RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3708
         (240 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 78.9 bits (193), Expect = 3e-18
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 73  VQFRTWARRDVIDQVDFAAEAGPEFLNFFERYFNIRYPLPKQDMVAIPSLSA-------L 125
            +   W+ ++ +++  +        L   E      Y   + D++ +P            
Sbjct: 8   PRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENPC 66

Query: 126 LFDDVRSSIHNEYSIANTIAHELAHQWFGNLVTMKWWTDLWLNEGFATYMAAQALNDVH 184
           L     + +  + S++N IAH+++H W GNLVT K W   WLNEG   Y+       + 
Sbjct: 67  LTFVTPTLLAGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLF 125



 Score = 50.4 bits (119), Expect = 4e-08
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 190 QVDFAAEAGPEFLNFFERYFNIRYPLPKQDMVAI-PDFSAGAMENWGLITYR 240
           +  +        L   E      Y   + D++ + P F  G MEN  L    
Sbjct: 21  KSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENPCLTFVT 71


>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 58.7 bits (141), Expect = 3e-11
 Identities = 13/55 (23%), Positives = 27/55 (49%)

Query: 1   MKSTFTISLGHPKKLTSISNMPLERSEDISTKPGWVLDVFQKSVPMSTYLVAFII 55
           +K T+T  +  PK+L ++ +   +        P   +  F + VP+  YL+A ++
Sbjct: 152 VKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVV 206


>d1kufa_ d.92.1.9 (A:) Snake venom metalloprotease {Taiwan habu
           (Trimeresurus mucrosquamatus), atrolysin E [TaxId:
           103944]}
          Length = 201

 Score = 25.1 bits (54), Expect = 6.3
 Identities = 16/116 (13%), Positives = 37/116 (31%), Gaps = 7/116 (6%)

Query: 37  LDVFQKSVPMSTYLVAFIISDFTFRQSNTSNPDLSRVQFRTWARRDVIDQVDFAAEAGPE 96
           ++   + + ++  L    +       +  ++   +   F  W  R ++ + +        
Sbjct: 40  INEMCRPLNIAITLALLDVWSEKDFITVQADAPTTAGLFGDWRERVLLKKKNHDHAQLLT 99

Query: 97  FLNFFERYFNIRYPLPKQDMVAIPSLSALLFDDVRSSIHNEYSIANTIAHELAHQW 152
             NF        Y       +     S  +  D  S +   + +A T+ HEL H  
Sbjct: 100 DTNFARNTIGWAYV----GRMCDEKYSVAVVKDHSSKV---FMVAVTMTHELGHNL 148


>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 203

 Score = 24.7 bits (53), Expect = 8.9
 Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 8/116 (6%)

Query: 37  LDVFQKSVPMSTYLVAFIISDFTFRQSNTSNPDLSRVQFRTWARRDVIDQVDFAAEAGPE 96
           +D   +++ +   L    +     R   T + + +   F  W RR +  Q    +     
Sbjct: 37  VDQLLRTLDIQVALTGLEVWTERDRSRVTQDANATLWAFLQW-RRGLWAQRPHDSAQLLT 95

Query: 97  FLNFFERYFNIRYPLPKQDMVAIPSLSALLFDDVRSSIHNEYSIANTIAHELAHQW 152
              F      +       + +     S  +  D           A T+AHE+ H  
Sbjct: 96  GRAFQGATVGLAPV----EGMCRAESSGGVSTDHS---ELPIGAAATMAHEIGHSL 144


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 933,186
Number of extensions: 42123
Number of successful extensions: 131
Number of sequences better than 10.0: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 9
Length of query: 240
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 157
Effective length of database: 1,268,006
Effective search space: 199076942
Effective search space used: 199076942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 51 (24.2 bits)