Query psy3706
Match_columns 443
No_of_seqs 251 out of 1636
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 23:28:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3706.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3706hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282|consensus 100.0 1.7E-89 3.8E-94 709.2 23.6 346 61-420 24-394 (454)
2 PF00450 Peptidase_S10: Serine 100.0 1E-79 2.2E-84 634.4 24.8 330 73-424 8-361 (415)
3 PLN02209 serine carboxypeptida 100.0 2E-77 4.3E-82 623.1 27.4 343 62-418 20-380 (437)
4 PTZ00472 serine carboxypeptida 100.0 2.4E-76 5.2E-81 620.6 29.9 314 73-406 44-383 (462)
5 PLN03016 sinapoylglucose-malat 100.0 3.2E-77 6.9E-82 621.3 22.4 329 65-417 21-375 (433)
6 COG2939 Carboxypeptidase C (ca 100.0 5.4E-55 1.2E-59 448.8 20.5 326 73-425 73-432 (498)
7 KOG1283|consensus 100.0 4.1E-52 8.9E-57 403.2 14.4 303 78-406 5-344 (414)
8 PLN02213 sinapoylglucose-malat 100.0 2.8E-51 6.2E-56 412.5 14.5 246 158-416 1-260 (319)
9 TIGR01250 pro_imino_pep_2 prol 97.7 0.00022 4.7E-09 67.9 10.5 130 77-255 3-133 (288)
10 TIGR03611 RutD pyrimidine util 97.7 0.00014 3E-09 68.4 8.0 116 96-255 2-117 (257)
11 PF10340 DUF2424: Protein of u 97.5 0.0002 4.4E-09 73.6 7.7 132 95-257 106-239 (374)
12 PHA02857 monoglyceride lipase; 97.2 0.0019 4.1E-08 62.7 9.5 125 91-255 9-134 (276)
13 TIGR01249 pro_imino_pep_1 prol 97.1 0.0033 7.2E-08 62.6 10.5 127 78-255 6-132 (306)
14 TIGR03056 bchO_mg_che_rel puta 97.0 0.0039 8.4E-08 59.7 9.1 109 106-256 25-133 (278)
15 PF12697 Abhydrolase_6: Alpha/ 97.0 0.0019 4.1E-08 58.6 6.5 105 112-257 1-105 (228)
16 PLN02298 hydrolase, alpha/beta 96.9 0.0065 1.4E-07 61.0 10.8 140 74-254 30-170 (330)
17 PRK10673 acyl-CoA esterase; Pr 96.9 0.0022 4.7E-08 61.1 6.7 104 104-251 11-114 (255)
18 PLN02824 hydrolase, alpha/beta 96.8 0.0044 9.6E-08 60.9 8.7 105 109-253 29-137 (294)
19 PLN02385 hydrolase; alpha/beta 96.8 0.0057 1.2E-07 62.1 9.6 127 92-254 71-198 (349)
20 COG1506 DAP2 Dipeptidyl aminop 96.8 0.0026 5.6E-08 70.2 7.3 138 92-260 375-514 (620)
21 PLN02652 hydrolase; alpha/beta 96.6 0.011 2.4E-07 61.7 10.2 127 92-254 120-246 (395)
22 TIGR02427 protocat_pcaD 3-oxoa 96.6 0.0084 1.8E-07 55.4 8.1 90 106-229 10-99 (251)
23 PRK00870 haloalkane dehalogena 96.5 0.025 5.4E-07 55.9 11.2 131 74-252 17-149 (302)
24 PLN02894 hydrolase, alpha/beta 96.3 0.016 3.5E-07 60.5 9.2 109 107-253 103-211 (402)
25 PRK11126 2-succinyl-6-hydroxy- 96.2 0.011 2.3E-07 55.9 6.8 100 109-252 2-101 (242)
26 PRK10749 lysophospholipase L2; 96.2 0.038 8.2E-07 55.8 10.9 125 92-254 40-167 (330)
27 TIGR03695 menH_SHCHC 2-succiny 96.2 0.015 3.2E-07 53.5 7.3 105 109-253 1-105 (251)
28 TIGR02240 PHA_depoly_arom poly 96.0 0.038 8.3E-07 53.8 9.3 117 92-254 11-127 (276)
29 PRK03204 haloalkane dehalogena 95.9 0.025 5.5E-07 55.8 7.8 103 109-253 34-136 (286)
30 PRK03592 haloalkane dehalogena 95.9 0.028 6E-07 55.3 8.0 104 109-255 27-130 (295)
31 PRK05077 frsA fermentation/res 95.9 0.034 7.4E-07 58.4 9.0 80 158-254 222-301 (414)
32 TIGR02821 fghA_ester_D S-formy 95.5 0.11 2.3E-06 51.2 10.5 42 206-256 135-176 (275)
33 PRK14875 acetoin dehydrogenase 95.1 0.084 1.8E-06 53.3 8.4 103 107-252 129-231 (371)
34 PLN02679 hydrolase, alpha/beta 94.9 0.11 2.3E-06 53.3 8.5 104 108-252 87-190 (360)
35 TIGR03343 biphenyl_bphD 2-hydr 94.9 0.12 2.7E-06 49.8 8.6 62 158-229 60-121 (282)
36 PLN02442 S-formylglutathione h 94.8 0.19 4.2E-06 49.8 10.0 57 188-256 125-181 (283)
37 PRK10349 carboxylesterase BioH 94.8 0.05 1.1E-06 52.1 5.6 94 110-251 14-107 (256)
38 TIGR03101 hydr2_PEP hydrolase, 94.8 0.17 3.6E-06 50.2 9.3 131 92-260 9-141 (266)
39 PLN03084 alpha/beta hydrolase 94.6 0.11 2.3E-06 54.2 8.0 132 72-253 100-232 (383)
40 PRK10566 esterase; Provisional 94.6 0.14 3E-06 48.8 8.0 110 94-228 12-126 (249)
41 KOG1515|consensus 94.5 0.29 6.2E-06 50.2 10.4 136 92-256 71-210 (336)
42 PF00326 Peptidase_S9: Prolyl 94.5 0.047 1E-06 51.2 4.4 94 156-259 12-105 (213)
43 PF00561 Abhydrolase_1: alpha/ 94.3 0.11 2.3E-06 47.9 6.4 78 160-253 2-79 (230)
44 COG0596 MhpC Predicted hydrola 94.3 0.15 3.3E-06 46.1 7.4 104 109-254 21-124 (282)
45 TIGR01738 bioH putative pimelo 94.3 0.084 1.8E-06 48.6 5.7 96 109-252 4-99 (245)
46 PLN03087 BODYGUARD 1 domain co 94.3 0.23 5.1E-06 53.3 9.6 133 75-251 175-307 (481)
47 TIGR01840 esterase_phb esteras 94.2 0.17 3.7E-06 47.6 7.6 38 189-227 76-113 (212)
48 PRK05855 short chain dehydroge 94.2 0.16 3.4E-06 54.5 8.3 96 92-222 12-107 (582)
49 PRK10115 protease 2; Provision 93.8 0.23 5.1E-06 55.6 8.9 137 92-259 426-565 (686)
50 KOG4409|consensus 93.7 0.18 3.9E-06 51.5 7.0 84 157-256 115-198 (365)
51 PRK08775 homoserine O-acetyltr 93.7 0.48 1.1E-05 48.0 10.4 76 157-254 98-174 (343)
52 PLN02511 hydrolase 93.7 0.48 1E-05 49.2 10.5 106 92-227 81-191 (388)
53 PLN02211 methyl indole-3-aceta 93.3 0.22 4.8E-06 49.0 6.8 106 107-252 16-121 (273)
54 TIGR01607 PST-A Plasmodium sub 93.3 0.21 4.6E-06 50.6 6.9 96 157-254 73-186 (332)
55 PLN02965 Probable pheophorbida 93.0 0.26 5.7E-06 47.3 6.8 77 158-252 30-106 (255)
56 PLN02980 2-oxoglutarate decarb 92.9 0.3 6.4E-06 60.0 8.6 106 106-251 1368-1478(1655)
57 PRK07581 hypothetical protein; 92.4 0.48 1E-05 47.7 8.0 128 93-253 26-159 (339)
58 COG2267 PldB Lysophospholipase 92.2 0.63 1.4E-05 46.7 8.6 129 91-257 18-146 (298)
59 PLN02578 hydrolase 91.8 0.32 6.9E-06 49.6 6.0 76 157-252 111-186 (354)
60 PRK06489 hypothetical protein; 90.9 0.76 1.6E-05 46.9 7.7 128 93-252 50-188 (360)
61 cd00707 Pancreat_lipase_like P 90.8 1.3 2.8E-05 43.9 9.0 82 157-252 65-146 (275)
62 PF06500 DUF1100: Alpha/beta h 90.8 0.18 4E-06 52.8 3.1 80 157-253 217-296 (411)
63 KOG1455|consensus 90.8 1.9 4.1E-05 43.4 10.0 124 91-253 36-164 (313)
64 COG3509 LpqC Poly(3-hydroxybut 90.0 0.9 2E-05 45.5 6.9 114 92-229 44-164 (312)
65 PRK00175 metX homoserine O-ace 90.0 2 4.2E-05 44.4 9.9 135 92-253 32-182 (379)
66 TIGR00976 /NonD putative hydro 89.7 1.3 2.8E-05 48.2 8.6 130 92-257 6-136 (550)
67 PRK10985 putative hydrolase; P 89.5 2.3 4.9E-05 42.8 9.7 31 93-123 42-72 (324)
68 PRK10162 acetyl esterase; Prov 88.5 2.2 4.7E-05 43.0 8.7 45 208-255 153-197 (318)
69 TIGR03230 lipo_lipase lipoprot 88.4 4 8.7E-05 43.4 10.9 67 158-229 73-139 (442)
70 cd00312 Esterase_lipase Estera 88.3 2.2 4.8E-05 45.4 9.1 33 191-224 159-191 (493)
71 TIGR03100 hydr1_PEP hydrolase, 87.8 2.1 4.5E-05 42.0 7.9 79 159-255 58-136 (274)
72 PLN00021 chlorophyllase 87.8 1.9 4.2E-05 43.6 7.8 123 96-254 41-167 (313)
73 KOG1838|consensus 87.2 3.3 7.1E-05 43.5 9.2 123 92-253 104-236 (409)
74 PLN02454 triacylglycerol lipas 86.2 1.7 3.7E-05 45.6 6.5 70 184-255 204-273 (414)
75 PF00975 Thioesterase: Thioest 84.8 2.5 5.3E-05 39.6 6.4 77 159-253 28-104 (229)
76 KOG2100|consensus 84.3 2 4.4E-05 48.7 6.5 152 93-275 508-665 (755)
77 PF10503 Esterase_phd: Esteras 82.8 2.3 5E-05 41.0 5.3 40 205-253 93-132 (220)
78 PF01764 Lipase_3: Lipase (cla 79.7 3.8 8.3E-05 35.3 5.3 63 187-254 45-107 (140)
79 KOG4178|consensus 78.1 24 0.00052 36.0 10.9 133 76-258 22-158 (322)
80 PLN02872 triacylglycerol lipas 77.2 9.3 0.0002 40.0 8.1 94 107-223 72-174 (395)
81 PF12695 Abhydrolase_5: Alpha/ 77.0 3 6.5E-05 35.6 3.7 70 159-254 27-96 (145)
82 PRK11460 putative hydrolase; P 75.9 7.7 0.00017 37.2 6.6 37 191-228 86-122 (232)
83 PLN02571 triacylglycerol lipas 75.9 6.7 0.00015 41.3 6.5 71 184-255 202-277 (413)
84 COG0400 Predicted esterase [Ge 74.5 9.9 0.00021 36.3 6.8 82 165-256 56-137 (207)
85 PF10230 DUF2305: Uncharacteri 73.9 15 0.00034 36.1 8.3 59 182-247 58-116 (266)
86 PF07859 Abhydrolase_3: alpha/ 73.8 8.7 0.00019 35.4 6.2 63 187-255 47-112 (211)
87 PF00151 Lipase: Lipase; Inte 73.7 2.4 5.2E-05 43.4 2.6 71 157-232 103-173 (331)
88 COG0657 Aes Esterase/lipase [L 71.1 17 0.00038 36.0 8.1 128 96-257 66-195 (312)
89 PF11144 DUF2920: Protein of u 70.7 7.2 0.00016 40.9 5.2 70 180-258 154-224 (403)
90 PF08237 PE-PPE: PE-PPE domain 69.9 14 0.0003 35.7 6.8 87 160-253 4-90 (225)
91 PF05990 DUF900: Alpha/beta hy 69.1 9 0.0002 37.0 5.3 70 188-257 71-141 (233)
92 cd00741 Lipase Lipase. Lipase 68.8 9.3 0.0002 33.8 5.0 61 186-253 8-68 (153)
93 PF03283 PAE: Pectinacetyleste 67.3 35 0.00075 35.4 9.4 151 93-255 35-199 (361)
94 PF11288 DUF3089: Protein of u 66.8 7 0.00015 37.4 3.9 43 186-230 74-116 (207)
95 cd00519 Lipase_3 Lipase (class 65.3 9 0.00019 36.3 4.4 68 180-254 102-169 (229)
96 PF05577 Peptidase_S28: Serine 62.7 8.7 0.00019 40.3 4.1 68 184-260 88-155 (434)
97 PF02230 Abhydrolase_2: Phosph 60.5 20 0.00043 33.6 5.8 77 187-274 85-168 (216)
98 PRK10439 enterobactin/ferric e 60.1 22 0.00047 37.5 6.5 23 97-119 197-219 (411)
99 PRK05371 x-prolyl-dipeptidyl a 58.1 18 0.00039 41.3 5.9 94 150-255 271-375 (767)
100 PLN02753 triacylglycerol lipas 57.5 25 0.00055 38.2 6.5 72 184-255 285-361 (531)
101 PLN02719 triacylglycerol lipas 55.9 27 0.00058 37.9 6.3 72 184-255 271-347 (518)
102 PLN02761 lipase class 3 family 55.9 27 0.00058 37.9 6.3 72 184-255 266-344 (527)
103 PF05728 UPF0227: Uncharacteri 54.2 18 0.0004 33.8 4.3 43 206-260 56-98 (187)
104 PLN02324 triacylglycerol lipas 53.7 32 0.00069 36.4 6.3 70 184-254 191-266 (415)
105 KOG2182|consensus 52.9 23 0.00049 38.1 5.1 39 184-222 147-185 (514)
106 PF02129 Peptidase_S15: X-Pro 52.6 18 0.00038 35.4 4.1 95 159-274 58-152 (272)
107 KOG1454|consensus 52.0 52 0.0011 33.5 7.5 63 159-230 87-149 (326)
108 COG0627 Predicted esterase [Ge 50.9 47 0.001 33.8 6.9 114 107-228 51-171 (316)
109 TIGR01392 homoserO_Ac_trn homo 50.1 1.3E+02 0.0028 30.4 10.1 127 92-253 15-162 (351)
110 KOG2183|consensus 49.2 26 0.00056 37.1 4.7 63 158-223 111-181 (492)
111 PF05677 DUF818: Chlamydia CHL 49.2 33 0.00071 35.4 5.4 58 157-222 170-228 (365)
112 PF06057 VirJ: Bacterial virul 48.3 28 0.00061 32.9 4.5 63 183-253 45-107 (192)
113 KOG4627|consensus 45.9 25 0.00055 33.9 3.8 73 168-254 101-173 (270)
114 PF08538 DUF1749: Protein of u 45.1 1.1E+02 0.0023 31.2 8.3 146 184-356 82-230 (303)
115 COG0429 Predicted hydrolase of 44.8 43 0.00094 34.4 5.5 121 91-252 59-185 (345)
116 KOG4391|consensus 44.2 92 0.002 30.4 7.3 121 93-255 65-186 (300)
117 COG4099 Predicted peptidase [G 43.6 2.8E+02 0.0061 28.5 10.8 32 88-119 167-201 (387)
118 PF00681 Plectin: Plectin repe 43.3 14 0.00029 26.3 1.2 31 251-281 12-43 (45)
119 KOG2281|consensus 42.2 58 0.0013 36.4 6.2 110 107-257 640-766 (867)
120 KOG3079|consensus 39.5 17 0.00036 34.3 1.5 15 107-121 5-19 (195)
121 PLN02310 triacylglycerol lipas 39.0 62 0.0013 34.2 5.8 65 186-254 185-250 (405)
122 PLN02934 triacylglycerol lipas 36.9 70 0.0015 34.7 5.8 41 189-232 304-344 (515)
123 PRK14567 triosephosphate isome 36.5 80 0.0017 31.2 5.8 63 186-258 178-240 (253)
124 PLN02408 phospholipase A1 36.1 61 0.0013 33.7 5.1 64 187-254 179-242 (365)
125 PF10081 Abhydrolase_9: Alpha/ 36.0 47 0.001 33.4 4.1 38 184-221 84-121 (289)
126 PLN02733 phosphatidylcholine-s 35.9 56 0.0012 34.8 5.0 40 185-227 141-180 (440)
127 smart00824 PKS_TE Thioesterase 35.5 1.4E+02 0.0031 26.4 7.1 64 158-233 25-88 (212)
128 KOG2564|consensus 35.3 52 0.0011 33.3 4.2 108 106-250 71-179 (343)
129 PLN00413 triacylglycerol lipas 33.7 74 0.0016 34.3 5.4 40 190-232 268-307 (479)
130 PLN02847 triacylglycerol lipas 33.2 58 0.0013 36.0 4.6 71 180-257 225-296 (633)
131 PF09292 Neil1-DNA_bind: Endon 33.0 25 0.00054 24.3 1.1 12 109-120 24-35 (39)
132 PF07849 DUF1641: Protein of u 31.7 18 0.00039 25.5 0.3 18 339-356 14-31 (42)
133 PF11161 DUF2944: Protein of u 31.7 82 0.0018 29.6 4.7 47 107-173 82-132 (187)
134 PF03583 LIP: Secretory lipase 31.6 1.2E+02 0.0025 30.3 6.3 69 186-258 45-118 (290)
135 PLN03037 lipase class 3 family 31.3 1.1E+02 0.0023 33.4 6.1 65 187-254 295-360 (525)
136 PRK11071 esterase YqiA; Provis 31.0 55 0.0012 30.3 3.6 50 192-256 47-96 (190)
137 COG3596 Predicted GTPase [Gene 30.8 51 0.0011 33.1 3.4 59 107-173 36-100 (296)
138 PF05057 DUF676: Putative seri 29.1 72 0.0016 30.2 4.1 49 184-233 54-102 (217)
139 PF05448 AXE1: Acetyl xylan es 28.8 1.6E+02 0.0034 29.9 6.7 141 91-254 65-210 (320)
140 PLN02802 triacylglycerol lipas 27.7 94 0.002 33.8 5.0 64 187-254 309-372 (509)
141 COG4757 Predicted alpha/beta h 27.7 86 0.0019 30.9 4.2 97 159-260 58-167 (281)
142 TIGR03502 lipase_Pla1_cef extr 27.5 1.5E+02 0.0032 34.1 6.8 46 184-229 521-575 (792)
143 PRK14566 triosephosphate isome 27.2 1.1E+02 0.0024 30.3 5.1 62 186-257 188-249 (260)
144 KOG2984|consensus 26.6 1.9E+02 0.0042 28.0 6.3 114 159-290 72-196 (277)
145 PF12740 Chlorophyllase2: Chlo 26.5 1.2E+02 0.0027 30.0 5.3 64 184-253 62-131 (259)
146 PRK06762 hypothetical protein; 26.1 40 0.00086 30.0 1.7 21 110-130 2-24 (166)
147 PF15613 WHIM2: WSTF, HB1, Itc 25.7 1.2E+02 0.0027 20.9 3.6 28 93-120 11-38 (38)
148 PRK04940 hypothetical protein; 25.4 1.4E+02 0.0029 28.0 5.1 40 209-260 60-99 (180)
149 PF01083 Cutinase: Cutinase; 25.3 91 0.002 28.7 3.9 83 160-255 41-125 (179)
150 KOG4569|consensus 24.3 1.3E+02 0.0029 30.6 5.3 59 190-253 155-213 (336)
151 PF06414 Zeta_toxin: Zeta toxi 23.8 44 0.00094 31.1 1.5 35 106-140 11-51 (199)
152 PLN02162 triacylglycerol lipas 23.4 1.5E+02 0.0033 31.9 5.6 40 190-232 262-301 (475)
153 PF00756 Esterase: Putative es 22.8 50 0.0011 31.2 1.8 56 188-256 98-153 (251)
154 PRK13604 luxD acyl transferase 21.5 2E+02 0.0042 29.3 5.7 126 92-257 19-145 (307)
155 PF06259 Abhydrolase_8: Alpha/ 21.2 1.2E+02 0.0026 28.2 3.8 64 157-228 62-128 (177)
156 COG4425 Predicted membrane pro 21.1 1.1E+02 0.0025 32.7 4.0 38 184-221 372-409 (588)
157 TIGR01836 PHA_synth_III_C poly 20.6 1.4E+02 0.003 30.2 4.5 78 159-255 95-173 (350)
158 PF15253 STIL_N: SCL-interrupt 20.2 1.3E+02 0.0029 31.7 4.3 37 74-117 198-235 (410)
159 PLN02429 triosephosphate isome 20.0 1.8E+02 0.004 29.6 5.2 64 185-258 237-301 (315)
No 1
>KOG1282|consensus
Probab=100.00 E-value=1.7e-89 Score=709.18 Aligned_cols=346 Identities=28% Similarity=0.461 Sum_probs=285.1
Q ss_pred hhccCcccC-CC----CCceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceE
Q psy3706 61 AKKLSEVKL-PG----FNIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQ 135 (443)
Q Consensus 61 a~~~~~V~~-p~----~~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~ 135 (443)
++..++|.. || .++++|||||+| +++.+++||||||||+++|+++||||||||||||||+.|+|.|+|||+
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v----~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~ 99 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTV----NESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFR 99 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEEC----CCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeE
Confidence 445566765 66 369999999999 888899999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEe
Q psy3706 136 LNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITG 215 (443)
Q Consensus 136 v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~G 215 (443)
|+.|+++ |+.|+||||+.||||||||||||||||+++..++.++++.+|+|+++||++||++||||++|||||+|
T Consensus 100 v~~~G~t-----L~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~G 174 (454)
T KOG1282|consen 100 VKYNGKT-----LYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAG 174 (454)
T ss_pred EcCCCCc-----ceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEec
Confidence 9988776 99999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred cccccccchhhhHHHhhcCCC-CcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHhcc
Q psy3706 216 ETYIGQFGTSLGFNIYQNNPV-TDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIFQK 293 (443)
Q Consensus 216 ESYaG~yvP~la~~I~~~n~~-~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~~~ 293 (443)
|||||||||+||++|+++|+. .++.|||||++||||++||..|.. +.+|+|.||||++++++.+++.|+.+...+.+.
T Consensus 175 ESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~ 254 (454)
T KOG1282|consen 175 ESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANV 254 (454)
T ss_pred ccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCccccccc
Confidence 999999999999999999975 467899999999999999999999 999999999999999999999999875422221
Q ss_pred -----CHHHHHHHHHHhhhccCCCcccccccccccccc-C---ccCC-CCCCCCchhHHhhcCcHHHHHHhCCCCc---C
Q psy3706 294 -----KLGEAFDVYDELIVGTFHDKTIYNTLTNFTNLY-N---YQVP-IADNTPNTLMVELFNTTTFRKAVHVGNT---T 360 (443)
Q Consensus 294 -----~~~~a~~~~d~~l~g~~~~~s~f~~~tG~~n~y-n---~~~~-~~dP~~~~~~~~yLN~pdVrkALHV~~~---~ 360 (443)
.|.++.+.++....+.+..+.++... |...- . .+.+ ..+||-..+.++|||+++||+||||+.. .
T Consensus 255 ~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~--C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~ 332 (454)
T KOG1282|consen 255 DPSNTKCNKAVEEFDSKTTGDIDNYYILTPD--CYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGK 332 (454)
T ss_pred CCchhHHHHHHHHHHHHHhccCchhhhcchh--hccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCc
Confidence 23334443332221212222222211 11100 0 0001 0356655566999999999999999865 4
Q ss_pred ccCChHHHHhhhcCCCCCChHHHHHHHhh-h-ccCC---CCceeEecccchhhHHHHHHHHHhhh
Q psy3706 361 YDTSVTEDVFLKNDIMGSRQFPCITGLLS-F-MKQG---PGVSVSCELSVSSFFSAVARMFLRIF 420 (443)
Q Consensus 361 w~~~~~V~~~l~~D~m~s~v~p~l~~LL~-~-~rVl---Gd~D~~cn~~~~~~~~~~~~~~l~~~ 420 (443)
|..|+.+...-+.|...+ |+|.+.+++. . +||| ||+|++||++++++ .|++|.++++
T Consensus 333 W~~Cn~~v~~~~~~~~~s-m~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~--~i~~L~~~~~ 394 (454)
T KOG1282|consen 333 WERCNDEVNYNYNDDIKS-MLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQA--WIKSLNLSIT 394 (454)
T ss_pred ccccChhhhcccccCccc-hHHHHHHHhhcCceEEEEEeCCcceeCcchhhHH--HHHhccCccc
Confidence 999877665447788888 9999999998 4 9999 99999999977655 8888886554
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1e-79 Score=634.41 Aligned_cols=330 Identities=32% Similarity=0.541 Sum_probs=254.3
Q ss_pred CceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCc
Q psy3706 73 NIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRK 152 (443)
Q Consensus 73 ~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~ 152 (443)
++++|||||+| +++.+++||||||||+++|+++|||||||||||||||.|+|.|+|||+|++++. .+++.|+
T Consensus 8 ~~~~~sGyl~~----~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~----~~l~~n~ 79 (415)
T PF00450_consen 8 PFKQYSGYLPV----NDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGP----YTLEDNP 79 (415)
T ss_dssp SSEEEEEEEEE----CTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTST----SEEEE-T
T ss_pred CceEEEEEEec----CCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeeccc----ccccccc
Confidence 68999999999 767789999999999999999999999999999999999999999999994431 1299999
Q ss_pred CccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 153 TYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 153 ~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
+||++.+|||||||||||||||+.+.+.+.++++++|+++++||++||++||+++++||||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHhccCHHHHHHHHHHhhhccC
Q psy3706 233 NNPV-TDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIFQKKLGEAFDVYDELIVGTF 310 (443)
Q Consensus 233 ~n~~-~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~d~~l~g~~ 310 (443)
+|.. ..++||||||+||||++||..|.. +.+|+|.+|+|++++++.+++.|+.+..|. .....|.+.++.+..-
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~~~~~~-- 235 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQ--KAITECAAALDELSCQ-- 235 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSS--CCHHHHHHHHHHHHHH--
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcccccc--chhhHHHHHHHhhhhh--
Confidence 8864 347899999999999999999999 999999999999999999999886441111 1112222222222110
Q ss_pred CCccccccccccccccCccCCC-------------CCCCCchhHHhhcCcHHHHHHhCCC---CcCccCC-hHH-HHhhh
Q psy3706 311 HDKTIYNTLTNFTNLYNYQVPI-------------ADNTPNTLMVELFNTTTFRKAVHVG---NTTYDTS-VTE-DVFLK 372 (443)
Q Consensus 311 ~~~s~f~~~tG~~n~yn~~~~~-------------~dP~~~~~~~~yLN~pdVrkALHV~---~~~w~~~-~~V-~~~l~ 372 (443)
.......++.+.||++... .++.....+..|||+++||+||||+ ..+|..| ..| ...+.
T Consensus 236 ---~~~~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~ 312 (415)
T PF00450_consen 236 ---YAISQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLY 312 (415)
T ss_dssp ---CHHHHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCT
T ss_pred ---cccccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccccccccc
Confidence 0001123445666666521 2234567899999999999999996 3579885 457 45568
Q ss_pred cCCCCCChHHHHHHHhhh-ccCC---CCceeEecccchhhHHHHHHHHHhhhhcee
Q psy3706 373 NDIMGSRQFPCITGLLSF-MKQG---PGVSVSCELSVSSFFSAVARMFLRIFLSYL 424 (443)
Q Consensus 373 ~D~m~s~v~p~l~~LL~~-~rVl---Gd~D~~cn~~~~~~~~~~~~~~l~~~~~~~ 424 (443)
.|.+.+ +.+.+++||++ +||| ||.|++||+. +.++...++.|++.
T Consensus 313 ~d~~~~-~~~~l~~lL~~~irVLiy~Gd~D~i~n~~------Gt~~~i~~L~w~~~ 361 (415)
T PF00450_consen 313 DDFMPS-SIPDLPELLDNGIRVLIYNGDLDLICNFL------GTERWIDNLNWSGK 361 (415)
T ss_dssp CCC-SB-CHHHHHHHHHTT-EEEEEEETT-SSS-HH------HHHHHHHCTECTEE
T ss_pred cccccc-chhhhhhhhhccceeEEeccCCCEEEEec------cchhhhhccccCcc
Confidence 899999 99999999996 9999 9999999994 45556666777765
No 3
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2e-77 Score=623.14 Aligned_cols=343 Identities=22% Similarity=0.346 Sum_probs=262.4
Q ss_pred hccCcccC-CCC----CceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEE
Q psy3706 62 KKLSEVKL-PGF----NIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQL 136 (443)
Q Consensus 62 ~~~~~V~~-p~~----~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v 136 (443)
...++|+. ||. ++++|||||+| +++.+++||||||||+++|+++|||||||||||||||.|+|.|+|||++
T Consensus 20 ~~~~~v~~lpg~~~~~~~~~~sGy~~v----~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~ 95 (437)
T PLN02209 20 RSGSIVKFLPGFKGPLPFELETGYIGI----GEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLAL 95 (437)
T ss_pred CccCeeecCCCCCCCCCeeEEEEEEEe----cCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCcee
Confidence 34456776 874 68999999999 7767889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEec
Q psy3706 137 NKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGE 216 (443)
Q Consensus 137 ~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GE 216 (443)
+.++.....+++++|++||++.||||||||||||||||+.++..+. +++++|+++++||++||++||+|+++||||+||
T Consensus 96 ~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 174 (437)
T PLN02209 96 KNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT-SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGD 174 (437)
T ss_pred ccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhCccccCCCEEEEec
Confidence 8764211223499999999999999999999999999988765554 455667999999999999999999999999999
Q ss_pred ccccccchhhhHHHhhcCCC-CcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHh--c
Q psy3706 217 TYIGQFGTSLGFNIYQNNPV-TDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIF--Q 292 (443)
Q Consensus 217 SYaG~yvP~la~~I~~~n~~-~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~--~ 292 (443)
||||||||++|++|+++|.. .+++||||||+|||||+||..|.. |.+|+|.+||||+++++.+++.|..+..... .
T Consensus 175 SYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~ 254 (437)
T PLN02209 175 SYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSN 254 (437)
T ss_pred CcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCCh
Confidence 99999999999999998753 456899999999999999999999 9999999999999999999998864211000 0
Q ss_pred cCHHHHHH---HHHHhhhccCCCccccccccccccccCccCCCCCCCCchhHHhhcCcHHHHHHhCCCCc---CccCChH
Q psy3706 293 KKLGEAFD---VYDELIVGTFHDKTIYNTLTNFTNLYNYQVPIADNTPNTLMVELFNTTTFRKAVHVGNT---TYDTSVT 366 (443)
Q Consensus 293 ~~~~~a~~---~~d~~l~g~~~~~s~f~~~tG~~n~yn~~~~~~dP~~~~~~~~yLN~pdVrkALHV~~~---~w~~~~~ 366 (443)
..|..+.+ .+...++. ...++.+..+...+++...| .+.+...+..|||+|+||+||||+.. .|..|+.
T Consensus 255 ~~C~~~i~~~~~~~~~~~~---~~~~~~~c~~~~~~~~~~~c--~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~ 329 (437)
T PLN02209 255 KKCLKLVEEYHKCTDNINS---HHTLIANCDDSNTQHISPDC--YYYPYHLVECWANNESVREALHVDKGSIGEWIRDHR 329 (437)
T ss_pred HHHHHHHHHHHHHhhcCCc---cccccccccccccccCCCCc--ccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccc
Confidence 11111211 12221211 00122222222222232223 12223468999999999999999853 4766543
Q ss_pred HHHhhhcCCCCCChHHHHHHHhhhccCC---CCceeEecccchhhHHHHHHHHHh
Q psy3706 367 EDVFLKNDIMGSRQFPCITGLLSFMKQG---PGVSVSCELSVSSFFSAVARMFLR 418 (443)
Q Consensus 367 V~~~l~~D~m~s~v~p~l~~LL~~~rVl---Gd~D~~cn~~~~~~~~~~~~~~l~ 418 (443)
...+..|.+.+ +...++.|++++||| ||.|++|||+++.. -+++|..+
T Consensus 330 -~~~~~~d~~~~-~~~~~~~l~~girVLiY~GD~D~icn~~Gte~--wi~~L~w~ 380 (437)
T PLN02209 330 -GIPYKSDIRSS-IPYHMNNSINGYRSLIFSGDHDITMPFQATQA--WIKSLNYS 380 (437)
T ss_pred -hhhcccchhhh-HHHHHHHHhcCceEEEEECCccccCCcHhHHH--HHHhcCCc
Confidence 33467788877 666777777789999 99999999965443 45555543
No 4
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.4e-76 Score=620.63 Aligned_cols=314 Identities=25% Similarity=0.464 Sum_probs=271.8
Q ss_pred CceeEeeEEEeeccCCC-CCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccC
Q psy3706 73 NIESYSGFFRVNSTEDK-KYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKR 151 (443)
Q Consensus 73 ~~~~ysGyl~V~~~~~~-~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n 151 (443)
++++|||||+| +. ..+++||||||||+++|+++|||||||||||||||.|+|.|+|||+|++++.. ++.|
T Consensus 44 ~~~~~sGy~~v----~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~-----~~~n 114 (462)
T PTZ00472 44 SVNQWSGYFDI----PGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGD-----IYNN 114 (462)
T ss_pred CCcceeEEEEe----CCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCc-----eeEC
Confidence 57899999999 53 45789999999999999999999999999999999999999999999998643 9999
Q ss_pred cCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHh
Q psy3706 152 KTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIY 231 (443)
Q Consensus 152 ~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~ 231 (443)
++||++.+||||||||+||||||+... .+..+++++|+|+++||+.||++||+++.++|||+||||||+|||++|.+|+
T Consensus 115 ~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 115 TYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred CcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 999999999999999999999998654 5778899999999999999999999999999999999999999999999999
Q ss_pred hcCCC-CcceeeeeeeEecCCccChhhHHH-HHHHHHh-------cCCCChhhHHHHHHHHHHHHHHHhccC-------H
Q psy3706 232 QNNPV-TDIKINLKGFALGNDLTDPLYMML-YSKYLYQ-------IGLIDDNGRKLFEYKEKQITDLIFQKK-------L 295 (443)
Q Consensus 232 ~~n~~-~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~-------~GLId~~~~~~~~~~~~~~~~~i~~~~-------~ 295 (443)
++|+. ...+||||||+|||||+||..|+. |.+|+|. +|+|++++++.+++.+..|.+.+.+|+ .
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~ 273 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADS 273 (462)
T ss_pred hhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcch
Confidence 98864 347899999999999999999999 9999996 589999999999998888887776643 2
Q ss_pred HH--HHHHHHHhhhccCCCccccccccccccccCccC-CCCCCC-CchhHHhhcCcHHHHHHhCCCCcCccC-ChHHHHh
Q psy3706 296 GE--AFDVYDELIVGTFHDKTIYNTLTNFTNLYNYQV-PIADNT-PNTLMVELFNTTTFRKAVHVGNTTYDT-SVTEDVF 370 (443)
Q Consensus 296 ~~--a~~~~d~~l~g~~~~~s~f~~~tG~~n~yn~~~-~~~dP~-~~~~~~~yLN~pdVrkALHV~~~~w~~-~~~V~~~ 370 (443)
.| |...|+.++. ++. .+..+.||++. |..++| ....+.+|||+|+||+||||++.+|.. +..|...
T Consensus 274 ~c~~a~~~c~~~~~-------~~~--~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~ 344 (462)
T PTZ00472 274 SCSVARALCNEYIA-------VYS--ATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLM 344 (462)
T ss_pred HHHHHHHHHHHHHH-------HHH--hcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHH
Confidence 23 4455555432 222 23467888876 412234 345789999999999999998778998 5668888
Q ss_pred hhcCCCCCChHHHHHHHhh-hccCC---CCceeEecccch
Q psy3706 371 LKNDIMGSRQFPCITGLLS-FMKQG---PGVSVSCELSVS 406 (443)
Q Consensus 371 l~~D~m~s~v~p~l~~LL~-~~rVl---Gd~D~~cn~~~~ 406 (443)
+..|++++ +.+.|++||+ ++||| ||.|++||+.++
T Consensus 345 ~~~D~~~~-~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt 383 (462)
T PTZ00472 345 FEMDWMKN-FNYTVPGLLEDGVRVMIYAGDMDFICNWIGN 383 (462)
T ss_pred hhhccccc-hHHHHHHHHhcCceEEEEECCcCeecCcHhH
Confidence 89999998 9999999998 59999 999999999654
No 5
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.2e-77 Score=621.34 Aligned_cols=329 Identities=23% Similarity=0.335 Sum_probs=257.4
Q ss_pred CcccC-CCC----CceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCC
Q psy3706 65 SEVKL-PGF----NIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKN 139 (443)
Q Consensus 65 ~~V~~-p~~----~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~ 139 (443)
+.|+. ||. ++++|||||+| +++.+++||||||||+++|+++|||||||||||||||.|+|.|+|||+++.+
T Consensus 21 ~~v~~lpg~~~~~~~~~~sGy~~v----~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~ 96 (433)
T PLN03016 21 SIVKFLPGFEGPLPFELETGYIGI----GEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFE 96 (433)
T ss_pred CeeecCcCCCCCCCeeEEEEEEEe----cCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeecc
Confidence 44665 773 58999999999 7666789999999999999999999999999999999999999999998754
Q ss_pred CCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccc
Q psy3706 140 KKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYI 219 (443)
Q Consensus 140 ~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYa 219 (443)
....+.++++.|++||++.||||||||||||||||++++..+. +++++|+++++||++||++||||+++||||+|||||
T Consensus 97 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~-~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 97 VFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT-GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred ccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc-CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 2111223599999999999999999999999999988765554 455666999999999999999999999999999999
Q ss_pred cccchhhhHHHhhcCCC-CcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHh--ccCH
Q psy3706 220 GQFGTSLGFNIYQNNPV-TDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIF--QKKL 295 (443)
Q Consensus 220 G~yvP~la~~I~~~n~~-~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~--~~~~ 295 (443)
|||||++|++|+++|+. .+++||||||+||||++||..|.. +.+|+|++||||+++++.+++.|+.+...+. ...|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 99999999999998863 457899999999999999999999 9999999999999999999998875432211 0112
Q ss_pred HHHHHHHHHhhhccCCCccccccccccccccCcc-C-CC-----CCCCC---chhHHhhcCcHHHHHHhCCCC---cCcc
Q psy3706 296 GEAFDVYDELIVGTFHDKTIYNTLTNFTNLYNYQ-V-PI-----ADNTP---NTLMVELFNTTTFRKAVHVGN---TTYD 362 (443)
Q Consensus 296 ~~a~~~~d~~l~g~~~~~s~f~~~tG~~n~yn~~-~-~~-----~dP~~---~~~~~~yLN~pdVrkALHV~~---~~w~ 362 (443)
.++...+.. .++..+.||++ . |. ..+|. ...+.+|||+++||+||||+. .+|.
T Consensus 256 ~~~~~~~~~--------------~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~ 321 (433)
T PLN03016 256 LKLTEEYHK--------------CTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWA 321 (433)
T ss_pred HHHHHHHHH--------------HhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCc
Confidence 222222111 11222333333 1 10 01221 246789999999999999973 4799
Q ss_pred CCh-HHHHhhhcCCCCCChHHHHHHHhhhccCC---CCceeEecccchhhHHHHHHHHH
Q psy3706 363 TSV-TEDVFLKNDIMGSRQFPCITGLLSFMKQG---PGVSVSCELSVSSFFSAVARMFL 417 (443)
Q Consensus 363 ~~~-~V~~~l~~D~m~s~v~p~l~~LL~~~rVl---Gd~D~~cn~~~~~~~~~~~~~~l 417 (443)
.|+ .|. +..|.+.+ +...++.|++++||| ||.|++||+++++. -+++|.+
T Consensus 322 ~cn~~v~--~~~d~~~~-~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~--wi~~L~w 375 (433)
T PLN03016 322 RCNRTIP--YNHDIVSS-IPYHMNNSISGYRSLIYSGDHDIAVPFLATQA--WIRSLNY 375 (433)
T ss_pred cCCcccc--cccccchh-hHHHHHHHhcCceEEEEECCccccCCcHhHHH--HHHhCCC
Confidence 854 444 56788766 656666666789999 99999999976554 4555543
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-55 Score=448.81 Aligned_cols=326 Identities=22% Similarity=0.317 Sum_probs=253.0
Q ss_pred CceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccc--c
Q psy3706 73 NIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVE--K 150 (443)
Q Consensus 73 ~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~--~ 150 (443)
.+++|+||.++ .. .+|||+|++.++|+++|+|+||||||||||+.|+|.|+||.+|+.+.+ .. .
T Consensus 73 pv~~~~g~~d~----ed----~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~------P~~~~ 138 (498)
T COG2939 73 PVRDYTGYPDA----ED----FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTS------PSYPD 138 (498)
T ss_pred chhhccCCccc----ce----eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCC------CCCCC
Confidence 47888888555 21 299999999999999999999999999999999999999999998853 33 5
Q ss_pred CcCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCC--cEEEEecccccccchhhhH
Q psy3706 151 RKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRN--DFFITGETYIGQFGTSLGF 228 (443)
Q Consensus 151 n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~--~~yi~GESYaG~yvP~la~ 228 (443)
||+||+.++||||||||+|||||++ ..+....+.+.+.+|++.|++.||+.||++.+. ++||+||||||+|+|.||+
T Consensus 139 NP~SW~~~adLvFiDqPvGTGfS~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 139 NPGSWLDFADLVFIDQPVGTGFSRA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred CccccccCCceEEEecCcccCcccc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 9999999999999999999999998 333577899999999999999999999999998 9999999999999999999
Q ss_pred HHhhcCCCCcceeeeeeeEecCC-ccChhhHHH-HHHHHHhcCC----CChhhHHHHHHHHHH--HHHHHhcc----CHH
Q psy3706 229 NIYQNNPVTDIKINLKGFALGND-LTDPLYMML-YSKYLYQIGL----IDDNGRKLFEYKEKQ--ITDLIFQK----KLG 296 (443)
Q Consensus 229 ~I~~~n~~~~~~iNLkGi~IGNG-~~dp~~q~~-y~~f~y~~GL----Id~~~~~~~~~~~~~--~~~~i~~~----~~~ 296 (443)
+|+++|...+..+||++++|||| +|||..|+. |..++...+. .+.+.++++++.|+. |..++..+ .+.
T Consensus 218 ~L~~~~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~ 297 (498)
T COG2939 218 ELLEDNIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQ 297 (498)
T ss_pred HHHHhccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhh
Confidence 99998755566799999999999 999999999 9999986554 444556666665554 34444333 122
Q ss_pred HHHHHHHHhhhccCCCccccccccc--cccccCccC-CCCCCC-------CchhHHhhcCcHHHHHHhCCCCcCccCC-h
Q psy3706 297 EAFDVYDELIVGTFHDKTIYNTLTN--FTNLYNYQV-PIADNT-------PNTLMVELFNTTTFRKAVHVGNTTYDTS-V 365 (443)
Q Consensus 297 ~a~~~~d~~l~g~~~~~s~f~~~tG--~~n~yn~~~-~~~dP~-------~~~~~~~yLN~pdVrkALHV~~~~w~~~-~ 365 (443)
.|....-. +.+. .+.++. .+| +.|.|+++. | .+|. ......+|++-..+++++......|..| .
T Consensus 298 ~c~~~~~~-~~~~--~~~~~~-r~~~~~~n~y~~r~~~-~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t 372 (498)
T COG2939 298 PCENASAY-LTGL--MREYVG-RAGGRLLNVYDIREEC-RDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTT 372 (498)
T ss_pred HHHHHHHH-HHhc--chhhhc-cccccccccccchhhc-CCCCcccccccceeeccccccccchhccccccccchhccch
Confidence 22221111 1211 111222 233 578888876 4 4432 3446788999888899888776678874 5
Q ss_pred HHHHhh---hcCCCCCChHHHHHHHhhh-ccCC---CCceeEecccchhhHHHHHHHHHhhhhceeE
Q psy3706 366 TEDVFL---KNDIMGSRQFPCITGLLSF-MKQG---PGVSVSCELSVSSFFSAVARMFLRIFLSYLV 425 (443)
Q Consensus 366 ~V~~~l---~~D~m~s~v~p~l~~LL~~-~rVl---Gd~D~~cn~~~~~~~~~~~~~~l~~~~~~~~ 425 (443)
+|...| ..++++. ....+..++.+ ..++ ||.|++||+ .+.+++-..|-|.++.
T Consensus 373 ~a~~~f~~~~~~~~~~-~~~~~~~~lv~~~~~~~~~gd~d~icn~------~~~~a~~~~Lkw~~~~ 432 (498)
T COG2939 373 DAMTDFLTFTGGWAKP-SRYLVLNLLVNNVWILLYAGDKDFICNL------RGNMALDPKLKWLGAS 432 (498)
T ss_pred HHHHhhhhhcCCcccc-cHHHHhhhhhcCCceeeeecCchhHhhh------hhhcccCCcceEeeec
Confidence 566555 5899988 88888888874 6666 999999999 4566666666676654
No 7
>KOG1283|consensus
Probab=100.00 E-value=4.1e-52 Score=403.16 Aligned_cols=303 Identities=25% Similarity=0.421 Sum_probs=259.8
Q ss_pred eeEEEeeccCCCCCCceEEEEEeecCCCC-CCCCEEEEecCCCCchhh-ccccccccceEEcCCCCCCCCcccccCcCcc
Q psy3706 78 SGFFRVNSTEDKKYSSALFFWFFPAEEYP-SNAPVLLWLNAGLGSSSM-TGLFQENGPLQLNKNKKRQPLPYVEKRKTYW 155 (443)
Q Consensus 78 sGyl~V~~~~~~~~~~~lFfwffes~~~~-~~~PlvlWlnGGPG~SSl-~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW 155 (443)
.||++| +.+.|+|+|.+.+...- ...|+.||||||||+||. +|.|.|+||...+ +.+|+.+|
T Consensus 5 wg~v~v------r~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TW 68 (414)
T KOG1283|consen 5 WGYVDV------RTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTW 68 (414)
T ss_pred ccceee------ecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchh
Confidence 589999 45789999999987654 789999999999999986 8999999999753 77899999
Q ss_pred ccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCC
Q psy3706 156 SKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 156 ~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
-+.|+|||||+|||+||||.+..+.|.++.+++|.||.+.|++||..+|||+.+||||+-|||||+..|.+|..+...-+
T Consensus 69 lk~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk 148 (414)
T KOG1283|consen 69 LKDADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIK 148 (414)
T ss_pred hhhccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred CCcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHhccCHHHHHHHHHHhhhccCCCcc
Q psy3706 236 VTDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIFQKKLGEAFDVYDELIVGTFHDKT 314 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~d~~l~g~~~~~s 314 (443)
.++.+.|+.|||+|+.||.|+.-.. +++|+|+.+++|+++.+..++...+|...+..+.|.+|.......- .
T Consensus 149 ~G~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e-------~ 221 (414)
T KOG1283|consen 149 RGEIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGE-------N 221 (414)
T ss_pred cCceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcC-------c
Confidence 7789999999999999999999888 9999999999999999999998889999999999888776443221 1
Q ss_pred ccccccccccccCccCCCCC---------------------------CCCchhHHhhcCcHHHHHHhCCCC--cCccC-C
Q psy3706 315 IYNTLTNFTNLYNYQVPIAD---------------------------NTPNTLMVELFNTTTFRKAVHVGN--TTYDT-S 364 (443)
Q Consensus 315 ~f~~~tG~~n~yn~~~~~~d---------------------------P~~~~~~~~yLN~pdVrkALHV~~--~~w~~-~ 364 (443)
+....+...+.||++.. .. +.+.+.+.+++|.| ||++|++.+ ..|.. +
T Consensus 222 li~~~sn~VdfYNil~~-t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~~~~wGgqs 299 (414)
T KOG1283|consen 222 LISRESNGVDFYNILTK-TLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPGGVKWGGQS 299 (414)
T ss_pred ceeecccCcceeeeecc-CCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhccc-ccccccccCCCCcccCcC
Confidence 22222344566666542 11 12234577888877 899999964 46875 8
Q ss_pred hHHHHhhhcCCCCCChHHHHHHHhhh-ccCC---CCceeEecccch
Q psy3706 365 VTEDVFLKNDIMGSRQFPCITGLLSF-MKQG---PGVSVSCELSVS 406 (443)
Q Consensus 365 ~~V~~~l~~D~m~s~v~p~l~~LL~~-~rVl---Gd~D~~cn~~~~ 406 (443)
.+|...+..|+|++ +...+.+||++ +.|- |..|++|+..++
T Consensus 300 g~vFt~lq~dFMKP-vi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~ 344 (414)
T KOG1283|consen 300 GDVFTKLQGDFMKP-VISKVDELLNNGVNVTVYNGQLDLICATMGT 344 (414)
T ss_pred CchHHHhhhhhccc-HHHHHHHHHhCCceEEEEecccchhhcccch
Confidence 88999999999999 99999999984 6666 999999999653
No 8
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.8e-51 Score=412.53 Aligned_cols=246 Identities=19% Similarity=0.230 Sum_probs=178.7
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC-
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV- 236 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~- 236 (443)
.||||||||||||||||++++..++ +++++|+|++.||++||++||||+++||||+||||||||||+||++|+++|+.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~-~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT-GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 4899999999999999988765554 45556699999999999999999999999999999999999999999998863
Q ss_pred CcceeeeeeeEecCCccChhhHHH-HHHHHHhcCCCChhhHHHHHHHHHHHHHHHh--ccCHHHHHHHHHHhhhccCCCc
Q psy3706 237 TDIKINLKGFALGNDLTDPLYMML-YSKYLYQIGLIDDNGRKLFEYKEKQITDLIF--QKKLGEAFDVYDELIVGTFHDK 313 (443)
Q Consensus 237 ~~~~iNLkGi~IGNG~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~~~~~~~~~i~--~~~~~~a~~~~d~~l~g~~~~~ 313 (443)
.+++||||||+|||||+||..|.. +.+|+|.+||||+++++.+++.|..+...+. ...|.++...+... .+.....
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~-~~~~~~~ 158 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKC-TAKINIH 158 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHH-HhcCCHh
Confidence 456899999999999999999999 9999999999999999999988764322111 11122222221111 1101111
Q ss_pred cccccccccccccCccCCCCCCC---CchhHHhhcCcHHHHHHhCCCC---cCccCCh-HHHHhhhcCCCCCChHHHHHH
Q psy3706 314 TIYNTLTNFTNLYNYQVPIADNT---PNTLMVELFNTTTFRKAVHVGN---TTYDTSV-TEDVFLKNDIMGSRQFPCITG 386 (443)
Q Consensus 314 s~f~~~tG~~n~yn~~~~~~dP~---~~~~~~~yLN~pdVrkALHV~~---~~w~~~~-~V~~~l~~D~m~s~v~p~l~~ 386 (443)
.++. .+...++++. .+| +...+.+|||+++||+||||+. .+|..|+ .|. +..|++.+ +...++.
T Consensus 159 ~~~~---~~~~~~~~~~---~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~--~~~d~~~~-~~~~~~~ 229 (319)
T PLN02213 159 HILT---PDCDVTNVTS---PDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP--YNHDIVSS-IPYHMNN 229 (319)
T ss_pred hccc---CcccCccCCC---CCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc--cccccccc-hHHHHHH
Confidence 1110 0011122211 122 1346899999999999999973 4799854 454 66788766 5566666
Q ss_pred HhhhccCC---CCceeEecccchhhHHHHHHHH
Q psy3706 387 LLSFMKQG---PGVSVSCELSVSSFFSAVARMF 416 (443)
Q Consensus 387 LL~~~rVl---Gd~D~~cn~~~~~~~~~~~~~~ 416 (443)
|++++||| ||.|++|||++++. -+++|.
T Consensus 230 l~~~i~VliY~Gd~D~icn~~g~~~--wi~~L~ 260 (319)
T PLN02213 230 SISGYRSLIYSGDHDIAVPFLATQA--WIRSLN 260 (319)
T ss_pred HhcCceEEEEECCcCeeCCcHhHHH--HHHhcC
Confidence 66689999 99999999966543 444444
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.73 E-value=0.00022 Score=67.90 Aligned_cols=130 Identities=20% Similarity=0.227 Sum_probs=80.4
Q ss_pred EeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhc-cccccccceEEcCCCCCCCCcccccCcCcc
Q psy3706 77 YSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMT-GLFQENGPLQLNKNKKRQPLPYVEKRKTYW 155 (443)
Q Consensus 77 ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~-G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW 155 (443)
..+++++ +. ..+.|.-+.. +...|.||.+.||||+++.. ..+.+ . +..
T Consensus 3 ~~~~~~~----~~---~~~~~~~~~~---~~~~~~vl~~hG~~g~~~~~~~~~~~----------~------l~~----- 51 (288)
T TIGR01250 3 IEGIITV----DG---GYHLFTKTGG---EGEKIKLLLLHGGPGMSHEYLENLRE----------L------LKE----- 51 (288)
T ss_pred ccceecC----CC---CeEEEEeccC---CCCCCeEEEEcCCCCccHHHHHHHHH----------H------HHh-----
Confidence 4566666 32 3444443322 23467889999999998642 22211 0 111
Q ss_pred ccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCC
Q psy3706 156 SKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 156 ~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
+..+++-+|.| |.|.|.......-..+.++.++++..++.+ +..++++|.|+|+||..+..+|..-
T Consensus 52 -~g~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~----- 117 (288)
T TIGR01250 52 -EGREVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY----- 117 (288)
T ss_pred -cCCEEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC-----
Confidence 24778999988 999886432211123566777776655442 3345699999999999887777641
Q ss_pred CCcceeeeeeeEecCCccCh
Q psy3706 236 VTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~dp 255 (443)
+..++++++.++...+
T Consensus 118 ----p~~v~~lvl~~~~~~~ 133 (288)
T TIGR01250 118 ----GQHLKGLIISSMLDSA 133 (288)
T ss_pred ----ccccceeeEecccccc
Confidence 2357888888876543
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.67 E-value=0.00014 Score=68.35 Aligned_cols=116 Identities=19% Similarity=0.185 Sum_probs=77.1
Q ss_pred EEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccc
Q psy3706 96 FFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFA 175 (443)
Q Consensus 96 Ffwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~ 175 (443)
+|..+.. ..++.|+||++.|.+|.+..+..+.+ . + .+..+++-+|.| |.|.|-.
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~~~~~~~----------~------l-------~~~~~vi~~D~~-G~G~S~~ 55 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSYWAPQLD----------V------L-------TQRFHVVTYDHR-GTGRSPG 55 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhHHHHHHH----------H------H-------HhccEEEEEcCC-CCCCCCC
Confidence 4555433 22568999999998877655422111 0 2 134789999988 9998854
Q ss_pred cCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 176 EDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 176 ~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
..... .+.++.++++.+++... ...+++|.|+|+||..+..+|...- -.++++++-+++..+
T Consensus 56 ~~~~~--~~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~---------~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 56 ELPPG--YSIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYP---------ERLLSLVLINAWSRP 117 (257)
T ss_pred CCccc--CCHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHCh---------HHhHHheeecCCCCC
Confidence 33222 35677777777776532 3457999999999998888876421 147888888887654
No 11
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.55 E-value=0.0002 Score=73.61 Aligned_cols=132 Identities=17% Similarity=0.251 Sum_probs=85.0
Q ss_pred EEEEEeec--CCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEeccccccc
Q psy3706 95 LFFWFFPA--EEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGF 172 (443)
Q Consensus 95 lFfwffes--~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGf 172 (443)
-.||+.++ +.+|++||+||++.|| |.+.+.=|+.+.. -.+-+..-+...||.+|-.+-.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~-- 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS-- 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc--
Confidence 47999986 3468889999999999 8888888886521 1111122223499999966443
Q ss_pred ccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 173 SFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 173 Sy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
| ...+..|++ ++++.+..+-.+--+....++.+.|+|=||+-+-++..++.+.++.. .+ |..++-.||
T Consensus 167 ~-~~~~~~yPt-------QL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~---~P-k~~iLISPW 234 (374)
T PF10340_consen 167 S-DEHGHKYPT-------QLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLP---YP-KSAILISPW 234 (374)
T ss_pred c-ccCCCcCch-------HHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCC---CC-ceeEEECCC
Confidence 0 002222332 33333333332221234568999999999999999999987644322 22 688999999
Q ss_pred cChhh
Q psy3706 253 TDPLY 257 (443)
Q Consensus 253 ~dp~~ 257 (443)
+++..
T Consensus 235 v~l~~ 239 (374)
T PF10340_consen 235 VNLVP 239 (374)
T ss_pred cCCcC
Confidence 99974
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=97.19 E-value=0.0019 Score=62.73 Aligned_cols=125 Identities=12% Similarity=0.086 Sum_probs=80.1
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCcccc-CceeeEEecccc
Q psy3706 91 YSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSK-NHNVIYIDNPVG 169 (443)
Q Consensus 91 ~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~-~anllyiDqPvG 169 (443)
.+..|++..++.. +..+|+||.+.|..++|..+-.+.+ . +.+ -..++-+|.| |
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~---~--------------------l~~~g~~via~D~~-G 62 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAE---N--------------------ISSLGILVFSHDHI-G 62 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHH---H--------------------HHhCCCEEEEccCC-C
Confidence 3568999887764 3446899999998776654422211 1 112 3568999977 9
Q ss_pred cccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEec
Q psy3706 170 RGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALG 249 (443)
Q Consensus 170 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IG 249 (443)
.|.|-... ....+-.+..+|+.++|..+-+.++ ..+++|.|+|.||.-+..+|.+ . +-+++|+++.
T Consensus 63 ~G~S~~~~--~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~----~-----p~~i~~lil~ 128 (276)
T PHA02857 63 HGRSNGEK--MMIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYK----N-----PNLFTAMILM 128 (276)
T ss_pred CCCCCCcc--CCcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHh----C-----ccccceEEEe
Confidence 99884321 1122444556777777765544444 5689999999999755444432 1 1258999999
Q ss_pred CCccCh
Q psy3706 250 NDLTDP 255 (443)
Q Consensus 250 NG~~dp 255 (443)
++.+++
T Consensus 129 ~p~~~~ 134 (276)
T PHA02857 129 SPLVNA 134 (276)
T ss_pred cccccc
Confidence 987764
No 13
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.11 E-value=0.0033 Score=62.60 Aligned_cols=127 Identities=14% Similarity=0.216 Sum_probs=76.5
Q ss_pred eeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCcccc
Q psy3706 78 SGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSK 157 (443)
Q Consensus 78 sGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~ 157 (443)
.+|+++ .+ +..|+|+-. ..+. .|-||.+.||||.++.... -. . +. .+
T Consensus 6 ~~~~~~----~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~~~----~~-------~------~~------~~ 52 (306)
T TIGR01249 6 SGYLNV----SD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDPGC----RR-------F------FD------PE 52 (306)
T ss_pred CCeEEc----CC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCHHH----Hh-------c------cC------cc
Confidence 468887 33 567877553 2222 3457889999987542100 00 0 10 13
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCC
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVT 237 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~ 237 (443)
..+++-+|.| |.|.|..... .+..+.++.++++..+++ .+ ...++.+.|+|+||..+-.++.+-
T Consensus 53 ~~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~----~l---~~~~~~lvG~S~GG~ia~~~a~~~------- 116 (306)
T TIGR01249 53 TYRIVLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLRE----KL---GIKNWLVFGGSWGSTLALAYAQTH------- 116 (306)
T ss_pred CCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHH----Hc---CCCCEEEEEECHHHHHHHHHHHHC-------
Confidence 4789999988 9998863321 123345566666655443 22 235799999999998666665542
Q ss_pred cceeeeeeeEecCCccCh
Q psy3706 238 DIKINLKGFALGNDLTDP 255 (443)
Q Consensus 238 ~~~iNLkGi~IGNG~~dp 255 (443)
+-.++++++-+..+.+
T Consensus 117 --p~~v~~lvl~~~~~~~ 132 (306)
T TIGR01249 117 --PEVVTGLVLRGIFLLR 132 (306)
T ss_pred --hHhhhhheeeccccCC
Confidence 1246787777766543
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=96.96 E-value=0.0039 Score=59.74 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=72.3
Q ss_pred CCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccch
Q psy3706 106 PSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNK 185 (443)
Q Consensus 106 ~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~ 185 (443)
+.+.|+||++.|.+|.+..+..+.+ . +. +..+++.+|.| |-|.|-.... ...+.
T Consensus 25 ~~~~~~vv~~hG~~~~~~~~~~~~~----------~------l~-------~~~~vi~~D~~-G~G~S~~~~~--~~~~~ 78 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHSWRDLMP----------P------LA-------RSFRVVAPDLP-GHGFTRAPFR--FRFTL 78 (278)
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHH----------H------Hh-------hCcEEEeecCC-CCCCCCCccc--cCCCH
Confidence 4456999999999877665422111 0 21 23689999988 8998854322 12356
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChh
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~ 256 (443)
++.++++.+++++ +...+++|.|+|+||..+..+|..- +-.++++++.++..++.
T Consensus 79 ~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 79 PSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG---------PVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC---------CcccceEEEEcCccccc
Confidence 7778887777653 2345789999999998666665431 23478888888876643
No 15
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=96.95 E-value=0.0019 Score=58.63 Aligned_cols=105 Identities=19% Similarity=0.145 Sum_probs=70.8
Q ss_pred EEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHHHHH
Q psy3706 112 LLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLN 191 (443)
Q Consensus 112 vlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d 191 (443)
||.+.|++|.+..+..+.+ . +. +..+++.+|.| |.|.|-.... ....+.++.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------~------l~-------~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------A------LA-------RGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------H------HH-------TTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------H------Hh-------CCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6889999888755433221 0 21 45679999988 9998865442 123455666777
Q ss_pred HHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhh
Q psy3706 192 LYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLY 257 (443)
Q Consensus 192 ~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~ 257 (443)
+.++|++ .. ..+++|.|+|+||..+-.++.+. +-.++|+++-++......
T Consensus 56 l~~~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~vl~~~~~~~~~ 105 (228)
T PF12697_consen 56 LAELLDA----LG---IKKVILVGHSMGGMIALRLAARY---------PDRVKGLVLLSPPPPLPD 105 (228)
T ss_dssp HHHHHHH----TT---TSSEEEEEETHHHHHHHHHHHHS---------GGGEEEEEEESESSSHHH
T ss_pred hhhcccc----cc---ccccccccccccccccccccccc---------ccccccceeecccccccc
Confidence 7666643 22 26899999999999887777552 126899999999887543
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=96.93 E-value=0.0065 Score=60.99 Aligned_cols=140 Identities=18% Similarity=0.183 Sum_probs=85.5
Q ss_pred ceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcC
Q psy3706 74 IESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKT 153 (443)
Q Consensus 74 ~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~ 153 (443)
++.-.++++. . .+..|+|+-+.........|+||++.|..+.++ . -+.+ +. .
T Consensus 30 ~~~~~~~~~~----~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~-~~~~-----------------~~---~ 81 (330)
T PLN02298 30 IKGSKSFFTS----P--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-W-TFQS-----------------TA---I 81 (330)
T ss_pred CccccceEEc----C--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-e-ehhH-----------------HH---H
Confidence 3344667766 2 356788865543222235689999999843221 1 0100 00 0
Q ss_pred ccc-cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 154 YWS-KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 154 sW~-~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
.+. +-.+|+-+|.| |.|.|-.. .++..+.++.++|+..+++..-.. .++...+++|.|+|.||..+-.++.
T Consensus 82 ~L~~~Gy~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~---- 153 (330)
T PLN02298 82 FLAQMGFACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHL---- 153 (330)
T ss_pred HHHhCCCEEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHh----
Confidence 122 34789999999 99988422 234456778889998888755432 2233457999999999986544432
Q ss_pred cCCCCcceeeeeeeEecCCccC
Q psy3706 233 NNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 233 ~n~~~~~~iNLkGi~IGNG~~d 254 (443)
+.+ -.++|+++-+++.+
T Consensus 154 ~~p-----~~v~~lvl~~~~~~ 170 (330)
T PLN02298 154 ANP-----EGFDGAVLVAPMCK 170 (330)
T ss_pred cCc-----ccceeEEEeccccc
Confidence 221 24889998888764
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=96.89 E-value=0.0022 Score=61.07 Aligned_cols=104 Identities=16% Similarity=0.205 Sum_probs=73.1
Q ss_pred CCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCcccc
Q psy3706 104 EYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSR 183 (443)
Q Consensus 104 ~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~ 183 (443)
+.+.+.|.||++.|.+|.+.....+.+ . + .+..+++.+|.| |-|.|-... . .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~----------~------l-------~~~~~vi~~D~~-G~G~s~~~~--~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLAR----------D------L-------VNDHDIIQVDMR-NHGLSPRDP--V--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHH----------H------H-------hhCCeEEEECCC-CCCCCCCCC--C--C
Confidence 456778999999999888765432211 0 1 245789999998 888885322 2 3
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
+.++.++|+.++|.++ ...++.|.|+|.||..+..+|.+- +-.++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~---------~~~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALA---------PDRIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhC---------HhhcceEEEEec
Confidence 5677888999888753 335799999999999888777542 124777777653
No 18
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=96.85 E-value=0.0044 Score=60.89 Aligned_cols=105 Identities=18% Similarity=0.099 Sum_probs=72.4
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCc----cccc
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDL----YSRN 184 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~----~~~~ 184 (443)
.|.||.|.|.++.|.++-.+.+ . + .+.+.++.+|.| |.|.|-..+... ...+
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~----------~------L-------~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~ 84 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTP----------V------L-------AKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYT 84 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHH----------H------H-------HhCCeEEEEcCC-CCCCCCCCccccccccccCC
Confidence 3789999999998877643322 0 2 234589999988 999996443211 2335
Q ss_pred hhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 185 KTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 185 ~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
.++.|+++.++|.+. ...+++|.|+|.||..+-.+|.+- +-.++++++-|+..
T Consensus 85 ~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~---------p~~v~~lili~~~~ 137 (294)
T PLN02824 85 FETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDA---------PELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhC---------hhheeEEEEECCCc
Confidence 677777777777644 346899999999998776665532 12478888888754
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.83 E-value=0.0057 Score=62.14 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=78.6
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccc-cCceeeEEeccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWS-KNHNVIYIDNPVGR 170 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~-~~anllyiDqPvGt 170 (443)
+..||+..+...+ .+..|+||.+.|..+.++.. +.+..+ .+. +-.+++-+|.| |.
T Consensus 71 g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~--~~~~~~--------------------~l~~~g~~v~~~D~~-G~ 126 (349)
T PLN02385 71 GVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFF--FEGIAR--------------------KIASSGYGVFAMDYP-GF 126 (349)
T ss_pred CCEEEEEEEecCC-CCCCeEEEEECCCCCccchH--HHHHHH--------------------HHHhCCCEEEEecCC-CC
Confidence 5678876654332 24568999999976544321 011111 111 23678999998 89
Q ss_pred ccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecC
Q psy3706 171 GFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGN 250 (443)
Q Consensus 171 GfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGN 250 (443)
|.|-.. .++..+.++.++|+.++++.. ..-+++...+++|.|+|.||..+-.++.+ . +-.++|+++-+
T Consensus 127 G~S~~~--~~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~----~-----p~~v~glVLi~ 194 (349)
T PLN02385 127 GLSEGL--HGYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLK----Q-----PNAWDGAILVA 194 (349)
T ss_pred CCCCCC--CCCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHh----C-----cchhhheeEec
Confidence 988432 234456677888888777643 33344555689999999999765444332 1 12478888888
Q ss_pred CccC
Q psy3706 251 DLTD 254 (443)
Q Consensus 251 G~~d 254 (443)
+...
T Consensus 195 p~~~ 198 (349)
T PLN02385 195 PMCK 198 (349)
T ss_pred cccc
Confidence 7653
No 20
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=96.81 E-value=0.0026 Score=70.21 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=88.2
Q ss_pred CceEEEEEeecCC-CC-CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccc
Q psy3706 92 SSALFFWFFPAEE-YP-SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVG 169 (443)
Q Consensus 92 ~~~lFfwffes~~-~~-~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvG 169 (443)
+..+..|+....+ ++ ++-|+|+++.||| +++.| +....... .=+.+-+.||+++-.--
T Consensus 375 G~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~-------~~~~~~~q-----------~~~~~G~~V~~~n~RGS 434 (620)
T COG1506 375 GETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVG-------YSFNPEIQ-----------VLASAGYAVLAPNYRGS 434 (620)
T ss_pred CCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccc-------cccchhhH-----------HHhcCCeEEEEeCCCCC
Confidence 5578888887654 33 3359999999999 44444 11111111 11345678899985555
Q ss_pred cccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEec
Q psy3706 170 RGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALG 249 (443)
Q Consensus 170 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IG 249 (443)
+||+..=.+.....--....+|+.+++. |++..|..-...+.|+|.||||- ++..++.+. . -+|..+..
T Consensus 435 ~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGy----mtl~~~~~~-----~-~f~a~~~~ 503 (620)
T COG1506 435 TGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGY----MTLLAATKT-----P-RFKAAVAV 503 (620)
T ss_pred CccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHH----HHHHHHhcC-----c-hhheEEec
Confidence 5654321111111122346688889999 99999988777899999999994 455555432 2 57888888
Q ss_pred CCccChhhHHH
Q psy3706 250 NDLTDPLYMML 260 (443)
Q Consensus 250 NG~~dp~~q~~ 260 (443)
.|.+|....+.
T Consensus 504 ~~~~~~~~~~~ 514 (620)
T COG1506 504 AGGVDWLLYFG 514 (620)
T ss_pred cCcchhhhhcc
Confidence 88787766543
No 21
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=96.64 E-value=0.011 Score=61.69 Aligned_cols=127 Identities=18% Similarity=0.078 Sum_probs=83.8
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRG 171 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtG 171 (443)
+..+|++.++... .+..|+||++.|.++.+...-.+. +. +. .+-.+++-+|.| |-|
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a---~~-------------L~------~~Gy~V~~~D~r-GhG 175 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFA---KQ-------------LT------SCGFGVYAMDWI-GHG 175 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHH---HH-------------HH------HCCCEEEEeCCC-CCC
Confidence 4578888776643 334689999999877654321111 11 11 124578899988 888
Q ss_pred cccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 172 FSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 172 fSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
.|-.. .++..+.+..++|+..+++..-..+| ..+++|.|+|.||.-+-.++. + + +..-.++|+++.++
T Consensus 176 ~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~-p--~~~~~v~glVL~sP 243 (395)
T PLN02652 176 GSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----Y-P--SIEDKLEGIVLTSP 243 (395)
T ss_pred CCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----c-c--CcccccceEEEECc
Confidence 87432 34555677888898888887766665 347999999999986544332 1 1 11225889999888
Q ss_pred ccC
Q psy3706 252 LTD 254 (443)
Q Consensus 252 ~~d 254 (443)
+++
T Consensus 244 ~l~ 246 (395)
T PLN02652 244 ALR 246 (395)
T ss_pred ccc
Confidence 764
No 22
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=96.59 E-value=0.0084 Score=55.42 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=57.8
Q ss_pred CCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccch
Q psy3706 106 PSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNK 185 (443)
Q Consensus 106 ~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~ 185 (443)
+..+|+||.+.|-++.+..+..+.|. + .+..+++-+|.| |.|.|-... ...+.
T Consensus 10 ~~~~~~li~~hg~~~~~~~~~~~~~~----------------l-------~~~~~v~~~d~~-G~G~s~~~~---~~~~~ 62 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRMWDPVLPA----------------L-------TPDFRVLRYDKR-GHGLSDAPE---GPYSI 62 (251)
T ss_pred CCCCCeEEEEcCcccchhhHHHHHHH----------------h-------hcccEEEEecCC-CCCCCCCCC---CCCCH
Confidence 34679999998754443332211110 1 134688999988 889883221 22356
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHH
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFN 229 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~ 229 (443)
++.++++.++++.+ ...+++|.|+|+||..+-.+|..
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 77777777776543 33579999999999977766654
No 23
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.49 E-value=0.025 Score=55.94 Aligned_cols=131 Identities=17% Similarity=0.106 Sum_probs=79.1
Q ss_pred ceeEeeEEEeeccCCCCCCc--eEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccC
Q psy3706 74 IESYSGFFRVNSTEDKKYSS--ALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKR 151 (443)
Q Consensus 74 ~~~ysGyl~V~~~~~~~~~~--~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n 151 (443)
++.-=.|+.| +...+. .++|.- ..++ +.|.||.+.|.|+.+..+..+. |. |..
T Consensus 17 ~~~~~~~~~~----~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w~~~~---~~-------------L~~- 71 (302)
T PRK00870 17 YPFAPHYVDV----DDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLYRKMI---PI-------------LAA- 71 (302)
T ss_pred CCCCceeEee----cCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhHHHHH---HH-------------HHh-
Confidence 3444568889 542333 466543 2333 5688999999987776643221 21 111
Q ss_pred cCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHh
Q psy3706 152 KTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIY 231 (443)
Q Consensus 152 ~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~ 231 (443)
+..+++.+|.| |.|.|-.. +.....+.++.++++.++|++ +...++.|.|+|+||..+-.+|..-
T Consensus 72 -----~gy~vi~~Dl~-G~G~S~~~-~~~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~- 136 (302)
T PRK00870 72 -----AGHRVIAPDLI-GFGRSDKP-TRREDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAAEH- 136 (302)
T ss_pred -----CCCEEEEECCC-CCCCCCCC-CCcccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHHhC-
Confidence 24788999988 99988321 111122456666666655542 3346899999999999776666531
Q ss_pred hcCCCCcceeeeeeeEecCCc
Q psy3706 232 QNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 232 ~~n~~~~~~iNLkGi~IGNG~ 252 (443)
+ =.++++++-++.
T Consensus 137 ---p-----~~v~~lvl~~~~ 149 (302)
T PRK00870 137 ---P-----DRFARLVVANTG 149 (302)
T ss_pred ---h-----hheeEEEEeCCC
Confidence 1 237777777653
No 24
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=96.34 E-value=0.016 Score=60.48 Aligned_cols=109 Identities=16% Similarity=0.193 Sum_probs=67.0
Q ss_pred CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchh
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKT 186 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~ 186 (443)
.+.|.||.|.|.++.+..+... + .. + .+..+++-+|.| |.|-|-... ....+.+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~-------~---~~------L-------~~~~~vi~~D~r-G~G~S~~~~--~~~~~~~ 156 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRN-------F---DA------L-------ASRFRVIAIDQL-GWGGSSRPD--FTCKSTE 156 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHH-------H---HH------H-------HhCCEEEEECCC-CCCCCCCCC--cccccHH
Confidence 4679999999987765443211 0 00 2 134689999988 888873221 1112334
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
++.+.+.+.+..|.+.. ...+++|.|+|+||.-+-.+|.. . +-.++++++.++..
T Consensus 157 ~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~----~-----p~~v~~lvl~~p~~ 211 (402)
T PLN02894 157 ETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALK----H-----PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHh----C-----chhhcEEEEECCcc
Confidence 45555666666666533 34579999999999765555443 1 23578888877653
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=96.25 E-value=0.011 Score=55.91 Aligned_cols=100 Identities=23% Similarity=0.243 Sum_probs=66.5
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.||.+.|.+|.+..+-.+ .|. + +.++++-+|.| |-|.|-... ..+.++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~---~~~-------------l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPV---GEA-------------L--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHH---HHH-------------c--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 58899999999987655322 221 1 13678999987 999884322 1256667
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
++++.++|.. +...++++.|+|+||.-+-.+|.+. +. -.++++++.++.
T Consensus 53 ~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~----~~----~~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQG----LA----GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhC----Cc----ccccEEEEeCCC
Confidence 7777666653 3456899999999997766666642 11 126777776654
No 26
>PRK10749 lysophospholipase L2; Provisional
Probab=96.21 E-value=0.038 Score=55.79 Aligned_cols=125 Identities=15% Similarity=-0.032 Sum_probs=78.0
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRG 171 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtG 171 (443)
+..++|+.++.. ..+|+||.+.|-.+.+... .+..+.. . .+-.+++-+|.| |-|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y---~~~~~~l-------------~------~~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKY---AELAYDL-------------F------HLGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHH---HHHHHHH-------------H------HCCCeEEEEcCC-CCC
Confidence 457888887642 3457899999875433222 1111111 0 023578999988 999
Q ss_pred cccccCC---CccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEe
Q psy3706 172 FSFAEDY---DLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFAL 248 (443)
Q Consensus 172 fSy~~~~---~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~I 248 (443)
.|-.... .+...+-++.++|+..+++...+.++ ..++++.|+|.||..+-.++.. .+ -.++|+++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~----~p-----~~v~~lvl 161 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQR----HP-----GVFDAIAL 161 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHh----CC-----CCcceEEE
Confidence 8843211 12223567788888888876655443 5689999999999765444432 11 24689998
Q ss_pred cCCccC
Q psy3706 249 GNDLTD 254 (443)
Q Consensus 249 GNG~~d 254 (443)
.++...
T Consensus 162 ~~p~~~ 167 (330)
T PRK10749 162 CAPMFG 167 (330)
T ss_pred ECchhc
Confidence 887653
No 27
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=96.21 E-value=0.015 Score=53.55 Aligned_cols=105 Identities=20% Similarity=0.327 Sum_probs=64.2
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.||.+.|.+|.+..+-.+ .+. |. +..+++-+|.| |.|.|-... .....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~---~~~-------------L~-------~~~~v~~~d~~-g~G~s~~~~-~~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQAL---IEL-------------LG-------PHFRCLAIDLP-GHGSSQSPD-EIERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHH---HHH-------------hc-------ccCeEEEEcCC-CCCCCCCCC-ccChhhHHHH
Confidence 37899999988776543211 111 21 33688999987 888884321 1122344555
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
++++. ..+.+.+ ..++++|.|+|+||..+..+|.+. +-.++++++-++..
T Consensus 56 ~~~~~---~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~---------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 56 AQDIL---ATLLDQL---GIEPFFLVGYSMGGRIALYYALQY---------PERVQGLILESGSP 105 (251)
T ss_pred HHHHH---HHHHHHc---CCCeEEEEEeccHHHHHHHHHHhC---------chheeeeEEecCCC
Confidence 55522 2222333 356899999999999777777642 12478888877643
No 28
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=95.98 E-value=0.038 Score=53.79 Aligned_cols=117 Identities=16% Similarity=0.100 Sum_probs=74.1
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRG 171 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtG 171 (443)
+..+.||..+. . ...|.||+++|-++.+..+..+.+ . | .+..+++-+|.| |-|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~---~-------------L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE---A-------------L-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH---H-------------h-------ccCceEEEECCC-CCC
Confidence 34677877542 1 344678999986655554422111 0 2 145689999988 999
Q ss_pred cccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 172 FSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 172 fSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
.|-.. . ...+.++.++++.++|... .-.+++|.|+|+||..+-.+|.+ .+ -.++++++.|+
T Consensus 64 ~S~~~-~--~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~----~p-----~~v~~lvl~~~ 124 (276)
T TIGR02240 64 GSSTP-R--HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHD----YP-----ERCKKLILAAT 124 (276)
T ss_pred CCCCC-C--CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHH----CH-----HHhhheEEecc
Confidence 88422 1 1234566677766666542 33579999999999866555543 21 24899999887
Q ss_pred ccC
Q psy3706 252 LTD 254 (443)
Q Consensus 252 ~~d 254 (443)
...
T Consensus 125 ~~~ 127 (276)
T TIGR02240 125 AAG 127 (276)
T ss_pred CCc
Confidence 654
No 29
>PRK03204 haloalkane dehalogenase; Provisional
Probab=95.90 E-value=0.025 Score=55.81 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=62.0
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.||.|.|.|..+..+-.+. |. + .+..+++-+|.| |.|.|-... +...+.++.
T Consensus 34 ~~~iv~lHG~~~~~~~~~~~~---~~-------------l-------~~~~~vi~~D~~-G~G~S~~~~--~~~~~~~~~ 87 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYRDII---VA-------------L-------RDRFRCVAPDYL-GFGLSERPS--GFGYQIDEH 87 (286)
T ss_pred CCEEEEECCCCccHHHHHHHH---HH-------------H-------hCCcEEEEECCC-CCCCCCCCC--ccccCHHHH
Confidence 477888999875444432211 11 1 234789999988 888883222 222344555
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
++++..++++ +...+++|.|+|+||.-+ ..+.... +-.++++++.++..
T Consensus 88 ~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va----~~~a~~~-----p~~v~~lvl~~~~~ 136 (286)
T PRK03204 88 ARVIGEFVDH-------LGLDRYLSMGQDWGGPIS----MAVAVER-----ADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHH-------hCCCCEEEEEECccHHHH----HHHHHhC-----hhheeEEEEECccc
Confidence 5555555543 234579999999999743 3332211 23588888887754
No 30
>PRK03592 haloalkane dehalogenase; Provisional
Probab=95.90 E-value=0.028 Score=55.27 Aligned_cols=104 Identities=14% Similarity=0.086 Sum_probs=70.5
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.||.+.|.|+.+..+-.+.+ . | .+...++-+|.| |-|.|-... .. .+.++.
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~---~-------------L-------~~~~~via~D~~-G~G~S~~~~-~~--~~~~~~ 79 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIP---H-------------L-------AGLGRCLAPDLI-GMGASDKPD-ID--YTFADH 79 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHH---H-------------H-------hhCCEEEEEcCC-CCCCCCCCC-CC--CCHHHH
Confidence 4789999999988877632221 1 1 123478999988 999985332 22 256677
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
|+|+..++++. ...+++|.|+|.||..+-.+|.+. +=.++++++.|+...|
T Consensus 80 a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~---------p~~v~~lil~~~~~~~ 130 (295)
T PRK03592 80 ARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARH---------PDRVRGIAFMEAIVRP 130 (295)
T ss_pred HHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhC---------hhheeEEEEECCCCCC
Confidence 77777666542 346899999999998666555432 1247999999986554
No 31
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=95.88 E-value=0.034 Score=58.40 Aligned_cols=80 Identities=16% Similarity=0.118 Sum_probs=55.3
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCC
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVT 237 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~ 237 (443)
-.++|-+|.| |.|.|-... ...+ ...+...+..|+...|+....++.|.|.|+||.+++.+|..-
T Consensus 222 Gy~vl~~D~p-G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------- 286 (414)
T PRK05077 222 GIAMLTIDMP-SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------- 286 (414)
T ss_pred CCEEEEECCC-CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-------
Confidence 3788999999 999884321 1111 222334556677777877778899999999999998887541
Q ss_pred cceeeeeeeEecCCccC
Q psy3706 238 DIKINLKGFALGNDLTD 254 (443)
Q Consensus 238 ~~~iNLkGi~IGNG~~d 254 (443)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 124778888777765
No 32
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=95.52 E-value=0.11 Score=51.21 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=29.3
Q ss_pred cCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChh
Q psy3706 206 YQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 206 ~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~ 256 (443)
....+++|+|.|.||.-+-.++.+ .+ -.+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~----~p-----~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALK----NP-----DRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHh----Cc-----ccceEEEEECCccCcc
Confidence 445679999999999754444432 11 1367888889988764
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=95.07 E-value=0.084 Score=53.35 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=66.4
Q ss_pred CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchh
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKT 186 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~ 186 (443)
.+.|.||.++|.+|.+..+..+.+ . |. +..+++-+|.| |.|.|-... -..+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~----------~------l~-------~~~~v~~~d~~-g~G~s~~~~---~~~~~~ 181 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHA----------A------LA-------AGRPVIALDLP-GHGASSKAV---GAGSLD 181 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHH----------H------Hh-------cCCEEEEEcCC-CCCCCCCCC---CCCCHH
Confidence 456889999998887765433321 0 21 23678999988 889873221 234566
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
+.++++..++++ +...+++|.|+|+||..+..+|..- +-.++++++-++.
T Consensus 182 ~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------~~~v~~lv~~~~~ 231 (371)
T PRK14875 182 ELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARA---------PQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhC---------chheeEEEEECcC
Confidence 667666665543 3345799999999999888777641 1235666665543
No 34
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=94.86 E-value=0.11 Score=53.33 Aligned_cols=104 Identities=16% Similarity=0.026 Sum_probs=65.8
Q ss_pred CCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhH
Q psy3706 108 NAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQ 187 (443)
Q Consensus 108 ~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~ 187 (443)
+.|.||.|.|.++.+..+..+.+ . | .+...++-+|.| |-|.|-... +...+.++
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~---~-------------L-------~~~~~via~Dl~-G~G~S~~~~--~~~~~~~~ 140 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIG---V-------------L-------AKNYTVYAIDLL-GFGASDKPP--GFSYTMET 140 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH---H-------------H-------hcCCEEEEECCC-CCCCCCCCC--CccccHHH
Confidence 45788999999887766432221 1 1 134678999988 999884322 12335677
Q ss_pred HHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 188 VGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 188 ~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
.++++.++|... ...+++|.|+|.||..+-.++.. .. +-.++|+++.|+.
T Consensus 141 ~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~---~~-----P~rV~~LVLi~~~ 190 (360)
T PLN02679 141 WAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASE---ST-----RDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHh---cC-----hhhcCEEEEECCc
Confidence 788877777632 34589999999999543333321 11 1247888877764
No 35
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=94.85 E-value=0.12 Score=49.79 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=40.5
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHH
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFN 229 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~ 229 (443)
.++++-+|.| |.|.|-.... +.. .....++++.++++. +...++++.|+|+||..+-.+|.+
T Consensus 60 ~~~vi~~D~~-G~G~S~~~~~-~~~-~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 60 GYRVILKDSP-GFNKSDAVVM-DEQ-RGLVNARAVKGLMDA-------LDIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCEEEEECCC-CCCCCCCCcC-ccc-ccchhHHHHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHh
Confidence 4789999987 9998843211 111 111345555555443 345689999999999988777764
No 36
>PLN02442 S-formylglutathione hydrolase
Probab=94.83 E-value=0.19 Score=49.78 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChh
Q psy3706 188 VGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 188 ~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~ 256 (443)
..+++-..+..++.. +...+++|+|.|+||.-+-.++.+ .+ =.+++++..+|..||.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~----~p-----~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLK----NP-----DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHh----Cc-----hhEEEEEEECCccCcc
Confidence 445555555555543 345679999999999744333332 21 2368899999998865
No 37
>PRK10349 carboxylesterase BioH; Provisional
Probab=94.80 E-value=0.05 Score=52.13 Aligned_cols=94 Identities=12% Similarity=0.059 Sum_probs=61.4
Q ss_pred CEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHHH
Q psy3706 110 PVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVG 189 (443)
Q Consensus 110 PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a 189 (443)
|.||.|.|.++++..+-.+.+ .+.+...++.+|.| |.|.|-..+ . .+.++.+
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~-----------------------~L~~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~~ 65 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDE-----------------------ELSSHFTLHLVDLP-GFGRSRGFG--A--LSLADMA 65 (256)
T ss_pred CeEEEECCCCCChhHHHHHHH-----------------------HHhcCCEEEEecCC-CCCCCCCCC--C--CCHHHHH
Confidence 569999998877776522211 11255789999988 999885321 2 2445555
Q ss_pred HHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 190 LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 190 ~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
+++.+ +...++++.|+|+||.-+-.+|.. . +-.++++++-|+
T Consensus 66 ~~l~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~----~-----p~~v~~lili~~ 107 (256)
T PRK10349 66 EAVLQ-----------QAPDKAIWLGWSLGGLVASQIALT----H-----PERVQALVTVAS 107 (256)
T ss_pred HHHHh-----------cCCCCeEEEEECHHHHHHHHHHHh----C-----hHhhheEEEecC
Confidence 55442 223579999999999877766543 1 234678877665
No 38
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=94.79 E-value=0.17 Score=50.19 Aligned_cols=131 Identities=10% Similarity=0.019 Sum_probs=77.3
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchh-hccccccccceEEcCCCCCCCCcccccCcCccc-cCceeeEEecccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSS-MTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWS-KNHNVIYIDNPVG 169 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SS-l~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~-~~anllyiDqPvG 169 (443)
...+|.|+++.... ...|+||.++|-.+-.. ..-.+.... -.+. .-.+++-+|.| |
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la--------------------~~La~~Gy~Vl~~Dl~-G 66 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQA--------------------RAFAAGGFGVLQIDLY-G 66 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHH--------------------HHHHHCCCEEEEECCC-C
Confidence 35689999876543 33689999997422000 000000000 0111 34688999998 8
Q ss_pred cccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEec
Q psy3706 170 RGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALG 249 (443)
Q Consensus 170 tGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IG 249 (443)
.|.|-.... ..+.+...+|+..+++ |.+.. ...+++|.|+|.||..+-.+|... +-.++++++-
T Consensus 67 ~G~S~g~~~---~~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~---------p~~v~~lVL~ 130 (266)
T TIGR03101 67 CGDSAGDFA---AARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPL---------AAKCNRLVLW 130 (266)
T ss_pred CCCCCCccc---cCCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhC---------ccccceEEEe
Confidence 998853321 1234455566655443 44432 246899999999999877666432 1247888888
Q ss_pred CCccChhhHHH
Q psy3706 250 NDLTDPLYMML 260 (443)
Q Consensus 250 NG~~dp~~q~~ 260 (443)
++.++....+.
T Consensus 131 ~P~~~g~~~l~ 141 (266)
T TIGR03101 131 QPVVSGKQQLQ 141 (266)
T ss_pred ccccchHHHHH
Confidence 88887665443
No 39
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=94.64 E-value=0.11 Score=54.16 Aligned_cols=132 Identities=14% Similarity=0.053 Sum_probs=80.5
Q ss_pred CCceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccC
Q psy3706 72 FNIESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKR 151 (443)
Q Consensus 72 ~~~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n 151 (443)
++.++-+|+... .. +-.+||.- . .+...|.||.+.|.|+.+..+-.+.+ . |
T Consensus 100 ~~~~~~~~~~~~----~~--~~~~~y~~--~--G~~~~~~ivllHG~~~~~~~w~~~~~---~-------------L--- 150 (383)
T PLN03084 100 FGLKMGAQSQAS----SD--LFRWFCVE--S--GSNNNPPVLLIHGFPSQAYSYRKVLP---V-------------L--- 150 (383)
T ss_pred ccccccceeEEc----CC--ceEEEEEe--c--CCCCCCeEEEECCCCCCHHHHHHHHH---H-------------H---
Confidence 456666666654 21 23444332 2 23456899999999887655432211 0 2
Q ss_pred cCccccCceeeEEecccccccccccCCC-ccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHH
Q psy3706 152 KTYWSKNHNVIYIDNPVGRGFSFAEDYD-LYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNI 230 (443)
Q Consensus 152 ~~sW~~~anllyiDqPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I 230 (443)
.+...++-+|.| |.|.|-..... +...+.++.++++..++++. ...+++|.|+|+||.. |..+
T Consensus 151 ----~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~i----a~~~ 214 (383)
T PLN03084 151 ----SKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPP----VVKY 214 (383)
T ss_pred ----hcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHH----HHHH
Confidence 134688999988 99998543221 12336677788888777653 3357999999999954 3333
Q ss_pred hhcCCCCcceeeeeeeEecCCcc
Q psy3706 231 YQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 231 ~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
.... +-.++++++-|+..
T Consensus 215 a~~~-----P~~v~~lILi~~~~ 232 (383)
T PLN03084 215 ASAH-----PDKIKKLILLNPPL 232 (383)
T ss_pred HHhC-----hHhhcEEEEECCCC
Confidence 3221 23488888888754
No 40
>PRK10566 esterase; Provisional
Probab=94.56 E-value=0.14 Score=48.78 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=61.8
Q ss_pred eEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCcccc-CceeeEEeccccccc
Q psy3706 94 ALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSK-NHNVIYIDNPVGRGF 172 (443)
Q Consensus 94 ~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~-~anllyiDqPvGtGf 172 (443)
-.++-++++.......|+||.+.|++|.......+. . .+.+ -.+++.+|.| |.|-
T Consensus 12 ~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~-----------~------------~l~~~G~~v~~~d~~-g~G~ 67 (249)
T PRK10566 12 IEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFA-----------V------------ALAQAGFRVIMPDAP-MHGA 67 (249)
T ss_pred cceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHH-----------H------------HHHhCCCEEEEecCC-cccc
Confidence 345556665443456799999999987654321100 0 1112 3678889987 6665
Q ss_pred ccccCCCccc----cchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhH
Q psy3706 173 SFAEDYDLYS----RNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGF 228 (443)
Q Consensus 173 Sy~~~~~~~~----~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~ 228 (443)
|+........ ....+..+++..++ .++...+.....++.|+|+|+||..+-.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 68 RFSGDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred cCCCccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 5432211100 01123344544433 4444455455678999999999987766554
No 41
>KOG1515|consensus
Probab=94.49 E-value=0.29 Score=50.15 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=88.1
Q ss_pred CceEEEEEeecCCCC--CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccc-cCceeeEEeccc
Q psy3706 92 SSALFFWFFPAEEYP--SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWS-KNHNVIYIDNPV 168 (443)
Q Consensus 92 ~~~lFfwffes~~~~--~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~-~~anllyiDqPv 168 (443)
..+++-+.|.....+ ..+|+|||+.||=-|-+..-. | ...+-.+|. +..|.+- |
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~-----~--------------~y~~~~~~~a~~~~~vv----v 127 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANS-----P--------------AYDSFCTRLAAELNCVV----V 127 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCC-----c--------------hhHHHHHHHHHHcCeEE----E
Confidence 467999988876544 589999999999766332100 0 011111111 3344443 2
Q ss_pred ccccccccCCCccccchhHHHHHHHHHHHH-HHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeE
Q psy3706 169 GRGFSFAEDYDLYSRNKTQVGLNLYIALVQ-FFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFA 247 (443)
Q Consensus 169 GtGfSy~~~~~~~~~~~~~~a~d~~~fL~~-Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~ 247 (443)
.++|--+... .++..-++.-..+.-++++ |.+..-..+. ++|+|.|-||..+-.+|.++.+.. ..++.|||++
T Consensus 128 SVdYRLAPEh-~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r--v~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~i 201 (336)
T KOG1515|consen 128 SVDYRLAPEH-PFPAAYDDGWAALKWVLKNSWLKLGADPSR--VFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQI 201 (336)
T ss_pred ecCcccCCCC-CCCccchHHHHHHHHHHHhHHHHhCCCccc--EEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEE
Confidence 4555544332 4666666666666666666 7776665543 999999999999999999987632 2468899999
Q ss_pred ecCCccChh
Q psy3706 248 LGNDLTDPL 256 (443)
Q Consensus 248 IGNG~~dp~ 256 (443)
+--|++...
T Consensus 202 li~P~~~~~ 210 (336)
T KOG1515|consen 202 LIYPFFQGT 210 (336)
T ss_pred EEecccCCC
Confidence 888877543
No 42
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.48 E-value=0.047 Score=51.18 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=64.8
Q ss_pred ccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCC
Q psy3706 156 SKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 156 ~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
.+-..|+.+|.+.+.||+..-........-....+|+.++++..-+.. ..-...+.|+|.||||+-+-.++.. .
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~----~- 85 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ----H- 85 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH----T-
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc----c-
Confidence 355789999999999888654333333344567788888887766655 4556789999999999876665552 1
Q ss_pred CCcceeeeeeeEecCCccChhhHH
Q psy3706 236 VTDIKINLKGFALGNDLTDPLYMM 259 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~dp~~q~ 259 (443)
+-.++.++.++|.+|+....
T Consensus 86 ----~~~f~a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFSYY 105 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTCSB
T ss_pred ----ceeeeeeeccceecchhccc
Confidence 12478999999999987653
No 43
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=94.33 E-value=0.11 Score=47.90 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=52.6
Q ss_pred eeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcc
Q psy3706 160 NVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDI 239 (443)
Q Consensus 160 nllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~ 239 (443)
.|+-+|+| |.|+|... .-....+-..+++.+.+..+.+..+ ..++++.|.|+||..+-.+|.. .+
T Consensus 2 ~vi~~d~r-G~g~S~~~---~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~----~p---- 66 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPH---WDPDFPDYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQ----YP---- 66 (230)
T ss_dssp EEEEEECT-TSTTSSSC---CGSGSCTHCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHH----SG----
T ss_pred EEEEEeCC-CCCCCCCC---ccCCcccccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHH----Cc----
Confidence 57888977 99999731 0112344456666677777777666 3449999999999866555543 11
Q ss_pred eeeeeeeEecCCcc
Q psy3706 240 KINLKGFALGNDLT 253 (443)
Q Consensus 240 ~iNLkGi~IGNG~~ 253 (443)
-.++++++-++..
T Consensus 67 -~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 67 -ERVKKLVLISPPP 79 (230)
T ss_dssp -GGEEEEEEESESS
T ss_pred -hhhcCcEEEeeec
Confidence 2788888887763
No 44
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=94.32 E-value=0.15 Score=46.11 Aligned_cols=104 Identities=19% Similarity=0.149 Sum_probs=60.5
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.++++.|+|+++.......+. +..... + .+++.+|+| |.|.|. .. .......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~----------------~~~~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV----------------LPALAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH----------------hhcccc---c-eEEEEeccc-CCCCCC-cc----cccHHHH
Confidence 66999999999988765431000 111111 1 789999999 999996 11 1112222
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
++++..++ +. +...++.+.|+|+||...-.++...- -.++++++-++...
T Consensus 75 ~~~~~~~~----~~---~~~~~~~l~G~S~Gg~~~~~~~~~~p---------~~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALL----DA---LGLEKVVLVGHSMGGAVALALALRHP---------DRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHH----HH---hCCCceEEEEecccHHHHHHHHHhcc---------hhhheeeEecCCCC
Confidence 44444443 32 23334999999999765544444321 14666666665544
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=94.32 E-value=0.084 Score=48.59 Aligned_cols=96 Identities=9% Similarity=0.034 Sum_probs=58.6
Q ss_pred CCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchhHH
Q psy3706 109 APVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQV 188 (443)
Q Consensus 109 ~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~ 188 (443)
.|.||.+.|.++.+..+-.+.+ . +. +..+++.+|.| |-|.|-... ..+.++.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~----------~------l~-------~~~~vi~~d~~-G~G~s~~~~----~~~~~~~ 55 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE----------E------LS-------AHFTLHLVDLP-GHGRSRGFG----PLSLADA 55 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH----------h------hc-------cCeEEEEecCC-cCccCCCCC----CcCHHHH
Confidence 4789999987665544321111 0 21 24789999988 888874321 1244555
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
++++.+.+ ..++++.|+|+||..+..+|.+-- -.++++++.++.
T Consensus 56 ~~~~~~~~-----------~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~~il~~~~ 99 (245)
T TIGR01738 56 AEAIAAQA-----------PDPAIWLGWSLGGLVALHIAATHP---------DRVRALVTVASS 99 (245)
T ss_pred HHHHHHhC-----------CCCeEEEEEcHHHHHHHHHHHHCH---------HhhheeeEecCC
Confidence 55544321 258999999999987766665321 136777776654
No 46
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=94.27 E-value=0.23 Score=53.26 Aligned_cols=133 Identities=13% Similarity=0.076 Sum_probs=77.9
Q ss_pred eeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCc
Q psy3706 75 ESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTY 154 (443)
Q Consensus 75 ~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~s 154 (443)
+.-.-|++. + +..||++.....+. ...|.||++.|.+|.+.++.-.. =|. +.. .
T Consensus 175 ~~~~~~~~~----~---~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~~W~~~~--~~~-------------L~~---~ 228 (481)
T PLN03087 175 KFCTSWLSS----S---NESLFVHVQQPKDN-KAKEDVLFIHGFISSSAFWTETL--FPN-------------FSD---A 228 (481)
T ss_pred ceeeeeEee----C---CeEEEEEEecCCCC-CCCCeEEEECCCCccHHHHHHHH--HHH-------------HHH---H
Confidence 344467766 3 25788887665432 23477999999998876643100 000 111 1
Q ss_pred cccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcC
Q psy3706 155 WSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNN 234 (443)
Q Consensus 155 W~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n 234 (443)
+.+...++-+|.| |-|-|-...+ ...+.++.++++. +.+.+. +...+++|.|+|.||..+-.+|.+-
T Consensus 229 ~~~~yrVia~Dl~-G~G~S~~p~~--~~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~---- 295 (481)
T PLN03087 229 AKSTYRLFAVDLL-GFGRSPKPAD--SLYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKH---- 295 (481)
T ss_pred hhCCCEEEEECCC-CCCCCcCCCC--CcCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhC----
Confidence 2345678999988 8887742221 1124455555543 123332 3356899999999999776666531
Q ss_pred CCCcceeeeeeeEecCC
Q psy3706 235 PVTDIKINLKGFALGND 251 (443)
Q Consensus 235 ~~~~~~iNLkGi~IGNG 251 (443)
+ =.++++++.++
T Consensus 296 P-----e~V~~LVLi~~ 307 (481)
T PLN03087 296 P-----GAVKSLTLLAP 307 (481)
T ss_pred h-----HhccEEEEECC
Confidence 1 13677777765
No 47
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=94.21 E-value=0.17 Score=47.62 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhh
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLG 227 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la 227 (443)
..++.+++....+.++ ....+++|+|.|.||..+-.++
T Consensus 76 ~~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 76 VESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHH
Confidence 3344444444444443 3445799999999998544443
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=94.19 E-value=0.16 Score=54.51 Aligned_cols=96 Identities=8% Similarity=0.050 Sum_probs=63.9
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRG 171 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtG 171 (443)
+..|.|+-+. +.+.|.||.+.|.++.+..+.-+.+ . + .+...++-+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~----------~------L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAP----------L------L-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHH----------H------h-------hcceEEEEecCC-CCC
Confidence 4567776542 2357899999999877655432211 0 2 133678999988 999
Q ss_pred cccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEeccccccc
Q psy3706 172 FSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQF 222 (443)
Q Consensus 172 fSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~y 222 (443)
.|...... ...+.++.++|+..+++..- ...+++|.|+|+||..
T Consensus 64 ~S~~~~~~-~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 64 RSSAPKRT-AAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQ 107 (582)
T ss_pred CCCCCCcc-cccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHH
Confidence 99643321 23357888889888887531 1346999999999944
No 49
>PRK10115 protease 2; Provisional
Probab=93.82 E-value=0.23 Score=55.59 Aligned_cols=137 Identities=12% Similarity=-0.046 Sum_probs=75.4
Q ss_pred CceEEEEEeecCC--CCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccc
Q psy3706 92 SSALFFWFFPAEE--YPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVG 169 (443)
Q Consensus 92 ~~~lFfwffes~~--~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvG 169 (443)
+..+-.|++-... .....|+||+..||||.|...++..+.. +|...-=++.+=++=|
T Consensus 426 G~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~---------------------~l~~rG~~v~~~n~RG 484 (686)
T PRK10115 426 GVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRL---------------------SLLDRGFVYAIVHVRG 484 (686)
T ss_pred CCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHH---------------------HHHHCCcEEEEEEcCC
Confidence 3445544443221 2355699999999999986554433332 2222222344444444
Q ss_pred c-ccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEe
Q psy3706 170 R-GFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFAL 248 (443)
Q Consensus 170 t-GfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~I 248 (443)
. ||--.=...+.-..-...-+|+..+.+...+. .--....+.|.|-||||- ++..++.+. +=-+++++.
T Consensus 485 s~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~----l~~~~~~~~-----Pdlf~A~v~ 554 (686)
T PRK10115 485 GGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGM----LMGVAINQR-----PELFHGVIA 554 (686)
T ss_pred CCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHH----HHHHHHhcC-----hhheeEEEe
Confidence 3 33311111111111124456776666544433 333445799999999997 333333322 125899999
Q ss_pred cCCccChhhHH
Q psy3706 249 GNDLTDPLYMM 259 (443)
Q Consensus 249 GNG~~dp~~q~ 259 (443)
+.|++|....+
T Consensus 555 ~vp~~D~~~~~ 565 (686)
T PRK10115 555 QVPFVDVVTTM 565 (686)
T ss_pred cCCchhHhhhc
Confidence 99999988653
No 50
>KOG4409|consensus
Probab=93.73 E-value=0.18 Score=51.52 Aligned_cols=84 Identities=20% Similarity=0.238 Sum_probs=58.8
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV 236 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~ 236 (443)
+..||-.||.| |-|.|-... +..+.+.+-+.+.+-+++|....- -.+.+|.|+|+||-.....|.+ .+
T Consensus 115 ~~~~vyaiDll-G~G~SSRP~---F~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlK----yP- 182 (365)
T KOG4409|consen 115 KIRNVYAIDLL-GFGRSSRPK---FSIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALK----YP- 182 (365)
T ss_pred hcCceEEeccc-CCCCCCCCC---CCCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHh----Ch-
Confidence 47789999988 999985433 555555555689999999998654 3489999999999543333322 22
Q ss_pred CcceeeeeeeEecCCccChh
Q psy3706 237 TDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 237 ~~~~iNLkGi~IGNG~~dp~ 256 (443)
=.++-+++-+||--|+
T Consensus 183 ----erV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 183 ----ERVEKLILVSPWGFPE 198 (365)
T ss_pred ----HhhceEEEeccccccc
Confidence 2367778888876655
No 51
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=93.71 E-value=0.48 Score=47.96 Aligned_cols=76 Identities=9% Similarity=0.026 Sum_probs=49.6
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCC-CcEEEEecccccccchhhhHHHhhcCC
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQR-NDFFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~-~~~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
+.+.++.+|.| |-|=|. ... .+.++.|+|+.++|+.. .- +.+.|.|.|+||..+-.+|.+-
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~---~~~--~~~~~~a~dl~~ll~~l-------~l~~~~~lvG~SmGG~vA~~~A~~~----- 159 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL---DVP--IDTADQADAIALLLDAL-------GIARLHAFVGYSYGALVGLQFASRH----- 159 (343)
T ss_pred cccEEEEEeCC-CCCCCC---CCC--CCHHHHHHHHHHHHHHc-------CCCcceEEEEECHHHHHHHHHHHHC-----
Confidence 45789999999 655442 112 24456788887776542 23 3467999999998666666542
Q ss_pred CCcceeeeeeeEecCCccC
Q psy3706 236 VTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~d 254 (443)
+=.++++++.++...
T Consensus 160 ----P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 160 ----PARVRTLVVVSGAHR 174 (343)
T ss_pred ----hHhhheEEEECcccc
Confidence 124788888877543
No 52
>PLN02511 hydrolase
Probab=93.68 E-value=0.48 Score=49.21 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=65.0
Q ss_pred CceEEEEEeec--CCCCCCCCEEEEecCCCCchhh-c--cccccccceEEcCCCCCCCCcccccCcCccccCceeeEEec
Q psy3706 92 SSALFFWFFPA--EEYPSNAPVLLWLNAGLGSSSM-T--GLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDN 166 (443)
Q Consensus 92 ~~~lFfwffes--~~~~~~~PlvlWlnGGPG~SSl-~--G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDq 166 (443)
+..+..+.+.. ...+.++|+||.|.|..|+|.. . .+..+ + ..+-.+++-+|.
T Consensus 81 G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~-----------------~------~~~g~~vv~~d~ 137 (388)
T PLN02511 81 GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLR-----------------A------RSKGWRVVVFNS 137 (388)
T ss_pred CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHH-----------------H------HHCCCEEEEEec
Confidence 34555533332 2345678999999999998642 1 11100 0 013457888998
Q ss_pred ccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhh
Q psy3706 167 PVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLG 227 (443)
Q Consensus 167 PvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la 227 (443)
| |.|-|-......+ ....++|+.++++..-..+| ..++++.|+|.||.-+-.++
T Consensus 138 r-G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 138 R-GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred C-CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 7 7887743222112 23456677777777666676 46899999999998644333
No 53
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=93.27 E-value=0.22 Score=48.98 Aligned_cols=106 Identities=14% Similarity=0.058 Sum_probs=64.1
Q ss_pred CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccchh
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKT 186 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~ 186 (443)
.+.|.||++.|..+.++.+..+. +. |.. +-.+++-+|.| |.|-|.... ....+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~---~~-------------L~~------~g~~vi~~dl~-g~G~s~~~~--~~~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIR---CL-------------MEN------SGYKVTCIDLK-SAGIDQSDA--DSVTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHH---HH-------------HHh------CCCEEEEeccc-CCCCCCCCc--ccCCCHH
Confidence 66799999999766554432211 00 111 23578999998 888763222 1124566
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCc
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDL 252 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~ 252 (443)
+.++++.++|++ .. ...+++|.|+||||..+-.++... + -.++++++-++.
T Consensus 71 ~~~~~l~~~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~----p-----~~v~~lv~~~~~ 121 (273)
T PLN02211 71 EYNKPLIDFLSS----LP--ENEKVILVGHSAGGLSVTQAIHRF----P-----KKICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHHHHh----cC--CCCCEEEEEECchHHHHHHHHHhC----h-----hheeEEEEeccc
Confidence 666666666543 22 146899999999999666665432 1 135666666554
No 54
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=93.27 E-value=0.21 Score=50.64 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=62.8
Q ss_pred cCceeeEEecccccccccccCC-CccccchhHHHHHHHHHHHHHHHHcc----------------ccC-CCcEEEEeccc
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDY-DLYSRNKTQVGLNLYIALVQFFKVFN----------------EYQ-RNDFFITGETY 218 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~-~~~~~~~~~~a~d~~~fL~~Ff~~fp----------------e~~-~~~~yi~GESY 218 (443)
+-..++-+|.| |.|-|-.... .++..+-++.++|+..+++..-+..+ ++. ..|+||.|+|.
T Consensus 73 ~G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSm 151 (332)
T TIGR01607 73 NGYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSM 151 (332)
T ss_pred CCCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccC
Confidence 45789999987 9999865432 34445778888999998886644100 222 56899999999
Q ss_pred ccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 219 IGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 219 aG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
||.-+-.++...-+. ..-.-+..++|+++-.|.+.
T Consensus 152 Gg~i~~~~~~~~~~~-~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 152 GGNIALRLLELLGKS-NENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccHHHHHHHHHhccc-cccccccccceEEEeccceE
Confidence 998766555443211 00011246889887777653
No 55
>PLN02965 Probable pheophorbidase
Probab=93.01 E-value=0.26 Score=47.34 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=51.4
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCC
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVT 237 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~ 237 (443)
...++-+|.| |.|.|-... ....+.++.|+|+.++|.+ .. ..+++++.|+|+||..+..+|... +
T Consensus 30 ~~~via~Dl~-G~G~S~~~~--~~~~~~~~~a~dl~~~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~----p-- 94 (255)
T PLN02965 30 GFKSTCVDLT-GAGISLTDS--NTVSSSDQYNRPLFALLSD----LP--PDHKVILVGHSIGGGSVTEALCKF----T-- 94 (255)
T ss_pred CceEEEecCC-cCCCCCCCc--cccCCHHHHHHHHHHHHHh----cC--CCCCEEEEecCcchHHHHHHHHhC----c--
Confidence 3578999988 999884322 1233567778887777753 22 125899999999998777776532 1
Q ss_pred cceeeeeeeEecCCc
Q psy3706 238 DIKINLKGFALGNDL 252 (443)
Q Consensus 238 ~~~iNLkGi~IGNG~ 252 (443)
=.++++++-|+.
T Consensus 95 ---~~v~~lvl~~~~ 106 (255)
T PLN02965 95 ---DKISMAIYVAAA 106 (255)
T ss_pred ---hheeEEEEEccc
Confidence 135677776654
No 56
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=92.95 E-value=0.3 Score=59.97 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=67.9
Q ss_pred CCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCC-----Cc
Q psy3706 106 PSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDY-----DL 180 (443)
Q Consensus 106 ~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~-----~~ 180 (443)
.++.|.||+|+|.+|.+..+-.+.+ . +. +..+++.+|.| |-|.|-.... ..
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~~----------~------L~-------~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~ 1423 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIMK----------A------IS-------GSARCISIDLP-GHGGSKIQNHAKETQTE 1423 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHH----------H------Hh-------CCCEEEEEcCC-CCCCCCCcccccccccc
Confidence 4567899999999998876422211 0 21 33688999988 8888753221 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 181 YSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 181 ~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
...+.++.++++..++++ +...+++|.|+|+||..+-.+|.+- +-.++++++-+|
T Consensus 1424 ~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~---------P~~V~~lVlis~ 1478 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRF---------SDKIEGAVIISG 1478 (1655)
T ss_pred ccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhC---------hHhhCEEEEECC
Confidence 223566777777766653 3446899999999998666665431 123667766554
No 57
>PRK07581 hypothetical protein; Validated
Probab=92.38 E-value=0.48 Score=47.67 Aligned_cols=128 Identities=9% Similarity=0.020 Sum_probs=65.9
Q ss_pred ceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEeccccccc
Q psy3706 93 SALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGF 172 (443)
Q Consensus 93 ~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGf 172 (443)
..++|--+.. ..+...|+||.+.|++|.+.+.......||. +. .+...+|-+|.| |.|.
T Consensus 26 ~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~-------------l~------~~~~~vi~~D~~-G~G~ 84 (339)
T PRK07581 26 ARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDNEWLIGPGRA-------------LD------PEKYFIIIPNMF-GNGL 84 (339)
T ss_pred ceEEEEecCc-cCCCCCCEEEEeCCCCCCcccchhhccCCCc-------------cC------cCceEEEEecCC-CCCC
Confidence 4566544322 1234568888876555544442111111111 11 135778999999 9998
Q ss_pred ccccCCC--ccccc---hhHHHHHHHHHHHHHHHHccccCCCc-EEEEecccccccchhhhHHHhhcCCCCcceeeeeee
Q psy3706 173 SFAEDYD--LYSRN---KTQVGLNLYIALVQFFKVFNEYQRND-FFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGF 246 (443)
Q Consensus 173 Sy~~~~~--~~~~~---~~~~a~d~~~fL~~Ff~~fpe~~~~~-~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi 246 (443)
|-..... .|... ....++++........+. +.-.+ ..|.|.|+||..+-.+|..-= =.++++
T Consensus 85 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P---------~~V~~L 152 (339)
T PRK07581 85 SSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYP---------DMVERA 152 (339)
T ss_pred CCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCH---------HHHhhh
Confidence 8533211 11111 112444444322222221 33456 578999999987777766421 236666
Q ss_pred EecCCcc
Q psy3706 247 ALGNDLT 253 (443)
Q Consensus 247 ~IGNG~~ 253 (443)
++.++..
T Consensus 153 vli~~~~ 159 (339)
T PRK07581 153 APIAGTA 159 (339)
T ss_pred eeeecCC
Confidence 6665543
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=92.21 E-value=0.63 Score=46.71 Aligned_cols=129 Identities=13% Similarity=0.029 Sum_probs=89.2
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEeccccc
Q psy3706 91 YSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGR 170 (443)
Q Consensus 91 ~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGt 170 (443)
.+..++|+-+++.+++. -+|++++|.=..+.-.--+. .+ +.. .-..++=+|+| |.
T Consensus 18 d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la--------~~--------l~~------~G~~V~~~D~R-Gh 72 (298)
T COG2267 18 DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELA--------DD--------LAA------RGFDVYALDLR-GH 72 (298)
T ss_pred CCceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHH--------HH--------HHh------CCCEEEEecCC-CC
Confidence 46789999998876555 89999998755543321111 00 111 23457789999 99
Q ss_pred ccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecC
Q psy3706 171 GFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGN 250 (443)
Q Consensus 171 GfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGN 250 (443)
|-|.. ...+...+-.+...|+-.+++..-+..| ..++||.|+|-||-.+...+..- .-.++|+++-+
T Consensus 73 G~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~---------~~~i~~~vLss 139 (298)
T COG2267 73 GRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARY---------PPRIDGLVLSS 139 (298)
T ss_pred CCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhC---------CccccEEEEEC
Confidence 99963 3445666677777777777776665544 67999999999997655444432 14789999999
Q ss_pred CccChhh
Q psy3706 251 DLTDPLY 257 (443)
Q Consensus 251 G~~dp~~ 257 (443)
|++.+..
T Consensus 140 P~~~l~~ 146 (298)
T COG2267 140 PALGLGG 146 (298)
T ss_pred ccccCCh
Confidence 9998873
No 59
>PLN02578 hydrolase
Probab=91.82 E-value=0.32 Score=49.62 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=52.3
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV 236 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~ 236 (443)
+...++-+|.| |.|.|-... ...+.+..++++.+|+++.. ..+++|.|+|+||..+-.+|.+-
T Consensus 111 ~~~~v~~~D~~-G~G~S~~~~---~~~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~------ 173 (354)
T PLN02578 111 KKYKVYALDLL-GFGWSDKAL---IEYDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGY------ 173 (354)
T ss_pred cCCEEEEECCC-CCCCCCCcc---cccCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhC------
Confidence 34789999999 888874321 12255666777777776542 46899999999998666555542
Q ss_pred CcceeeeeeeEecCCc
Q psy3706 237 TDIKINLKGFALGNDL 252 (443)
Q Consensus 237 ~~~~iNLkGi~IGNG~ 252 (443)
+-.++++++.|+.
T Consensus 174 ---p~~v~~lvLv~~~ 186 (354)
T PLN02578 174 ---PELVAGVALLNSA 186 (354)
T ss_pred ---hHhcceEEEECCC
Confidence 2357888887763
No 60
>PRK06489 hypothetical protein; Provisional
Probab=90.88 E-value=0.76 Score=46.91 Aligned_cols=128 Identities=13% Similarity=0.016 Sum_probs=67.9
Q ss_pred ceEEEEEeecCC---CCCCCCEEEEecCCCCchhhcc--ccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecc
Q psy3706 93 SALFFWFFPAEE---YPSNAPVLLWLNAGLGSSSMTG--LFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNP 167 (443)
Q Consensus 93 ~~lFfwffes~~---~~~~~PlvlWlnGGPG~SSl~G--~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqP 167 (443)
..++|.-+.... ++++.|.||.+.|++|.+..+- .+. +..+.. .. . --.+...++.+|.|
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~---~~l~~~-~~-------~----l~~~~~~Via~Dl~ 114 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFA---GELFGP-GQ-------P----LDASKYFIILPDGI 114 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhH---HHhcCC-CC-------c----ccccCCEEEEeCCC
Confidence 456665442210 1233688999999998765431 110 000000 00 0 00245789999999
Q ss_pred cccccccccCCCcc-----ccchhHHHHHHHHHHHHHHHHccccCCCcE-EEEecccccccchhhhHHHhhcCCCCccee
Q psy3706 168 VGRGFSFAEDYDLY-----SRNKTQVGLNLYIALVQFFKVFNEYQRNDF-FITGETYIGQFGTSLGFNIYQNNPVTDIKI 241 (443)
Q Consensus 168 vGtGfSy~~~~~~~-----~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~-yi~GESYaG~yvP~la~~I~~~n~~~~~~i 241 (443)
|.|.|-...+ .+ ..+.++.++++..++.+- +.-.++ +|.|.|.||..+-.+|.+- + =
T Consensus 115 -GhG~S~~p~~-~~~~~~~~~~~~~~a~~~~~~l~~~------lgi~~~~~lvG~SmGG~vAl~~A~~~----P-----~ 177 (360)
T PRK06489 115 -GHGKSSKPSD-GLRAAFPRYDYDDMVEAQYRLVTEG------LGVKHLRLILGTSMGGMHAWMWGEKY----P-----D 177 (360)
T ss_pred -CCCCCCCCCc-CCCCCCCcccHHHHHHHHHHHHHHh------cCCCceeEEEEECHHHHHHHHHHHhC----c-----h
Confidence 9998843221 11 124456666655544221 222356 4899999997655555431 1 2
Q ss_pred eeeeeEecCCc
Q psy3706 242 NLKGFALGNDL 252 (443)
Q Consensus 242 NLkGi~IGNG~ 252 (443)
.++++++-++.
T Consensus 178 ~V~~LVLi~s~ 188 (360)
T PRK06489 178 FMDALMPMASQ 188 (360)
T ss_pred hhheeeeeccC
Confidence 36677765553
No 61
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.85 E-value=1.3 Score=43.92 Aligned_cols=82 Identities=16% Similarity=0.116 Sum_probs=52.6
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV 236 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~ 236 (443)
...|++.+|.+.+..-.|.. -..+...+++++-.+|+...+... +...+++|.|+|.||+-+-.+|.+.-+
T Consensus 65 ~~~nVi~vD~~~~~~~~y~~----a~~~~~~v~~~la~~l~~L~~~~g-~~~~~i~lIGhSlGa~vAg~~a~~~~~---- 135 (275)
T cd00707 65 GDYNVIVVDWGRGANPNYPQ----AVNNTRVVGAELAKFLDFLVDNTG-LSLENVHLIGHSLGAHVAGFAGKRLNG---- 135 (275)
T ss_pred CCCEEEEEECccccccChHH----HHHhHHHHHHHHHHHHHHHHHhcC-CChHHEEEEEecHHHHHHHHHHHHhcC----
Confidence 45899999988552211211 123456677777777777665431 334689999999999987777765421
Q ss_pred CcceeeeeeeEecCCc
Q psy3706 237 TDIKINLKGFALGNDL 252 (443)
Q Consensus 237 ~~~~iNLkGi~IGNG~ 252 (443)
.++.|+.-++.
T Consensus 136 -----~v~~iv~LDPa 146 (275)
T cd00707 136 -----KLGRITGLDPA 146 (275)
T ss_pred -----ccceeEEecCC
Confidence 46677665543
No 62
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=90.84 E-value=0.18 Score=52.76 Aligned_cols=80 Identities=16% Similarity=0.094 Sum_probs=53.0
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV 236 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~ 236 (443)
+-.+||=||-| |||+|.... +. +....+++.+-.|....|+.-...+-++|-|+||.|++.+|+.=.
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~----- 283 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LT----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED----- 283 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-----
T ss_pred CCCEEEEEccC-CCcccccCC---CC----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc-----
Confidence 34578999999 999984221 21 123457778888888899998889999999999999999987421
Q ss_pred CcceeeeeeeEecCCcc
Q psy3706 237 TDIKINLKGFALGNDLT 253 (443)
Q Consensus 237 ~~~~iNLkGi~IGNG~~ 253 (443)
-.|||++.-.|.+
T Consensus 284 ----~RlkavV~~Ga~v 296 (411)
T PF06500_consen 284 ----PRLKAVVALGAPV 296 (411)
T ss_dssp ----TT-SEEEEES---
T ss_pred ----cceeeEeeeCchH
Confidence 2467755444443
No 63
>KOG1455|consensus
Probab=90.81 E-value=1.9 Score=43.44 Aligned_cols=124 Identities=18% Similarity=0.089 Sum_probs=83.3
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEecCCCCchhh-c----cccccccceEEcCCCCCCCCcccccCcCccccCceeeEEe
Q psy3706 91 YSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSM-T----GLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYID 165 (443)
Q Consensus 91 ~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl-~----G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiD 165 (443)
.+..||.-....+..++-.-+|+.+.|.=+-||- + ..|...| .-+--+|
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g--------------------------~~v~a~D 89 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSG--------------------------FAVYAID 89 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCC--------------------------CeEEEee
Confidence 4668998777666656777788888886554432 1 2222211 2246789
Q ss_pred cccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeee
Q psy3706 166 NPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKG 245 (443)
Q Consensus 166 qPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkG 245 (443)
++ |.|.|-+ -.+|..+.+.+++|...|+..+- ..+|++.-+.|+.|||-||- ++-.|+.+.+ --..|
T Consensus 90 ~~-GhG~SdG--l~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGA----V~Ll~~~k~p-----~~w~G 156 (313)
T KOG1455|consen 90 YE-GHGRSDG--LHAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGA----VALLIALKDP-----NFWDG 156 (313)
T ss_pred cc-CCCcCCC--CcccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchH----HHHHHHhhCC-----ccccc
Confidence 87 9999864 34699999999999988776554 46778899999999999994 5555554322 23556
Q ss_pred eEecCCcc
Q psy3706 246 FALGNDLT 253 (443)
Q Consensus 246 i~IGNG~~ 253 (443)
+++-.+.+
T Consensus 157 ~ilvaPmc 164 (313)
T KOG1455|consen 157 AILVAPMC 164 (313)
T ss_pred ceeeeccc
Confidence 65555544
No 64
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.01 E-value=0.9 Score=45.54 Aligned_cols=114 Identities=18% Similarity=0.264 Sum_probs=60.6
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhc-------cccccccceEEcCCCCCCCCcccccCcCccccCceeeEE
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMT-------GLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYI 164 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~-------G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyi 164 (443)
+...=||++.-..-++.+||||-|.|+=|..... -+..+.|=..+=+++. +-.||
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~----------~~~wn-------- 105 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGY----------DRAWN-------- 105 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCcc----------ccccC--------
Confidence 3467889998888888999999999987654321 1222222112222211 11222
Q ss_pred ecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHH
Q psy3706 165 DNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFN 229 (443)
Q Consensus 165 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~ 229 (443)
|-+.|=+|...+ -....+++ ..+.+.+.+....|- .....+||+|-|-||..+-.++..
T Consensus 106 --~~~~~~~~~p~~--~~~g~ddV-gflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 106 --ANGCGNWFGPAD--RRRGVDDV-GFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred --CCcccccCCccc--ccCCccHH-HHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhc
Confidence 445665654442 12222232 222222222223332 233469999999999866555543
No 65
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=89.99 E-value=2 Score=44.40 Aligned_cols=135 Identities=10% Similarity=-0.014 Sum_probs=74.5
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccc--cccceEEcCCCCCCCCccccc--CcCccccCceeeEEecc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQ--ENGPLQLNKNKKRQPLPYVEK--RKTYWSKNHNVIYIDNP 167 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~--E~GP~~v~~~~~~~~~~~l~~--n~~sW~~~anllyiDqP 167 (443)
+.+++|+-+... ++...|.||.+.|-+|.+....... +.+|=.+.. +.. .+.- .+...||-+|.|
T Consensus 32 ~~~~~y~~~G~~-~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~---------~~~~~~~l~-~~~~~vi~~Dl~ 100 (379)
T PRK00175 32 PVELAYETYGTL-NADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDN---------MVGPGKPID-TDRYFVICSNVL 100 (379)
T ss_pred CceEEEEecccc-CCCCCCEEEEeCCcCCchhhcccccccCCCCcchhh---------ccCCCCccC-ccceEEEeccCC
Confidence 346788765321 1345799999999999876543210 000000000 000 0000 245689999988
Q ss_pred cccccccccCC------Ccc-----ccchhHHHHHHHHHHHHHHHHccccCCCc-EEEEecccccccchhhhHHHhhcCC
Q psy3706 168 VGRGFSFAEDY------DLY-----SRNKTQVGLNLYIALVQFFKVFNEYQRND-FFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 168 vGtGfSy~~~~------~~~-----~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~-~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
-+.|.|-...+ ..+ ..+.++.++++.++|+. . .-.+ ++|.|.|.||..+-.+|..-
T Consensus 101 G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l---~~~~~~~lvG~S~Gg~ia~~~a~~~----- 168 (379)
T PRK00175 101 GGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA----L---GITRLAAVVGGSMGGMQALEWAIDY----- 168 (379)
T ss_pred CCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH----h---CCCCceEEEEECHHHHHHHHHHHhC-----
Confidence 54555532211 001 23455666666666653 2 3345 58999999997766666642
Q ss_pred CCcceeeeeeeEecCCcc
Q psy3706 236 VTDIKINLKGFALGNDLT 253 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~ 253 (443)
+-.++++++.|+..
T Consensus 169 ----p~~v~~lvl~~~~~ 182 (379)
T PRK00175 169 ----PDRVRSALVIASSA 182 (379)
T ss_pred ----hHhhhEEEEECCCc
Confidence 23578888888644
No 66
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=89.66 E-value=1.3 Score=48.15 Aligned_cols=130 Identities=14% Similarity=0.086 Sum_probs=75.5
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCcc-ccCceeeEEeccccc
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYW-SKNHNVIYIDNPVGR 170 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW-~~~anllyiDqPvGt 170 (443)
+..|+...+.... .+..|+||.++|-...+.... +... . ...-| .+-..++-+|.+ |.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~-----~~~~----~----------~~~~l~~~Gy~vv~~D~R-G~ 64 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRW-----GLDK----T----------EPAWFVAQGYAVVIQDTR-GR 64 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcc-----cccc----c----------cHHHHHhCCcEEEEEecc-cc
Confidence 4578776554332 346899999985432211100 0000 0 00012 135778999976 99
Q ss_pred ccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecC
Q psy3706 171 GFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGN 250 (443)
Q Consensus 171 GfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGN 250 (443)
|.|-.... .. + .+.++|+.++++ |...-|. ...++.++|.||||...-.+|.. . +-.||+|+.-.
T Consensus 65 g~S~g~~~--~~-~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~----~-----~~~l~aiv~~~ 129 (550)
T TIGR00976 65 GASEGEFD--LL-G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL----Q-----PPALRAIAPQE 129 (550)
T ss_pred ccCCCceE--ec-C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc----C-----CCceeEEeecC
Confidence 98864321 11 1 456677776665 6665563 34589999999999653333321 1 12689999988
Q ss_pred CccChhh
Q psy3706 251 DLTDPLY 257 (443)
Q Consensus 251 G~~dp~~ 257 (443)
++.|...
T Consensus 130 ~~~d~~~ 136 (550)
T TIGR00976 130 GVWDLYR 136 (550)
T ss_pred cccchhH
Confidence 8877543
No 67
>PRK10985 putative hydrolase; Provisional
Probab=89.54 E-value=2.3 Score=42.81 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=20.7
Q ss_pred ceEEEEEeecCCCCCCCCEEEEecCCCCchh
Q psy3706 93 SALFFWFFPAEEYPSNAPVLLWLNAGLGSSS 123 (443)
Q Consensus 93 ~~lFfwffes~~~~~~~PlvlWlnGGPG~SS 123 (443)
..+.+++.+....+.++|+||.+.|.+|++.
T Consensus 42 ~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~ 72 (324)
T PRK10985 42 DFVDLAWSEDPAQARHKPRLVLFHGLEGSFN 72 (324)
T ss_pred CEEEEecCCCCccCCCCCEEEEeCCCCCCCc
Confidence 3454444443334567899999999998753
No 68
>PRK10162 acetyl esterase; Provisional
Probab=88.51 E-value=2.2 Score=43.03 Aligned_cols=45 Identities=9% Similarity=-0.043 Sum_probs=33.6
Q ss_pred CCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 208 RNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 208 ~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
...+.|+|+|.||+.+-.++....+.. .....++|+++-.|++|.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~---~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQ---IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcC---CCccChhheEEECCccCC
Confidence 457999999999999988887664432 112457888888888874
No 69
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=88.41 E-value=4 Score=43.43 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=44.9
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHH
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFN 229 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~ 229 (443)
..|+|-+|.|-+..-.|... ..+...+|+++.++|+...+..- +.-.+++|.|+|.|||-+-.+|.+
T Consensus 73 d~nVI~VDw~g~g~s~y~~a----~~~t~~vg~~la~lI~~L~~~~g-l~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTS----AAYTKLVGKDVAKFVNWMQEEFN-YPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred CCEEEEEECCCcCCCCCccc----cccHHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHHHh
Confidence 47999999984432223211 23456788888887765544432 455789999999999976666553
No 70
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=88.35 E-value=2.2 Score=45.37 Aligned_cols=33 Identities=15% Similarity=0.018 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHccccCCCcEEEEecccccccch
Q psy3706 191 NLYIALVQFFKVFNEYQRNDFFITGETYIGQFGT 224 (443)
Q Consensus 191 d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP 224 (443)
..++++++-.+.|. -..+++.|+|+|.||+-+-
T Consensus 159 ~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~ 191 (493)
T cd00312 159 LALKWVQDNIAAFG-GDPDSVTIFGESAGGASVS 191 (493)
T ss_pred HHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhh
Confidence 34445555555554 3346799999999997543
No 71
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=87.81 E-value=2.1 Score=42.00 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=54.5
Q ss_pred ceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCc
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTD 238 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~ 238 (443)
.+++-+|.| |.|-|-... .+.++..+|+..+++.+-+..|.+ .++.+.|.|.||..+-.+|. . .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~---~-~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP---A-D---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh---h-C----
Confidence 678999998 988874321 244566778887777665656644 35999999999964333321 1 1
Q ss_pred ceeeeeeeEecCCccCh
Q psy3706 239 IKINLKGFALGNDLTDP 255 (443)
Q Consensus 239 ~~iNLkGi~IGNG~~dp 255 (443)
-.++|+++-|+++..
T Consensus 122 --~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 122 --LRVAGLVLLNPWVRT 136 (274)
T ss_pred --CCccEEEEECCccCC
Confidence 258999999998764
No 72
>PLN00021 chlorophyllase
Probab=87.79 E-value=1.9 Score=43.64 Aligned_cols=123 Identities=11% Similarity=0.100 Sum_probs=64.8
Q ss_pred EEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccc
Q psy3706 96 FFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFA 175 (443)
Q Consensus 96 Ffwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~ 175 (443)
..++.++. ..+.|+|||+.|+.+.+....-+.+. +. +| -..++.+|.+ | ++-.
T Consensus 41 ~~v~~P~~--~g~~PvVv~lHG~~~~~~~y~~l~~~----------------La----s~--G~~VvapD~~-g--~~~~ 93 (313)
T PLN00021 41 LLVATPSE--AGTYPVLLFLHGYLLYNSFYSQLLQH----------------IA----SH--GFIVVAPQLY-T--LAGP 93 (313)
T ss_pred EEEEeCCC--CCCCCEEEEECCCCCCcccHHHHHHH----------------HH----hC--CCEEEEecCC-C--cCCC
Confidence 34565543 46789999999986654322111000 10 11 2345666655 2 2211
Q ss_pred cCCCccccchhHHHHHHHHHHHHHHHH-cc---ccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 176 EDYDLYSRNKTQVGLNLYIALVQFFKV-FN---EYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 176 ~~~~~~~~~~~~~a~d~~~fL~~Ff~~-fp---e~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
. . ..+.+.+.++.++|.+-.+. .| +....+++|+|+|.||..+-.+|...-+ ......+++++.-++
T Consensus 94 ~----~-~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~----~~~~~~v~ali~ldP 164 (313)
T PLN00021 94 D----G-TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAA----VSLPLKFSALIGLDP 164 (313)
T ss_pred C----c-hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccc----cccccceeeEEeecc
Confidence 1 1 11223355556666554432 23 2334579999999999877666654322 112245788877676
Q ss_pred ccC
Q psy3706 252 LTD 254 (443)
Q Consensus 252 ~~d 254 (443)
+..
T Consensus 165 v~g 167 (313)
T PLN00021 165 VDG 167 (313)
T ss_pred ccc
Confidence 543
No 73
>KOG1838|consensus
Probab=87.23 E-value=3.3 Score=43.47 Aligned_cols=123 Identities=17% Similarity=0.176 Sum_probs=78.3
Q ss_pred CceEEEEEeecCC----CCCCCCEEEEecCCCCchhh------ccccccccceEEcCCCCCCCCcccccCcCccccCcee
Q psy3706 92 SSALFFWFFPAEE----YPSNAPVLLWLNAGLGSSSM------TGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNV 161 (443)
Q Consensus 92 ~~~lFfwffes~~----~~~~~PlvlWlnGGPG~SSl------~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anl 161 (443)
+.-..=|+.+... +..++|+||-|-|=.|.|.- .....+.| |++ +
T Consensus 104 G~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~-----------V------------- 158 (409)
T KOG1838|consen 104 GTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV-----------V------------- 158 (409)
T ss_pred CEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE-----------E-------------
Confidence 3445557765543 24678999999999998853 34445566 443 2
Q ss_pred eEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCccee
Q psy3706 162 IYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKI 241 (443)
Q Consensus 162 lyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~i 241 (443)
|=++-|.|-|-.+++.-|.-.. .+|+-++++---++|| .+++|.+|.|+||.. +..++-+... + .-
T Consensus 159 --VfN~RG~~g~~LtTpr~f~ag~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~--~-~~ 224 (409)
T KOG1838|consen 159 --VFNHRGLGGSKLTTPRLFTAGW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGD--N-TP 224 (409)
T ss_pred --EECCCCCCCCccCCCceeecCC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccC--C-CC
Confidence 2246687777666655443222 2355556655567899 569999999999984 4555544221 1 22
Q ss_pred eeeeeEecCCcc
Q psy3706 242 NLKGFALGNDLT 253 (443)
Q Consensus 242 NLkGi~IGNG~~ 253 (443)
=..|++|-|||-
T Consensus 225 l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 225 LIAAVAVCNPWD 236 (409)
T ss_pred ceeEEEEeccch
Confidence 368899999885
No 74
>PLN02454 triacylglycerol lipase
Probab=86.20 E-value=1.7 Score=45.65 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=52.9
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
+...+.+++...++...+.+|..+ -.++|+|+|-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 445788899999999999999764 3699999999999888888787664211 123557778888877754
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=84.77 E-value=2.5 Score=39.58 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=54.2
Q ss_pred ceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCc
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTD 238 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~ 238 (443)
.++..|+.| |-+ .+.....+-++.|+...+.|+ +..| .-|++|+|.|+||..+=.+|.++.+++
T Consensus 28 ~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~---~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G---- 91 (229)
T PF00975_consen 28 IGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIR---ARQP---EGPYVLAGWSFGGILAFEMARQLEEAG---- 91 (229)
T ss_dssp EEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHH---HHTS---SSSEEEEEETHHHHHHHHHHHHHHHTT----
T ss_pred EEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhh---hhCC---CCCeeehccCccHHHHHHHHHHHHHhh----
Confidence 556778866 444 222345678888888777774 3333 239999999999999999998887753
Q ss_pred ceeeeeeeEecCCcc
Q psy3706 239 IKINLKGFALGNDLT 253 (443)
Q Consensus 239 ~~iNLkGi~IGNG~~ 253 (443)
...+.|++-++..
T Consensus 92 --~~v~~l~liD~~~ 104 (229)
T PF00975_consen 92 --EEVSRLILIDSPP 104 (229)
T ss_dssp ---SESEEEEESCSS
T ss_pred --hccCceEEecCCC
Confidence 4577888888643
No 76
>KOG2100|consensus
Probab=84.28 E-value=2 Score=48.71 Aligned_cols=152 Identities=22% Similarity=0.194 Sum_probs=86.0
Q ss_pred ceEEEEEeecCC--CCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCcccc-CceeeEEecccc
Q psy3706 93 SALFFWFFPAEE--YPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSK-NHNVIYIDNPVG 169 (443)
Q Consensus 93 ~~lFfwffes~~--~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~-~anllyiDqPvG 169 (443)
-...+++.-..+ +.++-||+++.-|||+.-+-.+.| . +..+.+.+.. -+=++-|| +-|
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~------~------------~~~~~~~~s~~g~~v~~vd-~RG 568 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKF------S------------VDWNEVVVSSRGFAVLQVD-GRG 568 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeE------E------------ecHHHHhhccCCeEEEEEc-CCC
Confidence 355566655443 335789999999999943322222 1 2223332222 24467788 778
Q ss_pred cccccccCCCccccch-hHHHHHHHHHHHHHHHHccccCCC-cEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeE
Q psy3706 170 RGFSFAEDYDLYSRNK-TQVGLNLYIALVQFFKVFNEYQRN-DFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFA 247 (443)
Q Consensus 170 tGfSy~~~~~~~~~~~-~~~a~d~~~fL~~Ff~~fpe~~~~-~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~ 247 (443)
+|+.-..--....++. +...+|...+.+.+.+.+ +..+ .+.|+|-||||- ++..++...+ .--+|.-+
T Consensus 569 s~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~--~iD~~ri~i~GwSyGGy----~t~~~l~~~~----~~~fkcgv 638 (755)
T KOG2100|consen 569 SGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP--FIDRSRVAIWGWSYGGY----LTLKLLESDP----GDVFKCGV 638 (755)
T ss_pred cCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc--cccHHHeEEeccChHHH----HHHHHhhhCc----CceEEEEE
Confidence 8876332111222222 234567777777777766 5544 599999999994 5555554321 23456656
Q ss_pred ecCCccChhhHHH-HHHHHHhcCCCChhh
Q psy3706 248 LGNDLTDPLYMML-YSKYLYQIGLIDDNG 275 (443)
Q Consensus 248 IGNG~~dp~~q~~-y~~f~y~~GLId~~~ 275 (443)
--+|.+|...--. |.+- .+|+-.++.
T Consensus 639 avaPVtd~~~yds~~ter--ymg~p~~~~ 665 (755)
T KOG2100|consen 639 AVAPVTDWLYYDSTYTER--YMGLPSEND 665 (755)
T ss_pred EecceeeeeeecccccHh--hcCCCcccc
Confidence 6678888763222 3332 266666654
No 77
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=82.80 E-value=2.3 Score=40.99 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=27.4
Q ss_pred ccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 205 EYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 205 e~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
..-.+.+|++|.|=||...-.++..- +=-+.++++-.|..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~---------pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAY---------PDLFAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhC---------CccceEEEeecccc
Confidence 35567899999999997665555432 12466777776654
No 78
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=79.75 E-value=3.8 Score=35.31 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
...+.+.+.|++..+..| ...+.|+|+|=||-..-.++..+.++.... ..+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~--~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSS--SSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTS--TTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccccc--ccceeeeecCCcccc
Confidence 566677778888777777 468999999999999999999988754321 467778888887663
No 79
>KOG4178|consensus
Probab=78.07 E-value=24 Score=36.00 Aligned_cols=133 Identities=17% Similarity=0.099 Sum_probs=83.7
Q ss_pred eEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEEEEecCCCCchhh----ccccccccceEEcCCCCCCCCcccccC
Q psy3706 76 SYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSM----TGLFQENGPLQLNKNKKRQPLPYVEKR 151 (443)
Q Consensus 76 ~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl----~G~f~E~GP~~v~~~~~~~~~~~l~~n 151 (443)
.-.+|+++ + .+++++.+. .++..|+||.|.|=|=.+=. ...|.-.
T Consensus 22 ~~hk~~~~----~-----gI~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~~~la~~-------------------- 70 (322)
T KOG4178|consen 22 ISHKFVTY----K-----GIRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQIPGLASR-------------------- 70 (322)
T ss_pred cceeeEEE----c-----cEEEEEEee--cCCCCCEEEEEccCCccchhhhhhhhhhhhc--------------------
Confidence 44678888 3 288888777 78899999999987754322 1111111
Q ss_pred cCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHh
Q psy3706 152 KTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIY 231 (443)
Q Consensus 152 ~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~ 231 (443)
-..++.+|.+ |-|+|=+.... ..-+.+..+.|+..+|.. +....+++.|++||+.-+=.+|..-=
T Consensus 71 ------~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~P 135 (322)
T KOG4178|consen 71 ------GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYP 135 (322)
T ss_pred ------ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhCh
Confidence 1567899988 88888554431 222566677777666542 33568999999999976555555432
Q ss_pred hcCCCCcceeeeeeeEecCCccChhhH
Q psy3706 232 QNNPVTDIKINLKGFALGNDLTDPLYM 258 (443)
Q Consensus 232 ~~n~~~~~~iNLkGi~IGNG~~dp~~q 258 (443)
++ -+--+++.+... |+..+|...
T Consensus 136 er---v~~lv~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 136 ER---VDGLVTLNVPFP-NPKLKPLDS 158 (322)
T ss_pred hh---cceEEEecCCCC-Ccccchhhh
Confidence 21 112345555544 777777654
No 80
>PLN02872 triacylglycerol lipase
Probab=77.22 E-value=9.3 Score=40.03 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCCCchhhccccc-cccc-eEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCC-----C
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQ-ENGP-LQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDY-----D 179 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~-E~GP-~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~-----~ 179 (443)
...|.||.+.|..++|..+.+-. +.+. +.+.+ +-..+.-.|.. |.|+|+.... .
T Consensus 72 ~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~------------------~GydV~l~n~R-G~~~s~gh~~~~~~~~ 132 (395)
T PLN02872 72 QRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD------------------HGFDVWVGNVR-GTRWSYGHVTLSEKDK 132 (395)
T ss_pred CCCCeEEEeCcccccccceeecCcccchHHHHHh------------------CCCCccccccc-ccccccCCCCCCccch
Confidence 45789999999888877653221 1111 11111 11234445654 7777754321 1
Q ss_pred c-cccchhHHH-HHHHHHHHHHHHHccccCCCcEEEEecccccccc
Q psy3706 180 L-YSRNKTQVG-LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFG 223 (443)
Q Consensus 180 ~-~~~~~~~~a-~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yv 223 (443)
. ...+-++.| .|+-++++...+. ...++++.|+|.||...
T Consensus 133 ~fw~~s~~e~a~~Dl~a~id~i~~~----~~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 133 EFWDWSWQELALYDLAEMIHYVYSI----TNSKIFIVGHSQGTIMS 174 (395)
T ss_pred hccCCcHHHHHHHHHHHHHHHHHhc----cCCceEEEEECHHHHHH
Confidence 1 123455666 6777777766553 23589999999999643
No 81
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=76.99 E-value=3 Score=35.59 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=42.1
Q ss_pred ceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCc
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTD 238 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~ 238 (443)
.+++.+|.| |.|-+- ..+.++++++.+. +..+ ..++++++|.|.||..+..++..-
T Consensus 27 ~~v~~~~~~-~~~~~~----------~~~~~~~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-------- 82 (145)
T PF12695_consen 27 YAVVAFDYP-GHGDSD----------GADAVERVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-------- 82 (145)
T ss_dssp EEEEEESCT-TSTTSH----------HSHHHHHHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS--------
T ss_pred CEEEEEecC-CCCccc----------hhHHHHHHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc--------
Confidence 566777876 444441 1123333333332 3334 557899999999999776666631
Q ss_pred ceeeeeeeEecCCccC
Q psy3706 239 IKINLKGFALGNDLTD 254 (443)
Q Consensus 239 ~~iNLkGi~IGNG~~d 254 (443)
-.+++++.-.|+.+
T Consensus 83 --~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 83 --PRVKAVVLLSPYPD 96 (145)
T ss_dssp --TTESEEEEESESSG
T ss_pred --cceeEEEEecCccc
Confidence 24677777777644
No 82
>PRK11460 putative hydrolase; Provisional
Probab=75.89 E-value=7.7 Score=37.15 Aligned_cols=37 Identities=3% Similarity=-0.172 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHccccCCCcEEEEecccccccchhhhH
Q psy3706 191 NLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGF 228 (443)
Q Consensus 191 d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~ 228 (443)
.+.++++.+.+.. ....++++|.|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444444333332 234567999999999987755543
No 83
>PLN02571 triacylglycerol lipase
Probab=75.87 E-value=6.7 Score=41.33 Aligned_cols=71 Identities=13% Similarity=0.153 Sum_probs=51.6
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcC--CC---CcceeeeeeeEecCCccCh
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNN--PV---TDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n--~~---~~~~iNLkGi~IGNG~~dp 255 (443)
+...+.+++...|+.+.+++|.. ...++|+|+|-||-.+-..|..|.... +. ....+++..+..|.|-+..
T Consensus 202 ~k~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 202 NKTSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred chhhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 33466788999999999998865 347999999999998888888886532 11 1223567778888877653
No 84
>COG0400 Predicted esterase [General function prediction only]
Probab=74.48 E-value=9.9 Score=36.28 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=50.5
Q ss_pred ecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeee
Q psy3706 165 DNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLK 244 (443)
Q Consensus 165 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLk 244 (443)
..+....|+......--..+....+..+.+||....+.+. ...+++++.|-|-|+..+-.+...- +-.++
T Consensus 56 ~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~---------~~~~~ 125 (207)
T COG0400 56 ENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTL---------PGLFA 125 (207)
T ss_pred ccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhC---------chhhc
Confidence 3444555665443322233455666777788888777665 3357899999999998665544332 23567
Q ss_pred eeEecCCccChh
Q psy3706 245 GFALGNDLTDPL 256 (443)
Q Consensus 245 Gi~IGNG~~dp~ 256 (443)
|+++=.|..-+.
T Consensus 126 ~ail~~g~~~~~ 137 (207)
T COG0400 126 GAILFSGMLPLE 137 (207)
T ss_pred cchhcCCcCCCC
Confidence 777766665443
No 85
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=73.93 E-value=15 Score=36.06 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=41.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeE
Q psy3706 182 SRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFA 247 (443)
Q Consensus 182 ~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~ 247 (443)
.-+.++..+.-++||+++....+ ..+.+++|.|+|=|+ .++.+|+++.. ..+.+++++.
T Consensus 58 ~~sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~--~~~~~V~~~~ 116 (266)
T PF10230_consen 58 LFSLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP--DLKFRVKKVI 116 (266)
T ss_pred ccCHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc--ccCCceeEEE
Confidence 44788888899999999887664 246789999999987 46777776543 2234555443
No 86
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=73.77 E-value=8.7 Score=35.39 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHH---ccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 187 QVGLNLYIALVQFFKV---FNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~---fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
+..+|..++++-..+. +. +...+++|+|+|=||+.+-.++..+.+... ..++|+++-.|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SAGg~la~~~~~~~~~~~~-----~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLG-IDPERIVLIGDSAGGHLALSLALRARDRGL-----PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHT-EEEEEEEEEEETHHHHHHHHHHHHHHHTTT-----CHESEEEEESCHSST
T ss_pred ccccccccceeeecccccccc-ccccceEEeecccccchhhhhhhhhhhhcc-----cchhhhhcccccccc
Confidence 4455555555544443 22 445689999999999999999988877431 238999999999877
No 87
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=73.72 E-value=2.4 Score=43.35 Aligned_cols=71 Identities=18% Similarity=0.205 Sum_probs=50.5
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
...|||-||.-.+..-.|.. -+.+...+++.+-.||+.....+. +...+++|.|+|-|+|-+=.+++++-.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~g-~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNFG-VPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhcC-CChhHEEEEeeccchhhhhhhhhhccC
Confidence 47899999998777655543 245678889988888888775432 345789999999999987777777654
No 88
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=71.09 E-value=17 Score=36.02 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=73.0
Q ss_pred EEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccc
Q psy3706 96 FFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFA 175 (443)
Q Consensus 96 Ffwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~ 175 (443)
..+|.+......+.|+||++.|| |.. .|+-..... ......=..-+=++-||-+..-...
T Consensus 66 ~~~y~p~~~~~~~~p~vly~HGG-------g~~--~g~~~~~~~---------~~~~~~~~~g~~vv~vdYrlaPe~~-- 125 (312)
T COG0657 66 VRVYRPDRKAAATAPVVLYLHGG-------GWV--LGSLRTHDA---------LVARLAAAAGAVVVSVDYRLAPEHP-- 125 (312)
T ss_pred EEEECCCCCCCCCCcEEEEEeCC-------eee--ecChhhhHH---------HHHHHHHHcCCEEEecCCCCCCCCC--
Confidence 45565533445679999999998 221 122111100 0000011123345667755444333
Q ss_pred cCCCccccchhHHHHHHHHHHHHHHHHccccC--CCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 176 EDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQ--RNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 176 ~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~--~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
++... +|.+.+++...+.-.++. .+.+.|+|+|=||+.+-.++....+.. ...+++.++.-+++
T Consensus 126 -----~p~~~----~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~-----~~~p~~~~li~P~~ 191 (312)
T COG0657 126 -----FPAAL----EDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG-----LPLPAAQVLISPLL 191 (312)
T ss_pred -----CCchH----HHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC-----CCCceEEEEEeccc
Confidence 33223 334444444443333343 467999999999999999999887642 24578888888998
Q ss_pred Chhh
Q psy3706 254 DPLY 257 (443)
Q Consensus 254 dp~~ 257 (443)
|...
T Consensus 192 d~~~ 195 (312)
T COG0657 192 DLTS 195 (312)
T ss_pred CCcc
Confidence 8875
No 89
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=70.66 E-value=7.2 Score=40.89 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=52.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHHccccCC-CcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhH
Q psy3706 180 LYSRNKTQVGLNLYIALVQFFKVFNEYQR-NDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYM 258 (443)
Q Consensus 180 ~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~-~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q 258 (443)
.|..=--..|.|...||..-.+.||.... .|..+.|.|||| |+..|+.+|. +-.+.||+=-.+|+-|..+
T Consensus 154 EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a--------P~~~~~~iDns~~~~p~l~ 224 (403)
T PF11144_consen 154 EYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA--------PWLFDGVIDNSSYALPPLR 224 (403)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC--------ccceeEEEecCccccchhh
Confidence 34433456889999999999999999986 688888999987 6666666663 4567777777778777544
No 90
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=69.87 E-value=14 Score=35.67 Aligned_cols=87 Identities=14% Similarity=0.038 Sum_probs=59.6
Q ss_pred eeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcc
Q psy3706 160 NVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDI 239 (443)
Q Consensus 160 nllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~ 239 (443)
+...|+-|.+-+-=-.-..-.+..+..+-++.+.+++..+.. ..+++.|+|.|-|+.-+-...+++.+.... .
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~--~ 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP--P 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC--C
Confidence 456677777543210111113556788888899999988776 678999999999998777777777663221 1
Q ss_pred eeeeeeeEecCCcc
Q psy3706 240 KINLKGFALGNDLT 253 (443)
Q Consensus 240 ~iNLkGi~IGNG~~ 253 (443)
.=+|+-+++||+--
T Consensus 77 ~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 PDDLSFVLIGNPRR 90 (225)
T ss_pred cCceEEEEecCCCC
Confidence 15788999999843
No 91
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=69.07 E-value=9 Score=37.01 Aligned_cols=70 Identities=11% Similarity=-0.002 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHcccc-CCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhh
Q psy3706 188 VGLNLYIALVQFFKVFNEY-QRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLY 257 (443)
Q Consensus 188 ~a~d~~~fL~~Ff~~fpe~-~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~ 257 (443)
.|..--..|.+|++..-+. ...+++|.++|-|+.-+-..-..+.......+..-.|..|++-+|-+|.+.
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 4444455555555544433 467899999999999877766666654332122348899999999998754
No 92
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=68.78 E-value=9.3 Score=33.79 Aligned_cols=61 Identities=10% Similarity=0.149 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
..+++.+...+++..+.+| ..+++|+|+|-||..+-.+|..+..+.. .-..+-+..|-+-+
T Consensus 8 ~~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~----~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC----CCceEEEEeCCCcc
Confidence 4455666666666666666 5589999999999988888888765321 12344455554433
No 93
>PF03283 PAE: Pectinacetylesterase
Probab=67.33 E-value=35 Score=35.41 Aligned_cols=151 Identities=13% Similarity=0.110 Sum_probs=78.8
Q ss_pred ceEEEEEeecCCCCCCCCEEEEecCCCCchhhc----cccccccceEE-----cCCCCCCCCcccccCcCccccCceeeE
Q psy3706 93 SALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMT----GLFQENGPLQL-----NKNKKRQPLPYVEKRKTYWSKNHNVIY 163 (443)
Q Consensus 93 ~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~----G~f~E~GP~~v-----~~~~~~~~~~~l~~n~~sW~~~anlly 163 (443)
+--.|++-+.. ....+-+||.|+||=.|-+.. -..++.|-..- ..++-. ...-..||.=| ..|++|
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gil--s~~~~~Np~f~--~wN~V~ 109 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGIL--SNDPAENPDFY--NWNHVF 109 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccc--cCCcccCCccc--cccEEE
Confidence 44455555542 345679999999999997742 23344553321 111110 01133455222 267888
Q ss_pred EecccccccccccCCCcccc---chhHHHHHHHHHHHH-HHHH-ccccCCCcEEEEecccccccchhhhHHHhhcCCCCc
Q psy3706 164 IDNPVGRGFSFAEDYDLYSR---NKTQVGLNLYIALVQ-FFKV-FNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTD 238 (443)
Q Consensus 164 iDqPvGtGfSy~~~~~~~~~---~~~~~a~d~~~fL~~-Ff~~-fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~ 238 (443)
|=- -+|=++.-+.+.... ...-.+..+++++.. .... +++ ..++.|+|.|=||--+..-+.+|.+.=+.
T Consensus 110 vpY--C~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~-- 183 (361)
T PF03283_consen 110 VPY--CDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS-- 183 (361)
T ss_pred EEe--cCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc--
Confidence 844 444444332211111 122334444444444 4454 553 34699999999998777777777653221
Q ss_pred ceeeeeeeEecCCccCh
Q psy3706 239 IKINLKGFALGNDLTDP 255 (443)
Q Consensus 239 ~~iNLkGi~IGNG~~dp 255 (443)
...++++.-..-++|-
T Consensus 184 -~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 184 -SVKVKCLSDSGFFLDN 199 (361)
T ss_pred -CceEEEeccccccccc
Confidence 3455665554444443
No 94
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=66.85 E-value=7 Score=37.38 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHH
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNI 230 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I 230 (443)
+-+-.|..++...|++.++ ++|||.|+|+|-|+..+-.|-+..
T Consensus 74 ~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3445688899999999887 689999999999998665554443
No 95
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=65.25 E-value=9 Score=36.34 Aligned_cols=68 Identities=10% Similarity=0.170 Sum_probs=46.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 180 LYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 180 ~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
++...-..+.+++...++...+.+| ..+++++|+|-||-.+-.+|..+.++. ...+++.+..|-|-+-
T Consensus 102 Gf~~~~~~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 102 GFYSAYKSLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 3333444555566666666666666 457999999999998887777776542 2346788888887663
No 96
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=62.68 E-value=8.7 Score=40.32 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=43.5
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhHHH
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYMML 260 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q~~ 260 (443)
+.+|+-+|+..|++.+-..+....+.++.++|-||||. ||.-+-.+-+ . -+.|..--.|-+....++.
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~----Laaw~r~kyP----~-~~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGA----LAAWFRLKYP----H-LFDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHH----HHHHHHHH-T----T-T-SEEEEET--CCHCCTTT
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhH----HHHHHHhhCC----C-eeEEEEeccceeeeecccH
Confidence 78899999999999988888767778999999999996 4444433212 1 1445555555555544433
No 97
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=60.52 E-value=20 Score=33.60 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhHHH------
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYMML------ 260 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q~~------ 260 (443)
+.++.+.+++....+.. ...++++|.|-|-||...-.++.+ . +-.|.|++.=.|++-+..+..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~----~-----p~~~~gvv~lsG~~~~~~~~~~~~~~~ 153 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALR----Y-----PEPLAGVVALSGYLPPESELEDRPEAL 153 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHC----T-----SSTSSEEEEES---TTGCCCHCCHCCC
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHH----c-----CcCcCEEEEeecccccccccccccccc
Confidence 33444444444444322 456789999999999755554432 1 226788888888875543221
Q ss_pred -HHHHHHhcCCCChh
Q psy3706 261 -YSKYLYQIGLIDDN 274 (443)
Q Consensus 261 -y~~f~y~~GLId~~ 274 (443)
-.+.++.||--|+-
T Consensus 154 ~~~pi~~~hG~~D~v 168 (216)
T PF02230_consen 154 AKTPILIIHGDEDPV 168 (216)
T ss_dssp CTS-EEEEEETT-SS
T ss_pred CCCcEEEEecCCCCc
Confidence 12455666655553
No 98
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=60.12 E-value=22 Score=37.50 Aligned_cols=23 Identities=13% Similarity=0.463 Sum_probs=14.9
Q ss_pred EEEeecCCCCCCCCEEEEecCCC
Q psy3706 97 FWFFPAEEYPSNAPVLLWLNAGL 119 (443)
Q Consensus 97 fwffes~~~~~~~PlvlWlnGGP 119 (443)
+.|.|..-+++..|||++|.|+.
T Consensus 197 ~VY~P~~y~~~~~PvlyllDG~~ 219 (411)
T PRK10439 197 WIYTTGDAAPEERPLAILLDGQF 219 (411)
T ss_pred EEEECCCCCCCCCCEEEEEECHH
Confidence 33444332356789999999865
No 99
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=58.13 E-value=18 Score=41.28 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=54.9
Q ss_pred cCcCccccCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHH----HH-------HccccCCCcEEEEeccc
Q psy3706 150 KRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQF----FK-------VFNEYQRNDFFITGETY 218 (443)
Q Consensus 150 ~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~F----f~-------~fpe~~~~~~yi~GESY 218 (443)
.+.|=-.+-.+++++|.+ |+|-|-+.-.. +...+.+.+.+..++|..- -. +-| +.+-.+-++|.||
T Consensus 271 ~~~~~~~rGYaVV~~D~R-Gtg~SeG~~~~-~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~-WsnGkVGm~G~SY 347 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGI-GTRGSDGCPTT-GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKAD-WSNGKVAMTGKSY 347 (767)
T ss_pred HHHHHHhCCeEEEEEcCC-CCCCCCCcCcc-CCHHHHHHHHHHHHHHhhCCccccccccccccccC-CCCCeeEEEEEcH
Confidence 334444456889999954 99988664321 1223333344444444320 00 111 2245799999999
Q ss_pred ccccchhhhHHHhhcCCCCcceeeeeeeEecCCccCh
Q psy3706 219 IGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 219 aG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp 255 (443)
+|...-++|..- .-.||.|+-..|+.|.
T Consensus 348 ~G~~~~~aAa~~---------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 348 LGTLPNAVATTG---------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHHhhC---------CCcceEEEeeCCCCcH
Confidence 997655554421 2358999988888774
No 100
>PLN02753 triacylglycerol lipase
Probab=57.52 E-value=25 Score=38.15 Aligned_cols=72 Identities=11% Similarity=0.129 Sum_probs=52.2
Q ss_pred chhHHHHHHHHHHHHHHHHccc--cCCCcEEEEecccccccchhhhHHHhhc--CC-CCcceeeeeeeEecCCccCh
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNE--YQRNDFFITGETYIGQFGTSLGFNIYQN--NP-VTDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe--~~~~~~yi~GESYaG~yvP~la~~I~~~--n~-~~~~~iNLkGi~IGNG~~dp 255 (443)
+...+.+++.+.++...+.+|. ...-.++|+|+|-||-..-..|..|.+. |. .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 4567888999999999998874 2345799999999999888888888653 21 11223556677777776654
No 101
>PLN02719 triacylglycerol lipase
Probab=55.92 E-value=27 Score=37.85 Aligned_cols=72 Identities=10% Similarity=0.196 Sum_probs=51.5
Q ss_pred chhHHHHHHHHHHHHHHHHccccC--CCcEEEEecccccccchhhhHHHhhcC--CC-CcceeeeeeeEecCCccCh
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQ--RNDFFITGETYIGQFGTSLGFNIYQNN--PV-TDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~--~~~~yi~GESYaG~yvP~la~~I~~~n--~~-~~~~iNLkGi~IGNG~~dp 255 (443)
+...+.+++...|++..+.+|... ...++|+|+|-||-..--.|..|.+.. .. ....+++.-+..|.|-+..
T Consensus 271 ~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 271 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred cchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 345677889999999999998653 346999999999999888888887632 11 1123445567777776654
No 102
>PLN02761 lipase class 3 family protein
Probab=55.87 E-value=27 Score=37.94 Aligned_cols=72 Identities=10% Similarity=0.156 Sum_probs=51.0
Q ss_pred chhHHHHHHHHHHHHHHHHcccc-C--CCcEEEEecccccccchhhhHHHhhcCCC----CcceeeeeeeEecCCccCh
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEY-Q--RNDFFITGETYIGQFGTSLGFNIYQNNPV----TDIKINLKGFALGNDLTDP 255 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~-~--~~~~yi~GESYaG~yvP~la~~I~~~n~~----~~~~iNLkGi~IGNG~~dp 255 (443)
+...+.+++...++...+.+|.. + .-.++|+|+|-||-..--.|..|...+.. ....+++.-+..|.|-+..
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 34567788999999999988643 2 23599999999999888888888653211 1234566677777776654
No 103
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=54.18 E-value=18 Score=33.80 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=33.6
Q ss_pred cCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhHHH
Q psy3706 206 YQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYMML 260 (443)
Q Consensus 206 ~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q~~ 260 (443)
+....+.|.|-|-||-|+-.+|.+. +++. ++.||.+.|...+.
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHHHH
Confidence 3445599999999999998888754 4555 67799999988765
No 104
>PLN02324 triacylglycerol lipase
Probab=53.75 E-value=32 Score=36.37 Aligned_cols=70 Identities=10% Similarity=0.143 Sum_probs=47.7
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC------CcceeeeeeeEecCCccC
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV------TDIKINLKGFALGNDLTD 254 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~------~~~~iNLkGi~IGNG~~d 254 (443)
+...+-+++...|+...+.+|.. ...+.|||+|-||-..-..|..|...... ....+++.-+..|.|-+.
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVG 266 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIG 266 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcC
Confidence 34567788889999999988853 23699999999999888888887653110 112344555556665554
No 105
>KOG2182|consensus
Probab=52.87 E-value=23 Score=38.14 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=33.3
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEeccccccc
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQF 222 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~y 222 (443)
+.+|+=.|+.+|+++-=.+|+.-...++..+|-||.|..
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsL 185 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSL 185 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHH
Confidence 678899999999999999999655558999999999964
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=52.59 E-value=18 Score=35.36 Aligned_cols=95 Identities=16% Similarity=0.053 Sum_probs=57.6
Q ss_pred ceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCc
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTD 238 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~ 238 (443)
..+|.+| .-|+|-|.+.-... ..+-++|.++.+ +|...-|.- +-.+-++|.||+|...-.+|..-
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEEC-CcccccCCCccccC----ChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC--------
Confidence 5678888 55999997654311 444555555443 466556644 44799999999998776666521
Q ss_pred ceeeeeeeEecCCccChhhHHHHHHHHHhcCCCChh
Q psy3706 239 IKINLKGFALGNDLTDPLYMMLYSKYLYQIGLIDDN 274 (443)
Q Consensus 239 ~~iNLkGi~IGNG~~dp~~q~~y~~f~y~~GLId~~ 274 (443)
.-.||.|+..-+..|...+ .+|.-|.+...
T Consensus 123 -~p~LkAi~p~~~~~d~~~~-----~~~~gG~~~~~ 152 (272)
T PF02129_consen 123 -PPHLKAIVPQSGWSDLYRD-----SIYPGGAFRLG 152 (272)
T ss_dssp --TTEEEEEEESE-SBTCCT-----SSEETTEEBCC
T ss_pred -CCCceEEEecccCCccccc-----chhcCCccccc
Confidence 2358999998888876553 23344555444
No 107
>KOG1454|consensus
Probab=51.97 E-value=52 Score=33.46 Aligned_cols=63 Identities=21% Similarity=0.156 Sum_probs=39.4
Q ss_pred ceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHH
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNI 230 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I 230 (443)
.-++=||=| |-|+| +..+.+ ..-.+++....+..|+. ++...+++|.|.||||...=.+|...
T Consensus 87 ~~v~aiDl~-G~g~~-s~~~~~----~~y~~~~~v~~i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYS-SPLPRG----PLYTLRELVELIRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred eEEEEEecC-CCCcC-CCCCCC----CceehhHHHHHHHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhC
Confidence 456789988 66643 222222 22344455555555554 44467899999999998777776663
No 108
>COG0627 Predicted esterase [General function prediction only]
Probab=50.89 E-value=47 Score=33.84 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=60.1
Q ss_pred CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccC-cCccccCceeeEEecccccccccccCCCccccch
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKR-KTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRNK 185 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n-~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~~ 185 (443)
.++.-|+|+.+|..|.. -.+.+.++++-..+.... .+.-+ -.-|....++-=|+ |+|.|.||=.+...-....
T Consensus 51 ~~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~---~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~ 124 (316)
T COG0627 51 GRDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGW---AVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWAS 124 (316)
T ss_pred CCCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCe---EEecCCCCcccCCCCccccc-cCCCccceecccccCcccc
Confidence 34455666667888875 234445555433332210 01111 22244444554445 7999999743321100111
Q ss_pred hHHHHHHHHHHH-----HHHHHccccCC-CcEEEEecccccccchhhhH
Q psy3706 186 TQVGLNLYIALV-----QFFKVFNEYQR-NDFFITGETYIGQFGTSLGF 228 (443)
Q Consensus 186 ~~~a~d~~~fL~-----~Ff~~fpe~~~-~~~yi~GESYaG~yvP~la~ 228 (443)
. ..+++.||. .|.+.||--++ ..-.|+|.|-||+=.=.+|.
T Consensus 125 ~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~ 171 (316)
T COG0627 125 G--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLAL 171 (316)
T ss_pred C--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhh
Confidence 1 356666664 46667774432 36889999999985444444
No 109
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=50.07 E-value=1.3e+02 Score=30.39 Aligned_cols=127 Identities=10% Similarity=0.064 Sum_probs=69.8
Q ss_pred CceEEEEEeecCCCCCCCCEEEEecCCCCchhhc--------cccccc-cceEEcCCCCCCCCcccccCcCccccCceee
Q psy3706 92 SSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMT--------GLFQEN-GPLQLNKNKKRQPLPYVEKRKTYWSKNHNVI 162 (443)
Q Consensus 92 ~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~--------G~f~E~-GP~~v~~~~~~~~~~~l~~n~~sW~~~anll 162 (443)
+..++|.-+...+ ....|.||.+.|=.|.+-.. |.+... ||-+ ..+ .+...|+
T Consensus 15 ~~~~~y~~~g~~~-~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~-------------~l~----~~~~~vi 76 (351)
T TIGR01392 15 DVRVAYETYGTLN-AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGR-------------AID----TDRYFVV 76 (351)
T ss_pred CceEEEEeccccC-CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCC-------------CcC----CCceEEE
Confidence 4578887664322 13457899999877754332 111110 1100 000 1456889
Q ss_pred EEecccc--cccccccC--CCc--c-----ccchhHHHHHHHHHHHHHHHHccccCCCc-EEEEecccccccchhhhHHH
Q psy3706 163 YIDNPVG--RGFSFAED--YDL--Y-----SRNKTQVGLNLYIALVQFFKVFNEYQRND-FFITGETYIGQFGTSLGFNI 230 (443)
Q Consensus 163 yiDqPvG--tGfSy~~~--~~~--~-----~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~-~yi~GESYaG~yvP~la~~I 230 (443)
=+|.| | .|-|-..+ ..+ + ..+.++.++++..++++ +.-.+ +.|.|+|.||..+-.+|..-
T Consensus 77 ~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~G~S~Gg~ia~~~a~~~ 148 (351)
T TIGR01392 77 CSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH-------LGIEQIAAVVGGSMGGMQALEWAIDY 148 (351)
T ss_pred EecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHC
Confidence 99998 5 44332111 011 1 23456666666666543 22345 99999999997666666541
Q ss_pred hhcCCCCcceeeeeeeEecCCcc
Q psy3706 231 YQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 231 ~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
+-.++++++-++..
T Consensus 149 ---------p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 149 ---------PERVRAIVVLATSA 162 (351)
T ss_pred ---------hHhhheEEEEccCC
Confidence 23478888877654
No 110
>KOG2183|consensus
Probab=49.22 E-value=26 Score=37.07 Aligned_cols=63 Identities=17% Similarity=0.287 Sum_probs=39.7
Q ss_pred CceeeEEe-------cccccccccccCCC-ccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccc
Q psy3706 158 NHNVIYID-------NPVGRGFSFAEDYD-LYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFG 223 (443)
Q Consensus 158 ~anllyiD-------qPvGtGfSy~~~~~-~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yv 223 (443)
.|-|+|+| +|.|.- ||.+... +|- +.+|+=.|+ ..|.+++++-.-=+..++..+|-||||+..
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADf-A~ll~~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADF-AELLTFLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHH-HHHHHHHhhccccccCcEEEecCchhhHHH
Confidence 35667777 588876 6654322 344 344444454 445566666554456789999999999643
No 111
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=49.18 E-value=33 Score=35.42 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=39.1
Q ss_pred cCceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHcc-ccCCCcEEEEeccccccc
Q psy3706 157 KNHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFN-EYQRNDFFITGETYIGQF 222 (443)
Q Consensus 157 ~~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fp-e~~~~~~yi~GESYaG~y 222 (443)
..+|+|..--| |||+|-+. + +.++.+++ ++++.+++...+ --+.+.+.+-|.|-||--
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~-----~-s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~V 228 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGP-----P-SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGV 228 (365)
T ss_pred cCCcEEEECCC-ccccCCCC-----C-CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHH
Confidence 56899999877 99999543 2 23444444 445556664433 245678999999999964
No 112
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=48.34 E-value=28 Score=32.87 Aligned_cols=63 Identities=11% Similarity=0.117 Sum_probs=48.6
Q ss_pred cchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 183 RNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 183 ~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
++.+++|.|+-+.++.+.++.. .+.+-+.|-|||.--+|.+..++-. ..+=.+++|++-.+-.
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w~---~~~vvLiGYSFGADvlP~~~nrLp~-----~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARWG---RKRVVLIGYSFGADVLPFIYNRLPA-----ALRARVAQVVLLSPST 107 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHhC---CceEEEEeecCCchhHHHHHhhCCH-----HHHhheeEEEEeccCC
Confidence 5789999999999999888654 7789999999999999999888743 2234566665554433
No 113
>KOG4627|consensus
Probab=45.95 E-value=25 Score=33.89 Aligned_cols=73 Identities=10% Similarity=0.071 Sum_probs=50.5
Q ss_pred cccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeE
Q psy3706 168 VGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFA 247 (443)
Q Consensus 168 vGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~ 247 (443)
+-+||-++.. .++.+++..++.++++--|+.+|.-+ .+-+.|+|=|.|..-.+..++.. -.+.|++
T Consensus 101 asvgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~--------prI~gl~ 166 (270)
T KOG4627|consen 101 ASVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS--------PRIWGLI 166 (270)
T ss_pred EEeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC--------chHHHHH
Confidence 3567766654 35789999999999998889998554 49999999998866555555432 2345555
Q ss_pred ecCCccC
Q psy3706 248 LGNDLTD 254 (443)
Q Consensus 248 IGNG~~d 254 (443)
+-.|+-+
T Consensus 167 l~~GvY~ 173 (270)
T KOG4627|consen 167 LLCGVYD 173 (270)
T ss_pred HHhhHhh
Confidence 5555444
No 114
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=45.08 E-value=1.1e+02 Score=31.16 Aligned_cols=146 Identities=12% Similarity=0.103 Sum_probs=70.4
Q ss_pred chhHHHHHHHHHHHHHHHHccc-cCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhHHH-H
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNE-YQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYMML-Y 261 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe-~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q~~-y 261 (443)
+.++.++++-.+++-+-..... +...++.|.|+|=|.+=|= +++...+.. ...-.++|+|+=.|..|.+.... .
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl---~Yl~~~~~~-~~~~~VdG~ILQApVSDREa~~~~~ 157 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVL---HYLSSPNPS-PSRPPVDGAILQAPVSDREAILNFL 157 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHH---HHHHH-TT----CCCEEEEEEEEE---TTSTTTSH
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHH---HHHhccCcc-ccccceEEEEEeCCCCChhHhhhcc
Confidence 5777788887776655544322 3466899999999998554 444443321 12467999999999999887544 2
Q ss_pred HHHHHhcCCCChhhHHHHHHHHHHHHHHHhccCHHHHHHHHHHhhhccCCCccccccccccccccCccCCCCCCC-Cchh
Q psy3706 262 SKYLYQIGLIDDNGRKLFEYKEKQITDLIFQKKLGEAFDVYDELIVGTFHDKTIYNTLTNFTNLYNYQVPIADNT-PNTL 340 (443)
Q Consensus 262 ~~f~y~~GLId~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~d~~l~g~~~~~s~f~~~tG~~n~yn~~~~~~dP~-~~~~ 340 (443)
.+ ++.+++..+.+.+.|.++.-++..- .. .. +..+.+ --.+.|.+..- ..|. ++++
T Consensus 158 ~~------------~~~~~~~v~~A~~~i~~g~~~~~lp--~~-~~-----~~~~~~--~PiTA~Rf~SL-~s~~gdDD~ 214 (303)
T PF08538_consen 158 GE------------REAYEELVALAKELIAEGKGDEILP--RE-FT-----PLVFYD--TPITAYRFLSL-ASPGGDDDY 214 (303)
T ss_dssp HH---------------HHHHHHHHHHHHHCT-TT-GG-------G-----GTTT-S--S---HHHHHT--S-SSHHHHT
T ss_pred cc------------hHHHHHHHHHHHHHHHcCCCCceee--cc-cc-----ccccCC--CcccHHHHHhc-cCCCCcccc
Confidence 22 3445555555666666655332110 00 00 000000 00111222111 1222 4577
Q ss_pred HHhhcCcHHHHHHhCC
Q psy3706 341 MVELFNTTTFRKAVHV 356 (443)
Q Consensus 341 ~~~yLN~pdVrkALHV 356 (443)
+...|.+.+.++-+|.
T Consensus 215 FSSDL~de~l~~tfG~ 230 (303)
T PF08538_consen 215 FSSDLSDERLKKTFGK 230 (303)
T ss_dssp HHHHHTT-HHHHTGGG
T ss_pred cCCCCCHHHHHHHhcc
Confidence 8888888888887764
No 115
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=44.80 E-value=43 Score=34.38 Aligned_cols=121 Identities=14% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEecCCCCchh------hccccccccceEEcCCCCCCCCcccccCcCccccCceeeEE
Q psy3706 91 YSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSS------MTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYI 164 (443)
Q Consensus 91 ~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SS------l~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyi 164 (443)
.+.-.+-|.-. ......|+||-+.|==|.|. +...+.+-| |.+ +-.
T Consensus 59 g~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~~~-------------------------Vv~ 110 (345)
T COG0429 59 GGFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-WLV-------------------------VVF 110 (345)
T ss_pred CCEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-CeE-------------------------EEE
Confidence 34567777753 22355699999999666553 233444445 332 222
Q ss_pred ecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeee
Q psy3706 165 DNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLK 244 (443)
Q Consensus 165 DqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLk 244 (443)
+ -=|.|-+-.....-|...+. +|+..||..--++|| .++||++|-|-||. .+|.++-+.. ...+ .-.
T Consensus 111 ~-~Rgcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg--~d~~-~~a 177 (345)
T COG0429 111 H-FRGCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEG--DDLP-LDA 177 (345)
T ss_pred e-cccccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhc--cCcc-cce
Confidence 2 11333332222222222222 566666665556777 68999999999995 4667766532 2222 366
Q ss_pred eeEecCCc
Q psy3706 245 GFALGNDL 252 (443)
Q Consensus 245 Gi~IGNG~ 252 (443)
++++-+++
T Consensus 178 a~~vs~P~ 185 (345)
T COG0429 178 AVAVSAPF 185 (345)
T ss_pred eeeeeCHH
Confidence 67666654
No 116
>KOG4391|consensus
Probab=44.15 E-value=92 Score=30.41 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=76.0
Q ss_pred ceEEEEEeecCCCCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEeccccccc
Q psy3706 93 SALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGF 172 (443)
Q Consensus 93 ~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGf 172 (443)
..|-=|...+++ ..|.+|.+.|--|- +|=+..... -+--+-..||+-+|-- |-|-
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGN---------mGhr~~i~~------------~fy~~l~mnv~ivsYR-GYG~ 119 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGN---------MGHRLPIAR------------VFYVNLKMNVLIVSYR-GYGK 119 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCc---------ccchhhHHH------------HHHHHcCceEEEEEee-cccc
Confidence 345555554433 89999999976653 232221111 1111245788888865 8887
Q ss_pred ccccCC-CccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC
Q psy3706 173 SFAEDY-DLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND 251 (443)
Q Consensus 173 Sy~~~~-~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG 251 (443)
|-+... +|...+.+.+-+ ++-..|...++++.+.|-|-||--+-++|.+-. -.+.++++-|-
T Consensus 120 S~GspsE~GL~lDs~avld--------yl~t~~~~dktkivlfGrSlGGAvai~lask~~---------~ri~~~ivENT 182 (300)
T KOG4391|consen 120 SEGSPSEEGLKLDSEAVLD--------YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS---------DRISAIIVENT 182 (300)
T ss_pred CCCCccccceeccHHHHHH--------HHhcCccCCcceEEEEecccCCeeEEEeeccch---------hheeeeeeech
Confidence 765433 233333322222 334689999999999999999987776666432 36789999998
Q ss_pred ccCh
Q psy3706 252 LTDP 255 (443)
Q Consensus 252 ~~dp 255 (443)
++.-
T Consensus 183 F~SI 186 (300)
T KOG4391|consen 183 FLSI 186 (300)
T ss_pred hccc
Confidence 8874
No 117
>COG4099 Predicted peptidase [General function prediction only]
Probab=43.56 E-value=2.8e+02 Score=28.45 Aligned_cols=32 Identities=19% Similarity=0.477 Sum_probs=22.2
Q ss_pred CCCCCceEEEEEeecCC-CC-CCC-CEEEEecCCC
Q psy3706 88 DKKYSSALFFWFFPAEE-YP-SNA-PVLLWLNAGL 119 (443)
Q Consensus 88 ~~~~~~~lFfwffes~~-~~-~~~-PlvlWlnGGP 119 (443)
+++.+..|-|-+|..+. +| ++- ||||||.|+-
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgag 201 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAG 201 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCC
Confidence 34556788888887653 33 344 9999999953
No 118
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=43.26 E-value=14 Score=26.31 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=24.7
Q ss_pred CccChhhHHH-HHHHHHhcCCCChhhHHHHHH
Q psy3706 251 DLTDPLYMML-YSKYLYQIGLIDDNGRKLFEY 281 (443)
Q Consensus 251 G~~dp~~q~~-y~~f~y~~GLId~~~~~~~~~ 281 (443)
|.+||.+-.. -.+=|+..|+||.+.+..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 8889988766 677789999999998877654
No 119
>KOG2281|consensus
Probab=42.19 E-value=58 Score=36.38 Aligned_cols=110 Identities=18% Similarity=0.186 Sum_probs=61.9
Q ss_pred CCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCc----------eeeEEeccccc---ccc
Q psy3706 107 SNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNH----------NVIYIDNPVGR---GFS 173 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~a----------nllyiDqPvGt---GfS 173 (443)
++-|++|..-||||. . ++.|.+.|.+.. =|++||+- |+ |.-
T Consensus 640 kkYptvl~VYGGP~V-------------------Q------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------Q------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLK 693 (867)
T ss_pred CCCceEEEEcCCCce-------------------E------EeeccccceehhhhhhhhhcceEEEEEcCC-Cccccchh
Confidence 568999999999985 2 566666666542 26899965 33 222
Q ss_pred cccC---CCccccchhHHHHHHHHHHHHHHHHccccCC-CcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEec
Q psy3706 174 FAED---YDLYSRNKTQVGLNLYIALVQFFKVFNEYQR-NDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALG 249 (443)
Q Consensus 174 y~~~---~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~-~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IG 249 (443)
|-.. .=|++.-+ |-.+.||-.-++.- |.. ..+-|-|-||||- ++...+.+-+ + -+|--+-|
T Consensus 694 FE~~ik~kmGqVE~e-----DQVeglq~Laeq~g-fidmdrV~vhGWSYGGY----LSlm~L~~~P----~-IfrvAIAG 758 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVE-----DQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGY----LSLMGLAQYP----N-IFRVAIAG 758 (867)
T ss_pred hHHHHhhccCeeeeh-----hhHHHHHHHHHhcC-cccchheeEeccccccH----HHHHHhhcCc----c-eeeEEecc
Confidence 2111 11222222 33344443334333 222 3488999999994 3444443221 1 25666778
Q ss_pred CCccChhh
Q psy3706 250 NDLTDPLY 257 (443)
Q Consensus 250 NG~~dp~~ 257 (443)
.+++++..
T Consensus 759 apVT~W~~ 766 (867)
T KOG2281|consen 759 APVTDWRL 766 (867)
T ss_pred Ccceeeee
Confidence 88888754
No 120
>KOG3079|consensus
Probab=39.52 E-value=17 Score=34.32 Aligned_cols=15 Identities=27% Similarity=0.603 Sum_probs=13.4
Q ss_pred CCCCEEEEecCCCCc
Q psy3706 107 SNAPVLLWLNAGLGS 121 (443)
Q Consensus 107 ~~~PlvlWlnGGPG~ 121 (443)
.+.|-|||.=|||||
T Consensus 5 ~~~~~IifVlGGPGs 19 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGS 19 (195)
T ss_pred ccCCCEEEEEcCCCC
Confidence 567889999999998
No 121
>PLN02310 triacylglycerol lipase
Probab=39.00 E-value=62 Score=34.16 Aligned_cols=65 Identities=6% Similarity=0.112 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHHHcccc-CCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 186 TQVGLNLYIALVQFFKVFNEY-QRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~-~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
..+.+++.+.+++..+.+++- ....+.|+|+|-||-..-..|..|.... ..+++.-+..|.|-+.
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI----PDLFVSVISFGAPRVG 250 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC----cCcceeEEEecCCCcc
Confidence 346677888888888777632 2346999999999998877776665422 1244556666666554
No 122
>PLN02934 triacylglycerol lipase
Probab=36.86 E-value=70 Score=34.73 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 189 GLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 189 a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
-.++...|+++.+.+|.+ +++|+|+|-||-..--.|..+..
T Consensus 304 y~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 345777788888888854 69999999999877776655543
No 123
>PRK14567 triosephosphate isomerase; Provisional
Probab=36.50 E-value=80 Score=31.17 Aligned_cols=63 Identities=11% Similarity=0.064 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhH
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYM 258 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q 258 (443)
.+.+++++.+++++...+-+-....+=|- |||---|.=+..|+.. -++.|++||.+-+||..-
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~-------~diDG~LVGgasL~~~~F 240 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL-------PDVDGGLIGGASLKAAEF 240 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC-------CCCCEEEeehhhhcHHHH
Confidence 56788889999999876522222233333 9999999999999863 368999999999998653
No 124
>PLN02408 phospholipase A1
Probab=36.14 E-value=61 Score=33.73 Aligned_cols=64 Identities=9% Similarity=0.121 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
.+.+++.+.+++..+.+|.. ...++|+|+|-||-..-..|..|.+.-.. .+ .++-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~--~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR-AP--MVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC-CC--ceEEEEcCCCCcc
Confidence 56778888899999988865 24699999999999888888887653211 11 2445555555544
No 125
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.96 E-value=47 Score=33.37 Aligned_cols=38 Identities=16% Similarity=0.268 Sum_probs=31.6
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccc
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQ 221 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~ 221 (443)
.-.++|+.|++++..-....|+=..=++|+.|||=|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 35778899999999999999987666799999997643
No 126
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=35.87 E-value=56 Score=34.82 Aligned_cols=40 Identities=13% Similarity=0.010 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhh
Q psy3706 185 KTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLG 227 (443)
Q Consensus 185 ~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la 227 (443)
.++..+++.+.+++.++..+ .+++.|.|+|-||-.+=.++
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHH
Confidence 34566778888888877654 57899999999997655444
No 127
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=35.48 E-value=1.4e+02 Score=26.38 Aligned_cols=64 Identities=13% Similarity=0.126 Sum_probs=40.4
Q ss_pred CceeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhc
Q psy3706 158 NHNVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQN 233 (443)
Q Consensus 158 ~anllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~ 233 (443)
...++-+|.| |.|.+- ....+.++.++.....+.. ..+ ..++.+.|+|.||.-.-.++..+.++
T Consensus 25 ~~~v~~~~~~-g~~~~~-----~~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 25 RRDVSALPLP-GFGPGE-----PLPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CccEEEecCC-CCCCCC-----CCCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 3567778866 444331 1223455555555555442 233 46899999999999888888877653
No 128
>KOG2564|consensus
Probab=35.33 E-value=52 Score=33.25 Aligned_cols=108 Identities=19% Similarity=0.324 Sum_probs=65.7
Q ss_pred CCCCCEEEEecCCCCchhh-ccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccccccCCCccccc
Q psy3706 106 PSNAPVLLWLNAGLGSSSM-TGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFSFAEDYDLYSRN 184 (443)
Q Consensus 106 ~~~~PlvlWlnGGPG~SSl-~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfSy~~~~~~~~~~ 184 (443)
...-|+++.+.|| |.|.| +..|.- .+... . ..-+|=+|-- |.|=+-.++.++ -+
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~----el~s~---------~--------~~r~~a~DlR-gHGeTk~~~e~d--lS 125 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFAS----ELKSK---------I--------RCRCLALDLR-GHGETKVENEDD--LS 125 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHH----HHHhh---------c--------ceeEEEeecc-ccCccccCChhh--cC
Confidence 4567899999977 66665 343321 01100 0 0112567743 888776665544 36
Q ss_pred hhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecC
Q psy3706 185 KTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGN 250 (443)
Q Consensus 185 ~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGN 250 (443)
.+..++|+...++.+|..-| -++.|.|+|-||-...+.|.. +.--+|-|+.+-+
T Consensus 126 ~eT~~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~--------k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAAS--------KTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhh--------hhchhhhceEEEE
Confidence 78899999999998884333 259999999999655333221 1123477776654
No 129
>PLN00413 triacylglycerol lipase
Probab=33.72 E-value=74 Score=34.25 Aligned_cols=40 Identities=13% Similarity=0.215 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 190 LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 190 ~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
.++.+.|++..+.+|++ +++|+|+|-||..+-..|..+..
T Consensus 268 y~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 268 YTILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 35677788888888844 69999999999988777766543
No 130
>PLN02847 triacylglycerol lipase
Probab=33.19 E-value=58 Score=36.04 Aligned_cols=71 Identities=7% Similarity=0.003 Sum_probs=43.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCC-ccChhh
Q psy3706 180 LYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGND-LTDPLY 257 (443)
Q Consensus 180 ~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG-~~dp~~ 257 (443)
|+...-..+.+.+...|++-++.+|.| ++.|+|+|.||--..-++..+ ..++ ..-+++.++.|-| ++++..
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilL-Re~~---~fssi~CyAFgPp~cvS~eL 296 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYIL-REQK---EFSSTTCVTFAPAACMTWDL 296 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHH-hcCC---CCCCceEEEecCchhcCHHH
Confidence 343333445555555666667778866 699999999998666665544 3222 1234667777753 555543
No 131
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=33.00 E-value=25 Score=24.29 Aligned_cols=12 Identities=17% Similarity=0.540 Sum_probs=6.5
Q ss_pred CCEEEEecCCCC
Q psy3706 109 APVLLWLNAGLG 120 (443)
Q Consensus 109 ~PlvlWlnGGPG 120 (443)
.--.||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999988
No 132
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=31.73 E-value=18 Score=25.50 Aligned_cols=18 Identities=0% Similarity=0.093 Sum_probs=15.2
Q ss_pred hhHHhhcCcHHHHHHhCC
Q psy3706 339 TLMVELFNTTTFRKAVHV 356 (443)
Q Consensus 339 ~~~~~yLN~pdVrkALHV 356 (443)
-.+..-|++||||++|++
T Consensus 14 ~gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 14 FGLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHHcCHHHHHHHHH
Confidence 356778999999999986
No 133
>PF11161 DUF2944: Protein of unknown function (DUF2946); InterPro: IPR021332 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=31.70 E-value=82 Score=29.64 Aligned_cols=47 Identities=26% Similarity=0.514 Sum_probs=34.0
Q ss_pred CCCCEEEEecC---CCCchhhccc-cccccceEEcCCCCCCCCcccccCcCccccCceeeEEecccccccc
Q psy3706 107 SNAPVLLWLNA---GLGSSSMTGL-FQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGRGFS 173 (443)
Q Consensus 107 ~~~PlvlWlnG---GPG~SSl~G~-f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGtGfS 173 (443)
+.+|.|+=|+- +-+-++-.|. +...--+.+++++. ||++.|.|.|.=
T Consensus 82 e~tP~v~Rl~~~~~~~~l~thTg~~~~~~~~~~lDe~G~--------------------l~l~t~~g~glv 132 (187)
T PF11161_consen 82 EYTPWVWRLQPEGGDLGLVTHTGAPFEAPRACWLDEQGR--------------------LYLATPLGVGLV 132 (187)
T ss_pred ccCceEEEeccCCCCCceeecCCCcccchhheeECCCCC--------------------EEEecCCceEEE
Confidence 78999999998 3344444555 33366677888777 999999998843
No 134
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=31.60 E-value=1.2e+02 Score=30.27 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHHHccc--c-CCCcEEEEecccccccchhhhHHHhhcCCCCcceee--eeeeEecCCccChhhH
Q psy3706 186 TQVGLNLYIALVQFFKVFNE--Y-QRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKIN--LKGFALGNDLTDPLYM 258 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe--~-~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iN--LkGi~IGNG~~dp~~q 258 (443)
...|..+.+.++.-.+..+. + .+.++.|+|.|=||+=. ..|.. ++. .-.+.++ |+|.+.|.+..|....
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~-l~~--~YApeL~~~l~Gaa~gg~~~dl~~~ 118 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAE-LAP--SYAPELNRDLVGAAAGGPPADLAAL 118 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHH-HhH--HhCcccccceeEEeccCCccCHHHH
Confidence 34445555555544444442 2 35789999999999743 22333 321 1235688 9999999998886543
No 135
>PLN03037 lipase class 3 family protein; Provisional
Probab=31.27 E-value=1.1e+02 Score=33.44 Aligned_cols=65 Identities=12% Similarity=0.224 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHcccc-CCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 187 QVGLNLYIALVQFFKVFNEY-QRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~-~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
.+.+++.+.+++..+.+++. ..-.++|+|+|-||-.+--.|..|....... .++.-+..|.|-+.
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~---~~VtvyTFGsPRVG 360 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPAL---SNISVISFGAPRVG 360 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCC---CCeeEEEecCCCcc
Confidence 45567778888888888753 2346999999999998877777776543211 13344555555443
No 136
>PRK11071 esterase YqiA; Provisional
Probab=31.04 E-value=55 Score=30.26 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChh
Q psy3706 192 LYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 192 ~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~ 256 (443)
..+++.++.+.. ..++++|.|.|.||.++-.+|... + .+ +++-|+..+|.
T Consensus 47 ~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~----~-------~~-~vl~~~~~~~~ 96 (190)
T PRK11071 47 AAELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCF----M-------LP-AVVVNPAVRPF 96 (190)
T ss_pred HHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHc----C-------CC-EEEECCCCCHH
Confidence 334445555543 346899999999999887777652 1 12 35567777764
No 137
>COG3596 Predicted GTPase [General function prediction only]
Probab=30.82 E-value=51 Score=33.09 Aligned_cols=59 Identities=27% Similarity=0.354 Sum_probs=37.2
Q ss_pred CCCCEEEEecC--CCCchhhc-cccc-cccceEEcCCCCCCCCcccccCcCcccc--CceeeEEecccccccc
Q psy3706 107 SNAPVLLWLNA--GLGSSSMT-GLFQ-ENGPLQLNKNKKRQPLPYVEKRKTYWSK--NHNVIYIDNPVGRGFS 173 (443)
Q Consensus 107 ~~~PlvlWlnG--GPG~SSl~-G~f~-E~GP~~v~~~~~~~~~~~l~~n~~sW~~--~anllyiDqPvGtGfS 173 (443)
+..|+.+.|-| |-|-||++ .+|. |.-|.....-+ ...-.+.|-. .-||..+|.| |.|=+
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~-------t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVG-------TDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecccC-------CCchhhHHhhccccceEEecCC-Ccccc
Confidence 67899999999 77779986 6773 23344322222 1222233433 3899999999 87744
No 138
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=29.13 E-value=72 Score=30.20 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=37.7
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhc
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQN 233 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~ 233 (443)
+.+..|+.+.+.|.+..+..+.- .+++-+.|+|-||-++=.....+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 45668888888888888777644 56899999999999887666655554
No 139
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=28.84 E-value=1.6e+02 Score=29.92 Aligned_cols=141 Identities=15% Similarity=0.128 Sum_probs=68.6
Q ss_pred CCceEEEEEeecCCCCCCCCEEEEecCCCCchhhc---cccccccceEEcCCCCCCCCcccccCcCccccCceeeEEecc
Q psy3706 91 YSSALFFWFFPAEEYPSNAPVLLWLNAGLGSSSMT---GLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNP 167 (443)
Q Consensus 91 ~~~~lFfwffes~~~~~~~PlvlWlnGGPG~SSl~---G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqP 167 (443)
.+..+.=|+..-++....-|.||-+.|..|.+... -.+...|=..+..+..+.+. ....... ...+
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~--~~~d~~~---------~~~~ 133 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGG--RSPDYRG---------SSGG 133 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSS--SS-B-SS---------BSSS
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCC--CCCCccc---------cCCC
Confidence 35566667776665567899999999987775432 12444554444333221100 0000000 0112
Q ss_pred cccccccccCCCccccc--hhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeee
Q psy3706 168 VGRGFSFAEDYDLYSRN--KTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKG 245 (443)
Q Consensus 168 vGtGfSy~~~~~~~~~~--~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkG 245 (443)
..-|+-.....+. ..+ -..+..|.+.++ .|....|+.-.+.+.++|+|-||...-.+|. + + + .++.
T Consensus 134 ~~~g~~~~g~~~~-~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-L-d--~------rv~~ 201 (320)
T PF05448_consen 134 TLKGHITRGIDDN-PEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-L-D--P------RVKA 201 (320)
T ss_dssp -SSSSTTTTTTS--TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-H-S--S------T-SE
T ss_pred CCccHHhcCccCc-hHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-h-C--c------cccE
Confidence 2223322111100 000 112334445444 4667789998889999999999976555544 2 2 1 3788
Q ss_pred eEecCCccC
Q psy3706 246 FALGNDLTD 254 (443)
Q Consensus 246 i~IGNG~~d 254 (443)
++...|++.
T Consensus 202 ~~~~vP~l~ 210 (320)
T PF05448_consen 202 AAADVPFLC 210 (320)
T ss_dssp EEEESESSS
T ss_pred EEecCCCcc
Confidence 888877553
No 140
>PLN02802 triacylglycerol lipase
Probab=27.68 E-value=94 Score=33.75 Aligned_cols=64 Identities=8% Similarity=0.110 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccC
Q psy3706 187 QVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTD 254 (443)
Q Consensus 187 ~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~d 254 (443)
.+.+++.+.++.+.+.+|.. .-.++|+|+|-||-..-..|..|...... .+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~---~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPA---APPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCC---CCceEEEEcCCCCcc
Confidence 56678888888888888743 23699999999999888888887654321 123445555655544
No 141
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.66 E-value=86 Score=30.90 Aligned_cols=97 Identities=20% Similarity=0.192 Sum_probs=54.7
Q ss_pred ceeeEEecccccccccccCCCccccchhH-HHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCC-
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQ-VGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPV- 236 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~-~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~- 236 (443)
..||-.|-- |+|=|-....++....-.+ +-.|+-.+|.+-=+.-| ..|.|..|+||||+-+=-++.+= +.+..
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~~~-k~~a~~ 132 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQHP-KYAAFA 132 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccccCc-ccceee
Confidence 345666644 7776655544444444333 33456555555545555 56999999999999755444432 11110
Q ss_pred ---------C--cceeeeeeeEecCCccChhhHHH
Q psy3706 237 ---------T--DIKINLKGFALGNDLTDPLYMML 260 (443)
Q Consensus 237 ---------~--~~~iNLkGi~IGNG~~dp~~q~~ 260 (443)
+ ...-.|+-+.++|-..-|.+-..
T Consensus 133 vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~ 167 (281)
T COG4757 133 VFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWK 167 (281)
T ss_pred Eeccccccccchhhhhcccceeeccccccchhhcc
Confidence 0 12245667777776666655444
No 142
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=27.49 E-value=1.5e+02 Score=34.12 Aligned_cols=46 Identities=22% Similarity=0.094 Sum_probs=32.5
Q ss_pred chhHHHHHHHHHHHHHH------H---HccccCCCcEEEEecccccccchhhhHH
Q psy3706 184 NKTQVGLNLYIALVQFF------K---VFNEYQRNDFFITGETYIGQFGTSLGFN 229 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff------~---~fpe~~~~~~yi~GESYaG~yvP~la~~ 229 (443)
+.++...|+.......= + .+..+...++++.|+|-||.-...++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 56888888876554432 1 2334557799999999999988777743
No 143
>PRK14566 triosephosphate isomerase; Provisional
Probab=27.21 E-value=1.1e+02 Score=30.25 Aligned_cols=62 Identities=10% Similarity=0.143 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhh
Q psy3706 186 TQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLY 257 (443)
Q Consensus 186 ~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~ 257 (443)
.+.|++++.|+++++...-+...+.+=|- |||---|.=+..|+.. -++.|++||..-+||..
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~dIDG~LVGgASL~~~~ 249 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ-------PDVDGGLIGGASLNSTE 249 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEechHhcCHHH
Confidence 45578999999999865422222233343 9999999999999863 36899999999999865
No 144
>KOG2984|consensus
Probab=26.63 E-value=1.9e+02 Score=27.97 Aligned_cols=114 Identities=17% Similarity=0.101 Sum_probs=64.5
Q ss_pred ceeeEEecccccccccccCCC---ccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCC
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYD---LYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNP 235 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~---~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~ 235 (443)
..|+=+| |-|-|=|...+.. .+...+.+.|-|+.++| +-.+|-|.|-|=||.-.-..|.+--
T Consensus 72 ~TivawD-PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL----------k~~~fsvlGWSdGgiTalivAak~~---- 136 (277)
T KOG2984|consen 72 VTIVAWD-PPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL----------KLEPFSVLGWSDGGITALIVAAKGK---- 136 (277)
T ss_pred eEEEEEC-CCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh----------CCCCeeEeeecCCCeEEEEeeccCh----
Confidence 5688899 6699988654321 12346777888888887 3458999999999986544443321
Q ss_pred CCcceeeeeeeEecCCccChhhHHH---HHHHHH-----hcCCCChhhHHHHHHHHHHHHHHH
Q psy3706 236 VTDIKINLKGFALGNDLTDPLYMML---YSKYLY-----QIGLIDDNGRKLFEYKEKQITDLI 290 (443)
Q Consensus 236 ~~~~~iNLkGi~IGNG~~dp~~q~~---y~~f~y-----~~GLId~~~~~~~~~~~~~~~~~i 290 (443)
.++|=--|.-++..++-+..+. .-|-.- ...+.+....+.+.+.|+...+.+
T Consensus 137 ---e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v 196 (277)
T KOG2984|consen 137 ---EKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVV 196 (277)
T ss_pred ---hhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHH
Confidence 1333333444455555443322 111111 112334445666777666554433
No 145
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=26.49 E-value=1.2e+02 Score=29.95 Aligned_cols=64 Identities=8% Similarity=0.243 Sum_probs=37.6
Q ss_pred chhHHHHHHHHHHHHHH-HHcc-----ccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 184 NKTQVGLNLYIALVQFF-KVFN-----EYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff-~~fp-----e~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
.+.+.++.+.++|.+=+ ...| .+ ..+.|+|+|=||+-+ ++..+ ++......+++|+++.-+|.=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~A--f~~al--~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVA--FAMAL--GNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHH--HHHHh--hhcccccccceeEEEEecccc
Confidence 45666667666665511 2233 22 259999999999933 22222 222233457888888776654
No 146
>PRK06762 hypothetical protein; Provisional
Probab=26.12 E-value=40 Score=30.01 Aligned_cols=21 Identities=24% Similarity=0.438 Sum_probs=15.4
Q ss_pred CEEEEecCCCCc--hhhcccccc
Q psy3706 110 PVLLWLNAGLGS--SSMTGLFQE 130 (443)
Q Consensus 110 PlvlWlnGGPG~--SSl~G~f~E 130 (443)
|.+||+.|.||| |.+...+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 789999999988 445554443
No 147
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=25.73 E-value=1.2e+02 Score=20.95 Aligned_cols=28 Identities=11% Similarity=0.266 Sum_probs=14.0
Q ss_pred ceEEEEEeecCCCCCCCCEEEEecCCCC
Q psy3706 93 SALFFWFFPAEEYPSNAPVLLWLNAGLG 120 (443)
Q Consensus 93 ~~lFfwffes~~~~~~~PlvlWlnGGPG 120 (443)
.+-+|||-.+........--+|+.+||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEEeCCC
Confidence 4667777444433333334444444553
No 148
>PRK04940 hypothetical protein; Provisional
Probab=25.36 E-value=1.4e+02 Score=28.02 Aligned_cols=40 Identities=20% Similarity=0.174 Sum_probs=31.7
Q ss_pred CcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhHHH
Q psy3706 209 NDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYMML 260 (443)
Q Consensus 209 ~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q~~ 260 (443)
.+..|.|-|=||-|.-.+|.+- .+|.| +-||.+.|...+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-----------g~~aV-LiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-----------GIRQV-IFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-----------CCCEE-EECCCCChHHHHH
Confidence 4689999999999998888863 45655 4589999977655
No 149
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=25.33 E-value=91 Score=28.75 Aligned_cols=83 Identities=11% Similarity=0.077 Sum_probs=52.7
Q ss_pred eeeEEecccccccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCC-CCc
Q psy3706 160 NVIYIDNPVGRGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNP-VTD 238 (443)
Q Consensus 160 nllyiDqPvGtGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~-~~~ 238 (443)
.+--|+-|+..+.. .|..+..+.+.++...++++..+-| +.+|.|+|-|=|+.-+-.+... .. ...
T Consensus 41 ~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~~~ 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLPPD 107 (179)
T ss_dssp EEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSSHH
T ss_pred EEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCChh
Confidence 34447788887763 2555788888999999999999999 5689999999999755544444 11 112
Q ss_pred ceeeeee-eEecCCccCh
Q psy3706 239 IKINLKG-FALGNDLTDP 255 (443)
Q Consensus 239 ~~iNLkG-i~IGNG~~dp 255 (443)
..=++.+ +.+|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 2234555 5888887653
No 150
>KOG4569|consensus
Probab=24.29 E-value=1.3e+02 Score=30.64 Aligned_cols=59 Identities=14% Similarity=0.294 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCcc
Q psy3706 190 LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLT 253 (443)
Q Consensus 190 ~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~ 253 (443)
..+.+-++....++| +..++|||+|=||-...-.|..|...... ....++=+--|-|-+
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCc
Confidence 445555555566777 55899999999999999999999875432 234445555555444
No 151
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=23.76 E-value=44 Score=31.06 Aligned_cols=35 Identities=23% Similarity=0.483 Sum_probs=20.5
Q ss_pred CCCCCEEEEecCCCCc--hhhcccccc----ccceEEcCCC
Q psy3706 106 PSNAPVLLWLNAGLGS--SSMTGLFQE----NGPLQLNKNK 140 (443)
Q Consensus 106 ~~~~PlvlWlnGGPG~--SSl~G~f~E----~GP~~v~~~~ 140 (443)
+...|+++.+-|+||| |++...+.+ -|...|+.|.
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~~~~~~~~~~~~~~v~i~~D~ 51 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTLARQLLEEFGGGGIVVIDADE 51 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHHHHHHHHHT-TT-SEEE-GGG
T ss_pred cccCCEEEEEeCCCCCCHHHHHHHhhhhccCCCeEEEehHH
Confidence 6789999999999998 666544443 2556666653
No 152
>PLN02162 triacylglycerol lipase
Probab=23.36 E-value=1.5e+02 Score=31.86 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhh
Q psy3706 190 LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQ 232 (443)
Q Consensus 190 ~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~ 232 (443)
..+.+.|+.+...+|+ .+++|||+|-||-..--.|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 3455666777777774 469999999999876666555543
No 153
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=22.81 E-value=50 Score=31.18 Aligned_cols=56 Identities=14% Similarity=0.040 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChh
Q psy3706 188 VGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPL 256 (443)
Q Consensus 188 ~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~ 256 (443)
+.+++..+|++ .|+-...+ ..|+|.|.||.-+-.++.+- + =-+.+++.-.|.+++.
T Consensus 98 l~~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~----P-----d~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRH----P-----DLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHS----T-----TTESEEEEESEESETT
T ss_pred hhccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhC----c-----cccccccccCcccccc
Confidence 34444444443 34433344 89999999997555444431 1 2478888888887776
No 154
>PRK13604 luxD acyl transferase; Provisional
Probab=21.55 E-value=2e+02 Score=29.29 Aligned_cols=126 Identities=12% Similarity=0.089 Sum_probs=69.8
Q ss_pred CceEEEEEeecCC-CCCCCCEEEEecCCCCchhhccccccccceEEcCCCCCCCCcccccCcCccccCceeeEEeccccc
Q psy3706 92 SSALFFWFFPAEE-YPSNAPVLLWLNAGLGSSSMTGLFQENGPLQLNKNKKRQPLPYVEKRKTYWSKNHNVIYIDNPVGR 170 (443)
Q Consensus 92 ~~~lFfwffes~~-~~~~~PlvlWlnGGPG~SSl~G~f~E~GP~~v~~~~~~~~~~~l~~n~~sW~~~anllyiDqPvGt 170 (443)
+..|.=|+.+.++ ++...|+||-.. |.|+.... + ...-.+=+.+-.++|-.|.=-|.
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~--------~-------------~~~A~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMDH--------F-------------AGLAEYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHH--------H-------------HHHHHHHHHCCCEEEEecCCCCC
Confidence 5678888888763 356667777655 55554210 1 12222233456788888866556
Q ss_pred ccccccCCCccccchhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecC
Q psy3706 171 GFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGN 250 (443)
Q Consensus 171 GfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGN 250 (443)
|=|-++-. +...+. -.+|+..++ .|.+.. ...+++|.|+|-||--+...|. ..+++++++..
T Consensus 77 GeS~G~~~-~~t~s~--g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~s 138 (307)
T PRK13604 77 GLSSGTID-EFTMSI--GKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVIN-----------EIDLSFLITAV 138 (307)
T ss_pred CCCCCccc-cCcccc--cHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcC
Confidence 76622111 111111 134443332 233332 2357999999999975322221 12489999999
Q ss_pred CccChhh
Q psy3706 251 DLTDPLY 257 (443)
Q Consensus 251 G~~dp~~ 257 (443)
|+.+-..
T Consensus 139 p~~~l~d 145 (307)
T PRK13604 139 GVVNLRD 145 (307)
T ss_pred CcccHHH
Confidence 9998543
No 155
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=21.24 E-value=1.2e+02 Score=28.22 Aligned_cols=64 Identities=9% Similarity=-0.077 Sum_probs=38.1
Q ss_pred cCceeeEEecccc--cccccccCCCccccchhHHHHHHHHHHHHHHHHc-cccCCCcEEEEecccccccchhhhH
Q psy3706 157 KNHNVIYIDNPVG--RGFSFAEDYDLYSRNKTQVGLNLYIALVQFFKVF-NEYQRNDFFITGETYIGQFGTSLGF 228 (443)
Q Consensus 157 ~~anllyiDqPvG--tGfSy~~~~~~~~~~~~~~a~d~~~fL~~Ff~~f-pe~~~~~~yi~GESYaG~yvP~la~ 228 (443)
+.+-|.|++..+. ...+-.. ..--+..|.+|-.|+...=... | .-.+-+.|+|||..-+=..+.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~-----~~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~ 128 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS-----PGYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQ 128 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC-----chHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhh
Confidence 6778888865554 2222111 1123566667777776665544 2 336889999999875544433
No 156
>COG4425 Predicted membrane protein [Function unknown]
Probab=21.06 E-value=1.1e+02 Score=32.71 Aligned_cols=38 Identities=13% Similarity=0.301 Sum_probs=32.7
Q ss_pred chhHHHHHHHHHHHHHHHHccccCCCcEEEEecccccc
Q psy3706 184 NKTQVGLNLYIALVQFFKVFNEYQRNDFFITGETYIGQ 221 (443)
Q Consensus 184 ~~~~~a~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~ 221 (443)
.-.++|+.++++.-......|+=+.-++|+.|||-|..
T Consensus 372 yg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 372 YGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred cchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 35688999999999999999988777899999998753
No 157
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=20.59 E-value=1.4e+02 Score=30.17 Aligned_cols=78 Identities=12% Similarity=-0.053 Sum_probs=45.0
Q ss_pred ceeeEEecccccccccccCCCccccchhHHH-HHHHHHHHHHHHHccccCCCcEEEEecccccccchhhhHHHhhcCCCC
Q psy3706 159 HNVIYIDNPVGRGFSFAEDYDLYSRNKTQVG-LNLYIALVQFFKVFNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVT 237 (443)
Q Consensus 159 anllyiDqPvGtGfSy~~~~~~~~~~~~~~a-~d~~~fL~~Ff~~fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~ 237 (443)
.+++=+|.. |-|.|-. ..+.++.+ +++-+++....+..+ ..++++.|+|.||..+-.++.. .+
T Consensus 95 ~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~----~~-- 158 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAAL----YP-- 158 (350)
T ss_pred CeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHh----Cc--
Confidence 567777864 4443311 11333433 345555555555554 4689999999999865444322 11
Q ss_pred cceeeeeeeEecCCccCh
Q psy3706 238 DIKINLKGFALGNDLTDP 255 (443)
Q Consensus 238 ~~~iNLkGi~IGNG~~dp 255 (443)
-.++++++-++.+|.
T Consensus 159 ---~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 159 ---DKIKNLVTMVTPVDF 173 (350)
T ss_pred ---hheeeEEEecccccc
Confidence 136777777776664
No 158
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=20.22 E-value=1.3e+02 Score=31.69 Aligned_cols=37 Identities=24% Similarity=0.584 Sum_probs=26.9
Q ss_pred ceeEeeEEEeeccCCCCCCceEEEEEeecCCCCCCCCEE-EEecC
Q psy3706 74 IESYSGFFRVNSTEDKKYSSALFFWFFPAEEYPSNAPVL-LWLNA 117 (443)
Q Consensus 74 ~~~ysGyl~V~~~~~~~~~~~lFfwffes~~~~~~~Plv-lWlnG 117 (443)
...-+|||+. |++ ++|.+ ..|+.-...+-||| +||.|
T Consensus 198 ~~~k~GfLTm----Dqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 198 GTYKSGFLTM----DQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccccceeeE----ccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 4456999999 764 56777 77776555676876 88885
No 159
>PLN02429 triosephosphate isomerase
Probab=20.03 E-value=1.8e+02 Score=29.61 Aligned_cols=64 Identities=16% Similarity=0.190 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHHHHHHHH-ccccCCCcEEEEecccccccchhhhHHHhhcCCCCcceeeeeeeEecCCccChhhH
Q psy3706 185 KTQVGLNLYIALVQFFKV-FNEYQRNDFFITGETYIGQFGTSLGFNIYQNNPVTDIKINLKGFALGNDLTDPLYM 258 (443)
Q Consensus 185 ~~~~a~d~~~fL~~Ff~~-fpe~~~~~~yi~GESYaG~yvP~la~~I~~~n~~~~~~iNLkGi~IGNG~~dp~~q 258 (443)
..+.++.+..++++|+.. +.+-....+-|- |||---|.-+..|... -++.|++||.+.+++..-
T Consensus 237 s~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~-------~diDG~LVGgASL~~~~F 301 (315)
T PLN02429 237 SPQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE-------EDIDGFLVGGASLKGPEF 301 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC-------CCCCEEEeecceecHHHH
Confidence 345678888999998854 443323344444 9999999999888763 478999999999987653
Done!