cell asso 94.8 0.082 2.8E-06 30.9 5.5 50 17-66 65-114 (148)
57 2v5f_A Prolyl 4-hydroxylase su 94.8 0.03 1E-06 33.5 3.6 39 15-53 44-82 (104)
58 3as5_A MAMA; tetratricopeptide 94.8 0.11 3.8E-06 30.9 6.2 33 17-49 42-74 (186)
59 1elr_A TPR2A-domain of HOP; HO 94.7 0.059 2E-06 30.5 4.5 51 16-66 3-53 (131)
60 2fo7_A Synthetic consensus TPR 94.6 0.1 3.4E-06 29.3 5.3 36 16-51 68-103 (136)
61 2kc7_A BFR218_protein; tetratr 94.6 0.089 3E-06 29.5 5.1 46 21-66 4-50 (99)
62 3qou_A Protein YBBN; thioredox 94.6 0.076 2.6E-06 36.5 5.6 54 13-66 113-166 (287)
63 3as5_A MAMA; tetratricopeptide 94.5 0.15 5E-06 30.4 6.2 40 15-54 74-113 (186)
64 3qou_A Protein YBBN; thioredox 94.5 0.12 4E-06 35.5 6.5 55 14-68 216-272 (287)
65 3fp2_A TPR repeat-containing p 94.5 0.097 3.3E-06 37.1 6.2 53 14-66 56-108 (537)
66 2fbn_A 70 kDa peptidylprolyl i 94.3 0.1 3.5E-06 33.1 5.4 51 15-65 120-170 (198)
67 4i17_A Hypothetical protein; T 94.3 0.15 5.2E-06 32.6 6.3 34 15-48 5-38 (228)
68 2fbn_A 70 kDa peptidylprolyl i 94.3 0.14 4.7E-06 32.5 6.0 49 18-66 89-137 (198)
69 2xev_A YBGF; tetratricopeptide 94.2 0.11 3.7E-06 30.0 5.0 35 18-52 3-37 (129)
70 3ieg_A DNAJ homolog subfamily 94.2 0.15 5E-06 33.7 6.2 51 16-66 2-52 (359)
71 4ga2_A E3 SUMO-protein ligase 94.2 0.056 1.9E-06 33.7 3.9 51 16-66 30-80 (150)
72 3urz_A Uncharacterized protein 94.2 0.077 2.6E-06 34.5 4.7 44 23-66 60-103 (208)
73 2c2l_A CHIP, carboxy terminus 94.1 0.15 5.3E-06 34.9 6.3 52 14-65 35-86 (281)
74 3uq3_A Heat shock protein STI1 94.1 0.19 6.4E-06 31.8 6.2 51 15-65 171-221 (258)
75 3k9i_A BH0479 protein; putativ 94.0 0.11 3.8E-06 30.5 4.8 41 14-54 58-98 (117)
76 2fo7_A Synthetic consensus TPR 94.0 0.23 7.9E-06 27.7 6.0 51 15-65 33-83 (136)
77 1hh8_A P67PHOX, NCF-2, neutrop 94.0 0.2 6.9E-06 31.4 6.3 54 13-66 33-86 (213)
78 3rkv_A Putative peptidylprolyl 94.0 0.12 3.9E-06 31.8 5.0 49 14-62 94-142 (162)
79 2q7f_A YRRB protein; TPR, prot 93.9 0.21 7.1E-06 31.5 6.2 35 16-50 124-158 (243)
80 1a17_A Serine/threonine protei 93.9 0.19 6.4E-06 29.8 5.8 51 16-66 12-62 (166)
81 2vq2_A PILW, putative fimbrial 93.9 0.11 3.7E-06 32.2 4.8 39 16-54 41-79 (225)
82 2q7f_A YRRB protein; TPR, prot 93.8 0.22 7.7E-06 31.3 6.2 52 14-65 54-105 (243)
83 2r5s_A Uncharacterized protein 93.7 0.025 8.7E-07 35.6 1.6 36 15-51 38-73 (176)
84 2c2l_A CHIP, carboxy terminus 93.7 0.2 6.9E-06 34.3 6.3 52 15-66 2-53 (281)
85 3bee_A Putative YFRE protein; 93.6 0.18 6.1E-06 30.2 5.3 42 14-56 40-81 (93)
86 2y4t_A DNAJ homolog subfamily 93.5 0.12 4E-06 35.9 4.8 51 15-65 24-74 (450)
87 2ho1_A Type 4 fimbrial biogene 93.4 0.31 1.1E-05 31.1 6.5 39 16-54 174-212 (252)
88 2e2e_A Formate-dependent nitri 93.4 0.21 7.2E-06 30.7 5.5 47 14-60 41-87 (177)
89 2vq2_A PILW, putative fimbrial 93.2 0.31 1E-05 30.1 6.0 39 16-54 7-45 (225)
90 2e2e_A Formate-dependent nitri 93.2 0.23 8E-06 30.5 5.4 39 15-53 76-117 (177)
91 1fch_A Peroxisomal targeting s 93.1 0.29 1E-05 32.8 6.2 48 18-65 65-112 (368)
92 2gw1_A Mitochondrial precursor 93.0 0.25 8.5E-06 34.6 5.9 51 16-66 38-88 (514)
93 4eqf_A PEX5-related protein; a 92.9 0.32 1.1E-05 33.0 6.2 46 20-65 68-113 (365)
94 2ho1_A Type 4 fimbrial biogene 92.9 0.37 1.3E-05 30.7 6.2 51 15-65 69-119 (252)
95 3hym_B Cell division cycle pro 92.8 0.64 2.2E-05 30.3 7.4 53 14-66 233-285 (330)
96 1hxi_A PEX5, peroxisome target 92.7 0.13 4.3E-06 31.0 3.6 38 14-51 82-119 (121)
97 3cv0_A Peroxisome targeting si 92.7 0.38 1.3E-05 31.4 6.2 51 15-65 170-220 (327)
98 1xnf_A Lipoprotein NLPI; TPR, 92.5 0.28 9.5E-06 31.4 5.3 52 15-66 41-92 (275)
99 1ihg_A Cyclophilin 40; ppiase 92.4 0.26 8.7E-06 35.7 5.5 51 16-66 272-322 (370)
100 2yhc_A BAMD, UPF0169 lipoprote 92.4 0.61 2.1E-05 30.3 6.9 35 18-52 42-76 (225)
101 3uq3_A Heat shock protein STI1 92.3 0.32 1.1E-05 30.7 5.2 52 15-66 137-188 (258)
102 3cv0_A Peroxisome targeting si 92.1 0.5 1.7E-05 30.8 6.2 48 18-65 22-69 (327)
103 4gcn_A Protein STI-1; structur 92.1 0.33 1.1E-05 29.2 5.0 45 22-66 13-57 (127)
104 2y4t_A DNAJ homolog subfamily 92.0 0.46 1.6E-05 32.9 6.2 53 14-66 57-109 (450)
105 1p5q_A FKBP52, FK506-binding p 91.9 0.33 1.1E-05 34.2 5.5 51 15-65 228-278 (336)
106 1w3b_A UDP-N-acetylglucosamine 91.7 0.58 2E-05 32.1 6.4 52 14-65 64-115 (388)
107 4eqf_A PEX5-related protein; a 91.7 0.55 1.9E-05 31.8 6.2 50 16-65 212-261 (365)
108 1p5q_A FKBP52, FK506-binding p 91.7 0.5 1.7E-05 33.2 6.2 50 17-66 196-245 (336)
109 3fp2_A TPR repeat-containing p 91.6 0.58 2E-05 33.1 6.5 42 16-57 343-384 (537)
110 2gw1_A Mitochondrial precursor 91.6 0.26 8.8E-06 34.5 4.6 51 15-66 4-54 (514)
111 1hh8_A P67PHOX, NCF-2, neutrop 91.5 1.1 3.7E-05 27.9 7.1 38 14-51 68-105 (213)
112 1fch_A Peroxisomal targeting s 91.5 0.62 2.1E-05 31.2 6.2 50 16-65 216-265 (368)
113 1w3b_A UDP-N-acetylglucosamine 91.4 0.66 2.3E-05 31.8 6.5 50 16-65 236-285 (388)
114 1wao_1 Serine/threonine protei 90.7 0.72 2.4E-05 34.4 6.5 51 15-65 38-88 (477)
115 2vsy_A XCC0866; transferase, g 90.4 0.74 2.5E-05 34.1 6.3 51 15-65 21-71 (568)
116 3u4t_A TPR repeat-containing p 90.0 0.85 2.9E-05 29.3 5.7 35 20-54 77-111 (272)
117 1kt0_A FKBP51, 51 kDa FK506-bi 89.6 0.93 3.2E-05 33.4 6.3 52 14-65 348-399 (457)
118 2vsy_A XCC0866; transferase, g 89.5 0.92 3.1E-05 33.6 6.2 51 15-65 55-105 (568)
119 3qky_A Outer membrane assembly 89.2 1.2 4.3E-05 29.0 6.1 37 17-53 52-88 (261)
120 2h6f_A Protein farnesyltransfe 89.2 1.1 3.8E-05 32.7 6.4 40 15-54 129-169 (382)
121 1ihg_A Cyclophilin 40; ppiase 89.0 0.56 1.9E-05 33.9 4.6 52 14-65 304-355 (370)
122 2h6f_A Protein farnesyltransfe 88.9 0.55 1.9E-05 34.4 4.6 39 16-54 165-203 (382)
123 2if4_A ATFKBP42; FKBP-like, al 88.8 0.56 1.9E-05 33.1 4.4 36 19-54 232-267 (338)
124 1kt0_A FKBP51, 51 kDa FK506-bi 88.5 0.99 3.4E-05 33.2 5.8 50 17-66 317-366 (457)
125 4abn_A Tetratricopeptide repea 88.5 0.75 2.6E-05 33.9 5.1 52 15-66 256-307 (474)
126 2pzi_A Probable serine/threoni 88.0 1.7 5.8E-05 33.7 7.0 40 14-53 430-469 (681)
127 2ff4_A Probable regulatory pro 87.9 0.89 3.1E-05 33.5 5.2 51 18-68 172-222 (388)
128 2yhc_A BAMD, UPF0169 lipoprote 87.7 1.1 3.9E-05 28.9 5.1 52 15-66 2-56 (225)
129 4gyw_A UDP-N-acetylglucosamine 87.2 1.5 5E-05 35.2 6.4 52 15-66 109-160 (723)
130 2pzi_A Probable serine/threoni 87.1 0.98 3.4E-05 35.1 5.2 56 14-69 464-519 (681)
131 4gyw_A UDP-N-acetylglucosamine 86.9 0.67 2.3E-05 37.1 4.3 40 15-54 7-46 (723)
132 3ma5_A Tetratricopeptide repea 86.9 0.72 2.5E-05 26.5 3.4 38 14-51 38-75 (100)
133 1nzn_A CGI-135 protein, fissio 86.5 1.4 4.7E-05 28.8 4.9 43 16-58 73-115 (126)
134 3mv2_B Coatomer subunit epsilo 86.3 1.6 5.4E-05 32.1 5.7 52 15-66 98-151 (310)
135 4abn_A Tetratricopeptide repea 86.2 0.95 3.2E-05 33.3 4.5 39 15-53 100-139 (474)
136 1wao_1 Serine/threonine protei 85.5 2.4 8.2E-05 31.5 6.5 47 14-60 71-117 (477)
137 2xpi_A Anaphase-promoting comp 85.2 2.5 8.4E-05 30.4 6.2 51 15-65 371-421 (597)
138 1pc2_A Mitochondria fission pr 85.0 0.97 3.3E-05 30.3 3.7 43 15-57 69-111 (152)
139 2kat_A Uncharacterized protein 85.0 1.1 3.7E-05 25.7 3.5 38 14-51 50-87 (115)
140 2if4_A ATFKBP42; FKBP-like, al 85.0 0.91 3.1E-05 32.0 3.8 42 14-55 261-302 (338)
141 3ro2_A PINS homolog, G-protein 84.6 1.7 5.9E-05 27.9 4.7 37 16-52 4-40 (338)
142 2ond_A Cleavage stimulation fa 84.4 3.5 0.00012 27.9 6.4 52 14-65 96-148 (308)
143 2hr2_A Hypothetical protein; a 84.1 1.9 6.6E-05 28.8 4.9 35 17-51 11-45 (159)
144 3o48_A Mitochondria fission 1 83.3 2 6.8E-05 28.6 4.7 44 16-59 77-120 (134)
145 1y8m_A FIS1; mitochondria, unk 82.6 2.5 8.5E-05 28.5 4.9 44 15-58 75-118 (144)
146 3sf4_A G-protein-signaling mod 82.1 4 0.00014 27.3 5.8 40 13-52 5-44 (406)
147 3nf1_A KLC 1, kinesin light ch 81.7 1.8 6.3E-05 27.8 3.9 36 11-46 21-56 (311)
148 3mkr_A Coatomer subunit epsilo 80.0 3.3 0.00011 28.4 5.0 37 14-50 127-163 (291)
149 4b4t_Q 26S proteasome regulato 79.1 3.3 0.00011 28.5 4.7 37 16-52 3-39 (434)
150 1zu2_A Mitochondrial import re 78.7 4.6 0.00016 27.0 5.2 59 14-76 77-146 (158)
151 4a1s_A PINS, partner of inscut 76.9 6.8 0.00023 26.6 5.8 36 17-52 48-83 (411)
152 2hr2_A Hypothetical protein; a 76.6 4 0.00014 27.3 4.4 48 19-66 59-117 (159)
153 4g1t_A Interferon-induced prot 75.7 3.8 0.00013 28.5 4.3 40 14-53 244-283 (472)
154 3edt_B KLC 2, kinesin light ch 75.1 3 0.0001 26.2 3.4 31 16-46 126-156 (283)
155 1qqe_A Vesicular transport pro 74.9 15 0.0005 24.6 7.0 37 17-53 158-194 (292)
156 2cfu_A SDSA1; SDS-hydrolase, l 74.7 4.4 0.00015 32.2 4.9 54 12-65 444-497 (658)
157 3nf1_A KLC 1, kinesin light ch 69.6 4.5 0.00015 26.0 3.3 34 15-48 276-309 (311)
158 3edt_B KLC 2, kinesin light ch 68.7 4.7 0.00016 25.3 3.2 31 16-46 84-114 (283)
159 1ouv_A Conserved hypothetical 66.2 22 0.00075 22.9 6.2 47 15-64 180-230 (273)
160 1ouv_A Conserved hypothetical 65.5 13 0.00046 23.9 5.0 31 15-45 4-34 (273)
161 3ffl_A Anaphase-promoting comp 64.3 6.7 0.00023 26.9 3.5 27 19-45 65-91 (167)
162 2ond_A Cleavage stimulation fa 64.0 18 0.00061 24.3 5.6 32 15-46 201-232 (308)
163 2ooe_A Cleavage stimulation fa 63.7 18 0.00061 26.2 5.9 35 14-48 43-77 (530)
164 3ro3_A PINS homolog, G-protein 62.9 8 0.00027 21.8 3.2 31 18-48 10-40 (164)
165 2v5f_A Prolyl 4-hydroxylase su 61.4 21 0.00072 20.6 5.2 51 16-66 4-61 (104)
166 3u3w_A Transcriptional activat 59.0 21 0.00072 23.6 5.2 34 19-52 77-110 (293)
167 3q15_A PSP28, response regulat 58.3 12 0.00041 25.7 4.0 26 20-45 225-250 (378)
168 4g1t_A Interferon-induced prot 57.8 9.5 0.00033 26.5 3.4 39 14-52 331-369 (472)
169 2qfc_A PLCR protein; TPR, HTH, 56.9 33 0.0011 22.7 5.9 32 19-50 77-108 (293)
170 2ooe_A Cleavage stimulation fa 56.3 28 0.00095 25.2 5.8 39 13-51 317-355 (530)
171 3gw4_A Uncharacterized protein 56.2 11 0.00039 22.6 3.2 31 15-45 24-54 (203)
172 2yhe_A SEC-alkyl sulfatase; hy 59.8 2.6 8.8E-05 34.0 0.0 54 11-64 455-508 (668)
173 1zu2_A Mitochondrial import re 52.5 9.4 0.00032 25.4 2.5 41 14-54 33-83 (158)
174 3ro3_A PINS homolog, G-protein 51.7 29 0.001 19.3 4.5 31 17-47 89-119 (164)
175 4f3v_A ESX-1 secretion system 50.8 23 0.00078 25.4 4.5 34 16-49 207-240 (282)
176 3gw4_A Uncharacterized protein 49.1 18 0.00061 21.7 3.3 30 17-46 66-95 (203)
177 3ulq_A Response regulator aspa 48.4 33 0.0011 23.4 4.9 48 17-64 143-190 (383)
178 3ulq_A Response regulator aspa 47.8 32 0.0011 23.4 4.7 27 19-45 226-252 (383)
179 2cwy_A Hypothetical protein TT 47.4 29 0.00099 21.1 4.0 29 21-49 5-33 (94)
180 3u64_A Protein TP_0956; tetrat 45.4 19 0.00065 26.7 3.4 42 14-55 236-278 (301)
181 3cqc_A Nuclear pore complex pr 45.2 23 0.0008 25.3 3.8 29 17-45 200-228 (270)
182 3qwp_A SET and MYND domain-con 45.0 30 0.001 25.7 4.5 41 15-55 324-372 (429)
183 3q15_A PSP28, response regulat 44.9 39 0.0013 23.1 4.8 47 17-63 141-187 (378)
184 4a1s_A PINS, partner of inscut 44.9 17 0.00058 24.6 2.9 29 18-46 87-115 (411)
185 3qww_A SET and MYND domain-con 44.6 31 0.001 25.8 4.5 48 15-62 335-392 (433)
186 3ro2_A PINS homolog, G-protein 44.5 41 0.0014 21.2 4.6 29 19-47 305-333 (338)
187 1hz4_A MALT regulatory protein 43.8 44 0.0015 22.4 4.9 33 18-50 15-47 (373)
188 3u3w_A Transcriptional activat 43.1 33 0.0011 22.6 4.1 29 17-45 155-183 (293)
189 3rjv_A Putative SEL1 repeat pr 43.0 52 0.0018 20.8 5.0 47 15-64 16-62 (212)
190 1b89_A Protein (clathrin heavy 42.2 50 0.0017 25.5 5.5 40 13-52 203-242 (449)
191 3sf4_A G-protein-signaling mod 42.0 44 0.0015 22.1 4.6 33 18-50 188-220 (406)
192 3mv2_B Coatomer subunit epsilo 42.0 25 0.00087 25.6 3.6 52 17-71 214-276 (310)
193 2ifu_A Gamma-SNAP; membrane fu 41.4 23 0.0008 23.8 3.2 33 17-49 155-187 (307)
194 3dra_A Protein farnesyltransfe 38.7 46 0.0016 23.7 4.5 39 15-53 65-105 (306)
195 2vkj_A TM1634; membrane protei 38.6 51 0.0017 21.1 4.2 28 18-45 54-81 (106)
196 2qfc_A PLCR protein; TPR, HTH, 38.0 53 0.0018 21.6 4.5 31 18-48 197-227 (293)
197 3dra_A Protein farnesyltransfe 36.9 58 0.002 23.1 4.8 37 15-51 256-293 (306)
198 3n71_A Histone lysine methyltr 36.6 47 0.0016 25.2 4.5 42 15-56 346-395 (490)
199 3n71_A Histone lysine methyltr 35.9 33 0.0011 26.1 3.6 36 21-56 313-353 (490)
200 1dce_A Protein (RAB geranylger 35.4 40 0.0014 25.8 4.0 41 15-55 105-147 (567)
201 2p58_C Putative type III secre 33.2 55 0.0019 21.3 3.8 47 19-70 42-88 (116)
202 1qqe_A Vesicular transport pro 32.4 45 0.0016 22.2 3.5 35 19-53 201-235 (292)
203 2ifu_A Gamma-SNAP; membrane fu 32.3 87 0.003 20.9 4.9 35 18-53 196-230 (307)
204 1bpo_A Protein (clathrin); cla 31.8 1.6E+02 0.0053 23.5 6.8 59 11-69 355-429 (494)
205 2ijq_A Hypothetical protein; s 30.9 65 0.0022 21.6 4.1 32 18-49 33-64 (161)
206 3q7a_A Farnesyltransferase alp 30.6 1.1E+02 0.0038 22.4 5.6 36 16-51 87-123 (349)
207 3dss_A Geranylgeranyl transfer 30.5 66 0.0023 23.4 4.3 40 15-54 106-147 (331)
208 3qwp_A SET and MYND domain-con 29.5 65 0.0022 23.8 4.2 38 19-56 289-331 (429)
209 1mm0_A Termicin; termite, cyte 29.1 36 0.0012 18.0 2.0 13 30-42 1-13 (36)
210 1hz4_A MALT regulatory protein 28.8 94 0.0032 20.7 4.6 32 18-49 136-167 (373)
211 4gns_B Protein CSD3, chitin bi 26.8 1.2E+02 0.0041 24.8 5.6 55 17-71 337-392 (754)
212 3ly7_A Transcriptional activat 26.3 1.2E+02 0.0042 22.7 5.2 52 14-67 274-325 (372)
213 4f3v_A ESX-1 secretion system 26.2 37 0.0013 24.3 2.3 39 13-51 98-136 (282)
214 3ph0_C ASCG; type III secretio 26.2 37 0.0013 19.8 1.9 18 20-37 43-60 (61)
215 3txn_A 26S proteasome regulato 25.9 94 0.0032 23.3 4.5 27 19-45 101-127 (394)
216 1xi4_A Clathrin heavy chain; a 25.9 66 0.0023 29.2 4.1 40 13-52 1276-1315(1630)
217 4b4t_Q 26S proteasome regulato 25.0 1.1E+02 0.0039 20.6 4.5 30 17-46 135-164 (434)
218 2crb_A Nuclear receptor bindin 24.6 90 0.0031 19.7 3.6 25 19-43 17-41 (97)
219 2uwj_G Type III export protein 24.4 52 0.0018 21.4 2.5 47 19-70 41-87 (115)
220 1dce_A Protein (RAB geranylger 23.0 1E+02 0.0036 23.5 4.4 51 15-65 61-121 (567)
221 3qww_A SET and MYND domain-con 22.2 94 0.0032 23.1 3.9 31 15-45 377-410 (433)
222 1u84_A Hypothetical protein; s 22.0 53 0.0018 20.3 2.1 31 16-46 46-81 (90)
223 1xi4_A Clathrin heavy chain; a 21.0 2.2E+02 0.0075 25.9 6.4 59 11-69 355-429 (1630)
No 1
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.56 E-value=1.3e-07 Score=63.09 Aligned_cols=68 Identities=47% Similarity=0.948 Sum_probs=53.4
Q ss_pred CCCCCCC-------CCCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcchhh
Q psy3703 4 KYEVPSL-------SVLPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSNSKL 71 (79)
Q Consensus 4 ky~~p~~-------~~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n~LF 71 (79)
||.+|.. .++.+|+|++..+|+.+|.+++|++|.++.+++++.+|.+..++.....|+++++...+-.
T Consensus 2 ~y~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~ 76 (330)
T 3hym_B 2 SYNKPSETVIPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELF 76 (330)
T ss_dssp ------------------CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHH
T ss_pred CCCcchhhhhHHHHhhchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHH
Confidence 4665555 7889999999999999999999999999999999999999999999999999998755443
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.45 E-value=0.00027 Score=44.29 Aligned_cols=54 Identities=9% Similarity=0.140 Sum_probs=44.8
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
||++++|-...+..++.+|+|+++.+.-+++|+.||-+..++-.--.++.+++.
T Consensus 1 ~ge~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 54 (184)
T 3vtx_A 1 MGETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGL 54 (184)
T ss_dssp ---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCC
Confidence 689999999999999999999999999999999999998777665556666665
No 3
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.97 E-value=0.003 Score=37.07 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=45.2
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+|+++....|..++.+++|+++.+..+++++.||.+....-..=-|+..+|.
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 56 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDR 56 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999999988876665556666664
No 4
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.85 E-value=0.0029 Score=41.21 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
|+|++...|+.++.+++|+++.++.+++++.+|-+..++-.--.|.+++|.
T Consensus 2 n~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~ 52 (272)
T 3u4t_A 2 NDDVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAK 52 (272)
T ss_dssp ---CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhh
Confidence 788999999999999999999999999999999988877666667777665
No 5
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.65 E-value=0.0079 Score=33.69 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=42.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++.+++|+++.+..+++++.+|.+..++-..-.++..++.
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 87 (118)
T 1elw_A 35 PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNR 87 (118)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhh
Confidence 45788888899999999999999999999999998877766655556666654
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.0088 Score=35.30 Aligned_cols=53 Identities=9% Similarity=0.173 Sum_probs=40.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+|+++...+|..++..++|+++.+..+++++.||-+...+-..--|+..+|.
T Consensus 35 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 87 (126)
T 3upv_A 35 PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKE 87 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhC
Confidence 45778888888888888888888888888888888876665555555555554
No 7
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.55 E-value=0.0033 Score=37.35 Aligned_cols=53 Identities=13% Similarity=0.123 Sum_probs=46.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++.+++|+++.+..+++++.+|-+..++-..--|++.+|.
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 76 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGR 76 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCC
Confidence 35678889999999999999999999999999999998888777778888775
No 8
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.48 E-value=0.0096 Score=36.52 Aligned_cols=53 Identities=19% Similarity=0.242 Sum_probs=35.8
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+|+++...+|..++..++|++|.+..+++++.||-+..++-.--.|+.++|.
T Consensus 44 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 96 (126)
T 4gco_A 44 PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMRE 96 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCC
Confidence 35667777777777777777777777777777777776655544445555553
No 9
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.36 E-value=0.014 Score=35.69 Aligned_cols=52 Identities=6% Similarity=-0.061 Sum_probs=30.3
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+|+++....+..++.+++|+++.+..+++++.||.+...+-..-.|+..+|.
T Consensus 50 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 50 YDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGD 101 (142)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC
Confidence 4566666666666666666666666666666666665544333334444443
No 10
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.36 E-value=0.016 Score=31.72 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.++....|..++.+++|+++.+..++.++.+|-+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 43 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 43 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 34444445555555555555555555555555443
No 11
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.27 E-value=0.017 Score=32.13 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=39.9
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC--CCCchHHHHHHHHhh-CC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPY--HTACLPLHIACLVEM-NK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy--n~~~LP~hiacL~EL-~~ 66 (79)
.++.++....|..++.+++|+++.+..+++++.+|- +..++-..-.++..+ +.
T Consensus 37 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~ 92 (112)
T 2kck_A 37 PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGK 92 (112)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSC
T ss_pred cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCC
Confidence 456788888888888888888888888888888888 666555555555555 43
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.26 E-value=0.0064 Score=39.29 Aligned_cols=50 Identities=12% Similarity=-0.010 Sum_probs=29.5
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++.+...|..++.+++|+++.+..+++++.||.+....-.-=.|+.++|
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g 84 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE 84 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc
Confidence 44566666666666666666666666666666666555444444444444
No 13
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.22 E-value=0.018 Score=33.81 Aligned_cols=51 Identities=12% Similarity=-0.047 Sum_probs=27.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++.+++|+++....+++++.+|-+..++-..--|+..++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 91 (137)
T 3q49_B 41 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME 91 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHh
Confidence 345555666666666666666666666666666655444333333333333
No 14
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.22 E-value=0.019 Score=33.48 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=43.1
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++.+++|+++.+..+++++.+|-+....-..--++..+|.
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 68 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGD 68 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCC
Confidence 46889999999999999999999999999999999886655444445555553
No 15
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.019 Score=32.45 Aligned_cols=37 Identities=19% Similarity=0.103 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
.+++++....|..++..++|+++.+..+++++.+|-+
T Consensus 35 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 35 PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 4567888888888888888888888888888888877
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.18 E-value=0.0079 Score=36.76 Aligned_cols=52 Identities=13% Similarity=0.220 Sum_probs=42.4
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+|+++...+|..++..++|++|.+..++.++.+|-+....+....++..+|
T Consensus 39 p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 39 PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 4678889999999999999999999999999999988877666554555444
No 17
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.16 E-value=0.021 Score=33.55 Aligned_cols=53 Identities=15% Similarity=0.359 Sum_probs=45.8
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
..+++.....|..++.+++|+++...-+++++.+|-+..++-..-.|+..++.
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 58 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ 58 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcC
Confidence 35788999999999999999999999999999999987777666667776664
No 18
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.16 E-value=0.011 Score=36.54 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=42.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+.++...+|..++..++|++|...++++|+.||-+..++-.--.|+..+|.
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~ 112 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWK 112 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhc
Confidence 3457888889999999999999999999999999888777666666666664
No 19
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.16 E-value=0.018 Score=35.65 Aligned_cols=51 Identities=14% Similarity=-0.034 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++..++|+++.+..+++++.||-+...+-..-.++..++
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 93 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMA 93 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 456666666666666666666666666666666665544444333444444
No 20
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.012 Score=33.24 Aligned_cols=52 Identities=10% Similarity=0.273 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+.+.....|..++.+++|+++.+.-+++++.+|-+..++-..-.|+..+|.
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 53 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGE 53 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Confidence 3577888999999999999999999999999999987666555556666664
No 21
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.07 E-value=0.017 Score=35.84 Aligned_cols=54 Identities=9% Similarity=-0.169 Sum_probs=42.7
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
-.++.++....|..++.+++|+++.+..+++++.||.+..++-.---++..+|.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~ 156 (184)
T 3vtx_A 103 NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL 156 (184)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC
Confidence 356788999999999999999999999999999999887665444444455553
No 22
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.02 E-value=0.022 Score=36.72 Aligned_cols=53 Identities=8% Similarity=0.038 Sum_probs=46.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+|++.....+..++.+++|+++.+..++.++.||-+...+--.=.|+..+|.
T Consensus 67 P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~ 119 (151)
T 3gyz_A 67 FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKA 119 (151)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999999998876655566666665
No 23
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.98 E-value=0.012 Score=36.01 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=43.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.+.+...|..++.+++|+++.+..+++++.+|.+...+-..-.|+.+++.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 67 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGL 67 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhh
Confidence 4567889999999999999999999999999999987766554556666654
No 24
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.96 E-value=0.026 Score=35.30 Aligned_cols=40 Identities=5% Similarity=-0.164 Sum_probs=22.6
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+|+++....+..++.+++|+++.+..+++++.||-+...+
T Consensus 53 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 92 (148)
T 2vgx_A 53 YDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFP 92 (148)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHH
Confidence 4555555555555555666666555555555555554443
No 25
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.016 Score=34.17 Aligned_cols=51 Identities=8% Similarity=0.156 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+.+....+|..++.+++|+++.+.-++.++.+|-+..++-..-.|+..++.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~ 53 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMS 53 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcC
Confidence 457788999999999999999999999999999988777666667777764
No 26
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.88 E-value=0.023 Score=32.66 Aligned_cols=53 Identities=13% Similarity=0.153 Sum_probs=34.2
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.++.++....|..++.+++|+++.+..+++++.+|-+..++-..-.++.+++.
T Consensus 47 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~ 99 (133)
T 2lni_A 47 PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKD 99 (133)
T ss_dssp TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhh
Confidence 34667777777777777777777777777777777665554444444444443
No 27
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.85 E-value=0.021 Score=35.31 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=46.6
Q ss_pred CCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 12 VLPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 12 ~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.-..+.+.+...|..++.+++|+++.+.-+++++.+|-+..++-..-.|++.++.
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 60 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQ 60 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccC
Confidence 3456788999999999999999999999999999999987776666667777664
No 28
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.84 E-value=0.01 Score=33.06 Aligned_cols=53 Identities=13% Similarity=0.206 Sum_probs=44.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.++.++....|..++.+++|+++...-+++++.+|.+..++-..-.++.+++.
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~ 55 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLER 55 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccC
Confidence 35778889999999999999999999999999999887766555556666654
No 29
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.81 E-value=0.025 Score=39.33 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=50.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSN 68 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n 68 (79)
.+++++..+.|..+..+++|+++.+.-+++|+.||.+..++--.+.++.++|...
T Consensus 197 p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~ 251 (291)
T 3mkr_A 197 SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPP 251 (291)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCH
Confidence 4689999999999999999999999999999999999999887777888888753
No 30
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.80 E-value=0.027 Score=31.38 Aligned_cols=52 Identities=6% Similarity=0.096 Sum_probs=42.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++++.....|..++.+++|+++....+++++.+|.+...+-..-.++..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 53 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGD 53 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhcc
Confidence 4578889999999999999999999999999999886665555555555554
No 31
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.69 E-value=0.041 Score=34.31 Aligned_cols=54 Identities=6% Similarity=-0.094 Sum_probs=42.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKS 67 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~ 67 (79)
.+|+++....|..++.+++|+++...-+++++.||-+..++-..-.++.+++..
T Consensus 62 p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 62 ERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCh
Confidence 467888888888888888888888888888888888877665544566677754
No 32
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.68 E-value=0.048 Score=30.79 Aligned_cols=53 Identities=19% Similarity=0.128 Sum_probs=34.1
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++.+++|+++.+..+++++.+|.+..++-..--++..++.
T Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (131)
T 2vyi_A 43 PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNK 95 (131)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCC
Confidence 34567777777777777777777777777777777665544333334444443
No 33
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.64 E-value=0.051 Score=30.66 Aligned_cols=40 Identities=10% Similarity=-0.083 Sum_probs=22.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+++++....|..++..++++++.+.-+++++.+|-+..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 78 AYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 3455555555555555555555555555555555444333
No 34
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.58 E-value=0.02 Score=35.87 Aligned_cols=52 Identities=19% Similarity=0.225 Sum_probs=43.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.+.....|..++.+++|+++.+.-+++++.||.+...+-..-.|+.++|.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 70 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQ 70 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhh
Confidence 4567888999999999999999999999999999988777554456666654
No 35
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.50 E-value=0.059 Score=30.14 Aligned_cols=51 Identities=12% Similarity=0.119 Sum_probs=35.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.++....|..++..++++++..+.+++++.+|-+...+-...-++.+++
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 91 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 91 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhc
Confidence 567777788888888888888888888888887766554444444444444
No 36
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=95.44 E-value=0.11 Score=32.59 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=44.7
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC--chHHHHHHHHhhCCcc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA--CLPLHIACLVEMNKSN 68 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~--~LP~hiacL~EL~~~n 68 (79)
.+|+++....|..+..+++++++.+.-+++++.+|-+.. ..-....++..+|...
T Consensus 105 P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 105 PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999997643 4444455666677644
No 37
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.42 E-value=0.039 Score=36.15 Aligned_cols=40 Identities=20% Similarity=0.255 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+|++.....+..++.+++++++....+++++.||-+...+
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 42 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEAL 42 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 4455555555555555555555555555555555554443
No 38
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.42 E-value=0.06 Score=32.10 Aligned_cols=39 Identities=8% Similarity=-0.084 Sum_probs=22.6
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
++.++....|..++..++|+++.+..+++++.+|.+..+
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 83 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKG 83 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHH
Confidence 345555566666666666666666666666666555443
No 39
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.40 E-value=0.027 Score=34.46 Aligned_cols=49 Identities=14% Similarity=0.265 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+....++..+|.+++|+++.+.-++.++.||.+..++-.--.|+.++|.
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 62 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLME 62 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhcc
Confidence 3455678899999999999999999999999998777666667777775
No 40
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.40 E-value=0.056 Score=30.91 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=41.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
.++.++....|..++..++|+++.+..+++++.+|-+....-..--++..+
T Consensus 81 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999998776554444444433
No 41
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.39 E-value=0.019 Score=34.67 Aligned_cols=44 Identities=30% Similarity=0.384 Sum_probs=33.1
Q ss_pred CCCChHHHHHHHHHHHHhCC---HHHHHHHHHHHHhcCCCCCCchHH
Q psy3703 13 LPDNLDMMVANAERLYYGCA---YKKCFTITEQVLSRDPYHTACLPL 56 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~---f~~c~~it~~iL~~Dpyn~~~LP~ 56 (79)
.++|+|++...|+.+|.+++ ..++..+.++.|+.||-+...+-+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~ 48 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSL 48 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHH
Confidence 35778888888888877766 578888888888888877666543
No 42
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=95.37 E-value=0.034 Score=36.79 Aligned_cols=51 Identities=16% Similarity=-0.022 Sum_probs=25.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++..++|+++.+..+++++.+|.+..++-..-.++..+|
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (359)
T 3ieg_A 35 DNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQG 85 (359)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcC
Confidence 345555555555555555555555555555555555444433333333333
No 43
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.31 E-value=0.062 Score=31.11 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
++....|..++.+++|+++.+..+++++.+|-+.
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~ 73 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD 73 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc
Confidence 6788888888888888888888888888888774
No 44
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=95.29 E-value=0.12 Score=29.00 Aligned_cols=41 Identities=12% Similarity=0.072 Sum_probs=33.1
Q ss_pred CCChH-HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 14 PDNLD-MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 14 ~~N~D-vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
.++++ +....|..++.+++|+++.+.-+++++.||-+....
T Consensus 31 p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 31 PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 35667 888888888888888888888888888888777654
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.28 E-value=0.048 Score=32.98 Aligned_cols=40 Identities=8% Similarity=-0.122 Sum_probs=21.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+|.+.....|..+...++++++.+..+++++.||-+...+
T Consensus 49 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 49 EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3455555555555555555555555555555555554433
No 46
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.27 E-value=0.083 Score=29.49 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+.....|..++..++|+++.++.+++++.+|.+..++-....++.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 57 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG 57 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhC
Confidence 4556666666666666666666666666666655544444444444444
No 47
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.26 E-value=0.042 Score=29.89 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=37.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
.+++++....|..++..++|+++.+..+++++.+|-+....
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 40 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 46789999999999999999999999999999999876544
No 48
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.20 E-value=0.036 Score=36.30 Aligned_cols=52 Identities=15% Similarity=0.060 Sum_probs=41.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+++++....|..+..+++++++.+..+++++.+|-+...+-..-.++.++|.
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~ 200 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGK 200 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccC
Confidence 7888999999999999999999999999999999887766655566666664
No 49
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.13 E-value=0.05 Score=31.83 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=18.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
++.+.....|..++.+++|+++.+.-+++++.+|.+
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 61 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP 61 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence 444555555555555555555555555555555543
No 50
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=95.02 E-value=0.08 Score=34.86 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=32.6
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
.++++.+...|..++.+++|+++.+..+++++.+|.+..
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 50 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW 50 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc
Confidence 467888888888888888888888888888888887743
No 51
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.98 E-value=0.11 Score=33.40 Aligned_cols=51 Identities=14% Similarity=0.016 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++..++|+++.+..+++++.+|.+..++-..-.++.++|
T Consensus 75 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g 125 (275)
T 1xnf_A 75 DMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGG 125 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhc
Confidence 455566666666666666666666666666666655555444444444444
No 52
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=94.96 E-value=0.088 Score=38.11 Aligned_cols=55 Identities=29% Similarity=0.575 Sum_probs=50.9
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSN 68 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n 68 (79)
.+|+++....|..++.+++++++.++.+++++.+|.+..++-..+.|+.++|...
T Consensus 302 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 356 (597)
T 2xpi_A 302 EKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKN 356 (597)
T ss_dssp GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHH
Confidence 4799999999999999999999999999999999999999999999998888643
No 53
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.93 E-value=0.042 Score=35.31 Aligned_cols=50 Identities=4% Similarity=-0.041 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
+++++....|..++.+++|+++.+..+++++.+|-+....+....+.+.+
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 123 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKE 123 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH
Confidence 45667777777777777777777777777777776665444443333333
No 54
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.89 E-value=0.06 Score=34.98 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=36.4
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLP 55 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP 55 (79)
.+++++....|..++.+++++++.+..+++++.||-+...+-
T Consensus 85 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~ 126 (208)
T 3urz_A 85 PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANI 126 (208)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 468899999999999999999999999999999998876553
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=94.89 E-value=0.058 Score=30.55 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
+++++....|..++.+++|+++....+++++.+|-+.
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (131)
T 1elr_A 36 TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (131)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccc
Confidence 3455555556666666666666666666665555433
No 56
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.85 E-value=0.082 Score=30.86 Aligned_cols=50 Identities=14% Similarity=0.046 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.++....|..++.+++|+++.+..+++++.+|-+..++-..--++..++.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 114 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGR 114 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCC
Confidence 78899999999999999999999999999999886666555556666664
No 57
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=94.83 E-value=0.03 Score=33.47 Aligned_cols=39 Identities=21% Similarity=0.332 Sum_probs=36.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.+.||....|..+|.++++++++...+++|+.+|-|...
T Consensus 44 ~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 44 DKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 578999999999999999999999999999999998655
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.82 E-value=0.11 Score=30.90 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
.++....|..++.+++++++.+..+++++.+|.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 74 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPD 74 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 333333333333334444443333333333333
No 59
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=94.68 E-value=0.059 Score=30.51 Aligned_cols=51 Identities=10% Similarity=0.069 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
..+.....|..++.+++|+++...-+++++.+|.+..++-..-.++.+++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~ 53 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGD 53 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhcc
Confidence 457788899999999999999999999999999887665544455566664
No 60
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=94.62 E-value=0.1 Score=29.25 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
++++....|..++.+++++++.++.++.++.+|-+.
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 103 (136)
T 2fo7_A 68 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA 103 (136)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 344445555555555555555555555555555443
No 61
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.60 E-value=0.089 Score=29.51 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC-chHHHHHHHHhhCC
Q psy3703 21 VANAERLYYGCAYKKCFTITEQVLSRDPYHTA-CLPLHIACLVEMNK 66 (79)
Q Consensus 21 ~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~-~LP~hiacL~EL~~ 66 (79)
+.+|..++.+++|+++.+..+++++.+|-+.. .+-..=.|+..++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~ 50 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGD 50 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999998866 44443345555554
No 62
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=94.57 E-value=0.076 Score=36.46 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=44.8
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+.++.+.+...|..+..+++++++.++.+++|+.||-+...+-..--++.++|.
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~ 166 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNR 166 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCC
Confidence 567889999999999999999999999999999999987776555556666554
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.55 E-value=0.15 Score=30.38 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
++.++....|..++..++++++.+..+++++.+|-+..+.
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 113 (186)
T 3as5_A 74 DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVR 113 (186)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHH
Confidence 3445555555555555555555555555555555444333
No 64
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=94.53 E-value=0.12 Score=35.48 Aligned_cols=55 Identities=11% Similarity=0.058 Sum_probs=45.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC--CCchHHHHHHHHhhCCcc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYH--TACLPLHIACLVEMNKSN 68 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn--~~~LP~hiacL~EL~~~n 68 (79)
.+|+++....|..+..+++++++.+.-.++++.||-+ ....-....++-.+|...
T Consensus 216 P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 216 PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999999999987 545555555666666543
No 65
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=94.53 E-value=0.097 Score=37.14 Aligned_cols=53 Identities=13% Similarity=0.134 Sum_probs=45.2
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+|+++....|..++.+++|++|.+..+++++.||-+..++-..-.++..+|.
T Consensus 56 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 108 (537)
T 3fp2_A 56 PNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGN 108 (537)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCC
Confidence 46889999999999999999999999999999999888777666667777665
No 66
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.32 E-value=0.1 Score=33.13 Aligned_cols=51 Identities=10% Similarity=0.026 Sum_probs=32.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++..++|+++.+.-+++++.+|-+..+.-..-.|...++
T Consensus 120 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 170 (198)
T 2fbn_A 120 NNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLK 170 (198)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHH
Confidence 456666666666666777777766666666666666655555555555543
No 67
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.30 E-value=0.15 Score=32.61 Aligned_cols=34 Identities=9% Similarity=0.096 Sum_probs=23.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDP 48 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp 48 (79)
.|++.+..++..++.+++|+++.+..+++++.+|
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 38 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTN 38 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccC
Confidence 3566667777777777777777777777777666
No 68
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.30 E-value=0.14 Score=32.50 Aligned_cols=49 Identities=14% Similarity=-0.008 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++....|..++..++|++|....+++++.+|.+..++-.--.++..++.
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~ 137 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGF 137 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccc
Confidence 8889999999999999999999999999999887776555556666664
No 69
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.22 E-value=0.11 Score=30.03 Aligned_cols=35 Identities=11% Similarity=-0.054 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
+.+...|..++.+++|+++.+.-+++++.+|.+..
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~ 37 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY 37 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc
Confidence 45678899999999999999999999999998773
No 70
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=94.22 E-value=0.15 Score=33.67 Aligned_cols=51 Identities=10% Similarity=0.160 Sum_probs=42.4
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
|++.....|..++.+++|+++.+..+++++.+|-+..++-.--.|++.+|.
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~ 52 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGK 52 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccC
Confidence 678889999999999999999999999999999887766666666666664
No 71
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=94.20 E-value=0.056 Score=33.65 Aligned_cols=51 Identities=6% Similarity=-0.173 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++......|..++.+++|+++.+..+++++.||-+..+.-.-=-|+..++.
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 344557789999999999999999999999999998776555555555554
No 72
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.15 E-value=0.077 Score=34.45 Aligned_cols=44 Identities=18% Similarity=0.250 Sum_probs=37.7
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 23 NAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 23 ~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.|..++.+++|+++.+..+++++.||-+..++-..-.++.++|.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 103 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQ 103 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999988776665566666654
No 73
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=94.07 E-value=0.15 Score=34.88 Aligned_cols=52 Identities=13% Similarity=0.002 Sum_probs=36.1
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+++++...+|..++..++|+++.+..+++++.+|-+...+-..-.++..+|
T Consensus 35 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 86 (281)
T 2c2l_A 35 PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEME 86 (281)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 3567777788888888888888888888888888877655544334444444
No 74
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.06 E-value=0.19 Score=31.76 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=30.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....|..++..++|+++.+..+++++.+|-+..++-.---++..+|
T Consensus 171 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 221 (258)
T 3uq3_A 171 EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK 221 (258)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 455666666666666666666666666666666665544433333444444
No 75
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=94.03 E-value=0.11 Score=30.48 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=37.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
.+++++....|..++..++++++.+..++.++.+|-+....
T Consensus 58 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 58 PNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 56899999999999999999999999999999999876544
No 76
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=94.02 E-value=0.23 Score=27.70 Aligned_cols=51 Identities=10% Similarity=0.072 Sum_probs=37.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.++....|..++.+++++++.++.+++++.+|-+..+.-....++.+.+
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 83 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc
Confidence 567778888888888899999998888888888876554443344444444
No 77
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=94.02 E-value=0.2 Score=31.37 Aligned_cols=54 Identities=6% Similarity=-0.136 Sum_probs=42.7
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+..++++....|..++.+++|+++.+..++.++.+|.+..++-..-.++.+++.
T Consensus 33 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~ 86 (213)
T 1hh8_A 33 QDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEK 86 (213)
T ss_dssp SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHccc
Confidence 345789999999999999999999999999999999876655444445555553
No 78
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.98 E-value=0.12 Score=31.81 Aligned_cols=49 Identities=8% Similarity=0.059 Sum_probs=41.8
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLV 62 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~ 62 (79)
.+|++....+|..++..++|+++.+..+++++.||-+...+--.++-+.
T Consensus 94 p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~ 142 (162)
T 3rkv_A 94 ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVT 142 (162)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999998855555555443
No 79
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.92 E-value=0.21 Score=31.45 Aligned_cols=35 Identities=11% Similarity=-0.019 Sum_probs=15.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
++++....|..++.+++++++.+..+++++.+|-+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND 158 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 33444444444444444444444444444444433
No 80
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.91 E-value=0.19 Score=29.83 Aligned_cols=51 Identities=8% Similarity=0.143 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
..+.....|..++.+++|+++.+..+++++.+|.+..++-..-.|+..++.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~ 62 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTEC 62 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCC
Confidence 456778899999999999999999999999999887666555556666654
No 81
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.90 E-value=0.11 Score=32.15 Aligned_cols=39 Identities=23% Similarity=0.043 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+.++....|..++.+++++++.+..+++++.+|-+..++
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 79 (225)
T 2vq2_A 41 NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEIN 79 (225)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHH
Confidence 444555555555555555555555555555555444333
No 82
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=93.79 E-value=0.22 Score=31.28 Aligned_cols=52 Identities=10% Similarity=-0.017 Sum_probs=32.1
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.++.++....|..++..++++++.+..+++++.+|.+..+.-....++..++
T Consensus 54 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 105 (243)
T 2q7f_A 54 KEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE 105 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc
Confidence 3456667777777777777777777777777777765544433333444444
No 83
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=93.73 E-value=0.025 Score=35.56 Aligned_cols=36 Identities=11% Similarity=0.066 Sum_probs=26.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
+|+++....|..+..+++++++.+..+++++.+| +.
T Consensus 38 ~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~ 73 (176)
T 2r5s_A 38 SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DN 73 (176)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-Ch
Confidence 5667777777777777777777777777777777 44
No 84
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.66 E-value=0.2 Score=34.27 Aligned_cols=52 Identities=15% Similarity=0.363 Sum_probs=44.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.+.+...|..++.+++|+++.+.-+++++.+|.+...+-..-.|+..+|.
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 53 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ 53 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC
Confidence 5778899999999999999999999999999999987776666666666664
No 85
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.65 E-value=0.18 Score=30.22 Aligned_cols=42 Identities=10% Similarity=0.035 Sum_probs=35.8
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPL 56 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~ 56 (79)
.+|+..+.-.+..+|.+++|+++.+.=+++|+.||- ..-.+.
T Consensus 40 p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~-~~~~~~ 81 (93)
T 3bee_A 40 PYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP-NLDRVT 81 (93)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT-TCCHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CccHHH
Confidence 467788888999999999999999999999999998 443433
No 86
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=93.45 E-value=0.12 Score=35.93 Aligned_cols=51 Identities=8% Similarity=0.137 Sum_probs=30.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++++.....|..++.+++|+++.++-+++++.+|-+..++-....|+..+|
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g 74 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMG 74 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCC
Confidence 345556666666666666666666666666666665555444444555444
No 87
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=93.40 E-value=0.31 Score=31.08 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=19.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
++++....|..++.+++++++.+..+++++.+|.+...+
T Consensus 174 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 212 (252)
T 2ho1_A 174 QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSL 212 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 344444555555555555555555555555555444333
No 88
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.38 E-value=0.21 Score=30.75 Aligned_cols=47 Identities=13% Similarity=0.107 Sum_probs=33.7
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIAC 60 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiac 60 (79)
.+++++....|..++..++|+++.+.-+++++.+|-+...+-..-.+
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 41 PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATV 87 (177)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 45777888888888888888888888888888888765544433333
No 89
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.23 E-value=0.31 Score=30.06 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
++++....|..++.+++++++.+..+++++.+|-+..++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 45 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAW 45 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHH
Confidence 344555555555555555555555555555555444333
No 90
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.17 E-value=0.23 Score=30.54 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=20.4
Q ss_pred CChHHHHHHHHH-HHHhCCH--HHHHHHHHHHHhcCCCCCCc
Q psy3703 15 DNLDMMVANAER-LYYGCAY--KKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 15 ~N~Dvl~~~Ae~-ly~~~~f--~~c~~it~~iL~~Dpyn~~~ 53 (79)
+|+++....|.. ++.++++ +++.+..+++++.+|.+..+
T Consensus 76 ~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 117 (177)
T 2e2e_A 76 ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITA 117 (177)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHH
Confidence 345555555555 3455555 55555555555555554433
No 91
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=93.08 E-value=0.29 Score=32.83 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+....+|..++.+++|+++.+..+++++.+|-+..++-.--.|+..+|
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 112 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENE 112 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCc
Confidence 344555555555555555555555555555555444443333444443
No 92
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=93.00 E-value=0.25 Score=34.60 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=37.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
|+.+....|..++..++|++|.+..+++++.+|-+..++-.-..++..+|.
T Consensus 38 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 88 (514)
T 2gw1_A 38 DPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGK 88 (514)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhh
Confidence 567777777888888888888888888888877776666555556666654
No 93
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.90 E-value=0.32 Score=33.05 Aligned_cols=46 Identities=9% Similarity=0.005 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 20 MVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 20 l~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
....|..++.+++|+++.++.+++++.+|-+..++-..-.++..+|
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 113 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENE 113 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCC
Confidence 5566666666666666666666666666655444433333344333
No 94
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=92.85 E-value=0.37 Score=30.72 Aligned_cols=51 Identities=18% Similarity=-0.013 Sum_probs=27.9
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.++....|..++..++++++.+..+++++.+|-+..++-....++..++
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 119 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQK 119 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh
Confidence 345556666666666666666666666666666655444333333333333
No 95
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.79 E-value=0.64 Score=30.34 Aligned_cols=53 Identities=9% Similarity=-0.083 Sum_probs=39.2
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++..++++++.+..+++++.+|-+..++-.---++..+|.
T Consensus 233 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 285 (330)
T 3hym_B 233 DKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN 285 (330)
T ss_dssp TTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc
Confidence 55667888888888888888888888888888888776666555555555554
No 96
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=92.70 E-value=0.13 Score=31.05 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=30.4
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.+++++....|..+...++++++.+..+++++.+|-+.
T Consensus 82 P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 82 PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 46889999999999999999999999999999999764
No 97
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.69 E-value=0.38 Score=31.38 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=30.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.++....|..++..++++++.+..+++++.+|-+..++-....++..+|
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 220 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGN 220 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 355666666666666666666666666666666665544444444444443
No 98
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=92.54 E-value=0.28 Score=31.45 Aligned_cols=52 Identities=8% Similarity=-0.076 Sum_probs=43.2
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+++++....|..++.+++|+++.+..+++++.+|-+..++-..-.++.++|.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC
Confidence 3678899999999999999999999999999999987766555555555554
No 99
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=92.39 E-value=0.26 Score=35.74 Aligned_cols=51 Identities=12% Similarity=0.067 Sum_probs=33.9
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+.++....|..++.+++|++|.+.++++|+.||-+..++-..-.|+.+++.
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 322 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKE 322 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccC
Confidence 456667777777777777777777777777777766555444444555543
No 100
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=92.38 E-value=0.61 Score=30.26 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
+.....|..+|.+++|+++.+.-+++++.+|-+..
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc
Confidence 56666677777777777777777777777776654
No 101
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=92.28 E-value=0.32 Score=30.66 Aligned_cols=52 Identities=8% Similarity=0.170 Sum_probs=42.3
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.++....|..++.+++|+++.+..+++++.+|-+..++-.--.++..+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 188 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMS 188 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCC
Confidence 4567888999999999999999999999999999887655555555555554
No 102
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.14 E-value=0.5 Score=30.84 Aligned_cols=48 Identities=8% Similarity=-0.075 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+....+|..++.+++|+++..+.+++++.+|-+..++-.-..++..++
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 69 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENE 69 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 344566666666666666666666666666655544443333444443
No 103
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=92.10 E-value=0.33 Score=29.24 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=35.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 22 ANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 22 ~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.....+|.+++|+++.+.-++.++.||-+..++---=.|++++|.
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~ 57 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKK 57 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhh
Confidence 346679999999999999999999999887665544456666664
No 104
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=92.01 E-value=0.46 Score=32.91 Aligned_cols=53 Identities=19% Similarity=0.041 Sum_probs=42.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.+++++....|..++..++++++.+..+++++.+|-+..++-....++..+|.
T Consensus 57 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~ 109 (450)
T 2y4t_A 57 PDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK 109 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC
Confidence 45788889999999999999999999999999999886666555556666554
No 105
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.85 E-value=0.33 Score=34.19 Aligned_cols=51 Identities=14% Similarity=0.090 Sum_probs=32.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+|++....+|..++..++|+++.+.-+++++.+|-+..+.-..-.++..++
T Consensus 228 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~ 278 (336)
T 1p5q_A 228 NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIR 278 (336)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 466677777777777777777777777777777766655444333444443
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.69 E-value=0.58 Score=32.07 Aligned_cols=52 Identities=12% Similarity=-0.026 Sum_probs=33.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.++.+.....+..++.+++++++.+.-+++++.+|-+...+-.-..++...|
T Consensus 64 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 115 (388)
T 1w3b_A 64 PLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAG 115 (388)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcC
Confidence 3456666777777777777777777777777777766554444444444444
No 107
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=91.68 E-value=0.55 Score=31.84 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++++....|..++.+++|+++.+..+++++.+|-+..++-..-.++.++|
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 261 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGD 261 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 45566666666666666666666666666666655544433333444433
No 108
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.65 E-value=0.5 Score=33.25 Aligned_cols=50 Identities=14% Similarity=0.034 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
.++....|..++.+++|++|.+.++++|+.||-+...+-.---++.+++.
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~ 245 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVND 245 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC
Confidence 58899999999999999999999999999999987776555555555554
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.63 E-value=0.58 Score=33.09 Aligned_cols=42 Identities=12% Similarity=0.048 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHH
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLH 57 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~h 57 (79)
++++....|..++..++++++.++.+++++.+|-+..++-..
T Consensus 343 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 384 (537)
T 3fp2_A 343 NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFF 384 (537)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 344444455555555555555555555555554444443333
No 110
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=91.61 E-value=0.26 Score=34.53 Aligned_cols=51 Identities=10% Similarity=0.145 Sum_probs=40.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.+.+..+|..++.+++|+++.+.-+++++.+| +..++-.-..|+..+|.
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~ 54 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGD 54 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhh
Confidence 3578899999999999999999999999999999 54444444456666654
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=91.47 E-value=1.1 Score=27.90 Aligned_cols=38 Identities=8% Similarity=-0.071 Sum_probs=35.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.+++++....|..++.+++|+++.+..+++++.+|-+.
T Consensus 68 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 68 KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 46789999999999999999999999999999998766
No 112
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=91.45 E-value=0.62 Score=31.22 Aligned_cols=50 Identities=18% Similarity=0.067 Sum_probs=27.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++++....|..++.+++|+++.+..+++++.+|-+..++-....++..+|
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 265 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGN 265 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcC
Confidence 45555556666666666666666666666666555444433333444443
No 113
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.39 E-value=0.66 Score=31.79 Aligned_cols=50 Identities=10% Similarity=-0.055 Sum_probs=25.1
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.+....|..++.+++++++.+..+++++.+|-+..++-....++...|
T Consensus 236 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 285 (388)
T 1w3b_A 236 HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKG 285 (388)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Confidence 44455555555555555555555555555555555444333333333333
No 114
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=90.67 E-value=0.72 Score=34.42 Aligned_cols=51 Identities=8% Similarity=-0.072 Sum_probs=30.8
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.++....|..++.+++|++|.+..++.++.||-+...+-.--.++.+++
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 88 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG 88 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 456666667777777777777777777777777665554433333333443
No 115
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.35 E-value=0.74 Score=34.07 Aligned_cols=51 Identities=8% Similarity=-0.114 Sum_probs=29.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.+.....|..++.+++|+++.+..++.++.+|-+...+-..-.++.++|
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 71 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQ 71 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCC
Confidence 455666666666666666666666666666666665544433333334433
No 116
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=90.05 E-value=0.85 Score=29.25 Aligned_cols=35 Identities=9% Similarity=-0.033 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 20 MVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 20 l~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
....|..++..++|+++.+..+++++.+|.+..++
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 111 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMY 111 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHH
Confidence 44555555555555555555555555555544433
No 117
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=89.62 E-value=0.93 Score=33.37 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=33.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+|......+|..++..++|++|.+..+++++.+|-+..+.-..-.++..++
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~ 399 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAK 399 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 3567777778888888888888888888888888877766554444444443
No 118
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=89.54 E-value=0.92 Score=33.58 Aligned_cols=51 Identities=8% Similarity=-0.009 Sum_probs=28.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++.+.....|..++.+++|+++.+..++.++.+|-+...+-..-.++.++|
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 105 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAG 105 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Confidence 455666666666666666666666666666666655444433333333333
No 119
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=89.21 E-value=1.2 Score=28.98 Aligned_cols=37 Identities=14% Similarity=0.032 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.++....|..++.+++|+++.+..+++++.+|-+...
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 88 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRV 88 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchh
Confidence 8899999999999999999999999999999977543
No 120
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=89.20 E-value=1.1 Score=32.74 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=19.4
Q ss_pred CChHHHHHHHHHHHHhCC-HHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCA-YKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~-f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+|.++...++..+...++ ++++++..+++|+.||-+..+.
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~ 169 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVW 169 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHH
Confidence 344444455555555553 5555555555555555444433
No 121
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=89.04 E-value=0.56 Score=33.93 Aligned_cols=52 Identities=12% Similarity=0.078 Sum_probs=44.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+|.+....+|..++..++|++|.+.-+++++.+|-+..+.-..-.++..++
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999998776665555555544
No 122
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=88.89 E-value=0.55 Score=34.41 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=19.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
|.++...++..+...++|+++.+..+++|+.||-|..+.
T Consensus 165 ~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 165 NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 444444455555555555555555555555555444433
No 123
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=88.83 E-value=0.56 Score=33.14 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+....|..++.+++|++|.+.++++|+.||.+..++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 267 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKAL 267 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 555666666666677777776677766666655444
No 124
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=88.52 E-value=0.99 Score=33.25 Aligned_cols=50 Identities=18% Similarity=0.087 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
..+...+|..++..++|++|.+.++++|+.||-+...+-.-=.++.+++.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~ 366 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE 366 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccC
Confidence 57888999999999999999999999999999887665444455555553
No 125
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=88.46 E-value=0.75 Score=33.90 Aligned_cols=52 Identities=17% Similarity=0.125 Sum_probs=44.1
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
+++++....|..++.+++|+++.+..++.++.||-+..+.-..-.++..++.
T Consensus 256 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~ 307 (474)
T 4abn_A 256 SNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSR 307 (474)
T ss_dssp GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999987766555555555553
No 126
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.98 E-value=1.7 Score=33.74 Aligned_cols=40 Identities=8% Similarity=0.047 Sum_probs=21.2
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.++.++...+|..++.+++|+++.+..+++++.+|-+...
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a 469 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRL 469 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHH
Confidence 3445555555555555555555555555555555554433
No 127
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=87.94 E-value=0.89 Score=33.47 Aligned_cols=51 Identities=14% Similarity=0.040 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcc
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSN 68 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n 68 (79)
+++...|+.+...+++.++...+++++..||++....-..+-+|+..|...
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~ 222 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQS 222 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 456678888999999999999999999999999999888888888887643
No 128
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=87.70 E-value=1.1 Score=28.94 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=39.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC---CchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT---ACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~---~~LP~hiacL~EL~~ 66 (79)
.+++.+..+|..++.+++|+++.+.-+++++.+|.+. ..+-.---|++.+|.
T Consensus 2 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~ 56 (225)
T 2yhc_A 2 NPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNAD 56 (225)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCC
Confidence 4678899999999999999999999999999999765 333333334444443
No 129
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=87.23 E-value=1.5 Score=35.16 Aligned_cols=52 Identities=12% Similarity=-0.039 Sum_probs=36.5
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~ 66 (79)
++.+.....|..+..+++++++.+.-++.|+.||-+...+--...++.+++.
T Consensus 109 ~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 109 AFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 5667777777777777777777777777777777776666555555555554
No 130
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.07 E-value=0.98 Score=35.07 Aligned_cols=56 Identities=13% Similarity=-0.072 Sum_probs=47.6
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcch
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSNS 69 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n~ 69 (79)
.+|.++...++..++.+++|+++.+.-+++++.||-+...+-..-.++.++|...+
T Consensus 464 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 464 GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 46889999999999999999999999999999999998877666666777765433
No 131
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=86.90 E-value=0.67 Score=37.15 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=22.6
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
+|.|.+...|..+..+++|+++.+.-++.|+.||-+..++
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~ 46 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAH 46 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3455555555556666666666666666666655554443
No 132
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=86.89 E-value=0.72 Score=26.47 Aligned_cols=38 Identities=8% Similarity=-0.104 Sum_probs=33.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.+++++....|..++..++++++.+.-++.++.+|-+.
T Consensus 38 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 38 PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 46788999999999999999999999999998876543
No 133
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=86.45 E-value=1.4 Score=28.85 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHI 58 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hi 58 (79)
+-|-+...|=-+|..++|.+|..-+..+|+.+|-|....-+.-
T Consensus 73 ~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 73 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 5578888999999999999999999999999999988776654
No 134
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=86.30 E-value=1.6 Score=32.11 Aligned_cols=52 Identities=15% Similarity=-0.006 Sum_probs=44.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC--CCCCchHHHHHHHHhhCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDP--YHTACLPLHIACLVEMNK 66 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp--yn~~~LP~hiacL~EL~~ 66 (79)
.+...+.-.|..++..+++++|++++.+.++.+| .+.++.-+-+-++..++.
T Consensus 98 ~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r 151 (310)
T 3mv2_B 98 NSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNN 151 (310)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCC
Confidence 5567778899999999999999999999999998 777777777777777664
No 135
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=86.17 E-value=0.95 Score=33.34 Aligned_cols=39 Identities=8% Similarity=0.116 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHHHHhCCH-HHHHHHHHHHHhcCCCCCCc
Q psy3703 15 DNLDMMVANAERLYYGCAY-KKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f-~~c~~it~~iL~~Dpyn~~~ 53 (79)
++.++...+|..++.+++| ++|.+..+++++.||.+..+
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a 139 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEA 139 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHH
Confidence 3445555555555555555 55555555555555544433
No 136
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=85.50 E-value=2.4 Score=31.54 Aligned_cols=47 Identities=11% Similarity=0.038 Sum_probs=40.8
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIAC 60 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiac 60 (79)
.++++.....|..++.+++|+++.+..+++++.+|-+..+.-..-.+
T Consensus 71 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 71 KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 46788999999999999999999999999999999988866554444
No 137
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=85.16 E-value=2.5 Score=30.45 Aligned_cols=51 Identities=6% Similarity=-0.117 Sum_probs=26.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
+++++....+..++..++++++.++-+++++.+|-+....-..+.++...|
T Consensus 371 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 421 (597)
T 2xpi_A 371 EKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEG 421 (597)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 345555555555555555555555555555555554444444444444433
No 138
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=85.03 E-value=0.97 Score=30.34 Aligned_cols=43 Identities=19% Similarity=0.228 Sum_probs=37.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHH
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLH 57 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~h 57 (79)
++.|-+...|--+|..++|.+|.+.++++|+.+|-|....-+.
T Consensus 69 ~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 69 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 3578888899999999999999999999999999987765543
No 139
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=85.00 E-value=1.1 Score=25.68 Aligned_cols=38 Identities=11% Similarity=-0.177 Sum_probs=33.9
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.++.++....|..+..+++++++...-+++++.+|-+.
T Consensus 50 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 50 PTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRG 87 (115)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 46788999999999999999999999999999888544
No 140
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=84.99 E-value=0.91 Score=32.02 Aligned_cols=42 Identities=7% Similarity=-0.116 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchH
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLP 55 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP 55 (79)
.+|......+|..++..++|++|.+..+++++.+|-+..+.-
T Consensus 261 p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 261 EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 478899999999999999999999999999999998876544
No 141
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=84.57 E-value=1.7 Score=27.86 Aligned_cols=37 Identities=11% Similarity=0.040 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
+.+.+...|+.++.+++|+++....+++++.+|-+..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 40 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK 40 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHH
Confidence 3566788899999999999999999999999888653
No 142
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=84.36 E-value=3.5 Score=27.90 Aligned_cols=52 Identities=13% Similarity=0.112 Sum_probs=36.5
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC-chHHHHHHHHhhC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA-CLPLHIACLVEMN 65 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~-~LP~hiacL~EL~ 65 (79)
.++.++-...|..+..+++++++.++-+++++.+|-+.. +.-.+..++...|
T Consensus 96 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 148 (308)
T 2ond_A 96 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE 148 (308)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhc
Confidence 456777778888888888888888888888888887765 4444444444443
No 143
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=84.06 E-value=1.9 Score=28.82 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
.+.+.+.+..+|..++|+++.+-.++.|+.||-++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~ 45 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMP 45 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCc
Confidence 46778899999999999999999999999999853
No 144
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=83.31 E-value=2 Score=28.63 Aligned_cols=44 Identities=7% Similarity=0.008 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHH
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIA 59 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hia 59 (79)
.-|-+.-.|--+|..++|.+|...+..+|+.+|-|..+.-+.-+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 35777888889999999999999999999999999988766543
No 145
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=82.58 E-value=2.5 Score=28.47 Aligned_cols=44 Identities=7% Similarity=0.011 Sum_probs=38.4
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHI 58 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hi 58 (79)
+.-|-+--.|--+|..++|.+|...+..+|+.+|-|....-+.-
T Consensus 75 ~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 75 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 45677888899999999999999999999999999988776653
No 146
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=82.05 E-value=4 Score=27.32 Aligned_cols=40 Identities=10% Similarity=0.054 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
.......+...|+.++.+++|+++....+++++.+|-+..
T Consensus 5 ~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 44 (406)
T 3sf4_A 5 MEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLK 44 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHH
Confidence 3566778899999999999999999999999999987654
No 147
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=81.71 E-value=1.8 Score=27.83 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=31.4
Q ss_pred CCCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 11 SVLPDNLDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 11 ~~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
..-.++.+++...|..++.+++|+++.++.+++++.
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 56 (311)
T 3nf1_A 21 YEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALED 56 (311)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344566788999999999999999999999999984
No 148
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=79.99 E-value=3.3 Score=28.37 Aligned_cols=37 Identities=14% Similarity=0.040 Sum_probs=31.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
++|+++....+..+..+++++++.+.-+++++.+|-+
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~ 163 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDA 163 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc
Confidence 5788888888888888888888888888888888764
No 149
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.06 E-value=3.3 Score=28.55 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
.|.-.+.+|+.++.+++|+++.++-.++++.+|-...
T Consensus 3 ~p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~ 39 (434)
T 4b4t_Q 3 LPGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSS 39 (434)
T ss_dssp STTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSS
T ss_pred ChHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccch
Confidence 3566788999999999999999999999999987554
No 150
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=78.69 E-value=4.6 Score=26.98 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCChHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcchhhhhhhc
Q psy3703 14 PDNLDMMVANAERLYYGC-----------AYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSNSKLKKKKK 76 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~-----------~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n~LFl~AHk 76 (79)
.++.|.....+-.++..+ +|+++.+-.++.++.||-+ +.|--.+--..+..+|++--|+
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~----~~y~~al~~~~ka~el~~~~~~ 146 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN----THYLKSLEMTAKAPQLHAEAYK 146 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC----HHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHhCHhccCcccc
Confidence 357888888888888875 8999999999999999986 5666666666667777765554
No 151
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=76.92 E-value=6.8 Score=26.61 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
...+...|+.++.+++|+++.+..+++++.+|-+..
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~ 83 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLR 83 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChh
Confidence 455678899999999999999999999999998754
No 152
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=76.59 E-value=4 Score=27.27 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc-------CCCCCCch----HHHHHHHHhhCC
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSR-------DPYHTACL----PLHIACLVEMNK 66 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~-------Dpyn~~~L----P~hiacL~EL~~ 66 (79)
+...++..+...++|++|++-+++.|+. ||-+...+ =--=.+|..|+.
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr 117 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGR 117 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCC
Confidence 8889999999999999999999999999 99654444 222344555543
No 153
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=75.66 E-value=3.8 Score=28.55 Aligned_cols=40 Identities=15% Similarity=0.117 Sum_probs=36.0
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.+++++....|..++..++++++.+..+++++.+|-+..+
T Consensus 244 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 283 (472)
T 4g1t_A 244 PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYL 283 (472)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHH
Confidence 5788999999999999999999999999999999976544
No 154
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=75.10 E-value=3 Score=26.24 Aligned_cols=31 Identities=6% Similarity=-0.229 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
..++....|..++.+++|+++.+..++.++.
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999987
No 155
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.85 E-value=15 Score=24.64 Aligned_cols=37 Identities=8% Similarity=0.025 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.++....+..+..+++|+++.+..+++++.+|.+...
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 4567788999999999999999999999999987653
No 156
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=74.74 E-value=4.4 Score=32.20 Aligned_cols=54 Identities=13% Similarity=0.230 Sum_probs=44.2
Q ss_pred CCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 12 VLPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 12 ~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
.+-...|=++.+|+..|..++|+-+.+++..++.-||-|.+.--+-..++-.|+
T Consensus 444 ~~~gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 444 EYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLG 497 (658)
T ss_dssp HHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 345678889999999999999999999999999999999876655544444443
No 157
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=69.64 E-value=4.5 Score=25.96 Aligned_cols=34 Identities=6% Similarity=-0.020 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDP 48 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp 48 (79)
++.++....|+.++.+++++++.+.-++.++.+|
T Consensus 276 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~ 309 (311)
T 3nf1_A 276 TVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRK 309 (311)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhh
Confidence 3456778899999999999999999999998765
No 158
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=68.66 E-value=4.7 Score=25.27 Aligned_cols=31 Identities=13% Similarity=-0.023 Sum_probs=27.4
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
+.++....|..++.+++|+++.+..+++++.
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999887
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=66.18 E-value=22 Score=22.88 Aligned_cols=47 Identities=2% Similarity=-0.076 Sum_probs=34.4
Q ss_pred CChHHHHHHHHHHHH----hCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 15 DNLDMMVANAERLYY----GCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~----~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
++++.....+..++. ..+++++.+.-++.++.+| .-.-..++.+++-
T Consensus 180 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~---~~a~~~l~~~~~~ 230 (273)
T 1ouv_A 180 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN---GGGCFNLGAMQYN 230 (273)
T ss_dssp TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC---HHHHHHHHHHHHc
Confidence 467777788888888 8888888888888888766 3344566666664
No 160
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=65.55 E-value=13 Score=23.92 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=20.9
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
+|++.....+..++.+++++++.+.-++.++
T Consensus 4 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~ 34 (273)
T 1ouv_A 4 QDPKELVGLGAKSYKEKDFTQAKKYFEKACD 34 (273)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4566666677777777777777777766666
No 161
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=64.35 E-value=6.7 Score=26.86 Aligned_cols=27 Identities=19% Similarity=0.368 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
+++..|+.+|.++.|.++...-+++|.
T Consensus 65 ~l~~ladalf~~~eyrrA~~~y~qALq 91 (167)
T 3ffl_A 65 LLVYHADSLFHDKEYRNAVSKYTMALQ 91 (167)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 899999999999999999888877653
No 162
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=64.00 E-value=18 Score=24.29 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=20.9
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
+++++....|+.+..+++++++.++-++.++.
T Consensus 201 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 201 DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 45666666666666666666666666666664
No 163
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=63.67 E-value=18 Score=26.23 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=18.3
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDP 48 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp 48 (79)
.++.++-...|+.+..+++++++.++-++.++..|
T Consensus 43 P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p 77 (530)
T 2ooe_A 43 PSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVL 77 (530)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCC
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Confidence 34445555555555555555555555555555555
No 164
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=62.89 E-value=8 Score=21.79 Aligned_cols=31 Identities=13% Similarity=0.051 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDP 48 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp 48 (79)
.+....|..++.+++|+++.+..++.++..|
T Consensus 10 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 40 (164)
T 3ro3_A 10 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 40 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3455666677777777777777766666543
No 165
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=61.36 E-value=21 Score=20.55 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC-------CCCCchHHHHHHHHhhCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDP-------YHTACLPLHIACLVEMNK 66 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp-------yn~~~LP~hiacL~EL~~ 66 (79)
+++--...+..+|.+++|++|...-+..++..+ -...++-..--|++++|.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~ 61 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGD 61 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccC
Confidence 455667889999999999999998888887531 122233333356777774
No 166
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=59.04 E-value=21 Score=23.64 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
.+...++.++.+++|+++.++.+++++..+.+..
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~ 110 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPE 110 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccCChH
Confidence 4455689999999999999999999998877655
No 167
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=58.27 E-value=12 Score=25.71 Aligned_cols=26 Identities=4% Similarity=-0.078 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 20 MVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 20 l~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
....|..++.+++|+++.+.-++.++
T Consensus 225 ~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 225 LLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34445555555555555555555555
No 168
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=57.77 E-value=9.5 Score=26.49 Aligned_cols=39 Identities=10% Similarity=-0.002 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
.++.+.....|..+..+++|+++.+.-+++|+.+|-+..
T Consensus 331 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 331 DNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp TTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred CchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 355667788999999999999999999999999886544
No 169
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=56.86 E-value=33 Score=22.68 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
.+...++.++.+++|+++++..++.++..|..
T Consensus 77 ~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~ 108 (293)
T 2qfc_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH 108 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhccccCC
Confidence 44678889999999999999999999988864
No 170
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=56.31 E-value=28 Score=25.22 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
..++.++-...|..+..+++++++.++-+++++.+|-++
T Consensus 317 ~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 355 (530)
T 2ooe_A 317 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP 355 (530)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCc
Confidence 457889999999999999999999999999999988764
No 171
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=56.23 E-value=11 Score=22.60 Aligned_cols=31 Identities=0% Similarity=-0.151 Sum_probs=21.3
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
...++....|..++.+++|+++.+..++.++
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 54 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQ 54 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 3456666777777777777777777776666
No 172
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=59.81 E-value=2.6 Score=33.95 Aligned_cols=54 Identities=9% Similarity=0.143 Sum_probs=43.7
Q ss_pred CCCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 11 SVLPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 11 ~~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
-.+-...|=++.+|+..|.+++|+-|.+++..++.-||-|.+.--+-..++-.|
T Consensus 455 v~~~Gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l 508 (668)
T 2yhe_A 455 VEAMGGADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQL 508 (668)
Confidence 456677899999999999999999999999999999999877654444444333
No 173
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=52.52 E-value=9.4 Score=25.41 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHHHHhCCH----------HHHHHHHHHHHhcCCCCCCch
Q psy3703 14 PDNLDMMVANAERLYYGCAY----------KKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f----------~~c~~it~~iL~~Dpyn~~~L 54 (79)
.++.|.....+..+...++| +++.+..++.|+.||-+...+
T Consensus 33 P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~ 83 (158)
T 1zu2_A 33 PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAV 83 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHH
Confidence 46788888888888888776 499999999999999876554
No 174
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=51.71 E-value=29 Score=19.28 Aligned_cols=31 Identities=10% Similarity=-0.015 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRD 47 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~D 47 (79)
..+....|..++.+++|+++.+..++.++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999888653
No 175
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=50.75 E-value=23 Score=25.44 Aligned_cols=34 Identities=9% Similarity=-0.103 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 16 NLDMMVANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
.+|.+..++-.+..+|+.+++-++-+++++.||-
T Consensus 207 ~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 207 ARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 5689999999999999999999999999999995
No 176
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=49.08 E-value=18 Score=21.71 Aligned_cols=30 Identities=0% Similarity=-0.261 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
..+....|..++.+++|+++.+..++.++.
T Consensus 66 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 66 HRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456778899999999999999999998887
No 177
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=48.39 E-value=33 Score=23.36 Aligned_cols=48 Identities=15% Similarity=0.093 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
.++....|..++..++++++.+..++.++..+-+..--|-...|+..+
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~l 190 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLF 190 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 467788889999999999999998888887665544333334444333
No 178
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=47.79 E-value=32 Score=23.44 Aligned_cols=27 Identities=4% Similarity=0.026 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
+....|..++.+++|+++.+..++.++
T Consensus 226 ~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 226 TLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 455556666666666666666666666
No 179
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=47.35 E-value=29 Score=21.10 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 21 VANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 21 ~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
+..+-.+|+.++|-+|.++-+.+-...|.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~ 33 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATG 33 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCC
Confidence 45788999999999999999999988754
No 180
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=45.39 E-value=19 Score=26.71 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=35.8
Q ss_pred CCChHHHHHHHHHHHHh-CCHHHHHHHHHHHHhcCCCCCCchH
Q psy3703 14 PDNLDMMVANAERLYYG-CAYKKCFTITEQVLSRDPYHTACLP 55 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~-~~f~~c~~it~~iL~~Dpyn~~~LP 55 (79)
++|+|+.+.-|+.+..+ +|++++-+..+++|..||...+-.+
T Consensus 236 ~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~ 278 (301)
T 3u64_A 236 AHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNK 278 (301)
T ss_dssp TTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCH
T ss_pred CCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChh
Confidence 34699999999999885 9999999999999999998633334
No 181
>3cqc_A Nuclear pore complex protein NUP107; nucleoporin, mRNA transport, nucleus, phosphoprotein, protein transport, translocation, polymorphism; 2.53A {Homo sapiens} PDB: 3i4r_A 3cqg_A
Probab=45.17 E-value=23 Score=25.32 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
|++++..-..++..+++++|++++..|=+
T Consensus 200 Pelvl~Lh~vl~~a~~~~~~~~LA~~VA~ 228 (270)
T 3cqc_A 200 PMLCFLLHTILHSTGQYQECLQLADMVSS 228 (270)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 57888888999999999999999988754
No 182
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=44.95 E-value=30 Score=25.67 Aligned_cols=41 Identities=5% Similarity=-0.100 Sum_probs=30.4
Q ss_pred CChHH---HHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCCCCchH
Q psy3703 15 DNLDM---MVANAERLYYGCAYKKCFTITEQVLSR-----DPYHTACLP 55 (79)
Q Consensus 15 ~N~Dv---l~~~Ae~ly~~~~f~~c~~it~~iL~~-----Dpyn~~~LP 55 (79)
+++++ +...|..+..+++|+++..+.+++|+. -|.|+.+.-
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~ 372 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGV 372 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHH
Confidence 45554 456778899999999999999999864 456655443
No 183
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=44.94 E-value=39 Score=23.09 Aligned_cols=47 Identities=17% Similarity=-0.006 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVE 63 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~E 63 (79)
.++....|..++..++++++.+..++.++..+-+...-+-...|+..
T Consensus 141 a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 187 (378)
T 3q15_A 141 AEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFV 187 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 45677888899999999999999999888766544433333333333
No 184
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=44.91 E-value=17 Score=24.61 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
.+....|..++.+++|+++.+..++.++.
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 115 (411)
T 4a1s_A 87 AIYSQLGNAYFYLGDYNKAMQYHKHDLTL 115 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 46777888888888888888888887765
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=44.60 E-value=31 Score=25.84 Aligned_cols=48 Identities=10% Similarity=0.192 Sum_probs=34.4
Q ss_pred CChHHH---HHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCCCCchHHH--HHHHH
Q psy3703 15 DNLDMM---VANAERLYYGCAYKKCFTITEQVLSR-----DPYHTACLPLH--IACLV 62 (79)
Q Consensus 15 ~N~Dvl---~~~Ae~ly~~~~f~~c~~it~~iL~~-----Dpyn~~~LP~h--iacL~ 62 (79)
+++|++ ...|..+..+|+|++|..+.++.|+. -|.|+.+.-.+ +|-++
T Consensus 335 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 392 (433)
T 3qww_A 335 SNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY 392 (433)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 456665 46789999999999999999998853 56666655433 44444
No 186
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=44.51 E-value=41 Score=21.20 Aligned_cols=29 Identities=7% Similarity=-0.083 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRD 47 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~D 47 (79)
+....|+.+..+++++++.+..++.++..
T Consensus 305 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 305 ACWSLGNAYTALGNHDQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 44445555555555555555555555443
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=43.80 E-value=44 Score=22.40 Aligned_cols=33 Identities=9% Similarity=-0.000 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
.+...+|..++.+++++++.+..++.|+..|-.
T Consensus 15 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~ 47 (373)
T 1hz4_A 15 EFNALRAQVAINDGNPDEAERLAKLALEELPPG 47 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence 456678888899999999999999999887743
No 188
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=43.11 E-value=33 Score=22.63 Aligned_cols=29 Identities=28% Similarity=0.126 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
.++....+..++.+++|+++.+.-+++|+
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 183 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34678888899999999999999888885
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=42.96 E-value=52 Score=20.84 Aligned_cols=47 Identities=11% Similarity=-0.045 Sum_probs=34.8
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhh
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEM 64 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL 64 (79)
+|++.+...+..++.+++++++.+.-++..+.+ ..---..++.++.-
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~ 62 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR 62 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc
Confidence 688899999999999999999999999888764 22223445555543
No 190
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=42.23 E-value=50 Score=25.51 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=35.0
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
|..++|-+...++.+-.+|+|+++..+-++.|..|+-|..
T Consensus 203 L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~ 242 (449)
T 1b89_A 203 IVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMG 242 (449)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHH
T ss_pred HHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHH
Confidence 5678888888888888899999999999999999998843
No 191
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=42.05 E-value=44 Score=22.09 Aligned_cols=33 Identities=12% Similarity=0.020 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYH 50 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn 50 (79)
.+....|..++.+++|+++.+..++.++..|-.
T Consensus 188 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 220 (406)
T 3sf4_A 188 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF 220 (406)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc
Confidence 355666777777777777777777777655443
No 192
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=41.96 E-value=25 Score=25.59 Aligned_cols=52 Identities=13% Similarity=0.006 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhc----------CCCCCCchHHHHHHHHhhCC-cchhh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSR----------DPYHTACLPLHIACLVEMNK-SNSKL 71 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~----------Dpyn~~~LP~hiacL~EL~~-~n~LF 71 (79)
+.++++ .+-.+++|.++-++.+.+++. ||.|..+|---|.|-+.+|+ .++++
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk~a~~l~ 276 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGLDTEDLT 276 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhChHHHHHH
Confidence 556666 688899999999999999887 69999999888888888886 44444
No 193
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=41.36 E-value=23 Score=23.81 Aligned_cols=33 Identities=6% Similarity=-0.043 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
.+++...|..+..+++|+++.+..+++++..|-
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 456667788888888888888888888876553
No 194
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=38.74 E-value=46 Score=23.68 Aligned_cols=39 Identities=5% Similarity=-0.076 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHHHHhC--CHHHHHHHHHHHHhcCCCCCCc
Q psy3703 15 DNLDMMVANAERLYYGC--AYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~--~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
++..+-..|.+.+...+ ++++.++.|+.+|..+|=+..+
T Consensus 65 ~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a 105 (306)
T 3dra_A 65 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI 105 (306)
T ss_dssp TCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH
T ss_pred HHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH
Confidence 34445556667777767 7888888888888887765544
No 195
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=38.58 E-value=51 Score=21.05 Aligned_cols=28 Identities=18% Similarity=0.402 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
-.+++.|..+|.-++|.+++.+-++|+.
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALN 81 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHc
Confidence 3568899999999999999999999974
No 196
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=38.05 E-value=53 Score=21.61 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDP 48 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dp 48 (79)
.+....|..++.+++|++|.+..++.++..+
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5888999999999999999999999887543
No 197
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=36.88 E-value=58 Score=23.13 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHh-cCCCCC
Q psy3703 15 DNLDMMVANAERLYYGCAYKKCFTITEQVLS-RDPYHT 51 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~-~Dpyn~ 51 (79)
.++-.+-..|+.+-..++++++.++++.+.+ .||.+.
T Consensus 256 ~s~~al~~la~~~~~~~~~~~A~~~~~~l~~~~Dpir~ 293 (306)
T 3dra_A 256 TSSFALETLAKIYTQQKKYNESRTVYDLLKSKYNPIRS 293 (306)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHHHHHhccChHHH
Confidence 4677888899998899999999999999997 699753
No 198
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=36.64 E-value=47 Score=25.22 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=31.2
Q ss_pred CChHH---HHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCCCCchHH
Q psy3703 15 DNLDM---MVANAERLYYGCAYKKCFTITEQVLSR-----DPYHTACLPL 56 (79)
Q Consensus 15 ~N~Dv---l~~~Ae~ly~~~~f~~c~~it~~iL~~-----Dpyn~~~LP~ 56 (79)
+++|+ +...|..+..+|+|+++..+.++.|+. -|.|+.+.-.
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 395 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMA 395 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 45555 456788999999999999999988864 5666665443
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=35.95 E-value=33 Score=26.07 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCCCCchHH
Q psy3703 21 VANAERLYYGCAYKKCFTITEQVLSR-----DPYHTACLPL 56 (79)
Q Consensus 21 ~~~Ae~ly~~~~f~~c~~it~~iL~~-----Dpyn~~~LP~ 56 (79)
+..|+.+..||+|+++..+.++.|+. .|.|+.++-+
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~ 353 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRL 353 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 45678889999999999999998864 4556555443
No 200
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=35.39 E-value=40 Score=25.84 Aligned_cols=41 Identities=10% Similarity=0.062 Sum_probs=28.3
Q ss_pred CChHHHHHHHHHHHHhC--CHHHHHHHHHHHHhcCCCCCCchH
Q psy3703 15 DNLDMMVANAERLYYGC--AYKKCFTITEQVLSRDPYHTACLP 55 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~--~f~~c~~it~~iL~~Dpyn~~~LP 55 (79)
+|..+-.-|+-.+..-+ +|+++++.+.++|+.||-|..+.-
T Consensus 105 K~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~ 147 (567)
T 1dce_A 105 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWD 147 (567)
T ss_dssp TCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHH
Confidence 34444455555555556 778899999999999988766553
No 201
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=33.23 E-value=55 Score=21.31 Aligned_cols=47 Identities=9% Similarity=0.090 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcchh
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSNSK 70 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n~L 70 (79)
|..-|+-.+-++|+|++++.+-+ .-+ -++..|.--=|-.-+|...+|
T Consensus 42 v~lIR~sSLmNrG~Yq~Al~l~~----~~c-~pdlepw~ALce~rlGl~s~l 88 (116)
T 2p58_C 42 VQLIRLSSLMNRGDYASALQQGN----KLA-YPDLEPWLALCEYRLGLGSAL 88 (116)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHT----TSC-CGGGHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcchhHHHHHHhcC----CCC-CchHHHHHHHHHHhcccHHHH
Confidence 45667888999999999987543 334 678888777676666655443
No 202
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=32.44 E-value=45 Score=22.15 Aligned_cols=35 Identities=9% Similarity=-0.006 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
.....+..+..+++++++....++.++.||-+...
T Consensus 201 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 201 YFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 56778888999999999999999999999976653
No 203
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=32.33 E-value=87 Score=20.89 Aligned_cols=35 Identities=9% Similarity=0.006 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCc
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTAC 53 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~ 53 (79)
+.....+..++.+++++++....++.+ .+|-+...
T Consensus 196 ~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~ 230 (307)
T 2ifu_A 196 KKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGS 230 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCC
Confidence 366777788888999999999999999 99976554
No 204
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=31.78 E-value=1.6e+02 Score=23.46 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=42.0
Q ss_pred CCCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH----H---------h---cCCCCCCchHHHHHHHHhhCCcch
Q psy3703 11 SVLPDNLDMMVANAERLYYGCAYKKCFTITEQV----L---------S---RDPYHTACLPLHIACLVEMNKSNS 69 (79)
Q Consensus 11 ~~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~i----L---------~---~Dpyn~~~LP~hiacL~EL~~~n~ 69 (79)
++|.+--|+...+=+.+|.+++|++|-+++-.- | + .-|-...-|-.|..+|.|-+.-|+
T Consensus 355 ~~LpGAd~L~~~~F~~l~~~g~y~~AA~~aA~sP~giLRt~~Ti~rFk~vp~~pgq~splL~YF~~Ll~~g~Ln~ 429 (494)
T 1bpo_A 355 NNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNK 429 (494)
T ss_dssp TTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSGGGSSCSHHHHHHHTTSCCCTTSCCHHHHHHHHHHHHSCCCH
T ss_pred cCCccHHHHHHHHHHHHHHcCCHHHHHHHHHhCccccccCHHHHHHHhcCCCCCCCCCHHHHHHHHHhccCccch
Confidence 444444455555559999999999998876532 1 2 344566778999999999987665
No 205
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=30.95 E-value=65 Score=21.58 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
+=.+..+-.+|+.++|-+|.++-+.+-...+-
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~ 64 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGR 64 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCS
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCC
Confidence 34567888999999999999999999987653
No 206
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=30.65 E-value=1.1e+02 Score=22.44 Aligned_cols=36 Identities=3% Similarity=-0.093 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHhC-CHHHHHHHHHHHHhcCCCCC
Q psy3703 16 NLDMMVANAERLYYGC-AYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~~~-~f~~c~~it~~iL~~Dpyn~ 51 (79)
|..+-..|...+...+ ++++.++.|+.+|+.+|=+.
T Consensus 87 ~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny 123 (349)
T 3q7a_A 87 HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSY 123 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcH
Confidence 3444445555555555 36666666666666666543
No 207
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=30.54 E-value=66 Score=23.36 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=26.7
Q ss_pred CChHHHHHHHHHHHHhC--CHHHHHHHHHHHHhcCCCCCCch
Q psy3703 15 DNLDMMVANAERLYYGC--AYKKCFTITEQVLSRDPYHTACL 54 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~--~f~~c~~it~~iL~~Dpyn~~~L 54 (79)
.|..+-.-|.-.+..-+ +|++.++.+.++|+.||-|..+-
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW 147 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCW 147 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHH
Confidence 34455555555555545 48888888888888888776653
No 208
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=29.47 E-value=65 Score=23.80 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCCCCchHH
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSR-----DPYHTACLPL 56 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~-----Dpyn~~~LP~ 56 (79)
-+....+.++.+++|+++.+++++.|+. .|.|+.++-+
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~ 331 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKV 331 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHH
Confidence 3456688999999999999999999975 4555554433
No 209
>1mm0_A Termicin; termite, cytein-rich, antimicrobial peptide, insect defensin, CSAB motif, antimicrobial protein; NMR {Pseudacanthotermes spiniger} SCOP: g.3.7.4
Probab=29.11 E-value=36 Score=17.97 Aligned_cols=13 Identities=15% Similarity=0.884 Sum_probs=11.1
Q ss_pred hCCHHHHHHHHHH
Q psy3703 30 GCAYKKCFTITEQ 42 (79)
Q Consensus 30 ~~~f~~c~~it~~ 42 (79)
.|+|++|...|++
T Consensus 1 aC~~~sCWa~Cqa 13 (36)
T 1mm0_A 1 ACNFQSCWATCQA 13 (36)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHH
Confidence 3899999999875
No 210
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=28.79 E-value=94 Score=20.75 Aligned_cols=32 Identities=6% Similarity=-0.085 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Q psy3703 18 DMMVANAERLYYGCAYKKCFTITEQVLSRDPY 49 (79)
Q Consensus 18 Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpy 49 (79)
.+....|..++.+++++++.+..++.++..|-
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 34556888899999999999999999887764
No 211
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=26.78 E-value=1.2e+02 Score=24.85 Aligned_cols=55 Identities=7% Similarity=0.074 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCC-cchhh
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNK-SNSKL 71 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~-~n~LF 71 (79)
.|++..+|+-|-.++||+-|++++++....-|--|.+==.-.-|-+.|+. .|.|.
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALL 392 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALF 392 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHH
Confidence 46899999999999999999999999999999988876666667777775 55554
No 212
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=26.33 E-value=1.2e+02 Score=22.74 Aligned_cols=52 Identities=6% Similarity=-0.079 Sum_probs=36.9
Q ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCc
Q psy3703 14 PDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKS 67 (79)
Q Consensus 14 ~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~ 67 (79)
..++-+..+.|-.++.+++++++....++.++.+|.. .--+-++-++++.+.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~--~a~~llG~~~~~~G~ 325 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSW--LNYVLLGKVYEMKGM 325 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHCCC
Confidence 4556666677777888999999999999999998631 111455666666543
No 213
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=26.24 E-value=37 Score=24.32 Aligned_cols=39 Identities=13% Similarity=0.051 Sum_probs=31.9
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHT 51 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~ 51 (79)
+.+-.|+.++.|-.+-..++|+++.++-+.++..+|-+.
T Consensus 98 v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~ 136 (282)
T 4f3v_A 98 VTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHL 136 (282)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH
T ss_pred cCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH
Confidence 445578889999999999999999999988888887443
No 214
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=26.17 E-value=37 Score=19.82 Aligned_cols=18 Identities=11% Similarity=0.244 Sum_probs=5.9
Q ss_pred HHHHHHHHHHhCCHHHHH
Q psy3703 20 MVANAERLYYGCAYKKCF 37 (79)
Q Consensus 20 l~~~Ae~ly~~~~f~~c~ 37 (79)
..-|+-.+-++|+|++++
T Consensus 43 ~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 43 TLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHHC-------
T ss_pred HHHHHHHHHccchHhHhh
Confidence 344555566666666554
No 215
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=25.88 E-value=94 Score=23.29 Aligned_cols=27 Identities=11% Similarity=0.212 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
+-+..|+.+|.+++|++|+++.+++++
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~ 127 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLR 127 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 345778999999999999999999886
No 216
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=25.86 E-value=66 Score=29.15 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCC
Q psy3703 13 LPDNLDMMVANAERLYYGCAYKKCFTITEQVLSRDPYHTA 52 (79)
Q Consensus 13 L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~ 52 (79)
+..++|-+-..+..+-.+|.|++++++.++.|..||-|..
T Consensus 1276 Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~g 1315 (1630)
T 1xi4_A 1276 IVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMG 1315 (1630)
T ss_pred hhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhH
Confidence 4567888888899999999999999999999999987644
No 217
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.98 E-value=1.1e+02 Score=20.63 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Q psy3703 17 LDMMVANAERLYYGCAYKKCFTITEQVLSR 46 (79)
Q Consensus 17 ~Dvl~~~Ae~ly~~~~f~~c~~it~~iL~~ 46 (79)
..+....|..++.+++|+++.++-++++..
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHH
Confidence 456677888999999999999988887754
No 218
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=24.57 E-value=90 Score=19.71 Aligned_cols=25 Identities=16% Similarity=0.271 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQV 43 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~i 43 (79)
...-+||++-..++|+++.+-.++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3456899999999999987655443
No 219
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=24.39 E-value=52 Score=21.41 Aligned_cols=47 Identities=13% Similarity=0.198 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhCCcchh
Q psy3703 19 MMVANAERLYYGCAYKKCFTITEQVLSRDPYHTACLPLHIACLVEMNKSNSK 70 (79)
Q Consensus 19 vl~~~Ae~ly~~~~f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~~~n~L 70 (79)
|..-|+-.+-++|+|++++.+- +.-+ -++..|.--=|-.-+|...+|
T Consensus 41 v~lIR~sSLmNrG~Yq~Al~l~----~~~c-~pdlepw~ALce~rlGl~s~l 87 (115)
T 2uwj_G 41 ARLIRISSLANQGRYQEALAFA----HGNP-WPALEPWFALCEWHLGLGAAL 87 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHGGG----TTCC-CGGGHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHcchhHHHHHHhc----CCCC-CchHHHHHHHHHHhcccHHHH
Confidence 4566778889999999988643 3333 677888776676666655443
No 220
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=23.03 E-value=1e+02 Score=23.46 Aligned_cols=51 Identities=16% Similarity=0.013 Sum_probs=36.1
Q ss_pred CChHHHHHHHHHHHHhCC----------HHHHHHHHHHHHhcCCCCCCchHHHHHHHHhhC
Q psy3703 15 DNLDMMVANAERLYYGCA----------YKKCFTITEQVLSRDPYHTACLPLHIACLVEMN 65 (79)
Q Consensus 15 ~N~Dvl~~~Ae~ly~~~~----------f~~c~~it~~iL~~Dpyn~~~LP~hiacL~EL~ 65 (79)
++..+-..|++.+...++ +++.++.+.++|+.||=+..+---=--++.+++
T Consensus 61 ~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~ 121 (567)
T 1dce_A 61 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLP 121 (567)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCS
T ss_pred hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcc
Confidence 455566667788887777 999999999999999976554433333444443
No 221
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=22.20 E-value=94 Score=23.13 Aligned_cols=31 Identities=3% Similarity=-0.174 Sum_probs=24.9
Q ss_pred CChHHHH---HHHHHHHHhCCHHHHHHHHHHHHh
Q psy3703 15 DNLDMMV---ANAERLYYGCAYKKCFTITEQVLS 45 (79)
Q Consensus 15 ~N~Dvl~---~~Ae~ly~~~~f~~c~~it~~iL~ 45 (79)
+.+|+.. ..|..++.||+|+++..+-++.|+
T Consensus 377 ~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 377 YSLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 5667654 578999999999999888887775
No 222
>1u84_A Hypothetical protein; structural genomics, protein structure initiative, MCSG, PSI center for structural genomics; 1.60A {Geobacillus stearothermophilus} SCOP: a.230.1.1 PDB: 3r2x_C*
Probab=22.04 E-value=53 Score=20.29 Aligned_cols=31 Identities=13% Similarity=0.428 Sum_probs=19.5
Q ss_pred ChHHHHHHHHHHHH-----hCCHHHHHHHHHHHHhc
Q psy3703 16 NLDMMVANAERLYY-----GCAYKKCFTITEQVLSR 46 (79)
Q Consensus 16 N~Dvl~~~Ae~ly~-----~~~f~~c~~it~~iL~~ 46 (79)
++.-|......=|. .--+++|.+|+++||..
T Consensus 46 ~~~~LA~~Iq~If~~SFee~~p~e~c~~iA~kLL~i 81 (90)
T 1u84_A 46 DARTLAARIQSIYEFAFDEPIPFPHCLKLARRLLEL 81 (90)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHhh
Confidence 44444444443332 23678999999999963
No 223
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=21.00 E-value=2.2e+02 Score=25.94 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=47.7
Q ss_pred CCCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH----Hh------------cCCCCCCchHHHHHHHHhhCCcch
Q psy3703 11 SVLPDNLDMMVANAERLYYGCAYKKCFTITEQV----LS------------RDPYHTACLPLHIACLVEMNKSNS 69 (79)
Q Consensus 11 ~~L~~N~Dvl~~~Ae~ly~~~~f~~c~~it~~i----L~------------~Dpyn~~~LP~hiacL~EL~~~n~ 69 (79)
++|.+--|+...+=+.+|.+|+|+++-.++..- |. .-|-..+-|-.|.++|+|-|.-|+
T Consensus 355 ~~lpGad~l~~~~F~~l~~~g~y~~AA~~aa~sp~giLRt~~ti~rfk~~~~~pgq~~pll~YF~~ll~~g~Ln~ 429 (1630)
T 1xi4_A 355 NNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNK 429 (1630)
T ss_pred cCCCCchhHHHHHHHHHHHcCCHHHHHHHHHhCccccccCHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 788888888888889999999999998887632 32 445667889999999999887654
Done!