Query psy3710
Match_columns 424
No_of_seqs 777 out of 2128
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 23:34:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 8.9E-53 3E-57 399.9 47.5 402 5-421 54-555 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 2.9E-49 9.9E-54 374.8 52.1 395 4-421 10-486 (577)
3 1nr0_A Actin interacting prote 100.0 3E-50 1E-54 382.6 42.4 355 4-394 141-610 (611)
4 2ymu_A WD-40 repeat protein; u 100.0 2E-48 6.9E-53 369.0 48.4 368 6-421 176-568 (577)
5 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-48 8.2E-53 382.2 37.8 398 5-421 12-649 (902)
6 3sfz_A APAF-1, apoptotic pepti 100.0 7.6E-48 2.6E-52 395.6 41.6 399 6-421 611-1197(1249)
7 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-45 4.7E-50 378.9 40.6 391 4-421 651-1237(1249)
8 1pgu_A Actin interacting prote 100.0 3.9E-45 1.3E-49 349.1 40.4 402 4-421 57-602 (615)
9 3mkq_A Coatomer beta'-subunit; 100.0 7.6E-45 2.6E-49 358.2 43.3 398 5-420 8-486 (814)
10 1vyh_C Platelet-activating fac 100.0 5.6E-45 1.9E-49 329.6 37.1 280 5-300 103-410 (410)
11 1got_B GT-beta; complex (GTP-b 100.0 1.3E-44 4.5E-49 319.2 38.3 278 5-298 50-340 (340)
12 3ow8_A WD repeat-containing pr 100.0 2.2E-44 7.6E-49 314.6 35.9 280 5-300 27-320 (321)
13 1pgu_A Actin interacting prote 100.0 1.9E-43 6.5E-48 337.5 42.0 395 6-421 14-560 (615)
14 2ynn_A Coatomer subunit beta'; 100.0 3.6E-43 1.2E-47 305.0 39.6 282 5-301 8-302 (304)
15 2pbi_B Guanine nucleotide-bind 100.0 1.3E-43 4.4E-48 314.3 36.0 278 5-298 59-354 (354)
16 2oaj_A Protein SNI1; WD40 repe 100.0 6E-43 2E-47 344.0 39.2 353 7-393 55-659 (902)
17 4ery_A WD repeat-containing pr 100.0 3E-42 1E-46 300.8 38.2 281 5-300 18-311 (312)
18 4gqb_B Methylosome protein 50; 100.0 8E-43 2.7E-47 306.9 34.4 282 6-303 26-333 (344)
19 4g56_B MGC81050 protein; prote 100.0 5.9E-43 2E-47 310.3 33.4 282 6-303 38-345 (357)
20 1r5m_A SIR4-interacting protei 100.0 8.4E-43 2.9E-47 317.7 35.2 339 7-394 42-424 (425)
21 3iz6_a 40S ribosomal protein R 100.0 1.2E-43 4.2E-48 317.8 28.9 288 5-304 61-378 (380)
22 1vyh_C Platelet-activating fac 100.0 1.2E-42 4E-47 314.4 35.3 270 47-393 104-409 (410)
23 1got_B GT-beta; complex (GTP-b 100.0 3.9E-42 1.3E-46 303.4 37.8 270 46-392 50-340 (340)
24 3ow8_A WD repeat-containing pr 100.0 2.3E-42 7.8E-47 301.8 35.7 271 47-394 28-320 (321)
25 3iz6_a 40S ribosomal protein R 100.0 6.5E-43 2.2E-47 313.1 31.5 292 80-395 46-375 (380)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.7E-42 1.6E-46 303.4 35.4 293 3-308 8-342 (345)
27 3frx_A Guanine nucleotide-bind 100.0 7.5E-42 2.6E-46 298.7 35.4 282 4-302 11-318 (319)
28 4gqb_B Methylosome protein 50; 100.0 4.7E-42 1.6E-46 302.0 34.1 290 33-395 16-331 (344)
29 2pbi_B Guanine nucleotide-bind 100.0 3.4E-41 1.2E-45 298.7 38.4 272 45-392 58-354 (354)
30 4g56_B MGC81050 protein; prote 100.0 3.2E-42 1.1E-46 305.5 31.0 308 15-333 10-345 (357)
31 2xzm_R RACK1; ribosome, transl 100.0 3.5E-41 1.2E-45 297.7 35.3 284 4-303 15-342 (343)
32 1gxr_A ESG1, transducin-like e 100.0 2.4E-41 8.1E-46 298.4 33.6 305 8-330 7-336 (337)
33 2pm9_A Protein WEB1, protein t 100.0 1.7E-42 5.9E-47 314.9 27.0 339 52-395 13-414 (416)
34 2ynn_A Coatomer subunit beta'; 100.0 7.9E-41 2.7E-45 290.3 36.2 273 92-394 5-301 (304)
35 3zwl_B Eukaryotic translation 100.0 6.6E-41 2.3E-45 299.4 36.1 291 4-306 26-351 (369)
36 4ery_A WD repeat-containing pr 100.0 3.2E-40 1.1E-44 288.0 37.8 273 92-394 15-311 (312)
37 3vl1_A 26S proteasome regulato 100.0 2.2E-41 7.7E-46 308.0 31.6 314 53-394 58-418 (420)
38 4aow_A Guanine nucleotide-bind 100.0 1.4E-40 4.7E-45 294.0 35.3 284 5-303 33-339 (340)
39 1erj_A Transcriptional repress 100.0 9.8E-41 3.4E-45 300.3 34.9 278 7-301 61-389 (393)
40 3frx_A Guanine nucleotide-bind 100.0 3.5E-40 1.2E-44 288.2 35.4 278 46-394 12-316 (319)
41 2hes_X YDR267CP; beta-propelle 100.0 9.6E-41 3.3E-45 293.1 31.7 282 4-301 8-328 (330)
42 3vu4_A KMHSV2; beta-propeller 100.0 3.8E-40 1.3E-44 292.1 35.8 306 5-397 14-338 (355)
43 4a11_B DNA excision repair pro 100.0 1E-39 3.5E-44 295.8 37.8 313 5-331 38-405 (408)
44 2pm9_A Protein WEB1, protein t 100.0 6.2E-42 2.1E-46 311.2 23.1 310 8-332 10-415 (416)
45 1erj_A Transcriptional repress 100.0 1.1E-39 3.6E-44 293.6 36.9 274 94-394 59-388 (393)
46 3mkq_A Coatomer beta'-subunit; 100.0 1.9E-39 6.4E-44 319.8 41.7 359 46-421 8-411 (814)
47 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-39 4E-44 288.1 35.6 288 91-396 6-336 (345)
48 3vl1_A 26S proteasome regulato 100.0 1.5E-40 5.2E-45 302.5 29.3 305 11-331 57-419 (420)
49 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.5E-39 1.2E-43 295.5 38.5 311 5-396 113-443 (445)
50 1gxr_A ESG1, transducin-like e 100.0 4.2E-39 1.4E-43 284.0 36.6 309 50-394 8-336 (337)
51 3dm0_A Maltose-binding peripla 100.0 7.4E-39 2.5E-43 309.3 36.4 301 5-394 377-692 (694)
52 4e54_B DNA damage-binding prot 100.0 5.3E-40 1.8E-44 299.7 26.6 286 6-305 115-434 (435)
53 2j04_B YDR362CP, TAU91; beta p 100.0 5.3E-40 1.8E-44 302.9 26.4 325 8-394 131-516 (524)
54 4aow_A Guanine nucleotide-bind 100.0 4.2E-38 1.4E-42 278.1 36.6 302 26-395 8-337 (340)
55 2xzm_R RACK1; ribosome, transl 100.0 3.9E-38 1.3E-42 278.2 36.2 282 92-394 13-339 (343)
56 3v7d_B Cell division control p 100.0 8E-38 2.7E-42 288.3 38.8 305 5-394 116-462 (464)
57 1k8k_C P40, ARP2/3 complex 41 100.0 8.2E-39 2.8E-43 286.2 31.1 321 6-398 4-364 (372)
58 1sq9_A Antiviral protein SKI8; 100.0 1.2E-38 4.2E-43 287.7 31.7 281 5-302 11-396 (397)
59 2hes_X YDR267CP; beta-propelle 100.0 3.8E-38 1.3E-42 276.6 33.7 279 43-394 6-327 (330)
60 3ei3_B DNA damage-binding prot 100.0 3.6E-38 1.2E-42 283.2 34.1 277 5-301 68-382 (383)
61 3i2n_A WD repeat-containing pr 100.0 7.5E-39 2.6E-43 284.8 29.1 287 6-304 14-356 (357)
62 3gre_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 293.0 28.9 331 7-392 60-437 (437)
63 1r5m_A SIR4-interacting protei 100.0 1.3E-37 4.4E-42 283.4 33.1 276 8-300 106-424 (425)
64 3ei3_B DNA damage-binding prot 100.0 1.3E-37 4.5E-42 279.6 30.5 277 45-394 67-381 (383)
65 3zwl_B Eukaryotic translation 100.0 3.1E-36 1E-40 269.1 39.0 293 47-395 28-346 (369)
66 3k26_A Polycomb protein EED; W 100.0 1.8E-37 6.3E-42 276.8 30.6 279 6-301 14-366 (366)
67 4aez_A CDC20, WD repeat-contai 100.0 2.7E-37 9.3E-42 279.0 31.5 287 7-308 88-387 (401)
68 4gga_A P55CDC, cell division c 100.0 1.8E-36 6.1E-41 275.2 37.1 282 12-307 107-401 (420)
69 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-36 4.1E-41 265.5 33.6 282 4-309 12-304 (313)
70 3i2n_A WD repeat-containing pr 100.0 9.9E-37 3.4E-41 271.1 33.2 305 48-394 15-352 (357)
71 4e54_B DNA damage-binding prot 100.0 2.5E-37 8.6E-42 282.1 30.0 275 48-395 116-430 (435)
72 4a11_B DNA excision repair pro 100.0 8.8E-37 3E-41 276.5 30.4 300 33-395 25-365 (408)
73 4ggc_A P55CDC, cell division c 100.0 1.7E-35 5.7E-40 258.9 37.3 277 13-303 28-317 (318)
74 2pm7_B Protein transport prote 100.0 1.6E-36 5.5E-41 262.3 29.8 249 4-300 3-284 (297)
75 2j04_A TAU60, YPL007P, hypothe 100.0 1.9E-38 6.7E-43 285.2 17.5 314 6-384 11-350 (588)
76 1sq9_A Antiviral protein SKI8; 100.0 1.1E-35 3.7E-40 268.4 35.6 300 47-394 12-394 (397)
77 4h5i_A Guanine nucleotide-exch 100.0 8E-36 2.7E-40 265.1 33.9 281 51-396 14-344 (365)
78 3k26_A Polycomb protein EED; W 100.0 6.3E-37 2.2E-41 273.3 26.7 302 47-394 14-365 (366)
79 3dwl_C Actin-related protein 2 100.0 1.3E-37 4.6E-42 278.9 20.3 236 6-256 7-280 (377)
80 4h5i_A Guanine nucleotide-exch 100.0 2.9E-36 9.9E-41 268.0 28.6 282 10-302 14-344 (365)
81 3dw8_B Serine/threonine-protei 100.0 7.8E-36 2.7E-40 273.7 30.0 278 7-300 25-445 (447)
82 4aez_A CDC20, WD repeat-contai 100.0 3.5E-35 1.2E-39 265.1 33.2 263 58-337 98-386 (401)
83 4gga_A P55CDC, cell division c 100.0 7E-35 2.4E-39 264.8 34.9 264 102-395 108-395 (420)
84 3v7d_B Cell division control p 100.0 2.8E-34 9.4E-39 264.6 39.1 275 47-401 117-426 (464)
85 3bg1_A Protein SEC13 homolog; 100.0 4.1E-36 1.4E-40 262.0 24.9 246 6-300 9-292 (316)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-34 5.7E-39 264.5 36.2 291 47-421 114-426 (445)
87 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-34 8.5E-39 250.8 35.0 266 91-395 9-296 (313)
88 4ggc_A P55CDC, cell division c 100.0 2.3E-34 7.8E-39 251.6 32.8 265 54-394 28-314 (318)
89 3dwl_C Actin-related protein 2 100.0 4.8E-36 1.7E-40 268.8 22.4 240 47-301 7-281 (377)
90 3f3f_A Nucleoporin SEH1; struc 100.0 4.1E-35 1.4E-39 259.6 27.9 291 5-308 6-344 (351)
91 2pm7_B Protein transport prote 100.0 3.2E-34 1.1E-38 247.8 32.6 242 134-397 4-287 (297)
92 2j04_B YDR362CP, TAU91; beta p 100.0 1E-35 3.5E-40 274.4 24.1 278 6-301 203-517 (524)
93 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-34 7E-39 263.0 32.2 274 7-307 130-420 (435)
94 2j04_A TAU60, YPL007P, hypothe 100.0 1.7E-36 5.8E-41 272.7 17.3 297 51-422 15-350 (588)
95 3dw8_B Serine/threonine-protei 100.0 2.2E-34 7.4E-39 264.1 31.3 240 50-305 27-377 (447)
96 3jrp_A Fusion protein of prote 100.0 2.2E-34 7.6E-39 258.0 27.8 256 3-306 4-292 (379)
97 3bg1_A Protein SEC13 homolog; 100.0 8E-35 2.7E-39 253.8 23.9 261 135-424 9-316 (316)
98 1yfq_A Cell cycle arrest prote 100.0 2.8E-34 9.5E-39 253.8 27.7 272 1-292 1-315 (342)
99 1l0q_A Surface layer protein; 100.0 3.2E-32 1.1E-36 245.2 40.3 325 78-421 10-366 (391)
100 3mmy_A MRNA export factor; mRN 100.0 9.4E-34 3.2E-38 252.9 29.8 277 4-298 33-343 (368)
101 1l0q_A Surface layer protein; 100.0 2.9E-32 1E-36 245.4 39.4 269 23-308 3-282 (391)
102 3gre_A Serine/threonine-protei 100.0 6.6E-34 2.3E-38 260.0 26.6 266 17-339 34-367 (437)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 4.1E-34 1.4E-38 258.4 24.9 277 12-304 36-345 (402)
104 3mmy_A MRNA export factor; mRN 100.0 2.5E-33 8.6E-38 250.1 28.4 280 85-394 24-345 (368)
105 1p22_A F-BOX/WD-repeat protein 100.0 3.5E-32 1.2E-36 248.2 35.1 276 50-396 132-415 (435)
106 2w18_A PALB2, fancn, partner a 100.0 1.3E-32 4.3E-37 232.7 28.8 272 12-393 41-355 (356)
107 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-32 1.3E-36 240.5 33.4 277 47-397 7-339 (351)
108 1yfq_A Cell cycle arrest prote 100.0 3.1E-32 1.1E-36 240.7 32.4 262 47-328 7-321 (342)
109 3dm0_A Maltose-binding peripla 100.0 2.5E-32 8.4E-37 263.7 34.4 258 133-421 376-681 (694)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-32 5.8E-37 251.4 30.6 277 9-300 3-390 (450)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-31 7.2E-36 244.1 37.1 273 52-396 5-392 (450)
112 3bws_A Protein LP49; two-domai 100.0 2.5E-31 8.7E-36 242.6 36.7 348 7-394 24-431 (433)
113 3jro_A Fusion protein of prote 100.0 1.1E-33 3.6E-38 274.7 21.0 253 4-304 3-288 (753)
114 3jrp_A Fusion protein of prote 100.0 2E-32 7E-37 245.2 27.8 243 131-395 3-287 (379)
115 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-31 9.4E-36 237.4 33.4 261 47-395 4-274 (372)
116 3bws_A Protein LP49; two-domai 100.0 2.3E-31 8E-36 242.9 32.9 306 9-331 59-432 (433)
117 2aq5_A Coronin-1A; WD40 repeat 100.0 7.7E-32 2.6E-36 243.5 29.2 265 102-395 37-342 (402)
118 2xyi_A Probable histone-bindin 100.0 1.3E-31 4.4E-36 243.9 27.0 260 5-302 123-411 (430)
119 4gq1_A NUP37; propeller, trans 100.0 2.2E-31 7.4E-36 239.3 27.9 222 147-394 95-388 (393)
120 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-31 8.1E-36 234.9 27.5 259 59-394 44-332 (343)
121 2xyi_A Probable histone-bindin 100.0 2E-30 6.7E-35 236.1 34.1 235 94-333 123-412 (430)
122 3vu4_A KMHSV2; beta-propeller 100.0 7.7E-31 2.6E-35 232.3 29.8 249 84-395 3-271 (355)
123 1nir_A Nitrite reductase; hemo 100.0 5.7E-30 1.9E-34 238.1 34.7 312 17-339 144-522 (543)
124 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-31 6.4E-36 235.6 23.5 259 17-298 43-330 (343)
125 1k32_A Tricorn protease; prote 100.0 1.2E-29 4E-34 255.4 37.3 373 5-421 47-490 (1045)
126 4gq1_A NUP37; propeller, trans 100.0 4E-30 1.4E-34 231.0 29.3 274 12-300 17-388 (393)
127 3jro_A Fusion protein of prote 100.0 6.4E-30 2.2E-34 248.2 28.6 238 47-334 5-288 (753)
128 1nir_A Nitrite reductase; hemo 100.0 4.4E-28 1.5E-32 225.4 33.6 328 59-417 145-534 (543)
129 1k32_A Tricorn protease; prote 100.0 3E-28 1E-32 245.2 33.3 397 5-421 94-626 (1045)
130 2w18_A PALB2, fancn, partner a 100.0 2.6E-28 8.8E-33 206.5 25.0 247 4-299 80-355 (356)
131 2ecf_A Dipeptidyl peptidase IV 100.0 1.9E-27 6.5E-32 231.8 29.1 307 10-332 36-460 (741)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.2E-26 1.4E-30 206.0 29.6 285 9-309 61-394 (415)
133 2hqs_A Protein TOLB; TOLB, PAL 100.0 1E-25 3.5E-30 203.5 27.8 289 52-377 63-410 (415)
134 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-25 4.5E-30 217.6 29.4 303 13-333 28-437 (706)
135 2ecf_A Dipeptidyl peptidase IV 99.9 4.2E-25 1.4E-29 215.2 31.8 292 99-420 36-442 (741)
136 3u4y_A Uncharacterized protein 99.9 1.4E-24 4.9E-29 190.6 30.4 275 16-303 3-306 (331)
137 1xfd_A DIP, dipeptidyl aminope 99.9 8.5E-25 2.9E-29 212.5 28.2 302 11-319 17-428 (723)
138 3vgz_A Uncharacterized protein 99.9 5.6E-24 1.9E-28 188.5 30.6 268 9-291 39-335 (353)
139 1pby_B Quinohemoprotein amine 99.9 2.7E-24 9.3E-29 189.2 26.8 251 78-338 9-317 (337)
140 3u4y_A Uncharacterized protein 99.9 1.6E-23 5.4E-28 183.9 31.4 256 117-394 19-303 (331)
141 3vgz_A Uncharacterized protein 99.9 4E-23 1.4E-27 183.0 33.6 272 51-386 40-335 (353)
142 2z3z_A Dipeptidyl aminopeptida 99.9 5.1E-24 1.7E-28 206.4 29.0 275 11-303 82-437 (706)
143 1ri6_A Putative isomerase YBHE 99.9 2.6E-23 8.8E-28 183.4 28.8 266 25-303 8-312 (343)
144 1xfd_A DIP, dipeptidyl aminope 99.9 2.6E-24 8.7E-29 209.2 24.1 298 53-384 18-429 (723)
145 1ri6_A Putative isomerase YBHE 99.9 9E-23 3.1E-27 179.9 29.9 254 117-396 14-309 (343)
146 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.7E-28 181.0 23.6 252 28-292 18-294 (297)
147 1pby_B Quinohemoprotein amine 99.9 6.1E-23 2.1E-27 180.5 26.5 264 23-309 2-318 (337)
148 2ojh_A Uncharacterized protein 99.9 8.9E-23 3.1E-27 175.9 26.4 238 78-322 20-293 (297)
149 3o4h_A Acylamino-acid-releasin 99.9 9.4E-23 3.2E-27 192.9 25.6 268 9-301 20-315 (582)
150 1z68_A Fibroblast activation p 99.9 1.8E-23 6.3E-28 202.9 20.5 314 15-335 20-447 (719)
151 3hfq_A Uncharacterized protein 99.9 2.6E-21 8.9E-26 170.9 30.3 262 117-401 15-324 (347)
152 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-21 5E-26 172.6 25.4 264 57-337 5-331 (349)
153 3hfq_A Uncharacterized protein 99.9 8.2E-21 2.8E-25 167.7 30.2 266 31-304 16-322 (347)
154 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-21 5.1E-26 172.5 23.9 274 15-309 4-333 (349)
155 3pe7_A Oligogalacturonate lyas 99.9 2.8E-21 9.6E-26 173.5 25.6 277 5-298 25-379 (388)
156 4a5s_A Dipeptidyl peptidase 4 99.9 1.3E-20 4.5E-25 182.9 30.6 355 10-394 16-448 (740)
157 1z68_A Fibroblast activation p 99.9 2.6E-21 8.9E-26 187.8 24.9 305 55-399 19-446 (719)
158 3scy_A Hypothetical bacterial 99.9 7.8E-20 2.7E-24 162.3 30.5 258 117-401 26-344 (361)
159 3o4h_A Acylamino-acid-releasin 99.9 2.5E-21 8.5E-26 183.2 21.8 258 50-331 20-315 (582)
160 3scy_A Hypothetical bacterial 99.9 1.7E-19 5.8E-24 160.2 31.1 265 32-304 28-342 (361)
161 3pe7_A Oligogalacturonate lyas 99.9 5.9E-20 2E-24 164.8 26.5 318 35-394 14-381 (388)
162 4a5s_A Dipeptidyl peptidase 4 99.9 1.9E-19 6.5E-24 174.8 29.6 289 100-419 17-432 (740)
163 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-19 6.4E-24 163.0 27.2 198 96-299 89-331 (434)
164 3c5m_A Oligogalacturonate lyas 99.8 1.3E-19 4.4E-24 163.1 21.7 313 35-395 14-382 (396)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 1E-18 3.5E-23 155.2 26.4 260 32-302 15-342 (365)
166 2oiz_A Aromatic amine dehydrog 99.8 8.3E-19 2.8E-23 155.0 25.4 263 117-415 30-360 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.1E-19 2.8E-23 155.8 25.3 254 118-396 14-342 (365)
168 3c5m_A Oligogalacturonate lyas 99.8 2.7E-19 9.3E-24 160.9 22.2 274 12-303 37-386 (396)
169 2oiz_A Aromatic amine dehydrog 99.8 1.1E-17 3.9E-22 147.7 28.7 276 20-310 13-345 (361)
170 1qks_A Cytochrome CD1 nitrite 99.8 6.7E-17 2.3E-21 149.9 34.6 309 20-339 165-546 (567)
171 2oit_A Nucleoporin 214KDA; NH2 99.8 1.4E-17 4.8E-22 150.7 28.1 212 80-302 23-279 (434)
172 3azo_A Aminopeptidase; POP fam 99.8 1.5E-17 5E-22 159.9 26.4 288 5-306 18-374 (662)
173 1q7f_A NHL, brain tumor CG1071 99.8 4.3E-16 1.5E-20 133.4 31.4 240 7-302 26-281 (286)
174 1qks_A Cytochrome CD1 nitrite 99.8 3.7E-15 1.3E-19 138.2 36.4 286 11-309 197-546 (567)
175 3azo_A Aminopeptidase; POP fam 99.8 2.4E-16 8.2E-21 151.5 29.1 227 98-330 22-322 (662)
176 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-15 4.7E-20 132.9 29.1 258 10-301 23-322 (329)
177 3dsm_A Uncharacterized protein 99.8 2.1E-15 7.1E-20 131.6 29.6 256 31-308 16-308 (328)
178 2gop_A Trilobed protease; beta 99.7 1.1E-15 3.7E-20 134.8 25.2 258 10-300 14-330 (347)
179 3fvz_A Peptidyl-glycine alpha- 99.7 6.3E-16 2.2E-20 135.0 22.7 228 142-395 24-322 (329)
180 2dg1_A DRP35, lactonase; beta 99.7 4.2E-15 1.5E-19 130.2 26.4 263 11-291 6-301 (333)
181 2gop_A Trilobed protease; beta 99.7 7.6E-15 2.6E-19 129.3 26.7 253 52-330 15-330 (347)
182 1q7f_A NHL, brain tumor CG1071 99.7 1.5E-14 5.1E-19 123.8 27.7 221 143-395 31-280 (286)
183 3e5z_A Putative gluconolactona 99.7 2.2E-14 7.5E-19 123.4 27.8 203 6-225 23-253 (296)
184 2xdw_A Prolyl endopeptidase; a 99.7 1.7E-14 5.8E-19 139.5 28.9 276 20-303 81-416 (710)
185 2dg1_A DRP35, lactonase; beta 99.7 1.6E-13 5.5E-18 120.1 32.2 245 6-258 40-317 (333)
186 2z2n_A Virginiamycin B lyase; 99.7 3E-13 1E-17 116.3 33.2 275 6-303 10-297 (299)
187 3e5z_A Putative gluconolactona 99.7 7.6E-14 2.6E-18 120.0 29.3 217 143-396 29-285 (296)
188 2mad_H Methylamine dehydrogena 99.7 1.1E-13 3.8E-18 122.2 30.5 248 119-401 48-355 (373)
189 3dsm_A Uncharacterized protein 99.7 1.3E-14 4.5E-19 126.5 24.2 247 78-338 15-308 (328)
190 3sjl_D Methylamine dehydrogena 99.7 2.4E-13 8.2E-18 118.4 30.2 281 16-310 38-372 (386)
191 2bkl_A Prolyl endopeptidase; m 99.7 1.2E-14 4.1E-19 140.1 24.3 255 8-304 118-400 (695)
192 2xdw_A Prolyl endopeptidase; a 99.7 4.9E-14 1.7E-18 136.3 28.2 248 8-259 122-416 (710)
193 2mad_H Methylamine dehydrogena 99.7 6E-13 2.1E-17 117.5 31.7 276 17-308 27-357 (373)
194 3no2_A Uncharacterized protein 99.7 1.9E-13 6.5E-18 115.6 26.6 190 21-225 4-203 (276)
195 3no2_A Uncharacterized protein 99.6 1.1E-13 3.9E-18 116.9 22.3 225 152-402 4-258 (276)
196 1rwi_B Serine/threonine-protei 99.6 3.7E-13 1.3E-17 114.0 25.4 235 12-303 25-266 (270)
197 3sjl_D Methylamine dehydrogena 99.6 6.5E-13 2.2E-17 115.7 26.8 250 118-401 59-368 (386)
198 1yr2_A Prolyl oligopeptidase; 99.6 1.7E-13 5.9E-18 133.0 25.4 277 19-304 115-444 (741)
199 2z2n_A Virginiamycin B lyase; 99.6 9.8E-12 3.3E-16 106.8 33.8 231 51-300 14-254 (299)
200 3c75_H MADH, methylamine dehyd 99.6 4.2E-13 1.4E-17 119.1 25.2 276 20-309 82-410 (426)
201 3c75_H MADH, methylamine dehyd 99.6 4.2E-13 1.4E-17 119.1 25.0 252 118-402 99-408 (426)
202 2bkl_A Prolyl endopeptidase; m 99.6 8.5E-14 2.9E-18 134.2 22.3 247 148-418 74-378 (695)
203 2qc5_A Streptogramin B lactona 99.6 1.2E-11 4E-16 106.3 32.5 270 8-300 17-299 (300)
204 1rwi_B Serine/threonine-protei 99.6 2.6E-12 9E-17 108.7 24.6 223 101-334 25-267 (270)
205 3q7m_A Lipoprotein YFGL, BAMB; 99.5 3.6E-11 1.2E-15 107.0 32.0 283 62-392 52-375 (376)
206 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.8E-11 6E-16 109.0 29.2 289 22-328 53-375 (376)
207 2qc5_A Streptogramin B lactona 99.5 7.8E-11 2.7E-15 101.2 32.2 260 99-393 19-298 (300)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 8.8E-12 3E-16 108.0 26.4 235 10-259 17-301 (314)
209 1yr2_A Prolyl oligopeptidase; 99.5 1.8E-12 6.2E-17 125.8 23.0 243 8-259 160-443 (741)
210 1mda_H Methylamine dehydrogena 99.5 2.1E-12 7.1E-17 112.8 20.7 242 119-401 47-351 (368)
211 3iuj_A Prolyl endopeptidase; h 99.5 5.2E-12 1.8E-16 121.5 24.9 258 8-304 126-408 (693)
212 1kb0_A Quinohemoprotein alcoho 99.5 3.9E-11 1.3E-15 114.4 30.0 262 63-337 77-513 (677)
213 3g4e_A Regucalcin; six bladed 99.5 6.9E-11 2.4E-15 101.4 28.0 221 9-245 11-261 (297)
214 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.8E-11 9.7E-16 104.7 25.7 232 53-301 19-299 (314)
215 1yiq_A Quinohemoprotein alcoho 99.5 3.5E-11 1.2E-15 115.0 27.6 262 63-337 70-511 (689)
216 3g4e_A Regucalcin; six bladed 99.5 2E-10 6.7E-15 98.5 29.6 225 54-290 15-262 (297)
217 1mda_H Methylamine dehydrogena 99.5 7.1E-12 2.4E-16 109.4 19.8 257 32-309 47-354 (368)
218 3hrp_A Uncharacterized protein 99.5 7.8E-11 2.7E-15 105.5 27.0 231 11-255 131-408 (409)
219 1xip_A Nucleoporin NUP159; bet 99.4 4.5E-12 1.5E-16 110.9 17.2 170 12-202 39-230 (388)
220 3hrp_A Uncharacterized protein 99.4 2E-10 6.8E-15 102.9 27.1 192 101-304 132-357 (409)
221 1kb0_A Quinohemoprotein alcoho 99.4 1.2E-10 4.2E-15 111.0 26.2 272 24-309 79-515 (677)
222 1yiq_A Quinohemoprotein alcoho 99.4 1.3E-10 4.6E-15 111.0 25.9 274 22-309 70-513 (689)
223 2ece_A 462AA long hypothetical 99.4 5.8E-09 2E-13 91.6 32.8 217 80-300 43-351 (462)
224 2ece_A 462AA long hypothetical 99.4 1.1E-09 3.8E-14 96.1 27.6 219 61-288 93-399 (462)
225 2ghs_A AGR_C_1268P; regucalcin 99.4 2.2E-09 7.6E-14 93.2 29.2 219 12-247 50-293 (326)
226 3dr2_A Exported gluconolactona 99.4 5.8E-10 2E-14 96.0 24.9 209 144-387 47-299 (305)
227 3hxj_A Pyrrolo-quinoline quino 99.3 1.2E-10 4.2E-15 101.5 19.9 269 79-394 39-323 (330)
228 2ghs_A AGR_C_1268P; regucalcin 99.3 3.9E-09 1.3E-13 91.7 28.9 220 55-291 52-293 (326)
229 2qe8_A Uncharacterized protein 99.3 4.8E-10 1.7E-14 98.2 23.2 261 10-292 16-313 (343)
230 2hz6_A Endoplasmic reticulum t 99.3 2.6E-13 9E-18 120.0 2.0 247 62-331 8-279 (369)
231 3iuj_A Prolyl endopeptidase; h 99.3 2.4E-10 8.3E-15 109.9 22.5 225 142-394 129-404 (693)
232 3dr2_A Exported gluconolactona 99.3 3.9E-09 1.3E-13 90.8 27.1 226 51-298 44-303 (305)
233 1xip_A Nucleoporin NUP159; bet 99.3 6.5E-11 2.2E-15 103.6 15.9 171 101-287 39-231 (388)
234 4a2l_A BT_4663, two-component 99.3 3.1E-07 1.1E-11 89.9 43.7 338 13-394 175-570 (795)
235 4a2l_A BT_4663, two-component 99.3 2.1E-07 7.3E-12 91.1 41.4 273 10-304 214-529 (795)
236 3hxj_A Pyrrolo-quinoline quino 99.2 4.3E-10 1.5E-14 98.0 16.9 285 15-331 24-324 (330)
237 1npe_A Nidogen, entactin; glyc 99.2 2.4E-08 8.1E-13 84.1 27.0 246 22-282 1-263 (267)
238 2qe8_A Uncharacterized protein 99.2 1.5E-09 5.1E-14 95.1 20.0 259 143-421 18-309 (343)
239 1kv9_A Type II quinohemoprotei 99.2 1.4E-08 4.7E-13 96.9 27.8 262 63-337 66-494 (668)
240 2hz6_A Endoplasmic reticulum t 99.2 9.9E-12 3.4E-16 109.9 5.5 173 152-336 8-197 (369)
241 3v9f_A Two-component system se 99.1 1.5E-06 5.2E-11 84.9 39.6 271 11-303 211-526 (781)
242 1flg_A Protein (quinoprotein e 99.1 2.7E-07 9.1E-12 86.3 32.5 263 63-337 68-522 (582)
243 1w6s_A Methanol dehydrogenase 99.1 2.2E-07 7.4E-12 86.8 31.0 261 63-337 62-509 (599)
244 2ad6_A Methanol dehydrogenase 99.1 8.1E-08 2.8E-12 89.7 28.1 262 63-337 62-500 (571)
245 1kv9_A Type II quinohemoprotei 99.1 1.5E-08 5.2E-13 96.6 22.8 272 23-309 67-496 (668)
246 3v9f_A Two-component system se 99.1 2.8E-06 9.5E-11 83.1 39.3 342 11-394 163-567 (781)
247 2iwa_A Glutamine cyclotransfer 99.1 7.4E-08 2.5E-12 79.5 23.8 191 54-258 23-238 (266)
248 2ad6_A Methanol dehydrogenase 99.1 1.8E-08 6.1E-13 94.1 22.5 272 24-310 64-503 (571)
249 1fwx_A Nitrous oxide reductase 99.1 1.8E-08 6E-13 91.8 21.5 249 52-333 85-433 (595)
250 1fwx_A Nitrous oxide reductase 99.1 2.8E-08 9.7E-13 90.5 21.6 235 20-259 99-433 (595)
251 1npe_A Nidogen, entactin; glyc 99.0 9.9E-07 3.4E-11 74.1 28.7 218 80-309 10-246 (267)
252 2xzh_A Clathrin heavy chain 1; 99.0 5.5E-06 1.9E-10 69.0 29.9 213 33-260 51-293 (365)
253 1w6s_A Methanol dehydrogenase 99.0 1.6E-07 5.3E-12 87.7 23.6 270 24-309 64-511 (599)
254 1flg_A Protein (quinoprotein e 99.0 4.4E-07 1.5E-11 84.8 26.6 273 21-310 68-525 (582)
255 1bpo_A Protein (clathrin); cla 98.9 1.6E-05 5.6E-10 68.9 32.2 213 33-260 50-292 (494)
256 2iwa_A Glutamine cyclotransfer 98.9 9.7E-07 3.3E-11 72.8 23.9 197 8-218 16-238 (266)
257 3nol_A Glutamine cyclotransfer 98.9 6.7E-07 2.3E-11 72.8 21.8 177 54-246 45-245 (262)
258 3nok_A Glutaminyl cyclase; bet 98.9 4.5E-07 1.5E-11 73.8 20.6 172 55-245 58-254 (268)
259 2fp8_A Strictosidine synthase; 98.9 4E-06 1.4E-10 72.5 26.4 229 12-257 20-313 (322)
260 3mbr_X Glutamine cyclotransfer 98.8 3.6E-06 1.2E-10 68.0 23.6 177 54-246 23-224 (243)
261 3nol_A Glutamine cyclotransfer 98.8 5.8E-07 2E-11 73.2 18.7 187 8-207 38-246 (262)
262 1ijq_A LDL receptor, low-densi 98.8 2.8E-05 9.5E-10 66.9 28.9 222 79-308 9-245 (316)
263 3v64_C Agrin; beta propeller, 98.8 7.7E-05 2.6E-09 65.0 32.4 234 10-259 33-277 (349)
264 3v65_B Low-density lipoprotein 98.8 4.9E-05 1.7E-09 67.3 30.5 231 13-259 79-320 (386)
265 3v64_C Agrin; beta propeller, 98.8 3.5E-05 1.2E-09 67.2 29.1 223 79-309 52-283 (349)
266 3nok_A Glutaminyl cyclase; bet 98.7 2.2E-06 7.7E-11 69.8 19.6 179 13-205 57-254 (268)
267 3v65_B Low-density lipoprotein 98.7 3E-05 1E-09 68.7 28.4 222 79-308 95-325 (386)
268 2p4o_A Hypothetical protein; p 98.7 2E-05 6.8E-10 67.5 26.4 223 53-291 33-279 (306)
269 3mbr_X Glutamine cyclotransfer 98.7 8.6E-06 2.9E-10 65.8 21.1 186 8-206 16-224 (243)
270 2xe4_A Oligopeptidase B; hydro 98.7 1.8E-05 6.1E-10 76.7 27.4 244 8-259 170-460 (751)
271 3p5b_L Low density lipoprotein 98.6 0.00013 4.6E-09 64.8 30.0 225 79-309 91-328 (400)
272 2fp8_A Strictosidine synthase; 98.6 3.4E-05 1.2E-09 66.6 25.6 199 101-309 20-276 (322)
273 2p4o_A Hypothetical protein; p 98.6 8.1E-05 2.8E-09 63.7 27.1 221 11-244 32-276 (306)
274 3sov_A LRP-6, low-density lipo 98.6 0.00015 5.1E-09 62.2 28.1 223 79-308 12-245 (318)
275 1k3i_A Galactose oxidase precu 98.5 1.7E-05 6E-10 75.7 22.9 255 102-384 188-530 (656)
276 3ei3_A DNA damage-binding prot 98.5 0.0012 4.3E-08 66.5 40.5 351 31-424 492-946 (1158)
277 3sov_A LRP-6, low-density lipo 98.5 0.00029 1E-08 60.4 27.5 219 112-335 6-242 (318)
278 2xe4_A Oligopeptidase B; hydro 98.5 5.3E-05 1.8E-09 73.5 24.2 196 53-255 175-398 (751)
279 3tc9_A Hypothetical hydrolase; 98.5 0.00015 5.1E-09 65.1 25.5 150 54-216 139-300 (430)
280 1k3i_A Galactose oxidase precu 98.5 2.4E-05 8.2E-10 74.7 21.2 263 15-289 190-530 (656)
281 1ijq_A LDL receptor, low-densi 98.5 0.00054 1.9E-08 58.8 31.9 221 24-259 3-240 (316)
282 3p5b_L Low density lipoprotein 98.4 0.00073 2.5E-08 60.1 32.4 224 23-260 84-323 (400)
283 3tc9_A Hypothetical hydrolase; 98.4 0.00012 4E-09 65.9 24.0 237 12-256 138-429 (430)
284 4hw6_A Hypothetical protein, I 98.4 0.00028 9.4E-09 63.4 25.9 152 145-300 142-303 (433)
285 3qqz_A Putative uncharacterize 98.4 0.00033 1.1E-08 57.4 23.6 195 99-300 26-252 (255)
286 3m0c_C LDL receptor, low-densi 98.4 0.00054 1.8E-08 66.2 28.6 222 79-308 403-639 (791)
287 4hw6_A Hypothetical protein, I 98.4 0.00045 1.5E-08 62.1 26.6 236 12-255 140-431 (433)
288 3m0c_C LDL receptor, low-densi 98.3 0.0017 5.8E-08 62.7 30.4 225 24-260 397-635 (791)
289 2xzh_A Clathrin heavy chain 1; 98.3 0.0011 3.8E-08 55.4 28.1 194 16-225 72-298 (365)
290 3amr_A 3-phytase; beta-propell 98.3 0.00079 2.7E-08 57.4 23.9 133 78-216 48-209 (355)
291 3s94_A LRP-6, low-density lipo 98.3 0.0031 1.1E-07 59.4 44.1 348 10-394 39-466 (619)
292 3qqz_A Putative uncharacterize 98.3 0.0012 4E-08 54.1 27.4 194 51-255 26-251 (255)
293 3ei3_A DNA damage-binding prot 98.3 0.0056 1.9E-07 61.9 41.2 347 10-395 553-999 (1158)
294 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0039 1.3E-07 58.8 30.3 218 79-306 14-242 (628)
295 3kya_A Putative phosphatase; s 98.2 0.0024 8.1E-08 57.7 26.9 152 54-215 141-339 (496)
296 1xi4_A Clathrin heavy chain; a 98.2 0.00024 8.3E-09 71.1 21.2 213 33-260 50-292 (1630)
297 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0048 1.6E-07 58.2 50.0 196 11-220 37-240 (628)
298 1bpo_A Protein (clathrin); cla 98.2 0.0029 9.8E-08 55.3 27.6 195 15-225 70-297 (494)
299 3kya_A Putative phosphatase; s 98.2 0.0017 5.7E-08 58.7 24.6 244 12-258 140-476 (496)
300 1n7d_A LDL receptor, low-densi 98.1 1.4E-05 4.8E-10 76.5 11.7 223 79-308 385-621 (699)
301 3amr_A 3-phytase; beta-propell 98.1 0.0011 3.9E-08 56.5 20.2 182 196-400 39-268 (355)
302 1n7d_A LDL receptor, low-densi 98.0 0.00017 5.8E-09 69.1 16.5 214 117-337 385-620 (699)
303 3ott_A Two-component system se 97.9 0.021 7.2E-07 55.5 34.5 272 12-305 192-506 (758)
304 2xbg_A YCF48-like protein; pho 97.9 0.011 3.7E-07 50.9 32.0 266 10-299 35-320 (327)
305 2p9w_A MAL S 1 allergenic prot 97.8 0.012 4E-07 49.8 21.1 194 101-301 14-265 (334)
306 3sre_A PON1, serum paraoxonase 97.7 0.0071 2.4E-07 52.2 19.7 179 117-300 82-297 (355)
307 3s25_A Hypothetical 7-bladed b 97.7 0.017 5.7E-07 48.9 22.6 138 151-304 23-179 (302)
308 3s94_A LRP-6, low-density lipo 97.6 0.054 1.8E-06 51.0 43.6 276 11-302 84-424 (619)
309 2p9w_A MAL S 1 allergenic prot 97.6 0.009 3.1E-07 50.5 17.8 154 146-302 17-216 (334)
310 3ii7_A Kelch-like protein 7; p 97.4 0.046 1.6E-06 46.4 20.7 184 63-259 11-227 (306)
311 2ism_A Putative oxidoreductase 97.4 0.06 2.1E-06 46.7 21.5 137 54-202 33-219 (352)
312 2xbg_A YCF48-like protein; pho 97.3 0.06 2E-06 46.2 28.1 229 52-300 36-277 (327)
313 2vpj_A Kelch-like protein 12; 97.3 0.04 1.4E-06 46.6 19.0 227 21-258 14-279 (301)
314 1xi4_A Clathrin heavy chain; a 97.2 0.026 8.8E-07 57.1 18.7 197 16-225 71-297 (1630)
315 2vpj_A Kelch-like protein 12; 97.2 0.056 1.9E-06 45.7 19.0 174 79-259 30-233 (301)
316 3s25_A Hypothetical 7-bladed b 97.2 0.085 2.9E-06 44.5 24.1 211 59-301 21-255 (302)
317 3pbp_A Nucleoporin NUP82; beta 97.2 0.09 3.1E-06 46.0 19.5 149 112-298 35-209 (452)
318 3pbp_A Nucleoporin NUP82; beta 97.2 0.096 3.3E-06 45.9 19.6 142 18-169 28-208 (452)
319 3ott_A Two-component system se 97.1 0.21 7.3E-06 48.5 40.9 262 10-301 62-352 (758)
320 2be1_A Serine/threonine-protei 97.0 0.0053 1.8E-07 52.5 10.4 112 198-311 11-140 (339)
321 2xn4_A Kelch-like protein 2; s 97.0 0.097 3.3E-06 44.2 18.6 229 21-259 15-278 (302)
322 1zgk_A Kelch-like ECH-associat 96.9 0.11 3.9E-06 43.9 18.5 230 19-258 22-288 (308)
323 3sre_A PON1, serum paraoxonase 96.9 0.15 5.1E-06 44.0 18.9 142 188-331 52-252 (355)
324 3ii7_A Kelch-like protein 7; p 96.9 0.15 5.3E-06 43.0 20.9 224 22-259 12-274 (306)
325 2ism_A Putative oxidoreductase 96.9 0.18 6.2E-06 43.7 25.6 103 11-116 31-151 (352)
326 2xn4_A Kelch-like protein 2; s 96.8 0.13 4.3E-06 43.5 17.9 132 196-332 108-277 (302)
327 4asc_A Kelch repeat and BTB do 96.8 0.12 4.2E-06 43.9 17.7 177 117-303 12-223 (315)
328 2be1_A Serine/threonine-protei 96.8 0.038 1.3E-06 47.3 13.9 174 155-335 12-235 (339)
329 3a9g_A Putative uncharacterize 96.8 0.23 8E-06 43.0 23.2 227 99-329 28-330 (354)
330 1zgk_A Kelch-like ECH-associat 96.7 0.22 7.6E-06 42.1 18.6 184 63-259 24-242 (308)
331 4asc_A Kelch repeat and BTB do 96.6 0.29 9.8E-06 41.6 19.5 171 80-259 13-223 (315)
332 3a9g_A Putative uncharacterize 96.6 0.33 1.1E-05 42.1 28.0 101 11-116 29-151 (354)
333 2g8s_A Glucose/sorbosone dehyd 96.5 0.36 1.2E-05 41.8 23.7 139 144-286 20-214 (353)
334 2uvk_A YJHT; unknown function, 96.1 0.46 1.6E-05 41.1 17.5 41 294-334 287-345 (357)
335 3das_A Putative oxidoreductase 95.6 0.93 3.2E-05 38.9 23.6 101 11-116 32-156 (347)
336 1cru_A Protein (soluble quinop 95.4 1.5 5.1E-05 39.4 30.3 106 11-116 27-160 (454)
337 2uvk_A YJHT; unknown function, 95.1 1.4 4.8E-05 38.0 20.2 73 21-94 19-100 (357)
338 1tl2_A L10, protein (tachylect 95.1 0.93 3.2E-05 35.8 14.7 99 143-252 42-158 (236)
339 2g8s_A Glucose/sorbosone dehyd 95.1 1.5 5E-05 37.9 27.5 106 11-116 18-146 (353)
340 2woz_A Kelch repeat and BTB do 95.0 1.4 4.8E-05 37.3 20.7 170 80-259 24-233 (318)
341 3das_A Putative oxidoreductase 95.0 1.5 5.1E-05 37.6 26.0 225 53-288 33-326 (347)
342 1tl2_A L10, protein (tachylect 95.0 1.1 3.6E-05 35.5 17.7 105 186-299 41-161 (236)
343 3sbq_A Nitrous-oxide reductase 94.5 2.9 9.8E-05 38.2 21.2 194 20-218 140-409 (638)
344 2woz_A Kelch repeat and BTB do 93.8 2.7 9.1E-05 35.5 19.0 187 24-219 18-233 (318)
345 1cru_A Protein (soluble quinop 93.7 3.7 0.00013 36.9 28.6 105 99-204 26-162 (454)
346 2zwa_A Leucine carboxyl methyl 93.1 6.2 0.00021 37.7 17.6 105 152-259 451-579 (695)
347 2zwa_A Leucine carboxyl methyl 92.7 6.3 0.00022 37.7 17.1 197 20-220 396-638 (695)
348 3sbq_A Nitrous-oxide reductase 91.4 8.4 0.00029 35.3 22.6 91 210-301 300-408 (638)
349 4hvt_A Ritya.17583.B, post-pro 87.7 20 0.00069 34.3 25.0 236 14-256 132-429 (711)
350 4gq2_M Nucleoporin NUP120; bet 87.3 25 0.00086 35.0 18.6 38 270-308 236-273 (950)
351 4fhn_B Nucleoporin NUP120; pro 74.4 67 0.0023 32.8 14.6 36 366-402 239-274 (1139)
352 4gq2_M Nucleoporin NUP120; bet 73.1 17 0.00059 36.2 9.7 38 187-225 237-274 (950)
353 4fhn_B Nucleoporin NUP120; pro 71.3 14 0.00047 37.8 8.8 37 271-308 239-275 (1139)
354 3q6k_A 43.2 kDa salivary prote 66.7 64 0.0022 28.0 21.8 162 53-217 88-306 (381)
355 3kci_A Probable E3 ubiquitin-p 61.7 80 0.0027 27.3 21.9 198 187-399 106-349 (389)
356 2wg3_C Hedgehog-interacting pr 59.9 97 0.0033 27.7 27.5 101 54-161 16-158 (463)
357 2wg3_C Hedgehog-interacting pr 58.7 1E+02 0.0035 27.6 27.0 100 144-245 16-158 (463)
358 3q6k_A 43.2 kDa salivary prote 58.4 92 0.0031 27.0 23.9 157 11-173 87-306 (381)
359 3f7f_A Nucleoporin NUP120; nuc 55.0 21 0.00073 33.8 6.1 60 270-332 222-306 (729)
360 4a9v_A PHOX; hydrolase, beta-p 47.8 49 0.0017 30.5 7.0 59 230-289 480-550 (592)
361 3f7f_A Nucleoporin NUP120; nuc 46.3 37 0.0013 32.3 6.2 37 187-226 223-259 (729)
362 3l6v_A GYRA, DNA gyrase subuni 44.2 1.6E+02 0.0053 25.5 21.3 136 193-331 3-180 (370)
363 1suu_A DNA gyrase subunit A; t 42.8 1.5E+02 0.005 24.8 21.7 182 195-395 6-231 (312)
364 3zwu_A Alkaline phosphatase PH 41.3 66 0.0022 29.9 7.0 58 229-287 479-548 (592)
365 4hvt_A Ritya.17583.B, post-pro 39.0 2.7E+02 0.0091 26.7 21.9 235 55-300 132-429 (711)
366 3uc1_A DNA gyrase subunit A; D 36.6 1.9E+02 0.0066 24.3 17.7 198 2-207 87-321 (327)
367 3kci_A Probable E3 ubiquitin-p 35.8 2.1E+02 0.0073 24.6 18.2 141 244-395 68-241 (389)
368 1q47_A Semaphorin 3A; beta pro 35.5 1.3E+02 0.0045 27.2 7.9 57 239-296 422-487 (495)
369 3qhy_B Beta-lactamase inhibito 30.7 2.2E+02 0.0075 23.2 20.8 208 101-327 25-242 (282)
370 3no0_A DNA gyrase subunit A; D 30.1 2.2E+02 0.0077 23.1 18.1 193 11-216 24-245 (276)
371 4a9v_A PHOX; hydrolase, beta-p 29.9 2.8E+02 0.0095 25.7 8.9 57 101-158 477-547 (592)
372 3zwu_A Alkaline phosphatase PH 28.3 2.8E+02 0.0096 25.8 8.9 56 102-158 478-547 (592)
373 1zi0_A DNA gyrase subunit A; b 25.8 2.9E+02 0.0097 22.9 25.6 250 152-420 2-303 (307)
374 4d9s_A UVB-resistance protein 22.6 3.8E+02 0.013 23.2 28.9 193 187-399 122-361 (406)
375 1q47_A Semaphorin 3A; beta pro 21.3 3.9E+02 0.013 24.1 8.3 27 364-390 461-487 (495)
376 3al9_A Plexin-A2; beta-propell 20.2 1.2E+02 0.0041 27.8 4.8 77 12-93 19-118 (539)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.9e-53 Score=399.92 Aligned_cols=402 Identities=13% Similarity=0.114 Sum_probs=309.3
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc--cccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCe
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE--KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR 81 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~ 81 (424)
.+.+|.+.|++++|+|+|++||+|+.++ |+|||+.+++. ......|.+.|..++|+|+++.+++++.+.. .++.
T Consensus 54 ~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~---~~~~ 130 (611)
T 1nr0_A 54 IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE---RFGH 130 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS---CSEE
T ss_pred EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC---ceeE
Confidence 4789999999999999999999999998 99999876544 2334567899999999999999998885410 1247
Q ss_pred EEEEECCCCcEEEEEe-ecCCeEEEEecCCce-EEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeE
Q psy3710 82 VMIWDDLKKQVVICLE-FNAPVKGVRLRRDKI-VVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 82 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (424)
|++|| +++....+. |...|.+++|+|++. .+++ |+.|++||.. ..+....+..|.. .+.+++|+|++++|
T Consensus 131 v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~-~~~~~~~l~~H~~--~V~~v~fspdg~~l 205 (611)
T 1nr0_A 131 VFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP-PFKFKSTFGEHTK--FVHSVRYNPDGSLF 205 (611)
T ss_dssp EEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETT-TBEEEEEECCCSS--CEEEEEECTTSSEE
T ss_pred EEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECC-CCeEeeeeccccC--ceEEEEECCCCCEE
Confidence 77777 455566666 889999999999974 3443 8999999986 6777788887774 48899999999999
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccc-------cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc--
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIA-------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG-- 227 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~-- 227 (424)
++ |+.|+.|++||+.++ +....+. +|.+.|.+++|+|+|++|++++.|++ |++||+++++.+..+..+
T Consensus 206 as-~s~D~~i~lwd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 206 AS-TGGDGTIVLYNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp EE-EETTSCEEEEETTTC-CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCSS
T ss_pred EE-EECCCcEEEEECCCC-cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCCC
Confidence 98 999999999999876 4444442 79999999999999999999999999 999999999988887643
Q ss_pred --eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee
Q psy3710 228 --LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 305 (424)
.....+..++ ..+++++.|+.+++||...+. ....+.+|...|++++|+|+|++|++++.|+. |++||+.+++..
T Consensus 283 ~~~~~~~~~~~~-~~l~s~s~d~~i~~~~~~~~~-~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~-v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 283 IEDQQLGIIWTK-QALVSISANGFINFVNPELGS-IDQVRYGHNKAITALSSSADGKTLFSADAEGH-INSWDISTGISN 359 (611)
T ss_dssp GGGCEEEEEECS-SCEEEEETTCCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEE
T ss_pred ccceeEEEEEcC-CEEEEEeCCCcEEEEeCCCCC-cceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc-EEEEECCCCcee
Confidence 1112222244 445569999999999998765 44566799999999999999999999999999 999999987765
Q ss_pred eee-------------ccCCcEEEEEeCCCcEEEEEccccccccc-----------------------------------
Q psy3710 306 NEL-------------RRDSSYLCVSSDHGTVHVFSVDEAQKINK----------------------------------- 337 (424)
Q Consensus 306 ~~~-------------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~----------------------------------- 337 (424)
..+ +++ ..+++++.|+.+++|++.++.....
T Consensus 360 ~~~~~~h~~~v~~~~~s~~-~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~ 438 (611)
T 1nr0_A 360 RVFPDVHATMITGIKTTSK-GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 438 (611)
T ss_dssp ECSSCSCSSCEEEEEECTT-SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEE
T ss_pred eecccCCcceEEEEEECCC-CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEe
Confidence 432 333 4677888888888888765432110
Q ss_pred ---------cccceeeeccCcc----------ccCCceee-------EEeecCCCceEEEEecCCCeEEEEeccCcEEEE
Q psy3710 338 ---------QSSLASASFLPKY----------FSSSWSFC-------KFQIPSDPPCICAFGADSNSIIVICADGSYYKF 391 (424)
Q Consensus 338 ---------~~~~~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~ 391 (424)
......+.+.|.- .-..|++. ....|...+..++|+|||++|++++.|++|++|
T Consensus 439 ~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w 518 (611)
T 1nr0_A 439 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPY 518 (611)
T ss_dssp TTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEE
Confidence 0001123333331 00113321 124578899999999999999999999999999
Q ss_pred EecCCcceeee-------eehhhheecCCCceeeEEE
Q psy3710 392 MFNSKGECWRD-------VYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 392 ~~~~~~~~~~~-------~~~~~~~~~~d~~~l~~~~ 421 (424)
++...+++... .....+.|+|||++|+++.
T Consensus 519 ~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs 555 (611)
T 1nr0_A 519 SVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 555 (611)
T ss_dssp EGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEE
T ss_pred EcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEE
Confidence 99854555432 2345688999999999874
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.9e-49 Score=374.79 Aligned_cols=395 Identities=15% Similarity=0.208 Sum_probs=315.7
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.+|+||++.|++++|||||++||+|+.++ |+|||. +++.+.....|.+.|.+++|+|++++|++++ .|++|
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~-------~d~~i 81 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS-------DDKTV 81 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEE-------TTSCE
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEe-------CCCEE
Confidence 45899999999999999999999999988 999995 5666666778999999999999999999988 58999
Q ss_pred EEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEe----------------------
Q psy3710 83 MIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFE---------------------- 136 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~---------------------- 136 (424)
++||. +++.+..+. |...|.+++|+|++..+++ |+.+++|+... . ......
T Consensus 82 ~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~-~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 158 (577)
T 2ymu_A 82 KLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVWGVAFSPDGQTIASAS 158 (577)
T ss_dssp EEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC-C-EEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeeccccc-c-eeeeccCCCCceeeeeeecCCccceecc
Confidence 99996 678888887 8999999999999988876 88999998631 1 111110
Q ss_pred -----------------eCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCE
Q psy3710 137 -----------------TNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR 199 (424)
Q Consensus 137 -----------------~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 199 (424)
.......+..+.++|+++++++ ++.|+.|++||... +....+.+|...|.+++|+|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~s~dg~~ 235 (577)
T 2ymu_A 159 DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIAS-ASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQT 235 (577)
T ss_dssp TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEE-EETTSEEEEECTTS--CEEEEEECCSSCEEEEEECTTSSC
T ss_pred cccceeccccceeeeeeccCCCcceeeeeecCCCCEEEE-EcCCCEEEEEeCCC--cEEEEEecCCCCEEEEEECCCCCE
Confidence 0112234667889999999998 99999999999754 667788899999999999999999
Q ss_pred EEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEE
Q psy3710 200 LATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIA 276 (424)
Q Consensus 200 l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 276 (424)
|++++.|+. |++||. +++.+..+..+ +..++++|++..++. ++.|+.|++||... .....+.+|...|.+++
T Consensus 236 l~~~~~d~~-i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~-~~~d~~i~~w~~~~--~~~~~~~~h~~~v~~~~ 310 (577)
T 2ymu_A 236 IASASDDKT-VKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIAS-ASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVA 310 (577)
T ss_dssp EEEEETTSC-EEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTS--CEEEEECCCSSCEEEEE
T ss_pred EEEEeCCCE-EEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEE-EeCCCEEEEEeCCC--cEEEEEecCCCCeEEEE
Confidence 999999999 999996 45666666544 677899998887665 89999999999754 34566779999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEECCCCceee-----------eeccCCcEEEEEeCCCcEEEEEccccccccccc----cc
Q psy3710 277 LNQTGTRLATASYKGTLIRVFDTGSGQKLN-----------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQS----SL 341 (424)
Q Consensus 277 ~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~-----------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~ 341 (424)
|+|++++|++++.|+. |++||........ .++|++++|++++.|+.|++|+... +.+.... .+
T Consensus 311 ~~~~~~~l~t~~~d~~-i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~~~~~~~~~~~v 388 (577)
T 2ymu_A 311 FSPDGQTIASASDDKT-VKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSV 388 (577)
T ss_dssp ECTTSSEEEEEETTSC-EEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-CEEEEEECCSSCE
T ss_pred ECCCCCEEEEEeCCCe-EEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CEEEEecCCCCCe
Confidence 9999999999999999 9999987554321 3678999999999999999999654 4443332 23
Q ss_pred eeeeccCcc-------c--------cCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeee----
Q psy3710 342 ASASFLPKY-------F--------SSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRD---- 402 (424)
Q Consensus 342 ~~~~~~~~~-------~--------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~---- 402 (424)
..+.|.|.. . ........+..|...+..++|+||+++|++++.|+.|++|+.. +++.+.
T Consensus 389 ~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~ 466 (577)
T 2ymu_A 389 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTGH 466 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcCC
Confidence 344555431 0 0111233466788999999999999999999999999999964 444442
Q ss_pred -eehhhheecCCCceeeEEE
Q psy3710 403 -VYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 403 -~~~~~~~~~~d~~~l~~~~ 421 (424)
.....+.++||+++|+++.
T Consensus 467 ~~~v~~~~~spd~~~las~~ 486 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASAS 486 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEe
Confidence 2235678999999999874
No 3
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-50 Score=382.61 Aligned_cols=355 Identities=12% Similarity=0.159 Sum_probs=289.7
Q ss_pred ccccccCCceEEEEECCCCC-eeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCe
Q psy3710 4 GTSSTYKNGLLYAGFNQDQG-CFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR 81 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~-~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~ 81 (424)
..+.+|.+.|++++|+|++. .|++|+.|+ |++||..+++.......|.+.|.+++|+|+++++++++ .|++
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s-------~D~~ 213 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG-------GDGT 213 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE-------CCCc
Confidence 45789999999999999997 589999988 99999988877766777899999999999999999988 6899
Q ss_pred EEEEECCCCcEEEEE--------eecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCC-CCeeEEEee
Q psy3710 82 VMIWDDLKKQVVICL--------EFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPN-PKGLCVLCP 149 (424)
Q Consensus 82 i~iwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 149 (424)
|++||..+++.+..+ .|.+.|.+++|+|++..+++ |++|++||+. +++.+..+..+.. ......+.+
T Consensus 214 i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 214 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA-TLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSGGGCEEEEEE
T ss_pred EEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC-CCceeeeecCCCCccceeEEEEE
Confidence 999999999998877 47889999999999987776 8999999996 6777777654321 122444555
Q ss_pred cCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe----
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR---- 225 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~---- 225 (424)
++..+++ ++.|+.+++||...+ .....+.+|...|.+++|+|+|++|++++.|+. |++||+.+++....+.
T Consensus 293 --~~~~l~s-~s~d~~i~~~~~~~~-~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~-v~~Wd~~~~~~~~~~~~~h~ 367 (611)
T 1nr0_A 293 --TKQALVS-ISANGFINFVNPELG-SIDQVRYGHNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRVFPDVHA 367 (611)
T ss_dssp --CSSCEEE-EETTCCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEECSSCSCS
T ss_pred --cCCEEEE-EeCCCcEEEEeCCCC-CcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc-EEEEECCCCceeeecccCCc
Confidence 5777887 999999999999875 456677899999999999999999999999999 9999998764322110
Q ss_pred --------------------------------------------------------------------------------
Q psy3710 226 -------------------------------------------------------------------------------- 225 (424)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (424)
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence
Q ss_pred -cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCC-Cc
Q psy3710 226 -RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS-GQ 303 (424)
Q Consensus 226 -~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~-~~ 303 (424)
..+..++++|++..++. |+.|+.|++||+...........+|...|++++|+|||++|++++.|++ |++|++.+ ++
T Consensus 448 ~~~v~~va~spdg~~las-gs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~-v~~w~~~~~~~ 525 (611)
T 1nr0_A 448 SYNSSCVALSNDKQFVAV-GGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK-VIPYSVANNFE 525 (611)
T ss_dssp SSCEEEEEECTTSCEEEE-EETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEEGGGTTE
T ss_pred CCCceEEEEeCCCCEEEE-eCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCC-EEEEEcCCCCc
Confidence 01245677888776654 9999999999998754211122589999999999999999999999999 99999986 43
Q ss_pred eee--------------eeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeec-CCCce
Q psy3710 304 KLN--------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIP-SDPPC 368 (424)
Q Consensus 304 ~~~--------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 368 (424)
.+. .|+|+|++|++++.|++|++|++.+++... ......| .+.+.
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~--------------------~~~~~~h~~~~v~ 585 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP--------------------IIIKGAHAMSSVN 585 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC--------------------EEETTSSTTSCEE
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccccc--------------------chhhccCcccCee
Confidence 322 378999999999999999999998754211 0011234 56789
Q ss_pred EEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 369 ICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 369 ~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
.++|+|+++ |++++.||+|++|++.
T Consensus 586 ~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 586 SVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999998 9999999999999973
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2e-48 Score=369.01 Aligned_cols=368 Identities=16% Similarity=0.231 Sum_probs=310.4
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
...|...|.+++|+|++++|++++.++ |++|+.. ++.......|.+.+.+++|+|+++.+++++ .|+.|++
T Consensus 176 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-------~d~~i~~ 247 (577)
T 2ymu_A 176 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASAS-------DDKTVKL 247 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTSSCEEEEE-------TTSCEEE
T ss_pred ccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC-CcEEEEEecCCCCEEEEEECCCCCEEEEEe-------CCCEEEE
Confidence 567899999999999999999999988 9999964 455555667889999999999999999988 5899999
Q ss_pred EECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee
Q psy3710 85 WDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 85 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (424)
||. +++.+..+. |...|.+++|+|++..+++ ++.|++|+. ..+.+..+..|.. .+.+++++|+++.+++ +
T Consensus 248 w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~--~~~~~~~~~~h~~--~v~~~~~~~~~~~l~t-~ 321 (577)
T 2ymu_A 248 WNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSS--SVWGVAFSPDGQTIAS-A 321 (577)
T ss_dssp ECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET--TSCEEEEECCCSS--CEEEEEECTTSSEEEE-E
T ss_pred EeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC--CCcEEEEEecCCC--CeEEEEECCCCCEEEE-E
Confidence 996 567777776 8899999999999977765 889999996 4667777777764 4888999999999998 9
Q ss_pred ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCC
Q psy3710 161 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNN 237 (424)
Q Consensus 161 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~ 237 (424)
+.|+.|++||+.. .....+.+|...|.+++|+|+++++++++.|+. |++||. +++.+..+..+ +..++++|++
T Consensus 322 ~~d~~i~~w~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg 397 (577)
T 2ymu_A 322 SDDKTVKLWNRNG--QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG 397 (577)
T ss_dssp ETTSCEEEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TCCEEEEEECCSSCEEEEEECTTS
T ss_pred eCCCeEEEEeCCC--CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEcC-CCCEEEEecCCCCCeEEEEECCCC
Confidence 9999999999876 456678899999999999999999999999999 999995 56677776644 7788999998
Q ss_pred CeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceee-----------
Q psy3710 238 SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN----------- 306 (424)
Q Consensus 238 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~----------- 306 (424)
..++. ++.|+.|++||... .....+.+|...|++++|+||+++|++++.|+. |++||.. ++.+.
T Consensus 398 ~~l~~-~~~d~~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~~-~~~~~~~~~~~~~v~~ 472 (577)
T 2ymu_A 398 QTIAS-ASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNRN-GQLLQTLTGHSSSVRG 472 (577)
T ss_dssp SCEEE-EETTSEEEEECTTC--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETT-SCEEEEEECCSSCEEE
T ss_pred CEEEE-EeCCCEEEEEeCCC--CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEECC-CCEEEEEcCCCCCEEE
Confidence 87765 89999999999643 345677799999999999999999999999999 9999975 44433
Q ss_pred -eeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEecc
Q psy3710 307 -ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICAD 385 (424)
Q Consensus 307 -~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d 385 (424)
.|+|++++|++++.|+.|++||.. ++.+ ..+..|...|+.++|+||+++|++++.|
T Consensus 473 ~~~spd~~~las~~~d~~i~iw~~~-~~~~----------------------~~~~~h~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 473 VAFSPDGQTIASASDDKTVKLWNRN-GQLL----------------------QTLTGHSSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETT-SCEE----------------------EEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEcCCCCEEEEEeCCCEEEEEcCC-CCEE----------------------EEEeCCCCCEEEEEEcCCCCEEEEEECc
Confidence 367899999999999999999964 3432 2355677889999999999999999999
Q ss_pred CcEEEEEecCCcceeeee-----ehhhheecCCCceeeEEE
Q psy3710 386 GSYYKFMFNSKGECWRDV-----YIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 386 g~v~~~~~~~~~~~~~~~-----~~~~~~~~~d~~~l~~~~ 421 (424)
|.|++|+. ++++++.. .+..+.|+|||++|+++.
T Consensus 530 g~v~lwd~--~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 530 KTVKLWNR--NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp SEEEEECT--TSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CEEEEEeC--CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 99999996 45555532 234678999999999874
No 5
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-48 Score=382.21 Aligned_cols=398 Identities=12% Similarity=0.110 Sum_probs=286.7
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
...+|.+.|++++|+|++++||+|+.++ |+||+....+...... |...|..++|+| +++|++++ .|++|+
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s-------~D~~v~ 82 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVIN-------AKDTVY 82 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEE-------TTCEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEE-------CcCeEE
Confidence 3568999999999999999999999999 9999987766543332 578899999999 77888887 589999
Q ss_pred EEECCCCcEEEEEeecCCeEEEEecCCceEEEe---eccEEEEeecCCCcee-----------EEEeeCCCCCeeEEEee
Q psy3710 84 IWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQL-----------HVFETNPNPKGLCVLCP 149 (424)
Q Consensus 84 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 149 (424)
+||+.+++.+..+.+...|.+++|+|++.++++ ||.|++||++ ..+.. ..+..|. ..+.+++|
T Consensus 83 lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~-~~~~~~~~i~~~~~~~~~~~~h~--~~V~sl~~ 159 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDID-RDQLSSFKLDNLQKSSFFPAARL--SPIVSIQW 159 (902)
T ss_dssp EEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETT-TTEEEEEEECCHHHHHTCSSSCC--CCCCEEEE
T ss_pred EEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECC-CCccccceeccccccccccccCC--CCeEEEEE
Confidence 999999999999988899999999999987776 8999999996 44432 1112233 45888999
Q ss_pred cCCC-CeEEEeeccCCeEEEEeCCCCCCCCccccc------------------ccCCeEEEEEccCCCEEEEEecCCcEE
Q psy3710 150 NSNN-SLLAFPGRKSGHVHLVDLADPERPPLDIAA------------------HEAPLSCIALNQTGTRLATASYKGTLI 210 (424)
Q Consensus 150 ~~~~-~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~d~~~i 210 (424)
+|++ ..+++ |+.||.| +||++++ +....+.. |...|.+++|+|+|++|++++.|+. |
T Consensus 160 sp~~~~~l~~-g~~dg~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i 235 (902)
T 2oaj_A 160 NPRDIGTVLI-SYEYVTL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-L 235 (902)
T ss_dssp ETTEEEEEEE-ECSSCEE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-E
T ss_pred ccCCCCEEEE-EeCCCcE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-E
Confidence 9965 56666 9999999 9999875 44444443 3578999999999999999999999 9
Q ss_pred EEEECCCcceeeE--E-------------------ecceeeeeec----CCCCeEEEE----------------------
Q psy3710 211 RVFDTGSGQKLNE--L-------------------RRGLCVLCPN----SNNSLLAFP---------------------- 243 (424)
Q Consensus 211 ~iwd~~~~~~~~~--~-------------------~~~~~~~~~~----~~~~~~~~~---------------------- 243 (424)
++||+++++++.. + ...+..++|+ |++..++++
T Consensus 236 ~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~ 315 (902)
T 2oaj_A 236 VFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPR 315 (902)
T ss_dssp EEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCC
T ss_pred EEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCC
Confidence 9999998876542 1 0123344442 222233333
Q ss_pred ------------------------------------------------------eecCCeEEEEeCCCCCCCC------e
Q psy3710 244 ------------------------------------------------------GRKSGHVHLVDLADPERPP------L 263 (424)
Q Consensus 244 ------------------------------------------------------~~~dg~i~i~d~~~~~~~~------~ 263 (424)
++.||.|++||+.++.... .
T Consensus 316 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~ 395 (902)
T 2oaj_A 316 YSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQ 395 (902)
T ss_dssp GGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCG
T ss_pred ccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCC
Confidence 3345667777765442110 0
Q ss_pred ee----------------------------------ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee----
Q psy3710 264 DI----------------------------------AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL---- 305 (424)
Q Consensus 264 ~~----------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~---- 305 (424)
.+ .+|...+.+++|+|++++|++|+.|++ |++||+.++...
T Consensus 396 ~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~Dgt-VrlWd~~~g~~~~~~~ 474 (902)
T 2oaj_A 396 NLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGS-VRIYDASHGDIQDNAS 474 (902)
T ss_dssp GGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSE-EEEEESSCCTTTTTBC
T ss_pred cccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCc-EEEEECCCccccCCce
Confidence 11 233334444556789999999999999 999999876421
Q ss_pred -------------------eeeccCCcEEEEEeCCCcEEEEEcccccccccc----ccceeeec-------c--------
Q psy3710 306 -------------------NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQ----SSLASASF-------L-------- 347 (424)
Q Consensus 306 -------------------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~-------~-------- 347 (424)
..|+|++++||+|+.||+|+||++.+++..... .......+ .
T Consensus 475 ~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (902)
T 2oaj_A 475 FEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVR 554 (902)
T ss_dssp EEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECG
T ss_pred EEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccc
Confidence 137899999999999999999999886421110 00000000 0
Q ss_pred ----CccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceee-----------eeehhhheec-
Q psy3710 348 ----PKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWR-----------DVYIQFLEMT- 411 (424)
Q Consensus 348 ----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~-----------~~~~~~~~~~- 411 (424)
+....+-..+..+..|.+.|+.++||||| +||+|+.||+|++||+. ++.++. ..++..++|+
T Consensus 555 ~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~-~~~~~~~~~~~~~~~gh~~~V~sv~Fs~ 632 (902)
T 2oaj_A 555 DRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRR-GPAIIYMENIREISGAQSACVTCIEFVI 632 (902)
T ss_dssp GGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETT-TTEEEEEEEGGGTCSSCCCCEEEEEEEE
T ss_pred ccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECC-CCeEEEEeehhHhccccccceEEEEEEE
Confidence 00000001134566789999999999999 99999999999999986 443332 1225567899
Q ss_pred ----CCC---ceeeEEE
Q psy3710 412 ----NDS---NLLSCIE 421 (424)
Q Consensus 412 ----~d~---~~l~~~~ 421 (424)
||| ++|+++.
T Consensus 633 ~~~~~Dg~~~~~l~sgs 649 (902)
T 2oaj_A 633 MEYGDDGYSSILMVCGT 649 (902)
T ss_dssp EECTTSSSEEEEEEEEE
T ss_pred EecCCCCCcceEEEEEe
Confidence 886 8888773
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.6e-48 Score=395.59 Aligned_cols=399 Identities=15% Similarity=0.168 Sum_probs=319.4
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
+.+|.+.|++++|+|+|++||+|+.++ |++||+.+++.......|.+.|.+++|+|+++++++++ .|++|++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-------~d~~v~v 683 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS-------ADKKVKI 683 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe-------CCCeEEE
Confidence 568999999999999999999999988 99999999988777778999999999999999999988 5899999
Q ss_pred EECCCCcEEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEE
Q psy3710 85 WDDLKKQVVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 85 wd~~~~~~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (424)
||+.+++.+..+. |...|.+++|+|+ +.++++ |+.|++||+. +++....+..|... +.+++|+|+++++++
T Consensus 684 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~-~~~~~~~~~~h~~~--v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN-QKECRNTMFGHTNS--VNHCRFSPDDELLAS 760 (1249)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT-SSSEEEEECCCSSC--EEEEEECSSTTEEEE
T ss_pred EECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC-CcchhheecCCCCC--EEEEEEecCCCEEEE
Confidence 9999999999988 8999999999994 445554 8999999997 77888888877754 889999999999998
Q ss_pred eeccCCeEEEEeCCCCCCC-----------------------------------------------------Cc-ccccc
Q psy3710 159 PGRKSGHVHLVDLADPERP-----------------------------------------------------PL-DIAAH 184 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~-----------------------------------------------------~~-~~~~~ 184 (424)
++.||.|++||+.++... .. ...+|
T Consensus 761 -~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 761 -CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp -EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred -EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 999999999998754100 00 01267
Q ss_pred cCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCC-----
Q psy3710 185 EAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLA----- 256 (424)
Q Consensus 185 ~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~----- 256 (424)
...|.+++|+|+++.+++++.|+. |++||+.+++.+..+..+ +..++++|++..++. ++.||.|++||+.
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s-~s~dg~v~vw~~~~~~~~ 917 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLT-ASDDQTIRVWETKKVCKN 917 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEEHHHHHSC
T ss_pred CCceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCCCccceEEEEECCCCCEEEE-EeCCCeEEEEEcccccee
Confidence 889999999999999999999999 999999998887777654 566777777665443 6667777777643
Q ss_pred --------------------------------------------------------------------------CCCCCC
Q psy3710 257 --------------------------------------------------------------------------DPERPP 262 (424)
Q Consensus 257 --------------------------------------------------------------------------~~~~~~ 262 (424)
++. ..
T Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-~~ 996 (1249)
T 3sfz_A 918 SAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-VF 996 (1249)
T ss_dssp CSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS-CE
T ss_pred eeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-ee
Confidence 222 23
Q ss_pred eeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee-----------eccCCcEEEEEeCCCcEEEEEccc
Q psy3710 263 LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 263 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~iw~~~~ 331 (424)
..+.+|...|++++|+|++++|++++.|+. |++||+.+++.... +.++ ..+++++.|+.|++||+.+
T Consensus 997 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~-i~vwd~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~v~vwd~~~ 1074 (1249)
T 3sfz_A 997 SSGVGHKKAVRHIQFTADGKTLISSSEDSV-IQVWNWQTGDYVFLQAHQETVKDFRLLQD-SRLLSWSFDGTVKVWNVIT 1074 (1249)
T ss_dssp EECCCCSSCCCCEEECSSSSCEEEECSSSB-EEEEETTTTEEECCBCCSSCEEEEEECSS-SEEEEEESSSEEEEEETTT
T ss_pred eecccCCCceEEEEECCCCCEEEEEcCCCE-EEEEECCCCceEEEecCCCcEEEEEEcCC-CcEEEEECCCcEEEEECCC
Confidence 345579999999999999999999999999 99999999876542 3454 4678899999999999999
Q ss_pred ccccccccc----ceeeeccCcc----------ccCCcee------eEEeecCCCceEEEEecCCCeEEEEeccCcEEEE
Q psy3710 332 AQKINKQSS----LASASFLPKY----------FSSSWSF------CKFQIPSDPPCICAFGADSNSIIVICADGSYYKF 391 (424)
Q Consensus 332 ~~~~~~~~~----~~~~~~~~~~----------~~~~~~~------~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~ 391 (424)
++....... .....+.|.. .-..|++ ..+..|.+.++.++|+||+++|++++.||.|++|
T Consensus 1075 ~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vw 1154 (1249)
T 3sfz_A 1075 GRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154 (1249)
T ss_dssp TCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEE
T ss_pred CceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 877654432 2333444431 0111332 2355678899999999999999999999999999
Q ss_pred EecCCcceeee--------------eehhhheecCCCceeeEEE
Q psy3710 392 MFNSKGECWRD--------------VYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 392 ~~~~~~~~~~~--------------~~~~~~~~~~d~~~l~~~~ 421 (424)
++. ++++... .....+.++|||++|++++
T Consensus 1155 d~~-~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1155 NVS-DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp ESS-SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred ECC-CCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 998 4443322 2345678999999998863
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-45 Score=378.91 Aligned_cols=391 Identities=14% Similarity=0.184 Sum_probs=302.9
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
..+.+|.+.|++++|+|+|++||+|+.++ |++||+.+++.......|.+.+.++.|+++++..++++++ .|+.|
T Consensus 651 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~-----~d~~v 725 (1249)
T 3sfz_A 651 LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS-----NDFFL 725 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE-----TTSCE
T ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe-----CCCeE
Confidence 34778999999999999999999999888 9999999998887778899999999999965543333333 58999
Q ss_pred EEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEee---------------------
Q psy3710 83 MIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFET--------------------- 137 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~--------------------- 137 (424)
++||+.+++.+..+. |...|.+++|+|++..+++ |+.|++||+. .++....+..
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVR-SANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGG-GTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCC-CCcccceecccccccccCCccccccceEEEE
Confidence 999999999998887 8999999999999977765 8999999986 3333222211
Q ss_pred --------------------------------CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccccc
Q psy3710 138 --------------------------------NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE 185 (424)
Q Consensus 138 --------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 185 (424)
..+...+.+++++|++..+++ ++.+|.|++||+.++ .....+.+|.
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~dg~v~vwd~~~~-~~~~~~~~h~ 882 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVI-ALSQYCVELWNIDSR-LKVADCRGHL 882 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEE-ECSSSCEEEEETTTT-EEEEEECCCS
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEE-EeCCCeEEEEEcCCC-ceeeecCCCc
Confidence 012234667889999999998 999999999999986 6777888999
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEECCCc-----------------------------------------------
Q psy3710 186 APLSCIALNQTGTRLATASYKGTLIRVFDTGSG----------------------------------------------- 218 (424)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~----------------------------------------------- 218 (424)
..|.+++|+|+++.+++++.|+. |++||+.+.
T Consensus 883 ~~v~~v~~spdg~~l~s~s~dg~-v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 883 SWVHGVMFSPDGSSFLTASDDQT-IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSC-EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred cceEEEEECCCCCEEEEEeCCCe-EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 99999999999999999999999 999985421
Q ss_pred --------------------------------ceeeEEec---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCC----
Q psy3710 219 --------------------------------QKLNELRR---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE---- 259 (424)
Q Consensus 219 --------------------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---- 259 (424)
+....+.. .+..++++|++..++. ++.||.|++||+.+++
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s-~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLIS-SSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEE-ECSSSBEEEEETTTTEEECC
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEE-EcCCCEEEEEECCCCceEEE
Confidence 11111111 1445677777665554 6666666666655421
Q ss_pred -----------------------------------CCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce
Q psy3710 260 -----------------------------------RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 260 -----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~ 304 (424)
.....+.+|...|.+++|+|+++++++++.|+. |++||+.++++
T Consensus 1041 ~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~-v~iwd~~~~~~ 1119 (1249)
T 3sfz_A 1041 QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKT-AKIWSFDLLSP 1119 (1249)
T ss_dssp BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSC-CCEECSSSSSC
T ss_pred ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCc-EEEEECCCcce
Confidence 123455678999999999999999999999999 99999988776
Q ss_pred ee------------eeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEE
Q psy3710 305 LN------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAF 372 (424)
Q Consensus 305 ~~------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (424)
+. .|+|++++|++++.||.|++||+.+++.+......... .....|.+.++.++|
T Consensus 1120 ~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~v~~l~f 1186 (1249)
T 3sfz_A 1120 LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVE-------------EGTATHGGWVTDVCF 1186 (1249)
T ss_dssp SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC--------------------CCSCCCEEEE
T ss_pred eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEecccccc-------------ccccccCceEEEEEE
Confidence 54 36789999999999999999999998876543221110 112346778999999
Q ss_pred ecCCCeEEEEeccCcEEEEEecCCcceeeee-----ehhhheecCCCceeeEEE
Q psy3710 373 GADSNSIIVICADGSYYKFMFNSKGECWRDV-----YIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 373 s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~-----~~~~~~~~~d~~~l~~~~ 421 (424)
+||+++|++++ |.|++|++. .+++.... ....+.++|||++|++++
T Consensus 1187 s~dg~~l~s~~--g~v~vwd~~-~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1187 SPDSKTLVSAG--GYLKWWNVA-TGDSSQTFYTNGTNLKKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp CTTSSCEEEES--SSEEEBCSS-SCBCCCCCCCSSCCCCCCEECSSSCCEEEEC
T ss_pred CCCCCEEEECC--CeEEEEECC-CCceeeeeeccCCcccEEEECCCCCEEEEec
Confidence 99999999886 899999997 45544432 345688999999999874
No 8
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.9e-45 Score=349.14 Aligned_cols=402 Identities=12% Similarity=0.129 Sum_probs=292.9
Q ss_pred ccccccCCc-eEEEEECC--CCCeeEeecCCe-EEEEeCCcC--------cccccccccCCCeeeEEEeccCceEEEEeC
Q psy3710 4 GTSSTYKNG-LLYAGFNQ--DQGCFACGMEDG-FRIYNCDPL--------KEKERQDFTDGGLGHVEMLFRCNYLALVGG 71 (424)
Q Consensus 4 ~~l~~h~~~-V~~~~~s~--~g~~la~g~~~~-i~iw~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 71 (424)
..+.+|.+. |++++|+| ++++||+|+.++ |++||+.++ +.......|.+.+..++|+|+++++++++.
T Consensus 57 ~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 136 (615)
T 1pgu_A 57 VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 136 (615)
T ss_dssp EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEecc
Confidence 347889999 99999999 999999999888 999999755 334445567899999999999999999884
Q ss_pred CcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCce-EEEe---eccEEEEeecCCCceeEEEeeCCCC-CeeE
Q psy3710 72 GTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKI-VVVL---EGLIKVYTFIQCPQQLHVFETNPNP-KGLC 145 (424)
Q Consensus 72 ~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~-~~~~ 145 (424)
... ..+.|++|| +++.+..+. |...|.+++|+|++. .+++ |+.|++||+. ..+.+..+..|... ..+.
T Consensus 137 ~~~---~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~~~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 137 GRD---NFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP-PFKFSASDRTHHKQGSFVR 210 (615)
T ss_dssp CSS---CSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT-TBEEEEEECSSSCTTCCEE
T ss_pred CCC---CccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC-CcceeeeecccCCCCceEE
Confidence 310 015777777 677777777 889999999999985 4443 8999999986 77888888877641 1488
Q ss_pred EEeecCC-CCeEEEeeccCCeEEEEeCCCCCCCCccc-c---cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce
Q psy3710 146 VLCPNSN-NSLLAFPGRKSGHVHLVDLADPERPPLDI-A---AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK 220 (424)
Q Consensus 146 ~~~~~~~-~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~ 220 (424)
+++|+|+ ++++++ ++.||.|++||+.++ +.+..+ . .|...|.+++|+ ++++|++++.|+. |++||+++++.
T Consensus 211 ~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~-i~~wd~~~~~~ 286 (615)
T 1pgu_A 211 DVEFSPDSGEFVIT-VGSDRKISCFDGKSG-EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADAT-IRVWDVTTSKC 286 (615)
T ss_dssp EEEECSTTCCEEEE-EETTCCEEEEETTTC-CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSE-EEEEETTTTEE
T ss_pred EEEECCCCCCEEEE-EeCCCeEEEEECCCC-CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCc-EEEEECCCCcE
Confidence 9999999 999998 999999999999986 566666 5 899999999999 9999999999999 99999999998
Q ss_pred eeEEecc-------eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCC----------------------
Q psy3710 221 LNELRRG-------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAP---------------------- 271 (424)
Q Consensus 221 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------------------- 271 (424)
+..+..+ ...+.+ +++. .+++++.+|.|++||+.+++ +...+.+|...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~-~~~~-~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVA-TGNG-RIISLSLDGTLNFYELGHDE-VLKTISGHNKGITALTVNPLISGSYDGRIMEWS 363 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEE-EETT-EEEEEETTSCEEEEETTEEE-EEEEECCCSSCEEEEETTTTEEEETTSCEEETT
T ss_pred EEEEcCCCCcccCceeEEEe-CCCC-eEEEEECCCCEEEEECCCCc-EEEEEeCCCCCEEEEEecCcEEECCCCeEEEEE
Confidence 8887754 233444 3444 45558999999999988643 23334444444
Q ss_pred -----------eEEEEEcCCCCEEEEEeCCCcEEEEEECCCC----------------------------------ceee
Q psy3710 272 -----------LSCIALNQTGTRLATASYKGTLIRVFDTGSG----------------------------------QKLN 306 (424)
Q Consensus 272 -----------v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~----------------------------------~~~~ 306 (424)
|.+++| +++..|++++.|+. |++||+.++ +.+.
T Consensus 364 ~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~-i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (615)
T 1pgu_A 364 SSSMHQDHSNLIVSLDN-SKAQEYSSISWDDT-LKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 441 (615)
T ss_dssp TTEEECCCCSCEEEEEC-CSTTCCEEEETTTE-EEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred chhhcCcccCceEEEEE-CCCcEEEEEeCCCC-EEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceee
Confidence 444444 33566666666666 666665432 1211
Q ss_pred eec---------cCCcEEEEEeC-CCcEEEEEccccccc-cc----cccceeeeccCcc-------ccC---Ccee----
Q psy3710 307 ELR---------RDSSYLCVSSD-HGTVHVFSVDEAQKI-NK----QSSLASASFLPKY-------FSS---SWSF---- 357 (424)
Q Consensus 307 ~~~---------~~~~~l~~~~~-d~~i~iw~~~~~~~~-~~----~~~~~~~~~~~~~-------~~~---~~~~---- 357 (424)
.+. -.++++++++. |+.|++||+.+++.. .. ........+.|.. .++ .|++
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 442 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp EEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence 111 01667777777 888888888775442 11 1223334444431 000 1221
Q ss_pred --eEEee-cCCCceEEEEec----------CCCeEEEEeccCcEEEEEecCCcceeee-----eehhhheecCCCceeeE
Q psy3710 358 --CKFQI-PSDPPCICAFGA----------DSNSIIVICADGSYYKFMFNSKGECWRD-----VYIQFLEMTNDSNLLSC 419 (424)
Q Consensus 358 --~~~~~-~~~~~~~~~~s~----------~~~~l~~~~~dg~v~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~l~~ 419 (424)
..+.. |...++.++|+| ++++|++++.||.|++|++....++... .....+.++||++ |++
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVS 600 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEE
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEE
Confidence 12233 778899999999 9999999999999999999855455543 2345678999999 777
Q ss_pred EE
Q psy3710 420 IE 421 (424)
Q Consensus 420 ~~ 421 (424)
+.
T Consensus 601 ~~ 602 (615)
T 1pgu_A 601 SG 602 (615)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 9
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.6e-45 Score=358.20 Aligned_cols=398 Identities=14% Similarity=0.188 Sum_probs=317.9
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
.+.+|.+.|++++|+|+|++||+|+.++ |+|||+.+++.......|.+.|.+++|+|+++.+++++ .|+.|+
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~ 80 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-------DDFRIR 80 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-------TTSEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-------CCCeEE
Confidence 3789999999999999999999999888 99999999888777788899999999999999999988 589999
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecC-CCCeEEE
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNS-NNSLLAF 158 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 158 (424)
+||+.+++.+..+. |...|.+++|+|++..+++ |+.|++|++.........+..|..+ +.+++|+| ++..+++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~--v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--VMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSC--EEEEEEETTEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCc--EEEEEEEcCCCCEEEE
Confidence 99999999999988 8999999999999976665 8999999997444667777777644 88899999 7788887
Q ss_pred eeccCCeEEEEeCCCCCCCCcccccc-cCCeEEEEEcc--CCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeee
Q psy3710 159 PGRKSGHVHLVDLADPERPPLDIAAH-EAPLSCIALNQ--TGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLC 232 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~ 232 (424)
++.||.|++||+.++ .....+..+ ...+..++|+| ++.++++++.|+. |++||+++++.+..+..+ +..++
T Consensus 159 -~~~dg~v~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~v~~~~ 235 (814)
T 3mkq_A 159 -GCLDRTVKVWSLGQS-TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEGHMSNVSFAV 235 (814)
T ss_dssp -EETTSEEEEEETTCS-SCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred -EeCCCeEEEEECCCC-cceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 999999999999876 455555544 48999999999 9999999999999 999999999988888754 77889
Q ss_pred ecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEEECCCCce-------
Q psy3710 233 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR-LATASYKGTLIRVFDTGSGQK------- 304 (424)
Q Consensus 233 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~~i~iwd~~~~~~------- 304 (424)
++|++..++. ++.||.|++||+.+++ ....+..|...+.+++|+|++.. +++++.++. +.+|++..+..
T Consensus 236 ~~~~~~~l~~-~~~dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 312 (814)
T 3mkq_A 236 FHPTLPIIIS-GSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGNDEPTLSLDPV 312 (814)
T ss_dssp ECSSSSEEEE-EETTSCEEEEETTTCS-EEEEECCSSSSEEEEEECTTCGGGEEEEEETTE-EEEEECSCCSCCEEECSS
T ss_pred EcCCCCEEEE-EeCCCeEEEEECCCCc-EEEEeecCCCcEEEEEEccCCCceEEEEEeCCC-EEEEEcCCCCceeEECCC
Confidence 9999886654 8999999999998865 45566788899999999999873 244444555 88888754211
Q ss_pred ---e---------------------------------------------eeeccCCcEEEEEeCCCcEEEEEcccccccc
Q psy3710 305 ---L---------------------------------------------NELRRDSSYLCVSSDHGTVHVFSVDEAQKIN 336 (424)
Q Consensus 305 ---~---------------------------------------------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~ 336 (424)
+ ..++|+|+++++++ |+.+.+|++......
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~- 390 (814)
T 3mkq_A 313 GKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNK- 390 (814)
T ss_dssp SEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEE-
T ss_pred CCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccccc-
Confidence 1 12568999999988 899999998653321
Q ss_pred ccccceeeeccCcc-------ccCC-ceeeEEeecCCCceEEEEecCC---CeEEEEeccCcEEEEEecCCcceeeee--
Q psy3710 337 KQSSLASASFLPKY-------FSSS-WSFCKFQIPSDPPCICAFGADS---NSIIVICADGSYYKFMFNSKGECWRDV-- 403 (424)
Q Consensus 337 ~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~s~~~---~~l~~~~~dg~v~~~~~~~~~~~~~~~-- 403 (424)
.........|.|.. ..+. ..+..+..+...+..++|+|++ ++|++++.||.|++|++. .+++++..
T Consensus 391 ~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~-~~~~~~~~~~ 469 (814)
T 3mkq_A 391 AFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWD-NGTLVRRIDV 469 (814)
T ss_dssp EEEECSEEEECTTSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTT-TCCEEEEESS
T ss_pred CCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCCEEEEEECC-cCcEEEEEec
Confidence 12223334444431 0111 1111234566788899999998 689999999999999997 45554422
Q ss_pred ehhhheecCCCceeeEE
Q psy3710 404 YIQFLEMTNDSNLLSCI 420 (424)
Q Consensus 404 ~~~~~~~~~d~~~l~~~ 420 (424)
....+.++|||++|+.+
T Consensus 470 ~~~~v~~s~dg~~la~~ 486 (814)
T 3mkq_A 470 NAKDVIWSDNGELVMIV 486 (814)
T ss_dssp CEEEEEECTTSSEEEEE
T ss_pred CCCEEEEcCCCCEEEEE
Confidence 22378899999999988
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-45 Score=329.60 Aligned_cols=280 Identities=15% Similarity=0.205 Sum_probs=252.0
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
.+.+|.++|++++|+|++.+|++|+.|+ |+|||+.+++.......|.+.|.+++|+|+++++++++ .|++|+
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs-------~D~~i~ 175 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS-------ADMTIK 175 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCCC
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe-------CCCeEE
Confidence 4779999999999999999999999998 99999999988777888999999999999999999888 689999
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
+||+.+++.+..+. |...|.+++|+|++..+++ |+.|++||+. ++..+..+..|... +.++.++|++.++++
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~-~~~~~~~~~~h~~~--v~~~~~~~~g~~l~s- 251 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ-TGYCVKTFTGHREW--VRMVRPNQDGTLIAS- 251 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSC--EEEEEECTTSSEEEE-
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCcEEEEEeCCCcc--EEEEEECCCCCEEEE-
Confidence 99999999998887 8999999999999977765 8999999997 77888888887744 888999999999998
Q ss_pred eccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccC--------------------CCEEEEEecCCcEEEEEECCCcc
Q psy3710 160 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT--------------------GTRLATASYKGTLIRVFDTGSGQ 219 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~~i~iwd~~~~~ 219 (424)
|+.|+.|++||+.++ .....+.+|...|.+++|+|+ +.+|++++.|+. |++||+++++
T Consensus 252 ~s~D~~v~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~ 329 (410)
T 1vyh_C 252 CSNDQTVRVWVVATK-ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGM 329 (410)
T ss_dssp EETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTE
T ss_pred EcCCCeEEEEECCCC-ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCc
Confidence 999999999999986 667788899999999999996 678999999999 9999999999
Q ss_pred eeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy3710 220 KLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRV 296 (424)
Q Consensus 220 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~i 296 (424)
++..+.++ +..++++|++..++ +|+.|+.|++||+.+++ ....+.+|...|++++|+|++.+|++|+.|++ |++
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~D~~i~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~-i~v 406 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-VKV 406 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEE-EEETTTEEEEECCTTSC-CCEEEECCSSCEEEEEECSSSSCEEEEETTSE-EEE
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCc-eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCc-EEE
Confidence 99888765 67889999888776 49999999999998766 46677899999999999999999999999999 999
Q ss_pred EECC
Q psy3710 297 FDTG 300 (424)
Q Consensus 297 wd~~ 300 (424)
|+++
T Consensus 407 W~~r 410 (410)
T 1vyh_C 407 WECR 410 (410)
T ss_dssp EC--
T ss_pred EeCC
Confidence 9864
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-44 Score=319.22 Aligned_cols=278 Identities=18% Similarity=0.247 Sum_probs=246.8
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
++.+|.+.|++++|+|++++|++|+.++ |++||..+++.......|...+..++|+|+++++++++ .|+.++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~d~~v~ 122 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-------LDNICS 122 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-------TTCEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-------CCCeEE
Confidence 4789999999999999999999999999 99999998888777777899999999999999999888 689999
Q ss_pred EEECCCCc----EEEEEe-ecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeE
Q psy3710 84 IWDDLKKQ----VVICLE-FNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 84 iwd~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (424)
+|++.+++ ....+. |.+.|.++.|++++.++.. |+.|++||+. +++.+..+..|... +.+++++|+++++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~h~~~--v~~~~~~~~~~~l 199 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIE-TGQQTTTFTGHTGD--VMSLSLAPDTRLF 199 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETT-TTEEEEEECCCSSC--EEEEEECTTSSEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECC-CCcEEEEEcCCCCc--eEEEEECCCCCEE
Confidence 99998753 444555 7899999999999876655 8999999996 77888888877744 8899999999999
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec-----ceeee
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR-----GLCVL 231 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~-----~~~~~ 231 (424)
++ |+.|+.|++||++++ .....+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+.. .+..+
T Consensus 200 ~s-g~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 200 VS-GACDASAKLWDVREG-MCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp EE-EETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EE-EeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEE
Confidence 98 999999999999986 677788999999999999999999999999999 99999999888777653 36788
Q ss_pred eecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEE
Q psy3710 232 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298 (424)
Q Consensus 232 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 298 (424)
+++|++..++. |+.|+.|++||+.+.+ ....+.+|..+|.+++|+|+|++|++|+.|+. |++||
T Consensus 277 ~~s~~g~~l~~-g~~d~~i~vwd~~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~-i~iWd 340 (340)
T 1got_B 277 SFSKSGRLLLA-GYDDFNCNVWDALKAD-RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF-LKIWN 340 (340)
T ss_dssp EECTTSSEEEE-EETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSCEEEEETTSC-EEEEC
T ss_pred EECCCCCEEEE-ECCCCeEEEEEcccCc-EeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc-EEecC
Confidence 99999887765 9999999999998765 35667899999999999999999999999999 99996
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-44 Score=314.59 Aligned_cols=280 Identities=12% Similarity=0.199 Sum_probs=245.5
Q ss_pred cccccCCceEEEEECCC----CCeeEeecCCe-EEEEeCCcCcc--cccccccCCCeeeEEEeccCceEEEEeCCcCCCc
Q psy3710 5 TSSTYKNGLLYAGFNQD----QGCFACGMEDG-FRIYNCDPLKE--KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~----g~~la~g~~~~-i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 77 (424)
.+.+|.+.|++++|+|+ +.+|++|+.|+ |+||++...+. ......|...|.++++++++..+++++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s------- 99 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS------- 99 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-------
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-------
Confidence 46799999999999985 57899999999 99999876654 334566899999999999999999888
Q ss_pred CCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCC
Q psy3710 78 PNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (424)
.|++|++||+.+++.+..+. +...+.+++|+|++.++++ ++.|++|+++ .++....+..+. ..+.+++|+|++
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~-~~~~~~~~~~~~--~~v~~~~~spdg 176 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE-SGKKEYSLDTRG--KFILSIAYSPDG 176 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT-TCSEEEEEECSS--SCEEEEEECTTS
T ss_pred CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC-CCceeEEecCCC--ceEEEEEECCCC
Confidence 68999999999999999887 6788999999999988876 8999999997 667777777665 348899999999
Q ss_pred CeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eee
Q psy3710 154 SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCV 230 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~ 230 (424)
++|++ |+.||.|++||++++ +.+..+.+|..+|.+++|+|++++|++++.|+. |++||+++++....+..+ +..
T Consensus 177 ~~las-g~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 177 KYLAS-GAIDGIINIFDIATG-KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp SEEEE-EETTSCEEEEETTTT-EEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECCCSSCEEE
T ss_pred CEEEE-EcCCCeEEEEECCCC-cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcCCCCceEE
Confidence 99998 999999999999986 677788999999999999999999999999999 999999999988888765 678
Q ss_pred eeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
++++|++..++ +++.|+.|++||+++++ ....+.+|...|.+++|+|++++|++++.|+. |++||..
T Consensus 254 ~~~sp~~~~l~-s~s~D~~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~-i~vwd~p 320 (321)
T 3ow8_A 254 VAFCPDDTHFV-SSSSDKSVKVWDVGTRT-CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE-IHIYDCP 320 (321)
T ss_dssp EEECTTSSEEE-EEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCC-EEEEECC
T ss_pred EEECCCCCEEE-EEeCCCcEEEEeCCCCE-EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEeCC
Confidence 89999988665 59999999999998866 35667789999999999999999999999999 9999964
No 13
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.9e-43 Score=337.46 Aligned_cols=395 Identities=11% Similarity=0.077 Sum_probs=306.9
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCeEEEEeCCcC----cccccccccCCC-eeeEEEec--cCceEEEEeCCcCCCcC
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPL----KEKERQDFTDGG-LGHVEMLF--RCNYLALVGGGTHPKYP 78 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~----~~~~~~~~~~~~-i~~~~~~~--~~~~l~~~~~~~~~~~~ 78 (424)
...|.+.|++++|+|+|++||+++++.|++|+++++ +.......|.+. |.+++|+| +++++++++ .
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-------~ 86 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-------E 86 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-------T
T ss_pred CCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-------C
Confidence 457999999999999999999999666999999988 676667778899 99999999 999999988 5
Q ss_pred CCeEEEEECCCC--------cEEEEEe-ecCCeEEEEecCCceEEEe---e----ccEEEEeecCCCceeEEEeeCCCCC
Q psy3710 79 NNRVMIWDDLKK--------QVVICLE-FNAPVKGVRLRRDKIVVVL---E----GLIKVYTFIQCPQQLHVFETNPNPK 142 (424)
Q Consensus 79 d~~i~iwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~~~~---~----~~i~v~~~~~~~~~~~~~~~~~~~~ 142 (424)
|+.|++||+.++ +.+..+. |...|.+++|+|++..+++ + +.|.+|| ..+.+..+..|..
T Consensus 87 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d---~~~~~~~~~~~~~-- 161 (615)
T 1pgu_A 87 SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD---SGNSLGEVSGHSQ-- 161 (615)
T ss_dssp TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT---TCCEEEECCSCSS--
T ss_pred CCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE---CCCcceeeecCCc--
Confidence 899999999755 5566666 7899999999999987776 3 5777777 4566777777664
Q ss_pred eeEEEeecCCCC-eEEEeeccCCeEEEEeCCCCCCCCcccccccC---CeEEEEEccC-CCEEEEEecCCcEEEEEECCC
Q psy3710 143 GLCVLCPNSNNS-LLAFPGRKSGHVHLVDLADPERPPLDIAAHEA---PLSCIALNQT-GTRLATASYKGTLIRVFDTGS 217 (424)
Q Consensus 143 ~~~~~~~~~~~~-~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~~i~iwd~~~ 217 (424)
.+.+++|+|+++ .+++ ++.|+.|++||+.+. +....+.+|.. .|.+++|+|+ +++|++++.|+. |++||+++
T Consensus 162 ~v~~~~~~~~~~~~l~~-~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~ 238 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMT-VGDDGSVVFYQGPPF-KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKS 238 (615)
T ss_dssp CEEEEEECSSSSCEEEE-EETTTEEEEEETTTB-EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTT
T ss_pred cEEEEEECCCCCcEEEE-EeCCCcEEEEeCCCc-ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCC
Confidence 488999999998 5665 999999999999876 66778888999 9999999999 999999999999 99999999
Q ss_pred cceeeEE-e---cc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccC----CCCeEEEEEcCCCCEEEE
Q psy3710 218 GQKLNEL-R---RG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH----EAPLSCIALNQTGTRLAT 286 (424)
Q Consensus 218 ~~~~~~~-~---~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~ 286 (424)
++.+..+ . .+ +..++++ ++. ++++++.|+.|++||+++++. ...+..+ ...+.++.|+ +++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 314 (615)
T 1pgu_A 239 GEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKC-VQKWTLDKQQLGNQQVGVVAT-GNGRIIS 314 (615)
T ss_dssp CCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEE-EEEEECCTTCGGGCEEEEEEE-ETTEEEE
T ss_pred CCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcE-EEEEcCCCCcccCceeEEEeC-CCCeEEE
Confidence 9988888 3 22 6778888 555 455599999999999997653 3344444 4678888886 8899999
Q ss_pred EeCCCcEEEEEECCCCceeeeecc--------------------------------------------CCcEEEEEeCCC
Q psy3710 287 ASYKGTLIRVFDTGSGQKLNELRR--------------------------------------------DSSYLCVSSDHG 322 (424)
Q Consensus 287 ~~~d~~~i~iwd~~~~~~~~~~~~--------------------------------------------~~~~l~~~~~d~ 322 (424)
++.|+. |++||+.+++.+..+.. ++..+++++.|+
T Consensus 315 ~~~~g~-i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~ 393 (615)
T 1pgu_A 315 LSLDGT-LNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDD 393 (615)
T ss_dssp EETTSC-EEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTT
T ss_pred EECCCC-EEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCC
Confidence 999999 99999998777655432 266777788888
Q ss_pred cEEEEEcccccccc----------------------------------cc---ccceeeeccCc-----cc-cC---Cce
Q psy3710 323 TVHVFSVDEAQKIN----------------------------------KQ---SSLASASFLPK-----YF-SS---SWS 356 (424)
Q Consensus 323 ~i~iw~~~~~~~~~----------------------------------~~---~~~~~~~~~~~-----~~-~~---~~~ 356 (424)
.+++|++.+++... .. .......+... .. ++ .|+
T Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~ 473 (615)
T 1pgu_A 394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFK 473 (615)
T ss_dssp EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEE
T ss_pred CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEE
Confidence 88888876543210 00 00000000000 00 11 122
Q ss_pred e-------eEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeeee------ehhhheecC----------C
Q psy3710 357 F-------CKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDV------YIQFLEMTN----------D 413 (424)
Q Consensus 357 ~-------~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~------~~~~~~~~~----------d 413 (424)
. ..+..|...+..++|+|++++|++++.||.|++|++. .++++... ....+.++| +
T Consensus 474 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~ 552 (615)
T 1pgu_A 474 LSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ-SREVKTSRWAFRTSKINAISWKPAEKGANEEEIE 552 (615)
T ss_dssp TTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEECCSCCCSSCEEEEEECCCC------CCS
T ss_pred CCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCC-CCcceeEeecCCCCceeEEEEcCccccccccccC
Confidence 2 2234467889999999999999999999999999997 55554432 245678999 9
Q ss_pred CceeeEEE
Q psy3710 414 SNLLSCIE 421 (424)
Q Consensus 414 ~~~l~~~~ 421 (424)
+++|+++.
T Consensus 553 ~~~l~~~~ 560 (615)
T 1pgu_A 553 EDLVATGS 560 (615)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEc
Confidence 99999884
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-43 Score=305.04 Aligned_cols=282 Identities=15% Similarity=0.182 Sum_probs=241.4
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
++.+|.+.|++++|+|+|++|++|+.++ |++||+++++.......|...+..+.|+++++++++++ .|++|+
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-------~d~~i~ 80 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-------DDFRIR 80 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-------TTSEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC-------CCCEEE
Confidence 3889999999999999999999999888 99999999888777778899999999999999999988 689999
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecC-CCCeEEE
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNS-NNSLLAF 158 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 158 (424)
+||+.+++.+..+. |...|.+++|+|++.++++ |+.|++||++........+..|... +.+++|+| ++..+++
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF--VMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC--EEEEEECTTCTTEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc--EEEEEECCCCCCEEEE
Confidence 99999999999988 8999999999999987776 8999999997444566677777644 88999999 5677777
Q ss_pred eeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc--CCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeee
Q psy3710 159 PGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ--TGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCP 233 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~ 233 (424)
|+.|+.|++||+............|...+..+.|+| ++.+|++++.|+. |++||+++++++..+..+ +..+++
T Consensus 159 -gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 159 -GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp -EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred -EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCCCCCCEEEEEE
Confidence 999999999999876333333346678899999987 6789999999999 999999999999998866 677889
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEEECCC
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT--RLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~~i~iwd~~~ 301 (424)
+|++..+ ++|+.||.|++||+.+.+ ....+..|...+.+++|+|++. ++++|+.|| +.+|++..
T Consensus 237 ~p~~~~l-~s~s~Dg~i~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g--~~~~~~~~ 302 (304)
T 2ynn_A 237 HPTLPII-ISGSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGFDNG--FTVLSLGN 302 (304)
T ss_dssp CSSSSEE-EEEETTSCEEEEETTTCC-EEEEECCSSSSEEEEEECTTCGGGCEEEEETTE--EEEEECC-
T ss_pred CCCCCEE-EEEcCCCeEEEEECCCCc-eeeeccCCCccEEEEEECCCCCceEEEEecCCc--eEEEEecc
Confidence 9988755 469999999999999866 4566778999999999999875 577777766 78888765
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-43 Score=314.28 Aligned_cols=278 Identities=14% Similarity=0.174 Sum_probs=240.0
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
.+.+|.+.|++++|+|++++||+|+.|+ |++||..+++.......|...+..++|+|++..+++++ .|+.++
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~-------~d~~i~ 131 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG-------LDNKCS 131 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES-------TTSEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee-------CCCCEE
Confidence 4789999999999999999999999999 99999988887666777888999999999999998888 689999
Q ss_pred EEECCCC------cEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeec--C
Q psy3710 84 IWDDLKK------QVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPN--S 151 (424)
Q Consensus 84 iwd~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 151 (424)
+|++... .....+. |...|.+++|+|++..+++ |+.|++||+. .++.+..+..|... +.++.++ +
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~-~~~~~~~~~~h~~~--v~~~~~~~~~ 208 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE-SGQLLQSFHGHGAD--VLCLDLAPSE 208 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TCCEEEEEECCSSC--EEEEEECCCS
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEcCCCCC--eEEEEEEeCC
Confidence 9998643 2233444 8899999999999866654 8999999997 78888889888765 5555554 4
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec-----
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR----- 226 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~----- 226 (424)
++.++++ |+.||.|++||++++ +.+..+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+..
T Consensus 209 ~g~~l~s-gs~Dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 209 TGNTFVS-GGCDKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp SCCEEEE-EETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCS
T ss_pred CCCEEEE-EeCCCeEEEEECCCC-cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCccc
Confidence 6788887 999999999999986 677788899999999999999999999999999 99999999887766653
Q ss_pred ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEE
Q psy3710 227 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298 (424)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 298 (424)
.+..++++|++..++. |+.|+.|++||+.++. ....+.+|...|++++|+|+|++|++++.|+. |++|+
T Consensus 286 ~~~~~~~s~~g~~l~~-g~~d~~i~vwd~~~~~-~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~-v~vW~ 354 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFA-GYNDYTINVWDVLKGS-RVSILFGHENRVSTLRVSPDGTAFCSGSWDHT-LRVWA 354 (354)
T ss_dssp CEEEEEECTTSSEEEE-EETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTTSSCEEEEETTSE-EEEEC
T ss_pred ceeEEEEeCCCCEEEE-EECCCcEEEEECCCCc-eEEEEECCCCcEEEEEECCCCCEEEEEcCCCC-EEecC
Confidence 3567889998887665 9999999999998766 35567799999999999999999999999999 99996
No 16
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-43 Score=343.97 Aligned_cols=353 Identities=11% Similarity=0.081 Sum_probs=258.9
Q ss_pred cccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw 85 (424)
..|...|.+++|+| |++|++++.++ |++||+++++.+.... +.+.|.+++|+|+++++++.+ .|++|++|
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs-------~dg~V~lw 125 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGL-------QNGSMIVY 125 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEE-------TTSCEEEE
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEc-------CCCcEEEE
Confidence 35888999999999 88999998888 9999999887765554 567899999999999999888 58999999
Q ss_pred ECCCCcEEE-E----------Ee-ecCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEEeeCC----------
Q psy3710 86 DDLKKQVVI-C----------LE-FNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFETNP---------- 139 (424)
Q Consensus 86 d~~~~~~~~-~----------~~-~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~~~~---------- 139 (424)
|+++++... . +. |.++|.+++|+|++ ..+++ |+.| +||++ ..+.+..+..+.
T Consensus 126 d~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~-~~~~~~~~~~~~~~g~~~~~~~ 203 (902)
T 2oaj_A 126 DIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLV-ENEIKQSFIYELPPFAPGGDFS 203 (902)
T ss_dssp ETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETT-TTEEEEEECCCBCTTCCCSTTC
T ss_pred ECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECC-CCceEEEEecccCCcCCCcccc
Confidence 999887641 1 12 67899999999974 33433 8999 99997 677777776551
Q ss_pred ------CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc--cc---cc-------------ccCCeEEEEEc-
Q psy3710 140 ------NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL--DI---AA-------------HEAPLSCIALN- 194 (424)
Q Consensus 140 ------~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~--~~---~~-------------~~~~v~~~~~~- 194 (424)
+...+.+++|+|++++|++ |+.||.|++||++++ +.+. .+ .. |...|.+++|+
T Consensus 204 ~~~~~~h~~~V~~v~fspdg~~las-gs~Dg~i~lWd~~~g-~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 204 EKTNEKRTPKVIQSLYHPNSLHIIT-IHEDNSLVFWDANSG-HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp CCTTSCBCCCEEEEEECTTSSEEEE-EETTCCEEEEETTTC-CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred cccccccCCCeEEEEEcCCCCEEEE-EECCCeEEEEECCCC-cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 1144889999999999998 999999999999876 3322 11 11 34578999995
Q ss_pred ---cCC-CEEEEEecC-----CcEEEEEE---------------------------------------------------
Q psy3710 195 ---QTG-TRLATASYK-----GTLIRVFD--------------------------------------------------- 214 (424)
Q Consensus 195 ---~~~-~~l~~~~~d-----~~~i~iwd--------------------------------------------------- 214 (424)
|++ ..+++++.+ .. +.+|+
T Consensus 282 ~~~pd~~~ll~sg~~~~~~~~~~-v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g 360 (902)
T 2oaj_A 282 ENNPEYTSLLISHKSISRGDNQS-LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAG 360 (902)
T ss_dssp CSSTTEEEEEEEEECSTTSSCCC-EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHH
T ss_pred cCCCCCCEEEEeCCCCCCCCCce-EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCC
Confidence 332 345555443 13 55554
Q ss_pred --------------------CCCcceeeE-------------------E----------------------ecc---eee
Q psy3710 215 --------------------TGSGQKLNE-------------------L----------------------RRG---LCV 230 (424)
Q Consensus 215 --------------------~~~~~~~~~-------------------~----------------------~~~---~~~ 230 (424)
+.++..... + .++ +..
T Consensus 361 ~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~s 440 (902)
T 2oaj_A 361 CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQ 440 (902)
T ss_dssp TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCC
T ss_pred CCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCc
Confidence 332211110 0 000 011
Q ss_pred eeecCCCCeEEEEeecCCeEEEEeCCCCCCCC-eee---------ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPP-LDI---------AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~---------~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
++++|++ .++++|+.|++|++||+.++.... ..+ .+|...|.+++|+||+++||+|+.|++ |+|||+.
T Consensus 441 v~~spdg-~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~ 518 (902)
T 2oaj_A 441 KLPAEYG-TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYE 518 (902)
T ss_dssp CCCCSEE-EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEE
T ss_pred ccccccC-cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEec
Confidence 2334544 456679999999999998874211 111 178999999999999999999999999 9999997
Q ss_pred CCc---------------------------------------------eee------------eeccCCcEEEEEeCCCc
Q psy3710 301 SGQ---------------------------------------------KLN------------ELRRDSSYLCVSSDHGT 323 (424)
Q Consensus 301 ~~~---------------------------------------------~~~------------~~~~~~~~l~~~~~d~~ 323 (424)
+++ ++. .|+|+| +||+|+.|++
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 519 VNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp ECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred CccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 652 122 267899 9999999999
Q ss_pred EEEEEccccccccccccceeeeccCccccCCceeeEE-eecCCCceEEEEe-----cCC---CeEEEEeccCcEEEEEe
Q psy3710 324 VHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKF-QIPSDPPCICAFG-----ADS---NSIIVICADGSYYKFMF 393 (424)
Q Consensus 324 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s-----~~~---~~l~~~~~dg~v~~~~~ 393 (424)
|++||++++..+.+... ..+ ..|.+.|++++|+ ||| ++|++|+.||+|++|++
T Consensus 598 v~lwd~~~~~~~~~~~~-----------------~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 598 LMLIDRRGPAIIYMENI-----------------REISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEETTTTEEEEEEEG-----------------GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEEECCCCeEEEEeeh-----------------hHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 99999987554321000 001 2466789999999 885 89999999999999999
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-42 Score=300.84 Aligned_cols=281 Identities=16% Similarity=0.212 Sum_probs=244.9
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
++.+|.+.|++++|+|+|++|++|+.++ |++|+..+++.......|...|..++|+|+++++++++ .|+.|+
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~d~~i~ 90 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS-------DDKTLK 90 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-------CCCEEE
Confidence 4789999999999999999999999888 99999988887777777899999999999999999988 689999
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
+||+++++.+..+. |...|.+++|+|++.++++ |+.|++||++ .++.+..+..|..+ +.+++++|+++++++
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~- 166 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK-TGKCLKTLPAHSDP--VSAVHFNRDGSLIVS- 166 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCCEEEEECCCSSC--EEEEEECTTSSEEEE-
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCEEEEEecCCCCc--EEEEEEcCCCCEEEE-
Confidence 99999999999888 8899999999999977775 8999999997 77777888777644 888999999999998
Q ss_pred eccCCeEEEEeCCCCCCCCcc-cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecce-----eeeee
Q psy3710 160 GRKSGHVHLVDLADPERPPLD-IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGL-----CVLCP 233 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~-----~~~~~ 233 (424)
|+.||.|++||++++ +.... ...+..++..++|+|++++|++++.|+. |++||+++++.+..+..+. ....+
T Consensus 167 ~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 167 SSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp EETTSCEEEEETTTC-CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred EeCCCcEEEEECCCC-ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 999999999999986 43333 3456778999999999999999999999 9999999999888887552 22345
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEECC
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS--YKGTLIRVFDTG 300 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~~i~iwd~~ 300 (424)
.+.+..++++|+.||.|++||+.+++ ....+.+|...|.+++|+|+++++++++ .|+. |++|+.+
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~-i~~W~~d 311 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKE-IVQKLQGHTDVVISTACHPTENIIASAALENDKT-IKLWKSD 311 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCC-EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCC-EEEEECC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCch-hhhhhhccCCcEEEEeecCcCCceEEEEccCCcc-EEEecCC
Confidence 55566677779999999999998865 4567789999999999999999999997 6899 9999864
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8e-43 Score=306.87 Aligned_cols=282 Identities=13% Similarity=0.110 Sum_probs=225.5
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCeEEEEeCCcC-------cc----cccccccCCCeeeEEEeccCceEEEEeCCcC
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPL-------KE----KERQDFTDGGLGHVEMLFRCNYLALVGGGTH 74 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~-------~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 74 (424)
...|...|.+++|+|||++|++++++.+++||.... .. ......+...|.+++|++++ .+++++
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s---- 100 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVAS---- 100 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEE----
T ss_pred cccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEE----
Confidence 456888899999999999999998766888873211 00 11111246779999999985 566666
Q ss_pred CCcCCCeEEEEECCCCcEEEEE-----eecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEE
Q psy3710 75 PKYPNNRVMIWDDLKKQVVICL-----EFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCV 146 (424)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 146 (424)
.|++|+|||+++++.+... .|.+.|.+++|+|++.++++ |+.|++||+. +++.+..+.+|... +.+
T Consensus 101 ---~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-~~~~~~~~~~h~~~--V~~ 174 (344)
T 4gqb_B 101 ---DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-QQVVLSSYRAHAAQ--VTC 174 (344)
T ss_dssp ---TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSC--EEE
T ss_pred ---CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCcCCc--eEE
Confidence 5899999999988754433 27889999999999988876 8999999997 78888889888754 888
Q ss_pred EeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccc--ccccCCeEEEEEccC-CCEEEEEecCCcEEEEEECCCcceeeE
Q psy3710 147 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI--AAHEAPLSCIALNQT-GTRLATASYKGTLIRVFDTGSGQKLNE 223 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~l~~~~~d~~~i~iwd~~~~~~~~~ 223 (424)
++|++++..++++|+.|+.|++||++++ +....+ ..|...+.+++|+|+ +++|++|+.|+. |++||+++++++..
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCP-KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLS 252 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSS-SCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEE
T ss_pred EEecCCCCCceeeecccccccccccccc-ceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEE
Confidence 9999998654444999999999999986 555444 355667999999995 568899999999 99999999999998
Q ss_pred Eecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEEC
Q psy3710 224 LRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDT 299 (424)
Q Consensus 224 ~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~ 299 (424)
+..+ +..++|+|++..++++|+.|++|++||+.+++ ...+.+|.+.|++++|+|+++ +|++++.|++ |++|++
T Consensus 253 ~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~--~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~-v~~w~v 329 (344)
T 4gqb_B 253 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE--LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ-VVHHVV 329 (344)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE--EEEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEEC
T ss_pred EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc--EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe-EEEEEC
Confidence 8865 77899999998888889999999999998865 345679999999999999886 5678999999 999999
Q ss_pred CCCc
Q psy3710 300 GSGQ 303 (424)
Q Consensus 300 ~~~~ 303 (424)
.+..
T Consensus 330 ~~~~ 333 (344)
T 4gqb_B 330 PTEP 333 (344)
T ss_dssp CC--
T ss_pred CCCC
Confidence 7654
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.9e-43 Score=310.27 Aligned_cols=282 Identities=13% Similarity=0.183 Sum_probs=222.7
Q ss_pred ccccCCceEEEEECCCCCeeEeecC------Ce-EEEEeCCcCccccc----ccccCCCeeeEEEeccCceEEEEeCCcC
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGME------DG-FRIYNCDPLKEKER----QDFTDGGLGHVEMLFRCNYLALVGGGTH 74 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~------~~-i~iw~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~~~~ 74 (424)
...|+..|++++|||||++||+|+. ++ |++|+..++..... ...|...|.+++|+|++..+ +++
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s---- 112 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VAS---- 112 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEE----
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEE----
Confidence 4579999999999999999999987 56 89998876654222 23477889999999998655 445
Q ss_pred CCcCCCeEEEEECCCCcEEEEE-----eecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEE
Q psy3710 75 PKYPNNRVMIWDDLKKQVVICL-----EFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCV 146 (424)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 146 (424)
.|++|++||+.+++..... .|...|.+++|+|++.++++ |+.|++||+. +++.+..+..|... +.+
T Consensus 113 ---~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~-~~~~~~~~~~h~~~--v~~ 186 (357)
T 4g56_B 113 ---DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS-QKAVLKSYNAHSSE--VNC 186 (357)
T ss_dssp ---TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TTEEEEEECCCSSC--EEE
T ss_pred ---CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEEcCCCCC--EEE
Confidence 4899999999888765322 36889999999999987775 8999999997 78888888887754 888
Q ss_pred EeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc--ccccccCCeEEEEEccC-CCEEEEEecCCcEEEEEECCCcceeeE
Q psy3710 147 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL--DIAAHEAPLSCIALNQT-GTRLATASYKGTLIRVFDTGSGQKLNE 223 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~~i~iwd~~~~~~~~~ 223 (424)
+++++++..++++++.||.|++||++++ ++.. ....|...+.+++|+|+ +.+|++++.|+. |++||+++++.+..
T Consensus 187 v~~s~~~~~~~~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~ 264 (357)
T 4g56_B 187 VAACPGKDTIFLSCGEDGRILLWDTRKP-KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQT 264 (357)
T ss_dssp EEECTTCSSCEEEEETTSCEEECCTTSS-SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEE
T ss_pred EEEccCCCceeeeeccCCceEEEECCCC-ceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEE
Confidence 9999988644434999999999999986 4433 34467788999999997 467889999999 99999999998888
Q ss_pred Eecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEEC
Q psy3710 224 LRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDT 299 (424)
Q Consensus 224 ~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~ 299 (424)
+..+ +..++++|++..++++|+.|++|++||+++++. ....+|.+.|++++|+| ++++|++++.|++ |++|++
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~--~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~-v~iW~~ 341 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV--FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK-VLHHHL 341 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE--EEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEEC
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE--eEECCCCCCEEEEEEeCCCCCEEEEEcCCCe-EEEEEC
Confidence 8754 788999999988888899999999999988653 23348999999999998 7999999999999 999999
Q ss_pred CCCc
Q psy3710 300 GSGQ 303 (424)
Q Consensus 300 ~~~~ 303 (424)
.+..
T Consensus 342 ~~~~ 345 (357)
T 4g56_B 342 PSEG 345 (357)
T ss_dssp C---
T ss_pred CCCC
Confidence 7643
No 20
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-43 Score=317.73 Aligned_cols=339 Identities=15% Similarity=0.195 Sum_probs=264.7
Q ss_pred cccCCceEEEEECCCCC-eeEeecCCe-EEEEeC----CcCc------ccccccc----------cCCCeeeEEEeccCc
Q psy3710 7 STYKNGLLYAGFNQDQG-CFACGMEDG-FRIYNC----DPLK------EKERQDF----------TDGGLGHVEMLFRCN 64 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~-~la~g~~~~-i~iw~~----~~~~------~~~~~~~----------~~~~i~~~~~~~~~~ 64 (424)
..|.+.|++++|+|+|+ +||+|+.++ |++|++ .+++ ....... |.+.|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34669999999999999 999999888 999999 7776 2222222 567999999999999
Q ss_pred eEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCC
Q psy3710 65 YLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPN 140 (424)
Q Consensus 65 ~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~ 140 (424)
++++++ .|+.|++|| .+++.+..+. |...|.+++|+|++..+++ ++.|++||+. .++.+..+..+..
T Consensus 122 ~l~~~~-------~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 122 SIVTGV-------ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI-SGTVMQHFELKET 192 (425)
T ss_dssp EEEEEE-------TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT-TTEEEEEECCC--
T ss_pred EEEEEe-------CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC-CCcEEEEeecccc
Confidence 999988 589999999 6788888887 8999999999999976665 8999999996 6777777766553
Q ss_pred CCe-------------eEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCC
Q psy3710 141 PKG-------------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 207 (424)
Q Consensus 141 ~~~-------------~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 207 (424)
... +.++.+++++. +++ ++.+|.|++||+.++ .....+..|...|.+++|+|++++|++++.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~i~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDK-FVI-PGPKGAIFVYQITEK-TPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp -------------CCCBSCCEEEETTE-EEE-ECGGGCEEEEETTCS-SCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccceeeccccCCcceeeEEEEcCCCE-EEE-EcCCCeEEEEEcCCC-ceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 311 55677777754 555 899999999999986 77778889999999999999999999999999
Q ss_pred cEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEE
Q psy3710 208 TLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL 284 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 284 (424)
. |++||+++++.+..+..+ +..++++|++ ++++++.|+.|++||+++++ ....+..|...|.+++|+|++++|
T Consensus 270 ~-i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 270 T-LRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNT-LLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp C-EEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTE-EEEEEECTTCCEEEEEECTTSSEE
T ss_pred E-EEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCc-EeEecccCCccEEEEEEcCCCCEE
Confidence 9 999999999888887643 7788999988 66679999999999998865 455667899999999999999999
Q ss_pred EEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecC
Q psy3710 285 ATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPS 364 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (424)
++++.|+. |++||+++++..... ..+..++.+. ....+ .+..+..|.
T Consensus 346 ~~~~~dg~-i~i~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~----------------------~~~~~~~~~ 392 (425)
T 1r5m_A 346 AVAFMDGQ-VNVYDLKKLNSKSRS-------LYGNRDGILN---PLPIP----------------------LYASYQSSQ 392 (425)
T ss_dssp EEEETTSC-EEEEECHHHHC------------------------CEECC----------------------EEEEECCTT
T ss_pred EEEECCCe-EEEEECCCCccceee-------eecccccccC---cccch----------------------hhhhhcCcc
Confidence 99999999 999999876532211 1122222211 11100 122344554
Q ss_pred C--CceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 365 D--PPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 365 ~--~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
. .+..++|+|++++|++++.||.|++|+++
T Consensus 393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 4 89999999999999999999999999985
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.2e-43 Score=317.83 Aligned_cols=288 Identities=18% Similarity=0.247 Sum_probs=240.5
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
++.+|.+.|++++|+|++++|++|+.|+ |+|||+.+++.......|...|..++|+|+++++++++ .|+.++
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~-------~d~~v~ 133 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG-------LDSACS 133 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC-------SSSCCE
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee-------CCCcEE
Confidence 4889999999999999999999999999 99999999888777778899999999999999998887 689999
Q ss_pred EEECCCCc-------EEEEEe-ecCCeEEEEecCCc-e-EEEe--eccEEEEeecCCCceeEEEee---CCCCCeeEEEe
Q psy3710 84 IWDDLKKQ-------VVICLE-FNAPVKGVRLRRDK-I-VVVL--EGLIKVYTFIQCPQQLHVFET---NPNPKGLCVLC 148 (424)
Q Consensus 84 iwd~~~~~-------~~~~~~-~~~~v~~~~~~~~~-~-~~~~--~~~i~v~~~~~~~~~~~~~~~---~~~~~~~~~~~ 148 (424)
+||+.+.. ....+. |.+.+.++.|.|+. . ++.. |+.|++||+. +++.+..+.. ..+...+.+++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~-~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVT-TGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTT-TCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcC-CCcEEEEeecccCCCCccCeEEEE
Confidence 99986532 223333 78889999999864 2 3333 9999999997 6666666522 12234588888
Q ss_pred ecC-CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc
Q psy3710 149 PNS-NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG 227 (424)
Q Consensus 149 ~~~-~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~ 227 (424)
+++ ++.++++ |+.|+.|++||++.....+..+.+|.+.|.+++|+|++++|++++.|+. |++||+++++.+..+..+
T Consensus 213 ~~~~~~~~l~s-gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 213 INSLNANMFIS-GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp ECSSSCCEEEE-EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEECCC
T ss_pred eecCCCCEEEE-EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEeccc
Confidence 876 6777777 9999999999998655778889999999999999999999999999999 999999999888777542
Q ss_pred ----------eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCe---eeccCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy3710 228 ----------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL---DIAAHEAPLSCIALNQTGTRLATASYKGTLI 294 (424)
Q Consensus 228 ----------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i 294 (424)
+..++++|++..++. |+.||.|++||+..++.... ...+|.+.|++++|+|+|++|++|+.|++ |
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~~l~~-g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~-i 368 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGRLLFA-GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN-L 368 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSSEEEE-ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC-E
T ss_pred ccccccccCceEEEEECCCCCEEEE-EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC-E
Confidence 567899999887776 89999999999987663221 12579999999999999999999999999 9
Q ss_pred EEEECCCCce
Q psy3710 295 RVFDTGSGQK 304 (424)
Q Consensus 295 ~iwd~~~~~~ 304 (424)
++|++...+.
T Consensus 369 ~iW~~~~~~~ 378 (380)
T 3iz6_a 369 KIWAFSGHRK 378 (380)
T ss_dssp EEEECCSSSS
T ss_pred EEEecCCCcc
Confidence 9999987643
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-42 Score=314.44 Aligned_cols=270 Identities=14% Similarity=0.204 Sum_probs=235.3
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEE
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKV 122 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v 122 (424)
...|.++|.+++|+|+++.+++++ .|++|++||+.+++....+. |...|.+++|+|++.++++ |+.|++
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s-------~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSAS-------EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKL 176 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEE-------SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred ecccCCcEEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 456889999999999999999988 68999999999999999888 8999999999999987775 899999
Q ss_pred EeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEE
Q psy3710 123 YTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 202 (424)
||+. ..+.+..+..|... +.+++|+|++.++++ |+.|+.|++||++++ ..+..+.+|...|.+++|+|++.+|++
T Consensus 177 wd~~-~~~~~~~~~~h~~~--V~~v~~~p~~~~l~s-~s~D~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 177 WDFQ-GFECIRTMHGHDHN--VSSVSIMPNGDHIVS-ASRDKTIKMWEVQTG-YCVKTFTGHREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp EETT-SSCEEECCCCCSSC--EEEEEECSSSSEEEE-EETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EeCC-CCceeEEEcCCCCC--EEEEEEeCCCCEEEE-EeCCCeEEEEECCCC-cEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 9996 77777878777644 889999999999998 999999999999987 677888999999999999999999999
Q ss_pred EecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCC--
Q psy3710 203 ASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT-- 280 (424)
Q Consensus 203 ~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~-- 280 (424)
++.|+. |++||++++++...+. +|...|.+++|+|+
T Consensus 252 ~s~D~~-v~vwd~~~~~~~~~~~-----------------------------------------~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 252 CSNDQT-VRVWVVATKECKAELR-----------------------------------------EHRHVVECISWAPESS 289 (410)
T ss_dssp EETTSC-EEEEETTTCCEEEEEC-----------------------------------------CCSSCEEEEEECCSCG
T ss_pred EcCCCe-EEEEECCCCceeeEec-----------------------------------------CCCceEEEEEEcCccc
Confidence 999999 9999999887766554 34445555555553
Q ss_pred ------------------CCEEEEEeCCCcEEEEEECCCCceeee------------eccCCcEEEEEeCCCcEEEEEcc
Q psy3710 281 ------------------GTRLATASYKGTLIRVFDTGSGQKLNE------------LRRDSSYLCVSSDHGTVHVFSVD 330 (424)
Q Consensus 281 ------------------~~~l~~~~~d~~~i~iwd~~~~~~~~~------------~~~~~~~l~~~~~d~~i~iw~~~ 330 (424)
+.+|++|+.|+. |++||+++++++.. |+|++++|++++.|+.|++||+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 779999999999 99999999887764 46789999999999999999998
Q ss_pred ccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEe
Q psy3710 331 EAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMF 393 (424)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~ 393 (424)
+++++.. +..|.+.|+.++|+|++++|++|+.||+|++|++
T Consensus 369 ~~~~~~~----------------------~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 369 NKRCMKT----------------------LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TSCCCEE----------------------EECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCceEEE----------------------EcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 8665432 4557788999999999999999999999999986
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.9e-42 Score=303.42 Aligned_cols=270 Identities=13% Similarity=0.151 Sum_probs=229.5
Q ss_pred cccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEE
Q psy3710 46 RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIK 121 (424)
Q Consensus 46 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~ 121 (424)
....|.+.|.+++|+|+++++++++ .|++|++||..+++.+..+. |...|.+++|+|++.++++ |+.++
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s-------~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSAS-------QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEE-------TTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEe-------CCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 3556899999999999999999998 68999999999999998888 7889999999999988876 89999
Q ss_pred EEeecCCC---ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC
Q psy3710 122 VYTFIQCP---QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT 198 (424)
Q Consensus 122 v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 198 (424)
+|++.... .....+..|... +.++.|++++. +++ ++.|+.|++||++++ .....+.+|.+.|.+++|+|+++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~-l~s-~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGY--LSCCRFLDDNQ-IVT-SSGDTTCALWDIETG-QQTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSC--EEEEEEEETTE-EEE-EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSS
T ss_pred EEECccCCCcceeEEEecCCCcc--EEEEEECCCCc-EEE-EECCCcEEEEECCCC-cEEEEEcCCCCceEEEEECCCCC
Confidence 99986322 344556666644 77788887775 666 899999999999986 67778889999999999999999
Q ss_pred EEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEc
Q psy3710 199 RLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALN 278 (424)
Q Consensus 199 ~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 278 (424)
++++++.|+. |++||++++++...+. +|...|++++|+
T Consensus 198 ~l~sg~~d~~-v~~wd~~~~~~~~~~~-----------------------------------------~h~~~v~~v~~~ 235 (340)
T 1got_B 198 LFVSGACDAS-AKLWDVREGMCRQTFT-----------------------------------------GHESDINAICFF 235 (340)
T ss_dssp EEEEEETTSC-EEEEETTTCSEEEEEC-----------------------------------------CCSSCEEEEEEC
T ss_pred EEEEEeCCCc-EEEEECCCCeeEEEEc-----------------------------------------CCcCCEEEEEEc
Confidence 9999999999 9999998877654443 678889999999
Q ss_pred CCCCEEEEEeCCCcEEEEEECCCCceee--------------eeccCCcEEEEEeCCCcEEEEEccccccccccccceee
Q psy3710 279 QTGTRLATASYKGTLIRVFDTGSGQKLN--------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASA 344 (424)
Q Consensus 279 ~~~~~l~~~~~d~~~i~iwd~~~~~~~~--------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 344 (424)
|++++|++++.|+. |++||+++++.+. .|+|++++|++|+.|+.|++||+.+++.+.
T Consensus 236 p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~-------- 306 (340)
T 1got_B 236 PNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG-------- 306 (340)
T ss_dssp TTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------
T ss_pred CCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee--------
Confidence 99999999999999 9999998776543 256889999999999999999988765432
Q ss_pred eccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEE
Q psy3710 345 SFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFM 392 (424)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~ 392 (424)
.+..|.++|..++|+|++++|++|+.||.|++|+
T Consensus 307 --------------~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 307 --------------VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp --------------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --------------EeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 2456778899999999999999999999999996
No 24
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=301.85 Aligned_cols=271 Identities=18% Similarity=0.289 Sum_probs=223.2
Q ss_pred ccccCCCeeeEEEecc----CceEEEEeCCcCCCcCCCeEEEEECCCCcEEE--EEe-ecCCeEEEEecCCceEEEe---
Q psy3710 47 QDFTDGGLGHVEMLFR----CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVI--CLE-FNAPVKGVRLRRDKIVVVL--- 116 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~----~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~--~~~-~~~~v~~~~~~~~~~~~~~--- 116 (424)
...|.+.|.+++|+++ ++.+++++ .|++|++|++.+++... .+. |...|.++++++++.++++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs-------~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGS-------LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL 100 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEE-------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEc-------CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC
Confidence 3458999999999885 45787777 68999999998776543 444 7889999999999987776
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccC
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 196 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 196 (424)
|+.|++||+. +++.+..+..+.. .+.+++|+|++++|++ |+.+|.|++|+++++ .....+..|...|.+++|+|+
T Consensus 101 D~~i~lWd~~-~~~~~~~~~~~~~--~~~~~~~spdg~~l~~-g~~dg~v~i~~~~~~-~~~~~~~~~~~~v~~~~~spd 175 (321)
T 3ow8_A 101 DAHIRLWDLE-NGKQIKSIDAGPV--DAWTLAFSPDSQYLAT-GTHVGKVNIFGVESG-KKEYSLDTRGKFILSIAYSPD 175 (321)
T ss_dssp TSEEEEEETT-TTEEEEEEECCTT--CCCCEEECTTSSEEEE-ECTTSEEEEEETTTC-SEEEEEECSSSCEEEEEECTT
T ss_pred CCcEEEEECC-CCCEEEEEeCCCc--cEEEEEECCCCCEEEE-EcCCCcEEEEEcCCC-ceeEEecCCCceEEEEEECCC
Confidence 8999999996 7778888876654 4667899999999998 999999999999986 666778889999999999999
Q ss_pred CCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEE
Q psy3710 197 GTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIA 276 (424)
Q Consensus 197 ~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 276 (424)
+++|++++.|+. |++||+++++.+..+. +|..+|.+++
T Consensus 176 g~~lasg~~dg~-i~iwd~~~~~~~~~~~-----------------------------------------~h~~~v~~l~ 213 (321)
T 3ow8_A 176 GKYLASGAIDGI-INIFDIATGKLLHTLE-----------------------------------------GHAMPIRSLT 213 (321)
T ss_dssp SSEEEEEETTSC-EEEEETTTTEEEEEEC-----------------------------------------CCSSCCCEEE
T ss_pred CCEEEEEcCCCe-EEEEECCCCcEEEEEc-----------------------------------------ccCCceeEEE
Confidence 999999999999 9999999887665543 5777788888
Q ss_pred EcCCCCEEEEEeCCCcEEEEEECCCCceeee------------eccCCcEEEEEeCCCcEEEEEccccccccccccceee
Q psy3710 277 LNQTGTRLATASYKGTLIRVFDTGSGQKLNE------------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASA 344 (424)
Q Consensus 277 ~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~------------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~ 344 (424)
|+|++++|++++.|+. |++||+++++.+.. |+|++++|++++.|++|++||+.+++++..
T Consensus 214 ~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~------- 285 (321)
T 3ow8_A 214 FSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT------- 285 (321)
T ss_dssp ECTTSCEEEEECTTSC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-------
T ss_pred EcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE-------
Confidence 8888888888888888 88888887765543 457888888888888888888887665432
Q ss_pred eccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 345 SFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+..|.+.+..++|+|++++|++++.||.|++|+++
T Consensus 286 ---------------~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 286 ---------------FFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ---------------ECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ---------------EcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 33456778899999999999999999999999974
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.5e-43 Score=313.12 Aligned_cols=292 Identities=18% Similarity=0.215 Sum_probs=246.8
Q ss_pred CeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCe
Q psy3710 80 NRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSL 155 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (424)
..+..|+..+..+.+.+. |.+.|.+++|+|++.++++ |+.|++||+. +++....+..|... +.+++|+|++++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~-~~~~~~~~~~h~~~--v~~~~~s~~g~~ 122 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL-TSQKTHAIKLHCPW--VMECAFAPNGQS 122 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT-TTEEEEEEECCCTT--CCCCEECTTSSE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCccceEEecCCCC--EEEEEECCCCCE
Confidence 445567777777888887 8999999999999977776 8999999996 77888888887755 677889999999
Q ss_pred EEEeeccCCeEEEEeCCCCC------CCCcccccccCCeEEEEEccCC-CEEEEEecCCcEEEEEECCCcceeeEEe---
Q psy3710 156 LAFPGRKSGHVHLVDLADPE------RPPLDIAAHEAPLSCIALNQTG-TRLATASYKGTLIRVFDTGSGQKLNELR--- 225 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~~i~iwd~~~~~~~~~~~--- 225 (424)
+++ |+.|+.+++||+.... .....+.+|.+.|.++.|+|++ ..|++++.|+. |++||+++++.+..+.
T Consensus 123 las-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~-i~~wd~~~~~~~~~~~~~~ 200 (380)
T 3iz6_a 123 VAC-GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQT-CVLWDVTTGQRISIFGSEF 200 (380)
T ss_dssp EEE-CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSC-EEEECTTTCCEEEEECCCS
T ss_pred EEE-eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCc-EEEEEcCCCcEEEEeeccc
Confidence 998 9999999999997531 2344678999999999999974 57999999999 9999999999887763
Q ss_pred --c---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 226 --R---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 226 --~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
. .+..+++++.+..++++|+.|+.|++||++........+.+|...|++++|+|++++|++++.|++ |++||++
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~ 279 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMR 279 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETT
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECC
Confidence 2 256778888777788889999999999999766677888899999999999999999999999999 9999999
Q ss_pred CCceeee-------------------eccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEe
Q psy3710 301 SGQKLNE-------------------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQ 361 (424)
Q Consensus 301 ~~~~~~~-------------------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (424)
+++.+.. |+|+|++|++|+.||.|++||+..++.+...... ..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~------------------~~ 341 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL------------------QN 341 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS------------------CS
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc------------------cC
Confidence 9876543 5689999999999999999999887654332110 12
Q ss_pred ecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 362 IPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 362 ~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
.|.+.|..++|+|||++|++|+.||+|++|++..
T Consensus 342 ~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 4667899999999999999999999999999974
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=303.38 Aligned_cols=293 Identities=17% Similarity=0.188 Sum_probs=232.4
Q ss_pred cccccccCC-ceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccc---cccccCCCeeeEEEeccCceEEEEeCCcCCCc
Q psy3710 3 LGTSSTYKN-GLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKE---RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77 (424)
Q Consensus 3 ~~~l~~h~~-~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 77 (424)
+.++.+|.+ .|.+++|+|+|++||+|+.|+ |+|||+++..... ....|...|.+++|+|+++++++++
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s------- 80 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS------- 80 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------
Confidence 345789988 999999999999999999988 9999988765321 2345889999999999999999998
Q ss_pred CCCeEEEEECCCCc--EEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCC--ceeEEEeeCCCCCeeEEEee
Q psy3710 78 PNNRVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCP--QQLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 78 ~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 149 (424)
.|+++++|+..++. .+..+. |...|.+++|+|++.++++ |+.|++||+.... ..+..+..|. ..+.+++|
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~ 158 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT--QDVKHVVW 158 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC--SCEEEEEE
T ss_pred CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC--CCeEEEEE
Confidence 68999999988764 455666 8899999999999988776 8999999996332 2344555555 44889999
Q ss_pred cCCCCeEEEeeccCCeEEEEeCCCCC-CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCc----------
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLADPE-RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG---------- 218 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~---------- 218 (424)
+|++++|++ |+.|+.|++||.+.+. .....+.+|...|.+++|+|+|++|++++.|+. |++||....
T Consensus 159 ~p~~~~l~s-~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~ 236 (345)
T 3fm0_A 159 HPSQELLAS-ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSG 236 (345)
T ss_dssp CSSSSCEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC-
T ss_pred CCCCCEEEE-EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeec
Confidence 999999998 9999999999998642 134577899999999999999999999999999 999996322
Q ss_pred -----ceeeEEec----ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCC--------eeeccCCCCeEEEEEcCCC
Q psy3710 219 -----QKLNELRR----GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP--------LDIAAHEAPLSCIALNQTG 281 (424)
Q Consensus 219 -----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~--------~~~~~~~~~v~~~~~~~~~ 281 (424)
+++..+.. .+..+++++++..++. ++.|+.|++|+......+. ....+|...|++++|+|++
T Consensus 237 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s-~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 237 SDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT-ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp --CEEEEEEEECSSCSSCEEEEEECTTTCCEEE-EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred cCCccceeEEecCCCCCcEEEEEEecCCCEEEE-EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 22233332 3677889998887665 8899999999987654221 1235799999999999987
Q ss_pred -CEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 282 -TRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 282 -~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
.+||+++.||. |++|++.+++.+..+
T Consensus 316 ~~~laS~s~Dg~-v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 316 PGLLASCSDDGE-VAFWKYQRPEGLHHH 342 (345)
T ss_dssp TTEEEEEETTSC-EEEEEECC-------
T ss_pred ceEEEEcCCCCc-EEEEEecCCCCcccc
Confidence 59999999999 999999988766543
No 27
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.5e-42 Score=298.72 Aligned_cols=282 Identities=14% Similarity=0.127 Sum_probs=236.6
Q ss_pred ccccccCCceEEEEECCCC-CeeEeecCCe-EEEEeCCcCc-----ccccccccCCCeeeEEEeccCceEEEEeCCcCCC
Q psy3710 4 GTSSTYKNGLLYAGFNQDQ-GCFACGMEDG-FRIYNCDPLK-----EKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPK 76 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g-~~la~g~~~~-i~iw~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~ 76 (424)
.+|.+|.+.|++++|+|++ ++|++|+.|+ |++|++.... .......|...|..++|+++++++++++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s------ 84 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS------ 84 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE------
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe------
Confidence 3588999999999999975 8999999998 9999986432 2334566899999999999999999998
Q ss_pred cCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC
Q psy3710 77 YPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 77 ~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
.|++|++||+.+++.+..+. |...|.+++|+|++.++++ |+.|++||++ ++.+..+..|... +.++.++|.
T Consensus 85 -~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~h~~~--v~~~~~~~~ 159 (319)
T 3frx_A 85 -WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQCLATLLGHNDW--VSQVRVVPN 159 (319)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SCEEEEECCCSSC--EEEEEECCC
T ss_pred -CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEeccCCc--EEEEEEccC
Confidence 68999999999999999888 8999999999999977776 8999999985 5566777777644 777788774
Q ss_pred ------CCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec
Q psy3710 153 ------NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 226 (424)
Q Consensus 153 ------~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 226 (424)
+..+++ ++.|+.|++||+++. +....+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+..
T Consensus 160 ~~~~~~~~~l~s-~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 160 EKADDDSVTIIS-AGNDKMVKAWNLNQF-QIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp ------CCEEEE-EETTSCEEEEETTTT-EEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC
T ss_pred CCCCCCccEEEE-EeCCCEEEEEECCcc-hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC
Confidence 346776 999999999999875 566678899999999999999999999999999 99999999998888765
Q ss_pred c--eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC-------CeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy3710 227 G--LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP-------PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVF 297 (424)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iw 297 (424)
+ +..++++|++..++. + .++.+++|++...... ......|...+.+++|+|||++|++|+.|+. |++|
T Consensus 237 ~~~v~~~~~sp~~~~la~-~-~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~-i~vW 313 (319)
T 3frx_A 237 QDEVFSLAFSPNRYWLAA-A-TATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV-IRVW 313 (319)
T ss_dssp CSCEEEEEECSSSSEEEE-E-ETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC-EEEE
T ss_pred CCcEEEEEEcCCCCEEEE-E-cCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce-EEEE
Confidence 4 778999999887765 3 3566999998764311 1112356778999999999999999999999 9999
Q ss_pred ECCCC
Q psy3710 298 DTGSG 302 (424)
Q Consensus 298 d~~~~ 302 (424)
|+.++
T Consensus 314 d~~t~ 318 (319)
T 3frx_A 314 QVMTA 318 (319)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 98764
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=301.95 Aligned_cols=290 Identities=16% Similarity=0.146 Sum_probs=223.5
Q ss_pred EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEEC-------C-----CCcEEEEEeecC
Q psy3710 33 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD-------L-----KKQVVICLEFNA 100 (424)
Q Consensus 33 i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~-------~-----~~~~~~~~~~~~ 100 (424)
.+.|++.+... ..+...+.+++|+|++..++.++ |+++++||. . .+.....+.+..
T Consensus 16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s--------d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMERQLEAARYRSDGALLLGAS--------SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEA 83 (344)
T ss_dssp -------CCSC----SSCCSEEEEEEECTTSCEEEEEE--------CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESS
T ss_pred ccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe--------CCceEEeeceeeeeccccccCCcceeeeeeccCC
Confidence 45677655433 22466799999999999998777 455555542 1 122334455778
Q ss_pred CeEEEEecCCceEEEe--eccEEEEeecCCCceeEEE----eeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCC
Q psy3710 101 PVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVF----ETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP 174 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~ 174 (424)
.|.+++|+|++.+++. ||.|++||+. +++.+..+ .+|. ..+.+++|+|++++|++ |+.|+.|++||+.++
T Consensus 84 ~v~~~~~s~d~~l~~~s~dg~v~lWd~~-~~~~~~~~~~~~~~H~--~~V~~v~~spdg~~l~s-gs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 84 GVADLTWVGERGILVASDSGAVELWELD-ENETLIVSKFCKYEHD--DIVSTVSVLSSGTQAVS-GSKDICIKVWDLAQQ 159 (344)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEEEC-TTSSCEEEEEEEECCS--SCEEEEEECTTSSEEEE-EETTSCEEEEETTTT
T ss_pred CEEEEEEeCCCeEEEEECCCEEEEEecc-CCCceeEeeccccCCC--CCEEEEEECCCCCEEEE-EeCCCeEEEEECCCC
Confidence 8999999999877765 8999999997 55444332 3444 45899999999999998 999999999999986
Q ss_pred CCCCcccccccCCeEEEEEccCCC-EEEEEecCCcEEEEEECCCcceeeEEecc-----eeeeeecCCCCeEEEEeecCC
Q psy3710 175 ERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSGQKLNELRRG-----LCVLCPNSNNSLLAFPGRKSG 248 (424)
Q Consensus 175 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dg 248 (424)
+.+..+.+|.+.|.+++|+|++. +|++++.|+. |++||+++++....+... +..++++|++..++++|+.||
T Consensus 160 -~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 160 -VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNR-ILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp -EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSC-EEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred -cEEEEEcCcCCceEEEEecCCCCCceeeeccccc-cccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 77888999999999999999885 7899999999 999999999888776422 567899999988888899999
Q ss_pred eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEE
Q psy3710 249 HVHLVDLADPERPPLDIAAHEAPLSCIALNQTG-TRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVF 327 (424)
Q Consensus 249 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 327 (424)
.|++||+++++ .+..+.+|...|++++|+|++ ++|++++.|++ |+|||+++++++
T Consensus 238 ~v~~wd~~~~~-~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~---------------------- 293 (344)
T 4gqb_B 238 TVSLVDTKSTS-CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELF---------------------- 293 (344)
T ss_dssp EEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEE----------------------
T ss_pred cEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEE----------------------
Confidence 99999999876 467788999999999999987 56888888888 787777654321
Q ss_pred EccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCe-EEEEeccCcEEEEEecC
Q psy3710 328 SVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNS-IIVICADGSYYKFMFNS 395 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-l~~~~~dg~v~~~~~~~ 395 (424)
....|.+.|+.++|+|++++ |++++.||+|++|++..
T Consensus 294 -------------------------------~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 294 -------------------------------RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -------------------------------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -------------------------------EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 01224566889999999875 66899999999999973
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-41 Score=298.69 Aligned_cols=272 Identities=13% Similarity=0.182 Sum_probs=233.1
Q ss_pred ccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccE
Q psy3710 45 ERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLI 120 (424)
Q Consensus 45 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i 120 (424)
.....|.+.|.+++|+|++.++++++ .|++|++||..+++....+. +...|.+++|+|++..+++ |+.+
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s-------~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSS-------QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEe-------CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 33556899999999999999999998 68999999999999888887 6788999999999988887 8999
Q ss_pred EEEeecCC-----CceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc
Q psy3710 121 KVYTFIQC-----PQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 195 (424)
Q Consensus 121 ~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 195 (424)
++|++... ......+..|... +.++.|+|++..|++ ++.|+.|++||++++ +.+..+.+|...|.+++|+|
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~t-~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNY--LSACSFTNSDMQILT-ASGDGTCALWDVESG-QLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSC--EEEEEECSSSSEEEE-EETTSEEEEEETTTC-CEEEEEECCSSCEEEEEECC
T ss_pred EEEEEeccccccccccceeeeccCCc--EEEEEEeCCCCEEEE-EeCCCcEEEEeCCCC-eEEEEEcCCCCCeEEEEEEe
Confidence 99998522 1345566667644 888999999999998 999999999999986 67788999999999999988
Q ss_pred --CCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeE
Q psy3710 196 --TGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLS 273 (424)
Q Consensus 196 --~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 273 (424)
++++|++++.|+. |++||+++++++..+. +|...|+
T Consensus 207 ~~~g~~l~sgs~Dg~-v~~wd~~~~~~~~~~~-----------------------------------------~h~~~v~ 244 (354)
T 2pbi_B 207 SETGNTFVSGGCDKK-AMVWDMRSGQCVQAFE-----------------------------------------THESDVN 244 (354)
T ss_dssp CSSCCEEEEEETTSC-EEEEETTTCCEEEEEC-----------------------------------------CCSSCEE
T ss_pred CCCCCEEEEEeCCCe-EEEEECCCCcEEEEec-----------------------------------------CCCCCeE
Confidence 5789999999999 9999999887655443 6888899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEECCCCceee--------------eeccCCcEEEEEeCCCcEEEEEccccccccccc
Q psy3710 274 CIALNQTGTRLATASYKGTLIRVFDTGSGQKLN--------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQS 339 (424)
Q Consensus 274 ~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~--------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 339 (424)
+++|+|++++|++++.|++ |++||+++++.+. .|+|++++|++++.|+.|++||+.+++.+.
T Consensus 245 ~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~--- 320 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS--- 320 (354)
T ss_dssp EEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE---
T ss_pred EEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE---
Confidence 9999999999999999999 9999998775543 356889999999999999999998866432
Q ss_pred cceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEE
Q psy3710 340 SLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFM 392 (424)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~ 392 (424)
.+..|.+.|..++|+||+++|++|+.||.|++|+
T Consensus 321 -------------------~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 -------------------ILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -------------------EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -------------------EEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2345678899999999999999999999999995
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.2e-42 Score=305.53 Aligned_cols=308 Identities=15% Similarity=0.147 Sum_probs=225.1
Q ss_pred EEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEE-
Q psy3710 15 YAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVV- 93 (424)
Q Consensus 15 ~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~- 93 (424)
.+.+.+++.++...+......|++.+... ..|...|.+++|+|||++|++++... .+..|+.+++|+..++...
T Consensus 10 g~d~g~~~~~~~~~g~~~~~~w~~p~~~p----~~H~~~V~~v~fSpDG~~las~s~d~-~~~wd~~v~~~~~~~~~~~~ 84 (357)
T 4g56_B 10 GVDLGTENLYFQSNGSSKGSAWGRPVTAP----ACMEVQIGAVRYRRDGALLLAASSLS-SRTWGGSIWVFKDPEGAPNE 84 (357)
T ss_dssp ----------------------------------CCCSEEEEEEECSSSCEEEEEECSS-SSSCCEEEEEESSCC---CG
T ss_pred CCCCCccceEEecCCCccccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEcCCC-CccccCeEEEEECCCCCcce
Confidence 34556666666665555589998765433 35788999999999999999988542 2234789999998776543
Q ss_pred ----EEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCcee--EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCe
Q psy3710 94 ----ICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQL--HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGH 165 (424)
Q Consensus 94 ----~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~ 165 (424)
....|...|.+++|+|++.++++ |+.|++||+. +++.. ..+....+...+.+++|+|++++|++ |+.|+.
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s-gs~dg~ 162 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEIL-EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS-GGKDFS 162 (357)
T ss_dssp GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEE-EETTSC
T ss_pred eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeecc-ccceeEEEeeccCCCCCCEEEEEECCCCCEEEE-EeCCCe
Confidence 23447889999999999987776 8999999996 43322 22233333455899999999999998 999999
Q ss_pred EEEEeCCCCCCCCcccccccCCeEEEEEccCCC-EEEEEecCCcEEEEEECCCcceeeEEec-----ceeeeeecCCCCe
Q psy3710 166 VHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSGQKLNELRR-----GLCVLCPNSNNSL 239 (424)
Q Consensus 166 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~ 239 (424)
|++||++++ +.+..+.+|...|.+++|+|++. ++++++.|+. |++||++++++...+.. .+..++++|++..
T Consensus 163 v~iwd~~~~-~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~-v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~ 240 (357)
T 4g56_B 163 VKVWDLSQK-AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGR-ILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD 240 (357)
T ss_dssp EEEEETTTT-EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSC-EEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT
T ss_pred EEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCc-eEEEECCCCceeeeeeeccccccccchhhhhcccc
Confidence 999999986 67788899999999999999875 7899999999 99999999887765542 2678899999988
Q ss_pred EEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEECCCCceeee-----------
Q psy3710 240 LAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTG-TRLATASYKGTLIRVFDTGSGQKLNE----------- 307 (424)
Q Consensus 240 ~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~~i~iwd~~~~~~~~~----------- 307 (424)
++++|+.|+.|++||+++++ ....+.+|...|++++|+|++ ++|++++.|++ |+|||+++++++..
T Consensus 241 ~la~g~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~~H~~~V~~va 318 (357)
T 4g56_B 241 TFACGDETGNVSLVNIKNPD-SAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDLSHRDFVTGVA 318 (357)
T ss_dssp EEEEEESSSCEEEEESSCGG-GCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEECCCSSCEEEEE
T ss_pred eEEEeecccceeEEECCCCc-EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEECCCCCCEEEEE
Confidence 88889999999999999876 456778999999999999987 57999999999 99999999887764
Q ss_pred ecc-CCcEEEEEeCCCcEEEEEccccc
Q psy3710 308 LRR-DSSYLCVSSDHGTVHVFSVDEAQ 333 (424)
Q Consensus 308 ~~~-~~~~l~~~~~d~~i~iw~~~~~~ 333 (424)
|+| ++++|++++.||+|++|++.+..
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 567 78999999999999999997643
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-41 Score=297.74 Aligned_cols=284 Identities=13% Similarity=0.135 Sum_probs=230.7
Q ss_pred ccccccCCceEEEEE-----CC-CCCeeEeecCCe-EEEEeCCcCc-------ccccccccCCCeeeEEEeccCceEEEE
Q psy3710 4 GTSSTYKNGLLYAGF-----NQ-DQGCFACGMEDG-FRIYNCDPLK-------EKERQDFTDGGLGHVEMLFRCNYLALV 69 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~-----s~-~g~~la~g~~~~-i~iw~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~ 69 (424)
..+.+|.+.|++++| ++ ++++|++|+.|+ |++||+...+ .......|...|.+++|+|++.+++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 358899999999999 77 899999999998 9999987543 223355688999999999999999988
Q ss_pred eCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEe-eCCCCCee
Q psy3710 70 GGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFE-TNPNPKGL 144 (424)
Q Consensus 70 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~-~~~~~~~~ 144 (424)
+ .|++|++||+++++.+..+. |...|.+++|+|++..+++ |+.|++||+. . ....... ...+...+
T Consensus 95 s-------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-~-~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 95 S-------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-G-ECKFSSAEKENHSDWV 165 (343)
T ss_dssp E-------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-S-CEEEECCTTTSCSSCE
T ss_pred c-------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-C-CceeeeecccCCCcee
Confidence 8 68999999999999999888 8999999999999977765 8999999985 2 2222222 11233458
Q ss_pred EEEeecCCC----------CeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEE
Q psy3710 145 CVLCPNSNN----------SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 145 ~~~~~~~~~----------~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 214 (424)
.++.++|++ .++++ ++.||.|++||... .....+.+|...|.+++|+|+|++|++++.|+. |++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd 241 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFAS-VGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWD 241 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEE-EETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEE
T ss_pred eeeeeccccccccccCCCCCEEEE-EcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEE
Confidence 888999887 67777 99999999999543 556678899999999999999999999999999 99999
Q ss_pred CC-CcceeeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCC-eee-----------ccCCCCeEEEEEcC
Q psy3710 215 TG-SGQKLNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP-LDI-----------AAHEAPLSCIALNQ 279 (424)
Q Consensus 215 ~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~-----------~~~~~~v~~~~~~~ 279 (424)
+. .......+. ..+..++++|++..++ ++.|+.|++||+.+.+... ..+ .+|...|.+++|+|
T Consensus 242 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~la--~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 319 (343)
T 2xzm_R 242 ILNLTYPQREFDAGSTINQIAFNPKLQWVA--VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA 319 (343)
T ss_dssp SSCCSSCSEEEECSSCEEEEEECSSSCEEE--EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS
T ss_pred CCCCcccceeecCCCcEEEEEECCCCCEEE--EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC
Confidence 94 444444443 3478899999987554 4568889999998765322 122 26888999999999
Q ss_pred CCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 280 TGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 280 ~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
+|++|++|+.||. |++|++++++
T Consensus 320 ~g~~l~sg~~Dg~-v~~w~~~~g~ 342 (343)
T 2xzm_R 320 LGKKLFAGFTDGV-IRTFSFETSA 342 (343)
T ss_dssp SSCCEEEEETTSE-EEEEEEEEEE
T ss_pred CCCeEEEecCCce-EEEEEEEccC
Confidence 9999999999999 9999987653
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-41 Score=298.43 Aligned_cols=305 Identities=14% Similarity=0.192 Sum_probs=255.7
Q ss_pred ccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEE
Q psy3710 8 TYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWD 86 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd 86 (424)
-|.++|.+++|+|||++++++..++ +.+|.............|.+.|.+++|+|+++++++++ |+.|++||
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--------dg~i~iw~ 78 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG--------KGCVKVWD 78 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC--------BSEEEEEE
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC--------CCeEEEEE
Confidence 3667899999999999999877666 76676554444333445889999999999999998877 69999999
Q ss_pred CCCCcEE---EEE---eecCCeEEEEecCCceEEEe---eccEEEEeecCCCc--eeEEEeeCCCCCeeEEEeecCCCCe
Q psy3710 87 DLKKQVV---ICL---EFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQ--QLHVFETNPNPKGLCVLCPNSNNSL 155 (424)
Q Consensus 87 ~~~~~~~---~~~---~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (424)
+.+++.. ..+ .+...|.+++|+|++..+++ ++.|++||+. ..+ ....+..+. ..+.+++++|++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~--~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA-APTPRIKAELTSSA--PACYALAISPDSKV 155 (337)
T ss_dssp TTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC-CC--EEEEEEECSS--SCEEEEEECTTSSE
T ss_pred CCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC-CCCcceeeecccCC--CceEEEEECCCCCE
Confidence 9876532 222 36789999999999976665 8999999996 444 344455554 45889999999999
Q ss_pred EEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec--ceeeeee
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR--GLCVLCP 233 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~--~~~~~~~ 233 (424)
+++ ++.||.|++||++++ +....+..|...|.+++|+|++++|++++.|+. |++||+++++.+..+.. .+..+++
T Consensus 156 l~~-~~~dg~v~~~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~v~~~~~ 232 (337)
T 1gxr_A 156 CFS-CCSDGNIAVWDLHNQ-TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT-VRSWDLREGRQLQQHDFTSQIFSLGY 232 (337)
T ss_dssp EEE-EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEE-EeCCCcEEEEeCCCC-ceeeeeecccCceEEEEECCCCCEEEEEecCCc-EEEEECCCCceEeeecCCCceEEEEE
Confidence 998 999999999999986 667788889999999999999999999999999 99999999988877653 4778899
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee------
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE------ 307 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~------ 307 (424)
+|++..+++ ++.++.|++||+++.+ ...+..|...|.+++|+|++++|++++.|+. |++||+.+++.+..
T Consensus 233 s~~~~~l~~-~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~ 308 (337)
T 1gxr_A 233 CPTGEWLAV-GMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSKESSS 308 (337)
T ss_dssp CTTSSEEEE-EETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEECSSC
T ss_pred CCCCCEEEE-EcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEecCCCc
Confidence 999887776 8899999999999865 3456689999999999999999999999999 99999999877643
Q ss_pred -----eccCCcEEEEEeCCCcEEEEEcc
Q psy3710 308 -----LRRDSSYLCVSSDHGTVHVFSVD 330 (424)
Q Consensus 308 -----~~~~~~~l~~~~~d~~i~iw~~~ 330 (424)
|+|++++|++++.||.|++|++.
T Consensus 309 v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 309 VLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 56899999999999999999973
No 33
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-42 Score=314.94 Aligned_cols=339 Identities=12% Similarity=0.165 Sum_probs=261.6
Q ss_pred CCeeeEEEeccCc-eEEEEeCCcC---CCcCCCeEEEEECCCCc---EEEEEeecCCeEEEEecCCceEEEe---eccEE
Q psy3710 52 GGLGHVEMLFRCN-YLALVGGGTH---PKYPNNRVMIWDDLKKQ---VVICLEFNAPVKGVRLRRDKIVVVL---EGLIK 121 (424)
Q Consensus 52 ~~i~~~~~~~~~~-~l~~~~~~~~---~~~~d~~i~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~ 121 (424)
..+.+++|+|++. ++++.+.... ....|+.|++||+.+++ .+..+.|...|.+++|+|++.++++ |+.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 4577899999987 5555511000 00158999999998875 5555668899999999999977765 89999
Q ss_pred EEeecC---CCceeEEEeeCCCCCeeEEEeecCC-CCeEEEeeccCCeEEEEeCCCCC------CC--CcccccccCCeE
Q psy3710 122 VYTFIQ---CPQQLHVFETNPNPKGLCVLCPNSN-NSLLAFPGRKSGHVHLVDLADPE------RP--PLDIAAHEAPLS 189 (424)
Q Consensus 122 v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~dg~i~i~d~~~~~------~~--~~~~~~~~~~v~ 189 (424)
+|++.. ..+.+..+..|.. .+.+++|+|+ +.++++ ++.||.|++||+.+.. .. ......|...|.
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDNVLAS-GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTTBEEE-ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred EeecccccccccchhhccCCcc--ceEEEEEcCCCCCEEEE-EcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999973 1346666776664 4788999998 788887 9999999999999863 11 123467999999
Q ss_pred EEEEccC-CCEEEEEecCCcEEEEEECCCcceeeEEec---------ceeeeeecCCCCeEEEEeecCC---eEEEEeCC
Q psy3710 190 CIALNQT-GTRLATASYKGTLIRVFDTGSGQKLNELRR---------GLCVLCPNSNNSLLAFPGRKSG---HVHLVDLA 256 (424)
Q Consensus 190 ~~~~~~~-~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dg---~i~i~d~~ 256 (424)
+++|+|+ +.+|++++.|+. |++||+++++.+..+.. .+..++++|++..++++++.++ .|++||++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNF-ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp EEEECSSCTTEEEEESSSSC-EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETT
T ss_pred EEEeCCCCCcEEEEEcCCCC-EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCC
Confidence 9999999 789999999999 99999999988887754 3778999999988888899998 99999999
Q ss_pred CCCCCCeeec-cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEECCCCceeee------------eccCC-cEEEEEeCC
Q psy3710 257 DPERPPLDIA-AHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTGSGQKLNE------------LRRDS-SYLCVSSDH 321 (424)
Q Consensus 257 ~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~~~~~~~~------------~~~~~-~~l~~~~~d 321 (424)
+...+...+. +|...|.+++|+| ++++|++++.|+. |++||+++++.+.+ |+|++ .+|++++.|
T Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 249 NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD 327 (416)
T ss_dssp STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence 9876777777 8999999999999 9999999999999 99999999988775 45787 899999999
Q ss_pred CcEEEEEccccccccccccc------eeeeccCcc-------ccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcE
Q psy3710 322 GTVHVFSVDEAQKINKQSSL------ASASFLPKY-------FSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSY 388 (424)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v 388 (424)
+.|++|++.++......... ....+.+.. ....+.+.....+..++..++|+|||++|++++.||.|
T Consensus 328 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 328 NKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp SEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred CcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 99999999987654332110 000011000 00001111112245677899999999999999999999
Q ss_pred EEEEecC
Q psy3710 389 YKFMFNS 395 (424)
Q Consensus 389 ~~~~~~~ 395 (424)
++|++..
T Consensus 408 ~~w~~~~ 414 (416)
T 2pm9_A 408 SITNPKI 414 (416)
T ss_dssp CCBCCCC
T ss_pred EEEEecc
Confidence 9999863
No 34
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.9e-41 Score=290.29 Aligned_cols=273 Identities=11% Similarity=0.144 Sum_probs=229.2
Q ss_pred EEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEE
Q psy3710 92 VVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVH 167 (424)
Q Consensus 92 ~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~ 167 (424)
..+++. |.+.|.+++|+|++.++++ |+.|++||+. ++..+..+..+..+ +.++.|+|++++|++ |+.|+.|+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s-~s~d~~i~ 80 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-TQVEVRSIQVTETP--VRAGKFIARKNWIIV-GSDDFRIR 80 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEEECCSSC--EEEEEEEGGGTEEEE-EETTSEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-CCceeEEeeccCCc--EEEEEEeCCCCEEEE-ECCCCEEE
Confidence 345566 8999999999999987776 8999999996 77788888877754 788899999999998 99999999
Q ss_pred EEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce-eeEEecc---eeeeeecCCCCeEEEE
Q psy3710 168 LVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK-LNELRRG---LCVLCPNSNNSLLAFP 243 (424)
Q Consensus 168 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~ 243 (424)
+||+.++ +.+..+.+|.+.|.+++|+|++++|++++.|+. |++||++++.. ...+..+ +..++++|.+..++++
T Consensus 81 vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 81 VFNYNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT-VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEECCCC-cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCe-EEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 9999987 677889999999999999999999999999999 99999988744 4455544 6788999987777788
Q ss_pred eecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEECCCCceeee------------ec
Q psy3710 244 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ--TGTRLATASYKGTLIRVFDTGSGQKLNE------------LR 309 (424)
Q Consensus 244 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~~i~iwd~~~~~~~~~------------~~ 309 (424)
|+.|+.|++||++..........+|...+..++|+| ++.+|++++.|+. |++||+++++++.+ |+
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 999999999999887755555557778999999987 7789999999999 99999999987765 46
Q ss_pred cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC--eEEEEeccCc
Q psy3710 310 RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN--SIIVICADGS 387 (424)
Q Consensus 310 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~~dg~ 387 (424)
|++++|++++.||+|++||+.+++.+.. +..+...+..++|+|+++ ++++|+.| .
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~asg~~~-g 294 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKT----------------------LNVGLERSWCIATHPTGRKNYIASGFDN-G 294 (304)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCCEEEE----------------------ECCSSSSEEEEEECTTCGGGCEEEEETT-E
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeee----------------------ccCCCccEEEEEECCCCCceEEEEecCC-c
Confidence 8899999999999999999998775443 233456678899999875 46766655 5
Q ss_pred EEEEEec
Q psy3710 388 YYKFMFN 394 (424)
Q Consensus 388 v~~~~~~ 394 (424)
+.+|++.
T Consensus 295 ~~~~~~~ 301 (304)
T 2ynn_A 295 FTVLSLG 301 (304)
T ss_dssp EEEEECC
T ss_pred eEEEEec
Confidence 6777764
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-41 Score=299.36 Aligned_cols=291 Identities=16% Similarity=0.157 Sum_probs=253.9
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
..+.+|.+.|++++|+|+|++|++|+.++ |++||+.+++.......|.+.|.+++|+|+++++++++ .|+.|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~dg~i 98 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS-------ADYSI 98 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTTEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe-------CCCeE
Confidence 45889999999999999999999999888 99999999988877778899999999999999999888 68999
Q ss_pred EEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---e-----ccEEEEeecCCC----------ceeEEEeeCCCCCee
Q psy3710 83 MIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---E-----GLIKVYTFIQCP----------QQLHVFETNPNPKGL 144 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~-----~~i~v~~~~~~~----------~~~~~~~~~~~~~~~ 144 (424)
++||+.+++.+..+.+...+.+++|+|++..+++ + +.|++||+.... .....+..+.....+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 9999999999999999999999999999977775 5 899999996332 133444555544468
Q ss_pred EEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEE
Q psy3710 145 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 224 (424)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 224 (424)
.+++++|+++++++ ++.||.|++||+.+.......+..|...|.+++|+|++++|++++.|+. |++||+++++.+..+
T Consensus 179 ~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 179 TVAGWSTKGKYIIA-GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEECGGGCEEEE-EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEE-EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeee
Confidence 89999999999998 9999999999999854677788899999999999999999999999999 999999999988887
Q ss_pred ecc--eeeeeecCCCCeEEEEeecCC--------------eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEe
Q psy3710 225 RRG--LCVLCPNSNNSLLAFPGRKSG--------------HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 225 ~~~--~~~~~~~~~~~~~~~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 288 (424)
... +..++++|++..+++ ++.++ .+++||+.+++ ....+.+|...|++++|+|++++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 257 ETDCPLNTAVITPLKEFIIL-GGGQEAKDVTTTSANEGKFEARFYHKIFEE-EIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp ECSSCEEEEEECSSSSEEEE-EECCC-------------CEEEEEETTTCC-EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCceeEEecCCCceEEE-eecCCCceEEEEecCCCcceeEEEecCCCc-chhheecccCcEEEEEECCCCCEEEEEc
Confidence 643 778899999998888 55555 89999998876 4566778999999999999999999999
Q ss_pred CCCcEEEEEECCCCceee
Q psy3710 289 YKGTLIRVFDTGSGQKLN 306 (424)
Q Consensus 289 ~d~~~i~iwd~~~~~~~~ 306 (424)
.||. |++|+++++....
T Consensus 335 ~dg~-v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 335 EDGF-IRLHHFEKSYFDF 351 (369)
T ss_dssp TTSE-EEEEEECHHHHTC
T ss_pred CCCe-EEEEECccccchh
Confidence 9999 9999998765443
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.2e-40 Score=288.02 Aligned_cols=273 Identities=16% Similarity=0.257 Sum_probs=235.3
Q ss_pred EEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEE
Q psy3710 92 VVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVH 167 (424)
Q Consensus 92 ~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~ 167 (424)
....+. |...|.+++|+|++.++++ |+.|++|++. .++....+..|. ..+.+++|+|++++|++ |+.|+.|+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~-~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s-~~~d~~i~ 90 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHK--LGISDVAWSSDSNLLVS-ASDDKTLK 90 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEECCCS--SCEEEEEECTTSSEEEE-EETTSEEE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC-CcccchhhccCC--CceEEEEEcCCCCEEEE-ECCCCEEE
Confidence 344455 7899999999999987776 8999999996 677777777776 44889999999999998 99999999
Q ss_pred EEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEe
Q psy3710 168 LVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPG 244 (424)
Q Consensus 168 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (424)
+||++++ +.+..+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+..+ +..++++|++..++ ++
T Consensus 91 vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 167 (312)
T 4ery_A 91 IWDVSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV-SS 167 (312)
T ss_dssp EEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EE
T ss_pred EEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE-EE
Confidence 9999986 677788999999999999999999999999999 999999999988888754 67788999887665 59
Q ss_pred ecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec---------------
Q psy3710 245 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR--------------- 309 (424)
Q Consensus 245 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--------------- 309 (424)
+.||.|++||+++++........+..++..++|+|++++|++++.|+. |++||+++++.+..+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 246 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEEEC
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEEEe
Confidence 999999999999876544444567788999999999999999999999 9999999998877653
Q ss_pred cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEe--ccCc
Q psy3710 310 RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVIC--ADGS 387 (424)
Q Consensus 310 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~--~dg~ 387 (424)
+++.+|++++.||.|++||+.+++.+.. +..|...+..++|+|++++|++++ .||.
T Consensus 247 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~----------------------~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~ 304 (312)
T 4ery_A 247 TGGKWIVSGSEDNLVYIWNLQTKEIVQK----------------------LQGHTDVVISTACHPTENIIASAALENDKT 304 (312)
T ss_dssp SSSCEEEECCTTSCEEEEETTTCCEEEE----------------------ECCCSSCEEEEEECSSSSEEEEEECTTTCC
T ss_pred CCCcEEEEECCCCEEEEEECCCchhhhh----------------------hhccCCcEEEEeecCcCCceEEEEccCCcc
Confidence 4678999999999999999998765432 445677889999999999999987 6999
Q ss_pred EEEEEec
Q psy3710 388 YYKFMFN 394 (424)
Q Consensus 388 v~~~~~~ 394 (424)
|++|+.+
T Consensus 305 i~~W~~d 311 (312)
T 4ery_A 305 IKLWKSD 311 (312)
T ss_dssp EEEEECC
T ss_pred EEEecCC
Confidence 9999974
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-41 Score=307.98 Aligned_cols=314 Identities=12% Similarity=0.126 Sum_probs=254.3
Q ss_pred CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---eccEEEEeecCCC
Q psy3710 53 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCP 129 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~ 129 (424)
.+..++|+|+++++++++ .|+.+++||..+++....+.....+....+++++..+++ |+.|++||+. ..
T Consensus 58 ~~~~~~~s~~g~~l~~~~-------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKAR-------LDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSN-FN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEE-------ETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTT-SC
T ss_pred cccceeeeecCCeEEEEE-------cCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCC-Cc
Confidence 345789999999999998 589999999987766555554444555678899877765 8999999996 66
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcE
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTL 209 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~ 209 (424)
+....+..|. ..+.+++|+|++++|++ |+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 130 ~~~~~~~~h~--~~v~~~~~~~~~~~l~s-~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~- 204 (420)
T 3vl1_A 130 LQREIDQAHV--SEITKLKFFPSGEALIS-SSQDMQLKIWSVKDG-SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT- 204 (420)
T ss_dssp EEEEETTSSS--SCEEEEEECTTSSEEEE-EETTSEEEEEETTTC-CCCEEEECCSSCEEEEEEETTTTEEEEEETTSC-
T ss_pred ceeeeccccc--CccEEEEECCCCCEEEE-EeCCCeEEEEeCCCC-cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc-
Confidence 6666666666 44899999999999998 999999999999986 677888999999999999999999999999999
Q ss_pred EEEEECCCcceeeEEecc---------------------------eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCC
Q psy3710 210 IRVFDTGSGQKLNELRRG---------------------------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP 262 (424)
Q Consensus 210 i~iwd~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 262 (424)
|++||+++++.+..+..+ +..++++|++..++ +|+.||.|++||+++++...
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSGVITVHNVFSKEQTI 283 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTSCEEEEETTTCCEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCCeEEEEECCCCceeE
Confidence 999999999988887632 23355667766654 59999999999999887655
Q ss_pred eeeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEECCCCce-eeee------------ccCCcEEEEEeCCCcEEEEE
Q psy3710 263 LDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSGQK-LNEL------------RRDSSYLCVSSDHGTVHVFS 328 (424)
Q Consensus 263 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~~~-~~~~------------~~~~~~l~~~~~d~~i~iw~ 328 (424)
.....|...|.+++|+|+++ +|++++.||. |++||+++++. +..+ .+++++|++++.|+.|++|+
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEE
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEe
Confidence 55567899999999999998 9999999999 99999998754 4433 35788999999999999999
Q ss_pred ccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC---eEEEEeccCcEEEEEec
Q psy3710 329 VDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN---SIIVICADGSYYKFMFN 394 (424)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~l~~~~~dg~v~~~~~~ 394 (424)
+...+.......... ......+.+.+..++|+|+++ .|++++.+|.+.+|++.
T Consensus 363 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 363 ISDPESERPAIEFET-------------PTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp ECCTTCCSCEECTTS-------------CEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred ccCCCCCccceeccC-------------ccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 988543222111000 112345677899999999999 78888889999999986
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-40 Score=294.02 Aligned_cols=284 Identities=14% Similarity=0.142 Sum_probs=229.9
Q ss_pred cccccCCceEEEEECCC-CCeeEeecCCe-EEEEeCCcCcc-----cccccccCCCeeeEEEeccCceEEEEeCCcCCCc
Q psy3710 5 TSSTYKNGLLYAGFNQD-QGCFACGMEDG-FRIYNCDPLKE-----KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~-g~~la~g~~~~-i~iw~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 77 (424)
+|+||.+.|++++|+|+ +++||+|+.|+ |+|||+.+.+. ......|...|.++.|+|+++++++++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~------- 105 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS------- 105 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-------
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-------
Confidence 58899999999999998 58999999988 99999876553 223456889999999999999999988
Q ss_pred CCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC-
Q psy3710 78 PNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN- 152 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 152 (424)
.|+.|++|+...+....... +...+....+++++..+++ |+.+++||.............+.. .+..++++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 183 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSE--WVSCVRFSPNS 183 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSS--CEEEEEECSCS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccC--cccceEEccCC
Confidence 68999999999888887777 6788889999998876665 899999998633333333344443 4555666554
Q ss_pred -CCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc--ee
Q psy3710 153 -NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG--LC 229 (424)
Q Consensus 153 -~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~--~~ 229 (424)
..++++ ++.|+.|++||+++. +....+.+|.++|.+++|+|++++|++++.|+. |++||+++.+.+..+..+ +.
T Consensus 184 ~~~~~~s-~~~d~~i~i~d~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~~~~v~ 260 (340)
T 4aow_A 184 SNPIIVS-CGWDKLVKVWNLANC-KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDGGDIIN 260 (340)
T ss_dssp SSCEEEE-EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECSSCEE
T ss_pred CCcEEEE-EcCCCEEEEEECCCC-ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecCCceEE
Confidence 445565 999999999999986 677788899999999999999999999999999 999999999998888765 66
Q ss_pred eeeecCCCCeEEEEeecCCeEEEEeCCCCCC--------CCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCC
Q psy3710 230 VLCPNSNNSLLAFPGRKSGHVHLVDLADPER--------PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~ 301 (424)
.++++|++..+ +++.|+.|++||+++... ......+|...|++++|+|+|++|++|+.||. |+|||+++
T Consensus 261 ~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~-v~iW~~~t 337 (340)
T 4aow_A 261 ALCFSPNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL-VRVWQVTI 337 (340)
T ss_dssp EEEECSSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC-EEEEEEEC
T ss_pred eeecCCCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEeCCC
Confidence 77888876433 367899999999986531 12234578999999999999999999999999 99999998
Q ss_pred Cc
Q psy3710 302 GQ 303 (424)
Q Consensus 302 ~~ 303 (424)
|+
T Consensus 338 Gt 339 (340)
T 4aow_A 338 GT 339 (340)
T ss_dssp --
T ss_pred cC
Confidence 85
No 39
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.8e-41 Score=300.34 Aligned_cols=278 Identities=14% Similarity=0.184 Sum_probs=227.5
Q ss_pred cccCCceEEEEECCCCCeeEeecCCeEEEEeCCcCccccccccc------------------CCCeeeEEEeccCceEEE
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFT------------------DGGLGHVEMLFRCNYLAL 68 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~ 68 (424)
.+|.+.|++++|+|||++||+|+++.+++|++.+++.......+ ...|.+++|+|+++++++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 36999999999999999999998767999999887764433222 124889999999999999
Q ss_pred EeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCee
Q psy3710 69 VGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGL 144 (424)
Q Consensus 69 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 144 (424)
++ .|++|++||+.+++.+..+. |...|.+++|+|++..+++ |+.|++||++ +++....+..+ ..+
T Consensus 141 ~~-------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~~~~---~~v 209 (393)
T 1erj_A 141 GA-------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR-TGQCSLTLSIE---DGV 209 (393)
T ss_dssp EE-------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECS---SCE
T ss_pred Ec-------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC-CCeeEEEEEcC---CCc
Confidence 88 68999999999999988888 8999999999999977765 8999999997 66666666543 347
Q ss_pred EEEeecC-CCCeEEEeeccCCeEEEEeCCCCCCCCccc-------ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECC
Q psy3710 145 CVLCPNS-NNSLLAFPGRKSGHVHLVDLADPERPPLDI-------AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 216 (424)
Q Consensus 145 ~~~~~~~-~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 216 (424)
.+++++| +++++++ |+.||.|++||++++ ..+..+ .+|...|.+++|+|++++|++++.|+. |++||++
T Consensus 210 ~~~~~~~~~~~~l~~-~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~ 286 (393)
T 1erj_A 210 TTVAVSPGDGKYIAA-GSLDRAVRVWDSETG-FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQ 286 (393)
T ss_dssp EEEEECSTTCCEEEE-EETTSCEEEEETTTC-CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC-
T ss_pred EEEEEECCCCCEEEE-EcCCCcEEEEECCCC-cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECC
Confidence 7889998 8888887 999999999999876 333333 579999999999999999999999999 9999997
Q ss_pred Ccc------------eeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC--
Q psy3710 217 SGQ------------KLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ-- 279 (424)
Q Consensus 217 ~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-- 279 (424)
+.. +...+.++ +..+++++++..++ +|+.|+.|++||+.+++ +...+.+|...|.+++|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~~-~~~~l~~h~~~v~~v~~~~~~ 364 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSGN-PLLMLQGHRNSVISVAVANGS 364 (393)
T ss_dssp --------------CEEEEEECCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECSSC
T ss_pred CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCCe-EEEEECCCCCCEEEEEecCCc
Confidence 643 33344433 56788888887665 59999999999999876 4567789999999999986
Q ss_pred ----CCCEEEEEeCCCcEEEEEECCC
Q psy3710 280 ----TGTRLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 280 ----~~~~l~~~~~d~~~i~iwd~~~ 301 (424)
++++|++|+.|+. |++|+++.
T Consensus 365 ~~~p~~~~l~sgs~Dg~-i~iW~~~~ 389 (393)
T 1erj_A 365 SLGPEYNVFATGSGDCK-ARIWKYKK 389 (393)
T ss_dssp TTCTTCEEEEEEETTSE-EEEEEEEE
T ss_pred CcCCCCCEEEEECCCCc-EEECcccc
Confidence 5778888888888 88888754
No 40
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-40 Score=288.16 Aligned_cols=278 Identities=11% Similarity=0.176 Sum_probs=224.8
Q ss_pred cccccCCCeeeEEEeccC-ceEEEEeCCcCCCcCCCeEEEEECCC-----CcEEEEEe-ecCCeEEEEecCCceEEEe--
Q psy3710 46 RQDFTDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLK-----KQVVICLE-FNAPVKGVRLRRDKIVVVL-- 116 (424)
Q Consensus 46 ~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~~~~d~~i~iwd~~~-----~~~~~~~~-~~~~v~~~~~~~~~~~~~~-- 116 (424)
....|.+.|.+++|+|++ +.+++++ .|++|++|++.. +..+..+. |...|.+++|+|++.++++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s-------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSAS-------RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEE-------TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEec-------CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 456789999999999976 7788877 689999999853 33456666 8999999999999988776
Q ss_pred -eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc
Q psy3710 117 -EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 195 (424)
Q Consensus 117 -~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 195 (424)
|+.|++||+. +++.+..+..|... +.+++++|++.++++ |+.|+.|++||++. ..+..+.+|...|.+++|+|
T Consensus 85 ~D~~v~~wd~~-~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s-~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 85 WDKTLRLWDVA-TGETYQRFVGHKSD--VMSVDIDKKASMIIS-GSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp TTSEEEEEETT-TTEEEEEEECCSSC--EEEEEECTTSCEEEE-EETTSCEEEEETTS--CEEEEECCCSSCEEEEEECC
T ss_pred CCCEEEEEECC-CCCeeEEEccCCCc--EEEEEEcCCCCEEEE-EeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEcc
Confidence 8999999997 78888888888754 889999999999998 99999999999975 56778889999999999998
Q ss_pred C------CCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCC
Q psy3710 196 T------GTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE 269 (424)
Q Consensus 196 ~------~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 269 (424)
. +..+++++.|+. |++||+++.+....+ .+|.
T Consensus 159 ~~~~~~~~~~l~s~~~d~~-i~~wd~~~~~~~~~~-----------------------------------------~~h~ 196 (319)
T 3frx_A 159 NEKADDDSVTIISAGNDKM-VKAWNLNQFQIEADF-----------------------------------------IGHN 196 (319)
T ss_dssp C------CCEEEEEETTSC-EEEEETTTTEEEEEE-----------------------------------------CCCC
T ss_pred CCCCCCCccEEEEEeCCCE-EEEEECCcchhheee-----------------------------------------cCCC
Confidence 5 448999999999 999999876554333 2688
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee-----------eccCCcEEEEEeCCCcEEEEEcccccccccc
Q psy3710 270 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQ 338 (424)
Q Consensus 270 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 338 (424)
..|.+++|+|++++|++++.|+. |++||+.+++.+.+ |+|++.++++++.+ .+++|++..+..+...
T Consensus 197 ~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 197 SNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDL 274 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeecc
Confidence 88999999999999999999999 99999988877654 46788888887754 5899998875544322
Q ss_pred ccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 339 SSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
..... . ....+...+..++|+|||++|++|+.||.|++|++.
T Consensus 275 ~~~~~----~----------~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 275 RPEFA----G----------YSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CCCCT----T----------CCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred Ccccc----c----------cccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 11000 0 011234567889999999999999999999999986
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-41 Score=293.14 Aligned_cols=282 Identities=16% Similarity=0.158 Sum_probs=220.0
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc--cccc-cc-cCCCeeeEEEeccCceEEEEeCCcCCCcC
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE--KERQ-DF-TDGGLGHVEMLFRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~--~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 78 (424)
..+.+|.++|.+++|+|+ +||+|+.++ |++|++..... .... .. |.+.|.+++|+|+++++++++ .
T Consensus 8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-------~ 78 (330)
T 2hes_X 8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-------F 78 (330)
T ss_dssp EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------T
T ss_pred eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------C
Confidence 457899999999999998 899999888 99999987532 2222 23 888999999999999999988 6
Q ss_pred CCeEEEEECCC-------CcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCC---ceeEEEeeCCCCCee
Q psy3710 79 NNRVMIWDDLK-------KQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCP---QQLHVFETNPNPKGL 144 (424)
Q Consensus 79 d~~i~iwd~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~---~~~~~~~~~~~~~~~ 144 (424)
|++|++||... .+.+..+. |...|.+++|+|++.++++ |+.|++||+.... +.+..+..|.. .+
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--~v 156 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--DV 156 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--CE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--ce
Confidence 89999999853 34555665 8899999999999988876 8999999995232 34556666664 48
Q ss_pred EEEeecCCCCeEEEeeccCCeEEEEeCCCCC-CCCcccccccCCeEEEEEccC--CCEEEEEecCCcEEEEEECCCc---
Q psy3710 145 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPE-RPPLDIAAHEAPLSCIALNQT--GTRLATASYKGTLIRVFDTGSG--- 218 (424)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~~i~iwd~~~~--- 218 (424)
.+++|+|++.+|++ |+.|+.|++||...+. ..+..+.+|.+.|.+++|+|+ +..|++++.|+. |++||++.+
T Consensus 157 ~~v~~~p~~~~l~s-~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~ 234 (330)
T 2hes_X 157 KHVIWHPSEALLAS-SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDED 234 (330)
T ss_dssp EEEEECSSSSEEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTT
T ss_pred EEEEECCCCCEEEE-EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCcc
Confidence 89999999999998 9999999999987532 355678899999999999998 678999999999 999998764
Q ss_pred -----ceeeEEec----ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC--CCeeeccCCC-CeEEEEEcC--CCCEE
Q psy3710 219 -----QKLNELRR----GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER--PPLDIAAHEA-PLSCIALNQ--TGTRL 284 (424)
Q Consensus 219 -----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~-~v~~~~~~~--~~~~l 284 (424)
.....+.. .+..+++++++ ++++++.||.|++||..+++. ......+|.. .|.+++|+| ++++|
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL 312 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE
T ss_pred ccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE
Confidence 23333332 36778888554 566799999999999876531 1123357877 899999999 78999
Q ss_pred EEEeCCCcEEEEEECCC
Q psy3710 285 ATASYKGTLIRVFDTGS 301 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~ 301 (424)
++++.|+. |++||+++
T Consensus 313 as~s~Dg~-v~~W~~~~ 328 (330)
T 2hes_X 313 ATGGDDGI-VNFWSLEK 328 (330)
T ss_dssp EEEETTSE-EEEEEC--
T ss_pred EEecCCCc-EEEEEecc
Confidence 99999999 99999864
No 42
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.8e-40 Score=292.13 Aligned_cols=306 Identities=31% Similarity=0.473 Sum_probs=237.2
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
.+.+|.+.|++++|+|||++||+|++++++||++++++....... ..+..+++.++++.+++++++ |++|++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------d~~v~i 85 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV------KEVVHI 85 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS------TTEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC------ccEEEE
Confidence 357899999999999999999999999999999988776544333 357889999999999887765 689999
Q ss_pred EECCCCcEEEEEeecCCeEEEEecCCceEEEeeccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe-eccC
Q psy3710 85 WDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP-GRKS 163 (424)
Q Consensus 85 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~d 163 (424)
||..+++.+..+.+...|.+++++++...++.++.|++||+....+.+..+.. +..++++ ++ .+++++ |+.+
T Consensus 86 Wd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~--s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEF--SN--GLLVYSNEFNL 158 (355)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEE--ET--TEEEEEESSCT
T ss_pred EECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEE--Ec--cEEEEeCCCcC
Confidence 99999999999999999999999999988888999999999733256655554 3334444 44 667765 7899
Q ss_pred CeEEEEeCCCCC--------------CC-CcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecce
Q psy3710 164 GHVHLVDLADPE--------------RP-PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGL 228 (424)
Q Consensus 164 g~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~ 228 (424)
|.|++||+.++. .+ ...+.+|.++|.+++|+|+|++|++++.|++.|++||+++++++..+..+
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g- 237 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG- 237 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-
Confidence 999999999752 12 67788999999999999999999999999932999999988877665411
Q ss_pred eeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 229 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
.|...|.+++|+|++++|++++.|++ |++||++.+.....
T Consensus 238 --------------------------------------~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~~~~~- 277 (355)
T 3vu4_A 238 --------------------------------------LDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQDNKR- 277 (355)
T ss_dssp --------------------------------------TCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCSCCCS-
T ss_pred --------------------------------------CCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCCCccc-
Confidence 38899999999999999999999999 99999976521110
Q ss_pred ccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCC---CceEEEEecCCCeEEEEecc
Q psy3710 309 RRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSD---PPCICAFGADSNSIIVICAD 385 (424)
Q Consensus 309 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~l~~~~~d 385 (424)
...... +.|.+....|.+..+..+.. +...++|++|+++|++++.|
T Consensus 278 ---------------------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 278 ---------------------------HALKGW----INMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp ---------------------------EETTTT----EECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred ---------------------------ccccce----eeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 000000 23444455566655555433 34789999999999999999
Q ss_pred CcEEEEEecCCc
Q psy3710 386 GSYYKFMFNSKG 397 (424)
Q Consensus 386 g~v~~~~~~~~~ 397 (424)
|.+++|++..++
T Consensus 327 g~~~~~~~~~~~ 338 (355)
T 3vu4_A 327 RMIETFKVVFDD 338 (355)
T ss_dssp TEEEEEEEEEET
T ss_pred CeEEEEEEEcCC
Confidence 999999998543
No 43
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=295.75 Aligned_cols=313 Identities=11% Similarity=0.127 Sum_probs=233.9
Q ss_pred cccccCCceEEEEECC-CCCeeEeecCCe-EEEEeCCcCccccccc-------------ccCCCeeeEEEec-cCceEEE
Q psy3710 5 TSSTYKNGLLYAGFNQ-DQGCFACGMEDG-FRIYNCDPLKEKERQD-------------FTDGGLGHVEMLF-RCNYLAL 68 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~-~g~~la~g~~~~-i~iw~~~~~~~~~~~~-------------~~~~~i~~~~~~~-~~~~l~~ 68 (424)
.+.+|.+.|++++|+| ++++|++|+.++ |++||+.+.+...... .|.+.|.+++|+| ++..+++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 3678999999999999 999999999888 9999998877644332 4789999999999 6678887
Q ss_pred EeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCc---eEEEe---eccEEEEeecCCCceeEEEeeCCCCC
Q psy3710 69 VGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK---IVVVL---EGLIKVYTFIQCPQQLHVFETNPNPK 142 (424)
Q Consensus 69 ~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~ 142 (424)
++ .|+.|++||+.+++.+..+.+...+.++.+++.. .++++ ++.|++||++ .++.+..+..|..
T Consensus 118 ~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~~~~~~~-- 187 (408)
T 4a11_B 118 SS-------FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK-SGSCSHILQGHRQ-- 187 (408)
T ss_dssp EE-------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS-SSCCCEEECCCCS--
T ss_pred Ee-------CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC-CcceeeeecCCCC--
Confidence 77 5899999999999999999999999999998854 35554 8999999997 6777788877764
Q ss_pred eeEEEeecCCCCe-EEEeeccCCeEEEEeCCCCCCCCccc---------------ccccCCeEEEEEccCCCEEEEEecC
Q psy3710 143 GLCVLCPNSNNSL-LAFPGRKSGHVHLVDLADPERPPLDI---------------AAHEAPLSCIALNQTGTRLATASYK 206 (424)
Q Consensus 143 ~~~~~~~~~~~~~-l~~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~d 206 (424)
.+.+++++|+++. +++ |+.||.|++||++........+ ..|...|.+++|+|++++|++++.|
T Consensus 188 ~v~~~~~~~~~~~ll~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 188 EILAVSWSPRYDYILAT-ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp CEEEEEECSSCTTEEEE-EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCcEEEE-EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 4889999999996 555 9999999999998764333333 6789999999999999999999999
Q ss_pred CcEEEEEECCCcceeeEEecc-------eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC
Q psy3710 207 GTLIRVFDTGSGQKLNELRRG-------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 279 (424)
Q Consensus 207 ~~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 279 (424)
+. |++||+++++....+... .............++.++.++.|++||+.+++ ....+.+|...|++++|+|
T Consensus 267 g~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-~~~~~~~~~~~v~~~~~s~ 344 (408)
T 4a11_B 267 NR-MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE-QITMLKGHYKTVDCCVFQS 344 (408)
T ss_dssp SC-EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC-EEEEECCCSSCEEEEEEET
T ss_pred Ce-EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc-ceeeeccCCCeEEEEEEcC
Confidence 99 999999998766544322 11222233333334447889999999999876 4567778999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEECCCCceeeeec---------c-CCcEEEEEeCCCcEEEEEccc
Q psy3710 280 TGTRLATASYKGTLIRVFDTGSGQKLNELR---------R-DSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 280 ~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~---------~-~~~~l~~~~~d~~i~iw~~~~ 331 (424)
++++|++++.||. |++||+++++.+.... + ....+.+.+.++.+++|+...
T Consensus 345 ~~~~l~s~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 345 NFQELYSGSRDCN-ILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp TTTEEEEEETTSC-EEEEEECC----------------------------------------
T ss_pred CCCEEEEECCCCe-EEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCcc
Confidence 9999999999999 9999999988776532 1 334566777899999998764
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-42 Score=311.23 Aligned_cols=310 Identities=14% Similarity=0.126 Sum_probs=251.1
Q ss_pred ccCCceEEEEECCCCC-eeEee----------cCCe-EEEEeCCcCccc--ccccccCCCeeeEEEeccCceEEEEeCCc
Q psy3710 8 TYKNGLLYAGFNQDQG-CFACG----------MEDG-FRIYNCDPLKEK--ERQDFTDGGLGHVEMLFRCNYLALVGGGT 73 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~-~la~g----------~~~~-i~iw~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 73 (424)
.+...|.+++|+|+|+ +|++| +.++ |+||++.+++.. .....|...+.+++|+|+++++++++
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--- 86 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL--- 86 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE---
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc---
Confidence 3556799999999997 88888 7777 999999887632 22234688999999999999999988
Q ss_pred CCCcCCCeEEEEECCC----CcEEEEEe-ecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCc------eeEE---E
Q psy3710 74 HPKYPNNRVMIWDDLK----KQVVICLE-FNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQ------QLHV---F 135 (424)
Q Consensus 74 ~~~~~d~~i~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~------~~~~---~ 135 (424)
.|+.|++||+.+ .+.+..+. |...|.+++|+|+ +.++++ |+.|++||+. ..+ .... .
T Consensus 87 ----~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 87 ----DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN-KCTESPSNYTPLTPGQS 161 (416)
T ss_dssp ----SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT-TTSSCTTTCCCBCCCCS
T ss_pred ----cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC-CCccccccccccccccc
Confidence 589999999987 34666666 8899999999998 655554 8999999997 333 2222 2
Q ss_pred eeCCCCCeeEEEeecCC-CCeEEEeeccCCeEEEEeCCCCCCCCcccccc------cCCeEEEEEccCC-CEEEEEecCC
Q psy3710 136 ETNPNPKGLCVLCPNSN-NSLLAFPGRKSGHVHLVDLADPERPPLDIAAH------EAPLSCIALNQTG-TRLATASYKG 207 (424)
Q Consensus 136 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~ 207 (424)
..|. ..+.+++|+|+ +.++++ ++.||.|++||++++ +....+..| ...|.+++|+|++ .++++++.|+
T Consensus 162 ~~~~--~~v~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 162 MSSV--DEVISLAWNQSLAHVFAS-AGSSNFASIWDLKAK-KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp CCSS--CCCCEEEECSSCTTEEEE-ESSSSCEEEEETTTT-EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred cCCC--CCeeEEEeCCCCCcEEEE-EcCCCCEEEEECCCC-CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 3333 45788999999 667776 999999999999986 555555555 7899999999997 6899999998
Q ss_pred ---cEEEEEECCCc-ceeeEEe-c---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC
Q psy3710 208 ---TLIRVFDTGSG-QKLNELR-R---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 279 (424)
Q Consensus 208 ---~~i~iwd~~~~-~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 279 (424)
. |++||++++ +++..+. . .+..++++|.+..++++++.|+.|++||+++++ ....+..|...|.+++|+|
T Consensus 238 ~~~~-i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 238 NDPS-ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE-QLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp SSCC-CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC-EEEEEECSSSCCCCEEECT
T ss_pred CCce-EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc-cceeecCCCCceEEEEECC
Confidence 9 999999986 5555555 3 378889999555666669999999999999875 4567779999999999999
Q ss_pred CC-CEEEEEeCCCcEEEEEECCCCce-----------------------------------------------eeeeccC
Q psy3710 280 TG-TRLATASYKGTLIRVFDTGSGQK-----------------------------------------------LNELRRD 311 (424)
Q Consensus 280 ~~-~~l~~~~~d~~~i~iwd~~~~~~-----------------------------------------------~~~~~~~ 311 (424)
++ .+|++++.|+. |++||+.+++. -..|+|+
T Consensus 316 ~~~~~l~s~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 394 (416)
T 2pm9_A 316 EAPDLFACASFDNK-IEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG 394 (416)
T ss_dssp TCTTEEEECCSSSE-EEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETT
T ss_pred CCCCEEEEEecCCc-EEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeC
Confidence 98 89999999999 99999976542 1237889
Q ss_pred CcEEEEEeCCCcEEEEEcccc
Q psy3710 312 SSYLCVSSDHGTVHVFSVDEA 332 (424)
Q Consensus 312 ~~~l~~~~~d~~i~iw~~~~~ 332 (424)
|++|++++.|+.|+||++.+.
T Consensus 395 g~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 395 GKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp TEEECBCTTSSCBCCBCCCCC
T ss_pred CeEEEEeCCCCeEEEEEeccC
Confidence 999999999999999999863
No 45
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-39 Score=293.61 Aligned_cols=274 Identities=13% Similarity=0.186 Sum_probs=225.7
Q ss_pred EEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCC----------------CCCeeEEEeecCCCCe
Q psy3710 94 ICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNP----------------NPKGLCVLCPNSNNSL 155 (424)
Q Consensus 94 ~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 155 (424)
..+.|...|.+++|+|++.++++ ++.+++|++. +++.+..+..+. ....+.+++|+|++++
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVS-DGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEECBSCEEEEETT-TCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred EecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEec-CCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 44568999999999999988887 8899999996 666666655432 1124789999999999
Q ss_pred EEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec--ceeeeee
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR--GLCVLCP 233 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~--~~~~~~~ 233 (424)
|++ |+.|+.|++||+.++ +....+.+|...|.+++|+|++++|++++.|+. |++||+++++....+.. .+..+++
T Consensus 138 l~s-~~~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~v~~~~~ 214 (393)
T 1erj_A 138 LAT-GAEDRLIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT-VRIWDLRTGQCSLTLSIEDGVTTVAV 214 (393)
T ss_dssp EEE-EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEE-EcCCCeEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCc-EEEEECCCCeeEEEEEcCCCcEEEEE
Confidence 998 999999999999986 667788899999999999999999999999999 99999999988777654 4778889
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCe------eeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc----
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPL------DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ---- 303 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~---- 303 (424)
+|....++++|+.|+.|++||++++..... ...+|...|.+++|+|++++|++++.|+. |++||+++..
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANNKSD 293 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC--------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCCCccc
Confidence 996666667799999999999988653211 12479999999999999999999999999 9999997632
Q ss_pred --------eee------------eeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeec
Q psy3710 304 --------KLN------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIP 363 (424)
Q Consensus 304 --------~~~------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (424)
+.. .+++++++|++++.|+.|++||+.+++.+. .+..|
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~----------------------~l~~h 351 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL----------------------MLQGH 351 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE----------------------EEECC
T ss_pred ccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE----------------------EECCC
Confidence 221 256789999999999999999999876532 24567
Q ss_pred CCCceEEEEec------CCCeEEEEeccCcEEEEEec
Q psy3710 364 SDPPCICAFGA------DSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 364 ~~~~~~~~~s~------~~~~l~~~~~dg~v~~~~~~ 394 (424)
.+.+..++|++ ++++|++|+.||.|++|++.
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 77888899876 68899999999999999986
No 46
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.9e-39 Score=319.79 Aligned_cols=359 Identities=14% Similarity=0.146 Sum_probs=282.5
Q ss_pred cccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEE
Q psy3710 46 RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIK 121 (424)
Q Consensus 46 ~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~ 121 (424)
....|.+.|.+++|+|+++++++++ .|+.|++||+.+++.+..+. |..+|.+++|+|++..+++ |+.|+
T Consensus 8 ~~~~h~~~v~~i~~sp~~~~la~~~-------~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 8 TFSNRSDRVKGIDFHPTEPWVLTTL-------YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEE-------TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEe-------CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3556889999999999999999988 57999999999999999988 8999999999999977765 89999
Q ss_pred EEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc-CCCEE
Q psy3710 122 VYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ-TGTRL 200 (424)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 200 (424)
+||+. +++.+..+..|.. .+.+++|+|++++|++ ++.||.|++||+.++......+.+|...|.+++|+| +++.+
T Consensus 81 vw~~~-~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 81 VFNYN-TGEKVVDFEAHPD--YIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEETT-TCCEEEEEECCSS--CEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred EEECC-CCcEEEEEecCCC--CEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 99996 7788888887764 4889999999999998 999999999999876456667889999999999999 88999
Q ss_pred EEEecCCcEEEEEECCCcceeeEEec----ceeeeeecC--CCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEE
Q psy3710 201 ATASYKGTLIRVFDTGSGQKLNELRR----GLCVLCPNS--NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSC 274 (424)
Q Consensus 201 ~~~~~d~~~i~iwd~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 274 (424)
++++.|+. |++||+.+++....+.. .+..++++| ++..++ +++.||.|++||+.+++ ....+.+|...|.+
T Consensus 157 ~~~~~dg~-v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~-~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 157 ASGCLDRT-VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI-TASDDLTIKIWDYQTKS-CVATLEGHMSNVSF 233 (814)
T ss_dssp EEEETTSE-EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE-EECTTSEEEEEETTTTE-EEEEEECCSSCEEE
T ss_pred EEEeCCCe-EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE-EEeCCCEEEEEECCCCc-EEEEEcCCCCCEEE
Confidence 99999999 99999998887777653 367788888 555554 59999999999998865 35667789999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee------------ccCCcE-EEEEeCCCcEEEEEccccccccccccc
Q psy3710 275 IALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL------------RRDSSY-LCVSSDHGTVHVFSVDEAQKINKQSSL 341 (424)
Q Consensus 275 ~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~------------~~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~~~ 341 (424)
++|+|++++|++++.||. |++||+.+++.+..+ +|++.. +++++.++.+.+|++..+.......+.
T Consensus 234 ~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPV 312 (814)
T ss_dssp EEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSS
T ss_pred EEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCC
Confidence 999999999999999999 999999998877654 567663 344555778999998775443222211
Q ss_pred eeeeccCccc-----------cCCc----------eeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCccee
Q psy3710 342 ASASFLPKYF-----------SSSW----------SFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECW 400 (424)
Q Consensus 342 ~~~~~~~~~~-----------~~~~----------~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~ 400 (424)
.......... ...| .......+...+..++|+|+|++|++++ ||.+.+|++. .....
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~-~~~~~ 390 (814)
T 3mkq_A 313 GKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL-AWRNK 390 (814)
T ss_dssp SEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT-TTEEE
T ss_pred CCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECc-ccccc
Confidence 1111000000 0000 0111223445678999999999999888 8999999975 33333
Q ss_pred eeeehhhheecCCCceeeEEE
Q psy3710 401 RDVYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 401 ~~~~~~~~~~~~d~~~l~~~~ 421 (424)
.......+.++||+++|++++
T Consensus 391 ~~~~i~~~~~spdg~~la~~~ 411 (814)
T 3mkq_A 391 AFGKCQDFVWGPDSNSYALID 411 (814)
T ss_dssp EEEECSEEEECTTSSCEEEEC
T ss_pred CCCceEEEEEeCCCCeEEEEe
Confidence 345566788899999888774
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=288.07 Aligned_cols=288 Identities=13% Similarity=0.136 Sum_probs=222.9
Q ss_pred cEEEEEe-ecC-CeEEEEecCCceEEEe---eccEEEEeecCCCceeE-EEeeCCCCCeeEEEeecCCCCeEEEeeccCC
Q psy3710 91 QVVICLE-FNA-PVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLH-VFETNPNPKGLCVLCPNSNNSLLAFPGRKSG 164 (424)
Q Consensus 91 ~~~~~~~-~~~-~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg 164 (424)
+.+.++. |.. .|.+++|+|++.++++ |+.|++|++. ...... ......+...+.+++|+|++++|++ |+.|+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s-~s~D~ 83 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTE-GDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS-ASFDA 83 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEE-TTEEEEEEEECSSCSSCEEEEEECTTSSEEEE-EETTS
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcC-CCcceeeeeeccccCCcEEEEEECCCCCEEEE-EECCC
Confidence 3455565 666 8999999999988876 8999999997 443322 2211223355899999999999998 99999
Q ss_pred eEEEEeCCCCC-CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce---eeEEecc---eeeeeecCCC
Q psy3710 165 HVHLVDLADPE-RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK---LNELRRG---LCVLCPNSNN 237 (424)
Q Consensus 165 ~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~---~~~~~~~---~~~~~~~~~~ 237 (424)
.+++||+.... .....+.+|...|.+++|+|++++|++++.|+. |++||++++.. +..+..+ +..++++|++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS-VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe-EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999988642 235678899999999999999999999999999 99999987643 3444433 7788999998
Q ss_pred CeEEEEeecCCeEEEEeCCCCCC-CCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCC--------------
Q psy3710 238 SLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG-------------- 302 (424)
Q Consensus 238 ~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~-------------- 302 (424)
..++ +++.|+.|++||.+.+.. ....+.+|...|++++|+|++++|++++.|++ |++|+....
T Consensus 163 ~~l~-s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 163 ELLA-SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp SCEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---CE
T ss_pred CEEE-EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCCc
Confidence 7665 499999999999987642 23567799999999999999999999999999 999996321
Q ss_pred -cee-------------eeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCce
Q psy3710 303 -QKL-------------NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPC 368 (424)
Q Consensus 303 -~~~-------------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (424)
+++ ..|+|++..|++++.|+.|++|+...+........ . ........|...|.
T Consensus 241 ~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-~------------~~~~~~~~h~~~V~ 307 (345)
T 3fm0_A 241 WKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF-S------------LTAHLHQAHSQDVN 307 (345)
T ss_dssp EEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE-E------------EEEEETTSSSSCEE
T ss_pred cceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE-E------------EEeeecccccCcEe
Confidence 111 13568899999999999999999876542211000 0 00011235778899
Q ss_pred EEEEecCC-CeEEEEeccCcEEEEEecCC
Q psy3710 369 ICAFGADS-NSIIVICADGSYYKFMFNSK 396 (424)
Q Consensus 369 ~~~~s~~~-~~l~~~~~dg~v~~~~~~~~ 396 (424)
.++|+|++ .+|++|+.||.|++|++...
T Consensus 308 ~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 308 CVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred EeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 99999988 48999999999999999743
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-40 Score=302.51 Aligned_cols=305 Identities=10% Similarity=0.076 Sum_probs=250.4
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
..+++++|+|+|++|++|+.++ |++||+.+.+.......+ ..+....++++++++++++ .|+.|++||+.+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~ 128 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGT-------TEGDIKVLDSNF 128 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEE-------TTSCEEEECTTS
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEE-------CCCCEEEEeCCC
Confidence 3455789999999999998888 999999887775544443 4445557789999999888 589999999999
Q ss_pred CcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCe
Q psy3710 90 KQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGH 165 (424)
Q Consensus 90 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~ 165 (424)
++....+. |...|.+++|+|++.++++ |+.|++||+. .++.+..+..|... +.+++|+|++++|++ ++.||.
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s-~~~d~~ 204 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK-DGSNPRTLIGHRAT--VTDIAIIDRGRNVLS-ASLDGT 204 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCCCEEEECCSSC--EEEEEEETTTTEEEE-EETTSC
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC-CCcCceEEcCCCCc--EEEEEEcCCCCEEEE-EcCCCc
Confidence 98888775 8999999999999977765 8999999997 77778888877644 889999999999998 999999
Q ss_pred EEEEeCCCCCCCCccccc---cc---------------------CCeEEEEEccCCCEEEEEecCCcEEEEEECCCccee
Q psy3710 166 VHLVDLADPERPPLDIAA---HE---------------------APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 221 (424)
Q Consensus 166 i~i~d~~~~~~~~~~~~~---~~---------------------~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 221 (424)
|++||++++ +....+.. |. ..+.+++|+|++++|++++.|+. |++||+++++..
T Consensus 205 v~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~ 282 (420)
T 3vl1_A 205 IRLWECGTG-TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQT 282 (420)
T ss_dssp EEEEETTTT-EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEE
T ss_pred EEEeECCCC-ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCcee
Confidence 999999976 45555543 33 44555556789999999999999 999999999888
Q ss_pred eEEec----ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy3710 222 NELRR----GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASYKGTLIRV 296 (424)
Q Consensus 222 ~~~~~----~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~~i~i 296 (424)
..+.. .+..++++|++..++++|+.||.|++||+++++.+...+.. |...|.++.+ +++++|++++.|+. |++
T Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~-v~i 360 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTS-IKL 360 (420)
T ss_dssp EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEE-EEE
T ss_pred EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCcc-EEE
Confidence 77754 37889999999977777999999999999998776666666 6778888855 57889999999999 999
Q ss_pred EECCCCcee---------------------eeeccCCc---EEEEEeCCCcEEEEEccc
Q psy3710 297 FDTGSGQKL---------------------NELRRDSS---YLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 297 wd~~~~~~~---------------------~~~~~~~~---~l~~~~~d~~i~iw~~~~ 331 (424)
|++...... ..|+|+++ .+++.+.+|.+.+|++++
T Consensus 361 w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 361 DIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 998763211 13668888 788888899999999875
No 49
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.5e-39 Score=295.55 Aligned_cols=311 Identities=16% Similarity=0.225 Sum_probs=245.0
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
.+.+|.+.|.. +++++|++|++|+.++ |++||+.+++.......|.+.|.++.+. ++.+++++ .|++|+
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~-------~dg~i~ 182 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS-------TDRTLK 182 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEE-------TTSCEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEe-------CCCeEE
Confidence 47789987643 3556789999999999 9999999998877777889999888886 66787777 589999
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR 161 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (424)
+||+.+++.+..+. |...|.++.++++..+.++ |+.|++||+. +++.+..+..|..+ +.++.+ ++..+++ |+
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~~~--v~~~~~--~~~~l~~-~~ 256 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE-TGQCLHVLMGHVAA--VRCVQY--DGRRVVS-GA 256 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESS-SCCEEEEEECCSSC--EEEEEE--CSSCEEE-EE
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECC-CCcEEEEEcCCccc--EEEEEE--CCCEEEE-Ec
Confidence 99999999999888 8899999999877655555 8999999996 77788888877654 667777 6788887 99
Q ss_pred cCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEE
Q psy3710 162 KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLA 241 (424)
Q Consensus 162 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (424)
.||.|++||++++ ..+..+.+|...|.+++| ++.++++++.|+. |++||+++++.+..+.
T Consensus 257 ~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~---------------- 316 (445)
T 2ovr_B 257 YDFMVKVWDPETE-TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLT---------------- 316 (445)
T ss_dssp TTSCEEEEEGGGT-EEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEEC----------------
T ss_pred CCCEEEEEECCCC-cEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEc----------------
Confidence 9999999999886 677788899999999999 7889999999999 9999999887766554
Q ss_pred EEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec------------
Q psy3710 242 FPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR------------ 309 (424)
Q Consensus 242 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~------------ 309 (424)
+|...+.++.++ ++++++++.|+. |++||+++++.+..+.
T Consensus 317 -------------------------~~~~~v~~~~~~--~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~ 368 (445)
T 2ovr_B 317 -------------------------GHQSLTSGMELK--DNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCL 368 (445)
T ss_dssp -------------------------CCCSCEEEEEEE--TTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEE
T ss_pred -------------------------CCcccEEEEEEe--CCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEE
Confidence 455556655553 457777777777 7777776666655543
Q ss_pred -cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCc-
Q psy3710 310 -RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGS- 387 (424)
Q Consensus 310 -~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~- 387 (424)
.+++++++++.||.|++||+.+++.+....... ...+.+.+..++|+|++.+|++|+.||+
T Consensus 369 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 369 QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE-----------------SGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EECSSEEEEEETTSEEEEEETTTCCEEEEEEECT-----------------TGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EECCCEEEEEeCCCeEEEEECCCCceeeeeeccc-----------------cCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 245677777778888888877766543321100 0124567889999999999999999998
Q ss_pred ---EEEEEecCC
Q psy3710 388 ---YYKFMFNSK 396 (424)
Q Consensus 388 ---v~~~~~~~~ 396 (424)
+.+||+..+
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 999999744
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.2e-39 Score=284.01 Aligned_cols=309 Identities=11% Similarity=0.105 Sum_probs=252.0
Q ss_pred cCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeec
Q psy3710 50 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFI 126 (424)
Q Consensus 50 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~ 126 (424)
+.+.+..++++|+++.+++... ++.+..|+... .+.+..+.|...|.+++|+|++.++++ ++.|++|++.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~ 80 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFP-------PDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDIS 80 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCC-------TTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETT
T ss_pred cCCceeEEEECCCCCEEEeecC-------CCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECC
Confidence 4567889999999999987763 34555554433 344455568999999999999987776 9999999996
Q ss_pred CCC--ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEE
Q psy3710 127 QCP--QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATA 203 (424)
Q Consensus 127 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 203 (424)
... .....+....+...+.+++|+|+++++++ ++.||.|++||+.++.. ....+..|...|.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 159 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIV-GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEE-EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEE-EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEE
Confidence 322 23444443344566999999999999998 99999999999998621 345677899999999999999999999
Q ss_pred ecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCC
Q psy3710 204 SYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 280 (424)
Q Consensus 204 ~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 280 (424)
+.|+. |++||+++++.+..+..+ +..++++|++..++. ++.||.|++||+++++.. .. ..+...+.+++|+|+
T Consensus 160 ~~dg~-v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~~~d~~~~~~~-~~-~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 160 CSDGN-IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT-GGLDNTVRSWDLREGRQL-QQ-HDFTSQIFSLGYCPT 235 (337)
T ss_dssp ETTSC-EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEEE-EE-EECSSCEEEEEECTT
T ss_pred eCCCc-EEEEeCCCCceeeeeecccCceEEEEECCCCCEEEE-EecCCcEEEEECCCCceE-ee-ecCCCceEEEEECCC
Confidence 99999 999999999988888654 778899998876665 889999999999986632 22 257889999999999
Q ss_pred CCEEEEEeCCCcEEEEEECCCCceee-----------eeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCc
Q psy3710 281 GTRLATASYKGTLIRVFDTGSGQKLN-----------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPK 349 (424)
Q Consensus 281 ~~~l~~~~~d~~~i~iwd~~~~~~~~-----------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 349 (424)
+++|++++.++. |++||+++++... .|+|++++|++++.||.|++||+.+++.+.
T Consensus 236 ~~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~------------- 301 (337)
T 1gxr_A 236 GEWLAVGMESSN-VEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF------------- 301 (337)
T ss_dssp SSEEEEEETTSC-EEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-------------
T ss_pred CCEEEEEcCCCc-EEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE-------------
Confidence 999999999999 9999999876543 367899999999999999999999876531
Q ss_pred cccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 350 YFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
...+...+..++|+|++++|++++.||.|++|++.
T Consensus 302 ----------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 302 ----------QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ----------EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ----------EecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 12245678899999999999999999999999973
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.4e-39 Score=309.25 Aligned_cols=301 Identities=13% Similarity=0.135 Sum_probs=234.4
Q ss_pred cccccCCceEEEEECCCC-CeeEeecCCe-EEEEeCCcCcc-----cccccccCCCeeeEEEeccCceEEEEeCCcCCCc
Q psy3710 5 TSSTYKNGLLYAGFNQDQ-GCFACGMEDG-FRIYNCDPLKE-----KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g-~~la~g~~~~-i~iw~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 77 (424)
.+.+|.+.|++++|+|++ ++|++|+.|+ |++|++.+... ......|.+.|.+++|+++++++++++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs------- 449 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS------- 449 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE-------
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe-------
Confidence 478999999999999875 7899999988 99999876433 233556899999999999999999988
Q ss_pred CCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEee--CCCCCeeEEEeecC
Q psy3710 78 PNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFET--NPNPKGLCVLCPNS 151 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 151 (424)
.|++|++||+.+++.+..+. |...|.+++|+|++..+++ |+.|++||.. .. ....+.. ..+...+.+++|+|
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~-~~-~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GE-CKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SC-EEEEECSSTTSCSSCEEEEEECS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC-CC-cceeeccCCCCCCCcEEEEEEeC
Confidence 68999999999999998887 8999999999999977665 8999999975 22 2222211 22334588899999
Q ss_pred CC--CeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEeccee
Q psy3710 152 NN--SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLC 229 (424)
Q Consensus 152 ~~--~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~ 229 (424)
++ ..+++ |+.|+.|++||+++. +....+.+|.+.|.+++|+|++++|++++.|+. |++||+++++.+..+
T Consensus 528 ~~~~~~l~s-~s~d~~v~vwd~~~~-~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~----- 599 (694)
T 3dm0_A 528 NTLQPTIVS-ASWDKTVKVWNLSNC-KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSL----- 599 (694)
T ss_dssp CSSSCEEEE-EETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECC-----
T ss_pred CCCcceEEE-EeCCCeEEEEECCCC-cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEe-----
Confidence 87 45776 999999999999986 667788899999999999999999999999999 999999887654332
Q ss_pred eeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 230 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
.+...|.+++|+|++.+|++++ ++. |++||+++++.+..+.
T Consensus 600 -------------------------------------~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 600 -------------------------------------EANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLK 640 (694)
T ss_dssp -------------------------------------BCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEEC
T ss_pred -------------------------------------cCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhc
Confidence 2345689999999998877765 555 9999999998887776
Q ss_pred cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEE
Q psy3710 310 RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYY 389 (424)
Q Consensus 310 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~ 389 (424)
.+.......... .+.. ....+.-.++.++|+|||++|++|+.||.|+
T Consensus 641 ~~~~~~~~~~~~---------~~~~------------------------~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 641 VDLKAEAEKADN---------SGPA------------------------ATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp CCCC-------------------------------------------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cccccccccccc---------cccc------------------------cCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 543221100000 0000 0000112356889999999999999999999
Q ss_pred EEEec
Q psy3710 390 KFMFN 394 (424)
Q Consensus 390 ~~~~~ 394 (424)
+|++.
T Consensus 688 iW~i~ 692 (694)
T 3dm0_A 688 VWGIG 692 (694)
T ss_dssp EEEC-
T ss_pred EEecc
Confidence 99985
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-40 Score=299.73 Aligned_cols=286 Identities=13% Similarity=0.110 Sum_probs=220.8
Q ss_pred ccccCCceEEEEECCC-CCeeEeecCCe-EEEEeCCcCcccc--cccccCCCeeeEEEec-cCceEEEEeCCcCCCcCCC
Q psy3710 6 SSTYKNGLLYAGFNQD-QGCFACGMEDG-FRIYNCDPLKEKE--RQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNN 80 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~-g~~la~g~~~~-i~iw~~~~~~~~~--~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~~~~d~ 80 (424)
..+|...|+|++|+|. +.+||+|+.+| |+|||+.+.+... ....|.+.|.+++|+| ++++|++++ .|+
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------~D~ 187 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------MEG 187 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-------SSS
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-------CCC
Confidence 4578999999999994 67899999999 9999998776533 3445899999999998 577888777 589
Q ss_pred eEEEEECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCC
Q psy3710 81 RVMIWDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNS 154 (424)
Q Consensus 81 ~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (424)
+|++||++++....... +...+.+++|+|++.++++ |+.|++||++ ++.+..+..|.. .+.+++|+|++.
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~~~~h~~--~v~~v~~~p~~~ 263 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWNLRMHKK--KVTHVALNPCCD 263 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCCSBCCSS--CEEEEEECTTCS
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEEEecccc--eEEeeeecCCCc
Confidence 99999997655443333 2346789999999987776 8999999985 455666777764 488999999988
Q ss_pred eEEEeeccCCeEEEEeCCCCCC--CCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc-----
Q psy3710 155 LLAFPGRKSGHVHLVDLADPER--PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG----- 227 (424)
Q Consensus 155 ~l~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~----- 227 (424)
.++++|+.|+.|++||+++... ......+|...|.+++|+|+|++|++++.|+. |++||+++++....+..+
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~ 342 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHF 342 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCC
T ss_pred eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEeccccccc
Confidence 6555599999999999987532 22344689999999999999999999999999 999999998877665432
Q ss_pred ----eeeeeecCCCCeEEEE-----------eecCCeEEEEeCCCCCCCCeeeccCCCCeEEE-EEcCCCCEEEEEeCCC
Q psy3710 228 ----LCVLCPNSNNSLLAFP-----------GRKSGHVHLVDLADPERPPLDIAAHEAPLSCI-ALNQTGTRLATASYKG 291 (424)
Q Consensus 228 ----~~~~~~~~~~~~~~~~-----------~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~ 291 (424)
.....++|.+..++++ +..++.|++||..+++.......+|...|.++ +|+|+|++|++|+ |+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~ 421 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GY 421 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SS
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CC
Confidence 1123455555555443 33456899999998875444556788899887 6999999999876 77
Q ss_pred cEEEEEECCCCcee
Q psy3710 292 TLIRVFDTGSGQKL 305 (424)
Q Consensus 292 ~~i~iwd~~~~~~~ 305 (424)
. |+||++++++..
T Consensus 422 ~-i~iW~~~~gk~r 434 (435)
T 4e54_B 422 H-ILIWSQQEARTR 434 (435)
T ss_dssp E-EEECCCC-----
T ss_pred c-EEEEECCcCeee
Confidence 8 999999988754
No 53
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-40 Score=302.92 Aligned_cols=325 Identities=11% Similarity=0.066 Sum_probs=225.9
Q ss_pred ccCCceEEEEECCCC---------CeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcC
Q psy3710 8 TYKNGLLYAGFNQDQ---------GCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g---------~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 78 (424)
.+.+.|.+++|+|++ ++||+|+.+... . ..+|+++.+++++ .
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~----------------~------~~~~~~~~laS~s-------~ 181 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD----------------E------PLNEHLEMFDKEK-------H 181 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------------
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccC----------------C------ccchhhhhhccCC-------C
Confidence 367889999999987 788888755320 0 1246677776666 5
Q ss_pred CCeEEEEECCCCcEE----EEEe-ecCCeEEEEecCC------ceEEEe---eccEEEEeecCCCc----------eeEE
Q psy3710 79 NNRVMIWDDLKKQVV----ICLE-FNAPVKGVRLRRD------KIVVVL---EGLIKVYTFIQCPQ----------QLHV 134 (424)
Q Consensus 79 d~~i~iwd~~~~~~~----~~~~-~~~~v~~~~~~~~------~~~~~~---~~~i~v~~~~~~~~----------~~~~ 134 (424)
|++|+|||+.+++.. ..+. +.+.|.+++|+|+ +.++++ |++|++||+..... +...
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~ 261 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT 261 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence 899999999877642 3344 4688999999996 345664 89999999963211 1234
Q ss_pred EeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEE--EEccCC-CEEEEEecCCcEEE
Q psy3710 135 FETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCI--ALNQTG-TRLATASYKGTLIR 211 (424)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~~i~ 211 (424)
+..|. ..+.+++|++++ .|++ |+.||+|++||++++..+...+.+|...|.++ +|+|++ .+|++++.|++ |+
T Consensus 262 l~~h~--~~v~sv~~s~~~-~las-gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~t-vk 336 (524)
T 2j04_B 262 LSLAD--SLITTFDFLSPT-TVVC-GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGY-FY 336 (524)
T ss_dssp ECCTT--TCEEEEEESSSS-EEEE-EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSE-EE
T ss_pred EEcCC--CCEEEEEecCCC-eEEE-EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCe-EE
Confidence 55555 448889998864 6777 99999999999997645566788999999999 578887 89999999999 99
Q ss_pred EEECCCcceeeEEecc-----eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEE
Q psy3710 212 VFDTGSGQKLNELRRG-----LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLAT 286 (424)
Q Consensus 212 iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 286 (424)
+||++++++...+..+ +..++++|++..++ +++.|++|++||++++.. ...+.+|.+.|++++|+|+|++|++
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~-s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYI-YSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEE-EECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCCBCEE
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEE-EeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCCeEEE
Confidence 9999998776655433 45789999988754 588999999999998764 4566789999999999999999999
Q ss_pred EeCCCcEEEEEECCCCceeee-----------------eccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCc
Q psy3710 287 ASYKGTLIRVFDTGSGQKLNE-----------------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPK 349 (424)
Q Consensus 287 ~~~d~~~i~iwd~~~~~~~~~-----------------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 349 (424)
|+.|++ |++||+..+ .+.. |+|+++. +++|+... +....
T Consensus 415 gs~Dgt-v~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~---------~~~~~~~~---~~~~~---------- 470 (524)
T 2j04_B 415 GSADGS-LIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDK---------YRIDSSYE---VYPLT---------- 470 (524)
T ss_dssp EETTTE-EECCBSCSS-TTTCC------CCCCEEEECBCCSSSCE---------EEECCCCC---CCC------------
T ss_pred EECCCE-EEEEechHh-hccccccCccceeeeEEEEeccCCCCCe---------EEccCCce---ecccc----------
Confidence 999999 999998643 2211 2233331 22322100 00000
Q ss_pred cccCCceeeEEeecCCCceEEEEecCCC---eEEEEeccCcEEEEEec
Q psy3710 350 YFSSSWSFCKFQIPSDPPCICAFGADSN---SIIVICADGSYYKFMFN 394 (424)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~l~~~~~dg~v~~~~~~ 394 (424)
...-....+..|...|..++|+|+++ .|++|+.||.|+||++.
T Consensus 471 --~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 471 --VNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp -------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred --cCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 00011233556778899999999964 99999999999999986
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.2e-38 Score=278.06 Aligned_cols=302 Identities=11% Similarity=0.199 Sum_probs=227.9
Q ss_pred EeecCCe---EEEEeCCcC--cccccccccCCCeeeEEEecc-CceEEEEeCCcCCCcCCCeEEEEECCCCc-----EEE
Q psy3710 26 ACGMEDG---FRIYNCDPL--KEKERQDFTDGGLGHVEMLFR-CNYLALVGGGTHPKYPNNRVMIWDDLKKQ-----VVI 94 (424)
Q Consensus 26 a~g~~~~---i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~~~~~d~~i~iwd~~~~~-----~~~ 94 (424)
++|.+.| +.++...+. +....+..|.+.|.+++|+|+ +++|++++ .|++|+|||+.+++ ...
T Consensus 8 ~~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s-------~D~~i~vWd~~~~~~~~~~~~~ 80 (340)
T 4aow_A 8 SSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSAS-------RDKTIIMWKLTRDETNYGIPQR 80 (340)
T ss_dssp ------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEE-------TTSCEEEEEECCSSSCSEEEEE
T ss_pred ccccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEc-------CCCeEEEEECCCCCcccceeeE
Confidence 3444444 444444333 334446779999999999998 57888888 68999999987643 445
Q ss_pred EEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEe
Q psy3710 95 CLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVD 170 (424)
Q Consensus 95 ~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d 170 (424)
.+. |...|.+++|+|++.++++ |+.|++|+.. ..........+. .......+++++..+++ |+.|+.+++||
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~l~s-~s~d~~~~~~d 156 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-TGTTTRRFVGHT--KDVLSVAFSSDNRQIVS-GSRDKTIKLWN 156 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECCS--SCEEEEEECTTSSCEEE-EETTSCEEEEC
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec-ccceeeeecCCC--CceeEEEEeecCcccee-ecCCCeEEEEE
Confidence 555 7899999999999988776 8999999986 555555555544 33667788999999998 99999999999
Q ss_pred CCCCCCCCcccccccCCeEEEEEccCC--CEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCC
Q psy3710 171 LADPERPPLDIAAHEAPLSCIALNQTG--TRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSG 248 (424)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 248 (424)
+...........+|...+..++|++++ ..+++++.|+. |++||+++++.+..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~-i~i~d~~~~~~~~~~~----------------------- 212 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL-VKVWNLANCKLKTNHI----------------------- 212 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC-EEEEETTTTEEEEEEC-----------------------
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCE-EEEEECCCCceeeEec-----------------------
Confidence 987544455677899999999999865 57889999999 9999998877655443
Q ss_pred eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee-----------ccCCcEEEE
Q psy3710 249 HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL-----------RRDSSYLCV 317 (424)
Q Consensus 249 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~-----------~~~~~~l~~ 317 (424)
+|..+|++++|+|++++|++++.|+. |++||+++++.+..+ +|++ .+++
T Consensus 213 ------------------~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~ 272 (340)
T 4aow_A 213 ------------------GHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDGGDIINALCFSPNR-YWLC 272 (340)
T ss_dssp ------------------CCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECSSCEEEEEECSSS-SEEE
T ss_pred ------------------CCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecCCceEEeeecCCCC-ceee
Confidence 68889999999999999999999999 999999998887764 3454 4556
Q ss_pred EeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 318 SSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 318 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
++.|+.|++||++++..+....... .......|...|+.++|+||+++|++|+.||.|++|++..
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEV-------------ISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC--------------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ccCCCEEEEEECCCCeEEEeccccc-------------eeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 6779999999998876554332211 1112345678899999999999999999999999999973
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.9e-38 Score=278.23 Aligned_cols=282 Identities=12% Similarity=0.098 Sum_probs=219.0
Q ss_pred EEEEEe-ecCCeEEEEe-----cC-CceEEEe---eccEEEEeecCC------CceeEEEeeCCCCCeeEEEeecCCCCe
Q psy3710 92 VVICLE-FNAPVKGVRL-----RR-DKIVVVL---EGLIKVYTFIQC------PQQLHVFETNPNPKGLCVLCPNSNNSL 155 (424)
Q Consensus 92 ~~~~~~-~~~~v~~~~~-----~~-~~~~~~~---~~~i~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (424)
....+. |.+.|.+++| ++ ++.++++ |+.|++||+... +.....+.+|.. .+.+++++|++.+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~--~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH--FVSDLALSQENCF 90 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS--CEEEEEECSSTTE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC--ceEEEEECCCCCE
Confidence 344555 8999999999 66 7777765 899999999632 234455666664 4889999999999
Q ss_pred EEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe------ccee
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR------RGLC 229 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~------~~~~ 229 (424)
+++ |+.|+.|++||++++ +....+.+|...|.+++|+|++++|++++.|+. |++||+.... ..... ..+.
T Consensus 91 l~s-~s~D~~v~lwd~~~~-~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~-i~~wd~~~~~-~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 91 AIS-SSWDKTLRLWDLRTG-TTYKRFVGHQSEVYSVAFSPDNRQILSAGAERE-IKLWNILGEC-KFSSAEKENHSDWVS 166 (343)
T ss_dssp EEE-EETTSEEEEEETTSS-CEEEEEECCCSCEEEEEECSSTTEEEEEETTSC-EEEEESSSCE-EEECCTTTSCSSCEE
T ss_pred EEE-EcCCCcEEEEECCCC-cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCE-EEEEeccCCc-eeeeecccCCCceee
Confidence 998 999999999999986 677788999999999999999999999999999 9999997433 22222 2267
Q ss_pred eeeecCCCC---------eEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 230 VLCPNSNNS---------LLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 230 ~~~~~~~~~---------~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
.++++|.+. .++++++.|+.|++||... .....+.+|...|.+++|+|+|++|++++.|+. |++||+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~ 243 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDIL 243 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESS
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC--ceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECC
Confidence 788888763 4677799999999999432 234567789999999999999999999999999 9999994
Q ss_pred C-Cceee-----------eeccCCcEEEEEeCCCcEEEEEcccccccc--ccccceeeeccCccccCCceeeEEeecCCC
Q psy3710 301 S-GQKLN-----------ELRRDSSYLCVSSDHGTVHVFSVDEAQKIN--KQSSLASASFLPKYFSSSWSFCKFQIPSDP 366 (424)
Q Consensus 301 ~-~~~~~-----------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (424)
. ..... .|+|++.+++++ .|+.|++|++.+++... ..... +. ........|...
T Consensus 244 ~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~~~ 311 (343)
T 2xzm_R 244 NLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE------PI-----TKAEGQKGKNPQ 311 (343)
T ss_dssp CCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC------SG-----GGBTTBCCSCCC
T ss_pred CCcccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC------cc-----hhhhhhcCCCCc
Confidence 3 22222 367888877655 57889999998865433 11100 00 000112245677
Q ss_pred ceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 367 PCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 367 ~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+..++|+|+|++|++|+.||.|++|++.
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 8999999999999999999999999986
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8e-38 Score=288.27 Aligned_cols=305 Identities=16% Similarity=0.242 Sum_probs=230.0
Q ss_pred cccccCCce-EEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 5 TSSTYKNGL-LYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 5 ~l~~h~~~V-~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.+.+|.+.| .++.| ++++|++|+.++ |++||+.+++.......|.+.|.+++|++++ .+++++ .|++|
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s-------~dg~i 185 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS-------TDRTV 185 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-------TTSCE
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-------CCCCE
Confidence 478898885 66555 567999999998 9999999998887778899999999999887 677666 58999
Q ss_pred EEEECCCCcEEEEEe-ecCCeEEEEec--CCceEEEe---eccEEEEeecCCCce-----------------------eE
Q psy3710 83 MIWDDLKKQVVICLE-FNAPVKGVRLR--RDKIVVVL---EGLIKVYTFIQCPQQ-----------------------LH 133 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~-~~~~v~~~~~~--~~~~~~~~---~~~i~v~~~~~~~~~-----------------------~~ 133 (424)
++||+++++.+..+. |...|.+++|+ +++.++++ |+.|++||+. .... ..
T Consensus 186 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 186 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP-KESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC-CCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC-CCcccccccccCCcceEeeccCCCeEEEE
Confidence 999999999999988 89999999998 56666654 8999999996 3322 33
Q ss_pred EEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEE
Q psy3710 134 VFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVF 213 (424)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iw 213 (424)
.+..|. ..+.++ ++++.++++ |+.||.|++||+.++ +.+..+.+|...|.+++|+|+++++++++.|+. |++|
T Consensus 265 ~~~~~~--~~v~~~--~~~~~~l~~-~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vw 337 (464)
T 3v7d_B 265 VLRGHM--ASVRTV--SGHGNIVVS-GSYDNTLIVWDVAQM-KCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIW 337 (464)
T ss_dssp EECCCS--SCEEEE--EEETTEEEE-EETTSCEEEEETTTT-EEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEE
T ss_pred EccCcc--ceEEEE--cCCCCEEEE-EeCCCeEEEEECCCC-cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEE
Confidence 344444 335444 567888988 999999999999986 677788899999999999999999999999999 9999
Q ss_pred ECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy3710 214 DTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTL 293 (424)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~ 293 (424)
|+++++++..+. +|...|.+++|+ +++|++++.|+.
T Consensus 338 d~~~~~~~~~~~-----------------------------------------~h~~~v~~~~~~--~~~l~s~s~dg~- 373 (464)
T 3v7d_B 338 DLENGELMYTLQ-----------------------------------------GHTALVGLLRLS--DKFLVSAAADGS- 373 (464)
T ss_dssp ETTTTEEEEEEC-----------------------------------------CCSSCEEEEEEC--SSEEEEEETTSE-
T ss_pred ECCCCcEEEEEe-----------------------------------------CCCCcEEEEEEc--CCEEEEEeCCCc-
Confidence 999888766654 456666666665 356667777776
Q ss_pred EEEEECCCCceeee-----------eccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEee
Q psy3710 294 IRVFDTGSGQKLNE-----------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQI 362 (424)
Q Consensus 294 i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (424)
|++||+.+++.... ++++++++++++ ||.|++||+.+++.+..... .
T Consensus 374 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~---------------------~ 431 (464)
T 3v7d_B 374 IRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANIL---------------------K 431 (464)
T ss_dssp EEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTT---------------------T
T ss_pred EEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhc---------------------c
Confidence 77777666544332 345666777766 67777777777665432111 1
Q ss_pred cCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 363 PSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 363 ~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+.+.+..++|+ +...+++++.||.+.+|-++
T Consensus 432 ~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 432 DADQIWSVNFK-GKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEEec-CCEEEEEEEeCCeEEEEEee
Confidence 23456788886 33445555667766666543
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.2e-39 Score=286.23 Aligned_cols=321 Identities=13% Similarity=0.098 Sum_probs=240.4
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCc--ccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLK--EKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
+..|.++|++++|+|++++|++|+.++ |++||+++++ .......|.+.|.+++|+|+++++++++ .|+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-------~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-------TDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-------TTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-------CCCeE
Confidence 345999999999999999999998888 9999998886 5555667899999999999999999888 58999
Q ss_pred EEEECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEeecCCCce---eEEEeeCCCCCeeEEEeecCCC
Q psy3710 83 MIWDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQ---LHVFETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 153 (424)
++||+++++....+. |...|.+++|+|++.++++ ++.|++||+. .... ...+. ..+...+.+++|+|++
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~-~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE-QENDWWVCKHIK-KPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE-TTTTEEEEEEEC-TTCCSCEEEEEECTTS
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEec-CCCcceeeeeee-cccCCCeeEEEEcCCC
Confidence 999998887665543 7889999999999977765 8999999997 4332 22221 2234568999999999
Q ss_pred CeEEEeeccCCeEEEEeCCC-----------------CCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECC
Q psy3710 154 SLLAFPGRKSGHVHLVDLAD-----------------PERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 216 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 216 (424)
+++++ |+.||.|++||++. .......+..|...|.+++|+|++++|++++.|+. |++||++
T Consensus 155 ~~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~ 232 (372)
T 1k8k_C 155 VLLAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADAD 232 (372)
T ss_dssp SEEEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGG
T ss_pred CEEEE-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECC
Confidence 99998 99999999999642 12455667789999999999999999999999999 9999998
Q ss_pred CcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy3710 217 SGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRV 296 (424)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~i 296 (424)
+++.+..+. .|..+|.+++|+|++++|+++ .|+. |++
T Consensus 233 ~~~~~~~~~-----------------------------------------~~~~~v~~~~~~~~~~~l~~~-~d~~-i~i 269 (372)
T 1k8k_C 233 KKMAVATLA-----------------------------------------SETLPLLAVTFITESSLVAAG-HDCF-PVL 269 (372)
T ss_dssp GTTEEEEEE-----------------------------------------CSSCCEEEEEEEETTEEEEEE-TTSS-CEE
T ss_pred CCceeEEEc-----------------------------------------cCCCCeEEEEEecCCCEEEEE-eCCe-EEE
Confidence 877655543 577789999999999988887 8898 999
Q ss_pred EECCC--Cc--eeeeeccCCcEEEEEeCCCcEEEE---EccccccccccccceeeeccCccccCCceeeEEeecCCCceE
Q psy3710 297 FDTGS--GQ--KLNELRRDSSYLCVSSDHGTVHVF---SVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCI 369 (424)
Q Consensus 297 wd~~~--~~--~~~~~~~~~~~l~~~~~d~~i~iw---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
|++.+ ++ .+..+..... ........+++| +... +.... |... ......|.++|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~-----~~~~~~h~~~v~~ 331 (372)
T 1k8k_C 270 FTYDSAAGKLSFGGRLDVPKQ--SSQRGLTARERFQNLDKKA-SSEGS----------AAAG-----AGLDSLHKNSVSQ 331 (372)
T ss_dssp EEEETTTTEEEECCCCCCC----------CHHHHHHHCCCCC-------------------------CCCSSSSSSCEEE
T ss_pred EEccCcCceEEEeeccCcccc--chhhhcchhhhhhhccccc-ccccC----------cccc-----ccccccccCCcce
Confidence 99987 53 2222222111 112223334444 2111 10000 0000 0001256788999
Q ss_pred EEEe-cCC---CeEEEEeccCcEEEEEecCCcc
Q psy3710 370 CAFG-ADS---NSIIVICADGSYYKFMFNSKGE 398 (424)
Q Consensus 370 ~~~s-~~~---~~l~~~~~dg~v~~~~~~~~~~ 398 (424)
++|. ++| ++|++++.||.|++|++....+
T Consensus 332 ~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 332 ISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp EEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred eEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 9866 676 9999999999999999974333
No 58
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-38 Score=287.70 Aligned_cols=281 Identities=16% Similarity=0.239 Sum_probs=232.5
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCc------ccccccccCCCeeeEEEecc----C---ceEEEEe
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLK------EKERQDFTDGGLGHVEMLFR----C---NYLALVG 70 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~------~~~~~~~~~~~i~~~~~~~~----~---~~l~~~~ 70 (424)
.+.+|.+.|++++|+| ++|++|+.++ |++|++.+.+ .......|...|.+++|+++ + +++++++
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 4789999999999999 7999998888 9999999887 45555668899999999999 8 8888888
Q ss_pred CCcCCCcCCCeEEEEECCCCcE-----EEEEe-e-----cCCeEEEEec----CCceE-EEe---eccEEEEeecCC---
Q psy3710 71 GGTHPKYPNNRVMIWDDLKKQV-----VICLE-F-----NAPVKGVRLR----RDKIV-VVL---EGLIKVYTFIQC--- 128 (424)
Q Consensus 71 ~~~~~~~~d~~i~iwd~~~~~~-----~~~~~-~-----~~~v~~~~~~----~~~~~-~~~---~~~i~v~~~~~~--- 128 (424)
.|+.|++||+.+++. ...+. + ...|.+++|+ |++.. +++ ++.|++||+. .
T Consensus 89 -------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~ 160 (397)
T 1sq9_A 89 -------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH-PFAD 160 (397)
T ss_dssp -------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE-SSSS
T ss_pred -------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCC-cccc
Confidence 589999999988886 66666 5 4899999999 98876 664 8999999997 4
Q ss_pred ---CceeE-----EEee-----CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccc---c---cCCeE
Q psy3710 129 ---PQQLH-----VFET-----NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA---H---EAPLS 189 (424)
Q Consensus 129 ---~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~---~---~~~v~ 189 (424)
.+.+. .+.. ..+...+.+++++|++ .+++ ++.||.|++||++++ +.+..+.. | ...|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~dg~i~i~d~~~~-~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIAT-GFNNGTVQISELSTL-RPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-ECTTSEEEEEETTTT-EEEEEEECCC---CCCCCEE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEE-EeCCCcEEEEECCCC-ceeEEEeccccccccCCccc
Confidence 44444 5644 3334558889999999 8887 999999999999986 67777777 8 99999
Q ss_pred EEEEccCCCEEEEEecC---CcEEEEEECCCcceeeEEec-------------c---eeeeeecCCCCeEEEEeecCCeE
Q psy3710 190 CIALNQTGTRLATASYK---GTLIRVFDTGSGQKLNELRR-------------G---LCVLCPNSNNSLLAFPGRKSGHV 250 (424)
Q Consensus 190 ~~~~~~~~~~l~~~~~d---~~~i~iwd~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~dg~i 250 (424)
+++|+|++++|++++.| +. |++||+++++.+..+.. + +..++++|++..++. ++.||.|
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i 315 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-AGWDGKL 315 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE-EETTSEE
T ss_pred eEEECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE-EeCCCeE
Confidence 99999999999999999 99 99999999998888875 3 678899998886655 8899999
Q ss_pred EEEeCCCCCCCCeeec------cC---------------CCCeEEEEEcCCC----------CEEEEEeCCCcEEEEEEC
Q psy3710 251 HLVDLADPERPPLDIA------AH---------------EAPLSCIALNQTG----------TRLATASYKGTLIRVFDT 299 (424)
Q Consensus 251 ~i~d~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~~~~~d~~~i~iwd~ 299 (424)
++||+++++ ....+. .| ...|++++|+|++ ++|++++.|+. |++|++
T Consensus 316 ~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~-i~iw~~ 393 (397)
T 1sq9_A 316 RFWDVKTKE-RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS-IRWFRE 393 (397)
T ss_dssp EEEETTTTE-EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE-EEEEEE
T ss_pred EEEEcCCCc-eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc-EEEEEc
Confidence 999998875 345555 66 9999999999998 67888888887 888887
Q ss_pred CCC
Q psy3710 300 GSG 302 (424)
Q Consensus 300 ~~~ 302 (424)
++|
T Consensus 394 ~~g 396 (397)
T 1sq9_A 394 AGG 396 (397)
T ss_dssp EC-
T ss_pred CCC
Confidence 665
No 59
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-38 Score=276.59 Aligned_cols=279 Identities=11% Similarity=0.089 Sum_probs=207.1
Q ss_pred ccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC--cEEEEE--e-ecCCeEEEEecCCceEEEe-
Q psy3710 43 EKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK--QVVICL--E-FNAPVKGVRLRRDKIVVVL- 116 (424)
Q Consensus 43 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~--~~~~~~--~-~~~~v~~~~~~~~~~~~~~- 116 (424)
.......|.+.|.+++|+++ ++++++ .|++|++||+.++ +....+ . |...|.+++|+|++.++++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~-------~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~ 76 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGS-------TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAG 76 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEE-------SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEc-------CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEE
Confidence 34445678999999999877 777777 5899999999875 344555 2 7889999999999987776
Q ss_pred --eccEEEEeecC------CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCC---CCCccccccc
Q psy3710 117 --EGLIKVYTFIQ------CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE---RPPLDIAAHE 185 (424)
Q Consensus 117 --~~~i~v~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~ 185 (424)
|+.|++|++.. ..+.+..+..|.. .+.+++|+|++++|++ |+.|+.|++||++... +.+..+.+|.
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~--~V~~v~~sp~g~~las-~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHEN--EVKGVAWSNDGYYLAT-CSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC------CEEEEEECTTSCEEEE-EETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCCC--cEEEEEECCCCCEEEE-EeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 89999999842 1244556677764 4889999999999998 9999999999995432 2345678999
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeee
Q psy3710 186 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI 265 (424)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~ 265 (424)
..|.+++|+|++++|++++.|+. |++||..++... ....+
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~-i~iW~~~~~~~~---------------------------------------~~~~~ 193 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDT-VRIWKDYDDDWE---------------------------------------CVAVL 193 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSC-EEEEEEETTEEE---------------------------------------EEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCe-EEEEECCCCCee---------------------------------------EEEEc
Confidence 99999999999999999999999 999997654210 01223
Q ss_pred ccCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEEECCCC--------ceeee-------------eccCCcEEEEEeCCC
Q psy3710 266 AAHEAPLSCIALNQT--GTRLATASYKGTLIRVFDTGSG--------QKLNE-------------LRRDSSYLCVSSDHG 322 (424)
Q Consensus 266 ~~~~~~v~~~~~~~~--~~~l~~~~~d~~~i~iwd~~~~--------~~~~~-------------~~~~~~~l~~~~~d~ 322 (424)
.+|...|.+++|+|+ +.+|++++.|++ |++||+.++ .+... |++ +.+|++++.||
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~l~s~~~dg 271 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NGLIASVGADG 271 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TSCEEEEETTS
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccccceeEEeeecccccccceEEEEEcC-CCEEEEEeCCC
Confidence 378888999999998 678899999999 999988653 22222 233 44899999999
Q ss_pred cEEEEEccccccccccccceeeeccCccccCCceeeEEeecCC-CceEEEEec--CCCeEEEEeccCcEEEEEec
Q psy3710 323 TVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSD-PPCICAFGA--DSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~--~~~~l~~~~~dg~v~~~~~~ 394 (424)
.|++|+..+++.... ......|.. .+..++|+| ++++|++|+.||+|++|++.
T Consensus 272 ~v~iw~~~~~~~~~~-------------------~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 272 VLAVYEEVDGEWKVF-------------------AKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp CEEEEEEETTEEEEE-------------------EEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEEEEEcCCCceEEE-------------------eccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 999999876531000 000112444 688999999 78999999999999999986
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.6e-38 Score=283.18 Aligned_cols=277 Identities=14% Similarity=0.141 Sum_probs=225.7
Q ss_pred cccccCCceEEEEECCCC-CeeEeecCCe-EEEEeCCcCccccccc--ccCCCeeeEEEec-cCceEEEEeCCcCCCcCC
Q psy3710 5 TSSTYKNGLLYAGFNQDQ-GCFACGMEDG-FRIYNCDPLKEKERQD--FTDGGLGHVEMLF-RCNYLALVGGGTHPKYPN 79 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g-~~la~g~~~~-i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~~~~~~~~d 79 (424)
.+.+|.+.|++++|+|++ ++|++|+.++ |+|||+.+.+...... .|.+.|.+++|+| +++.+++++ .|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d 140 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-------IR 140 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------TT
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------CC
Confidence 467999999999999999 9999999888 9999999877755444 4889999999999 678888887 58
Q ss_pred CeEEEEECCCCcEEEEEe-e---cCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC
Q psy3710 80 NRVMIWDDLKKQVVICLE-F---NAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~-~---~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
+.|++||+.+ ..+..+. + ...|.+++|+|++..+++ |+.|++||+ .++.+..+..|.. .+.+++|+|+
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~h~~--~v~~~~~~~~ 215 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL--DGHEIFKEKLHKA--KVTHAEFNPR 215 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET--TSCEEEEEECSSS--CEEEEEECSS
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC--CCCEEEEeccCCC--cEEEEEECCC
Confidence 9999999985 5555554 3 377999999999987776 899999998 4667778887764 4889999999
Q ss_pred CC-eEEEeeccCCeEEEEeCCCCCC--CCcccccccCCeEEEEEcc-CCCEEEEEecCCcEEEEEECCCcceeeEEecc-
Q psy3710 153 NS-LLAFPGRKSGHVHLVDLADPER--PPLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTGSGQKLNELRRG- 227 (424)
Q Consensus 153 ~~-~l~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~- 227 (424)
++ ++++ |+.|+.|++||+++... ......+|...|.+++|+| ++++|++++.|+. |++||+++++....+..+
T Consensus 216 ~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 216 CDWLMAT-SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp CTTEEEE-EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECC
T ss_pred CCCEEEE-EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCcccccccccc
Confidence 99 6776 99999999999987421 1222337999999999999 9999999999999 999999998876666532
Q ss_pred -------------------eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc--CCCCeEEEEEcCCCCEEEE
Q psy3710 228 -------------------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLAT 286 (424)
Q Consensus 228 -------------------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~ 286 (424)
...++++|++.. +++.|+.|++||+.+++. ...+.+ |...+..++|+|++++|++
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~-~~~l~~~~~~~~~~~~~~s~~g~~l~s 369 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSPTGDVLAS 369 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE-EEEECBTTBCSCCCEEEECTTSSEEEE
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce-eeeecCCCCCceEEEEEEecCccEEEE
Confidence 122445555555 577999999999998764 445544 5677888899999999999
Q ss_pred EeCCCcEEEEEECCC
Q psy3710 287 ASYKGTLIRVFDTGS 301 (424)
Q Consensus 287 ~~~d~~~i~iwd~~~ 301 (424)
++ |+. |++||+++
T Consensus 370 ~s-d~~-i~iw~~~~ 382 (383)
T 3ei3_B 370 GM-GFN-ILIWNRED 382 (383)
T ss_dssp EE-TTE-EEEEECC-
T ss_pred ec-CCc-EEEEecCC
Confidence 97 899 99999874
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=284.81 Aligned_cols=287 Identities=15% Similarity=0.183 Sum_probs=231.9
Q ss_pred ccccCCceEEEEECCCCCee-EeecC---Ce-EEEEeCCcCcccccc-cccCCCeeeEEEecc---CceEEEEeCCcCCC
Q psy3710 6 SSTYKNGLLYAGFNQDQGCF-ACGME---DG-FRIYNCDPLKEKERQ-DFTDGGLGHVEMLFR---CNYLALVGGGTHPK 76 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~l-a~g~~---~~-i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~l~~~~~~~~~~ 76 (424)
+.+|.+.|++++|+|++..+ ++|+. ++ |++|++.+++..... ..|...|.+++|+|+ ++.+++++
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------ 87 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD------ 87 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE------
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec------
Confidence 56799999999999999655 46665 66 999999988764333 357889999999999 68888887
Q ss_pred cCCCeEEEEECCCCc-EEEEEe-ecCCeEEEEe------cCCceEEEe---eccEEEEeecCCCceeEEEeeCCC--CCe
Q psy3710 77 YPNNRVMIWDDLKKQ-VVICLE-FNAPVKGVRL------RRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPN--PKG 143 (424)
Q Consensus 77 ~~d~~i~iwd~~~~~-~~~~~~-~~~~v~~~~~------~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~--~~~ 143 (424)
.|+.|++||+.+++ .+..+. |...|.++.| +|++..+++ |+.|++||+......+..+..+.. ...
T Consensus 88 -~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 88 -FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp -TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred -CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 58999999999888 777777 8899999954 678766665 899999999744346777765543 234
Q ss_pred eEEEe----ecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc---CCCEEEEEecCCcEEEEEECC
Q psy3710 144 LCVLC----PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ---TGTRLATASYKGTLIRVFDTG 216 (424)
Q Consensus 144 ~~~~~----~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~~i~iwd~~ 216 (424)
+.++. ++|+++++++ ++.||.|++||++++ + ......|...|.+++|+| +++++++++.|+. |++||++
T Consensus 167 v~~~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~-~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~ 242 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCA-GYDNGDIKLFDLRNM-A-LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMR 242 (357)
T ss_dssp EEEEEEECCCC-CCCEEEE-EETTSEEEEEETTTT-E-EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEE-EccCCeEEEEECccC-c-eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCc
Confidence 66666 7899999998 999999999999985 3 345567899999999999 9999999999999 9999998
Q ss_pred CcceeeEEe-----c---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC------------------CeeeccCCC
Q psy3710 217 SGQKLNELR-----R---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP------------------PLDIAAHEA 270 (424)
Q Consensus 217 ~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~------------------~~~~~~~~~ 270 (424)
+++....+. . .+..++++|++..++++++.||.|++||++.+... ...+..|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 322 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ 322 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC
Confidence 876655443 3 37788999999978888999999999999875432 345678999
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEEECCCCce
Q psy3710 271 PLSCIALNQTGTRLA-TASYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 271 ~v~~~~~~~~~~~l~-~~~~d~~~i~iwd~~~~~~ 304 (424)
.|++++|+|++++|+ +++.|+. |++||+.+.+.
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~-i~iw~~~~~~~ 356 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQT-VRVLIVTKLNK 356 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSE-EEEEEECC---
T ss_pred CeeEEEEcCCCCeEEEEecCCCc-EEEEECCCccc
Confidence 999999999999998 8999999 99999987654
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-39 Score=292.96 Aligned_cols=331 Identities=12% Similarity=0.140 Sum_probs=245.3
Q ss_pred cccCCceEEEEECC-CCCeeEeecCCe-EEEEeCCc---Cccc-cccc-ccCCCeeeEEEeccCceEEEEeCCcCCCcCC
Q psy3710 7 STYKNGLLYAGFNQ-DQGCFACGMEDG-FRIYNCDP---LKEK-ERQD-FTDGGLGHVEMLFRCNYLALVGGGTHPKYPN 79 (424)
Q Consensus 7 ~~h~~~V~~~~~s~-~g~~la~g~~~~-i~iw~~~~---~~~~-~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d 79 (424)
.+|.+.|++++|+| ++++||+|+.++ |+|||+.+ +... .... .|.+.|.+++|+++++.+++++ .|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS-------KD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE-------TT
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe-------CC
Confidence 78999999999999 999999999998 99999876 3321 1222 3789999999999999999988 68
Q ss_pred CeEEEEECC---CCcEEEEEe-------------ecCCeEEEE--ecCCceEEEe---eccEEEEeecCCCceeEEEeeC
Q psy3710 80 NRVMIWDDL---KKQVVICLE-------------FNAPVKGVR--LRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETN 138 (424)
Q Consensus 80 ~~i~iwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~ 138 (424)
+.|++||+. +++...... +...+.++. +++++.++++ |+.|++||++ ..+.+..+..+
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~ 211 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR-TLERLQIIENS 211 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT-TCCEEEEEECC
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCeeeEEEccC
Confidence 999999984 565554443 223455555 4467766665 8999999997 78888888873
Q ss_pred CCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc-cccCCeEEEEEc----cCCCEEEEEecCCcEEEEE
Q psy3710 139 PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALN----QTGTRLATASYKGTLIRVF 213 (424)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~~~d~~~i~iw 213 (424)
.+...+.+++|+|++++|++ |+.||.|++||++++ ..+..+. .|..+|.+++|+ |++.+|++++.|+. |++|
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iw 288 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLIL-GTTRGIIDIWDIRFN-VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIW 288 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEE-EETTSCEEEEETTTT-EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEE
T ss_pred CCCCceEEEEECCCCCEEEE-EcCCCeEEEEEcCCc-cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EEEE
Confidence 23345899999999999998 999999999999985 5556554 788899999665 46789999999999 9999
Q ss_pred ECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc--CCCCeEEEEEcCCCCEEEEEe
Q psy3710 214 DTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 214 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 288 (424)
|+++++.+..+..+ +....++|.+..+. + ..+.+ |...|++++|+ ++++|++++
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~---------------~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLE-----E---------------LNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGG-----G---------------CCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccc-----c---------------ceecccccCCceEEEEEC-CceEEEecC
Confidence 99999999888765 44455666654431 0 01223 88999999999 779999999
Q ss_pred CCCcEEEEEECCCCceeeeeccCC---cEEEEEe--CCCcEEEEE--ccccccccccccceeeeccCccccCCceeeEEe
Q psy3710 289 YKGTLIRVFDTGSGQKLNELRRDS---SYLCVSS--DHGTVHVFS--VDEAQKINKQSSLASASFLPKYFSSSWSFCKFQ 361 (424)
Q Consensus 289 ~d~~~i~iwd~~~~~~~~~~~~~~---~~l~~~~--~d~~i~iw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (424)
.|+. |++||+.+++.+..+.... ..+.... .+..+.+-. ..... ......
T Consensus 348 ~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 404 (437)
T 3gre_A 348 ATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTH----------------------SVDDSL 404 (437)
T ss_dssp GGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------------------------------
T ss_pred CCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccccc----------------------ccCccc
Confidence 9999 9999999999988876531 1111111 111111111 00000 011234
Q ss_pred ecCCCceEEEEecC--CCeEEEEeccCcEEEEE
Q psy3710 362 IPSDPPCICAFGAD--SNSIIVICADGSYYKFM 392 (424)
Q Consensus 362 ~~~~~~~~~~~s~~--~~~l~~~~~dg~v~~~~ 392 (424)
.|...|..++|+++ +.+|++|+.||.|++|+
T Consensus 405 ~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 405 YHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 57788999999998 77999999999999995
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=283.44 Aligned_cols=276 Identities=15% Similarity=0.160 Sum_probs=238.5
Q ss_pred ccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEE
Q psy3710 8 TYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWD 86 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd 86 (424)
+|.+.|++++|+|++++|++|+.++ |++|+ .+++.......|...+.+++|+|+++++++++ .|+.|++||
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i~iwd 177 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMD-------VENVTILWN 177 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEE-------TTCCEEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEe-------cCCeEEEEE
Confidence 4788999999999999999999888 99999 55566666667899999999999999999888 589999999
Q ss_pred CCCCcEEEEEe-ecCC---------------eEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEe
Q psy3710 87 DLKKQVVICLE-FNAP---------------VKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLC 148 (424)
Q Consensus 87 ~~~~~~~~~~~-~~~~---------------v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (424)
+.+++.+..+. +... +.++.|++++.+++. ++.|++||+. ..+.+..+..+.. .+.+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~-~~~~~~~~~~~~~--~i~~~~ 254 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT-EKTPTGKLIGHHG--PISVLE 254 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETT-CSSCSEEECCCSS--CEEEEE
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC-CCceeeeeccCCC--ceEEEE
Confidence 99999988887 4444 899999999887766 8999999997 6677777776664 488999
Q ss_pred ecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc-
Q psy3710 149 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG- 227 (424)
Q Consensus 149 ~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~- 227 (424)
++|++++|++ ++.||.|++||++++ +....+..|...|.+++|+|++ .+++++.|+. |++||+++++.+..+..+
T Consensus 255 ~~~~~~~l~~-~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~ 330 (425)
T 1r5m_A 255 FNDTNKLLLS-ASDDGTLRIWHGGNG-NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIVDG 330 (425)
T ss_dssp EETTTTEEEE-EETTSCEEEECSSSB-SCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEE-EcCCCEEEEEECCCC-ccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEecccCC
Confidence 9999999998 999999999999986 6778888999999999999999 9999999999 999999999988888753
Q ss_pred --eeeeeecCCCCeEEEEeecCCeEEEEeCCCCC-------------------CCCeeeccCCC--CeEEEEEcCCCCEE
Q psy3710 228 --LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE-------------------RPPLDIAAHEA--PLSCIALNQTGTRL 284 (424)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-------------------~~~~~~~~~~~--~v~~~~~~~~~~~l 284 (424)
+..++++|++..+++ ++.||.|++||+.+.. .....+..|.. .|++++|+|++++|
T Consensus 331 ~~i~~~~~s~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 409 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAV-AFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI 409 (425)
T ss_dssp CCEEEEEECTTSSEEEE-EETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEE
T ss_pred ccEEEEEEcCCCCEEEE-EECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceE
Confidence 778899999887665 8899999999998755 13556677866 99999999999999
Q ss_pred EEEeCCCcEEEEEECC
Q psy3710 285 ATASYKGTLIRVFDTG 300 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~ 300 (424)
++++.||. |++||++
T Consensus 410 ~~~~~dg~-i~iw~~~ 424 (425)
T 1r5m_A 410 SVAYSLQE-GSVVAIP 424 (425)
T ss_dssp EEEESSSC-CEEEECC
T ss_pred EEEecCce-EEEEeec
Confidence 99999999 9999986
No 64
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.3e-37 Score=279.56 Aligned_cols=277 Identities=14% Similarity=0.225 Sum_probs=217.2
Q ss_pred ccccccCCCeeeEEEeccC-ceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe---ecCCeEEEEecC-CceEEEe---
Q psy3710 45 ERQDFTDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAPVKGVRLRR-DKIVVVL--- 116 (424)
Q Consensus 45 ~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~-~~~~~~~--- 116 (424)
.....|.+.|.+++|+|++ +++++++ .|+.|++||+.+++....+. |...|.+++|+| ++..+++
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGS-------KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEE-------BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEc-------CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 3345678999999999999 8888887 58999999999888887765 789999999999 5566654
Q ss_pred eccEEEEeecCCCceeEEEeeCC-CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNP-NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 195 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 195 (424)
|+.|++||+. . ..+..+..+. ....+.+++++|+++++++ |+.|+.|++||++. .....+.+|...|.+++|+|
T Consensus 140 d~~i~iwd~~-~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~d~~~--~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 140 RGATTLRDFS-G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLAT-GDSTGRLLLLGLDG--HEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp TTEEEEEETT-S-CEEEEEECCCCSSCCEEEEEEETTTTEEEE-EETTSEEEEEETTS--CEEEEEECSSSCEEEEEECS
T ss_pred CCEEEEEECC-C-CceEEEeccCCCCCCeEEEEECCCCCEEEE-ECCCCCEEEEECCC--CEEEEeccCCCcEEEEEECC
Confidence 8999999996 3 4555554433 2345889999999999998 99999999999953 67788889999999999999
Q ss_pred CCC-EEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEE
Q psy3710 196 TGT-RLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSC 274 (424)
Q Consensus 196 ~~~-~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 274 (424)
+++ ++++++.|+. |++||+++.+.... ....+ +|...|.+
T Consensus 215 ~~~~~l~s~~~d~~-i~iwd~~~~~~~~~-------------------------------------~~~~~-~~~~~v~~ 255 (383)
T 3ei3_B 215 RCDWLMATSSVDAT-VKLWDLRNIKDKNS-------------------------------------YIAEM-PHEKPVNA 255 (383)
T ss_dssp SCTTEEEEEETTSE-EEEEEGGGCCSTTC-------------------------------------EEEEE-ECSSCEEE
T ss_pred CCCCEEEEEeCCCE-EEEEeCCCCCcccc-------------------------------------eEEEe-cCCCceEE
Confidence 998 8999999999 99999987431100 01111 57788889
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEEECCCCceeeee------------------ccCCcEEE---------EEeCCCcEEE
Q psy3710 275 IALNQ-TGTRLATASYKGTLIRVFDTGSGQKLNEL------------------RRDSSYLC---------VSSDHGTVHV 326 (424)
Q Consensus 275 ~~~~~-~~~~l~~~~~d~~~i~iwd~~~~~~~~~~------------------~~~~~~l~---------~~~~d~~i~i 326 (424)
++|+| ++++|++++.|+. |++||+++++.+..+ .|++..++ +++.|+.|++
T Consensus 256 ~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~i 334 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDI 334 (383)
T ss_dssp EEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEE
T ss_pred EEEcCCCCCEEEEEcCCCc-EEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEE
Confidence 99999 8889999998888 999998876654332 22333333 5568999999
Q ss_pred EEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 327 FSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 327 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
||+.+++.+...... .+.+.+..++|+|++++|++++ ||.|++|+++
T Consensus 335 wd~~~~~~~~~l~~~--------------------~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 335 YDANSGGLVHQLRDP--------------------NAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp EETTTCCEEEEECBT--------------------TBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred EecCCCceeeeecCC--------------------CCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 999998765442211 0235566779999999999997 9999999986
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=269.09 Aligned_cols=293 Identities=12% Similarity=0.120 Sum_probs=212.5
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEE
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKV 122 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v 122 (424)
...|.+.|.+++|+|+++++++++ .|+.|++||+.+++.+..+. |...|.+++|+|++.++++ |+.|++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCS-------KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEE-------SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEe-------CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 456899999999999999999988 58999999999999999998 8999999999999977765 899999
Q ss_pred EeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC-----CeEEEEeCCCCCC----------CCcccccccC-
Q psy3710 123 YTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADPER----------PPLDIAAHEA- 186 (424)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d-----g~i~i~d~~~~~~----------~~~~~~~~~~- 186 (424)
||+. +++.+..+. +. ..+.+++|+|+++++++ ++.+ |.|++||+..... ....+..|..
T Consensus 101 wd~~-~~~~~~~~~-~~--~~v~~~~~~~~~~~l~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 101 WDVS-NGQCVATWK-SP--VPVKRVEFSPCGNYFLA-ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EETT-TCCEEEEEE-CS--SCEEEEEECTTSSEEEE-EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EECC-CCcEEEEee-cC--CCeEEEEEccCCCEEEE-ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 9996 677777776 33 45889999999999998 8888 9999999987532 3334455665
Q ss_pred -CeEEEEEccCCCEEEEEecCCcEEEEEECCC-cceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC
Q psy3710 187 -PLSCIALNQTGTRLATASYKGTLIRVFDTGS-GQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP 261 (424)
Q Consensus 187 -~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 261 (424)
.+.+++|+|++++|++++.|+. |++||+++ .+.+..+..+ +..++++|++..+++ ++.|+.|++||+++.+.
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~- 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGK-ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFIT-SSRDTNSFLVDVSTLQV- 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSE-EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTCCE-
T ss_pred cceeEEEEcCCCCEEEEEcCCCE-EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEE-ecCCceEEEEECCCCce-
Confidence 8999999999999999999999 99999988 5655555422 444555554444333 45555555555544321
Q ss_pred Ceeecc-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEcccccccccccc
Q psy3710 262 PLDIAA-HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSS 340 (424)
Q Consensus 262 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 340 (424)
...- +...+.+++|+|+++++++++.++. ..+|..... .....+++||+.+++.+.
T Consensus 253 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~----------------~~~~~i~~~d~~~~~~~~---- 309 (369)
T 3zwl_B 253 --LKKYETDCPLNTAVITPLKEFIILGGGQEA-KDVTTTSAN----------------EGKFEARFYHKIFEEEIG---- 309 (369)
T ss_dssp --EEEEECSSCEEEEEECSSSSEEEEEECCC------------------------------CEEEEEETTTCCEEE----
T ss_pred --eeeecCCCCceeEEecCCCceEEEeecCCC-ceEEEEecC----------------CCcceeEEEecCCCcchh----
Confidence 0001 2334555555555555555555554 443332211 112278999998876543
Q ss_pred ceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 341 LASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
.+..|.+.+..++|+|++++|++++.||.|++|++..
T Consensus 310 ------------------~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 310 ------------------RVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ------------------EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred ------------------heecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 2455678899999999999999999999999999973
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.8e-37 Score=276.77 Aligned_cols=279 Identities=14% Similarity=0.193 Sum_probs=224.7
Q ss_pred ccccCCceEEEEECCC---C-C-eeEeecCCeEEEEeCCcCcccccccc-----cCCCeeeEEEecc----CceEEEEeC
Q psy3710 6 SSTYKNGLLYAGFNQD---Q-G-CFACGMEDGFRIYNCDPLKEKERQDF-----TDGGLGHVEMLFR----CNYLALVGG 71 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~---g-~-~la~g~~~~i~iw~~~~~~~~~~~~~-----~~~~i~~~~~~~~----~~~l~~~~~ 71 (424)
+.+|.++|++++|+|+ + . ++++++++.|++|++.+++....... |.+.+.+++|+|+ +.++++++
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~- 92 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG- 92 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE-
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec-
Confidence 4589999999999984 3 3 55556666699999987766433322 5678999999999 55777777
Q ss_pred CcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEE---eeCCCCCe
Q psy3710 72 GTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVF---ETNPNPKG 143 (424)
Q Consensus 72 ~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~---~~~~~~~~ 143 (424)
.|+.|++||+.+++.+..+. |...|.+++|+| ++.++++ |+.|++||++ .++.+..+ ..+. ..
T Consensus 93 ------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~--~~ 163 (366)
T 3k26_A 93 ------SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ-TDTLVAIFGGVEGHR--DE 163 (366)
T ss_dssp ------TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT-TTEEEEEECSTTSCS--SC
T ss_pred ------CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee-cCeEEEEeccccccc--Cc
Confidence 58999999999999999998 899999999999 7766665 8999999996 66777766 3444 55
Q ss_pred eEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc----------------------------cccCCeEEEEEcc
Q psy3710 144 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA----------------------------AHEAPLSCIALNQ 195 (424)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------~~~~~v~~~~~~~ 195 (424)
+.+++|+|+++++++ ++.||.|++||++++ +....+. .|...|.+++|+
T Consensus 164 v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 164 VLSADYDLLGEKIMS-CGMDHSLKLWRINSK-RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp EEEEEECTTSSEEEE-EETTSCEEEEESCSH-HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred eeEEEECCCCCEEEE-ecCCCCEEEEECCCC-ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 899999999999998 999999999999875 3333333 299999999999
Q ss_pred CCCEEEEEecCCcEEEEEECCCcce--------------eeEEecc---eeeeeecCC--CCeEEEEeecCCeEEEEeCC
Q psy3710 196 TGTRLATASYKGTLIRVFDTGSGQK--------------LNELRRG---LCVLCPNSN--NSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 196 ~~~~l~~~~~d~~~i~iwd~~~~~~--------------~~~~~~~---~~~~~~~~~--~~~~~~~~~~dg~i~i~d~~ 256 (424)
++++++++.|+. |++||+++++. +..+..+ +..++++|+ +..++ +|+.||.|++||+.
T Consensus 241 -~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~-~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 241 -GDLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA-LGNQVGKLYVWDLE 317 (366)
T ss_dssp -TTEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE-EECTTSCEEEEECC
T ss_pred -CCEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE-EEecCCcEEEEECC
Confidence 679999999999 99999987644 4455443 667888888 65555 58999999999999
Q ss_pred CCCCC---CeeeccC--CCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCC
Q psy3710 257 DPERP---PLDIAAH--EAPLSCIALNQTGTRLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 257 ~~~~~---~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~ 301 (424)
+++.. ...+..| ...|++++|+|++++|++++.||. |++||+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~~~ 366 (366)
T 3k26_A 318 VEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS-IWRWDRLR 366 (366)
T ss_dssp SSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEEC--
T ss_pred CCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCE-EEEEEecC
Confidence 87632 2355566 799999999999999999999999 99999863
No 67
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-37 Score=278.97 Aligned_cols=287 Identities=16% Similarity=0.199 Sum_probs=232.3
Q ss_pred cccCCc--eEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccc-cCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 7 STYKNG--LLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDF-TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 7 ~~h~~~--V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.+|.+. +.++.|++ ..+++++.++ |++|++.+++....... |.+.|.+++|+|+++++++++ .|+.|
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-------~dg~i 158 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-------GNGLV 158 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-------TTSCE
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-------CCCeE
Confidence 355554 44466665 3455555555 99999998887555444 788999999999999999888 58999
Q ss_pred EEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee
Q psy3710 83 MIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (424)
++||+.+++.+..+. |...|.+++|+++..+.++ |+.|++||++........+..|.. .+.+++|+|+++++++ |
T Consensus 159 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s-~ 235 (401)
T 4aez_A 159 DIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS--EVCGLAWRSDGLQLAS-G 235 (401)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEE-E
T ss_pred EEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC--CeeEEEEcCCCCEEEE-E
Confidence 999999999999887 8999999999776554444 899999999755667777777764 4889999999999998 9
Q ss_pred ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC-EEEEEe--cCCcEEEEEECCCcceeeEEecc--eeeeeecC
Q psy3710 161 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATAS--YKGTLIRVFDTGSGQKLNELRRG--LCVLCPNS 235 (424)
Q Consensus 161 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~ 235 (424)
+.||.|++||++++ .....+..|...|.+++|+|++. .+++++ .|+. |++||+++++.+..+..+ +..++++|
T Consensus 236 ~~d~~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~~~~~v~~~~~s~ 313 (401)
T 4aez_A 236 GNDNVVQIWDARSS-IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVDAGSQVTSLIWSP 313 (401)
T ss_dssp ETTSCEEEEETTCS-SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEECSSCEEEEEECS
T ss_pred eCCCeEEEccCCCC-CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEeCCCcEEEEEECC
Confidence 99999999999986 66777889999999999999775 555554 6999 999999999988888654 78899999
Q ss_pred CCCeEEEE-eecCCeEEEEeCCCCCCC-CeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 236 NNSLLAFP-GRKSGHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 236 ~~~~~~~~-~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
++..++++ |+.||.|++||+.++... ...+.+|...|.+++|+|++++|++++.||. |++|++.+++.+...
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~-i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN-LKFWRVYDGDHVKRP 387 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE-EEEEECCC-------
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc-EEEEECCCCcccccc
Confidence 99988876 458999999999886432 2346689999999999999999999999999 999999988876653
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-36 Score=275.25 Aligned_cols=282 Identities=15% Similarity=0.195 Sum_probs=235.2
Q ss_pred ceEEEEECCCCCeeEeecCCeEEEEeCCcCccccccc--ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 12 GLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQD--FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
.++.|+||++ ++||+|.++.|+|||..+++...... .|...|.+++|+|+++++++++ .|++|++||+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-------~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------CCCeEEEEEcCC
Confidence 4567999976 58999997779999999998755443 4667899999999999999988 689999999999
Q ss_pred CcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEE
Q psy3710 90 KQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVH 167 (424)
Q Consensus 90 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~ 167 (424)
++.+..+. |...+.++.+++.....+. |+.+++||.......+..+..|... ++.+.++|++.++++ ++.|+.++
T Consensus 179 ~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~--~~~~~~~~~g~~l~s-~~~D~~v~ 255 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRWAPDGRHLAS-GGNDNLVN 255 (420)
T ss_dssp TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEE-EETTSCEE
T ss_pred CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccc--eeeeeecCCCCeeee-eeccccce
Confidence 99999888 8899999998776544444 8999999997566777778877744 888999999999998 99999999
Q ss_pred EEeCCCCCC---CCcccccccCCeEEEEEccCCC-EEEE--EecCCcEEEEEECCCcceeeEEecc--eeeeeecCCCCe
Q psy3710 168 LVDLADPER---PPLDIAAHEAPLSCIALNQTGT-RLAT--ASYKGTLIRVFDTGSGQKLNELRRG--LCVLCPNSNNSL 239 (424)
Q Consensus 168 i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~ 239 (424)
+|+...+.. .......|...|.+++|+|++. .+++ |+.|+. |++||+.++++...+..+ +..+.+++++..
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~ 334 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDAHSQVCSILWSPHYKE 334 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEECSSCEEEEEEETTTTE
T ss_pred EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeeccccceeeeeecCCCCe
Confidence 999987532 3446678999999999999765 4444 457899 999999999998888765 667788999988
Q ss_pred EEEE-eecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee
Q psy3710 240 LAFP-GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE 307 (424)
Q Consensus 240 ~~~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~ 307 (424)
++++ |..|+.|++||+.+++ ++..+.+|.+.|++++|+|||++|++|+.|++ |++||+....+...
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~-~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t-vriWdv~~~~~~~~ 401 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMA-KVAELKGHTSRVLSLTMSPDGATVASAAADET-LRLWRCFELDPARR 401 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSCEEEEETTTE-EEEECCSCSSCC--
T ss_pred EEEEEecCCCEEEEEECCCCc-EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe-EEEEECCCCCccch
Confidence 8775 4479999999999876 46678899999999999999999999999999 99999977655443
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=265.47 Aligned_cols=282 Identities=12% Similarity=0.075 Sum_probs=235.2
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
..+.+|.+.|++++| |++++|++|+.++ |++||+.+.+.......|.+.+.+++|+|+++.+++++ .|+.+
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~i 83 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-------KDTMI 83 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-------TTSCE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-------CCCeE
Confidence 348899999999999 9999999999999 99999988887776777899999999999999999988 68999
Q ss_pred EEEECCCC---cEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecC-CCCeE
Q psy3710 83 MIWDDLKK---QVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNS-NNSLL 156 (424)
Q Consensus 83 ~iwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 156 (424)
++|++... +.+..+. |...|.++.|.++..+.+. |+.|++|| ..+....+..+..+ +.++.+.| ++..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~--v~~~~~~~~~~~~l 158 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK---EGSLVYNLQAHNAS--VWDAKVVSFSENKF 158 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE---TTEEEEEEECCSSC--EEEEEEEETTTTEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc---CCcEEEecccCCCc--eeEEEEccCCCCEE
Confidence 99998654 4555665 8899999999655444444 89999999 45667777777644 77778777 88888
Q ss_pred EEeeccCCeEEEEeCCCCCCCCccccc-ccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeee
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLC 232 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~ 232 (424)
++ ++.||.|++||.. .....+.. |...+.+++|+|++. +++++.|+. |++||+++++.+..+..+ +..++
T Consensus 159 ~~-~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~i~~~~ 232 (313)
T 3odt_A 159 LT-ASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEGHESFVYCIK 232 (313)
T ss_dssp EE-EETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EE-EECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhcCCceEEEEE
Confidence 87 9999999999943 34455555 899999999999988 999999999 999999999999888754 77889
Q ss_pred ecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 233 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 233 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
++|++ . +++++.||.|++||+++++ ....+..|...|.+++|+|+++ +++++.|+. |++||+++++......
T Consensus 233 ~~~~~-~-l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 233 LLPNG-D-IVSCGEDRTVRIWSKENGS-LKQVITLPAISIWSVDCMSNGD-IIVGSSDNL-VRIFSQEKSRWASEDE 304 (313)
T ss_dssp ECTTS-C-EEEEETTSEEEEECTTTCC-EEEEEECSSSCEEEEEECTTSC-EEEEETTSC-EEEEESCGGGCCC---
T ss_pred EecCC-C-EEEEecCCEEEEEECCCCc-eeEEEeccCceEEEEEEccCCC-EEEEeCCCc-EEEEeCCCCceeehhh
Confidence 99998 3 5569999999999999876 4566778999999999999998 667999999 9999999887765543
No 70
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.9e-37 Score=271.10 Aligned_cols=305 Identities=12% Similarity=0.132 Sum_probs=234.6
Q ss_pred cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEE--eecCCeEEEEecCC---ceEEEe---ecc
Q psy3710 48 DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL--EFNAPVKGVRLRRD---KIVVVL---EGL 119 (424)
Q Consensus 48 ~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~---~~~~~~---~~~ 119 (424)
..|.+.|.+++|+|+++.++++++.. ..|+.|++||+.+++..... .|...|.+++|+|+ +.++++ |+.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~---~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFA---RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC-----CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred cCCCCceEEEEEcCCCceEEEecCcc---CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 44889999999999998777666320 01799999999998875543 48899999999998 455554 899
Q ss_pred EEEEeecCCCceeEEEeeCCCCCeeEEE------eecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccC----CeE
Q psy3710 120 IKVYTFIQCPQQLHVFETNPNPKGLCVL------CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEA----PLS 189 (424)
Q Consensus 120 i~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~v~ 189 (424)
|++||+......+..+..|... +.++ +++|++++|++ ++.||.|++||+.++......+..|.+ .+.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVT-GSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSC--EEEEEEESGGGCC-CCCEEEE-EETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred EEEEeCCCCCccEEEEEecccc--eEEEeeccccccCCCccEEEE-EeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999997333377888877755 6666 56889999998 999999999999987446777766554 899
Q ss_pred EEE----EccCCCEEEEEecCCcEEEEEECCCcceeeEEe--cceeeeeecC---CCCeEEEEeecCCeEEEEeCCCCCC
Q psy3710 190 CIA----LNQTGTRLATASYKGTLIRVFDTGSGQKLNELR--RGLCVLCPNS---NNSLLAFPGRKSGHVHLVDLADPER 260 (424)
Q Consensus 190 ~~~----~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dg~i~i~d~~~~~~ 260 (424)
+++ |+|+++++++++.|+. |++||+++++...... ..+..++++| ++..+++ ++.||.|++||+++.+.
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGD-IKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA-TSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSE-EEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE-EESTTEEEEEEEEEEET
T ss_pred EEEEEeccCCCCCEEEEEccCCe-EEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE-ECCCCeEEEEeCcCCCc
Confidence 998 7889999999999999 9999999988765543 3478889999 6666554 89999999999988654
Q ss_pred CCe----eeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccc
Q psy3710 261 PPL----DIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKI 335 (424)
Q Consensus 261 ~~~----~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~ 335 (424)
... .+.+|...|++++|+|+++ +|++++.|+. |++||++++.....+.+++...... +..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~g~~~~~~---~~~----------- 311 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWKYEYPIQRSKKDSEGIEMGVA---GSV----------- 311 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEEEECCSCC--CCTTSCCCCCC---CEE-----------
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEeecCCCcccccccCCCCccccc---ccc-----------
Confidence 322 2238999999999999998 8999999999 9999998776655544444222110 010
Q ss_pred cccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEE-EEeccCcEEEEEec
Q psy3710 336 NKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSII-VICADGSYYKFMFN 394 (424)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~~~dg~v~~~~~~ 394 (424)
..+..+..|.++++.++|+|++++|+ +++.||.|++|++.
T Consensus 312 -------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 312 -------------------SLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp -------------------EEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred -------------------ceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 01223556778899999999999998 79999999999997
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.5e-37 Score=282.07 Aligned_cols=275 Identities=16% Similarity=0.199 Sum_probs=212.2
Q ss_pred cccCCCeeeEEEeccC-ceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe---ecCCeEEEEecC-CceEEEe---ecc
Q psy3710 48 DFTDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAPVKGVRLRR-DKIVVVL---EGL 119 (424)
Q Consensus 48 ~~~~~~i~~~~~~~~~-~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~-~~~~~~~---~~~ 119 (424)
..|...|++++|+|.. +.|++.+ .||+|+|||+.+++....+. |.+.|.+++|+| ++.++++ |++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs-------~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGS-------KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEE-------TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEe-------CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 3467889999999954 5677666 58999999998776544333 789999999997 5655554 899
Q ss_pred EEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC-
Q psy3710 120 IKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT- 198 (424)
Q Consensus 120 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 198 (424)
|++||++ ..........+.....+++++++|++.+|++ |+.||.|++||++. +.+..+.+|...|.+++|+|++.
T Consensus 189 v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 189 TRLQDFK-GNILRVFASSDTINIWFCSLDVSASSRMVVT-GDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp EEEEETT-SCEEEEEECCSSCSCCCCCEEEETTTTEEEE-ECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSS
T ss_pred EEEeecc-CCceeEEeccCCCCccEEEEEECCCCCEEEE-EeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCce
Confidence 9999996 4333333334444455778899999999998 99999999999975 56778899999999999999876
Q ss_pred EEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEc
Q psy3710 199 RLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALN 278 (424)
Q Consensus 199 ~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 278 (424)
++++++.|+. |++||+++.+....+ ....+|...|++++|+
T Consensus 265 ~~~s~s~d~~-v~iwd~~~~~~~~~~--------------------------------------~~~~~h~~~v~~~~~s 305 (435)
T 4e54_B 265 FLATASVDQT-VKIWDLRQVRGKASF--------------------------------------LYSLPHRHPVNAACFS 305 (435)
T ss_dssp EEEEEETTSB-CCEEETTTCCSSSCC--------------------------------------SBCCBCSSCEEECCBC
T ss_pred EEEEecCcce-eeEEecccccccceE--------------------------------------EEeeeccccccceeEC
Confidence 6789999999 999999876532211 1223799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEECCCCceeee------------------eccCCcEEEEEe------------CCCcEEEEE
Q psy3710 279 QTGTRLATASYKGTLIRVFDTGSGQKLNE------------------LRRDSSYLCVSS------------DHGTVHVFS 328 (424)
Q Consensus 279 ~~~~~l~~~~~d~~~i~iwd~~~~~~~~~------------------~~~~~~~l~~~~------------~d~~i~iw~ 328 (424)
|+|++|++++.|+. |++||+.+++.... +.|++.++++++ .++.|++||
T Consensus 306 pdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd 384 (435)
T 4e54_B 306 PDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFD 384 (435)
T ss_dssp TTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEEC
T ss_pred CCCCeeEEEcCCCE-EEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEE
Confidence 99999999999999 99999998876543 345566666664 235799999
Q ss_pred ccccccccccccceeeeccCccccCCceeeEEeecCCCceEE-EEecCCCeEEEEeccCcEEEEEecC
Q psy3710 329 VDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCIC-AFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
..+++.+.... ..|...+..+ +|+|+|++|++|+ |+.|++|++.+
T Consensus 385 ~~~g~~~~~l~---------------------~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 385 GNSGKMMCQLY---------------------DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp SSSCCEEEEEC---------------------CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred CCCCcEEEEEe---------------------CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 99887654321 1233445554 7999999999876 88999999973
No 72
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=276.48 Aligned_cols=300 Identities=16% Similarity=0.213 Sum_probs=239.4
Q ss_pred EEEEeCCcCcccccccccCCCeeeEEEec-cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe--------------
Q psy3710 33 FRIYNCDPLKEKERQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-------------- 97 (424)
Q Consensus 33 i~iw~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------------- 97 (424)
+++|+.+..+.......|.+.|.+++|+| +++++++++ .|+.|++||+.+++....+.
T Consensus 25 ~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 25 RRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGG-------SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEE-------TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred ceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEc-------CCCeEEEEECCCCcccceEecccccccccccccc
Confidence 78888888777776777999999999999 999999988 68999999999876655543
Q ss_pred ecCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecC---CCCeEEEeeccCCeEEEEe
Q psy3710 98 FNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNS---NNSLLAFPGRKSGHVHLVD 170 (424)
Q Consensus 98 ~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~dg~i~i~d 170 (424)
|...|.+++|+| ++.++++ |+.|++||+. ..+....+.. . ..+.++.+++ ++.++++ ++.+|.|++||
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d 172 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTN-TLQTADVFNF-E--ETVYSHHMSPVSTKHCLVAV-GTRGPKVQLCD 172 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETT-TTEEEEEEEC-S--SCEEEEEECSSCSSCCEEEE-EESSSSEEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCC-CCccceeccC-C--CceeeeEeecCCCCCcEEEE-EcCCCeEEEEe
Confidence 788999999999 5544443 8999999997 6676666653 2 3356666666 4447887 99999999999
Q ss_pred CCCCCCCCcccccccCCeEEEEEccCCC-EEEEEecCCcEEEEEECCCcc-eeeEEecceeeeeecCCCCeEEEEeecCC
Q psy3710 171 LADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSGQ-KLNELRRGLCVLCPNSNNSLLAFPGRKSG 248 (424)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 248 (424)
++++ .....+..|...|.+++|+|+++ .+++++.|+. |++||++++. .+..+... .+
T Consensus 173 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~-i~i~d~~~~~~~~~~~~~~--------~~----------- 231 (408)
T 4a11_B 173 LKSG-SCSHILQGHRQEILAVSWSPRYDYILATASADSR-VKLWDVRRASGCLITLDQH--------NG----------- 231 (408)
T ss_dssp SSSS-CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC-EEEEETTCSSCCSEECCTT--------TT-----------
T ss_pred CCCc-ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc-EEEEECCCCCccccccccc--------cc-----------
Confidence 9986 77788889999999999999998 5889999999 9999998775 33332211 00
Q ss_pred eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec-----------------cC
Q psy3710 249 HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-----------------RD 311 (424)
Q Consensus 249 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-----------------~~ 311 (424)
............|...|.+++|+|++++|++++.|+. |++||+.+++....+. ..
T Consensus 232 -------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (408)
T 4a11_B 232 -------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR-MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGC 303 (408)
T ss_dssp -------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSS
T ss_pred -------ccceeeccccccccCceeEEEEcCCCCEEEEecCCCe-EEEEECCCCccceeccccccccccccceeEEecCC
Confidence 0011123334589999999999999999999999999 9999999987654332 23
Q ss_pred CcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEE
Q psy3710 312 SSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKF 391 (424)
Q Consensus 312 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~ 391 (424)
+..+++++.|+.|++||+.+++.+.. +..|.+.+..++|+|++++|++++.||.|++|
T Consensus 304 ~~~~~~~~~~~~i~v~d~~~~~~~~~----------------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 361 (408)
T 4a11_B 304 SSEFVFVPYGSTIAVYTVYSGEQITM----------------------LKGHYKTVDCCVFQSNFQELYSGSRDCNILAW 361 (408)
T ss_dssp SSCEEEEEETTEEEEEETTTCCEEEE----------------------ECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CceEEEEecCCEEEEEECcCCcceee----------------------eccCCCeEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 56677788899999999998775433 44567789999999999999999999999999
Q ss_pred EecC
Q psy3710 392 MFNS 395 (424)
Q Consensus 392 ~~~~ 395 (424)
++..
T Consensus 362 ~~~~ 365 (408)
T 4a11_B 362 VPSL 365 (408)
T ss_dssp EECC
T ss_pred eCCC
Confidence 9984
No 73
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=258.87 Aligned_cols=277 Identities=14% Similarity=0.198 Sum_probs=229.1
Q ss_pred eEEEEECCCCCeeEeecCCeEEEEeCCcCccccccc--ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC
Q psy3710 13 LLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQD--FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK 90 (424)
Q Consensus 13 V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~ 90 (424)
.++|+||+++ +||+|.++.|+|||+++++...... .|...|.+++|+|+++++++++ .|++|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs-------~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------CCCcEEEeecCCc
Confidence 5789999986 8999987779999999998755443 4677899999999999999988 6899999999999
Q ss_pred cEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEE
Q psy3710 91 QVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHL 168 (424)
Q Consensus 91 ~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i 168 (424)
+.+..+. |...+.++.+.+.....+. ++.+.+|+.......+..+..|... +..+.++++++++++ ++.||.|++
T Consensus 100 ~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~s-~~~d~~i~i 176 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE--VCGLRWAPDGRHLAS-GGNDNLVNV 176 (318)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEE-EETTSCEEE
T ss_pred eeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc--eEEEEEcCCCCEEEE-EecCcceeE
Confidence 9999888 7888888877766544444 8899999987556667777777644 778889999999998 999999999
Q ss_pred EeCCCCCC---CCcccccccCCeEEEEEccCCCEE---EEEecCCcEEEEEECCCcceeeEEecc--eeeeeecCCCCeE
Q psy3710 169 VDLADPER---PPLDIAAHEAPLSCIALNQTGTRL---ATASYKGTLIRVFDTGSGQKLNELRRG--LCVLCPNSNNSLL 240 (424)
Q Consensus 169 ~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~ 240 (424)
||+.+++. .......|.+.|.+++++|++..+ ++++.++. |++||.+........... +...++.+.+..+
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDAHSQVCSILWSPHYKEL 255 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTTCCEEEEEECSSCEEEEEEETTTTEE
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEecccccccccccceeeeeeeeecccccce
Confidence 99987532 233455788899999999977643 35677888 999999988777666543 6778889998887
Q ss_pred EEE-eecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 241 AFP-GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 241 ~~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
+++ |+.|+.|++||+++++ ++..+.+|.+.|++++|+|+|++|++++.|++ |+|||+.+..
T Consensus 256 ~~~sg~~d~~i~iwd~~~~~-~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~-v~iWd~~~~d 317 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPTMA-KVAELKGHTSRVLSLTMSPDGATVASAAADET-LRLWRCFELD 317 (318)
T ss_dssp EEEECTTTCCEEEEETTTCC-EEEEECCCSSCEEEEEECTTSSCEEEEETTTE-EEEECCSCCC
T ss_pred EEEEEcCCCEEEEEECCCCc-EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe-EEEEECCCCC
Confidence 764 4589999999999876 46678899999999999999999999999999 9999997653
No 74
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-36 Score=262.26 Aligned_cols=249 Identities=14% Similarity=0.136 Sum_probs=198.2
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcC--cccccccccCCCeeeEEEecc--CceEEEEeCCcCCCcC
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPL--KEKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYP 78 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~~~~ 78 (424)
..+.+|.+.|++++|+|+|++||+|+.|+ |+||+++.. +.......|.+.|.+++|+++ ++++++++ .
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s-------~ 75 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------Y 75 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-------T
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc-------C
Confidence 45789999999999999999999999998 999998754 445556778999999999864 78888888 6
Q ss_pred CCeEEEEECCCCc--EEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCCc-eeEEEeeCCCCCeeEEEee
Q psy3710 79 NNRVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCPQ-QLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 79 d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 149 (424)
|++|++||+++++ .+..+. |...|.+++|+|+ +.++++ |+.|++||++.... ....+..|. ..+.+++|
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~--~~v~~~~~ 153 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA--IGVNSASW 153 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS--SCEEEEEE
T ss_pred CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc--CccceEee
Confidence 8999999998874 444555 7889999999997 555554 89999999973322 234555665 44888899
Q ss_pred cCC-------------CCeEEEeeccCCeEEEEeCCCCCC---CCcccccccCCeEEEEEccCC---CEEEEEecCCcEE
Q psy3710 150 NSN-------------NSLLAFPGRKSGHVHLVDLADPER---PPLDIAAHEAPLSCIALNQTG---TRLATASYKGTLI 210 (424)
Q Consensus 150 ~~~-------------~~~l~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~~i 210 (424)
+|+ +++|++ |+.|+.|++||++++.. ....+.+|...|.+++|+|++ .+|++++.|++ |
T Consensus 154 ~p~~~~~~~~~~~~~~~~~l~s-gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v 231 (297)
T 2pm7_B 154 APATIEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-C 231 (297)
T ss_dssp CCCC------------CCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-E
T ss_pred cCCcccccccCCCCCCcceEEE-EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-E
Confidence 886 467887 99999999999987522 345678999999999999984 79999999999 9
Q ss_pred EEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC
Q psy3710 211 RVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK 290 (424)
Q Consensus 211 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 290 (424)
++||+++........ ......|...|.+++|+|++++||+++.|
T Consensus 232 ~iWd~~~~~~~~~~~------------------------------------~~~~~~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 232 IIWTQDNEQGPWKKT------------------------------------LLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp EEEEESSTTSCCEEE------------------------------------ESSSSCCSSCEEEEEECSSSCCEEEEETT
T ss_pred EEEEeCCCCCcccee------------------------------------eeecccCCCcEEEEEECCCCCEEEEEcCC
Confidence 999987643110000 00012577889999999999999999999
Q ss_pred CcEEEEEECC
Q psy3710 291 GTLIRVFDTG 300 (424)
Q Consensus 291 ~~~i~iwd~~ 300 (424)
+. |++|+..
T Consensus 276 ~~-v~lw~~~ 284 (297)
T 2pm7_B 276 NK-VTLWKEN 284 (297)
T ss_dssp SC-EEEEEEC
T ss_pred Cc-EEEEEEC
Confidence 99 9999976
No 75
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-38 Score=285.24 Aligned_cols=314 Identities=12% Similarity=0.065 Sum_probs=243.6
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
-++-...|.+++|||||+++|+++.|+ |+ |...++.+ ..|...+..++|+|++ . ++.+.+
T Consensus 11 ~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg------~--------~~~~~~ 71 (588)
T 2j04_A 11 RKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE------F--------ENKLDF 71 (588)
T ss_dssp SCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC------C--------CCTTTT
T ss_pred HhHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC------C--------cceEEE
Confidence 456678999999999999999999999 88 75555443 5688999999999988 2 577777
Q ss_pred EECCCCcEEEEEeecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCC---CCeeEEEeecCCCCeEEE
Q psy3710 85 WDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPN---PKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 85 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 158 (424)
|+.+ +.....+.+...|.+++|+|+|..+|+ ||.|++|+.. . .+..+. |.. ...+.+++|||||++|++
T Consensus 72 ~~~~-~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~-~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 72 ELAQ-QNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN-K--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp SCCC-SSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT-E--EEEECC-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred EeCC-CceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC-c--eeeecc-CCCccccccEEEEEEcCCCCEEEE
Confidence 7753 223334456788999999999988876 8999999953 2 555555 432 235889999999999998
Q ss_pred eeccCCeEEEEeCCCCCC------CCccc----ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce---eeEEe
Q psy3710 159 PGRKSGHVHLVDLADPER------PPLDI----AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK---LNELR 225 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~------~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~---~~~~~ 225 (424)
|+.||+|++||+.++.. .+..+ .+|.+.|.+++|+|+| +++++.|+. |++||+.+++. ..+++
T Consensus 147 -gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 147 -GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp -EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEEE
T ss_pred -EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeeec
Confidence 99999999999998521 12444 6788999999999999 888899999 99999988773 24453
Q ss_pred -cc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEEEC
Q psy3710 226 -RG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIAL--NQTGTRLATASYKGTLIRVFDT 299 (424)
Q Consensus 226 -~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~~i~iwd~ 299 (424)
.+ +..++|+ +..++. ++ +++|++||+.+++...... +|.+.+..++| +|++..|++++.+|+ ++|..
T Consensus 223 ~~h~~~V~svaFs--g~~LAS-a~-~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~--klw~~ 295 (588)
T 2j04_A 223 NASRRKITDLKIV--DYKVVL-TC-PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY--KVLLE 295 (588)
T ss_dssp CCCSSCCCCEEEE--TTEEEE-EC-SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE--EEEES
T ss_pred ccccCcEEEEEEE--CCEEEE-Ee-CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC--EEEee
Confidence 32 6677887 555554 44 6999999999866322222 79999999999 999999999999985 99998
Q ss_pred CCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeE
Q psy3710 300 GSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSI 379 (424)
Q Consensus 300 ~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 379 (424)
.. ..++|++..+++. |+++++|+...+. +..... ...|..++|||||+.+
T Consensus 296 d~----~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-----------------------~~~I~~va~SPdG~~l 345 (588)
T 2j04_A 296 DE----LHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-----------------------TLVIHGISLSPDGYSI 345 (588)
T ss_dssp SS----EEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-----------------------EEEEEEEEECTTSSEE
T ss_pred cc----EEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-----------------------ceEEEEEEECCCCCEE
Confidence 82 3499999988885 9999999986543 222111 1236689999999999
Q ss_pred EEEec
Q psy3710 380 IVICA 384 (424)
Q Consensus 380 ~~~~~ 384 (424)
|+++.
T Consensus 346 A~~~~ 350 (588)
T 2j04_A 346 AIVYD 350 (588)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99876
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-35 Score=268.45 Aligned_cols=300 Identities=14% Similarity=0.176 Sum_probs=236.4
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc------EEEEEe-ecCCeEEEEecCC----c---e
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ------VVICLE-FNAPVKGVRLRRD----K---I 112 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~------~~~~~~-~~~~v~~~~~~~~----~---~ 112 (424)
...|.+.|.+++|+| +++++++ .|+.|++||+.+++ .+..+. |...|.+++|+|+ + .
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCS-------GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEE-------TTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEc-------CCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 456899999999988 7888887 58999999999887 566666 8999999999999 7 6
Q ss_pred EEEe---eccEEEEeecCCCce-----eEEEeeCCCC---CeeEEEeec----CCCCe-EEEeeccCCeEEEEeCCC---
Q psy3710 113 VVVL---EGLIKVYTFIQCPQQ-----LHVFETNPNP---KGLCVLCPN----SNNSL-LAFPGRKSGHVHLVDLAD--- 173 (424)
Q Consensus 113 ~~~~---~~~i~v~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~----~~~~~-l~~~~~~dg~i~i~d~~~--- 173 (424)
++++ |+.|++|++. ..+. +..+..+... ..+.+++|+ |++++ +++ ++.||.|++||+..
T Consensus 83 ~l~s~~~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRIT-REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA-TDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEETTSCEEEEEEE-ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEE-EETTSCEEEEEEESSSS
T ss_pred EEEEEcCCCCEEEEEcc-CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEE-EeCCCcEEEEeCCcccc
Confidence 6665 8999999997 5554 6667666321 458899999 99999 887 99999999999987
Q ss_pred ---CCCCCc-----cc-------ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec---------cee
Q psy3710 174 ---PERPPL-----DI-------AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR---------GLC 229 (424)
Q Consensus 174 ---~~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~---------~~~ 229 (424)
. ..+. .+ ..|...|.+++|+|++ ++++++.|+. |++||+++++.+..+.. .+.
T Consensus 161 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 161 ESNS-LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT-VQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHH-TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE-EEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cccc-ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc-EEEEECCCCceeEEEeccccccccCCccc
Confidence 5 4444 55 4488999999999999 9999999999 99999999998888765 267
Q ss_pred eeeecCCCCeEEEEeecC---CeEEEEeCCCCCCCCeeecc-------------CCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy3710 230 VLCPNSNNSLLAFPGRKS---GHVHLVDLADPERPPLDIAA-------------HEAPLSCIALNQTGTRLATASYKGTL 293 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d~~~ 293 (424)
.++++|++..+++ ++.| +.|++||+++++ ....+.. |...|.+++|+|++++|++++.|+.
T Consensus 238 ~i~~~~~~~~l~~-~~~d~~~g~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 314 (397)
T 1sq9_A 238 SVKFSPQGSLLAI-AHDSNSFGCITLYETEFGE-RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK- 314 (397)
T ss_dssp EEEECSSTTEEEE-EEEETTEEEEEEEETTTCC-EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE-
T ss_pred eEEECCCCCEEEE-EecCCCCceEEEEECCCCc-ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe-
Confidence 8899999887665 7888 999999999875 3455666 9999999999999999999999999
Q ss_pred EEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEe
Q psy3710 294 IRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFG 373 (424)
Q Consensus 294 i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 373 (424)
|++||+++++.+..+.....-+. ...| ...+.. .....|..++..++|+
T Consensus 315 i~iwd~~~~~~~~~~~~~~~~~~-~~~~-------~~~g~~-----------------------~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 315 LRFWDVKTKERITTLNMHCDDIE-IEED-------ILAVDE-----------------------HGDSLAEPGVFDVKFL 363 (397)
T ss_dssp EEEEETTTTEEEEEEECCGGGCS-SGGG-------CCCBCT-----------------------TSCBCSSCCEEEEEEE
T ss_pred EEEEEcCCCceeEEEecccCccc-chhh-------hhcccc-----------------------ccccccCCceeEEEec
Confidence 99999999887776651100000 0000 011000 0023356789999999
Q ss_pred cCC----------CeEEEEeccCcEEEEEec
Q psy3710 374 ADS----------NSIIVICADGSYYKFMFN 394 (424)
Q Consensus 374 ~~~----------~~l~~~~~dg~v~~~~~~ 394 (424)
|++ ++|++++.||.|++|++.
T Consensus 364 ~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 364 KKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp CTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cccccccccccccceEEEecCCCcEEEEEcC
Confidence 998 799999999999999997
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8e-36 Score=265.11 Aligned_cols=281 Identities=13% Similarity=0.119 Sum_probs=207.8
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE--------EEEE--e-ecCCeEEEEecCCceEEEe---
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV--------VICL--E-FNAPVKGVRLRRDKIVVVL--- 116 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~--------~~~~--~-~~~~v~~~~~~~~~~~~~~--- 116 (424)
.-+|.+++|+|++..|++.+++.....-++.|++|++..+.. ...+ . +...+.+++++++..+.+.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 347999999999999998876532222356899999865431 2222 2 4567888888777555442
Q ss_pred ---------eccEEEEeecCCCceeEEEee------CCCCCeeEEEeecCCCCeEEE-eeccCCeEEEEeCCCCCCCCcc
Q psy3710 117 ---------EGLIKVYTFIQCPQQLHVFET------NPNPKGLCVLCPNSNNSLLAF-PGRKSGHVHLVDLADPERPPLD 180 (424)
Q Consensus 117 ---------~~~i~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~-~~~~dg~i~i~d~~~~~~~~~~ 180 (424)
++.+++|++......+..... ......+.+++|+|||+++++ +++.|+.|++||++++ +.+..
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-~~~~~ 172 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-TEKFE 172 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT-EEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-cEEEE
Confidence 678999998644433332221 112234678899999999865 3557999999999986 45555
Q ss_pred cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC
Q psy3710 181 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER 260 (424)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 260 (424)
+ .|.+.|.+++|+|+|+++++++.++ +++|+..+++.+....
T Consensus 173 ~-~~~~~V~~v~fspdg~~l~s~s~~~--~~~~~~~~~~~~~~~~----------------------------------- 214 (365)
T 4h5i_A 173 I-ETRGEVKDLHFSTDGKVVAYITGSS--LEVISTVTGSCIARKT----------------------------------- 214 (365)
T ss_dssp E-ECSSCCCEEEECTTSSEEEEECSSC--EEEEETTTCCEEEEEC-----------------------------------
T ss_pred e-CCCCceEEEEEccCCceEEecccee--EEEEEeccCcceeeee-----------------------------------
Confidence 5 4788999999999999999998665 7788877766543321
Q ss_pred CCeeeccCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEEECCCCcee----------------eeeccCCcEEEEEeC
Q psy3710 261 PPLDIAAHEAPLSCIALNQTGTRLATASYKG----TLIRVFDTGSGQKL----------------NELRRDSSYLCVSSD 320 (424)
Q Consensus 261 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~~i~iwd~~~~~~~----------------~~~~~~~~~l~~~~~ 320 (424)
...|...|.+++|+|+++++++++.|+ . +++|++..+... ..|+|+|++||+|+.
T Consensus 215 ----~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 215 ----DFDKNWSLSKINFIADDTVLIAASLKKGKGIV-LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp ----CCCTTEEEEEEEEEETTEEEEEEEESSSCCEE-EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred ----cCCCCCCEEEEEEcCCCCEEEEEecCCcceeE-EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 115777889999999999999988877 4 788887655321 136789999999999
Q ss_pred CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCC
Q psy3710 321 HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSK 396 (424)
Q Consensus 321 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~ 396 (424)
|++|+|||+.+++++... .+.|..+|+.++|+|||++|++|+.|++|+||+++.+
T Consensus 290 D~~V~iwd~~~~~~~~~~---------------------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIF---------------------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEETTTTEEEEEE---------------------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCEEEEEECCCCcEEEEe---------------------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999887764321 1346788999999999999999999999999999754
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.3e-37 Score=273.29 Aligned_cols=302 Identities=15% Similarity=0.212 Sum_probs=231.3
Q ss_pred ccccCCCeeeEEEecc---CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe------ecCCeEEEEecCC----ceE
Q psy3710 47 QDFTDGGLGHVEMLFR---CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE------FNAPVKGVRLRRD----KIV 113 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~---~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~----~~~ 113 (424)
...|.+.|.+++|+|+ ++.++++++ .++.|++||+.+++.+..+. +...|.+++|+|+ +.+
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~------~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATV------GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEE------ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEEC------CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCE
Confidence 3458899999999984 443333332 26799999999888877766 3467999999998 555
Q ss_pred EEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecC-CCCeEEEeeccCCeEEEEeCCCCCCCCccc---ccccC
Q psy3710 114 VVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNS-NNSLLAFPGRKSGHVHLVDLADPERPPLDI---AAHEA 186 (424)
Q Consensus 114 ~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~ 186 (424)
+++ |+.|++||+. +++.+..+..|.. .+.+++|+| ++.++++ |+.||.|++||++++ +....+ ..|..
T Consensus 88 l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~s-~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 88 LAVAGSRGIIRIINPI-TMQCIKHYVGHGN--AINELKFHPRDPNLLLS-VSKDHALRLWNIQTD-TLVAIFGGVEGHRD 162 (366)
T ss_dssp EEEEETTCEEEEECTT-TCCEEEEEESCCS--CEEEEEECSSCTTEEEE-EETTSCEEEEETTTT-EEEEEECSTTSCSS
T ss_pred EEEecCCCEEEEEEch-hceEeeeecCCCC--cEEEEEECCCCCCEEEE-EeCCCeEEEEEeecC-eEEEEecccccccC
Confidence 654 8999999996 7788888887764 488999999 8888887 999999999999986 555555 68999
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA 266 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~ 266 (424)
.|.+++|+|++++|++++.|+. |++||+++++....+.. ...+.|++..+.+.... . .........
T Consensus 163 ~v~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~ 228 (366)
T 3k26_A 163 EVLSADYDLLGEKIMSCGMDHS-LKLWRINSKRMMNAIKE---SYDYNPNKTNRPFISQK-----I-----HFPDFSTRD 228 (366)
T ss_dssp CEEEEEECTTSSEEEEEETTSC-EEEEESCSHHHHHHHHH---HHTCCGGGCSSCCCCEE-----E-----CCCSEEECS
T ss_pred ceeEEEECCCCCEEEEecCCCC-EEEEECCCCccccccce---eEEecCCCCccccccee-----e-----ccCcccccc
Confidence 9999999999999999999999 99999998876655443 22333433333221100 0 011123334
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce--------------eee------------eccC--CcEEEEE
Q psy3710 267 AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK--------------LNE------------LRRD--SSYLCVS 318 (424)
Q Consensus 267 ~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~--------------~~~------------~~~~--~~~l~~~ 318 (424)
.|...|.+++|+ +++|++++.|+. |++||+.+++. +.. |+|+ +++|+++
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~ 305 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG 305 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred CCcceEEEEEEc--CCEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence 699999999998 679999999999 99999987654 322 4567 9999999
Q ss_pred eCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeec--CCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 319 SDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIP--SDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 319 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+.||.|++||+.+++..... ...+..| ...+..++|+|++++|++++.||.|++|++.
T Consensus 306 ~~dg~i~vwd~~~~~~~~~~------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 306 NQVGKLYVWDLEVEDPHKAK------------------CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTSCEEEEECCSSSGGGCE------------------EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ecCCcEEEEECCCCCCcccc------------------ceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999987654311 1123334 5789999999999999999999999999985
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-37 Score=278.90 Aligned_cols=236 Identities=14% Similarity=0.129 Sum_probs=185.2
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcC--cccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPL--KEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
...|.++|++++|+|+|++||+|+.++ |++|++.++ +.......|.+.|.+++|+|+++++++++ .|++|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-------~d~~v 79 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-------QDRNA 79 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-------TTSSE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-------CCCeE
Confidence 344778999999999999999998888 999999887 56666777899999999999999999998 68999
Q ss_pred EEEECCCCc---EEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCc---eeEEEee-CCCCCeeEEEeecC
Q psy3710 83 MIWDDLKKQ---VVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQ---QLHVFET-NPNPKGLCVLCPNS 151 (424)
Q Consensus 83 ~iwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~ 151 (424)
++||+.+++ ....+. |...|.+++|+|++..+++ |+.|++||++ ..+ ....+.. |. ..+.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~h~--~~v~~~~~~~ 156 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE-QENDWWVSKHLKRPLR--STILSLDWHP 156 (377)
T ss_dssp EEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCC--SCEEEEEECT
T ss_pred EEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC-CcccceeeeEeecccC--CCeEEEEEcC
Confidence 999999877 444444 8899999999999866665 8999999997 443 3556655 54 4588999999
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCC-----------------CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEE
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPE-----------------RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 214 (424)
++++|++ |+.|+.|++||+.... .....+ +|...|.+++|+|++++|++++.|+. |++||
T Consensus 157 ~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd 233 (377)
T 3dwl_C 157 NNVLLAA-GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAY 233 (377)
T ss_dssp TSSEEEE-EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CE
T ss_pred CCCEEEE-EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEE
Confidence 9999998 9999999999986321 223344 89999999999999999999999999 99999
Q ss_pred CCCcce----eeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCC
Q psy3710 215 TGSGQK----LNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 215 ~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 256 (424)
+++++. +..+..+ +..++++|++..++ +|+.++.+ +|+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLSQLPLRSLLWANESAIVA-AGYNYSPI-LLQGN 280 (377)
T ss_dssp ECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE-EESSSSEE-EECCC
T ss_pred CCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE-EEcCCcEE-EEEeC
Confidence 999887 6666654 67889999987554 46655555 77665
No 80
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-36 Score=267.96 Aligned_cols=282 Identities=15% Similarity=0.124 Sum_probs=207.1
Q ss_pred CCceEEEEECCCCCeeEeecCC--------eEEEEeCCcCccccc----------ccccCCCeeeEEEeccCceEEEEeC
Q psy3710 10 KNGLLYAGFNQDQGCFACGMED--------GFRIYNCDPLKEKER----------QDFTDGGLGHVEMLFRCNYLALVGG 71 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~--------~i~iw~~~~~~~~~~----------~~~~~~~i~~~~~~~~~~~l~~~~~ 71 (424)
.-||++++|+|||++|++|+.+ .|++|+++....... ...|...+ +++.++++.+++...
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v--~s~~~~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSP--TAIDASKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCC--CEEEEETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCce--EEEEeCCCEEEEEEC
Confidence 4589999999999999987532 299999876544211 12234445 445667777665432
Q ss_pred CcC----CCcCCCeEEEEECCCCcEE-EEE---e------ecCCeEEEEecCCceEEE--e---eccEEEEeecCCCcee
Q psy3710 72 GTH----PKYPNNRVMIWDDLKKQVV-ICL---E------FNAPVKGVRLRRDKIVVV--L---EGLIKVYTFIQCPQQL 132 (424)
Q Consensus 72 ~~~----~~~~d~~i~iwd~~~~~~~-~~~---~------~~~~v~~~~~~~~~~~~~--~---~~~i~v~~~~~~~~~~ 132 (424)
... ....|+.+++|++.+.... ... . +...+.+++|+||+.+++ + |+.|++||+. +.+.+
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~-~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS-DLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT-TTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC-CCcEE
Confidence 110 0114789999997654322 211 1 123588999999997654 3 7899999996 77777
Q ss_pred EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCC-cccccccCCeEEEEEccCCCEEEEEecCC----
Q psy3710 133 HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP-LDIAAHEAPLSCIALNQTGTRLATASYKG---- 207 (424)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 207 (424)
..+. +. ..+.+++|+|+++++++ ++. +.+.+|+..++.... .....|...|.+++|+|+++.+++++.|+
T Consensus 171 ~~~~-~~--~~V~~v~fspdg~~l~s-~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 171 FEIE-TR--GEVKDLHFSTDGKVVAY-ITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp EEEE-CS--SCCCEEEECTTSSEEEE-ECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred EEeC-CC--CceEEEEEccCCceEEe-ccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 7775 33 34788999999999997 665 456666666552222 24557889999999999999999999887
Q ss_pred cEEEEEECCCccee----eEEec---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCC
Q psy3710 208 TLIRVFDTGSGQKL----NELRR---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 280 (424)
Q Consensus 208 ~~i~iwd~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 280 (424)
. +++|++...... ..+.. .+.+++++|++..++. |+.|++|++||+++++.....+.+|..+|++++|+||
T Consensus 246 ~-i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las-gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 246 V-LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL-ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp E-EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE-EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred E-EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE-EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC
Confidence 5 888998766432 23333 3788999999987665 9999999999999877544446799999999999999
Q ss_pred CCEEEEEeCCCcEEEEEECCCC
Q psy3710 281 GTRLATASYKGTLIRVFDTGSG 302 (424)
Q Consensus 281 ~~~l~~~~~d~~~i~iwd~~~~ 302 (424)
|++||++|.|++ |||||+...
T Consensus 324 g~~laS~S~D~t-vrvw~ip~~ 344 (365)
T 4h5i_A 324 STYVASVSAANT-IHIIKLPLN 344 (365)
T ss_dssp SCEEEEEETTSE-EEEEECCTT
T ss_pred CCEEEEEeCCCe-EEEEEcCCC
Confidence 999999999999 999998643
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.8e-36 Score=273.68 Aligned_cols=278 Identities=12% Similarity=0.197 Sum_probs=216.6
Q ss_pred cccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc-----------cccccccC------------CCeeeEEEecc
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE-----------KERQDFTD------------GGLGHVEMLFR 62 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~-----------~~~~~~~~------------~~i~~~~~~~~ 62 (424)
..|.+.|++++|+|+|++||+|+.++ |+||++.+++. ......|. +.|..++|+|+
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 35789999999999999999999988 99999987662 33344566 78999999999
Q ss_pred C--ceEEEEeCCcCCCcCCCeEEEEECCCCcEE---------------------------------------EEE--eec
Q psy3710 63 C--NYLALVGGGTHPKYPNNRVMIWDDLKKQVV---------------------------------------ICL--EFN 99 (424)
Q Consensus 63 ~--~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~---------------------------------------~~~--~~~ 99 (424)
+ ..+++++ .|++|++||+.+++.. ..+ .|.
T Consensus 105 ~~~~~l~s~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 105 KNAAQFLLST-------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp CSSSEEEEEE-------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred CCcceEEEeC-------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 8 6788777 5899999998765442 122 278
Q ss_pred CCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEE-------eeCCCCCeeEEEeecCCC-CeEEEeeccCCeEEEE
Q psy3710 100 APVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVF-------ETNPNPKGLCVLCPNSNN-SLLAFPGRKSGHVHLV 169 (424)
Q Consensus 100 ~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~l~~~~~~dg~i~i~ 169 (424)
..|.+++|+|++.++++ |+.|++||+....+.+..+ ..|. ..+.+++|+|++ .++++ |+.||.|++|
T Consensus 178 ~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~s-~~~dg~i~iw 254 (447)
T 3dw8_B 178 YHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELT--EVITAAEFHPNSCNTFVY-SSSKGTIRLC 254 (447)
T ss_dssp SCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCC--CCEEEEEECSSCTTEEEE-EETTSCEEEE
T ss_pred cceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccC--cceEEEEECCCCCcEEEE-EeCCCeEEEE
Confidence 89999999999987776 8999999996333444322 2333 458899999998 78887 9999999999
Q ss_pred eCCCCCCC----CcccccccC------------CeEEEEEccCCCEEEEEecCCcEEEEEECCC-cceeeEEecce----
Q psy3710 170 DLADPERP----PLDIAAHEA------------PLSCIALNQTGTRLATASYKGTLIRVFDTGS-GQKLNELRRGL---- 228 (424)
Q Consensus 170 d~~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~-~~~~~~~~~~~---- 228 (424)
|++++ .. ...+..|.. .|.+++|+|++++|++++. +. |++||+++ ++++..+..+.
T Consensus 255 d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 255 DMRAS-ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp ETTTC-SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEESCGGGTT
T ss_pred ECcCC-ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeeccccccc
Confidence 99986 33 566777775 8999999999999999998 98 99999997 88887777552
Q ss_pred --------------eeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCee------------------------------
Q psy3710 229 --------------CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLD------------------------------ 264 (424)
Q Consensus 229 --------------~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~------------------------------ 264 (424)
..++++|++..+ ++|+.||.|++||+.+++.....
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred cccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccc
Confidence 127899998887 55999999999999876531100
Q ss_pred -eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 265 -IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 265 -~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
...+...|..++|+|++++||+++.++ +.+|..+
T Consensus 411 ~~~~~~~~i~~~~~~p~~~~la~~~~~~--~~~~~~~ 445 (447)
T 3dw8_B 411 DSLDFNKKILHTAWHPKENIIAVATTNN--LYIFQDK 445 (447)
T ss_dssp GGCCTTSCCCEEEECSSSSEEEEECSSC--EEEEECC
T ss_pred cccccCCceeEEEECCCCCEEEEEecce--eeeeccc
Confidence 012345788899999999999888887 7888654
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-35 Score=265.13 Aligned_cols=263 Identities=14% Similarity=0.223 Sum_probs=218.6
Q ss_pred EEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe--ecCCeEEEEecCCceEEEe---eccEEEEeecCCCcee
Q psy3710 58 EMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQL 132 (424)
Q Consensus 58 ~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~ 132 (424)
.+.++++.+++++ .|+.|++||+.+++....+. +...|.+++|+|++.++++ +|.|++||+. .++.+
T Consensus 98 ~~~~s~~~l~~~~-------~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~ 169 (401)
T 4aez_A 98 LLDWSNLNVVAVA-------LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-SQTKL 169 (401)
T ss_dssp CEEECTTSEEEEE-------ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEE
T ss_pred EEeecCCCEEEEE-------CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-CCeEE
Confidence 3444556677776 48999999999999988777 5789999999999977765 8999999996 77788
Q ss_pred EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEE
Q psy3710 133 HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRV 212 (424)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~i 212 (424)
..+..|... +.+++| ++..+++ |+.||.|++||++........+.+|...|.+++|+|++++|++++.|+. |++
T Consensus 170 ~~~~~~~~~--v~~~~~--~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-v~i 243 (401)
T 4aez_A 170 RTMAGHQAR--VGCLSW--NRHVLSS-GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV-VQI 243 (401)
T ss_dssp EEECCCSSC--EEEEEE--ETTEEEE-EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC-EEE
T ss_pred EEecCCCCc--eEEEEE--CCCEEEE-EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe-EEE
Confidence 888877644 777888 4567887 9999999999999655677788899999999999999999999999999 999
Q ss_pred EECCCcceeeEEecc---eeeeeecCCCCeEEEEee--cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEE
Q psy3710 213 FDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGR--KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 213 wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 287 (424)
||+++++.+..+..+ +..++++|++..++++++ .|+.|++||+.+++. ...+ .+...|.+++|+|++++++++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~-~~~~-~~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR-VNTV-DAGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-EEEE-ECSSCEEEEEECSSSSEEEEE
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-EEEE-eCCCcEEEEEECCCCCeEEEE
Confidence 999999888887644 788999999988888866 899999999998763 3333 477889999999999999995
Q ss_pred e--CCCcEEEEEECCCCceee--------------eeccCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 288 S--YKGTLIRVFDTGSGQKLN--------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 288 ~--~d~~~i~iwd~~~~~~~~--------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
+ .|+. |++||+.+++... .|+|++++|++++.||.|++|++.+++.+.+
T Consensus 322 ~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 322 HGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp ECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred eecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 4 8999 9999999865443 2568999999999999999999999877654
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7e-35 Score=264.76 Aligned_cols=264 Identities=16% Similarity=0.213 Sum_probs=219.2
Q ss_pred eEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcc
Q psy3710 102 VKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLD 180 (424)
Q Consensus 102 v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~ 180 (424)
++.++|++++.+.+. |++|+|||.. +++....+..+.+...|.+++|+|++++|++ |+.||.|++||+.++ +.+..
T Consensus 108 ~~~l~wS~~n~lAvgld~tV~lWd~~-tg~~~~~~~~~~~~~~V~sv~fspdg~~las-gs~Dg~v~iWd~~~~-~~~~~ 184 (420)
T 4gga_A 108 LNLVDWSSGNVLAVALDNSVYLWSAS-SGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQ-KRLRN 184 (420)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETT-TCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTT-EEEEE
T ss_pred ceeEEECCCCEEEEEeCCEEEEEECC-CCCEEEEEEecCCCCcEEEEEECCCCCEEEE-EECCCeEEEEEcCCC-cEEEE
Confidence 567999988754443 9999999996 7888888877666677999999999999998 999999999999987 77788
Q ss_pred cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcc-eeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCC
Q psy3710 181 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ-KLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 256 (424)
+.+|...+.+++++ +..+++++.|+. +++||..... .+..+..+ +..+.+.+++..++. ++.|+.+++||..
T Consensus 185 ~~~h~~~v~~~s~~--~~~l~sgs~d~~-i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s-~~~D~~v~i~~~~ 260 (420)
T 4gga_A 185 MTSHSARVGSLSWN--SYILSSGSRSGH-IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS-GGNDNLVNVWPSA 260 (420)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSE-EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEESS
T ss_pred EeCCCCceEEEeeC--CCEEEEEeCCCc-eeEeeecccceeeEEecccccceeeeeecCCCCeeee-eeccccceEEeec
Confidence 89999999998875 579999999999 9999998754 44555544 667788888876665 9999999999998
Q ss_pred CCCC---CCeeeccCCCCeEEEEEcCCCC-EEEE--EeCCCcEEEEEECCCCceeee-----------eccCCcEEEEEe
Q psy3710 257 DPER---PPLDIAAHEAPLSCIALNQTGT-RLAT--ASYKGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSS 319 (424)
Q Consensus 257 ~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~ 319 (424)
.++. .......|...|.+++|+|++. .+++ |+.|+. |++||+.+++++.. +.++++.+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 7653 3455678999999999999654 5554 457999 99999999988775 457888887765
Q ss_pred --CCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 320 --DHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 320 --~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
.|+.|+|||+.+++++. .+..|.+.|+.++|+|||++|++|+.||+|++|++.+
T Consensus 340 g~~d~~I~iwd~~~~~~v~----------------------~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVA----------------------ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CTTTCCEEEEETTTCCEEE----------------------EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ecCCCEEEEEECCCCcEEE----------------------EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 78999999999877643 3556778899999999999999999999999999974
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.8e-34 Score=264.64 Aligned_cols=275 Identities=16% Similarity=0.248 Sum_probs=211.7
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe--eccEEEE
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL--EGLIKVY 123 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~--~~~i~v~ 123 (424)
...|...+.. ++.++++++++++ .|++|++||+.+++.+..+. |.+.|.+++|+|++.++.. |+.|++|
T Consensus 117 l~~h~~~v~~-~~~~~~~~l~sgs-------~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 117 LRGHMTSVIT-CLQFEDNYVITGA-------DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVW 188 (464)
T ss_dssp EECCSSSCEE-EEEEETTEEEEEE-------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEE
T ss_pred EcCCCCCcEE-EEEECCCEEEEEc-------CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEE
Confidence 4456665422 4555788888888 68999999999999999998 8999999999999854444 8999999
Q ss_pred eecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCC----------------------Cccc
Q psy3710 124 TFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP----------------------PLDI 181 (424)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~----------------------~~~~ 181 (424)
|+. +++.+..+..|........+.+.+++.++++ |+.||.|++||+.+.... ...+
T Consensus 189 d~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s-~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 189 DIK-KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT-GSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp ETT-TTEEEEEECCCSSCEEEEEEEESSSCEEEEE-EETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred ECC-CCcEEEEECCCCCccEEEEEecCCCCCEEEE-EcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 997 7788888888876643334444478888888 999999999999875322 2234
Q ss_pred ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC
Q psy3710 182 AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP 261 (424)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 261 (424)
.+|...+.++ +++++++++++.|+. |++||+++++.+..
T Consensus 267 ~~~~~~v~~~--~~~~~~l~~~~~d~~-i~vwd~~~~~~~~~-------------------------------------- 305 (464)
T 3v7d_B 267 RGHMASVRTV--SGHGNIVVSGSYDNT-LIVWDVAQMKCLYI-------------------------------------- 305 (464)
T ss_dssp CCCSSCEEEE--EEETTEEEEEETTSC-EEEEETTTTEEEEE--------------------------------------
T ss_pred cCccceEEEE--cCCCCEEEEEeCCCe-EEEEECCCCcEEEE--------------------------------------
Confidence 4555555555 345566666666666 66666665554333
Q ss_pred CeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec----------cCCcEEEEEeCCCcEEEEEccc
Q psy3710 262 PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR----------RDSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 262 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~----------~~~~~l~~~~~d~~i~iw~~~~ 331 (424)
+.+|...|.+++|+|+++++++++.|+. |++||+++++++.++. .++++|++++.||.|++||+.+
T Consensus 306 ---~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 306 ---LSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp ---ECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred ---ecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCC
Confidence 3378899999999999999999999999 9999999999888764 3578999999999999999988
Q ss_pred cccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceee
Q psy3710 332 AQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWR 401 (424)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~ 401 (424)
++.... ..+...+..++|+|++++|++++ ||.|++|++. ++++++
T Consensus 382 ~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~-~g~~~~ 426 (464)
T 3v7d_B 382 YSRKFS-----------------------YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR-SGKLVH 426 (464)
T ss_dssp CCEEEE-----------------------EECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT-TCCEEE
T ss_pred Cceeee-----------------------ecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC-CCcEEe
Confidence 653211 11345567889999999999988 9999999998 566655
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.1e-36 Score=262.00 Aligned_cols=246 Identities=13% Similarity=0.137 Sum_probs=191.0
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc--cccccccCCCeeeEEEecc--CceEEEEeCCcCCCcCCC
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE--KERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNN 80 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~--~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~~~~d~ 80 (424)
+.+|.+.|++++|+|+|++||+|+.|+ |+|||+.+++. ......|.+.|.+++|+++ ++.+++++ .|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s-------~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS-------YDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE-------TTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE-------CCC
Confidence 679999999999999999999999988 99999987653 3445678999999999864 78888888 689
Q ss_pred eEEEEECCCCc--EEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCCce--eEEEeeCCCCCeeEEEeec
Q psy3710 81 RVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCPQQ--LHVFETNPNPKGLCVLCPN 150 (424)
Q Consensus 81 ~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 150 (424)
+|++||+++++ ....+. |...|.+++|+|+ +.++++ |+.|++|+++..... ...+..|. ..+.+++|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~--~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT--IGCNAVSWA 159 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS--SCBCCCEEC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc--CCcceEEEc
Confidence 99999998874 555555 8899999999997 655554 899999999632221 22333444 346667787
Q ss_pred CC-----------------CCeEEEeeccCCeEEEEeCCCCC--CCCcccccccCCeEEEEEccCC----CEEEEEecCC
Q psy3710 151 SN-----------------NSLLAFPGRKSGHVHLVDLADPE--RPPLDIAAHEAPLSCIALNQTG----TRLATASYKG 207 (424)
Q Consensus 151 ~~-----------------~~~l~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~ 207 (424)
|+ +++|++ |+.|+.|++||++... .....+.+|...|.+++|+|++ ++|++++.|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFAS-GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEEC-CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cccCCccccccccccCccccceEEE-ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 76 367777 9999999999997532 2455788999999999999986 7899999999
Q ss_pred cEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEE
Q psy3710 208 TLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 287 (424)
+ |++||+++.... ......+..|...|.+++|+|++++|+++
T Consensus 239 ~-v~iw~~~~~~~~-------------------------------------~~~~~~~~~~~~~v~~v~~sp~g~~las~ 280 (316)
T 3bg1_A 239 R-VFIWTCDDASSN-------------------------------------TWSPKLLHKFNDVVWHVSWSITANILAVS 280 (316)
T ss_dssp E-EEEEECSSTTCC-------------------------------------CCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred e-EEEEEccCcccc-------------------------------------chhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence 9 999998753210 00011223678899999999999999999
Q ss_pred eCCCcEEEEEECC
Q psy3710 288 SYKGTLIRVFDTG 300 (424)
Q Consensus 288 ~~d~~~i~iwd~~ 300 (424)
+.|+. |++|+..
T Consensus 281 ~~D~~-v~lw~~~ 292 (316)
T 3bg1_A 281 GGDNK-VTLWKES 292 (316)
T ss_dssp ESSSC-EEEEEEC
T ss_pred cCCCe-EEEEEEC
Confidence 99999 9999976
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-34 Score=264.53 Aligned_cols=291 Identities=16% Similarity=0.267 Sum_probs=233.7
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEe
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYT 124 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~ 124 (424)
...|.+.+.. ++.++++++++++ .|++|++||+.+++.+..+. |...|.+++++++..+.++ |+.|++||
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~-------~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGS-------DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWN 185 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEE-------TTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ecccCCCcEE-EEEEcCCEEEEEE-------CCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEE
Confidence 4456665432 4667899999888 68999999999999999888 8999999999966444444 89999999
Q ss_pred ecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe
Q psy3710 125 FIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
+. +++.+..+..|... +.++.++ ++.+++ |+.||.|++||+.++ +....+.+|...|.+++| +++++++++
T Consensus 186 ~~-~~~~~~~~~~h~~~--v~~~~~~--~~~l~s-~s~dg~i~~wd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 186 AE-TGECIHTLYGHTST--VRCMHLH--EKRVVS-GSRDATLRVWDIETG-QCLHVLMGHVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp TT-TTEEEEEECCCSSC--EEEEEEE--TTEEEE-EETTSEEEEEESSSC-CEEEEEECCSSCEEEEEE--CSSCEEEEE
T ss_pred CC-cCcEEEEECCCCCc--EEEEEec--CCEEEE-EeCCCEEEEEECCCC-cEEEEEcCCcccEEEEEE--CCCEEEEEc
Confidence 96 77888888877654 7777774 567777 999999999999986 677788899999999998 678999999
Q ss_pred cCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEE
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL 284 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 284 (424)
.|+. |++||+++++.+..+. +|...|.+++| ++.++
T Consensus 257 ~dg~-i~iwd~~~~~~~~~~~-----------------------------------------~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 257 YDFM-VKVWDPETETCLHTLQ-----------------------------------------GHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp TTSC-EEEEEGGGTEEEEEEC-----------------------------------------CCSSCEEEEEE--CSSEE
T ss_pred CCCE-EEEEECCCCcEeEEec-----------------------------------------CCCCceEEEEE--CCCEE
Confidence 9999 9999998876654443 67888999998 78899
Q ss_pred EEEeCCCcEEEEEECCCCceeeeec----------cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCC
Q psy3710 285 ATASYKGTLIRVFDTGSGQKLNELR----------RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSS 354 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~~~~~~~~----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (424)
++++.|+. |++||+++++.+..+. ++++++++++.||.|++||+.+++.+......
T Consensus 293 ~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------------- 358 (445)
T 2ovr_B 293 VSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP------------- 358 (445)
T ss_dssp EEEETTSC-EEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECST-------------
T ss_pred EEEeCCCe-EEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccC-------------
Confidence 99999999 9999999998877653 46789999999999999999987765432210
Q ss_pred ceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeeee----------ehhhheecCCCceeeEEE
Q psy3710 355 WSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDV----------YIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~----------~~~~~~~~~d~~~l~~~~ 421 (424)
..|...+..++|+ +++|++++.||.|++|++. .++.++.. ....+.++|++.+++++.
T Consensus 359 ------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 359 ------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK-TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp ------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT-TCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred ------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC-CCceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 0144567777774 6899999999999999998 55555433 244678999999998864
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-34 Score=250.79 Aligned_cols=266 Identities=17% Similarity=0.216 Sum_probs=217.4
Q ss_pred cEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeE
Q psy3710 91 QVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHV 166 (424)
Q Consensus 91 ~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i 166 (424)
+....+. |.+.|.+++| +++..+++ ||.|++||+. ..+....+..+.. .+.+++|+|+++++++ |+.||.|
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~dg~i 83 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD-DQWLGTVVYTGQG--FLNSVCYDSEKELLLF-GGKDTMI 83 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES-SSEEEEEEEECSS--CEEEEEEETTTTEEEE-EETTSCE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC-CCEEEEEeecCCc--cEEEEEECCCCCEEEE-ecCCCeE
Confidence 5566676 8999999999 77655554 8999999996 7777777777764 4889999999999998 9999999
Q ss_pred EEEeCCCCC--CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEE
Q psy3710 167 HLVDLADPE--RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLA 241 (424)
Q Consensus 167 ~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 241 (424)
++|++.... +....+.+|...|.+++| +++++++++.|+. |++|| .++....+..+ +..+++.|.....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKT-AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSE-EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCC-EEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 999987652 446678899999999999 5689999999999 99999 55666666543 66778888555556
Q ss_pred EEeecCCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee------------
Q psy3710 242 FPGRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL------------ 308 (424)
Q Consensus 242 ~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~------------ 308 (424)
++++.||.|++||... ....+.. |...+.+++|+|++. +++++.|+. |++||+++++.+..+
T Consensus 159 ~~~~~d~~i~i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 159 LTASADKTIKLWQNDK---VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEEETTSCEEEEETTE---EEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEEECCCCEEEEecCc---eEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhcCCceEEEEEE
Confidence 6699999999999432 3344444 899999999999998 999999999 999999999887754
Q ss_pred ccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcE
Q psy3710 309 RRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSY 388 (424)
Q Consensus 309 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v 388 (424)
+|++ .+++++.||.|++||+.+++.+. .+..|..++..++|+|+++ +++++.||.|
T Consensus 234 ~~~~-~l~~~~~dg~v~iwd~~~~~~~~----------------------~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 234 LPNG-DIVSCGEDRTVRIWSKENGSLKQ----------------------VITLPAISIWSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp CTTS-CEEEEETTSEEEEECTTTCCEEE----------------------EEECSSSCEEEEEECTTSC-EEEEETTSCE
T ss_pred ecCC-CEEEEecCCEEEEEECCCCceeE----------------------EEeccCceEEEEEEccCCC-EEEEeCCCcE
Confidence 4677 68999999999999999876533 2445667899999999998 6679999999
Q ss_pred EEEEecC
Q psy3710 389 YKFMFNS 395 (424)
Q Consensus 389 ~~~~~~~ 395 (424)
++|++..
T Consensus 290 ~iw~~~~ 296 (313)
T 3odt_A 290 RIFSQEK 296 (313)
T ss_dssp EEEESCG
T ss_pred EEEeCCC
Confidence 9999973
No 88
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=251.65 Aligned_cols=265 Identities=15% Similarity=0.221 Sum_probs=215.4
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEeecC
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQ 127 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~ 127 (424)
...++|++++ .|+++. |++|+|||+.+++.++.+. |...|.+++|+|++.++++ |+.|++|+++
T Consensus 28 ~~~l~WS~~~-~lAvg~--------D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~- 97 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL--------DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ- 97 (318)
T ss_dssp CBCEEECTTS-EEEEEE--------TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-
T ss_pred ceEEEECCCC-EEEEEe--------CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-
Confidence 3568999775 555443 8999999999999998876 5678999999999988776 8999999997
Q ss_pred CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCC
Q psy3710 128 CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 207 (424)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 207 (424)
+++.+..+..|... +.++. +++..+++ |+.++.+++|+.......+..+.+|...+..+.++++++++++++.|+
T Consensus 98 ~~~~~~~~~~h~~~--~~~~~--~~~~~l~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 98 QQKRLRNMTSHSAR--VGSLS--WNSYILSS-GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp TTEEEEEEECCSSC--EEEEE--EETTEEEE-EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CceeEEEecCccce--EEEee--cCCCEEEE-EecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 78888888887744 44444 45677887 999999999999887666778889999999999999999999999999
Q ss_pred cEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCE---E
Q psy3710 208 TLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR---L 284 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l 284 (424)
. |++||+++++.... .......|...|.+++++|++.. +
T Consensus 173 ~-i~iwd~~~~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 173 L-VNVWPSAPGEGGWV-------------------------------------PLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp C-EEEEESSCBTTBSC-------------------------------------CSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred c-eeEEECCCCccccc-------------------------------------ceeeecccCCceEEEEecCCCCcEEEE
Confidence 9 99999987653221 12223367788999999987653 3
Q ss_pred EEEeCCCcEEEEEECCCCceeee-----------eccCCcEEEEEe--CCCcEEEEEccccccccccccceeeeccCccc
Q psy3710 285 ATASYKGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSS--DHGTVHVFSVDEAQKINKQSSLASASFLPKYF 351 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 351 (424)
++++.++. |++||......... +.++++.+++++ .|+.|+|||+.+++++..
T Consensus 215 ~~~~~~~~-i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~-------------- 279 (318)
T 4ggc_A 215 GGGTSDRH-IRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE-------------- 279 (318)
T ss_dssp EECTTTCE-EEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE--------------
T ss_pred EecCCCCE-EEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEE--------------
Confidence 46677888 99999988776553 457777777654 799999999998776433
Q ss_pred cCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 352 SSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+..|.+.|+.++|+||+++|++|+.||+|++|++.
T Consensus 280 --------l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 280 --------LKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp --------ECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred --------EcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 45677889999999999999999999999999986
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.8e-36 Score=268.79 Aligned_cols=240 Identities=10% Similarity=0.073 Sum_probs=189.4
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC--cEEEEEe-ecCCeEEEEecCCceEEEe---eccE
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK--QVVICLE-FNAPVKGVRLRRDKIVVVL---EGLI 120 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~--~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i 120 (424)
+..+.+.|.+++|+|+++++++++ .|+.|++||+.++ +.+..+. |...|.+++|+|++.++++ |+.|
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~-------~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTT-------ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNA 79 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCC-------SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSE
T ss_pred EecCCCcEEEEEECCCCCEEEEec-------CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeE
Confidence 344578899999999999998876 5899999999988 5666666 8899999999999877765 8999
Q ss_pred EEEeecCCCc---eeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC--CCccccc-ccCCeEEEEEc
Q psy3710 121 KVYTFIQCPQ---QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER--PPLDIAA-HEAPLSCIALN 194 (424)
Q Consensus 121 ~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~--~~~~~~~-~~~~v~~~~~~ 194 (424)
++||+. .++ ....+..|. ..+.+++|+|++++|++ |+.|+.|++||++.+.. ....+.. |...|.+++|+
T Consensus 80 ~vwd~~-~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 80 YVYEKR-PDGTWKQTLVLLRLN--RAATFVRWSPNEDKFAV-GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp EEC-------CCCCEEECCCCS--SCEEEEECCTTSSCCEE-EESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC
T ss_pred EEEEcC-CCCceeeeeEecccC--CceEEEEECCCCCEEEE-EecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc
Confidence 999997 444 444455554 55899999999999998 99999999999998632 4566777 99999999999
Q ss_pred cCCCEEEEEecCCcEEEEEECCC------------------cceeeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEe
Q psy3710 195 QTGTRLATASYKGTLIRVFDTGS------------------GQKLNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVD 254 (424)
Q Consensus 195 ~~~~~l~~~~~d~~~i~iwd~~~------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d 254 (424)
|++++|++++.|+. |++||++. ++++..+. ..+..++++|++..++. ++.||.|++||
T Consensus 156 ~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~iwd 233 (377)
T 3dwl_C 156 PNNVLLAAGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAY-AGHDSSVTIAY 233 (377)
T ss_dssp TTSSEEEEEESSSC-EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEE-EETTTEEC-CE
T ss_pred CCCCEEEEEeCCCE-EEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEE-EeCCCcEEEEE
Confidence 99999999999999 99999852 34444441 22778899999886665 89999999999
Q ss_pred CCCCCCC---CeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCC
Q psy3710 255 LADPERP---PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 255 ~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~ 301 (424)
+.+++.+ ...+..|..+|.+++|+|++++|++++.++. .+|+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~--~~~~~~~ 281 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP--ILLQGNE 281 (377)
T ss_dssp ECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE--EEECCCC
T ss_pred CCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE--EEEEeCC
Confidence 9988753 5567799999999999999999999987774 5777653
No 90
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.1e-35 Score=259.59 Aligned_cols=291 Identities=13% Similarity=0.166 Sum_probs=208.8
Q ss_pred cccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc----cccccccCCCeeeEEEec--cCceEEEEeCCcCCCc
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE----KERQDFTDGGLGHVEMLF--RCNYLALVGGGTHPKY 77 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~----~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~~~ 77 (424)
.+.+|.+.|++++|+|++++||+|+.++ |++||+.+... ......|.+.|.+++|+| +++++++++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~------- 78 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS------- 78 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-------
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-------
Confidence 3789999999999999999999999988 99999987643 333456899999999999 588888888
Q ss_pred CCCeEEEEECCCC---------cEEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCCceeEEEe------
Q psy3710 78 PNNRVMIWDDLKK---------QVVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCPQQLHVFE------ 136 (424)
Q Consensus 78 ~d~~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~~~~~~~~------ 136 (424)
.|+.|++||+.++ +.+..+. |...|.+++|+|+ +.++++ |+.|++||++ ..+.+..+.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL-EPSDLRSWTLTSEMK 157 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS-STTCTTCCEEEEEEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC-ChHHhcccccccccc
Confidence 6899999999887 4566665 7899999999998 766654 8999999996 443332221
Q ss_pred -----eCCCCCeeEEEeecCC---CCeEEEeeccCCeEEEEeCCCCCCC--CcccccccCCeEEEEEccCC----CEEEE
Q psy3710 137 -----TNPNPKGLCVLCPNSN---NSLLAFPGRKSGHVHLVDLADPERP--PLDIAAHEAPLSCIALNQTG----TRLAT 202 (424)
Q Consensus 137 -----~~~~~~~~~~~~~~~~---~~~l~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~----~~l~~ 202 (424)
.......+.++.++|+ +..+++ ++.++.+.+|+...+ .. ...+.+|...|.+++|+|++ ++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~-~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAV-SALEQAIIYQRGKDG-KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEE-EETTEEEEEEECTTS-CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEE-ecCCCcEEEEccCCC-ceeeeeecCCCCcceeEEEECCCCCCcceEEEE
Confidence 1123345788999997 888887 999999988887764 32 55677899999999999998 89999
Q ss_pred EecCCcEEEEEECCCcceeeEEecceee---eeecCCCCeEEE---EeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEE
Q psy3710 203 ASYKGTLIRVFDTGSGQKLNELRRGLCV---LCPNSNNSLLAF---PGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIA 276 (424)
Q Consensus 203 ~~~d~~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 276 (424)
++.|+. |++||++.+............ ....+....... .+.....+.+|+....+ ....+.+|...|++++
T Consensus 236 ~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 236 GCKDGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVE-LLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EETTSC-EEEEEEEECC---------------------------------------CCSEEEE-EEEEECTTSSCEEEEE
T ss_pred EcCCCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccccc-EEEEEecccccEEEEE
Confidence 999999 999999877554443332211 111111111111 12223334444433322 3455678999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 277 LNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 277 ~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
|+|++++|++++.||. |++|++.+++.+..+
T Consensus 314 ~s~~~~~l~s~~~dg~-v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGK-VRLWKATYSNEFKCM 344 (351)
T ss_dssp ECSSSCCEEEEETTSC-EEEEEECTTSCEEEE
T ss_pred EcCCCCEEEEecCCCc-EEEEecCcCcchhhe
Confidence 9999999999999999 999999988665543
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.2e-34 Score=247.82 Aligned_cols=242 Identities=14% Similarity=0.206 Sum_probs=191.2
Q ss_pred EEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCC-CCCCcccccccCCeEEEEEcc--CCCEEEEEecCCcEE
Q psy3710 134 VFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP-ERPPLDIAAHEAPLSCIALNQ--TGTRLATASYKGTLI 210 (424)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~~i 210 (424)
.+.+|. ..+.+++|+|++++|++ |+.|+.|++||+... .+.+..+.+|.++|.+++|+| ++++|++++.|++ |
T Consensus 4 ~~~~h~--~~V~~~~~s~~g~~las-~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~-v 79 (297)
T 2pm7_B 4 IANAHN--EMIHDAVMDYYGKRMAT-CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK-V 79 (297)
T ss_dssp ECCSCS--SCEEEEEECTTSSEEEE-EETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE-E
T ss_pred eccCCc--CceEEEEECCCCCEEEE-EeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE-E
Confidence 344555 44889999999999998 999999999999753 256778899999999999986 3899999999999 9
Q ss_pred EEEECCCcc--eeeEEec---ceeeeeecCCC-CeEEEEeecCCeEEEEeCCCCCC-CCeeeccCCCCeEEEEEcCC---
Q psy3710 211 RVFDTGSGQ--KLNELRR---GLCVLCPNSNN-SLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQT--- 280 (424)
Q Consensus 211 ~iwd~~~~~--~~~~~~~---~~~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~--- 280 (424)
++||+++++ .+..+.. .+..++++|+. ..++++++.|+.|++||+++... ....+.+|...|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998874 4444543 37889999973 45566799999999999987642 24566799999999999997
Q ss_pred ----------CCEEEEEeCCCcEEEEEECCCCc----eee------------eeccC---CcEEEEEeCCCcEEEEEccc
Q psy3710 281 ----------GTRLATASYKGTLIRVFDTGSGQ----KLN------------ELRRD---SSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 281 ----------~~~l~~~~~d~~~i~iwd~~~~~----~~~------------~~~~~---~~~l~~~~~d~~i~iw~~~~ 331 (424)
+++|++++.|+. |++||+++++ ... .|+|+ +.+|++++.|++|+|||+.+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ----------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 579999999999 9999998765 332 25677 48999999999999999977
Q ss_pred cccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCc
Q psy3710 332 AQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKG 397 (424)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~ 397 (424)
......... .. ...+...+..++|+|++++|++++.||.|++|+....+
T Consensus 239 ~~~~~~~~~------~~-----------~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 239 EQGPWKKTL------LK-----------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp TTSCCEEEE------SS-----------SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred CCCccceee------ee-----------cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence 431100000 00 01234678899999999999999999999999987554
No 92
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=274.40 Aligned_cols=278 Identities=10% Similarity=0.083 Sum_probs=207.2
Q ss_pred ccccCCceEEEEECCC------CCeeEeecCCe-EEEEeCCcCccc-----------ccccccCCCeeeEEEeccCceEE
Q psy3710 6 SSTYKNGLLYAGFNQD------QGCFACGMEDG-FRIYNCDPLKEK-----------ERQDFTDGGLGHVEMLFRCNYLA 67 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~------g~~la~g~~~~-i~iw~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~~l~ 67 (424)
+.+|.+.|.+++|+|+ +.+||+++.|+ |+|||+..+... .....|.+.+.+++|+++ +.|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEE
Confidence 4577899999999997 57999999998 999999766421 123457889999999976 4676
Q ss_pred EEeCCcCCCcCCCeEEEEECCCCc-EEEEEe-ecCCeEEE--EecCCc-eEEEe---eccEEEEeecCCCceeEEEeeCC
Q psy3710 68 LVGGGTHPKYPNNRVMIWDDLKKQ-VVICLE-FNAPVKGV--RLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFETNP 139 (424)
Q Consensus 68 ~~~~~~~~~~~d~~i~iwd~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~~~~ 139 (424)
+++ .|++|++||+++++ ....+. |...|.++ .|+|++ .++++ |++|++||++ +.+....+..+.
T Consensus 282 sgs-------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~-~~~~~~~~~~~~ 353 (524)
T 2j04_B 282 CGF-------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK-DIATTKTTVSRF 353 (524)
T ss_dssp EEE-------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG-GHHHHCEEEEEC
T ss_pred EEe-------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC-CCCccccccccc
Confidence 666 58999999998764 344455 88999999 578887 66665 9999999997 666666666655
Q ss_pred CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcc
Q psy3710 140 NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 219 (424)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 219 (424)
....+.+++|+|+++.+++ ++.|++|++||++++ .....+.+|.+.|.+++|+|+|+.|++|+.|++ |++||+...
T Consensus 354 ~~~~v~~v~fsp~~~~l~s-~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~- 429 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIY-SDGASSLRAVPSRAA-FAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARR- 429 (524)
T ss_dssp SCCSCCCEEEETTTTEEEE-ECSSSEEEEEETTCT-TCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSS-
T ss_pred ccCcccceEeCCCcCeEEE-eCCCCcEEEEECccc-ccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHh-
Confidence 3333667899999999887 899999999999986 666778899999999999999999999999999 999998654
Q ss_pred eeeEEec--------ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC---EEEEEe
Q psy3710 220 KLNELRR--------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT---RLATAS 288 (424)
Q Consensus 220 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~ 288 (424)
.+...+. .+..++++|+++.+.+ .. ...+|+..........+.+|...|.+++|+|++. .+|+|+
T Consensus 430 ~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~ 505 (524)
T 2j04_B 430 LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN 505 (524)
T ss_dssp TTTCC------CCCCEEEECBCCSSSCEEEE--CC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEEC
T ss_pred hccccccCccceeeeEEEEeccCCCCCeEEc--cC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhc
Confidence 2222111 1346788888874422 22 2233333211224556779999999999999954 999999
Q ss_pred CCCcEEEEEECCC
Q psy3710 289 YKGTLIRVFDTGS 301 (424)
Q Consensus 289 ~d~~~i~iwd~~~ 301 (424)
.+|. |+||+++-
T Consensus 506 ~~g~-vrlw~l~~ 517 (524)
T 2j04_B 506 SAGL-LTLEYLSL 517 (524)
T ss_dssp TTSE-EEEEECSC
T ss_pred cCce-EEEEEccc
Confidence 9999 99999864
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-34 Score=262.99 Aligned_cols=274 Identities=15% Similarity=0.228 Sum_probs=221.1
Q ss_pred cccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw 85 (424)
.+|...|.|++| ++++|++|+.++ |++||+.+++.......|.+.|.++++ +++.+++++ .|++|++|
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~-------~dg~i~vw 198 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGS-------SDSTVRVW 198 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEE-------TTSCEEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEc-------CCCeEEEE
Confidence 467788999887 788999999998 999999999887777788999988877 788888887 68999999
Q ss_pred ECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCcee---EEEeeCCCCCeeEEEeecCCCCeEEEee
Q psy3710 86 DDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQL---HVFETNPNPKGLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 86 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (424)
|+.+++.+..+. |...|.+++|+++..+.++ |+.|++||+. ..... ..+..|. ..+.++.+ +++++++ |
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~-~~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~s-~ 272 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA-SPTDITLRRVLVGHR--AAVNVVDF--DDKYIVS-A 272 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECS-SSSCCEEEEEECCCS--SCEEEEEE--ETTEEEE-E
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCC-CCCCceeeeEecCCC--CcEEEEEe--CCCEEEE-E
Confidence 999999999888 8899999999876544444 8999999997 44433 4455555 44777777 6788888 9
Q ss_pred ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCC
Q psy3710 161 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNN 237 (424)
Q Consensus 161 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~ 237 (424)
+.||.|++||++++ +.+..+.+|...|.+++|+ ++++++++.|+. |++||+++++++..+..+ +..+++ ++
T Consensus 273 ~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 273 SGDRTIKVWNTSTC-EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp ETTSEEEEEETTTC-CEEEEEECCSSCEEEEEEE--TTEEEEEETTSC-EEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred eCCCeEEEEECCcC-cEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCe-EEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence 99999999999986 7778889999999999994 689999999999 999999999999888865 444455 44
Q ss_pred CeEEEEeecCCeEEEEeCCCCCC--------CCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee
Q psy3710 238 SLLAFPGRKSGHVHLVDLADPER--------PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE 307 (424)
Q Consensus 238 ~~~~~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~ 307 (424)
..+++|+.||.|++||+.++.. ....+.+|...|.+++| ++++|++++.||. |++||+.+......
T Consensus 347 -~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~-i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 347 -KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT-ILIWDFLNDPAAQA 420 (435)
T ss_dssp -SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSE-EEEEC---------
T ss_pred -CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCE-EEEEECCCCCCccc
Confidence 4566699999999999976542 34566789999999999 6788999999999 99999987665443
No 94
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=272.73 Aligned_cols=297 Identities=11% Similarity=0.068 Sum_probs=233.1
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEeeccEEEEeecCCCc
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQ 130 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~ 130 (424)
...+.+++|+|||..+|+++ .|++|+ |.+.++.+. .|+..|.+++|+|++ .++.+.+|+.+ +.
T Consensus 15 ~~~v~sv~~SpDG~~iASas-------~D~TV~--d~~~~~~l~--gh~~~v~~V~FsPdg----~~~~~~~~~~~--~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTF-------PDISIG--QPKYAKDIN--CNSKNLFHVKEFPLE----FENKLDFELAQ--QN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECS-------SSEEEE--EECCCSCCS--SBGGGTEEEEEECCC----CCCTTTTSCCC--SS
T ss_pred hccEEEEEECCCCCEEEEEc-------CCceee--cccccceec--CCCccEEEEEECCCC----CcceEEEEeCC--Cc
Confidence 57789999999999999998 689999 766665541 389999999999999 45555555542 22
Q ss_pred eeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccC-----CeEEEEEccCCCEEEEEec
Q psy3710 131 QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEA-----PLSCIALNQTGTRLATASY 205 (424)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~ 205 (424)
....+ .+ ...+.+++|+|+|+.||+ ++.||.|++||.+. ....+. |.. .|.+++|+|+|++|++|+.
T Consensus 78 ~~~~~-~~--~~~V~~vawSPdG~~LAs-~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 78 GLLNS-QP--VCYPRVCKPSPIDDWMAV-LSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp CSSTT-SC--SCCEEEEEECSSSSCEEE-EETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred eEeec-CC--CCcEEEEEECCCCCEEEE-EeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC
Confidence 22222 22 345899999999999998 99999999999543 444455 655 4999999999999999999
Q ss_pred CCcEEEEEECCCcce-------eeEEe-------cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC--Ceee-ccC
Q psy3710 206 KGTLIRVFDTGSGQK-------LNELR-------RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP--PLDI-AAH 268 (424)
Q Consensus 206 d~~~i~iwd~~~~~~-------~~~~~-------~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~--~~~~-~~~ 268 (424)
||+ |++||+.+++. +.+++ ..+..++|+|++ +++++.|+.|++||+...... ...+ .+|
T Consensus 150 DGt-VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 150 DGE-LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp TSE-EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred CCE-EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccc
Confidence 999 99999998753 45553 137889999998 455888999999999887632 2345 478
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceee------------ee--ccCCcEEEEEeCCCcEEEEEcccccc
Q psy3710 269 EAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN------------EL--RRDSSYLCVSSDHGTVHVFSVDEAQK 334 (424)
Q Consensus 269 ~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~------------~~--~~~~~~l~~~~~d~~i~iw~~~~~~~ 334 (424)
...|.+++|+ |+.||+++ +++ |++||+.+++... .| +|++..+++++.||+ ++|..+.
T Consensus 226 ~~~V~svaFs--g~~LASa~-~~t-IkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~--- 297 (588)
T 2j04_A 226 RRKITDLKIV--DYKVVLTC-PGY-VHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE--- 297 (588)
T ss_dssp SSCCCCEEEE--TTEEEEEC-SSE-EEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS---
T ss_pred cCcEEEEEEE--CCEEEEEe-CCe-EEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc---
Confidence 8999999999 68999998 588 9999999877622 36 889999999999999 9999872
Q ss_pred ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCccee---eeeehhhheec
Q psy3710 335 INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECW---RDVYIQFLEMT 411 (424)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~---~~~~~~~~~~~ 411 (424)
++++||+..+++. |+++++|+.. +++.. ....+..+.++
T Consensus 298 -----------------------------------~~~spd~~l~a~~--d~~v~lW~~~-g~~l~~~~~~~~I~~va~S 339 (588)
T 2j04_A 298 -----------------------------------LHVTADNIIAPYL--EKKFKKWSTI-WNEFNNYETTLVIHGISLS 339 (588)
T ss_dssp -----------------------------------EEEECCCSSHHHH--HHHHHHTTTT-TTSSSSSCCEEEEEEEEEC
T ss_pred -----------------------------------EEECCCceEEEEc--CCEEEEEECC-CCceeeeccceEEEEEEEC
Confidence 2589999887774 9999999874 22221 23445668899
Q ss_pred CCCceeeEEEe
Q psy3710 412 NDSNLLSCIEI 422 (424)
Q Consensus 412 ~d~~~l~~~~~ 422 (424)
|||+.+|.+--
T Consensus 340 PdG~~lA~~~~ 350 (588)
T 2j04_A 340 PDGYSIAIVYD 350 (588)
T ss_dssp TTSSEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999998753
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=264.08 Aligned_cols=240 Identities=16% Similarity=0.190 Sum_probs=192.0
Q ss_pred cCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc-----------EEEEEe-ec------------CCeEEE
Q psy3710 50 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-----------VVICLE-FN------------APVKGV 105 (424)
Q Consensus 50 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~-----------~~~~~~-~~------------~~v~~~ 105 (424)
+.+.|.+++|+|+++++++++ .|+.|++||+.+++ ....+. |. ..|.++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~-------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGD-------KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEE-------TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred ccCcEEEEEECCCCCEEEEEc-------CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEE
Confidence 468999999999999999988 68999999998877 466666 66 889999
Q ss_pred EecCCc--eEEEe---eccEEEEeecCCCcee---------------------------------------EE-EeeCCC
Q psy3710 106 RLRRDK--IVVVL---EGLIKVYTFIQCPQQL---------------------------------------HV-FETNPN 140 (424)
Q Consensus 106 ~~~~~~--~~~~~---~~~i~v~~~~~~~~~~---------------------------------------~~-~~~~~~ 140 (424)
+|+|++ ..+++ |+.|++|++. ..... .. ...|.
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~- 177 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKIS-ERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT- 177 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEE-EEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS-
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecc-cccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC-
Confidence 999996 34433 9999999986 32211 11 12343
Q ss_pred CCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc-------ccccccCCeEEEEEccCC-CEEEEEecCCcEEEE
Q psy3710 141 PKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL-------DIAAHEAPLSCIALNQTG-TRLATASYKGTLIRV 212 (424)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~~i~i 212 (424)
..+.+++|+|++++|++ | .|+.|++||++....... .+.+|...|.+++|+|++ ++|++++.|+. |++
T Consensus 178 -~~v~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~i 253 (447)
T 3dw8_B 178 -YHINSISINSDYETYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRL 253 (447)
T ss_dssp -SCCCEEEECTTSSEEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEE
T ss_pred -cceEEEEEcCCCCEEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEE
Confidence 45888999999999998 7 799999999984323332 467899999999999998 99999999999 999
Q ss_pred EECCCcce----eeEEec---------------ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCC--
Q psy3710 213 FDTGSGQK----LNELRR---------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAP-- 271 (424)
Q Consensus 213 wd~~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-- 271 (424)
||+++++. +..+.. .+..++++|++..++. ++. +.|++||+++...+...+..|...
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT-RDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE-EES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE-eeC-CeEEEEeCCCCccccceeeccccccc
Confidence 99998876 566654 5678899998887775 666 999999999855566777777532
Q ss_pred -------------eEEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee
Q psy3710 272 -------------LSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 272 -------------v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 305 (424)
+..++|+|++++|++++.|+. |++||+.+++.+
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-v~iwd~~~~~~~ 377 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-FRMFDRNTKRDI 377 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-EEEEETTTCCEE
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCE-EEEEEcCCCcce
Confidence 334999999999999999999 999999988765
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=258.05 Aligned_cols=256 Identities=14% Similarity=0.141 Sum_probs=205.7
Q ss_pred cccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCC--cCcccccccccCCCeeeEEEecc--CceEEEEeCCcCCCc
Q psy3710 3 LGTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCD--PLKEKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKY 77 (424)
Q Consensus 3 ~~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~~~ 77 (424)
+..+.+|.+.|++++|+|++++||+|+.++ |+||++. +.+.......|.+.|.+++|+++ ++++++++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~------- 76 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------- 76 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-------
Confidence 346889999999999999999999999888 9999997 44445556678999999999987 88888888
Q ss_pred CCCeEEEEECCCCc--EEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCC-ceeEEEeeCCCCCeeEEEe
Q psy3710 78 PNNRVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCP-QQLHVFETNPNPKGLCVLC 148 (424)
Q Consensus 78 ~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~ 148 (424)
.|+.|++||+.+++ .+..+. |...|.+++|+|+ +.++++ |+.|++||+.... .....+..+. ..+.+++
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--~~v~~~~ 154 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA--IGVNSAS 154 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT--TCEEEEE
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC--CceEEEE
Confidence 68999999999887 555555 7899999999998 655554 8999999997332 2333444444 5588999
Q ss_pred ecC-------------CCCeEEEeeccCCeEEEEeCCCCCC---CCcccccccCCeEEEEEccC---CCEEEEEecCCcE
Q psy3710 149 PNS-------------NNSLLAFPGRKSGHVHLVDLADPER---PPLDIAAHEAPLSCIALNQT---GTRLATASYKGTL 209 (424)
Q Consensus 149 ~~~-------------~~~~l~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~~ 209 (424)
|+| ++.++++ |+.||.|++||++.+.. ....+.+|...|.+++|+|+ +++|++++.|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~- 232 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT- 232 (379)
T ss_dssp ECCCC----------CTTCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-
T ss_pred EcCccccccccccCCCCCCEEEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-
Confidence 999 6888888 99999999999987532 23466789999999999999 899999999999
Q ss_pred EEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeC
Q psy3710 210 IRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 210 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
|++||++++....... ......|...|.+++|+|++++|++++.
T Consensus 233 i~iwd~~~~~~~~~~~------------------------------------~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 233 CIIWTQDNEQGPWKKT------------------------------------LLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEEEEESSTTSCCEEE------------------------------------ESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred EEEEeCCCCCccceee------------------------------------eeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 9999998764221110 0111258889999999999999999999
Q ss_pred CCcEEEEEECCCCceee
Q psy3710 290 KGTLIRVFDTGSGQKLN 306 (424)
Q Consensus 290 d~~~i~iwd~~~~~~~~ 306 (424)
||. |++|++..+....
T Consensus 277 dg~-i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 277 DNK-VTLWKENLEGKWE 292 (379)
T ss_dssp SSS-EEEEEEEETTEEE
T ss_pred CCc-EEEEeCCCCCccc
Confidence 999 9999998654433
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8e-35 Score=253.83 Aligned_cols=261 Identities=16% Similarity=0.193 Sum_probs=190.6
Q ss_pred EeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCC-CCCcccccccCCeEEEEEcc--CCCEEEEEecCCcEEE
Q psy3710 135 FETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE-RPPLDIAAHEAPLSCIALNQ--TGTRLATASYKGTLIR 211 (424)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~~i~ 211 (424)
+.+|.. .+.+++|+|++++|++ |+.|+.|++||+.++. .....+.+|.++|.+++|+| ++++|++++.|++ |+
T Consensus 9 ~~~H~~--~V~~v~~s~~g~~las-gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~-v~ 84 (316)
T 3bg1_A 9 DTSHED--MIHDAQMDYYGTRLAT-CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK-VI 84 (316)
T ss_dssp -----C--CEEEEEECGGGCEEEE-EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC-EE
T ss_pred cccccC--eEEEeeEcCCCCEEEE-EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE-EE
Confidence 345554 4889999999999998 9999999999998752 23567889999999999986 4899999999999 99
Q ss_pred EEECCCcc--eeeEEecc---eeeeeecCCC-CeEEEEeecCCeEEEEeCCCCCCC--CeeeccCCCCeEEEEEcCC---
Q psy3710 212 VFDTGSGQ--KLNELRRG---LCVLCPNSNN-SLLAFPGRKSGHVHLVDLADPERP--PLDIAAHEAPLSCIALNQT--- 280 (424)
Q Consensus 212 iwd~~~~~--~~~~~~~~---~~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~--- 280 (424)
+||+++++ ....+..+ +..++++|++ ..++++|+.|+.|++||++..... ...+.+|...|.+++|+|+
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998874 45555443 7788999984 456677999999999999875421 3455689999999999997
Q ss_pred --------------CCEEEEEeCCCcEEEEEECCCC---ceee------------eeccCC----cEEEEEeCCCcEEEE
Q psy3710 281 --------------GTRLATASYKGTLIRVFDTGSG---QKLN------------ELRRDS----SYLCVSSDHGTVHVF 327 (424)
Q Consensus 281 --------------~~~l~~~~~d~~~i~iwd~~~~---~~~~------------~~~~~~----~~l~~~~~d~~i~iw 327 (424)
+++|++++.|+. |++||++.+ +++. .|+|++ .+|++++.|++|+||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred ccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 478999999999 999999754 2332 245665 789999999999999
Q ss_pred EccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeeeeehhh
Q psy3710 328 SVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDVYIQF 407 (424)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~ 407 (424)
++.+..... +....+..+.+.+..++|+|++++|++++.||.|++|+....++.. .
T Consensus 244 ~~~~~~~~~------------------~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~------~ 299 (316)
T 3bg1_A 244 TCDDASSNT------------------WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWV------C 299 (316)
T ss_dssp ECSSTTCCC------------------CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEE------E
T ss_pred EccCccccc------------------hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEE------E
Confidence 997632100 0001123456788999999999999999999999999987554322 1
Q ss_pred heecCCCceeeEEEeeC
Q psy3710 408 LEMTNDSNLLSCIEILE 424 (424)
Q Consensus 408 ~~~~~d~~~l~~~~~~~ 424 (424)
+..-++++.++.+.|.|
T Consensus 300 ~~~~~~~~~~~~~~~~~ 316 (316)
T 3bg1_A 300 ISDVNKGQGSVSASVTE 316 (316)
T ss_dssp EEECC------------
T ss_pred eeeccCCCCceeeeecC
Confidence 22334555555555544
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.8e-34 Score=253.78 Aligned_cols=272 Identities=14% Similarity=0.070 Sum_probs=221.4
Q ss_pred Ccccc-ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcc---cccccccCCCeeeEEEeccCc-eEEEEeCCcC
Q psy3710 1 MNLGT-SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKE---KERQDFTDGGLGHVEMLFRCN-YLALVGGGTH 74 (424)
Q Consensus 1 m~~~~-l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~---~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~ 74 (424)
|+... ..+|.+.|++++|+|++++|++|+.++ |++|++.+.+. ......|...+.+++|+|+++ .+++++
T Consensus 1 m~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---- 76 (342)
T 1yfq_A 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT---- 76 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE----
T ss_pred CcceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc----
Confidence 33333 468999999999999999999998888 99999987761 223346789999999999999 888888
Q ss_pred CCcCCCeEEEEEC-CCCcEEEEEe--ecCCeEEEEecCCceEEEe---eccEEEEeecCC---------CceeEEEeeCC
Q psy3710 75 PKYPNNRVMIWDD-LKKQVVICLE--FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQC---------PQQLHVFETNP 139 (424)
Q Consensus 75 ~~~~d~~i~iwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~---------~~~~~~~~~~~ 139 (424)
.|+.|++||+ .+++...... |...|.+++|+| +..+++ |+.|++||++ . .+.+..+. +
T Consensus 77 ---~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~-~- 149 (342)
T 1yfq_A 77 ---VQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR-NYGDGVIAVKNLNSNNTK-V- 149 (342)
T ss_dssp ---TTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH-HHTTBCEEEEESCSSSSS-S-
T ss_pred ---CCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc-ccccccccccCCeeeEEe-e-
Confidence 5899999999 8888755555 889999999999 655544 8999999986 4 44444444 3
Q ss_pred CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCC-CCCC-CcccccccCCeEEEEEcc-CCCEEEEEecCCcEEEEEECC
Q psy3710 140 NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD-PERP-PLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTG 216 (424)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~ 216 (424)
...+.+++++|++ +++ ++.++.|++||+++ .... ......|...|.+++|+| +++++++++.|+. |++|+++
T Consensus 150 -~~~v~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~ 224 (342)
T 1yfq_A 150 -KNKIFTMDTNSSR--LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFD 224 (342)
T ss_dssp -CCCEEEEEECSSE--EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECC
T ss_pred -CCceEEEEecCCc--EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEc
Confidence 3458889999887 666 99999999999997 5332 224456888999999999 9999999999999 9999998
Q ss_pred Cc------ceeeEEec------------ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccC-CCCeEEEEE
Q psy3710 217 SG------QKLNELRR------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH-EAPLSCIAL 277 (424)
Q Consensus 217 ~~------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~ 277 (424)
.. +....+.. .+..++++|++..++ +++.||.|++||+.+++. ...+..| ..+|.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~- 301 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGSDGIISCWNLQTRKK-IKNFAKFNEDSVVKIA- 301 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEETTSCEEEEETTTTEE-EEECCCCSSSEEEEEE-
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE-EecCCceEEEEcCccHhH-hhhhhcccCCCceEec-
Confidence 76 66666654 466789999888765 489999999999998763 5566777 99999999
Q ss_pred cCCCCEEEEEeCCCc
Q psy3710 278 NQTGTRLATASYKGT 292 (424)
Q Consensus 278 ~~~~~~l~~~~~d~~ 292 (424)
|++++|++++.|+.
T Consensus 302 -~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 302 -CSDNILCLATSDDT 315 (342)
T ss_dssp -ECSSEEEEEEECTH
T ss_pred -CCCCeEEEEecCCc
Confidence 99999999999986
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.2e-32 Score=245.20 Aligned_cols=325 Identities=14% Similarity=0.118 Sum_probs=241.4
Q ss_pred CCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEE-Ee---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCC
Q psy3710 78 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVV-VL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (424)
.|+.|++||+.+++.+..+.+...+.+++|+|++..+ ++ ++.|++||+. +++.+..+..+. .+.+++++|++
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~~~~~---~v~~~~~spdg 85 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIATVPAGS---SPQGVAVSPDG 85 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT-TTEEEEEEECSS---SEEEEEECTTS
T ss_pred CCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECC-CCeEEEEEECCC---CccceEECCCC
Confidence 4899999999999999999877789999999999654 33 7899999996 777777776554 57889999999
Q ss_pred CeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEE-EEEecCCcEEEEEECCCcceeeEEecc--eee
Q psy3710 154 SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL-ATASYKGTLIRVFDTGSGQKLNELRRG--LCV 230 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~~i~iwd~~~~~~~~~~~~~--~~~ 230 (424)
++|+++++.++.|++||+.++ +....+. +...+.+++|+|+++.+ ++++.++. |++||+.+++.+..+..+ ...
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~-~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~ 162 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSN-TVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKT-VSVINTVTKAVINTVSVGRSPKG 162 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEECCSSEEE
T ss_pred CEEEEEECCCCEEEEEECCCC-eEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCcEEEEEecCCCcce
Confidence 998775778899999999986 4444444 44578999999999977 67778998 999999999888877644 677
Q ss_pred eeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEEECCCCceeee
Q psy3710 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS---YKGTLIRVFDTGSGQKLNE 307 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~~i~iwd~~~~~~~~~ 307 (424)
++++|++..+++++..++.|++||+++++. ...+ .+...+.+++|+|++++|++++ .++. |++||+.+++.+..
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~ 239 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVTNSV-IDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITAR 239 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCeE-EEEE-ecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEE
Confidence 899999999988899999999999988653 2233 4567899999999999999988 6888 99999998876654
Q ss_pred -----------eccCCcEE-EEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecC
Q psy3710 308 -----------LRRDSSYL-CVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGAD 375 (424)
Q Consensus 308 -----------~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 375 (424)
++|+++++ ++++.|+.|++||+.+++.+.............. +..............|+.+
T Consensus 240 ~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~fs~~ 312 (391)
T 1l0q_A 240 IPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQ-------FIGSIPVQPVYPSADFKSN 312 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSS-------CEEECSSCCCCCBCCEEES
T ss_pred EecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccce-------eeecccccccccccccccc
Confidence 56889877 6778899999999999877655433211100000 0000000011112233332
Q ss_pred C----------CeEEEEeccCcEEEEEecCCcceeeeeehhhheecCCCceeeEEE
Q psy3710 376 S----------NSIIVICADGSYYKFMFNSKGECWRDVYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 376 ~----------~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 421 (424)
. ..+...+.|...++|++.. +.. .........++++|.+.+...
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-g~~-~~~~~~~~~~~~~g~y~~~~~ 366 (391)
T 1l0q_A 313 ITSGYIFLSEPVQFTDLSKDATEWKWDFGD-GSS-SKKQNPTHTYSETGIYTVRLT 366 (391)
T ss_dssp CCSSEEETTCCEEEEECCBSCSEEEEECSS-SCE-ECSSSCEECCSSCEEEEEEEE
T ss_pred cccccccccceEEEEeCCCCceEEEEECCC-Ccc-cCcCCCeEEeCCCceEEEEEE
Confidence 2 3455566788999999974 332 223334456788888877654
No 100
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-34 Score=252.87 Aligned_cols=277 Identities=13% Similarity=0.128 Sum_probs=222.1
Q ss_pred ccccccCCceEEEEECCC---CCeeEeecCCe-EEEEeCCc-Cccc-ccccccCCCeeeEEEeccCceEEEEeCCcCCCc
Q psy3710 4 GTSSTYKNGLLYAGFNQD---QGCFACGMEDG-FRIYNCDP-LKEK-ERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~---g~~la~g~~~~-i~iw~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~ 77 (424)
..+.+|.+.|++++|+|+ |++|++|+.++ |++||+++ +... .....|.+.|.+++|+|+++++++++
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------- 105 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS------- 105 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-------
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-------
Confidence 347899999999999999 69999999888 99999987 4443 45666899999999999999999888
Q ss_pred CCCeEEEEECCCCcEEEEEeecCCeEEEEe--cCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC
Q psy3710 78 PNNRVMIWDDLKKQVVICLEFNAPVKGVRL--RRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
.|+.|++||+.+++.+....|...|.+++| ++++.++++ |+.|++||++ ..+.+..+..+. .+.++.+.
T Consensus 106 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~---~~~~~~~~-- 179 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR-SSNPMMVLQLPE---RCYCADVI-- 179 (368)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS-CSSCSEEEECSS---CEEEEEEE--
T ss_pred CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC-CCcEEEEEecCC---CceEEEec--
Confidence 689999999999998887779999999999 899876665 8999999997 677777777654 34555554
Q ss_pred CCeEEEeeccCCeEEEEeCCCCCCCCccc-ccccCCeEEEEEccCCCE----EEEEecCCcEEEEEECCCc---ceeeEE
Q psy3710 153 NSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAPLSCIALNQTGTR----LATASYKGTLIRVFDTGSG---QKLNEL 224 (424)
Q Consensus 153 ~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~~~~~d~~~i~iwd~~~~---~~~~~~ 224 (424)
...+++ ++.++.+.+|+++......... ..+...+..+++.++... +++++.|+. |++||++.. +....+
T Consensus 180 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 180 YPMAVV-ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp TTEEEE-EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEEE
T ss_pred CCeeEE-EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccceee
Confidence 446666 8899999999998753222222 234456677777665554 999999999 999999887 445555
Q ss_pred ec---------------ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeC
Q psy3710 225 RR---------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 225 ~~---------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
.. .+..++++|++..++ +++.||.|++||+.+++ ....+..|..+|.+++|+|++++|++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA-TVGSDGRFSFWDKDART-KLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEE-EEETTSCEEEEETTTTE-EEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred eeeecccccccccccccceEEEEEecCCCEEE-EEccCCeEEEEECCCCc-EEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 43 366789999887665 59999999999999865 35667789999999999999999999999
Q ss_pred CCcEEEEEE
Q psy3710 290 KGTLIRVFD 298 (424)
Q Consensus 290 d~~~i~iwd 298 (424)
|+. .+.|+
T Consensus 336 d~~-~~~~~ 343 (368)
T 3mmy_A 336 YDW-SKGHE 343 (368)
T ss_dssp CCS-TTCGG
T ss_pred ccc-ccccc
Confidence 876 44443
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.9e-32 Score=245.41 Aligned_cols=269 Identities=13% Similarity=0.122 Sum_probs=217.6
Q ss_pred CeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCC
Q psy3710 23 GCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP 101 (424)
Q Consensus 23 ~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 101 (424)
.++++++.++ |++||+++++.......+ ..+.+++|+|+++.+++++. .|++|++||+.+++.+..+.+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~------~d~~i~v~d~~~~~~~~~~~~~~~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANA------HSNDVSIIDTATNNVIATVPAGSS 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEG------GGTEEEEEETTTTEEEEEEECSSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECC------CCCeEEEEECCCCeEEEEEECCCC
Confidence 3566777777 999999988876655554 45889999999998866654 379999999999999999987779
Q ss_pred eEEEEecCCceEEE-e---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCC
Q psy3710 102 VKGVRLRRDKIVVV-L---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP 177 (424)
Q Consensus 102 v~~~~~~~~~~~~~-~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~ 177 (424)
+.+++|+|++..++ + ++.|++||+. +++.+..+..+. .+..++++|+++.++++++.++.|++||+.++ +.
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~-~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-~~ 150 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTT-SNTVAGTVKTGK---SPLGLALSPDGKKLYVTNNGDKTVSVINTVTK-AV 150 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEECSS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTT-EE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECC-CCeEEEEEeCCC---CcceEEECCCCCEEEEEeCCCCEEEEEECCCC-cE
Confidence 99999999997654 3 5899999996 677776666543 46789999999988655889999999999876 45
Q ss_pred CcccccccCCeEEEEEccCCCEE-EEEecCCcEEEEEECCCcceeeEEecc--eeeeeecCCCCeEEEEee--cCCeEEE
Q psy3710 178 PLDIAAHEAPLSCIALNQTGTRL-ATASYKGTLIRVFDTGSGQKLNELRRG--LCVLCPNSNNSLLAFPGR--KSGHVHL 252 (424)
Q Consensus 178 ~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~dg~i~i 252 (424)
...+..+ ..+.+++|+|+++.+ ++++.++. |++||+++++.+..+..+ ...++++|++..+++++. .++.|++
T Consensus 151 ~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 151 INTVSVG-RSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp EEEEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEE
T ss_pred EEEEecC-CCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEE
Confidence 5555544 557999999999887 56778888 999999999888777644 667889999999888665 7999999
Q ss_pred EeCCCCCCCCeeeccCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEECCCCceeeee
Q psy3710 253 VDLADPERPPLDIAAHEAPLSCIALNQTGTRL-ATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
||+.+++. ...+..| ..+.+++|+|++++| ++++.|+. |++||+.+++.+..+
T Consensus 229 ~d~~~~~~-~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~-v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 229 IDTGTNKI-TARIPVG-PDPAGIAVTPDGKKVYVALSFXNT-VSVIDTATNTITATM 282 (391)
T ss_dssp EETTTTEE-EEEEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEE
T ss_pred EECCCCeE-EEEEecC-CCccEEEEccCCCEEEEEcCCCCE-EEEEECCCCcEEEEE
Confidence 99988653 3444444 457899999999987 56678999 999999999887664
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=260.03 Aligned_cols=266 Identities=13% Similarity=0.146 Sum_probs=205.3
Q ss_pred EECCCCCeeEeecCCeEEEEeCCcCcccccc-cccCCCeeeEEEec-cCceEEEEeCCcCCCcCCCeEEEEECCC---Cc
Q psy3710 17 GFNQDQGCFACGMEDGFRIYNCDPLKEKERQ-DFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLK---KQ 91 (424)
Q Consensus 17 ~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~~~~~~~~d~~i~iwd~~~---~~ 91 (424)
.|+|+++.++++. .|+.. ++.+... ..|.+.|.+++|+| +++++++++ .|++|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~-----~w~~~-g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s-------~dg~v~vwd~~~~~~~~ 100 (437)
T 3gre_A 34 EFGPIQEIVRSPN-----MGNLR-GKLIATLMENEPNSITSSAVSPGETPYLITGS-------DQGVIKIWNLKEIIVGE 100 (437)
T ss_dssp GGCCCCCCCCCCC-----GGGCC-CCEEEEECTTTTSCEEEEEEECSSSCEEEEEE-------TTSEEEEEEHHHHHTTC
T ss_pred hcCCccccccccc-----ccccc-ceEEeeeccCCCCceEEEEECCCCCCEEEEec-------CCceEEEeECcccccCc
Confidence 4677777777665 48743 4444444 67889999999999 999999998 689999999876 33
Q ss_pred ---EEEEEeecCCeEEEEecCCceEEEe---eccEEEEeec--CCCceeEEEeeC--------C--CCCeeEEEe--ecC
Q psy3710 92 ---VVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFI--QCPQQLHVFETN--------P--NPKGLCVLC--PNS 151 (424)
Q Consensus 92 ---~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~--~~~~~~~~~~~~--------~--~~~~~~~~~--~~~ 151 (424)
....+.|...|.+++|+|++..+++ |+.|++||+. ..++....+..+ . ....+.++. +++
T Consensus 101 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 101 VYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred ccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 3445568999999999999876665 8999999994 133333332221 1 223344444 678
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCccccc--ccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEeccee
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLC 229 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~ 229 (424)
++.++++ |+.||.|++||++++ +.+..+.. |...|.+++|+|++++|++++.|+. |++||+++++++..+..
T Consensus 181 ~~~~l~~-~~~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~--- 254 (437)
T 3gre_A 181 EKSLLVA-LTNLSRVIIFDIRTL-ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGI-IDIWDIRFNVLIRSWSF--- 254 (437)
T ss_dssp SCEEEEE-EETTSEEEEEETTTC-CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSC-EEEEETTTTEEEEEEBC---
T ss_pred CCCEEEE-EeCCCeEEEEeCCCC-eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCe-EEEEEcCCccEEEEEec---
Confidence 8999998 999999999999986 66777777 8999999999999999999999999 99999998877665531
Q ss_pred eeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEc----CCCCEEEEEeCCCcEEEEEECCCCcee
Q psy3710 230 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALN----QTGTRLATASYKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~d~~~i~iwd~~~~~~~ 305 (424)
.|..+|.+++|+ |++.+|++++.|+. |++||+++++++
T Consensus 255 -------------------------------------~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iwd~~~~~~~ 296 (437)
T 3gre_A 255 -------------------------------------GDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIWNFVKGHCQ 296 (437)
T ss_dssp -------------------------------------TTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEEETTTTEEE
T ss_pred -------------------------------------CCCCceEEEEeccccCCCccEEEEEcCCCc-EEEEEcCCCcEE
Confidence 355678888555 46778999999998 999999888776
Q ss_pred eeec------------c-------------------------CCcEEEEEeCCCcEEEEEccccccccccc
Q psy3710 306 NELR------------R-------------------------DSSYLCVSSDHGTVHVFSVDEAQKINKQS 339 (424)
Q Consensus 306 ~~~~------------~-------------------------~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 339 (424)
..+. | ++++|++++.|+.|++||+.+++.+....
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 297 YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 6543 1 34789999999999999999988765433
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.1e-34 Score=258.40 Aligned_cols=277 Identities=11% Similarity=0.103 Sum_probs=223.5
Q ss_pred ceEEEEECCCCCeeE-eecCCe-EEEEeCCcCcc----cccccccCCCeeeEEEec-cCceEEEEeCCcCCCcCCCeEEE
Q psy3710 12 GLLYAGFNQDQGCFA-CGMEDG-FRIYNCDPLKE----KERQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 12 ~V~~~~~s~~g~~la-~g~~~~-i~iw~~~~~~~----~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
....++++|+...++ +++.++ |+||++..... ......|.+.|.+++|+| +++++++++ .|++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-------~dg~v~v 108 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS-------EDCTVMV 108 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE-------TTSEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe-------CCCeEEE
Confidence 445688999875554 567777 99999865432 333556899999999999 888898888 6899999
Q ss_pred EECCCC-------cEEEEEe-ecCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEE--eeCCCCCeeEEEeec
Q psy3710 85 WDDLKK-------QVVICLE-FNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVF--ETNPNPKGLCVLCPN 150 (424)
Q Consensus 85 wd~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 150 (424)
||+.++ +.+..+. |...|.+++|+|++ .++++ |+.|++||+. .++.+..+ ..|. ..+.+++|+
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~--~~v~~~~~~ 185 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-TGAAVLTLGPDVHP--DTIYSVDWS 185 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT-TTEEEEEECTTTCC--SCEEEEEEC
T ss_pred EEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-CCCccEEEecCCCC--CceEEEEEC
Confidence 999987 5566776 89999999999997 45554 8999999997 77777777 4454 558999999
Q ss_pred CCCCeEEEeeccCCeEEEEeCCCCCCCCccc-ccccCC-eEEEEEccCCCEEEEE---ecCCcEEEEEECCCcce-eeEE
Q psy3710 151 SNNSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAP-LSCIALNQTGTRLATA---SYKGTLIRVFDTGSGQK-LNEL 224 (424)
Q Consensus 151 ~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~~i~iwd~~~~~~-~~~~ 224 (424)
|++++|++ ++.||.|++||++++ ..+..+ ..|.+. +.+++|+|++++|+++ +.|+. |++||+++++. +...
T Consensus 186 ~~~~~l~~-~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 186 RDGALICT-SCRDKRVRVIEPRKG-TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQ 262 (402)
T ss_dssp TTSSCEEE-EETTSEEEEEETTTT-EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEE
T ss_pred CCCCEEEE-EecCCcEEEEeCCCC-ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEE
Confidence 99999998 999999999999986 556666 678776 8999999999999998 78999 99999998754 3222
Q ss_pred e----cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEE
Q psy3710 225 R----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLATASYKGTLIRVFD 298 (424)
Q Consensus 225 ~----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 298 (424)
. ..+..++++|++..++++|+.||.|++||+.+++.....+.. |..+|.+++|+|++.++++ .++. +++|+
T Consensus 263 ~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~-~~~~~ 339 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEI-ARFYK 339 (402)
T ss_dssp ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEE-EEEEE
T ss_pred eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--ccee-EEEEE
Confidence 2 337788999999999988889999999999987753444444 5589999999999988775 4557 99999
Q ss_pred CCCCce
Q psy3710 299 TGSGQK 304 (424)
Q Consensus 299 ~~~~~~ 304 (424)
+.+++.
T Consensus 340 l~~~~~ 345 (402)
T 2aq5_A 340 LHERKC 345 (402)
T ss_dssp EETTEE
T ss_pred cCCCcE
Confidence 987654
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=250.10 Aligned_cols=280 Identities=13% Similarity=0.185 Sum_probs=222.9
Q ss_pred EECCCCcEEEEEe-ecCCeEEEEecCC---ceEEEe---eccEEEEeecCCCcee-EEEeeCCCCCeeEEEeecCCCCeE
Q psy3710 85 WDDLKKQVVICLE-FNAPVKGVRLRRD---KIVVVL---EGLIKVYTFIQCPQQL-HVFETNPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 85 wd~~~~~~~~~~~-~~~~v~~~~~~~~---~~~~~~---~~~i~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l 156 (424)
|+....+.+..+. |.+.|.+++|+|+ +.++++ |+.|++||+...+..+ ..+..|..+ +.+++|+|++++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l 101 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGP--VLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSC--EEEEEECTTSSEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCC--EEEEEECcCCCEE
Confidence 3445555666665 8999999999999 466665 8999999997424444 667777644 8899999999999
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEE--ccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeec
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIAL--NQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPN 234 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~ 234 (424)
++ ++.||.|++||+.++ ....+..|...|.+++| +|++++|++++.|+. |++||+++++.+..+..+....++.
T Consensus 102 ~s-~~~dg~v~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~ 177 (368)
T 3mmy_A 102 FT-ASCDKTAKMWDLSSN--QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKT-LKFWDTRSSNPMMVLQLPERCYCAD 177 (368)
T ss_dssp EE-EETTSEEEEEETTTT--EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSE-EEEECSSCSSCSEEEECSSCEEEEE
T ss_pred EE-EcCCCcEEEEEcCCC--CceeeccccCceEEEEEEeCCCCCEEEEccCCCc-EEEEECCCCcEEEEEecCCCceEEE
Confidence 98 999999999999985 34456789999999999 899999999999999 9999999999998888776666665
Q ss_pred CCCCeEEEEeecCCeEEEEeCCCCCCCCeee-ccCCCCeEEEEEcCCCCE----EEEEeCCCcEEEEEECCCCce-----
Q psy3710 235 SNNSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAPLSCIALNQTGTR----LATASYKGTLIRVFDTGSGQK----- 304 (424)
Q Consensus 235 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~~~~~d~~~i~iwd~~~~~~----- 304 (424)
+....+++ ++.++.+++|+++......... ..+...+.++++.++... +++++.|+. |++||++....
T Consensus 178 ~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 178 VIYPMAVV-ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNF 255 (368)
T ss_dssp EETTEEEE-EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSE
T ss_pred ecCCeeEE-EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccce
Confidence 55555554 8899999999998765333222 234556677777665554 999999999 99999987621
Q ss_pred --------------------e--eeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEee
Q psy3710 305 --------------------L--NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQI 362 (424)
Q Consensus 305 --------------------~--~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (424)
+ ..|+|++++|++++.||.|++||+.+++++.. +..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~----------------------~~~ 313 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT----------------------SEQ 313 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE----------------------CCC
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE----------------------ecC
Confidence 2 24678999999999999999999998776433 334
Q ss_pred cCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 363 PSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 363 ~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
|.+++..++|+|++++|++++.|+..+.|++.
T Consensus 314 ~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 314 LDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 56789999999999999999999877666654
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.5e-32 Score=248.25 Aligned_cols=276 Identities=17% Similarity=0.223 Sum_probs=191.1
Q ss_pred cCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecC
Q psy3710 50 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQ 127 (424)
Q Consensus 50 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~ 127 (424)
|...|.++ .++++.+++++ .|+.|++||..+++.+..+. |...|.++++.++..+.++ ||.|++||+.
T Consensus 132 ~~~~v~~~--~~d~~~l~~g~-------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~- 201 (435)
T 1p22_A 132 TSKGVYCL--QYDDQKIVSGL-------RDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVN- 201 (435)
T ss_dssp SCCCEEEE--ECCSSEEEEEE-------SSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESS-
T ss_pred CCCcEEEE--EECCCEEEEEe-------CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECC-
Confidence 44556554 55889998888 58999999999999999988 8999999999443333333 8999999997
Q ss_pred CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCC---cccccccCCeEEEEEccCCCEEEEEe
Q psy3710 128 CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP---LDIAAHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
+++.+..+..|.. .+.++.++ +..+++ |+.||.|++||+.++ ... ..+.+|...|.+++| +++++++++
T Consensus 202 ~~~~~~~~~~h~~--~v~~l~~~--~~~l~s-~s~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 202 TGEMLNTLIHHCE--AVLHLRFN--NGMMVT-CSKDRSIAVWDMASP-TDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp SCCEEEEECCCCS--CEEEEECC--TTEEEE-EETTSCEEEEECSSS-SCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred CCcEEEEEcCCCC--cEEEEEEc--CCEEEE-eeCCCcEEEEeCCCC-CCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 7788888887764 47888886 457777 999999999999986 333 567789999999999 678999999
Q ss_pred cCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCC
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTG 281 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 281 (424)
.|+. |++||+++++.+..+..+ +..+.+ ++ .++++|+.||.|++||+++++ ....+.+|...|.+++|
T Consensus 274 ~dg~-i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~g~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~~~~---- 344 (435)
T 1p22_A 274 GDRT-IKVWNTSTCEFVRTLNGHKRGIACLQY--RD-RLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF---- 344 (435)
T ss_dssp TTSE-EEEEETTTCCEEEEEECCSSCEEEEEE--ET-TEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEC----
T ss_pred CCCe-EEEEECCcCcEEEEEcCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCCCC-EEEEEeCCcCcEEEEEe----
Confidence 9999 999999998887776633 222222 22 233335555555555555433 23344455555555544
Q ss_pred CEEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEe
Q psy3710 282 TRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQ 361 (424)
Q Consensus 282 ~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (424)
++.+|++|+.||.|++||+.+++..... ........+.
T Consensus 345 -----------------------------~~~~l~sg~~dg~i~vwd~~~~~~~~~~-------------~~~~~~~~~~ 382 (435)
T 1p22_A 345 -----------------------------DNKRIVSGAYDGKIKVWDLVAALDPRAP-------------AGTLCLRTLV 382 (435)
T ss_dssp -----------------------------CSSEEEEEETTSCEEEEEHHHHTSTTSC-------------TTTTEEEEEC
T ss_pred -----------------------------cCCEEEEEeCCCcEEEEECCCCCCcccc-------------ccchheeecc
Confidence 3345555555556666665554321110 0011123355
Q ss_pred ecCCCceEEEEecCCCeEEEEeccCcEEEEEecCC
Q psy3710 362 IPSDPPCICAFGADSNSIIVICADGSYYKFMFNSK 396 (424)
Q Consensus 362 ~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~ 396 (424)
.|.+.+..++| ++++|++++.||.|++|++...
T Consensus 383 ~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 383 EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp CCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 67778888888 7889999999999999999743
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.3e-32 Score=232.68 Aligned_cols=272 Identities=11% Similarity=0.107 Sum_probs=196.0
Q ss_pred ceEEEEECCCC---CeeEeecCCeEEEEeCCcC---cccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE
Q psy3710 12 GLLYAGFNQDQ---GCFACGMEDGFRIYNCDPL---KEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 12 ~V~~~~~s~~g---~~la~g~~~~i~iw~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw 85 (424)
.+.++-|-.-| ..++++++..|++|+.... +......+|..+|..+.+.|+...|+.+.-+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------ 108 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGN------------ 108 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECS------------
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecc------------
Confidence 35566665544 3677899999999999888 55667778888999999999887777666331
Q ss_pred ECCCCcEEEEEeecCCeEEEEecCC----ceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe-
Q psy3710 86 DDLKKQVVICLEFNAPVKGVRLRRD----KIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP- 159 (424)
Q Consensus 86 d~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 159 (424)
+ +...|++++++|+ +..+++ ...+.+|++ ++++++.++
T Consensus 109 -~----------~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l-------------------------~~g~lv~ss~ 152 (356)
T 2w18_A 109 -L----------EIREIRALFCSSDDESEKQVLLKSGNIKAVLGL-------------------------TKRRLVSSSG 152 (356)
T ss_dssp -S----------SEEEEEEECC------CCEEEEEEEEEEEEEEE-------------------------TTTEEEEEES
T ss_pred -c----------cccceEEEEECCCccccccEEEeCCCeEEEEec-------------------------CCCcEEEecc
Confidence 1 2346889999999 888877 335666643 234444431
Q ss_pred eccCCeEEEEeCCCCCCCCcccccccCCeEEEEEcc---CCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCC
Q psy3710 160 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ---TGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSN 236 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (424)
.+.|+.|++|++....+.+..+..|...+..++|+| ++..|++++.|++ |++||++++++++++..+.
T Consensus 153 ~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~T-IkIWDl~TGk~l~tL~g~~-------- 223 (356)
T 2w18_A 153 TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNN-IVIWNLKTGQLLKKMHIDD-------- 223 (356)
T ss_dssp SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSE-EEEEETTTCCEEEEEECCC--------
T ss_pred cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCc-EEEEECCCCcEEEEEcCCC--------
Confidence 236889999998654366667789999999999999 7799999999999 9999999999998886430
Q ss_pred CCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCE------------EEEEeCCCcEEEEEECCCCce
Q psy3710 237 NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR------------LATASYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 237 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------l~~~~~d~~~i~iwd~~~~~~ 304 (424)
.+...+.+++|+|+|++ +++|+.|++ |++||..+++.
T Consensus 224 ------------------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~ 272 (356)
T 2w18_A 224 ------------------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLS 272 (356)
T ss_dssp ---------------------------------CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEE
T ss_pred ------------------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEE
Confidence 11234555556665554 467889999 99999999998
Q ss_pred eeeec---cCCc------------EEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCC-ce
Q psy3710 305 LNELR---RDSS------------YLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDP-PC 368 (424)
Q Consensus 305 ~~~~~---~~~~------------~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 368 (424)
+..+. |+|. ++++++.|++|+|||+.+++++..+. .|... +.
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~----------------------gH~~~vvs 330 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLP----------------------PVSDQHWS 330 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEEC----------------------CC--CCCC
T ss_pred EEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEec----------------------CCCCCeEE
Confidence 77653 4443 57999999999999999988765533 23333 34
Q ss_pred EEEEecCCCeEEEEeccCcEEEEEe
Q psy3710 369 ICAFGADSNSIIVICADGSYYKFMF 393 (424)
Q Consensus 369 ~~~~s~~~~~l~~~~~dg~v~~~~~ 393 (424)
.++|+|||++|++|+.|++|++|++
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 5899999999999999999999996
No 107
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.9e-32 Score=240.48 Aligned_cols=277 Identities=12% Similarity=0.095 Sum_probs=202.5
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC----cEEEEEe-ecCCeEEEEecC--CceEEEe---
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK----QVVICLE-FNAPVKGVRLRR--DKIVVVL--- 116 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~--~~~~~~~--- 116 (424)
...|.+.|.+++|+|+++++++++ .|+.|++||+.++ +....+. |...|.+++|+| ++.++++
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCS-------SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEE-------TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CcccccceeEEEEcCCCCEEEEee-------CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 456899999999999999999988 6899999999876 3555665 889999999999 4655554
Q ss_pred eccEEEEeecCCC--------ceeEEEeeCCCCCeeEEEeecCC--CCeEEEeeccCCeEEEEeCCCCCCCCcccc----
Q psy3710 117 EGLIKVYTFIQCP--------QQLHVFETNPNPKGLCVLCPNSN--NSLLAFPGRKSGHVHLVDLADPERPPLDIA---- 182 (424)
Q Consensus 117 ~~~i~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~---- 182 (424)
|+.|++||+.... +.+..+..|. ..+.+++|+|+ +.++++ ++.||.|++||++++ .....+.
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~-~~~~~~~~~~~ 155 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSK--GSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEP-SDLRSWTLTSE 155 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCS--SCEEEEEECCGGGCSEEEE-EETTCEEEEEECSST-TCTTCCEEEEE
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccC--CceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCCh-HHhcccccccc
Confidence 8999999996321 3455566555 45889999999 999998 999999999999876 4333332
Q ss_pred ---------cccCCeEEEEEccC---CCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeE
Q psy3710 183 ---------AHEAPLSCIALNQT---GTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHV 250 (424)
Q Consensus 183 ---------~~~~~v~~~~~~~~---~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 250 (424)
.|...+.+++|+|+ +..+++++.++. +.+|+...++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~---------------------------- 206 (351)
T 3f3f_A 156 MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHV---------------------------- 206 (351)
T ss_dssp EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEE----------------------------
T ss_pred ccccccccCCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceee----------------------------
Confidence 67889999999997 899999999998 8777776554321
Q ss_pred EEEeCCCCCCCCeeeccCCCCeEEEEEcCCC----CEEEEEeCCCcEEEEEECCCCceeeeec------------cCCcE
Q psy3710 251 HLVDLADPERPPLDIAAHEAPLSCIALNQTG----TRLATASYKGTLIRVFDTGSGQKLNELR------------RDSSY 314 (424)
Q Consensus 251 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~~i~iwd~~~~~~~~~~~------------~~~~~ 314 (424)
...+.+|...|++++|+|++ ++|++++.|+. |++||++++....... +....
T Consensus 207 -----------~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (351)
T 3f3f_A 207 -----------AAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDM 274 (351)
T ss_dssp -----------EEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC-EEEEEEEECC-----------------------
T ss_pred -----------eeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe-EEEEeCCCCcCccccCCcccceeccCCCccccc
Confidence 11233789999999999998 89999999999 9999998765443321 11222
Q ss_pred EEEEe----CCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEE
Q psy3710 315 LCVSS----DHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYK 390 (424)
Q Consensus 315 l~~~~----~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~ 390 (424)
+..+. ....+.+|+....+. +..+..|...++.++|+|++++|++++.||.|++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~i 332 (351)
T 3f3f_A 275 DAQGRSDSNTEEKAELQSNLQVEL----------------------LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRL 332 (351)
T ss_dssp ----------------CCSEEEEE----------------------EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEE
T ss_pred ccccccccccceeeeecccccccE----------------------EEEEecccccEEEEEEcCCCCEEEEecCCCcEEE
Confidence 22222 122233333322221 2335567788999999999999999999999999
Q ss_pred EEecCCc
Q psy3710 391 FMFNSKG 397 (424)
Q Consensus 391 ~~~~~~~ 397 (424)
|++..+.
T Consensus 333 w~~~~~~ 339 (351)
T 3f3f_A 333 WKATYSN 339 (351)
T ss_dssp EEECTTS
T ss_pred EecCcCc
Confidence 9998543
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-32 Score=240.67 Aligned_cols=262 Identities=12% Similarity=0.193 Sum_probs=214.3
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc----EEEEEeecCCeEEEEecCCce-EEEe---ec
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ----VVICLEFNAPVKGVRLRRDKI-VVVL---EG 118 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~~---~~ 118 (424)
...|.+.|.+++|+|+++++++++ .|+.|++|++.+++ ......|...|.+++|+|++. ++++ ++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~-------~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITS-------WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEE-------TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEc-------CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence 346789999999999999999888 58999999998887 555556899999999999988 6665 89
Q ss_pred cEEEEee-cCCCceeEEEee--CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCC---------CCCCCcccccccC
Q psy3710 119 LIKVYTF-IQCPQQLHVFET--NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD---------PERPPLDIAAHEA 186 (424)
Q Consensus 119 ~i~v~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~ 186 (424)
.|++||+ . ..+ ...+.. |. ..+.+++|+| +..+++ ++.|+.|++||+++ . +++..+. |..
T Consensus 80 ~i~~wd~~~-~~~-~~~~~~~~~~--~~v~~l~~~~-~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~-~~~ 151 (342)
T 1yfq_A 80 EILKVDLIG-SPS-FQALTNNEAN--LGICRICKYG-DDKLIA-ASWDGLIEVIDPRNYGDGVIAVKN-LNSNNTK-VKN 151 (342)
T ss_dssp CEEEECSSS-SSS-EEECBSCCCC--SCEEEEEEET-TTEEEE-EETTSEEEEECHHHHTTBCEEEEE-SCSSSSS-SCC
T ss_pred eEEEEEecc-CCc-eEeccccCCC--CceEEEEeCC-CCEEEE-EcCCCeEEEEcccccccccccccC-CeeeEEe-eCC
Confidence 9999998 6 433 355655 54 4588999999 888888 99999999999986 4 5555665 889
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCC-ccee-eEE----ecceeeeeecC-CCCeEEEEeecCCeEEEEeCCCC-
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGS-GQKL-NEL----RRGLCVLCPNS-NNSLLAFPGRKSGHVHLVDLADP- 258 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~-~~~~-~~~----~~~~~~~~~~~-~~~~~~~~~~~dg~i~i~d~~~~- 258 (424)
.|.+++|+|++ +++++.|+. |++||+++ +... ... ...+..++++| ++..+++ ++.+|.|++|+++..
T Consensus 152 ~v~~~~~~~~~--l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~-~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 152 KIFTMDTNSSR--LIVGMNNSQ-VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC-SSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CEEEEEECSSE--EEEEESTTE-EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE-EETTSEEEEEECCTTC
T ss_pred ceEEEEecCCc--EEEEeCCCe-EEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE-EecCCcEEEEEEcCCC
Confidence 99999999987 999999999 99999988 5432 111 23477889999 7776655 889999999999887
Q ss_pred ----CCCCeeeccCCC---------CeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec-----------cCCcE
Q psy3710 259 ----ERPPLDIAAHEA---------PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-----------RDSSY 314 (424)
Q Consensus 259 ----~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-----------~~~~~ 314 (424)
......+..|.. .|.+++|+|++++|++++.||. |++||+.+++.+..+. |++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~ 306 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQTRKKIKNFAKFNEDSVVKIACSDNI 306 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECCCCSSSEEEEEEECSSE
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEEEcCccHhHhhhhhcccCCCceEecCCCCe
Confidence 355667777755 9999999999999999999999 9999999888776554 57889
Q ss_pred EEEEeCCCc-EEEEE
Q psy3710 315 LCVSSDHGT-VHVFS 328 (424)
Q Consensus 315 l~~~~~d~~-i~iw~ 328 (424)
|++++.||. .+.|.
T Consensus 307 l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 307 LCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEEEECTHHHHCSS
T ss_pred EEEEecCCccccccc
Confidence 999999987 44444
No 109
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-32 Score=263.75 Aligned_cols=258 Identities=12% Similarity=0.216 Sum_probs=206.2
Q ss_pred EEEeeCCCCCeeEEEeecCCC-CeEEEeeccCCeEEEEeCCCCCCC----CcccccccCCeEEEEEccCCCEEEEEecCC
Q psy3710 133 HVFETNPNPKGLCVLCPNSNN-SLLAFPGRKSGHVHLVDLADPERP----PLDIAAHEAPLSCIALNQTGTRLATASYKG 207 (424)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 207 (424)
..++.|... +.+++++|++ .+|++ |+.|+.|++||+...... ...+.+|...|.+++|+|++++|++++.|+
T Consensus 376 ~~l~~H~~~--V~~v~~~~~~~~~l~s-~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 376 GTMRAHTDM--VTAIATPIDNADIIVS-ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEECCSSC--EEEEECCTTCCSEEEE-EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred hhcccCCce--eEEEEecCCCCCEEEE-EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 456677644 8889999876 55665 999999999999864222 346789999999999999999999999999
Q ss_pred cEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC--CeeeccCCCCeEEEEEcCCC-
Q psy3710 208 TLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP--PLDIAAHEAPLSCIALNQTG- 281 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~- 281 (424)
. |++||+.+++....+..| +..++++|++..++ +++.|++|++||....... .....+|...|.+++|+|++
T Consensus 453 ~-v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 453 E-LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp E-EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred c-EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 9 999999999998888765 77889999988765 4999999999998654211 11224788999999999987
Q ss_pred -CEEEEEeCCCcEEEEEECCCCceeee------------eccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccC
Q psy3710 282 -TRLATASYKGTLIRVFDTGSGQKLNE------------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLP 348 (424)
Q Consensus 282 -~~l~~~~~d~~~i~iwd~~~~~~~~~------------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 348 (424)
..|++++.|+. |++||+++++.... ++|++++|++++.||.|++||+.+++++....
T Consensus 531 ~~~l~s~s~d~~-v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--------- 600 (694)
T 3dm0_A 531 QPTIVSASWDKT-VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--------- 600 (694)
T ss_dssp SCEEEEEETTSC-EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB---------
T ss_pred cceEEEEeCCCe-EEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec---------
Confidence 58999999999 99999998877654 56899999999999999999999987654321
Q ss_pred ccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeeee------------------------e
Q psy3710 349 KYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDV------------------------Y 404 (424)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~------------------------~ 404 (424)
+...+..++|+|++.+|++++ |+.|++|++. .+++++.. +
T Consensus 601 --------------~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (694)
T 3dm0_A 601 --------------ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLE-SKSIVEDLKVDLKAEAEKADNSGPAATKRKVIY 664 (694)
T ss_dssp --------------CSSCEEEEEECSSSSEEEEEE-TTEEEEEETT-TTEEEEEECCCCC----------------CCCC
T ss_pred --------------CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECC-CCCChhhhccccccccccccccccccCCceeEE
Confidence 124577899999998877665 6669999997 44443321 1
Q ss_pred hhhheecCCCceeeEEE
Q psy3710 405 IQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 405 ~~~~~~~~d~~~l~~~~ 421 (424)
...+.++|||++|+++.
T Consensus 665 ~~~l~~spdg~~l~sgs 681 (694)
T 3dm0_A 665 CTSLNWSADGSTLFSGY 681 (694)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred eeeEEEcCCCCEEEEEc
Confidence 23567999999999874
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=251.36 Aligned_cols=277 Identities=9% Similarity=0.074 Sum_probs=215.5
Q ss_pred cCCceEEEEECCCCCeeEeecCCeEEEEeCCcCc---cccccc-------------------------------------
Q psy3710 9 YKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLK---EKERQD------------------------------------- 48 (424)
Q Consensus 9 h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~---~~~~~~------------------------------------- 48 (424)
...++.+++|+|+|++|+++.++.|++||+.+++ .+....
T Consensus 3 ~~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 3 VIHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp EECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3467999999999998888877779999998887 321111
Q ss_pred -----------------ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC--CCcEEEEEe---ecCCeEEEE
Q psy3710 49 -----------------FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL--KKQVVICLE---FNAPVKGVR 106 (424)
Q Consensus 49 -----------------~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~~---~~~~v~~~~ 106 (424)
.|.+.|.+++|+|++++|+++++ .|+.|++||+. +++.+..+. +...|.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEG------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC------CCCeEEEEECcCCCCceeeeeecccCCCCceEEE
Confidence 12336999999999999744443 47999999999 888888774 568899999
Q ss_pred ecCCceEEEe---eccEEEEeecCCCcee----EEEeeCCCCCeeEEEeecCC---CCeEEEeeccCCeEEEEeCCCCCC
Q psy3710 107 LRRDKIVVVL---EGLIKVYTFIQCPQQL----HVFETNPNPKGLCVLCPNSN---NSLLAFPGRKSGHVHLVDLADPER 176 (424)
Q Consensus 107 ~~~~~~~~~~---~~~i~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~dg~i~i~d~~~~~~ 176 (424)
|+|++..+++ ++.+++|++. ..... ..+..|.. .+.+++|+|+ +++|++ |+.|+.|++||+.++ .
T Consensus 157 ~sp~~~~l~~~~~~g~v~~~~~~-~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s-~~~d~~i~vwd~~~~-~ 231 (450)
T 2vdu_B 157 IAEDDTTVIIADKFGDVYSIDIN-SIPEEKFTQEPILGHVS--MLTDVHLIKDSDGHQFIIT-SDRDEHIKISHYPQC-F 231 (450)
T ss_dssp ECTTSSEEEEEETTSEEEEEETT-SCCCSSCCCCCSEECSS--CEEEEEEEECTTSCEEEEE-EETTSCEEEEEESCT-T
T ss_pred EcCCCCEEEEEeCCCcEEEEecC-CcccccccceeeecccC--ceEEEEEcCCCCCCcEEEE-EcCCCcEEEEECCCC-c
Confidence 9999977765 6889999986 44332 25666664 4888999999 888887 999999999999986 4
Q ss_pred CCcc-cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec----------------------------c
Q psy3710 177 PPLD-IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR----------------------------G 227 (424)
Q Consensus 177 ~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~----------------------------~ 227 (424)
.+.. +.+|...|.+++|+ ++++|++++.|+. |++||+++++.+..+.. .
T Consensus 232 ~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (450)
T 2vdu_B 232 IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFA 309 (450)
T ss_dssp CEEEECCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCC
T ss_pred eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEE
Confidence 5544 66899999999999 9999999999999 99999999998877752 2
Q ss_pred eeeeeecCCCCeEEEEeecCCeEEEEeC--CCCC--CCCeeeccCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEE
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSGHVHLVDL--ADPE--RPPLDIAAHEAPLSCIALNQTGTRLATASY------KGTLIRVF 297 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg~i~i~d~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~~i~iw 297 (424)
+..++++|++..+++++..++.|++|++ .... .....+..| ..|.+++|+|++.++++++. +.. |.+|
T Consensus 310 v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~-i~v~ 387 (450)
T 2vdu_B 310 VSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNF-AKFI 387 (450)
T ss_dssp EEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCS-EEEE
T ss_pred EEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcc-eEEE
Confidence 5567889988888875558999999999 4332 233455666 88999999996544444443 344 6777
Q ss_pred ECC
Q psy3710 298 DTG 300 (424)
Q Consensus 298 d~~ 300 (424)
.+.
T Consensus 388 ~~~ 390 (450)
T 2vdu_B 388 EYN 390 (450)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-31 Score=244.10 Aligned_cols=273 Identities=11% Similarity=0.080 Sum_probs=211.9
Q ss_pred CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc---EEEEEee------------------------------
Q psy3710 52 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ---VVICLEF------------------------------ 98 (424)
Q Consensus 52 ~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~---~~~~~~~------------------------------ 98 (424)
.++.+++|++++++++++. ++.|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~--------~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII--------KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKL 76 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE--------TTEEEEEEEETTTEEEEEEEEECCC----------------------------
T ss_pred ccEEEEEecCCCCEEEEEe--------CCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccc
Confidence 4678899999999666665 6899999999998 5555441
Q ss_pred -------------------------cCCeEEEEecCCceEE-Ee---eccEEEEeecC-CCceeEEEeeCCCCCeeEEEe
Q psy3710 99 -------------------------NAPVKGVRLRRDKIVV-VL---EGLIKVYTFIQ-CPQQLHVFETNPNPKGLCVLC 148 (424)
Q Consensus 99 -------------------------~~~v~~~~~~~~~~~~-~~---~~~i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~ 148 (424)
...|.+++|+|++..+ ++ |+.|++||+.. .++.+..+..+..+..+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 77 KSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEE
T ss_pred ccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEE
Confidence 1159999999999775 54 79999999962 466777776555556689999
Q ss_pred ecCCCCeEEEeeccCCeEEEEeCCCCCC---CCcccccccCCeEEEEEccC---CCEEEEEecCCcEEEEEECCCcceee
Q psy3710 149 PNSNNSLLAFPGRKSGHVHLVDLADPER---PPLDIAAHEAPLSCIALNQT---GTRLATASYKGTLIRVFDTGSGQKLN 222 (424)
Q Consensus 149 ~~~~~~~l~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~~i~iwd~~~~~~~~ 222 (424)
|+|++++|++ |+.+|.|++|++.+... ....+.+|...|.+++|+|+ +++|++++.|+. |++||+++++.+.
T Consensus 157 ~sp~~~~l~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~-i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 157 IAEDDTTVII-ADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH-IKISHYPQCFIVD 234 (450)
T ss_dssp ECTTSSEEEE-EETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC-EEEEEESCTTCEE
T ss_pred EcCCCCEEEE-EeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc-EEEEECCCCceee
Confidence 9999999998 99999999999987622 22377889999999999999 999999999999 9999998776544
Q ss_pred EEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCC
Q psy3710 223 ELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 302 (424)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 302 (424)
.+ +.+|...|.+++|+ ++++|++++.|+. |++||++++
T Consensus 235 ~~----------------------------------------~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~ 272 (450)
T 2vdu_B 235 KW----------------------------------------LFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTG 272 (450)
T ss_dssp EE----------------------------------------CCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTC
T ss_pred ee----------------------------------------ecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCC
Confidence 32 12688899999999 9999999999999 999999988
Q ss_pred ceeeeec-------------------------------------cCCcEEEEEe-CCCcEEEEEc--cccccccccccce
Q psy3710 303 QKLNELR-------------------------------------RDSSYLCVSS-DHGTVHVFSV--DEAQKINKQSSLA 342 (424)
Q Consensus 303 ~~~~~~~-------------------------------------~~~~~l~~~~-~d~~i~iw~~--~~~~~~~~~~~~~ 342 (424)
+++..+. |++++|++++ .|+.|++|++ .++..+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~----- 347 (450)
T 2vdu_B 273 KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLAL----- 347 (450)
T ss_dssp CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEE-----
T ss_pred cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceee-----
Confidence 8665543 4588999988 8999999999 44322111
Q ss_pred eeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec------cCcEEEEEecCC
Q psy3710 343 SASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA------DGSYYKFMFNSK 396 (424)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~------dg~v~~~~~~~~ 396 (424)
...+..+ +.+..++|+|++.++++++. +..|.+|.++..
T Consensus 348 --------------~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 348 --------------KQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp --------------EEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred --------------ccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 1123344 67889999996544444343 556899998764
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.5e-31 Score=242.63 Aligned_cols=348 Identities=12% Similarity=0.071 Sum_probs=247.7
Q ss_pred cccCCceEEEEECCCCCeeEeecCCe--EEEEeCCcCcccccccccCCCeeeEE---EeccCceEEEEeCCcCC------
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDG--FRIYNCDPLKEKERQDFTDGGLGHVE---MLFRCNYLALVGGGTHP------ 75 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~--i~iw~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~l~~~~~~~~~------ 75 (424)
......|..+.|+|....++...... .+++.... ...+..++ |+++++.++.++.....
T Consensus 24 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 93 (433)
T 3bws_A 24 EKNGTEIVKFSIHPYKGTVIRLGEEILPFKVLEMDK----------NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRI 93 (433)
T ss_dssp ---CEEEEEEEEECCTTCEEEETTEECCEEEEEEET----------TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEE
T ss_pred ccCCcEEEEEecccccCceEEcCceecceeeeeccc----------CCccEEEEEeeccCCCcEEEEEEccccCcceeee
Confidence 34555677788888654444333222 34433221 12233444 55555555444322100
Q ss_pred -CcCCC--eEEEEECCCC--cEEEEEeecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEee---CCCCCee
Q psy3710 76 -KYPNN--RVMIWDDLKK--QVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFET---NPNPKGL 144 (424)
Q Consensus 76 -~~~d~--~i~iwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~---~~~~~~~ 144 (424)
...++ .|..+|..++ +.+..+.....+.+++|+|++.++++ ++.|++||+. +++....... ..+...+
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~v 172 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDIN-SGQTVRLSPPEKYKKKLGFV 172 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETT-TCCEEEECCCHHHHTTCCEE
T ss_pred cccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECC-CCeEeeecCcccccccCCce
Confidence 00234 5555555445 55666666677789999998777765 6789999996 5665553221 1223458
Q ss_pred EEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEE-ecCCcEEEEEECCCcceeeE
Q psy3710 145 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATA-SYKGTLIRVFDTGSGQKLNE 223 (424)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~~i~iwd~~~~~~~~~ 223 (424)
.++++++++.++++ ++.|+.|++||++++ +....+..|...+.+++|+|+++.++++ +.++. |++||+++++.+..
T Consensus 173 ~~~~~~~~~~~~~s-~~~d~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 173 ETISIPEHNELWVS-QMQANAVHVFDLKTL-AYKATVDLTGKWSKILLYDPIRDLVYCSNWISED-ISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEGGGTEEEEE-EGGGTEEEEEETTTC-CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEE
T ss_pred eEEEEcCCCEEEEE-ECCCCEEEEEECCCc-eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCc-EEEEECCCCcEEEE
Confidence 88899999988887 999999999999876 6667777899999999999999988554 47898 99999999988877
Q ss_pred Eecc--eeeeeecCCCCeEEEEee-------cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEE-EEEeCCCcE
Q psy3710 224 LRRG--LCVLCPNSNNSLLAFPGR-------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL-ATASYKGTL 293 (424)
Q Consensus 224 ~~~~--~~~~~~~~~~~~~~~~~~-------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~~ 293 (424)
+..+ +..++++|++..+++++. .|+.|++||+.+++. .. ...|...+.+++|+|+++.+ ++++.++.
T Consensus 250 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~-~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~- 326 (433)
T 3bws_A 250 TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL-ID-TIGPPGNKRHIVSGNTENKIYVSDMCCSK- 326 (433)
T ss_dssp CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE-EE-EEEEEECEEEEEECSSTTEEEEEETTTTE-
T ss_pred ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE-Ee-eccCCCCcceEEECCCCCEEEEEecCCCE-
Confidence 7644 677899999998888554 578999999987653 22 22566689999999999755 56688999
Q ss_pred EEEEECCCCceeee-----------eccCCcEEEEEeC---------------CCcEEEEEccccccccccccceeeecc
Q psy3710 294 IRVFDTGSGQKLNE-----------LRRDSSYLCVSSD---------------HGTVHVFSVDEAQKINKQSSLASASFL 347 (424)
Q Consensus 294 i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~---------------d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (424)
|++||+.+++.+.. ++|+++++++++. ||.|++||+.+++.+....
T Consensus 327 v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~-------- 398 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE-------- 398 (433)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE--------
T ss_pred EEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec--------
Confidence 99999999877654 4688998888876 5799999999876543321
Q ss_pred CccccCCceeeEEeecCCCceEEEEecCCCeEEEEec-cCcEEEEEec
Q psy3710 348 PKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA-DGSYYKFMFN 394 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~-dg~v~~~~~~ 394 (424)
. ...+..++|+|++++|++++. |+.|++|+++
T Consensus 399 --------------~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 399 --------------A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp --------------C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred --------------C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 1 234678999999999998875 9999999986
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=274.72 Aligned_cols=253 Identities=14% Similarity=0.136 Sum_probs=202.0
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCe-EEEEeCC--cCcccccccccCCCeeeEEEecc--CceEEEEeCCcCCCcC
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCD--PLKEKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYP 78 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~~~~~~~~ 78 (424)
..+.+|.+.|++++|+|+|++|++|+.++ |++||+. +.+.......|.+.|.+++|+++ ++.+++++ .
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s-------~ 75 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------Y 75 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE-------T
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe-------C
Confidence 45789999999999999999999999888 9999987 44445556678999999999988 88898888 6
Q ss_pred CCeEEEEECCCCc--EEEEEe-ecCCeEEEEecCC--ceEEEe---eccEEEEeecCCC-ceeEEEeeCCCCCeeEEEee
Q psy3710 79 NNRVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCP-QQLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 79 d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 149 (424)
|+.|++||+.+++ .+..+. |...|.+++|+|+ +..+++ ||.|++||++... .....+..+. ..+.++.|
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~--~~v~~l~~ 153 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA--IGVNSASW 153 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS--SCEEEEEE
T ss_pred CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC--CceEEEEe
Confidence 8999999999886 455555 7899999999998 766654 8999999997331 2333444444 55889999
Q ss_pred cC-------------CCCeEEEeeccCCeEEEEeCCCCC---CCCcccccccCCeEEEEEccC---CCEEEEEecCCcEE
Q psy3710 150 NS-------------NNSLLAFPGRKSGHVHLVDLADPE---RPPLDIAAHEAPLSCIALNQT---GTRLATASYKGTLI 210 (424)
Q Consensus 150 ~~-------------~~~~l~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~~i 210 (424)
+| ++..+++ |+.||.|++||++++. .....+.+|...|.+++|+|+ ++++++++.|+. |
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~s-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I 231 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-C 231 (753)
T ss_dssp CCCC---------CGGGCCEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-E
T ss_pred cCcccccccccccCCCCCEEEE-EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-E
Confidence 99 5888888 9999999999998753 233466789999999999999 899999999999 9
Q ss_pred EEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC
Q psy3710 211 RVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK 290 (424)
Q Consensus 211 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 290 (424)
++||+++++..... .......|...|++++|+|+|++|++++.|
T Consensus 232 ~iwd~~~~~~~~~~------------------------------------~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 232 IIWTQDNEQGPWKK------------------------------------TLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp EEEEESSSSSCCBC------------------------------------CBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred EEecCCCCCCccee------------------------------------EEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 99999875421100 112223688899999999999999999999
Q ss_pred CcEEEEEECCCCce
Q psy3710 291 GTLIRVFDTGSGQK 304 (424)
Q Consensus 291 ~~~i~iwd~~~~~~ 304 (424)
|. |++|++.++..
T Consensus 276 g~-I~vwd~~~~~~ 288 (753)
T 3jro_A 276 NK-VTLWKENLEGK 288 (753)
T ss_dssp SC-EECCBCCSSSC
T ss_pred CE-EEEEecCCCCC
Confidence 99 99999986543
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-32 Score=245.24 Aligned_cols=243 Identities=15% Similarity=0.205 Sum_probs=195.3
Q ss_pred eeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCC-CCCCcccccccCCeEEEEEccC--CCEEEEEecCC
Q psy3710 131 QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP-ERPPLDIAAHEAPLSCIALNQT--GTRLATASYKG 207 (424)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 207 (424)
.+..+.+|..+ +.+++|+|++++|++ |+.||.|++||+... ......+.+|...|.+++|+|+ +++|++++.|+
T Consensus 3 ~~~~~~~h~~~--v~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 3 MVVIANAHNEL--IHDAVLDYYGKRLAT-CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp --CCEEECCCC--EEEEEECSSSSEEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccEEecCCccc--EEEEEEcCCCCEEEE-EECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 45567777755 889999999999998 999999999999732 1455678899999999999987 89999999999
Q ss_pred cEEEEEECCCcc--eeeEEec---ceeeeeecCCC-CeEEEEeecCCeEEEEeCCCCCC-CCeeeccCCCCeEEEEEcC-
Q psy3710 208 TLIRVFDTGSGQ--KLNELRR---GLCVLCPNSNN-SLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQ- 279 (424)
Q Consensus 208 ~~i~iwd~~~~~--~~~~~~~---~~~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~- 279 (424)
. |++||+++++ .+..+.. .+..++++|+. ..++++++.|+.|++||++.... ....+..|...|.+++|+|
T Consensus 80 ~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 80 K-VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp C-EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred E-EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 9 9999999886 5555543 37888999983 34455599999999999998753 3345678999999999999
Q ss_pred ------------CCCEEEEEeCCCcEEEEEECCCCcee----e------------eeccC---CcEEEEEeCCCcEEEEE
Q psy3710 280 ------------TGTRLATASYKGTLIRVFDTGSGQKL----N------------ELRRD---SSYLCVSSDHGTVHVFS 328 (424)
Q Consensus 280 ------------~~~~l~~~~~d~~~i~iwd~~~~~~~----~------------~~~~~---~~~l~~~~~d~~i~iw~ 328 (424)
++.+|++++.|+. |++||+++++.. . .|+|+ +++|++++.||.|++||
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp C----------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999 999999876422 1 25688 89999999999999999
Q ss_pred ccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 329 VDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
+.+++....... .....+...+..++|+|++++|++++.||.|++|++..
T Consensus 238 ~~~~~~~~~~~~-----------------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 238 QDNEQGPWKKTL-----------------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ESSTTSCCEEEE-----------------SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCccceeee-----------------eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 988642111000 00112456788999999999999999999999999974
No 115
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-31 Score=237.36 Aligned_cols=261 Identities=14% Similarity=0.076 Sum_probs=200.6
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc--EEEEEe-ecCCeEEEEecCCceEEEe---eccE
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ--VVICLE-FNAPVKGVRLRRDKIVVVL---EGLI 120 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i 120 (424)
+..|.++|.+++|+|+++++++++ .|+.|++||+.+++ .+..+. |...|.+++|+|++.++++ |+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~-------~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICP-------NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEEC-------SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEe-------CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 445788999999999999998887 58999999999887 777777 8899999999999977765 8999
Q ss_pred EEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC---CCcccccccCCeEEEEEccCC
Q psy3710 121 KVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER---PPLDIAAHEAPLSCIALNQTG 197 (424)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~ 197 (424)
++||+. ..+....+....+...+.+++|+|+++++++ ++.||.|++||++.... .......|...|.+++|+|++
T Consensus 77 ~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 77 YVWTLK-GRTWKPTLVILRINRAARCVRWAPNEKKFAV-GSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEEE-TTEEEEEEECCCCSSCEEEEEECTTSSEEEE-EETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEEECC-CCeeeeeEEeecCCCceeEEEECCCCCEEEE-EeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 999996 5555555444344456899999999999998 99999999999997532 122336789999999999999
Q ss_pred CEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCC-CCCCCCeeeccCCCCeEEEE
Q psy3710 198 TRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA-DPERPPLDIAAHEAPLSCIA 276 (424)
Q Consensus 198 ~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~v~~~~ 276 (424)
++|++++.|+. |++||++.......... ..|..+ ........+..|...|.+++
T Consensus 155 ~~l~~~~~dg~-i~~~d~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 155 VLLAAGSCDFK-CRIFSAYIKEVEERPAP------------------------TPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp SEEEEEETTSC-EEEEECCCTTTSCCCCC------------------------BTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred CEEEEEcCCCC-EEEEEcccccccccccc------------------------cccccccchhhheEecCCCCCeEEEEE
Confidence 99999999999 99999865432111000 000000 00112334457899999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCce
Q psy3710 277 LNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWS 356 (424)
Q Consensus 277 ~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (424)
|+|++++|++++.|+. |++||+++++.+..+.
T Consensus 210 ~~~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~----------------------------------------------- 241 (372)
T 1k8k_C 210 FSANGSRVAWVSHDST-VCLADADKKMAVATLA----------------------------------------------- 241 (372)
T ss_dssp ECSSSSEEEEEETTTE-EEEEEGGGTTEEEEEE-----------------------------------------------
T ss_pred ECCCCCEEEEEeCCCE-EEEEECCCCceeEEEc-----------------------------------------------
Confidence 9999999999999988 8888887655433321
Q ss_pred eeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 357 FCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 357 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
.|..++..++|+|++++|+++ .||.|++|++..
T Consensus 242 -----~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 242 -----SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -----CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred -----cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 123456788999999988877 899999999985
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.3e-31 Score=242.87 Aligned_cols=306 Identities=13% Similarity=0.089 Sum_probs=234.6
Q ss_pred cCCceEEEE---ECCCCCeeEee--------------cCCe-EEEEeCCc--C--cccccccccCCCeeeEEEeccCceE
Q psy3710 9 YKNGLLYAG---FNQDQGCFACG--------------MEDG-FRIYNCDP--L--KEKERQDFTDGGLGHVEMLFRCNYL 66 (424)
Q Consensus 9 h~~~V~~~~---~s~~g~~la~g--------------~~~~-i~iw~~~~--~--~~~~~~~~~~~~i~~~~~~~~~~~l 66 (424)
....+..++ |+|++..+++. ..++ +.||.++. + +....... ...+.+++|+| +..+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~-~~~~ 136 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKT-GFQPKSVRFID-NTRL 136 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEEC-SSCBCCCEESS-SSEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcC-CCCceEEEEeC-CCeE
Confidence 345677888 88887766532 1222 35555544 3 22222222 34466899999 4444
Q ss_pred EEEeCCcCCCcCCCeEEEEECCCCcEEEEEe------ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEee
Q psy3710 67 ALVGGGTHPKYPNNRVMIWDDLKKQVVICLE------FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFET 137 (424)
Q Consensus 67 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~ 137 (424)
++++. .++.|++||+.+++.+..+. |...+.+++|++++.++++ ++.|++||++ +++.+..+..
T Consensus 137 ~~~~~------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-~~~~~~~~~~ 209 (433)
T 3bws_A 137 AIPLL------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-TLAYKATVDL 209 (433)
T ss_dssp EEEBT------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-TCCEEEEEEC
T ss_pred EEEeC------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-CceEEEEEcC
Confidence 44443 36899999999999887432 4568999999999987776 7899999996 6777777775
Q ss_pred CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe--------cCCcE
Q psy3710 138 NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS--------YKGTL 209 (424)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~~ 209 (424)
+. ..+.+++++|+++.++++++.++.|++||++++ +....+.. ...+.+++|+|+++.+++++ .|+.
T Consensus 210 ~~--~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~- 284 (433)
T 3bws_A 210 TG--KWSKILLYDPIRDLVYCSNWISEDISVIDRKTK-LEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGR- 284 (433)
T ss_dssp SS--SSEEEEEEETTTTEEEEEETTTTEEEEEETTTT-EEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEE-
T ss_pred CC--CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC-cEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCe-
Confidence 55 447889999999998775778999999999875 44444544 45589999999999999988 4788
Q ss_pred EEEEECCCcceeeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEE
Q psy3710 210 IRVFDTGSGQKLNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 210 i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 287 (424)
|++||+++++.+..+. .....++++|+++.++++++.++.|++||+.+++. ...+ .+...+.+++|+|++++++++
T Consensus 285 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~-~~~~-~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV-QKSI-PVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp EEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE-EEEE-ECSSSEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE-EEEe-cCCCCCCeEEEcCCCCEEEEE
Confidence 9999999998777663 45677899999999999899999999999987653 3333 477889999999999999888
Q ss_pred eC---------------CCcEEEEEECCCCceeee-----------eccCCcEEEEEeC-CCcEEEEEccc
Q psy3710 288 SY---------------KGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSSD-HGTVHVFSVDE 331 (424)
Q Consensus 288 ~~---------------d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~-d~~i~iw~~~~ 331 (424)
+. ||. |++||+.+++.+.. ++|++++|++++. |+.|++|+++.
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ecCCCccccccccccccceE-EEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 87 468 99999999887664 5689999988875 99999999864
No 117
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.7e-32 Score=243.48 Aligned_cols=265 Identities=12% Similarity=0.176 Sum_probs=210.6
Q ss_pred eEEEEecCCceEEEe----eccEEEEeecCCCc---eeEEEeeCCCCCeeEEEeecC-CCCeEEEeeccCCeEEEEeCCC
Q psy3710 102 VKGVRLRRDKIVVVL----EGLIKVYTFIQCPQ---QLHVFETNPNPKGLCVLCPNS-NNSLLAFPGRKSGHVHLVDLAD 173 (424)
Q Consensus 102 v~~~~~~~~~~~~~~----~~~i~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~dg~i~i~d~~~ 173 (424)
...++++|+...++. +|.|++|++...++ ....+..|. ..+.+++|+| ++++|++ |+.||.|++||+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s-~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT--APVLDIAWCPHNDNVIAS-GSEDCTVMVWEIPD 113 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS--SCEEEEEECTTCTTEEEE-EETTSEEEEEECCT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCC--CCEEEEEeCCCCCCEEEE-EeCCCeEEEEEccC
Confidence 345788888866642 89999999864332 333455565 4589999999 8888888 99999999999987
Q ss_pred CC------CCCcccccccCCeEEEEEccCC-CEEEEEecCCcEEEEEECCCcceeeEE--ec---ceeeeeecCCCCeEE
Q psy3710 174 PE------RPPLDIAAHEAPLSCIALNQTG-TRLATASYKGTLIRVFDTGSGQKLNEL--RR---GLCVLCPNSNNSLLA 241 (424)
Q Consensus 174 ~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~~i~iwd~~~~~~~~~~--~~---~~~~~~~~~~~~~~~ 241 (424)
+. .+...+.+|...|.+++|+|++ ++|++++.|+. |++||+++++.+..+ .. .+..++++|++..++
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV-ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC-EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE-EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 63 4567788999999999999998 69999999999 999999999998888 33 378899999887666
Q ss_pred EEeecCCeEEEEeCCCCCCCCeee-ccCCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEEECCCCce-ee---------
Q psy3710 242 FPGRKSGHVHLVDLADPERPPLDI-AAHEAP-LSCIALNQTGTRLATA---SYKGTLIRVFDTGSGQK-LN--------- 306 (424)
Q Consensus 242 ~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~~i~iwd~~~~~~-~~--------- 306 (424)
. ++.|+.|++||+++++. ...+ ..|.+. +.+++|+|++++|+++ +.|+. |++||+++++. +.
T Consensus 193 ~-~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~ 269 (402)
T 2aq5_A 193 T-SCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQELDTSSG 269 (402)
T ss_dssp E-EETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEECCCCSS
T ss_pred E-EecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEeccCCCc
Confidence 5 88999999999998764 3444 577766 8999999999999999 78999 99999988654 11
Q ss_pred ----eeccCCcEEEE-EeCCCcEEEEEcccccc-ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEE
Q psy3710 307 ----ELRRDSSYLCV-SSDHGTVHVFSVDEAQK-INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSII 380 (424)
Q Consensus 307 ----~~~~~~~~l~~-~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 380 (424)
.|+|++++|++ ++.|+.|++||+.+++. +.... .+. +.+++..++|+|++.+++
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~-------------------~~~-~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS-------------------MFS-SKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE-------------------EEC-CSSCCSEEEECCGGGSCG
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec-------------------ccc-cCCcccceEEecccccce
Confidence 25689998865 55799999999998663 21111 111 456788999999999876
Q ss_pred EEeccCcEEEEEecC
Q psy3710 381 VICADGSYYKFMFNS 395 (424)
Q Consensus 381 ~~~~dg~v~~~~~~~ 395 (424)
+ .++.+++|++..
T Consensus 330 s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 330 N--KCEIARFYKLHE 342 (402)
T ss_dssp G--GTEEEEEEEEET
T ss_pred e--cceeEEEEEcCC
Confidence 4 577999999984
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-31 Score=243.88 Aligned_cols=260 Identities=13% Similarity=0.133 Sum_probs=201.2
Q ss_pred cccccCCceEEEEECCC-CCeeEeecCCe-EEEEeCCc----------CcccccccccCCCeeeEEEeccCc-eEEEEeC
Q psy3710 5 TSSTYKNGLLYAGFNQD-QGCFACGMEDG-FRIYNCDP----------LKEKERQDFTDGGLGHVEMLFRCN-YLALVGG 71 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~-g~~la~g~~~~-i~iw~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 71 (424)
.+.+|.+.|++++|+|+ +.+||+++.++ |++|++.+ .+.......|...+.+++|+|++. .+++++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~- 201 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS- 201 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC-
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe-
Confidence 46789999999999998 68899999888 99999976 344555566889999999999998 666665
Q ss_pred CcCCCcCCCeEEEEECCCCc----E---EEEEe-ecCCeEEEEecC-CceEEEe---eccEEEEeecCCC--ceeEEEee
Q psy3710 72 GTHPKYPNNRVMIWDDLKKQ----V---VICLE-FNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCP--QQLHVFET 137 (424)
Q Consensus 72 ~~~~~~~d~~i~iwd~~~~~----~---~~~~~-~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~--~~~~~~~~ 137 (424)
.|+.|++|++.++. . ...+. |...|.+++|+| ++.++++ ++.|++||++... +.+..+..
T Consensus 202 ------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 202 ------DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp ------TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred ------CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 58999999998732 2 23343 788999999999 5555544 8999999997332 56666766
Q ss_pred CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC-EEEEEecCCcEEEEEECC
Q psy3710 138 NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTG 216 (424)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~ 216 (424)
|. ..+.+++|+|++..++++|+.||.|++||++....++..+..|...|.+++|+|+++ +|++++.|+. |++||+.
T Consensus 276 ~~--~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~ 352 (430)
T 2xyi_A 276 HT--AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLS 352 (430)
T ss_dssp CS--SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGG
T ss_pred CC--CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCC
Confidence 65 448899999999864444999999999999986577888999999999999999985 6899999999 9999997
Q ss_pred CcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEE
Q psy3710 217 SGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIR 295 (424)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~ 295 (424)
........... .++ .........+|...|++++|+|+++ +|++++.|+. |+
T Consensus 353 ~~~~~~~~~~~------------------~~~---------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~-i~ 404 (430)
T 2xyi_A 353 KIGEEQSTEDA------------------EDG---------PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI-MQ 404 (430)
T ss_dssp GTTCCCCHHHH------------------HHC---------CTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE-EE
T ss_pred CCccccCcccc------------------ccC---------CcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC-EE
Confidence 64321110000 000 0011223347899999999999998 8999999999 99
Q ss_pred EEECCCC
Q psy3710 296 VFDTGSG 302 (424)
Q Consensus 296 iwd~~~~ 302 (424)
+|++...
T Consensus 405 iw~~~~~ 411 (430)
T 2xyi_A 405 VWQMAEN 411 (430)
T ss_dssp EEEECHH
T ss_pred EeEcccc
Confidence 9998653
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.2e-31 Score=239.28 Aligned_cols=222 Identities=10% Similarity=0.059 Sum_probs=168.9
Q ss_pred EeecCCCCeEEEeeccCCeEEEEeCCCCCC----CCcccccccCCeEEEEEcc--------CCCEEEEEecCCcEEEEEE
Q psy3710 147 LCPNSNNSLLAFPGRKSGHVHLVDLADPER----PPLDIAAHEAPLSCIALNQ--------TGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~~i~iwd 214 (424)
..+.+++.++++ |+.|++|++||.+.+.. ....+.+|.+.|.+++|+| ++++|++++.|++ |++||
T Consensus 95 ~~~~~~~~~las-~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t-v~~Wd 172 (393)
T 4gq1_A 95 NSSPVYSLFLAC-VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT-LIIWR 172 (393)
T ss_dssp --CCEEEEEEEE-EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE-EEEEE
T ss_pred eecCCCCCEEEE-EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe-EEEEE
Confidence 344556667777 99999999999987521 2345789999999999998 7899999999999 99999
Q ss_pred CCCcceeeEEec---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCe------------------------eecc
Q psy3710 215 TGSGQKLNELRR---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL------------------------DIAA 267 (424)
Q Consensus 215 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~------------------------~~~~ 267 (424)
++++.++..+.. .+..++|+|++..++++|+.|+.|++||+++++.... ...+
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 988776655543 3778999999998888899999999999987653211 1236
Q ss_pred CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEECCCCceeeeec--------------------------------cCCcE
Q psy3710 268 HEAPLSCIALN-QTGTRLATASYKGTLIRVFDTGSGQKLNELR--------------------------------RDSSY 314 (424)
Q Consensus 268 ~~~~v~~~~~~-~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--------------------------------~~~~~ 314 (424)
|...+.+++|+ |+++.|++++.|++ +++||+.+++....+. .++.+
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF 331 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence 78889999987 79999999999999 9999998776544321 14457
Q ss_pred EEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 315 LCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 315 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+++|+.||.|++||+.+++.... ...+..+|..++|+|||++||+++.+| +.+|++.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~~~----------------------~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSNSI----------------------PIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCCEE----------------------EEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEECCCCEEEEEECCCCcEEEE----------------------ecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 78888999999999998765322 334567899999999999999998665 6666654
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=234.89 Aligned_cols=259 Identities=12% Similarity=0.143 Sum_probs=185.3
Q ss_pred EeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEee
Q psy3710 59 MLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFET 137 (424)
Q Consensus 59 ~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~ 137 (424)
+.++++.+++++ .|++|++||+.+++.+..+. ...|.++.++|+ .+.++ |+.|++|+.. .
T Consensus 44 ~~~d~~~l~sg~-------~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~-~~s~s~D~~i~~w~~~-~--------- 104 (343)
T 3lrv_A 44 MYYDKWVCMCRC-------EDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA-IISRGPCNRLLLLYPG-N--------- 104 (343)
T ss_dssp SSEEEEEEEEEE-------ETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS-EEEECSTTEEEEEETT-T---------
T ss_pred hcCCCCEEEEEC-------CCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc-eEEecCCCeEEEEEcc-C---------
Confidence 345566666666 57888888887777665554 233444444444 11111 4444444432 1
Q ss_pred CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccc-ccccCCeEEEEEcc--CCCEEEEEecCCcEEEEEE
Q psy3710 138 NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAPLSCIALNQ--TGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~d~~~i~iwd 214 (424)
.+.+|++.+. +.+... ..|.++|.+++|+| +++++++++.|+. |++||
T Consensus 105 ---------------------------~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~-i~~wd 155 (343)
T 3lrv_A 105 ---------------------------QITILDSKTN-KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGT-IGFQS 155 (343)
T ss_dssp ---------------------------EEEEEETTTC-CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCC-EEEEE
T ss_pred ---------------------------ceEEeecCCc-ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCc-EEEEE
Confidence 2223344443 222222 26678999999999 9999999999999 99999
Q ss_pred CCCcceeeEEec----ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEEeC
Q psy3710 215 TGSGQKLNELRR----GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 215 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
+++++....... .+..++++|++..++. |+.||.|++||+++++.....+.. |..+|++++|+|++.+|++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las-g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 156 YEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL-YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp SSSSCEEEEECCCSSCCCCEEEECTTSCEEEE-ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred CCCCcEEEEEecCCCCceEEEEECCCCCEEEE-EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 999988765532 3678899998876655 899999999999998866466667 9999999999999999999995
Q ss_pred CCcEEEEEECCCCcee-----------------eeeccCCcEEEEEeC-CCcEEEEEccccccccccccceeeeccCccc
Q psy3710 290 KGTLIRVFDTGSGQKL-----------------NELRRDSSYLCVSSD-HGTVHVFSVDEAQKINKQSSLASASFLPKYF 351 (424)
Q Consensus 290 d~~~i~iwd~~~~~~~-----------------~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 351 (424)
+ . |++||+++++.+ ..|+|++++|++++. |+.+++|++......
T Consensus 235 ~-~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~---------------- 296 (343)
T 3lrv_A 235 Q-T-VVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN---------------- 296 (343)
T ss_dssp S-B-EEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS----------------
T ss_pred C-e-EEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc----------------
Confidence 5 8 999999987653 356789999999998 999999999764421
Q ss_pred cCCceeeEEeecCCCceEEEEec---CCCeEEEEeccCcEEEEEec
Q psy3710 352 SSSWSFCKFQIPSDPPCICAFGA---DSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~~~~dg~v~~~~~~ 394 (424)
|.. .++..++|++ +.+.|++++.||.+.++-..
T Consensus 297 ---~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 297 ---WTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp ---EEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ---eEe-------cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 111 2345667888 88899999999999988654
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2e-30 Score=236.09 Aligned_cols=235 Identities=14% Similarity=0.175 Sum_probs=195.7
Q ss_pred EEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCC---------CceeEEEeeCCCCCeeEEEeecCCCC-eEEEe
Q psy3710 94 ICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQC---------PQQLHVFETNPNPKGLCVLCPNSNNS-LLAFP 159 (424)
Q Consensus 94 ~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 159 (424)
..+.|.+.|.+++|+|+ +.++++ +|.|++|++... ...+..+..|... +.+++|+|++. +|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~l~s- 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKE--GYGLSWNPNLNGYLLS- 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSC--CCCEEECTTSTTEEEE-
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCC--eEEEEeCCCCCCeEEE-
Confidence 34558999999999997 556665 899999999631 4666777777654 78899999988 7776
Q ss_pred eccCCeEEEEeCCCCCC------CCcccccccCCeEEEEEcc-CCCEEEEEecCCcEEEEEECCCc---ceeeEEec---
Q psy3710 160 GRKSGHVHLVDLADPER------PPLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTGSG---QKLNELRR--- 226 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~~~---~~~~~~~~--- 226 (424)
|+.||.|++||+..... ....+.+|...|.+++|+| ++.+|++++.|+. |++||++++ +.+..+..
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQK-LMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCSCSSSCSEEEECCSS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCe-EEEEECCCCCCCcceeEeecCCC
Confidence 99999999999987422 1445668999999999999 6789999999999 999999987 45556643
Q ss_pred ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEECCCC---
Q psy3710 227 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATASYKGTLIRVFDTGSG--- 302 (424)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~~i~iwd~~~~--- 302 (424)
.+..++++|++..++++|+.||.|++||+++...+...+..|...|.+++|+|+++ +|++++.|+. |++||+...
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~~~~~~ 357 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEE 357 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGGGTTCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCCCCccc
Confidence 37889999999988888999999999999987777888889999999999999985 6999999999 999999862
Q ss_pred -----------ceee------------eeccCCc-EEEEEeCCCcEEEEEccccc
Q psy3710 303 -----------QKLN------------ELRRDSS-YLCVSSDHGTVHVFSVDEAQ 333 (424)
Q Consensus 303 -----------~~~~------------~~~~~~~-~l~~~~~d~~i~iw~~~~~~ 333 (424)
+.+. .|+|+++ ++++++.||.|+||++....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 2322 2567888 89999999999999998743
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.7e-31 Score=232.33 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=176.9
Q ss_pred EEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee
Q psy3710 84 IWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 84 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (424)
+|++.+.+.+.... |...|.+++|+||+.++++ +..+++|++. ..+.......+ . +..+.+.++++.++++|
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~-~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVH-PVAHIMSQEMR--H--LSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSEEEEEEET-TEEEEEEEECS--C--CCEEEECTTSSEEEEEC
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecC-CcceeeeeecC--C--eEEEEEcCCCCEEEEEE
Confidence 45666677766666 8999999999999988876 5678999986 44444333322 2 44556677788886668
Q ss_pred ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCc-ceeeEEecceeeeeecCCCCe
Q psy3710 161 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG-QKLNELRRGLCVLCPNSNNSL 239 (424)
Q Consensus 161 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (424)
+.|+.|++||+.++ +.+..+. |..+|.+++|+++. ++++ .++. |++||+.++ +.+..+.......++++ ..
T Consensus 78 ~~d~~v~iWd~~~~-~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~-i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~ 149 (355)
T 3vu4_A 78 GVKEVVHIWDDVKK-QDVSRIK-VDAPVKDLFLSREF--IVVS-YGDV-ISVFKFGNPWKRITDDIRFGGVCEFSN--GL 149 (355)
T ss_dssp SSTTEEEEEETTTT-EEEEEEE-CSSCEEEEEECSSE--EEEE-ETTE-EEEEESSTTCCBSSCCEEEEEEEEEET--TE
T ss_pred CCccEEEEEECCCC-cEEEEEE-CCCceEEEEEcCCE--EEEE-EcCE-EEEEECCCCceeeEEeccCCceEEEEc--cE
Confidence 88999999999986 5555554 67799999999864 4443 4778 999999988 76666655555566666 66
Q ss_pred EEEE-eecCCeEEEEeCCCCC--------------CC-CeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 240 LAFP-GRKSGHVHLVDLADPE--------------RP-PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 240 ~~~~-~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
++++ |+.+|.|++||+.++. .+ ...+.+|..+|++++|+|+|++|++++.|++.|++||+++++
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 6666 7899999999999754 12 567889999999999999999999888888327777777665
Q ss_pred eeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEe
Q psy3710 304 KLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVIC 383 (424)
Q Consensus 304 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 383 (424)
++.++... .|.+.+..++|+|++++|++++
T Consensus 230 ~~~~~~~g--------------------------------------------------~h~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 230 LVREFRRG--------------------------------------------------LDRADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp EEEEEECT--------------------------------------------------TCCSCEEEEEECTTSCEEEEEE
T ss_pred EEEEEEcC--------------------------------------------------CCCCcEEEEEECCCCCEEEEEE
Confidence 54433200 0335678899999999999999
Q ss_pred ccCcEEEEEecC
Q psy3710 384 ADGSYYKFMFNS 395 (424)
Q Consensus 384 ~dg~v~~~~~~~ 395 (424)
.||+|++|++..
T Consensus 260 ~d~~v~iw~~~~ 271 (355)
T 3vu4_A 260 DKWTLHVFEIFN 271 (355)
T ss_dssp TTCEEEEEESSC
T ss_pred CCCEEEEEEccC
Confidence 999999999974
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=5.7e-30 Score=238.08 Aligned_cols=312 Identities=11% Similarity=0.086 Sum_probs=245.6
Q ss_pred EECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEEC--CCCcEE
Q psy3710 17 GFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD--LKKQVV 93 (424)
Q Consensus 17 ~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~--~~~~~~ 93 (424)
+|+|++.++++++.++ |.+||..+++.+.....+.. +..+.++|+++++++++ .|++|.+||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~-------~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIG-------RDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEEC-------CCCeEEEEECcCCCCcEE
Confidence 4899998888888877 99999999888665553223 77899999999999998 5799999999 899999
Q ss_pred EEEeecCCeEEEEecC----CceEEEe----eccEEEEeecCCCceeEEEeeCC---------CCCeeEEEeecCCCCeE
Q psy3710 94 ICLEFNAPVKGVRLRR----DKIVVVL----EGLIKVYTFIQCPQQLHVFETNP---------NPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 94 ~~~~~~~~v~~~~~~~----~~~~~~~----~~~i~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l 156 (424)
.++.+...+..++|+| ++.++++ +++|.+||.. +.+.+..+..+. ....+..+.++|++..+
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~-t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE-TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT-TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc-ccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 9988877899999999 9876654 6899999986 778877776531 11246788999988887
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcceeeEEecc----e-ee
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQKLNELRRG----L-CV 230 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~~~~~~~~----~-~~ 230 (424)
+++...++.|.+||+.+..........+...+.+++|+|+|+++++++ .+++ |.+||..+++++..++.+ . ..
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCCCC
Confidence 776889999999999875322212224567788999999999877655 5778 999999999998888742 1 12
Q ss_pred ee-ecCCCCeEEEEee-cCCeEEEEeCCCC------CCCCeeeccCCCCeEEEEEcCCCCEEEEEe-------CCCcEEE
Q psy3710 231 LC-PNSNNSLLAFPGR-KSGHVHLVDLADP------ERPPLDIAAHEAPLSCIALNQTGTRLATAS-------YKGTLIR 295 (424)
Q Consensus 231 ~~-~~~~~~~~~~~~~-~dg~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~~i~ 295 (424)
.. ++|++..+++++. .+++|.+||+.+. -+.+..+..|...+..++++|++++|++++ .+++ |.
T Consensus 374 ~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~-v~ 452 (543)
T 1nir_A 374 ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS-VA 452 (543)
T ss_dssp EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC-EE
T ss_pred cccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce-EE
Confidence 22 4677677777665 6899999999873 234567778888899999999999999987 2667 99
Q ss_pred EEECCCCcee-e--------------------eeccCCcEEEEEe-----CCCcEEEEEccccccccccc
Q psy3710 296 VFDTGSGQKL-N--------------------ELRRDSSYLCVSS-----DHGTVHVFSVDEAQKINKQS 339 (424)
Q Consensus 296 iwd~~~~~~~-~--------------------~~~~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~ 339 (424)
+||+.+++.. . +|+|+|+.++++. .|+.|.|||.++++++..+.
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 9999987655 2 2578999988763 47999999999998765544
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=235.55 Aligned_cols=259 Identities=13% Similarity=0.114 Sum_probs=197.5
Q ss_pred EECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC-------
Q psy3710 17 GFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL------- 88 (424)
Q Consensus 17 ~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~------- 88 (424)
.+.+++.+|++|+.++ |++||+.+++.+.... .+.+..+.+.|+ +++++ .|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s-------~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRG-------PCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEEC-------STTEEEEEETTTEEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEec-------CCCeEEEEEccCceEEee
Confidence 4456788999999999 9999999887754443 456667777777 55555 58999999654
Q ss_pred --CCcEEEEEe--ecCCeEEEEecC--CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 89 --KKQVVICLE--FNAPVKGVRLRR--DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 89 --~~~~~~~~~--~~~~v~~~~~~~--~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
+++.+..+. |..+|.+++|+| ++.++++ |+.|++||++ .++.......+. ...+.+++|+|++.++++
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~~~~-~~~i~~~~~~pdg~~las- 187 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVHSAKS-DVEYSSGVLHKDSLLLAL- 187 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEECCCS-SCCCCEEEECTTSCEEEE-
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEEecCC-CCceEEEEECCCCCEEEE-
Confidence 566566555 557899999999 8877775 8999999997 666655443332 234788999999999998
Q ss_pred eccCCeEEEEeCCCCCCCCccccc-ccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec------ce--ee
Q psy3710 160 GRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR------GL--CV 230 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~------~~--~~ 230 (424)
|+.||.|++||++++......+.. |.++|.+++|+|++.+|++++ ++. |++||+++++....+.. ++ ..
T Consensus 188 g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT-VVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB-EEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe-EEEEEcCCCCcceeecccccccccccceE
Confidence 999999999999987433367777 999999999999999999999 458 99999999877654432 12 35
Q ss_pred eeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEEE
Q psy3710 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ---TGTRLATASYKGTLIRVFD 298 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~~i~iwd 298 (424)
++++|++..++++++.++.+++|++......... .++..++|.| +.+.+++++.|+. ++++-
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~-~~~~~ 330 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGDGG-IAAIL 330 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEETTE-EEEEE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecCCc-eEEEE
Confidence 8999999988874444999999999765532221 5677888988 8889999999998 76654
No 125
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=1.2e-29 Score=255.38 Aligned_cols=373 Identities=11% Similarity=0.065 Sum_probs=265.7
Q ss_pred cccccCCceEEEEECCCCCeeEeecCC------e-EEEEeCCcCcccccccccCCCe-------eeEEEeccCceEEEEe
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACGMED------G-FRIYNCDPLKEKERQDFTDGGL-------GHVEMLFRCNYLALVG 70 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g~~~------~-i~iw~~~~~~~~~~~~~~~~~i-------~~~~~~~~~~~l~~~~ 70 (424)
.+.+|...|.+++|||||++||+++.+ . |++|++.+++. .....|...+ ..++|+|+++ +++++
T Consensus 47 ~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~-~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~ 124 (1045)
T 1k32_A 47 KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI-KRITYFSGKSTGRRMFTDVAGFDPDGN-LIIST 124 (1045)
T ss_dssp EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE-EECCCCCEEEETTEECSEEEEECTTCC-EEEEE
T ss_pred EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe-EEcccCCCcccccccccccccCCCCCE-EEEEE
Confidence 477899999999999999999976432 2 99999987764 3345556666 8899999999 44444
Q ss_pred CCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEee---------------ccEEEEeecCCCceeEEE
Q psy3710 71 GGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLE---------------GLIKVYTFIQCPQQLHVF 135 (424)
Q Consensus 71 ~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---------------~~i~v~~~~~~~~~~~~~ 135 (424)
....+......|.+|++.+++...... .....++|+| + +++.. ....+|..... .....+
T Consensus 125 ~~~~~~~~~~~l~~~~~~~g~~~~l~~--~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~-~~~~~l 199 (1045)
T 1k32_A 125 DAMQPFSSMTCLYRVENDGINFVPLNL--GPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-GAFKKI 199 (1045)
T ss_dssp CTTSSSTTCCEEEEEEGGGTEEEECCS--CSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEET-TEEEEE
T ss_pred CCcCCCcccceEEEEECCCCCeEEecC--CCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCC-CCeEEC
Confidence 321111113578888987776543222 2345677999 7 55541 24667765423 444555
Q ss_pred eeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEEC
Q psy3710 136 ETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDT 215 (424)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~ 215 (424)
..|. ..+..+.|+++ ..+++ ++.++.+.+|.+.........+..|. .+...+|+|+|+.|+++ .++. |++||+
T Consensus 200 ~~~~--~~v~~~~~s~d-~l~~~-~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~-i~~~d~ 272 (1045)
T 1k32_A 200 VDMS--THVSSPVIVGH-RIYFI-TDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGS-IYIFNP 272 (1045)
T ss_dssp ECCS--SCCEEEEEETT-EEEEE-ECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTE-EEEECT
T ss_pred cCCC--CcccceEEeCC-EEEEE-EeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCE-EEEecC
Confidence 5555 44677888887 44444 78889999998764324455555554 46778999999999887 4788 999999
Q ss_pred CCcceeeEEec--------------ceeeeeec-CCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCC-CeEEEEEcC
Q psy3710 216 GSGQKLNELRR--------------GLCVLCPN-SNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEA-PLSCIALNQ 279 (424)
Q Consensus 216 ~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~ 279 (424)
...+ +..+.. .+..++++ |++..++++. ++.|++|++..+. ...+..|.. .+..++|+
T Consensus 273 ~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 273 DTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-
T ss_pred CceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-
Confidence 5443 334443 36778999 9999888754 8899999998654 233456777 89999999
Q ss_pred CCCEEEEEeCCCcEEE-EEECCCCcee-----------eeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeecc
Q psy3710 280 TGTRLATASYKGTLIR-VFDTGSGQKL-----------NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFL 347 (424)
Q Consensus 280 ~~~~l~~~~~d~~~i~-iwd~~~~~~~-----------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (424)
||+.|++++.+.. +. +|++.+++.. ..|+|+|++|++++.++.|++||+.+++....
T Consensus 347 dg~~l~~~s~~~~-l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~---------- 415 (1045)
T 1k32_A 347 TKVAFIHGTREGD-FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI---------- 415 (1045)
T ss_dssp SEEEEEEEETTEE-EEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE----------
T ss_pred CCCeEEEEECCCc-eEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe----------
Confidence 9999999998777 88 9998876432 24789999999999999999999998764321
Q ss_pred CccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccC----------cEEEEEecCCcceeee----eehhhheecCC
Q psy3710 348 PKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADG----------SYYKFMFNSKGECWRD----VYIQFLEMTND 413 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg----------~v~~~~~~~~~~~~~~----~~~~~~~~~~d 413 (424)
...+.+.+..++|||||++|++++.++ .|++|++. +++.... .....+.|+||
T Consensus 416 ------------~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~~~~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 416 ------------ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRKIFAATTENSHDYAPAFDAD 482 (1045)
T ss_dssp ------------EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTEEEECSCSSSBEEEEEECTT
T ss_pred ------------ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCcEEEeeCCCcccCCceEcCC
Confidence 123445677899999999999887754 99999987 4443221 11234679999
Q ss_pred CceeeEEE
Q psy3710 414 SNLLSCIE 421 (424)
Q Consensus 414 ~~~l~~~~ 421 (424)
|++|+...
T Consensus 483 G~~l~~~s 490 (1045)
T 1k32_A 483 SKNLYYLS 490 (1045)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEe
Confidence 99887653
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=4e-30 Score=230.98 Aligned_cols=274 Identities=13% Similarity=0.116 Sum_probs=188.7
Q ss_pred ceEEEEE---CCCC-CeeEeecCCeEEEEeCCcCccccc---------ccccCCCeeeEE--------------------
Q psy3710 12 GLLYAGF---NQDQ-GCFACGMEDGFRIYNCDPLKEKER---------QDFTDGGLGHVE-------------------- 58 (424)
Q Consensus 12 ~V~~~~~---s~~g-~~la~g~~~~i~iw~~~~~~~~~~---------~~~~~~~i~~~~-------------------- 58 (424)
...++.| +|++ .++++|.+++|++|+......... ...+...+..+.
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNS 96 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceee
Confidence 3455666 4443 567778877799997533221000 001122333333
Q ss_pred EeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEE-----Ee-ecCCeEEEEecC--------CceEEEe---eccEE
Q psy3710 59 MLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVIC-----LE-FNAPVKGVRLRR--------DKIVVVL---EGLIK 121 (424)
Q Consensus 59 ~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~-----~~-~~~~v~~~~~~~--------~~~~~~~---~~~i~ 121 (424)
+.+++..+++++ .|++|+|||.++++.... +. |.+.|.+++|+| |+.++++ |++|+
T Consensus 97 ~~~~~~~las~~-------~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 97 SPVYSLFLACVC-------QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp CCEEEEEEEEEE-------TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred cCCCCCEEEEEe-------CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 334455677776 589999999988876542 22 789999999997 7788886 89999
Q ss_pred EEeecCCCceeEEEeeCCCCCeeEEEeecCCCC-eEEEeeccCCeEEEEeCCCCCCCCc---------------------
Q psy3710 122 VYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNS-LLAFPGRKSGHVHLVDLADPERPPL--------------------- 179 (424)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~dg~i~i~d~~~~~~~~~--------------------- 179 (424)
+||+. ....+..+..+..+ +.+++|+|++. +|++ |+.||.|++||+.++.....
T Consensus 170 ~Wd~~-~~~~~~~~~~~~~~--v~~v~~~p~~~~~l~~-~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 170 IWRLT-DEGPILAGYPLSSP--GISVQFRPSNPNQLIV-GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEE-TTEEEEEEEECSSC--EEEEEEETTEEEEEEE-EETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred EEECC-CCceeeeecCCCCC--cEEEEECCCCCceEEe-cCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 99997 55566666666644 78899999986 4555 99999999999987532111
Q ss_pred ---ccccccCCeEEEEEc-cCCCEEEEEecCCcEEEEEECCCcceeeEEecc----------------------eeeeee
Q psy3710 180 ---DIAAHEAPLSCIALN-QTGTRLATASYKGTLIRVFDTGSGQKLNELRRG----------------------LCVLCP 233 (424)
Q Consensus 180 ---~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~----------------------~~~~~~ 233 (424)
...+|...+.++.|+ |+++.+++++.|+. +++||+..++....+..+ ......
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 123677889999987 79999999999999 999999887655444321 112223
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
.+.+..++++|+.||.|++||+.+++. ......|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~-~~~~~~~~~~V~svafspdG~~LA~as~~G--v~lvrL~ 388 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDS-NSIPIQLGMPIVDFCWHQDGSHLAIATEGS--VLLTRLM 388 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTC-CEEEEECSSCEEEEEECTTSSEEEEEESSE--EEEEEEG
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcE-EEEecCCCCcEEEEEEcCCCCEEEEEeCCC--eEEEEEe
Confidence 345667788899999999999998775 444557889999999999999999999877 6777653
No 127
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.4e-30 Score=248.21 Aligned_cols=238 Identities=15% Similarity=0.211 Sum_probs=192.9
Q ss_pred ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC--CCcEEEEEe-ecCCeEEEEecCC--ceEEEe---ec
Q psy3710 47 QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL--KKQVVICLE-FNAPVKGVRLRRD--KIVVVL---EG 118 (424)
Q Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~~~~---~~ 118 (424)
...|.+.|.+++|+|+++++++++ .|+.|++||+. +++.+..+. |.++|.+++|+|+ +..+++ ||
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~-------~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCS-------SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEE-------TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred cccCcceeEEEEECCCCCeEEEEE-------CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence 556899999999999999999988 58999999987 456666666 8899999999987 766654 89
Q ss_pred cEEEEeecCCCc--eeEEEeeCCCCCeeEEEeecCC--CCeEEEeeccCCeEEEEeCCCCC-CCCcccccccCCeEEEEE
Q psy3710 119 LIKVYTFIQCPQ--QLHVFETNPNPKGLCVLCPNSN--NSLLAFPGRKSGHVHLVDLADPE-RPPLDIAAHEAPLSCIAL 193 (424)
Q Consensus 119 ~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~ 193 (424)
.|++||+. .++ ....+..|. ..+.+++|+|+ +..+++ |+.||.|++||+.... .....+.+|...|.+++|
T Consensus 78 ~I~vwd~~-~~~~~~~~~~~~h~--~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~ 153 (753)
T 3jro_A 78 KVLIWKEE-NGRWSQIAVHAVHS--ASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 153 (753)
T ss_dssp CEEEEEEE-TTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEE-EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE
T ss_pred eEEEEECC-CCcccccccccCCC--CCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEe
Confidence 99999997 554 445555555 45889999999 899998 9999999999998752 234466789999999999
Q ss_pred cc-------------CCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC
Q psy3710 194 NQ-------------TGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER 260 (424)
Q Consensus 194 ~~-------------~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 260 (424)
+| ++..+++++.||. |++||++++......
T Consensus 154 ~p~~~~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~------------------------------------ 196 (753)
T 3jro_A 154 APATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVL------------------------------------ 196 (753)
T ss_dssp CCCC---------CGGGCCEEEEETTSC-EEEEEEETTTTEEEE------------------------------------
T ss_pred cCcccccccccccCCCCCEEEEEECCCe-EEEEeccCCccccee------------------------------------
Confidence 99 5888999999998 999998765332111
Q ss_pred CCeeeccCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEECCCCce-----e------------eeeccCCcEEEEEeC
Q psy3710 261 PPLDIAAHEAPLSCIALNQT---GTRLATASYKGTLIRVFDTGSGQK-----L------------NELRRDSSYLCVSSD 320 (424)
Q Consensus 261 ~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~~i~iwd~~~~~~-----~------------~~~~~~~~~l~~~~~ 320 (424)
...+.+|..+|++++|+|+ +++|++++.||. |++||+.+++. + ..|+|+++++++++.
T Consensus 197 -~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 197 -ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp -EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred -eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 1233479999999999999 899999999999 99999988631 1 146799999999999
Q ss_pred CCcEEEEEcccccc
Q psy3710 321 HGTVHVFSVDEAQK 334 (424)
Q Consensus 321 d~~i~iw~~~~~~~ 334 (424)
||.|++|++..+..
T Consensus 275 Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 275 DNKVTLWKENLEGK 288 (753)
T ss_dssp SSCEECCBCCSSSC
T ss_pred CCEEEEEecCCCCC
Confidence 99999999987543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=4.4e-28 Score=225.39 Aligned_cols=328 Identities=11% Similarity=0.080 Sum_probs=236.7
Q ss_pred EeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---eccEEEEee--cCCCceeE
Q psy3710 59 MLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTF--IQCPQQLH 133 (424)
Q Consensus 59 ~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~--~~~~~~~~ 133 (424)
++|++..+++.+ .|++|.+||..+++.+.++.....+..++|+|++.++++ ++.|.+||+ . +.+.+.
T Consensus 145 ~~p~~~~~vs~~-------~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-t~~~~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLR-------DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK-EPTKVA 216 (543)
T ss_dssp CCGGGEEEEEEG-------GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS-SCEEEE
T ss_pred cCCCCEEEEEEc-------CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCC-CCcEEE
Confidence 677775555444 479999999999999999985445999999999977765 789999999 5 567777
Q ss_pred EEeeCCCCCeeEEEeecC----CCCeEEEeeccCCeEEEEeCCCCCCCCccccc----------ccC-CeEEEEEccCCC
Q psy3710 134 VFETNPNPKGLCVLCPNS----NNSLLAFPGRKSGHVHLVDLADPERPPLDIAA----------HEA-PLSCIALNQTGT 198 (424)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~ 198 (424)
.+... .....++++| ++++++++...++.|.+||..+. +++..+.. |.. .+..+.++|++.
T Consensus 217 ~i~~g---~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~-~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~ 292 (543)
T 1nir_A 217 EIKIG---IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL-EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 292 (543)
T ss_dssp EEECC---SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTC-CEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred EEecC---CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccc-ccceeecccCcccCccccccCCceEEEEECCCCC
Confidence 77643 3467889999 99999984446899999999886 55555443 323 789999999776
Q ss_pred E-EEEEecCCcEEEEEECCCcceee--EEec--ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec----cCC
Q psy3710 199 R-LATASYKGTLIRVFDTGSGQKLN--ELRR--GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA----AHE 269 (424)
Q Consensus 199 ~-l~~~~~d~~~i~iwd~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~----~~~ 269 (424)
. +++...++. |.+||+.+.+.+. .+.. ....+.++|+++++++++..+++|.+||..+++. ...+. .|.
T Consensus 293 ~~~vs~~~~g~-i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l-~~~i~~g~~ph~ 370 (543)
T 1nir_A 293 EFIVNVKETGK-VLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL-SALVDVGKTPHP 370 (543)
T ss_dssp EEEEEETTTTE-EEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE-EEEEECSSSBCC
T ss_pred EEEEEECCCCe-EEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE-EEeeccCCCCCC
Confidence 5 556667788 9999998876544 3332 2566899999999998888899999999998763 33333 255
Q ss_pred CCeEEEEEcCC-CCEEEEEe-CCCcEEEEEECCC-------Cceeee------------eccCCcEEEEEe-------CC
Q psy3710 270 APLSCIALNQT-GTRLATAS-YKGTLIRVFDTGS-------GQKLNE------------LRRDSSYLCVSS-------DH 321 (424)
Q Consensus 270 ~~v~~~~~~~~-~~~l~~~~-~d~~~i~iwd~~~-------~~~~~~------------~~~~~~~l~~~~-------~d 321 (424)
+....+ ++|+ +..++++. .|++ |.+||+.+ ++++++ ++|++++|++++ .+
T Consensus 371 g~g~~~-~~p~~g~~~~s~~~~d~~-V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 371 GRGANF-VHPKYGPVWSTSHLGDGS-ISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred CCCccc-CCCCCccEEEeccCCCce-EEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccC
Confidence 444333 4676 66677765 5788 99999988 676665 468999999987 27
Q ss_pred CcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEe-----ccCcEEEEEecCC
Q psy3710 322 GTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVIC-----ADGSYYKFMFNSK 396 (424)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-----~dg~v~~~~~~~~ 396 (424)
++|.+||+.+++...+.-.+....- ...+...+..+.|+|+|++|+++. .|+.|.+||.. +
T Consensus 449 ~~v~v~d~~~~~~~~~~~~v~~~~~-------------~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~-t 514 (543)
T 1nir_A 449 QSVAVFDLKNLDAKYQVLPIAEWAD-------------LGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK-T 514 (543)
T ss_dssp TCEEEEETTCTTSCCEEECHHHHHC-------------CCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT-T
T ss_pred ceEEEEECCCCCCCeEEeechhhcc-------------cCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC-C
Confidence 7999999999875421100000000 001223467889999999998762 47999999976 7
Q ss_pred cceeeeeehhhheecCCCcee
Q psy3710 397 GECWRDVYIQFLEMTNDSNLL 417 (424)
Q Consensus 397 ~~~~~~~~~~~~~~~~d~~~l 417 (424)
+++.+...... -.+|+|+|-
T Consensus 515 ~~~~~~i~~~~-~~~p~g~~~ 534 (543)
T 1nir_A 515 LKLKAVVKDPR-LITPTGKFN 534 (543)
T ss_dssp TEEEEEECCTT-CCSEEEEEE
T ss_pred ceEEEeecCCC-ccCCCeeee
Confidence 77765443221 256788763
No 129
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=3e-28 Score=245.15 Aligned_cols=397 Identities=11% Similarity=0.034 Sum_probs=265.9
Q ss_pred cccccCCce-------EEEEECCCCCeeEeecCC----e---EEEEeCCcCcccccc-----------------------
Q psy3710 5 TSSTYKNGL-------LYAGFNQDQGCFACGMED----G---FRIYNCDPLKEKERQ----------------------- 47 (424)
Q Consensus 5 ~l~~h~~~V-------~~~~~s~~g~~la~g~~~----~---i~iw~~~~~~~~~~~----------------------- 47 (424)
.+.+|...+ ..++|||||+++++++.+ + |.+|++.+++.....
T Consensus 94 ~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~ 173 (1045)
T 1k32_A 94 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFEL 173 (1045)
T ss_dssp ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCC
T ss_pred EcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCc
Confidence 477888888 999999999977776643 2 788887665432111
Q ss_pred --------------------------cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEEEEEeecC
Q psy3710 48 --------------------------DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVICLEFNA 100 (424)
Q Consensus 48 --------------------------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~~~~ 100 (424)
..|.+.+..+.|+++ .+++++. .|+++.||.+.. +.....+....
T Consensus 174 ~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~------~dg~~~l~~~~~~g~~~~~l~~~~ 245 (1045)
T 1k32_A 174 PHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITD------IDGFGQIYSTDLDGKDLRKHTSFT 245 (1045)
T ss_dssp TTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEEC------TTSSCEEEEEETTSCSCEECCCCC
T ss_pred cccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEe------ccCceEEEEEeCCCCcceEecCCC
Confidence 112344455555554 4444443 367778887542 33344444334
Q ss_pred CeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCC---------CCCeeEEEeec-CCCCeEEEeeccCCeEEE
Q psy3710 101 PVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNP---------NPKGLCVLCPN-SNNSLLAFPGRKSGHVHL 168 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~l~~~~~~dg~i~i 168 (424)
.+...+|+||+..++. ++.|.+|++. .. .+..+..+. ....+..++|+ |+|+.|++ ++ ++.|.+
T Consensus 246 ~~~~~~~SpDG~~la~~~~~~i~~~d~~-~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~-~~-~~~i~~ 321 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSKGGSIYIFNPD-TE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAF-VS-RGQAFI 321 (1045)
T ss_dssp SSCEEEEEESSSCEEEEETTEEEEECTT-TC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEE-EE-TTEEEE
T ss_pred CcceeeEcCCCCEEEEEeCCEEEEecCC-ce-EeeeeccCcccccccccccccccceeeecCCCCCEEEE-EE-cCEEEE
Confidence 5677899999976665 8899999983 33 333443321 01136678999 99999998 54 889999
Q ss_pred EeCCCCCCCCcccccccC-CeEEEEEccCCCEEEEEecCCcEEE-EEECCCcceeeEEe--cceeeeeecCCCCeEEEEe
Q psy3710 169 VDLADPERPPLDIAAHEA-PLSCIALNQTGTRLATASYKGTLIR-VFDTGSGQKLNELR--RGLCVLCPNSNNSLLAFPG 244 (424)
Q Consensus 169 ~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~~i~-iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 244 (424)
|++..+ ....+..|.. .+..++|+ +|+.|++++.+.. +. +||+.+++...... ..+..++++|++..+++ +
T Consensus 322 ~~~~~~--~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~-l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~-~ 396 (1045)
T 1k32_A 322 QDVSGT--YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGD-FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVV-A 396 (1045)
T ss_dssp ECTTSS--BEEECSCCSCEEEEEECSS-SEEEEEEEETTEE-EEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEE-E
T ss_pred EcCCCC--ceEEccCCCcceEEeeeEc-CCCeEEEEECCCc-eEEEEECCCCCceEecCCccceeeeEECCCCCEEEE-E
Confidence 999864 3344566777 89999999 9999999988777 88 99998775433221 23677899999998887 7
Q ss_pred ecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCC----------cEEEEEECCCCceee--------
Q psy3710 245 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG----------TLIRVFDTGSGQKLN-------- 306 (424)
Q Consensus 245 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~~i~iwd~~~~~~~~-------- 306 (424)
+.++.|++||+.+++. ......|...+.+++|+|||++|++++.++ . |++||+.+++...
T Consensus 397 ~~~~~v~~~d~~tg~~-~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~-i~l~d~~~g~~~~l~~~~~~~ 474 (1045)
T 1k32_A 397 NDRFEIMTVDLETGKP-TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA-IHVYDMEGRKIFAATTENSHD 474 (1045)
T ss_dssp ETTSEEEEEETTTCCE-EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE-EEEEETTTTEEEECSCSSSBE
T ss_pred CCCCeEEEEECCCCce-EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCe-EEEEECCCCcEEEeeCCCccc
Confidence 7889999999988763 344457889999999999999999987754 6 9999999876322
Q ss_pred ---eeccCCcEEEEEeCCCcEEEEEcccccccccccc-ceeee----------ccCccc---------cC-CceeeEEee
Q psy3710 307 ---ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSS-LASAS----------FLPKYF---------SS-SWSFCKFQI 362 (424)
Q Consensus 307 ---~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~----------~~~~~~---------~~-~~~~~~~~~ 362 (424)
.|+|+|++|++++.++...+|+............ ..... +.+... .+ .-....+..
T Consensus 475 ~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~ 554 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV 554 (1045)
T ss_dssp EEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSC
T ss_pred CCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCC
Confidence 3789999999999988888898764332111000 00000 111000 00 001122334
Q ss_pred cCCCceEEEEecCCCeEEE-----------Ee--ccCcEEEEEecCCcceee-eeehhhheecCCCceeeEEE
Q psy3710 363 PSDPPCICAFGADSNSIIV-----------IC--ADGSYYKFMFNSKGECWR-DVYIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 363 ~~~~~~~~~~s~~~~~l~~-----------~~--~dg~v~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~~~~ 421 (424)
+.+.+..++++||++++++ .+ ....|++||+. +++... ......+.++|||+.|+.+.
T Consensus 555 ~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~v~~~~~S~DG~~l~~~~ 626 (1045)
T 1k32_A 555 DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK-TRKVTEVKNNLTDLRLSADRKTVMVRK 626 (1045)
T ss_dssp CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETT-TCCEEEEEEEEEEEEECTTSCEEEEEE
T ss_pred CCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECC-CCcEEEeecCcceEEECCCCCEEEEEc
Confidence 5567889999999987775 11 24467777765 333322 23345678999999988763
No 130
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.6e-28 Score=206.46 Aligned_cols=247 Identities=13% Similarity=0.012 Sum_probs=173.3
Q ss_pred ccccccCCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEecc----CceEEEEeCCcCCCcCC
Q psy3710 4 GTSSTYKNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFR----CNYLALVGGGTHPKYPN 79 (424)
Q Consensus 4 ~~l~~h~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~~~~~~~~d 79 (424)
.+..+|+.+|..++|.||-.-|++-.-+ ..+...|..++++|+ +..++..+
T Consensus 80 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------------~~~~~~v~sla~spd~~~~~~~l~s~g--------- 134 (356)
T 2w18_A 80 YTWHFAEVPVLQIVPVPDVYNLVCVALG----------------NLEIREIRALFCSSDDESEKQVLLKSG--------- 134 (356)
T ss_dssp EEEECCSSCEEEECCCTTCCSCEEEEEC----------------SSSEEEEEEECC------CCEEEEEEE---------
T ss_pred EEEeccCceeEEEEEcCcccceeeeeec----------------cccccceEEEEECCCccccccEEEeCC---------
Confidence 4567888888888888886544432211 112445778899999 77787755
Q ss_pred CeEEEEECCCCcEEEEEe--ecCCeEEEEecCCceEEEeeccEEEEeecCCCceeEEEeeCCCCCeeEEEee-cCCCCeE
Q psy3710 80 NRVMIWDDLKKQVVICLE--FNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCP-NSNNSLL 156 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 156 (424)
+.+++|++.+++.+.... | |+.|++|++.++++.+..+..|.....+.++++ .-++..|
T Consensus 135 ~~~~v~~l~~g~lv~ss~~g~------------------d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 135 NIKAVLGLTKRRLVSSSGTLS------------------DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp EEEEEEEETTTEEEEEESSST------------------TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred CeEEEEecCCCcEEEecccCC------------------CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 568888775555443321 1 667888888656777777788887766655555 2267788
Q ss_pred EEeeccCCeEEEEeCCCCCCCCccccccc---CCeEEEEEccCCCEE------------EEEecCCcEEEEEECCCccee
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAHE---APLSCIALNQTGTRL------------ATASYKGTLIRVFDTGSGQKL 221 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~~i~iwd~~~~~~~ 221 (424)
++ |+.|++|++||++++ +.+..+.+|. ..+.+++|+|+|.++ ++|+.|++ |++||..+++.+
T Consensus 197 aS-gS~D~TIkIWDl~TG-k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~l 273 (356)
T 2w18_A 197 LG-TTIMNNIVIWNLKTG-QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLSV 273 (356)
T ss_dssp EE-EETTSEEEEEETTTC-CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEEE
T ss_pred EE-ecCCCcEEEEECCCC-cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEEE
Confidence 87 999999999999997 7777787654 467788999999876 56778899 999999999887
Q ss_pred eEEe-----cce-eeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeE-EEEEcCCCCEEEEEeCCCcEE
Q psy3710 222 NELR-----RGL-CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLS-CIALNQTGTRLATASYKGTLI 294 (424)
Q Consensus 222 ~~~~-----~~~-~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~~i 294 (424)
..+. ++. ..+..+.. ..++++|+.|++|+|||+.+++ ...++.+|...+. .++|+|||++|++|+.|++ |
T Consensus 274 ~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk-~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T-I 350 (356)
T 2w18_A 274 GVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQ-CTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN-I 350 (356)
T ss_dssp EEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCS-EEEEECCC--CCCCEEEECSSSSEEEEECTTSC-E
T ss_pred EEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCc-EEEEecCCCCCeEEEEEECCCCCEEEEEECCCc-E
Confidence 6542 111 11111222 2356779999999999999877 4566778877655 6899999999999999999 9
Q ss_pred EEEEC
Q psy3710 295 RVFDT 299 (424)
Q Consensus 295 ~iwd~ 299 (424)
+|||+
T Consensus 351 klWd~ 355 (356)
T 2w18_A 351 FVYHY 355 (356)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99985
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.9e-27 Score=231.76 Aligned_cols=307 Identities=11% Similarity=0.077 Sum_probs=224.3
Q ss_pred CCceEEEEECCCCCeeEeecC-C------eEEEEeCCcCcccccccccC------------------------CCeeeEE
Q psy3710 10 KNGLLYAGFNQDQGCFACGME-D------GFRIYNCDPLKEKERQDFTD------------------------GGLGHVE 58 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~-~------~i~iw~~~~~~~~~~~~~~~------------------------~~i~~~~ 58 (424)
...|.+++|||||++|++++. + .|++||+++++.......+. ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999998765 3 39999999887644333322 2378899
Q ss_pred EeccCceEEEEeCCcCCCcCCCeEEEEECCCC---cEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeE
Q psy3710 59 MLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK---QVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLH 133 (424)
Q Consensus 59 ~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~ 133 (424)
|+|+++++++++ ++.|++||+.++ +......+...+..++|+||+..++. ++.|++||+. +++...
T Consensus 116 ~SpDg~~l~~~~--------~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~-~g~~~~ 186 (741)
T 2ecf_A 116 WSPDAQRLLFPL--------GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLA-SGRQMQ 186 (741)
T ss_dssp ECTTSSEEEEEE--------TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETT-TTEEEE
T ss_pred ECCCCCEEEEEe--------CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecC-CCCEEE
Confidence 999999999998 489999999888 54443346788999999999987775 7799999986 444433
Q ss_pred EEeeCCCCC--------------eeEEEeecCCCCeEEEeeccCC---------------------------------eE
Q psy3710 134 VFETNPNPK--------------GLCVLCPNSNNSLLAFPGRKSG---------------------------------HV 166 (424)
Q Consensus 134 ~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~dg---------------------------------~i 166 (424)
....+.... .+..+.|+|||+.|++ ++.|+ .|
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~-~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAY-ARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEE-EEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEE-EEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 322222100 1356899999999998 65554 78
Q ss_pred EEEeCCC-CCCCCcccc--cccCCeEEEEEccCCCEEEEEec-----CCcEEEEEECCCcceeeEEecc-------eeee
Q psy3710 167 HLVDLAD-PERPPLDIA--AHEAPLSCIALNQTGTRLATASY-----KGTLIRVFDTGSGQKLNELRRG-------LCVL 231 (424)
Q Consensus 167 ~i~d~~~-~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~~i~iwd~~~~~~~~~~~~~-------~~~~ 231 (424)
.+||+.+ + +...... .|...+..++| |||+.|++++. +.. |++||+.+++....+..+ ...+
T Consensus 266 ~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 266 GVISPAEQA-QTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEECSSTTC-CCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEECCCCC-ceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 8999987 6 3332222 47788999999 99999987764 456 999999998876665533 2468
Q ss_pred eecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEE-EEcCCCCEEEEE-eCCC--cEEEEEECCC-Ccee-
Q psy3710 232 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCI-ALNQTGTRLATA-SYKG--TLIRVFDTGS-GQKL- 305 (424)
Q Consensus 232 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~-~~d~--~~i~iwd~~~-~~~~- 305 (424)
+|+|+++ ++++++.+|.+++|.+..... ...+..|...+..+ .|+|+++.|+.. +.++ . ++||++.. +...
T Consensus 343 ~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~-~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 343 RFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARE-SQIYAVPLQGGQPQ 419 (741)
T ss_dssp EECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTC-BEEEEEETTCCCCE
T ss_pred EECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCce-EEEEEEEcCCCCee
Confidence 8999998 666688888777777653333 56666788888887 599999877654 4454 7 89998753 3322
Q ss_pred ----------eeeccCCcEEEEEeCC----CcEEEEEcccc
Q psy3710 306 ----------NELRRDSSYLCVSSDH----GTVHVFSVDEA 332 (424)
Q Consensus 306 ----------~~~~~~~~~l~~~~~d----~~i~iw~~~~~ 332 (424)
..|+|+|++|+....+ ..+.+|+...+
T Consensus 420 ~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 420 RLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp ECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred ecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 2478999988866543 46888987653
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4.2e-26 Score=205.97 Aligned_cols=285 Identities=14% Similarity=0.074 Sum_probs=206.2
Q ss_pred cCCceEEEEECCCCC-eeEeec----CC-----eEEEEeC--CcCccccc--ccccCCCeeeEEEec-------------
Q psy3710 9 YKNGLLYAGFNQDQG-CFACGM----ED-----GFRIYNC--DPLKEKER--QDFTDGGLGHVEMLF------------- 61 (424)
Q Consensus 9 h~~~V~~~~~s~~g~-~la~g~----~~-----~i~iw~~--~~~~~~~~--~~~~~~~i~~~~~~~------------- 61 (424)
+...+...+|++.|. ++++|+ .+ .+++||+ .+++.+.. ...|...+..+++.+
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 345778888988884 555664 23 3899999 88876522 444555565555543
Q ss_pred -cCceEEEEeCCcCCCcCC---CeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---e---ccEEEEeecCCCce
Q psy3710 62 -RCNYLALVGGGTHPKYPN---NRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---E---GLIKVYTFIQCPQQ 131 (424)
Q Consensus 62 -~~~~l~~~~~~~~~~~~d---~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~---~~i~v~~~~~~~~~ 131 (424)
.+..+++++... .+ ++|++||...+.......+...+.+++|+|++..+++ + ..|++||+. +++.
T Consensus 141 ~~~~~l~~~s~~~----~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~-tg~~ 215 (415)
T 2hqs_A 141 AFRTRIAYVVQTN----GGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA-NGAV 215 (415)
T ss_dssp CTTCEEEEEEECS----SSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCE
T ss_pred cCCCEEEEEEecC----CCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC-CCcE
Confidence 156677766431 12 7999999975554444448899999999999987775 3 389999996 5554
Q ss_pred eEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCe--EEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC-C-
Q psy3710 132 LHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGH--VHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK-G- 207 (424)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~- 207 (424)
. .+..+. ..+.+++|+|||+.|+++++.++. |++||+.++ ....+..|...+.+++|+|+|++|++++.+ +
T Consensus 216 ~-~l~~~~--~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 216 R-QVASFP--RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG--QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp E-EEECCS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--CEEECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred E-EeecCC--CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC--CEEeCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 3 444444 357889999999999864666554 999999875 346677888999999999999999988864 4
Q ss_pred -cEEEEEECCCcceeeEEe--cceeeeeecCCCCeEEEEeecC--CeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC
Q psy3710 208 -TLIRVFDTGSGQKLNELR--RGLCVLCPNSNNSLLAFPGRKS--GHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT 282 (424)
Q Consensus 208 -~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 282 (424)
. |++||+.+++...... .....++++|+++.+++++..+ ..|++||+.+++. ..+..+. .+.+++|+|||+
T Consensus 291 ~~-i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~ 366 (415)
T 2hqs_A 291 PQ-VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGT 366 (415)
T ss_dssp CE-EEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSS
T ss_pred cE-EEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCC
Confidence 5 8888998876433211 2256789999999999876653 5899999998663 3444554 899999999999
Q ss_pred EEEEEeCCC---cEEEEEECCCCceeeeec
Q psy3710 283 RLATASYKG---TLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 283 ~l~~~~~d~---~~i~iwd~~~~~~~~~~~ 309 (424)
+|++++.++ . |++||+. +.....+.
T Consensus 367 ~l~~~s~~~~~~~-l~~~d~~-g~~~~~l~ 394 (415)
T 2hqs_A 367 MVIYSSSQGMGSV-LNLVSTD-GRFKARLP 394 (415)
T ss_dssp EEEEEEEETTEEE-EEEEETT-SCCEEECC
T ss_pred EEEEEEcCCCccE-EEEEECC-CCcEEEee
Confidence 999988877 5 8888886 33344443
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1e-25 Score=203.46 Aligned_cols=289 Identities=16% Similarity=0.117 Sum_probs=208.4
Q ss_pred CCeeeEEEeccCceEEEEeCCcCCCcCCC----eEEEEEC--CCCcEEEE--Ee-ecCCeEEEEecC-------------
Q psy3710 52 GGLGHVEMLFRCNYLALVGGGTHPKYPNN----RVMIWDD--LKKQVVIC--LE-FNAPVKGVRLRR------------- 109 (424)
Q Consensus 52 ~~i~~~~~~~~~~~l~~~~~~~~~~~~d~----~i~iwd~--~~~~~~~~--~~-~~~~v~~~~~~~------------- 109 (424)
..+....|.+.+..+++.++-. ...|| ++++||+ .+++.+.. +. +...+..+++++
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~--~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVT--PNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEE--ECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cCcCHHHHHhcCCCEEEEEEEE--ECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 3566677777776555333200 00256 9999999 99988744 44 566676666653
Q ss_pred --CceEEE-e-e------ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCC---eEEEEeCCCCCC
Q psy3710 110 --DKIVVV-L-E------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSG---HVHLVDLADPER 176 (424)
Q Consensus 110 --~~~~~~-~-~------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg---~i~i~d~~~~~~ 176 (424)
+..++. + + +.|++||+. +.....+..+.. .+.+++|+|+++.|++ ++.++ .|++||+.++ +
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~--g~~~~~l~~~~~--~v~~~~~Spdg~~la~-~s~~~~~~~i~~~d~~tg-~ 214 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYD--GYNQFVVHRSPQ--PLMSPAWSPDGSKLAY-VTFESGRSALVIQTLANG-A 214 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETT--SCSCEEEEEESS--CEEEEEECTTSSEEEE-EECTTSSCEEEEEETTTC-C
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCC--CCCCEEEeCCCC--cceeeEEcCCCCEEEE-EEecCCCcEEEEEECCCC-c
Confidence 333333 2 2 799999985 344566666653 4888999999999998 66664 9999999985 3
Q ss_pred CCcccccccCCeEEEEEccCCCEEE-EEecC--CcEEEEEECCCcceeeEEec---ceeeeeecCCCCeEEEEeecCC--
Q psy3710 177 PPLDIAAHEAPLSCIALNQTGTRLA-TASYK--GTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNSLLAFPGRKSG-- 248 (424)
Q Consensus 177 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d--~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg-- 248 (424)
...+..|...+.+++|+|+|+.|+ +++.+ .. |++||+.+++.. .+.. ....++|+|++..+++++..++
T Consensus 215 -~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~-i~~~d~~~~~~~-~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 215 -VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLN-LYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP 291 (415)
T ss_dssp -EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCE-EEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred -EEEeecCCCcccCEEEcCCCCEEEEEEecCCCce-EEEEECCCCCEE-eCcCCCCcccceEECCCCCEEEEEECCCCCc
Confidence 345677888999999999999888 55544 45 899999887753 3332 3677899999999988665566
Q ss_pred eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEEECCCCceee----------eeccCCcEE
Q psy3710 249 HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK---GTLIRVFDTGSGQKLN----------ELRRDSSYL 315 (424)
Q Consensus 249 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~~i~iwd~~~~~~~~----------~~~~~~~~l 315 (424)
.|++||+.+++ ...+..+...+.+++|+|||++|++++.+ .. |++||+.+++... .|+|+|++|
T Consensus 292 ~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l 368 (415)
T 2hqs_A 292 QVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQVLSSTFLDETPSLAPNGTMV 368 (415)
T ss_dssp EEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEEECCCSSSCEEEEECTTSSEE
T ss_pred EEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEEEecCCCCcCCeEEcCCCCEE
Confidence 67788988765 33444677789999999999999998875 46 9999999876532 467999999
Q ss_pred EEEeCCC---cEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC
Q psy3710 316 CVSSDHG---TVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN 377 (424)
Q Consensus 316 ~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 377 (424)
++++.++ .|++||+..+ ...+ +..+.+.+..++|+|...
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~-~~~~----------------------l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGR-FKAR----------------------LPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEETTEEEEEEEETTSC-CEEE----------------------CCCSSSEEEEEEECCCCC
T ss_pred EEEEcCCCccEEEEEECCCC-cEEE----------------------eeCCCCCCcCCccccccc
Confidence 9988877 7999998753 3222 223445678889998654
No 134
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.3e-25 Score=217.55 Aligned_cols=303 Identities=16% Similarity=0.105 Sum_probs=214.1
Q ss_pred eEEEEECCCCCeeEeecCCeEEEEeCCcCcc--ccccccc----------------CCCeeeEEEeccCceEEEEeCCcC
Q psy3710 13 LLYAGFNQDQGCFACGMEDGFRIYNCDPLKE--KERQDFT----------------DGGLGHVEMLFRCNYLALVGGGTH 74 (424)
Q Consensus 13 V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~--~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~~~~ 74 (424)
+..+.|. |+.+++++.++| +||+.+++. ......+ ...+..++|+|+ +.++++.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~---- 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT---- 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE----
T ss_pred CCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE----
Confidence 4456777 666776667779 999998876 3322211 146889999999 7777766
Q ss_pred CCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCC-----CceeEEEeeCCCC------
Q psy3710 75 PKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQC-----PQQLHVFETNPNP------ 141 (424)
Q Consensus 75 ~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~-----~~~~~~~~~~~~~------ 141 (424)
++.+++||+.+++......+...+.+++|+||+..+++ ++.|++|++. + ++...........
T Consensus 100 ----~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~-~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 100 ----QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGG-KLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp ----TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECB-CTTSCCCCCEESCSCCBTTEEESSC
T ss_pred ----CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecC-cccccCCCcEEeccCCCCCeEcccc
Confidence 68999999998877666667788999999999977765 8999999997 4 4443322222111
Q ss_pred ------CeeEEEeecCCCCeEEEeec---------------------------------cCCeEEEEeCCCCCCCCccc-
Q psy3710 142 ------KGLCVLCPNSNNSLLAFPGR---------------------------------KSGHVHLVDLADPERPPLDI- 181 (424)
Q Consensus 142 ------~~~~~~~~~~~~~~l~~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~- 181 (424)
..+..+.|+|||++|++ ++ .+..|.+||+.++ ......
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~-~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~~~~~~~ 252 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAF-YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-KTVYLQT 252 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEE-EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-EEEECCC
T ss_pred hhhhhcCCCceEEECCCCCEEEE-EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-ceEeecc
Confidence 01357889999999998 54 4578999999875 222222
Q ss_pred -ccccCCeEEEEEccCCCEEEEEecCC-----cEEEEEECCCcceeeEEe-c--c-----eeeeeecC--CCCeEEEEee
Q psy3710 182 -AAHEAPLSCIALNQTGTRLATASYKG-----TLIRVFDTGSGQKLNELR-R--G-----LCVLCPNS--NNSLLAFPGR 245 (424)
Q Consensus 182 -~~~~~~v~~~~~~~~~~~l~~~~~d~-----~~i~iwd~~~~~~~~~~~-~--~-----~~~~~~~~--~~~~~~~~~~ 245 (424)
..|...+.+++|+|||+.|++++.++ . |++||+.+++....+. . . ...++++| ++. +++++.
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~ 330 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSR 330 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEEC
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEc
Confidence 25667899999999999999988776 7 9999999984333332 1 1 24568999 877 555688
Q ss_pred cCCeEEEEeCCCCCCCCeeeccCCCCeEE-EEEcCCCCEEEEEeCC-C----cEEEEEECCCCcee----------eeec
Q psy3710 246 KSGHVHLVDLADPERPPLDIAAHEAPLSC-IALNQTGTRLATASYK-G----TLIRVFDTGSGQKL----------NELR 309 (424)
Q Consensus 246 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d-~----~~i~iwd~~~~~~~----------~~~~ 309 (424)
.++.+++|++.........+..|...+.. ++|+|+|+.|+.++.+ + . |..||+.+++.. ..|+
T Consensus 331 ~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~-l~~~d~~~~~~~~l~~~~~~~~~~~s 409 (706)
T 2z3z_A 331 RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERH-FYCIDIKGGKTKDLTPESGMHRTQLS 409 (706)
T ss_dssp TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBE-EEEEETTCCCCEESCCSSSEEEEEEC
T ss_pred cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEE-EEEEEcCCCCceeccCCCceEEEEEC
Confidence 88989998876333344556677777877 7999999988766554 3 4 888888776422 2478
Q ss_pred cCCcEEEEEeCC----CcEEEEEccccc
Q psy3710 310 RDSSYLCVSSDH----GTVHVFSVDEAQ 333 (424)
Q Consensus 310 ~~~~~l~~~~~d----~~i~iw~~~~~~ 333 (424)
|+|++++....+ +.|++||+.+++
T Consensus 410 pdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 410 PDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 999988876543 569999998875
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4.2e-25 Score=215.21 Aligned_cols=292 Identities=13% Similarity=0.107 Sum_probs=210.6
Q ss_pred cCCeEEEEecCCceEEEe----ec-----cEEEEeecCCCceeEEEeeCCCC----------------------CeeEEE
Q psy3710 99 NAPVKGVRLRRDKIVVVL----EG-----LIKVYTFIQCPQQLHVFETNPNP----------------------KGLCVL 147 (424)
Q Consensus 99 ~~~v~~~~~~~~~~~~~~----~~-----~i~v~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 147 (424)
...+.+++|+||+..+++ ++ .|++||+. +++....+..+... ..+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 456899999999987775 45 79999996 66655555443322 235678
Q ss_pred eecCCCCeEEEeeccCCeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec
Q psy3710 148 CPNSNNSLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 226 (424)
Q Consensus 148 ~~~~~~~~l~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 226 (424)
+|+|||++|++ ++. +.|++||+.++.. ....+..|...+..++|+|||++|++++. +. |++||+.+++.......
T Consensus 115 ~~SpDg~~l~~-~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~-i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLF-PLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RN-LWVIDLASGRQMQLTAD 190 (741)
T ss_dssp EECTTSSEEEE-EET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TE-EEEEETTTTEEEECCCC
T ss_pred EECCCCCEEEE-EeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-Cc-EEEEecCCCCEEEeccC
Confidence 99999999998 554 9999999987510 45567778889999999999999999875 57 99999998876544332
Q ss_pred c-------------------eeeeeecCCCCeEEEEeecCC--------------------------------eEEEEeC
Q psy3710 227 G-------------------LCVLCPNSNNSLLAFPGRKSG--------------------------------HVHLVDL 255 (424)
Q Consensus 227 ~-------------------~~~~~~~~~~~~~~~~~~~dg--------------------------------~i~i~d~ 255 (424)
+ ...++|+|+++.++++....+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 2 256899999999998554332 8889999
Q ss_pred CC-CCCCCeeec-cCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEECCCCceee----------------eeccCC
Q psy3710 256 AD-PERPPLDIA-AHEAPLSCIALNQTGTRLATASY-----KGTLIRVFDTGSGQKLN----------------ELRRDS 312 (424)
Q Consensus 256 ~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-----d~~~i~iwd~~~~~~~~----------------~~~~~~ 312 (424)
.+ ++....... .|...+..++| |||++|++++. +.. |++||+.+++... .|+|||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 87 653222221 47788999999 99999998764 456 9999999876432 367899
Q ss_pred cEEEEEeCCCcEEEEEccc-cccccccccceeeeccCccccCCceeeEEeecCCCceEE-EEecCCCeEEEEe-ccC--c
Q psy3710 313 SYLCVSSDHGTVHVFSVDE-AQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCIC-AFGADSNSIIVIC-ADG--S 387 (424)
Q Consensus 313 ~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~l~~~~-~dg--~ 387 (424)
+++++++.||.++||.+.. ++ ...+. .+...+..+ +|+||++.|++.+ .++ .
T Consensus 349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~----------------------~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~ 405 (741)
T 2ecf_A 349 SILWSSERTGFQHLYRIDSKGK-AAALT----------------------HGNWSVDELLAVDEKAGLAYFRAGIESARE 405 (741)
T ss_dssp CEEEEECTTSSCEEEEECSSSC-EEESC----------------------CSSSCEEEEEEEETTTTEEEEEECSSCTTC
T ss_pred eEEEEecCCCccEEEEEcCCCC-eeeee----------------------ecceEEEeEeEEeCCCCEEEEEEeCCCCce
Confidence 9999999999888887762 22 22111 122334455 6999999886554 455 8
Q ss_pred EEEEEecCCcceeee----eehhhheecCCCceeeEE
Q psy3710 388 YYKFMFNSKGECWRD----VYIQFLEMTNDSNLLSCI 420 (424)
Q Consensus 388 v~~~~~~~~~~~~~~----~~~~~~~~~~d~~~l~~~ 420 (424)
+++|+++..+...+. .....+.++|||++|+..
T Consensus 406 ~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 406 SQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp BEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEE
T ss_pred EEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEE
Confidence 999999754443221 223457899999998764
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1.4e-24 Score=190.56 Aligned_cols=275 Identities=12% Similarity=0.110 Sum_probs=197.8
Q ss_pred EEECCCCCe-eEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE-
Q psy3710 16 AGFNQDQGC-FACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV- 92 (424)
Q Consensus 16 ~~~s~~g~~-la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~- 92 (424)
..|.+++.+ ++++..++ |.+||.++++.......+.... .++++|+++.+++++.. ++.|.+||..+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF------CQTLVQIETQLEPPK 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST------TCEEEEEECSSSSCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC------CCeEEEEECCCCcee
Confidence 456776665 44666555 9999999988865555555556 89999999988888753 68999999999987
Q ss_pred EEEEeecCCeEE-EEecCCceEEEe---e-c--cEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCe
Q psy3710 93 VICLEFNAPVKG-VRLRRDKIVVVL---E-G--LIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGH 165 (424)
Q Consensus 93 ~~~~~~~~~v~~-~~~~~~~~~~~~---~-~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~ 165 (424)
...+........ ++|+|++..++. + + .|.+||+. .++.+..+.... ....++++|+++++++++..++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFISTIPIPY---DAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEEEECCT---TEEEEEECTTSSCEEEEEETTTT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEEEECCC---CccceEECCCCCEEEEEecCCCc
Confidence 666765444455 999999976665 3 3 89999996 677776665543 24788999999987775666688
Q ss_pred -EEEEeCCCCCCCC---cccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcce---eeEEecc--eeeeeecC
Q psy3710 166 -VHLVDLADPERPP---LDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQK---LNELRRG--LCVLCPNS 235 (424)
Q Consensus 166 -i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~---~~~~~~~--~~~~~~~~ 235 (424)
|.+|++....... ............++|+|+|++++.++ .++. |.+||+.+++. +..+..+ ...++++|
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~~~~~sp 230 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGTNNLPGTIVVSR 230 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEECSSCCCCEEECT
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccCCCCCceEEECC
Confidence 9999998642211 11113345679999999999665554 5778 99999999887 7666644 56789999
Q ss_pred CCCeEEEEeecCCeEEEEeCCCCCCC-Ceeecc----CCC---CeEEEEEcCCCCEEEEEeCC-CcEEEEEECCCCc
Q psy3710 236 NNSLLAFPGRKSGHVHLVDLADPERP-PLDIAA----HEA---PLSCIALNQTGTRLATASYK-GTLIRVFDTGSGQ 303 (424)
Q Consensus 236 ~~~~~~~~~~~dg~i~i~d~~~~~~~-~~~~~~----~~~---~v~~~~~~~~~~~l~~~~~d-~~~i~iwd~~~~~ 303 (424)
+++.++++...++.|.+||+.+++.. ...+.. +.. ....++|+|||++|++++.+ +. |.+||+....
T Consensus 231 dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~ 306 (331)
T 3u4y_A 231 DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE-LKVFTISGKV 306 (331)
T ss_dssp TSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE-EEEEETTSCE
T ss_pred CCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCc-EEEEEecCCc
Confidence 99998887777889999999876531 111111 111 22558999999988776665 46 8999987644
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=8.5e-25 Score=212.53 Aligned_cols=302 Identities=11% Similarity=0.085 Sum_probs=210.3
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCC---CeeeEEEeccCceEEEEeCCcCC--CcCCCeEEE
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDG---GLGHVEMLFRCNYLALVGGGTHP--KYPNNRVMI 84 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~~--~~~d~~i~i 84 (424)
..+.+++|+|||++++++ .++ |++||+.+++.......+.. .+..++|+|+++++++++..... ...++.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~~-~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYRE-QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCCC-SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEEe-CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 346789999999988774 455 99999998877554544443 48899999999999998743210 012489999
Q ss_pred EECCCCcEEEEEe----ecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCC----------------
Q psy3710 85 WDDLKKQVVICLE----FNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPK---------------- 142 (424)
Q Consensus 85 wd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~---------------- 142 (424)
||+.+++. ..+. +...+..++|+||+..++. ++.|++|++. +++.......+....
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHV-GKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSS-SSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECC-CCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998876 3333 2334889999999977765 7899999986 555544443322221
Q ss_pred eeEEEeecCCCCeEEEeeccCC----------------------------------eEEEEeCCCCCCCCcccccc----
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKSG----------------------------------HVHLVDLADPERPPLDIAAH---- 184 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~dg----------------------------------~i~i~d~~~~~~~~~~~~~~---- 184 (424)
....+.|+|||+.|++ ++.++ .|++||+.++ .....+..+
T Consensus 174 ~~~~~~~SpDg~~la~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~-~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAY-AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP-THDLEMMPPDDPR 251 (723)
T ss_dssp SSEEEEECTTSSEEEE-EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS-CCCEECCCCCCGG
T ss_pred CcceEEECCCCCEEEE-EEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC-ceeEEeeCCccCC
Confidence 2267899999999998 54432 7999999876 333444433
Q ss_pred --cCCeEEEEEccCCCEEEEEecC----CcEEEEEECCCcceeeEEecc----e----eeeeecCCCCeEEEE-eecCC-
Q psy3710 185 --EAPLSCIALNQTGTRLATASYK----GTLIRVFDTGSGQKLNELRRG----L----CVLCPNSNNSLLAFP-GRKSG- 248 (424)
Q Consensus 185 --~~~v~~~~~~~~~~~l~~~~~d----~~~i~iwd~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~-~~~dg- 248 (424)
...+..++|+|||+++++.+.. .. |++||+.+++....+..+ + ..++|+|+++.+++. +..++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 6678999999999988776543 45 999999998876654322 2 367899999998886 56677
Q ss_pred -----eEEEEeC-CCCCC-CCeeeccCCCCeEE-EEEcCCCCEEEEEeCC---CcEEEEEECCCCc--e-----------
Q psy3710 249 -----HVHLVDL-ADPER-PPLDIAAHEAPLSC-IALNQTGTRLATASYK---GTLIRVFDTGSGQ--K----------- 304 (424)
Q Consensus 249 -----~i~i~d~-~~~~~-~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d---~~~i~iwd~~~~~--~----------- 304 (424)
.|++||+ ..+.. ....+..+...+.. ++|+|||+.|+..+.+ +. +++|++.... .
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-~~l~~~~~~~~~~~~~l~~~~~~~ 409 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR-RQLYSANTVGNFNRQCLSCDLVEN 409 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC-CEEEEECSSTTCCCBCSSTTSSSS
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc-eEEEEEeCCCCCCcceecccccCC
Confidence 5777773 33320 12333334444554 6999999999877665 67 8999875321 1
Q ss_pred ----eeeeccCCcEEEEEe
Q psy3710 305 ----LNELRRDSSYLCVSS 319 (424)
Q Consensus 305 ----~~~~~~~~~~l~~~~ 319 (424)
...|+|+|++++...
T Consensus 410 ~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 410 CTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp CCCCEEEECTTSSEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEc
Confidence 124678888877654
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=5.6e-24 Score=188.51 Aligned_cols=268 Identities=15% Similarity=0.069 Sum_probs=206.3
Q ss_pred cCCceEEEEECCCCCeeEeecC-------Ce-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCC
Q psy3710 9 YKNGLLYAGFNQDQGCFACGME-------DG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNN 80 (424)
Q Consensus 9 h~~~V~~~~~s~~g~~la~g~~-------~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~ 80 (424)
....+..++|+|+|+++++++. ++ |.+||..+++....... ......+.++++++.++++... ++
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~------~~ 111 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTV------NS 111 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETT------TT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecC------CC
Confidence 4567889999999998887663 34 99999998877555444 3456789999999988777653 68
Q ss_pred eEEEEECCCCcEEEEEeecC----------CeEEEEecCCceEEEe-----eccEEEEeecCCCceeEEEeeCCCCCeeE
Q psy3710 81 RVMIWDDLKKQVVICLEFNA----------PVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHVFETNPNPKGLC 145 (424)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 145 (424)
.|.+||..+++.+..+.... .+.+++|+|++..++. ++.|.+||.. +.+....+..... ...
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~--~~~ 188 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG-NIKLKTAIQNTGK--MST 188 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT-TTEEEEEECCCCT--TCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC-CCceEEEecCCCC--ccc
Confidence 99999999999988887422 2788999999854443 4679999996 6777776663332 244
Q ss_pred EEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccc----ccCCeEEEEEccCCCEEEEEecC-CcEEEEEECCCcce
Q psy3710 146 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA----HEAPLSCIALNQTGTRLATASYK-GTLIRVFDTGSGQK 220 (424)
Q Consensus 146 ~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-~~~i~iwd~~~~~~ 220 (424)
.+.++|+++.+++ +..++.|.+||+.++ +....+.. +...+..++|+|++++++.++.+ +. |.+||..+++.
T Consensus 189 ~~~~s~dg~~l~~-~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~ 265 (353)
T 3vgz_A 189 GLALDSEGKRLYT-TNADGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNI 265 (353)
T ss_dssp CCEEETTTTEEEE-ECTTSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCE
T ss_pred eEEECCCCCEEEE-EcCCCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcE
Confidence 5788999999998 778999999999876 44444332 45668899999999987777655 77 99999999988
Q ss_pred eeEEecc-eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCC
Q psy3710 221 LNELRRG-LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 291 (424)
Q Consensus 221 ~~~~~~~-~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 291 (424)
+..+..+ ...++++|+++.++++...++.|.+||..+++. ...+. ....+.+++|+|+|++|+.+..++
T Consensus 266 ~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 266 LAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV-VKTFD-TPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEEEE-CCSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeE-EEEEe-cCCCCCeEEEcCCCCEEEEEEccc
Confidence 8777644 456889999999888777899999999988653 23332 344789999999999888777664
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=2.7e-24 Score=189.19 Aligned_cols=251 Identities=14% Similarity=0.137 Sum_probs=193.9
Q ss_pred CCCeEEEEECCCCcEEEEEeecC---CeEEEEecCCceEE-Ee---eccEEEEeecCCCceeEEEeeCCC---CCeeEEE
Q psy3710 78 PNNRVMIWDDLKKQVVICLEFNA---PVKGVRLRRDKIVV-VL---EGLIKVYTFIQCPQQLHVFETNPN---PKGLCVL 147 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~-~~---~~~i~v~~~~~~~~~~~~~~~~~~---~~~~~~~ 147 (424)
.++.|.+||..+++.+..+.... .+..++|+|++..+ ++ ++.|.+||+. +++.+..+..... ...+..+
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV-TGETLGRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT-TCCEEEEEECCBTTEEEECTTCE
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECC-CCCeEeeEEcCCcccccccccce
Confidence 47999999999999998888666 68999999998543 33 6789999986 6666666654220 0023457
Q ss_pred eecCCCCeEEEeec------------cCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEEC
Q psy3710 148 CPNSNNSLLAFPGR------------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDT 215 (424)
Q Consensus 148 ~~~~~~~~l~~~~~------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~ 215 (424)
.++|+++++++ +. .++.|.+||+.++ +....+.. ...+.+++|+|+|++++++ ++. |++||+
T Consensus 88 ~~s~dg~~l~~-~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~-i~~~d~ 161 (337)
T 1pby_B 88 ALSPDGKTLAI-YESPVRLELTHFEVQPTRVALYDAETL-SRRKAFEA-PRQITMLAWARDGSKLYGL--GRD-LHVMDP 161 (337)
T ss_dssp EECTTSSEEEE-EEEEEEECSSCEEECCCEEEEEETTTT-EEEEEEEC-CSSCCCEEECTTSSCEEEE--SSS-EEEEET
T ss_pred EECCCCCEEEE-EecccccccccccccCceEEEEECCCC-cEEEEEeC-CCCcceeEECCCCCEEEEe--CCe-EEEEEC
Confidence 88999999888 54 5799999999875 44444433 4567889999999988887 577 999999
Q ss_pred CCcceeeEEecce--eeeeecCCCCeEEEEeecCC-----------------------eEEEEeCCCCCCCCeeeccCCC
Q psy3710 216 GSGQKLNELRRGL--CVLCPNSNNSLLAFPGRKSG-----------------------HVHLVDLADPERPPLDIAAHEA 270 (424)
Q Consensus 216 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dg-----------------------~i~i~d~~~~~~~~~~~~~~~~ 270 (424)
.+++....+..+. ....++|++..+++++..++ .|.+||+.+++.....+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 241 (337)
T 1pby_B 162 EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241 (337)
T ss_dssp TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC
Confidence 9998887776543 45578888887776554444 4689999987644334456777
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee-----------eccCCcEEEEEeCCCcEEEEEcccccccccc
Q psy3710 271 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-----------LRRDSSYLCVSSDHGTVHVFSVDEAQKINKQ 338 (424)
Q Consensus 271 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 338 (424)
.+.+++|+|+|++++++ ++. |.+||+.+++.+.. |+|+|++|++++.++.|++||+.+++.+...
T Consensus 242 ~~~~~~~s~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA--YNV-LESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp CEEEEEECTTSSEEEEE--ESE-EEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred ceeeEEECCCCCEEEEe--CCe-EEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 88999999999999988 677 99999999877654 4689999999999999999999998765543
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1.6e-23 Score=183.92 Aligned_cols=256 Identities=11% Similarity=0.076 Sum_probs=187.5
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCC-CcccccccCCeEEEEEcc
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP-PLDIAAHEAPLSCIALNQ 195 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~ 195 (424)
++.|.+||.. +++....+..+. ... .++++|+++++++++..++.|.+||+.++ +. ...+..+..+..+++|+|
T Consensus 19 ~~~v~~~d~~-~~~~~~~~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~ 93 (331)
T 3u4y_A 19 LRRISFFSTD-TLEILNQITLGY--DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE-PPKVVAIQEGQSSMADVDITP 93 (331)
T ss_dssp GTEEEEEETT-TCCEEEEEECCC--CEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-SCEEEEEEECSSCCCCEEECT
T ss_pred CCeEEEEeCc-ccceeeeEEccC--Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-ceeEEecccCCCCccceEECC
Confidence 7899999996 677776666443 334 88999999988775666899999999986 44 556666666666699999
Q ss_pred CCCEEEEEecCC---cEEEEEECCCcceeeEEecc--eeeeeecCCCCeEEEEeecCCe-EEEEeCCCCCCCC---eeec
Q psy3710 196 TGTRLATASYKG---TLIRVFDTGSGQKLNELRRG--LCVLCPNSNNSLLAFPGRKSGH-VHLVDLADPERPP---LDIA 266 (424)
Q Consensus 196 ~~~~l~~~~~d~---~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dg~-i~i~d~~~~~~~~---~~~~ 266 (424)
+|++++++..++ . |.+||+.+++.+..+..+ ...++++|+++.+++++..++. |.+|++....... ....
T Consensus 94 dg~~l~~~~~~~~~~~-i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFN-MQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp TSSEEEECCCSSSSCE-EEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCEEEEecCCCCccc-EEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc
Confidence 999999655553 7 999999999888777644 6788999999988887888788 9999998644321 1111
Q ss_pred cCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCCCce---eee-----------eccCCcEEEEEe-CCCcEEEEEcc
Q psy3710 267 AHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQK---LNE-----------LRRDSSYLCVSS-DHGTVHVFSVD 330 (424)
Q Consensus 267 ~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~---~~~-----------~~~~~~~l~~~~-~d~~i~iw~~~ 330 (424)
.....+..++|+|+|++++.++ .++. |++||+.+++. +.. |+|+|+++++++ .++.|.+||+.
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred cCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 3455689999999999766655 5777 99999999887 543 568999776654 57889999999
Q ss_pred cccc--ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec-cCcEEEEEec
Q psy3710 331 EAQK--INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA-DGSYYKFMFN 394 (424)
Q Consensus 331 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~-dg~v~~~~~~ 394 (424)
+++. +...... ....+. +......++|+||+++|++++. ++.|.+|++.
T Consensus 252 ~~~~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 252 SGTLSFVKSFGHG--LLIDPR-------------PLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp TTEEEEEEEEECC--CCCCCG-------------GGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCceeeecccccc--cccCCC-------------CcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 8765 1111100 000000 0011245799999999977665 5699999997
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=4e-23 Score=183.01 Aligned_cols=272 Identities=16% Similarity=0.147 Sum_probs=203.8
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEE-e---eccEEEEeec
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVV-L---EGLIKVYTFI 126 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~---~~~i~v~~~~ 126 (424)
......++++++++.+++++........++.|.+||..+++.+..+.....+..++++|++..++ + ++.|.+||..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 44577899999999998877432111126799999999999999998877889999999986433 3 6899999996
Q ss_pred CCCceeEEEeeCCCC-------CeeEEEeecCCCCeEEEee-ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC
Q psy3710 127 QCPQQLHVFETNPNP-------KGLCVLCPNSNNSLLAFPG-RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT 198 (424)
Q Consensus 127 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 198 (424)
+++.+..+..+... .....+.++|+++.+++++ ..++.|.+||..++ +....+..+...+..++|+|+|+
T Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 120 -TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI-KLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp -TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT-EEEEEECCCCTTCCCCEEETTTT
T ss_pred -CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC-ceEEEecCCCCccceEEECCCCC
Confidence 67777777654322 2367789999999888744 35889999999876 45555554566688999999999
Q ss_pred EEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEc
Q psy3710 199 RLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALN 278 (424)
Q Consensus 199 ~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 278 (424)
++++++.++. |.+||..+++....+..+ . .++...+..++|+
T Consensus 198 ~l~~~~~~~~-i~~~d~~~~~~~~~~~~~-------------------------------~------~~~~~~~~~~~~s 239 (353)
T 3vgz_A 198 RLYTTNADGE-LITIDTADNKILSRKKLL-------------------------------D------DGKEHFFINISLD 239 (353)
T ss_dssp EEEEECTTSE-EEEEETTTTEEEEEEECC-------------------------------C------SSSCCCEEEEEEE
T ss_pred EEEEEcCCCe-EEEEECCCCeEEEEEEcC-------------------------------C------CCCCcccceEEEC
Confidence 9999999999 999999998877665421 0 0344567888999
Q ss_pred CCCCEEEEEeCC-CcEEEEEECCCCceeee----------eccCCcEEEEEe-CCCcEEEEEccccccccccccceeeec
Q psy3710 279 QTGTRLATASYK-GTLIRVFDTGSGQKLNE----------LRRDSSYLCVSS-DHGTVHVFSVDEAQKINKQSSLASASF 346 (424)
Q Consensus 279 ~~~~~l~~~~~d-~~~i~iwd~~~~~~~~~----------~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (424)
|+++++++++.+ +. |.+||+.+++.+.. |+|+++++++++ .++.|.+||+.+++.+.....
T Consensus 240 ~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~------ 312 (353)
T 3vgz_A 240 TARQRAFITDSKAAE-VLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT------ 312 (353)
T ss_dssp TTTTEEEEEESSSSE-EEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC------
T ss_pred CCCCEEEEEeCCCCE-EEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec------
Confidence 998877776655 66 99999988877654 567888655554 689999999988765433211
Q ss_pred cCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccC
Q psy3710 347 LPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADG 386 (424)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg 386 (424)
...+..++|+|||++|+++..++
T Consensus 313 -----------------~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 313 -----------------PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -----------------CSEEEEEEECTTSCEEEEEEECC
T ss_pred -----------------CCCCCeEEEcCCCCEEEEEEccc
Confidence 12346789999999888877764
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=5.1e-24 Score=206.41 Aligned_cols=275 Identities=13% Similarity=0.123 Sum_probs=203.5
Q ss_pred CceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK- 89 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~- 89 (424)
..|.+++|||| +.++.+.+..|++||+.+++..... .+.+.+..++|+|+++.++++. |+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~SpdG~~la~~~--------~~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLF-DTNEETASLDFSPVGDRVAYVR--------NHNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEE-CCTTCCTTCEECTTSSEEEEEE--------TTEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEcc-CCcccccCCcCCCCCCEEEEEE--------CCeEEEEecCcc
Confidence 57999999999 7777666666999999887654332 3466788899999999999865 78999999988
Q ss_pred ----CcEEEEEee-cCC--------------eEEEEecCCceEEEe-e--------------------------------
Q psy3710 90 ----KQVVICLEF-NAP--------------VKGVRLRRDKIVVVL-E-------------------------------- 117 (424)
Q Consensus 90 ----~~~~~~~~~-~~~--------------v~~~~~~~~~~~~~~-~-------------------------------- 117 (424)
++....... ... +.++.|+||+..+++ .
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 776654442 222 489999999977765 2
Q ss_pred ---ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCC-----eEEEEeCCCCCCCCcccc--cccC-
Q psy3710 118 ---GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSG-----HVHLVDLADPERPPLDIA--AHEA- 186 (424)
Q Consensus 118 ---~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg-----~i~i~d~~~~~~~~~~~~--~~~~- 186 (424)
..|.+||+. +++.............+..++|+||++.|++ ++.++ .|.+||+.++ .....+. .+..
T Consensus 232 ~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~-~~~~~~~~~~~v~~~d~~~g-~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 232 SHHVTVGIYHLA-TGKTVYLQTGEPKEKFLTNLSWSPDENILYV-AEVNRAQNECKVNAYDAETG-RFVRTLFVETDKHY 308 (706)
T ss_dssp CCEEEEEEEETT-TTEEEECCCCSCTTCEEEEEEECTTSSEEEE-EEECTTSCEEEEEEEETTTC-CEEEEEEEEECSSC
T ss_pred CCeeEEEEEECC-CCceEeeccCCCCceeEeeEEEECCCCEEEE-EEeCCCCCeeEEEEEECCCC-ceeeEEEEccCCCe
Confidence 468999986 5544333222233356788999999999988 66554 8999999875 2223222 2222
Q ss_pred --CeEEEEEcc--CCCEEEEEecCCcEEEEEECC-CcceeeEEecc---eee-eeecCCCCeEEEEeecCC----eEEEE
Q psy3710 187 --PLSCIALNQ--TGTRLATASYKGTLIRVFDTG-SGQKLNELRRG---LCV-LCPNSNNSLLAFPGRKSG----HVHLV 253 (424)
Q Consensus 187 --~v~~~~~~~--~~~~l~~~~~d~~~i~iwd~~-~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~dg----~i~i~ 253 (424)
.+..++|+| +|+++++++.++. +++|++. +++.+..+..+ +.. ++++|+++.+++++..++ .|+.|
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred ECccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 246789999 9999999999998 8999876 56666666544 333 789999999998887776 77778
Q ss_pred eCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEECCCCc
Q psy3710 254 DLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK----GTLIRVFDTGSGQ 303 (424)
Q Consensus 254 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~~i~iwd~~~~~ 303 (424)
|+.++. ...+ .|...+.+++|+|||++++..+.+ +. |++||+.+++
T Consensus 388 d~~~~~--~~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~-i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGK--TKDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRK-VTVTNIGKGS 437 (706)
T ss_dssp ETTCCC--CEES-CCSSSEEEEEECTTSSEEEEEEECSSCSCE-EEEEESSSCE
T ss_pred EcCCCC--ceec-cCCCceEEEEECCCCCEEEEEecCCCCCcE-EEEEECCCCe
Confidence 877654 2333 367789999999999988876443 46 9999999887
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.6e-23 Score=183.39 Aligned_cols=266 Identities=12% Similarity=0.111 Sum_probs=183.0
Q ss_pred eEeecCCe-EEEEeCCc-Ccc-cccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC--CCcE--EEEEe
Q psy3710 25 FACGMEDG-FRIYNCDP-LKE-KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL--KKQV--VICLE 97 (424)
Q Consensus 25 la~g~~~~-i~iw~~~~-~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~--~~~~--~~~~~ 97 (424)
+++++.++ |++|+++. ++. ......+...+..++|+|+++++++++.. ++.|.+|++. +++. +..+.
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeeccccc
Confidence 33435455 99999863 322 11122356678889999999999888843 4899999987 5553 34455
Q ss_pred ecCCeEEEEecCCceEEEe----eccEEEEeecCCC---ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEe
Q psy3710 98 FNAPVKGVRLRRDKIVVVL----EGLIKVYTFIQCP---QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVD 170 (424)
Q Consensus 98 ~~~~v~~~~~~~~~~~~~~----~~~i~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d 170 (424)
....+..++|+|++..++. ++.|.+||+. .+ +....+... ..+..++++|+++++++++..++.|.+||
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEGL---DGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECCC---TTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC-CCccccccccccCC---CCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 4558899999999975543 6789999995 33 233333332 33567789999998888454899999999
Q ss_pred CCCCCCCCc----cccc-ccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCC--cce--eeEEe---c------ceeee
Q psy3710 171 LADPERPPL----DIAA-HEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGS--GQK--LNELR---R------GLCVL 231 (424)
Q Consensus 171 ~~~~~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~--~~~--~~~~~---~------~~~~~ 231 (424)
+.+...... .... ....+..++|+|+++++++++ .++. |.+|++.. ++. ...+. . ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 986322221 1222 335788999999999776555 7788 99999953 432 22222 1 13358
Q ss_pred eecCCCCeEEEEeecCCeEEEEeCCC--CC-CCCeeeccCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEE--CCCCc
Q psy3710 232 CPNSNNSLLAFPGRKSGHVHLVDLAD--PE-RPPLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFD--TGSGQ 303 (424)
Q Consensus 232 ~~~~~~~~~~~~~~~dg~i~i~d~~~--~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd--~~~~~ 303 (424)
+++|+++.+++++..++.|.+||+.. +. .....+..+.. +..++|+|+|++|++++ .++. |.+|+ ..+++
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~-v~v~~~d~~~g~ 312 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH-ISVYEIVGEQGL 312 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE-EEEEEEETTTTE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe-EEEEEEcCCCce
Confidence 99999999988788899999999984 22 12223333333 88999999999888887 5677 99994 44543
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=2.6e-24 Score=209.16 Aligned_cols=298 Identities=10% Similarity=0.061 Sum_probs=203.9
Q ss_pred CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecC----CeEEEEecCCceEEEe--e---------
Q psy3710 53 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA----PVKGVRLRRDKIVVVL--E--------- 117 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~--~--------- 117 (424)
....++|+|+++++++ + .|++|++||+.+++....+.+.. .+.+++|+||+..+++ +
T Consensus 18 ~~~~~~~spdg~~~~~-~-------~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-E-------QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCBSSSSCBCCC-C-------SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred cccccEEcCCCcEEEE-e-------CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 4667899999997654 3 47999999999998877776432 4999999999987775 2
Q ss_pred -ccEEEEeecCCCceeEEEeeCCC-CCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCC--------
Q psy3710 118 -GLIKVYTFIQCPQQLHVFETNPN-PKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAP-------- 187 (424)
Q Consensus 118 -~~i~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------- 187 (424)
+.+.+||+. +++. ..+..... ...+..++|+|||+.|++ ++. +.|++||+.++ ........+...
T Consensus 90 ~~~i~~~d~~-~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~-~~~-~~i~~~~~~~g-~~~~~~~~~~~~~~~~g~~~ 164 (723)
T 1xfd_A 90 TGYYVLSKIP-HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIF-IFE-NNIYYCAHVGK-QAIRVVSTGKEGVIYNGLSD 164 (723)
T ss_dssp CSEEEEEESS-SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEE-EET-TEEEEESSSSS-CCEEEECCCBTTTEEEEECC
T ss_pred eeeEEEEECC-CCce-EeccCCccccccccccEECCCCCEEEE-EEC-CeEEEEECCCC-ceEEEecCCCCCceECcccc
Confidence 688999996 4443 33332221 122556899999999998 554 79999999876 444433333333
Q ss_pred ----------eEEEEEccCCCEEEEEecCC----------------------------------cEEEEEECCCcceeeE
Q psy3710 188 ----------LSCIALNQTGTRLATASYKG----------------------------------TLIRVFDTGSGQKLNE 223 (424)
Q Consensus 188 ----------v~~~~~~~~~~~l~~~~~d~----------------------------------~~i~iwd~~~~~~~~~ 223 (424)
+.+++|+|||+.|++++.++ . |++||+.+++....
T Consensus 165 ~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-l~~~d~~~~~~~~~ 243 (723)
T 1xfd_A 165 WLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS-LHVIGLNGPTHDLE 243 (723)
T ss_dssp HHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE-EEEEESSSSCCCEE
T ss_pred eeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeE-EEEEECCCCceeEE
Confidence 37899999999999987653 6 99999998876555
Q ss_pred Eec---------ceeeeeecCCCCeEEEEee---cCCeEEEEeCCCCCCCCeeeccCCCCeE----EEEEcCCCCEEEEE
Q psy3710 224 LRR---------GLCVLCPNSNNSLLAFPGR---KSGHVHLVDLADPERPPLDIAAHEAPLS----CIALNQTGTRLATA 287 (424)
Q Consensus 224 ~~~---------~~~~~~~~~~~~~~~~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~l~~~ 287 (424)
+.. .+..++|+|+++.+++... .+..|++||+.+++........+...+. .++|+|||+.|+..
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 543 2566899999987765433 2367999999887632222223344443 78999999987754
Q ss_pred --eCCC------cEEEEEE-CCCCc---e--e----------eeeccCCcEEEEEeCC---CcEEEEEccccc--ccccc
Q psy3710 288 --SYKG------TLIRVFD-TGSGQ---K--L----------NELRRDSSYLCVSSDH---GTVHVFSVDEAQ--KINKQ 338 (424)
Q Consensus 288 --~~d~------~~i~iwd-~~~~~---~--~----------~~~~~~~~~l~~~~~d---~~i~iw~~~~~~--~~~~~ 338 (424)
..++ . |.+|| ..+++ . + ..|+|+|+.|+..+.+ +.+++|++.... ....+
T Consensus 324 ~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l 402 (723)
T 1xfd_A 324 RAIPQGGRGKFYH-ITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCL 402 (723)
T ss_dssp EEECCSSSSCEEE-EEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCS
T ss_pred EecccCCCcceeE-EEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCccee
Confidence 4566 4 77788 33333 1 1 2478999999766655 789999987532 11111
Q ss_pred ccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec
Q psy3710 339 SSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA 384 (424)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 384 (424)
.. . ..+...+..++|+|||++|+....
T Consensus 403 ~~--------~-----------~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 403 SC--------D-----------LVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp ST--------T-----------SSSSCCCCEEEECTTSSEEEEECC
T ss_pred cc--------c-----------ccCCCCeEEEEECCCCCEEEEEcc
Confidence 10 0 002234667899999998887544
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=9e-23 Score=179.90 Aligned_cols=254 Identities=15% Similarity=0.152 Sum_probs=174.6
Q ss_pred eccEEEEeecCCC--ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCC--CCCC-CCcccccccCCeEEE
Q psy3710 117 EGLIKVYTFIQCP--QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA--DPER-PPLDIAAHEAPLSCI 191 (424)
Q Consensus 117 ~~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~--~~~~-~~~~~~~~~~~v~~~ 191 (424)
++.|++|++...+ +.+..+. +. ..+..++++|++++|++++..++.|.+|++. ++.. .+..+..+ ..+..+
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 89 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVD-VP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHI 89 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEE-CS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEE
T ss_pred CCeEEEEEECCCCcEEEeeeEe-cC--CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEE
Confidence 7899999995333 2233332 22 3355688999999988834445999999997 3311 12233333 378999
Q ss_pred EEccCCCEEEEEec-CCcEEEEEECC---CcceeeEEec--ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCe--
Q psy3710 192 ALNQTGTRLATASY-KGTLIRVFDTG---SGQKLNELRR--GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL-- 263 (424)
Q Consensus 192 ~~~~~~~~l~~~~~-d~~~i~iwd~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~-- 263 (424)
+|+|+++++++++. ++. |.+||+. ..+....+.. ....++++|++..+++++..++.|++||+.+......
T Consensus 90 ~~s~dg~~l~~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGN-VSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EECTTSSEEEEEETTTTE-EEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEEecCCCe-EEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 99999998877665 788 9999994 4444444443 3667889999999888666899999999987332211
Q ss_pred --eec-cCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCC--Cce-----e---------------eeeccCCcEEEE
Q psy3710 264 --DIA-AHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGS--GQK-----L---------------NELRRDSSYLCV 317 (424)
Q Consensus 264 --~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~--~~~-----~---------------~~~~~~~~~l~~ 317 (424)
... .....+..++|+|+++++++++ .++. |++|++.. ++. . ..|+|++++|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE
Confidence 122 2345788999999999776665 7788 99999953 321 1 246788988774
Q ss_pred -EeCCCcEEEEEcccc-ccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEe-ccCcEEEEEec
Q psy3710 318 -SSDHGTVHVFSVDEA-QKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVIC-ADGSYYKFMFN 394 (424)
Q Consensus 318 -~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~dg~v~~~~~~ 394 (424)
+..++.|.+|++... ..... ...+..+. .+..++|+|++++|++++ .++.|.+|+++
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~-------------------~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSK-------------------EGFQPTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEE-------------------EEEEECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EecCCCEEEEEEEcCCCCceEE-------------------eeeecCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 457899999999831 11110 00111122 266889999999999888 58999999887
Q ss_pred CC
Q psy3710 395 SK 396 (424)
Q Consensus 395 ~~ 396 (424)
..
T Consensus 308 ~~ 309 (343)
T 1ri6_A 308 GE 309 (343)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.4e-23 Score=181.03 Aligned_cols=252 Identities=11% Similarity=0.095 Sum_probs=189.9
Q ss_pred ecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEEEEEe-e-cCCeE
Q psy3710 28 GMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVICLE-F-NAPVK 103 (424)
Q Consensus 28 g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~-~-~~~v~ 103 (424)
++.++ |++||+.+++... ...|.+.+..++|+|+++++++.+ ++.|++||+.+ ++...... + ...+.
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEecccccccccc
Confidence 34555 9999998877653 333578899999999999999876 68999999998 87776555 2 36789
Q ss_pred EEEecCCceEEEe-e----ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCC
Q psy3710 104 GVRLRRDKIVVVL-E----GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP 178 (424)
Q Consensus 104 ~~~~~~~~~~~~~-~----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~ 178 (424)
+++|+|++..+++ . +...+|.+.........+..+. .+..+.|+|+++.+++++..++.+++|+++......
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL---PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS---SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC---CccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 9999999987776 2 4677776643333344443332 267789999999998658889999999975433455
Q ss_pred cccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECC-CcceeeEEecc---eeeeeecCCCCeEEEEeecC------
Q psy3710 179 LDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTG-SGQKLNELRRG---LCVLCPNSNNSLLAFPGRKS------ 247 (424)
Q Consensus 179 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d------ 247 (424)
..+..|...+.+++|+|+++.|+.++ .++. +++|++. .+.....+..+ ...++++|++..+++++..+
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 66777888999999999999888766 4888 9999876 44445555433 56688999999988866543
Q ss_pred ----CeEEEEeCCCCCCC-CeeeccCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy3710 248 ----GHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASYKGT 292 (424)
Q Consensus 248 ----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 292 (424)
+.|++||+.+++.. ...+.+|...+.+++|+|++++|++++.+..
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 67999999886532 2234478889999999999999998887653
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=6.1e-23 Score=180.54 Aligned_cols=264 Identities=9% Similarity=0.028 Sum_probs=194.5
Q ss_pred CeeEeecCCe-EEEEeCCcCcccccccccCC--CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec
Q psy3710 23 GCFACGMEDG-FRIYNCDPLKEKERQDFTDG--GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN 99 (424)
Q Consensus 23 ~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 99 (424)
++|++++.++ |.+||..+++.......... .+..++|+|+++.++++... ++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcC
Confidence 4677777666 99999998877554443221 47789999999888777643 689999999999998887743
Q ss_pred C------CeEEEEecCCceEEEe-e--------------ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEE
Q psy3710 100 A------PVKGVRLRRDKIVVVL-E--------------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 100 ~------~v~~~~~~~~~~~~~~-~--------------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (424)
. .+..++|+|++..++. + +.|.+||+. +++....+.... .+..++++|+++++++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~~~~~~~~~---~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE-TLSRRKAFEAPR---QITMLAWARDGSKLYG 151 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT-TTEEEEEEECCS---SCCCEEECTTSSCEEE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC-CCcEEEEEeCCC---CcceeEECCCCCEEEE
Confidence 3 6788999999954443 2 899999996 666666665432 2455689999999987
Q ss_pred eeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCC------------------------cEEEEEE
Q psy3710 159 PGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG------------------------TLIRVFD 214 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------~~i~iwd 214 (424)
+ ++.|.+||+.++ +....+..+.. ...+.|+|+++.++..+..+ . |.+||
T Consensus 152 -~--~~~i~~~d~~~~-~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~d 225 (337)
T 1pby_B 152 -L--GRDLHVMDPEAG-TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG-LLTMD 225 (337)
T ss_dssp -E--SSSEEEEETTTT-EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE-EEEEE
T ss_pred -e--CCeEEEEECCCC-cEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc-eEEEe
Confidence 5 689999999876 44333333320 11237899988776554332 3 68999
Q ss_pred CCCcceeeEEe-----cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeC
Q psy3710 215 TGSGQKLNELR-----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 215 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
+.+++.. .+. .....++++|++..++++ ++.|++||+.+++. ...+. ....+.+++|+|+|++|++++.
T Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 226 LETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNAS-IKRVP-LPHSYYSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp TTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEE-EEEEE-CSSCCCEEEECTTSCEEEEESB
T ss_pred CCCCCce-EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcC-cceec-CCCceeeEEECCCCCEEEEEcC
Confidence 9988765 322 124568999999988875 69999999987653 23332 3356789999999999999999
Q ss_pred CCcEEEEEECCCCceeeeec
Q psy3710 290 KGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 290 d~~~i~iwd~~~~~~~~~~~ 309 (424)
++. |++||+.+++.+..+.
T Consensus 300 ~~~-i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 300 LGD-LAAYDAETLEKKGQVD 318 (337)
T ss_dssp SSE-EEEEETTTCCEEEEEE
T ss_pred CCc-EEEEECcCCcEEEEEE
Confidence 999 9999999998877764
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=8.9e-23 Score=175.90 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=177.1
Q ss_pred CCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCC-CceeEEEeeCCCCCeeEEEeecCCCC
Q psy3710 78 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQC-PQQLHVFETNPNPKGLCVLCPNSNNS 154 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (424)
.|++|++||+.+++......+...+.+++|+|++.++++ ++.|.+||+. . ++.......+ ....+.++.|+|+++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~-~~~~~~~~~~~~-~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLA-GDPSPEKVDTGF-ATICNNDHGISPDGA 97 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESS-SCCSCEECCCTT-CCCBCSCCEECTTSS
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCC-CCCCceEecccc-ccccccceEECCCCC
Confidence 589999999999988877779999999999999987776 8899999996 4 5544433333 223466789999999
Q ss_pred eEEEeec--cCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEE-EEecCCcEEEEEEC--CCcceeeEEe---c
Q psy3710 155 LLAFPGR--KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLA-TASYKGTLIRVFDT--GSGQKLNELR---R 226 (424)
Q Consensus 155 ~l~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~~i~iwd~--~~~~~~~~~~---~ 226 (424)
++++ ++ .++...+|.++........+..+ ..+..++|+|+++.|+ +++.++. +++|++ .+++. ..+. .
T Consensus 98 ~l~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~-~~l~~~~~~~~~~-~~~~~~~~ 173 (297)
T 2ojh_A 98 LYAI-SDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQV-FDIYSMDIDSGVE-TRLTHGEG 173 (297)
T ss_dssp EEEE-EECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTE-EEEEEEETTTCCE-EECCCSSS
T ss_pred EEEE-EEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCc-eEEEEEECCCCcc-eEcccCCC
Confidence 9998 65 33445555443221334444444 3489999999999887 7778898 899985 34433 2332 3
Q ss_pred ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC-----------CcEEE
Q psy3710 227 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK-----------GTLIR 295 (424)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~~i~ 295 (424)
.+..++++|++..+++++..++.+++|++.........+..|...+..++|+|+|++|++++.+ +. |.
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~ 252 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQ 252 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EE
Confidence 3677899999999998777799999999874444556666788889999999999999988876 45 99
Q ss_pred EEECCCCceee--------------eeccCCcEEEEEeCCC
Q psy3710 296 VFDTGSGQKLN--------------ELRRDSSYLCVSSDHG 322 (424)
Q Consensus 296 iwd~~~~~~~~--------------~~~~~~~~l~~~~~d~ 322 (424)
+||+.+++... .|+|++++|++++.+.
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 99998875422 2567888888777653
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=9.4e-23 Score=192.92 Aligned_cols=268 Identities=12% Similarity=-0.004 Sum_probs=189.8
Q ss_pred cCCceEEEEECCCCCeeEeecC-Ce-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE-
Q psy3710 9 YKNGLLYAGFNQDQGCFACGME-DG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW- 85 (424)
Q Consensus 9 h~~~V~~~~~s~~g~~la~g~~-~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw- 85 (424)
+..+|++++|+|||++||+++. ++ ++||+++.++.......+...+..+.|+|+ +.+++..... .+....+|
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~----g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSK----GAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECST----TSCCEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCC----CCcceEEEE
Confidence 3568999999999999997765 66 999998666554433333467888999988 5555555211 13445554
Q ss_pred -EC-CCCcEEEEEeecCCeEEEEecCCc--eEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 86 -DD-LKKQVVICLEFNAPVKGVRLRRDK--IVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 86 -d~-~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
+. +.+... .+.....+...+|+|++ .++++ ++.+.+||+. +++.......+. ..+.++|||++|++
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~-~g~~~~l~~~~~-----~~~~~spDG~~la~- 166 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALD-GGGLRELARLPG-----FGFVSDIRGDLIAG- 166 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEE-TTEEEEEEEESS-----CEEEEEEETTEEEE-
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEcc-CCcEEEeecCCC-----ceEEECCCCCEEEE-
Confidence 54 123222 33333344456777766 45554 5566799996 555444433322 56789999999997
Q ss_pred eccC----CeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCC--cEEEEEECCCcceeeEEecc---eee
Q psy3710 160 GRKS----GHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG--TLIRVFDTGSGQKLNELRRG---LCV 230 (424)
Q Consensus 160 ~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~~i~iwd~~~~~~~~~~~~~---~~~ 230 (424)
++.+ +.|++||+.++ ....+..|...+..++|+|||+.|+++..++ . |++||+.+++.. .+..+ +..
T Consensus 167 ~~~~~~~~~~i~~~d~~~g--~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~~~~~~~~ 242 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSG--GLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLELPSKDFSS 242 (582)
T ss_dssp EEEEETTEEEEEEEETTTC--CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCCSCSHHHH
T ss_pred EEEcCCCCeEEEEEcCCCC--CceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccCCCcChhh
Confidence 5555 78999999875 3456778888999999999999999888888 7 999999988876 44433 333
Q ss_pred ee--------ecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcE--EEEEECC
Q psy3710 231 LC--------PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTL--IRVFDTG 300 (424)
Q Consensus 231 ~~--------~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~--i~iwd~~ 300 (424)
++ ++|++ .++++++.++.+++|++ ++. .. .+.+.+.+++|+ +++++++++.+... +.+||..
T Consensus 243 ~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~-~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 243 YRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GER-VE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp HCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEE-EC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred hhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCe-ec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 45 99999 88888999999999999 331 11 344678999999 99999998887543 5666655
Q ss_pred C
Q psy3710 301 S 301 (424)
Q Consensus 301 ~ 301 (424)
+
T Consensus 315 ~ 315 (582)
T 3o4h_A 315 E 315 (582)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.8e-23 Score=202.89 Aligned_cols=314 Identities=11% Similarity=0.051 Sum_probs=211.5
Q ss_pred EEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCC---CeeeEEEeccCceEEEEeCCcC--CCcCCCeEEEEECCC
Q psy3710 15 YAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDG---GLGHVEMLFRCNYLALVGGGTH--PKYPNNRVMIWDDLK 89 (424)
Q Consensus 15 ~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~~~~--~~~~d~~i~iwd~~~ 89 (424)
.++|+|||++++++.++.|++||+.+++.......+.. .+..++|+|+++++++++.... ....+++|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 67999999777766544499999998887544443322 4889999999999998874100 000158999999998
Q ss_pred CcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEE-eeCCCC---------------CeeEEEeecC
Q psy3710 90 KQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVF-ETNPNP---------------KGLCVLCPNS 151 (424)
Q Consensus 90 ~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~ 151 (424)
++.+........+..++|+|||..++. ++.|++|++. +++..... .++... .....++|+|
T Consensus 100 g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~-~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 100 GEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRP-GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESST-TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CccccceecCcccccceECCCCCEEEEEECCeEEEEeCC-CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 876322223467899999999977765 8899999986 44433221 111110 0013689999
Q ss_pred CCCeEEEeeccCC----------------------------------eEEEEeCCCCCC----CC---cccccccCCeEE
Q psy3710 152 NNSLLAFPGRKSG----------------------------------HVHLVDLADPER----PP---LDIAAHEAPLSC 190 (424)
Q Consensus 152 ~~~~l~~~~~~dg----------------------------------~i~i~d~~~~~~----~~---~~~~~~~~~v~~ 190 (424)
||+.|++ ++.|. .|++||+.++.. .+ ..+.+|...+..
T Consensus 179 DG~~la~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 179 NGKFLAY-AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TSSEEEE-EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCEEEE-EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 9999998 55442 788999987521 01 234568888999
Q ss_pred EEEccCCCEEEEEecC----CcEEEEEE----CCCcceeeEEe----cc---ee-----eeeecCCCCeEEEE-eecCC-
Q psy3710 191 IALNQTGTRLATASYK----GTLIRVFD----TGSGQKLNELR----RG---LC-----VLCPNSNNSLLAFP-GRKSG- 248 (424)
Q Consensus 191 ~~~~~~~~~l~~~~~d----~~~i~iwd----~~~~~~~~~~~----~~---~~-----~~~~~~~~~~~~~~-~~~dg- 248 (424)
++|+||++.+++.... .. |.+|| ..+++....+. .+ +. ...|+|+++.+++. +..+|
T Consensus 258 ~~~SpD~~~~~~~~~~~~~~~~-l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~ 336 (719)
T 1z68_A 258 LTWVTDERVCLQWLKRVQNVSV-LSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGY 336 (719)
T ss_dssp EEESSSSEEEEEEEESSTTEEE-EEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSC
T ss_pred eEEeCCCeEEEEEeccccCeEE-EEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCc
Confidence 9999998777664422 24 88899 87776554441 21 33 67899999987763 44555
Q ss_pred -eEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEECCC--C----cee-----------
Q psy3710 249 -HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGS--G----QKL----------- 305 (424)
Q Consensus 249 -~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~--~----~~~----------- 305 (424)
.|++||+.+++ ...+..+...+..+.++ +++.|+..+.+ +. .++|.+.. + +++
T Consensus 337 ~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~-~~l~~~~~~~g~~~~~~l~~~~~~~~~~~ 412 (719)
T 1z68_A 337 KHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGR-RNIYRISIGSYPPSKKCVTCHLRKERCQY 412 (719)
T ss_dssp EEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTC-BEEEEEECSSSSCCEEESSTTTTTTTBCB
T ss_pred eEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCce-EEEEEEeCCCCCCCceeccCccCCCCCce
Confidence 57777876654 34555666678888877 88877777665 66 88887643 3 111
Q ss_pred --eeeccCCcEEEEE-eCC--CcEEEEEccccccc
Q psy3710 306 --NELRRDSSYLCVS-SDH--GTVHVFSVDEAQKI 335 (424)
Q Consensus 306 --~~~~~~~~~l~~~-~~d--~~i~iw~~~~~~~~ 335 (424)
..|+|++++++.. +.. ..+.+||+.+++..
T Consensus 413 ~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 413 YTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp EEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred EEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 2367888877643 333 46889999887643
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=2.6e-21 Score=170.91 Aligned_cols=262 Identities=14% Similarity=0.133 Sum_probs=172.8
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc--CCeEEEEeCCCCCC-CCcccccccCCeEEEEE
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK--SGHVHLVDLADPER-PPLDIAAHEAPLSCIAL 193 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~ 193 (424)
++.|.+|+++.....+..+...........++++|+++ |++++.. ++.|.+|++.++.. .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 45688888864322222211111112244578899999 5552432 68999999976421 22333457778899999
Q ss_pred ccCCCEEEEEe-cCCcEEEEEECCC-c--ceeeEEec------------ceeeeeecCCCCeEEEEeecCCeEEEEeCCC
Q psy3710 194 NQTGTRLATAS-YKGTLIRVFDTGS-G--QKLNELRR------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD 257 (424)
Q Consensus 194 ~~~~~~l~~~~-~d~~~i~iwd~~~-~--~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 257 (424)
+|+|++|++++ .++. |.+|++.. + +.+..+.. ....++++|++. ++++...++.|++|++..
T Consensus 94 spdg~~l~~~~~~~~~-v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 94 DEARQLVYSANYHKGT-AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp ETTTTEEEEEETTTTE-EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCE-EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECC
Confidence 99999988888 6788 99999963 2 33333322 145689999999 777777899999999983
Q ss_pred CCCCC--eeec-cCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEECCC--Ccee--------------------eeeccC
Q psy3710 258 PERPP--LDIA-AHEAPLSCIALNQTGTRLATA-SYKGTLIRVFDTGS--GQKL--------------------NELRRD 311 (424)
Q Consensus 258 ~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~-~~d~~~i~iwd~~~--~~~~--------------------~~~~~~ 311 (424)
..... ..+. .....+..++|+|||++++++ ..++. |++|++.. ++.. ..|+|+
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 22211 1111 223467889999999977665 45667 99999874 4321 237899
Q ss_pred CcEE-EEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEecc-CcEE
Q psy3710 312 SSYL-CVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICAD-GSYY 389 (424)
Q Consensus 312 ~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d-g~v~ 389 (424)
|++| ++...++.|.+|++.....+.. +..+..+...+..++|+|||++|++++.+ +.|.
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~-------------------~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTL-------------------IQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEE-------------------EEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEE-------------------eEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 9977 5556689999999974221111 11122233446789999999999988765 8999
Q ss_pred EEEecC-Ccceee
Q psy3710 390 KFMFNS-KGECWR 401 (424)
Q Consensus 390 ~~~~~~-~~~~~~ 401 (424)
+|+++. ++++..
T Consensus 312 v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 312 LYARDLTSGKLSL 324 (347)
T ss_dssp EEEECTTTCCEEE
T ss_pred EEEEeCCCCeEEe
Confidence 998864 355543
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=1.5e-21 Score=172.60 Aligned_cols=264 Identities=11% Similarity=0.062 Sum_probs=180.2
Q ss_pred EEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecC--CeEEEEecCCceEE-Ee---eccEEEEeecCCCc
Q psy3710 57 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA--PVKGVRLRRDKIVV-VL---EGLIKVYTFIQCPQ 130 (424)
Q Consensus 57 ~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~-~~---~~~i~v~~~~~~~~ 130 (424)
+++.+++..+++.+ .+++|.+||..+++.+..+.... .+..++|+|++..+ ++ ++.|.+||+. +++
T Consensus 5 ~~~~~~~~~~v~~~-------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-t~~ 76 (349)
T 1jmx_B 5 PALKAGHEYMIVTN-------YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-TCK 76 (349)
T ss_dssp CCCCTTCEEEEEEE-------TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT-TTE
T ss_pred ccccCCCEEEEEeC-------CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC-CCc
Confidence 45566667777766 47999999999999988888655 78899999998643 33 6789999986 666
Q ss_pred eeEEEeeCCC----CCeeEEEeecCCCCeEEEeeccC------------CeEEEEeCCCCC--CCCcccccccCCeEEEE
Q psy3710 131 QLHVFETNPN----PKGLCVLCPNSNNSLLAFPGRKS------------GHVHLVDLADPE--RPPLDIAAHEAPLSCIA 192 (424)
Q Consensus 131 ~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~d------------g~i~i~d~~~~~--~~~~~~~~~~~~v~~~~ 192 (424)
....+..... ...+..++++|+++++++ ++.+ +.|.+||+.++. +.+..+ .+...+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~-~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~ 154 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYA-TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMR 154 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEE-EEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEE-EcccccccccccccCCCeEEEEECCCccccceeeec-cCCCccccee
Confidence 6666654321 112446789999999998 5544 899999998741 122222 2344688999
Q ss_pred EccCCCEEEEEecCCcEEEEEECCCcceeeEEecce---------------------------eeeeecCCCCeEEEEee
Q psy3710 193 LNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGL---------------------------CVLCPNSNNSLLAFPGR 245 (424)
Q Consensus 193 ~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 245 (424)
|+|+|+ ++++ ++. |.+||..+++.+..++.+. ..+++.+++........
T Consensus 155 ~s~dg~-l~~~--~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 155 AADDGS-LYVA--GPD-IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp ECTTSC-EEEE--SSS-EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred ECCCCc-EEEc--cCc-EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 999999 5554 456 9999999998877765331 11222222110000000
Q ss_pred cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEECCCCceeee-----------eccCCc
Q psy3710 246 KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTGSGQKLNE-----------LRRDSS 313 (424)
Q Consensus 246 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~~~~~~~~-----------~~~~~~ 313 (424)
....+..+|..+++.....+..+...+..++|+| ++++++++ ++. |.+||+.+++.+.. ++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANLDHTYYCVAFDKKGD 307 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEECSSCCCEEEECSSSS
T ss_pred cceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcCCCCccceEECCCCC
Confidence 1111222444444322223334666789999999 99999988 777 99999999887654 568899
Q ss_pred EEEEEeCCCcEEEEEccccccccc
Q psy3710 314 YLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 314 ~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
+|++++.++.|++||+.+++.+..
T Consensus 308 ~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEE
T ss_pred EEEEecCCCeEEEEeccccceeee
Confidence 888888899999999998776544
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=8.2e-21 Score=167.71 Aligned_cols=266 Identities=11% Similarity=0.075 Sum_probs=177.9
Q ss_pred CeEEEEeCCc--Ccccc-cccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE--EEEEe-ecCCeEE
Q psy3710 31 DGFRIYNCDP--LKEKE-RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV--VICLE-FNAPVKG 104 (424)
Q Consensus 31 ~~i~iw~~~~--~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~--~~~~~-~~~~v~~ 104 (424)
++|.+|+++. ++... ....+......++|+|+++ +++++... .++.|.+|++.+++. +..+. +...+..
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~----~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKED----DEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEET----TEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecC----CCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 3477777654 43322 1222456677899999999 66655310 258999999977663 33323 5778899
Q ss_pred EEecCCceEEEe----eccEEEEeecCCCce--eEEEeeCC-------CCCeeEEEeecCCCCeEEEeeccCCeEEEEeC
Q psy3710 105 VRLRRDKIVVVL----EGLIKVYTFIQCPQQ--LHVFETNP-------NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDL 171 (424)
Q Consensus 105 ~~~~~~~~~~~~----~~~i~v~~~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~ 171 (424)
++|+|++..+++ ++.+.+|++...+.. +..+.... ....+..++++|+++ +++++..++.|.+|++
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEE
Confidence 999999975554 578999999633332 22222211 112366789999999 5554778899999999
Q ss_pred CCCCCCCc--cccc-ccCCeEEEEEccCCCEEEEE-ecCCcEEEEEECCC--cce--eeEEec---------ceeeeeec
Q psy3710 172 ADPERPPL--DIAA-HEAPLSCIALNQTGTRLATA-SYKGTLIRVFDTGS--GQK--LNELRR---------GLCVLCPN 234 (424)
Q Consensus 172 ~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~~i~iwd~~~--~~~--~~~~~~---------~~~~~~~~ 234 (424)
........ .+.. ....+..++|+|+|++++++ ..++. |.+|++.. ++. +..+.. ....++++
T Consensus 170 ~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 170 SDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp CTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred CCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 83212211 1122 22357889999999976665 55677 99999874 432 222221 25568999
Q ss_pred CCCCeEEEEeecCCeEEEEeCCCCC--CCCeeeccCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEE--ECCCCce
Q psy3710 235 SNNSLLAFPGRKSGHVHLVDLADPE--RPPLDIAAHEAPLSCIALNQTGTRLATASYK-GTLIRVF--DTGSGQK 304 (424)
Q Consensus 235 ~~~~~~~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~~i~iw--d~~~~~~ 304 (424)
|+++.++++...++.|.+|++.... .....+..+...+..++|+|||++|++++.+ +. |.+| |..+++.
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~d~~tg~l 322 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN-ATLYARDLTSGKL 322 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc-EEEEEEeCCCCeE
Confidence 9999998888889999999997432 1233444556678999999999999888765 66 9999 4455544
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.5e-21 Score=172.54 Aligned_cols=274 Identities=10% Similarity=0.063 Sum_probs=182.5
Q ss_pred EEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccC-CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE
Q psy3710 15 YAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTD-GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV 92 (424)
Q Consensus 15 ~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~ 92 (424)
.++++++++++++++.++ |++||..+++.......+. .....++++|+++.++++... ++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCcE
Confidence 457888999899887777 9999999887755444432 256789999999887766643 68999999999998
Q ss_pred EEEEeecC-------CeEEEEecCCceEEEe---e------------ccEEEEeecCCCc---eeEEEeeCCCCCeeEEE
Q psy3710 93 VICLEFNA-------PVKGVRLRRDKIVVVL---E------------GLIKVYTFIQCPQ---QLHVFETNPNPKGLCVL 147 (424)
Q Consensus 93 ~~~~~~~~-------~v~~~~~~~~~~~~~~---~------------~~i~v~~~~~~~~---~~~~~~~~~~~~~~~~~ 147 (424)
+..+.... .+..++|+|++..++. + +.|.+||+. +++ .+..+..+ ..+.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~---~~~~~~ 153 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-DGLEAKPVRTFPMP---RQVYLM 153 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-GGGGBCCSEEEECC---SSCCCE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC-CccccceeeeccCC---Ccccce
Confidence 88777422 3788999999976654 4 899999986 432 22333332 245677
Q ss_pred eecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccccc---------------------C---CeEEEEEccCCCEEEEE
Q psy3710 148 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE---------------------A---PLSCIALNQTGTRLATA 203 (424)
Q Consensus 148 ~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------------~---~v~~~~~~~~~~~l~~~ 203 (424)
+++|+++ +++ ++. .|.+||+.++ +....+..+. . ....+++++++......
T Consensus 154 ~~s~dg~-l~~-~~~--~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 154 RAADDGS-LYV-AGP--DIYKMDVKTG-KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp EECTTSC-EEE-ESS--SEEEECTTTC-CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred eECCCCc-EEE-ccC--cEEEEeCCCC-ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 8999999 555 433 4999999876 3333332221 0 23456666554221111
Q ss_pred ecCCcEEEEEECCCcceeeE----EecceeeeeecC-CCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEc
Q psy3710 204 SYKGTLIRVFDTGSGQKLNE----LRRGLCVLCPNS-NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALN 278 (424)
Q Consensus 204 ~~d~~~i~iwd~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 278 (424)
......+..+|..+++.... .......++++| ++..++++ ++.|++||+.+++. ...+. ....+.+++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s 303 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKL-IKAAN-LDHTYYCVAFD 303 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEE-EEEEE-CSSCCCEEEEC
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeE-EEEEc-CCCCccceEEC
Confidence 11111022355554432111 112356788899 88887764 88999999988653 22332 33457899999
Q ss_pred CCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 279 QTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 279 ~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
|+|++|++++.++. |++||+++++.+..+.
T Consensus 304 ~dg~~l~~~~~~~~-v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 304 KKGDKLYLGGTFND-LAVFNPDTLEKVKNIK 333 (349)
T ss_dssp SSSSCEEEESBSSE-EEEEETTTTEEEEEEE
T ss_pred CCCCEEEEecCCCe-EEEEeccccceeeeee
Confidence 99999999888888 9999999998887765
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=2.8e-21 Score=173.47 Aligned_cols=277 Identities=11% Similarity=0.009 Sum_probs=189.2
Q ss_pred cccccCCceEE-----EEECCCCCeeEeecC-Ce---EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCC
Q psy3710 5 TSSTYKNGLLY-----AGFNQDQGCFACGME-DG---FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHP 75 (424)
Q Consensus 5 ~l~~h~~~V~~-----~~~s~~g~~la~g~~-~~---i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~ 75 (424)
.+..|...... .+|||||++|+.++. ++ |.+||+++++.......+...+....|+|+++.|++++
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~----- 99 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK----- 99 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE-----
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe-----
Confidence 46667666666 889999999997765 55 88889988877555555555555678999999999998
Q ss_pred CcCCCeEEEEECCCCcEEEEEeec-CCeEEE--EecCCceEEEe-------------------------eccEEEEeecC
Q psy3710 76 KYPNNRVMIWDDLKKQVVICLEFN-APVKGV--RLRRDKIVVVL-------------------------EGLIKVYTFIQ 127 (424)
Q Consensus 76 ~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~--~~~~~~~~~~~-------------------------~~~i~v~~~~~ 127 (424)
.++.|++||+.+++....+... ..+... .+++++..++. +..|.+||+.
T Consensus 100 --~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~- 176 (388)
T 3pe7_A 100 --DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK- 176 (388)
T ss_dssp --TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT-
T ss_pred --CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC-
Confidence 4689999999999887766643 334333 34888877752 2578889986
Q ss_pred CCceeEEEeeCCCCCeeEEEeecC-CCCeEEEeecc-----CCeEEEEeCCCCCCCCccccccc--CCeEEEEEccCCCE
Q psy3710 128 CPQQLHVFETNPNPKGLCVLCPNS-NNSLLAFPGRK-----SGHVHLVDLADPERPPLDIAAHE--APLSCIALNQTGTR 199 (424)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~ 199 (424)
+++.. .+..+. ..+..+.|+| +++.|+++... ...|.++|.... ....+..+. ..+..++|+|||+.
T Consensus 177 ~g~~~-~l~~~~--~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 177 TGEST-VILQEN--QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp TCCEE-EEEEES--SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCCCTTEEEEEEEECTTSSC
T ss_pred CCceE-EeecCC--ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeCCCCcccccceECCCCCE
Confidence 45433 333333 3367889999 99999873322 337888887753 334444444 35788999999998
Q ss_pred EEEEecC-----CcEEEEEECCCcceee--EEecc------eeeeeecCCCCeEEEEe--------ecCCeEEEEeCCCC
Q psy3710 200 LATASYK-----GTLIRVFDTGSGQKLN--ELRRG------LCVLCPNSNNSLLAFPG--------RKSGHVHLVDLADP 258 (424)
Q Consensus 200 l~~~~~d-----~~~i~iwd~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~--------~~dg~i~i~d~~~~ 258 (424)
|+..+.+ .. |++||+.+++... .++.. ....+++|++..++++. ..+..|++||+.++
T Consensus 252 l~~~~~~~~~~~~~-l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 252 LVYVSYLKGSPDRF-IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp EEEEEEETTCCCEE-EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTT
T ss_pred EEEEecCCCCCcce-EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 8665442 24 9999999887432 33321 12246899999888754 45679999999876
Q ss_pred CCCCeeeccCCC-----------CeEEEEEcCCCCEEEEEeC-CCcEEEEEE
Q psy3710 259 ERPPLDIAAHEA-----------PLSCIALNQTGTRLATASY-KGTLIRVFD 298 (424)
Q Consensus 259 ~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~~i~iwd 298 (424)
+. ..+..+.. .+.+++|+|||+.|+..+. ++. ..||.
T Consensus 331 ~~--~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~-~~l~~ 379 (388)
T 3pe7_A 331 TQ--HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGK-PALYL 379 (388)
T ss_dssp EE--EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSS-CEEEE
T ss_pred ce--EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCc-eeEEE
Confidence 52 33444554 5788899999998887664 554 55553
No 156
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=1.3e-20 Score=182.93 Aligned_cols=355 Identities=12% Similarity=0.044 Sum_probs=219.1
Q ss_pred CCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCC---Ce--eeEEEeccCceEEEEeCCcCC--CcCCCeE
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDG---GL--GHVEMLFRCNYLALVGGGTHP--KYPNNRV 82 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~---~i--~~~~~~~~~~~l~~~~~~~~~--~~~d~~i 82 (424)
.....+++|+|||++++++ ++.|++||+.+++.......+.. .+ ..+.|+||++++++.+..... ....+.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 3446689999999999987 44599999999887544443332 12 337899999999988842100 0012677
Q ss_pred EEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCC-----------------e
Q psy3710 83 MIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPK-----------------G 143 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~-----------------~ 143 (424)
.+||+.+++......+...+..++|||||..++. ++.|++|++. +++..+ +....... .
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP-NLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESST-TSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECC-CCceEE-EcCCCCccceecCcccccccchhcCC
Confidence 8999999886553346788999999999977775 8899999986 444322 21111111 1
Q ss_pred eEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCC---cc-
Q psy3710 144 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS---GQ- 219 (424)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~---~~- 219 (424)
...+.|||||+.|++....++.+.+|++....... .+...+..+.+.+.|... .... |++||+.+ ++
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~----~~~~~~~~~~yp~~G~~~----~~~~-l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES----LQYPKTVRVPYPKAGAVN----PTVK-FFVVNTDSLSSVTN 243 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT----CSSCEEEEEECCBTTSCC----CEEE-EEEEETTSCCSSSC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCC----CCCCcceeecCCCCcCcC----CeeE-EEEEECCCCCCCCc
Confidence 12478999999999844455558888875421111 345567788887777532 1225 99999998 73
Q ss_pred -eeeEEec------c---eeeeeecCCCCeEEEEeec---CCeEEEEeCCCCC----CC-Ceee--ccCCCCeE-----E
Q psy3710 220 -KLNELRR------G---LCVLCPNSNNSLLAFPGRK---SGHVHLVDLADPE----RP-PLDI--AAHEAPLS-----C 274 (424)
Q Consensus 220 -~~~~~~~------~---~~~~~~~~~~~~~~~~~~~---dg~i~i~d~~~~~----~~-~~~~--~~~~~~v~-----~ 274 (424)
....+.. + +..++|+|+++.+++.... +..|++||+.+++ +. ...+ ..|...+. .
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~ 323 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE 323 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCC
Confidence 2233332 1 5667899999866654332 3479999998876 11 1222 35665554 7
Q ss_pred EEEcCCCCEEE-EEeC-CCc-EEEEEECCCCceeee----------eccCCcEEEEEeCC-----C--cEEEEEcccccc
Q psy3710 275 IALNQTGTRLA-TASY-KGT-LIRVFDTGSGQKLNE----------LRRDSSYLCVSSDH-----G--TVHVFSVDEAQK 334 (424)
Q Consensus 275 ~~~~~~~~~l~-~~~~-d~~-~i~iwd~~~~~~~~~----------~~~~~~~l~~~~~d-----~--~i~iw~~~~~~~ 334 (424)
++|+|||+.|+ ..+. +|. .|.+||..+++.... +.++++.++..+.. + .|+..++..++.
T Consensus 324 p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~ 403 (740)
T 4a5s_A 324 PHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTK 403 (740)
T ss_dssp CEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEE
T ss_pred ceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCc
Confidence 89999999877 6654 332 188899887654331 22455555444332 2 344444443321
Q ss_pred ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEecc---CcEEEEEec
Q psy3710 335 INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICAD---GSYYKFMFN 394 (424)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d---g~v~~~~~~ 394 (424)
...+.. .. ...........|||++++++..... ..+.+++..
T Consensus 404 ~~~lt~--------~~----------~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 404 VTCLSC--------EL----------NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp EEESST--------TT----------STTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred ceeecc--------cc----------CCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 101100 00 0011235578999999987665443 256666654
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=2.6e-21 Score=187.78 Aligned_cols=305 Identities=12% Similarity=0.093 Sum_probs=197.9
Q ss_pred eeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecC----CeEEEEecCCceEEEe--e----------c
Q psy3710 55 GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA----PVKGVRLRRDKIVVVL--E----------G 118 (424)
Q Consensus 55 ~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~--~----------~ 118 (424)
..++|+|++.+++ .+ .|++|++||+.+++....+.+.. .+.+++|+||+..++. + +
T Consensus 19 ~~~~~s~dg~~~~-~~-------~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~ 90 (719)
T 1z68_A 19 FFPNWISGQEYLH-QS-------ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTA 90 (719)
T ss_dssp CCCEESSSSEEEE-EC-------TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred CccEECCCCeEEE-Ec-------CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecce
Confidence 3689999995443 33 37999999999999877776432 4899999999987764 3 7
Q ss_pred cEEEEeecCCCcee--EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc-ccccccCCe-------
Q psy3710 119 LIKVYTFIQCPQQL--HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL-DIAAHEAPL------- 188 (424)
Q Consensus 119 ~i~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v------- 188 (424)
.|++||+. +++.+ ..+. ..+..++|+|||+.|++ + .++.|++|++.++. ... ...++...|
T Consensus 91 ~i~~~d~~-~g~~~~~~~l~-----~~~~~~~~SPDG~~la~-~-~~~~i~~~~~~~g~-~~~l~~~~~~~~v~~g~~~~ 161 (719)
T 1z68_A 91 TYYIYDLS-NGEFVRGNELP-----RPIQYLCWSPVGSKLAY-V-YQNNIYLKQRPGDP-PFQITFNGRENKIFNGIPDW 161 (719)
T ss_dssp EEEEEETT-TTEECCSSCCC-----SSBCCEEECSSTTCEEE-E-ETTEEEEESSTTSC-CEECCCCCBTTTEEESSCCH
T ss_pred EEEEEECC-CCccccceecC-----cccccceECCCCCEEEE-E-ECCeEEEEeCCCCC-cEEEecCCCcCCeEcccccc
Confidence 89999986 55442 1121 23567899999999998 5 47899999998763 222 122333222
Q ss_pred ----------EEEEEccCCCEEEEEecCC----------------------------------cEEEEEECCCccee--e
Q psy3710 189 ----------SCIALNQTGTRLATASYKG----------------------------------TLIRVFDTGSGQKL--N 222 (424)
Q Consensus 189 ----------~~~~~~~~~~~l~~~~~d~----------------------------------~~i~iwd~~~~~~~--~ 222 (424)
.+++|+|||++|++++.|. . |++||+.+++.. .
T Consensus 162 v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~-l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 162 VYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVR-IFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEE-EEEEESSCHHHHCCE
T ss_pred eeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeE-EEEEECCCCCcccee
Confidence 4899999999999988652 5 899999888653 1
Q ss_pred EEe------c---ceeeeeecCCCCeEEEEeecC----CeEEEEe----CCCCCCCCeee----ccCCCCeE-----EEE
Q psy3710 223 ELR------R---GLCVLCPNSNNSLLAFPGRKS----GHVHLVD----LADPERPPLDI----AAHEAPLS-----CIA 276 (424)
Q Consensus 223 ~~~------~---~~~~~~~~~~~~~~~~~~~~d----g~i~i~d----~~~~~~~~~~~----~~~~~~v~-----~~~ 276 (424)
.+. . .+..++|+|++ .++++.... ..|++|| +.+++.. ..+ ..|...+. .++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 318 (719)
T 1z68_A 241 EVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPV 318 (719)
T ss_dssp ECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCE
T ss_pred EccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccE
Confidence 221 1 25678899995 455544332 3588899 7665532 233 36777776 889
Q ss_pred EcCCCCEEEE--EeCCCcE-EEEEECCCCceee-----------eeccCCcEEEEEeCC-----CcEEEEEccc--ccc-
Q psy3710 277 LNQTGTRLAT--ASYKGTL-IRVFDTGSGQKLN-----------ELRRDSSYLCVSSDH-----GTVHVFSVDE--AQK- 334 (424)
Q Consensus 277 ~~~~~~~l~~--~~~d~~~-i~iwd~~~~~~~~-----------~~~~~~~~l~~~~~d-----~~i~iw~~~~--~~~- 334 (424)
|+|||+.|+. ...++.. |.+||+.+++... .+. +++.++..+.+ +..++|.+.. +..
T Consensus 319 ~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~ 397 (719)
T 1z68_A 319 FSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS 397 (719)
T ss_dssp ECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC
T ss_pred ECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC
Confidence 9999996654 4445531 7777877654211 122 56666655544 7788888764 210
Q ss_pred ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEE-ecc--CcEEEEEecCCcce
Q psy3710 335 INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVI-CAD--GSYYKFMFNSKGEC 399 (424)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~d--g~v~~~~~~~~~~~ 399 (424)
...+.. . +..+...+..+.|+||+++++.. +.+ ..+++|++. ++++
T Consensus 398 ~~~l~~--------~----------~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~-~g~~ 446 (719)
T 1z68_A 398 KKCVTC--------H----------LRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR-TDQE 446 (719)
T ss_dssp EEESST--------T----------TTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS-SCCE
T ss_pred ceeccC--------c----------cCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC-CCCE
Confidence 111000 0 00012235578899999988754 333 367888875 4443
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=7.8e-20 Score=162.34 Aligned_cols=258 Identities=16% Similarity=0.135 Sum_probs=172.8
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC----CeEEEEeCCCCCCCC---cccccccCCeE
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS----GHVHLVDLADPERPP---LDIAAHEAPLS 189 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d----g~i~i~d~~~~~~~~---~~~~~~~~~v~ 189 (424)
++.|.+|.+......+..+... .......++++|++++|++ ++.+ +.|.+|++....... .....+.....
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~-~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYS-VNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEE-EECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEE-EEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 5689999885332222222111 2233455789999999988 5554 899999987631111 22333455677
Q ss_pred EEEEccCCCEEEEEe-cCCcEEEEEECCCcceeeEE----e-------------cceeeeeecCCCCeEEEEeecCCeEE
Q psy3710 190 CIALNQTGTRLATAS-YKGTLIRVFDTGSGQKLNEL----R-------------RGLCVLCPNSNNSLLAFPGRKSGHVH 251 (424)
Q Consensus 190 ~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~~~~~----~-------------~~~~~~~~~~~~~~~~~~~~~dg~i~ 251 (424)
.+++ ++++|++++ .++. |.+|++.....+..+ . .+...++++|+++.+++++..++.|+
T Consensus 104 ~~~~--dg~~l~~~~~~~~~-v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 104 YLTT--NGKNIVTANYSGGS-ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEE--CSSEEEEEETTTTE-EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEE--CCCEEEEEECCCCE-EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 7887 788777776 5677 999999754332211 1 11356899999999988787899999
Q ss_pred EEeCCCCCC------C------CeeeccCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCCCcee-------------
Q psy3710 252 LVDLADPER------P------PLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQKL------------- 305 (424)
Q Consensus 252 i~d~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~~------------- 305 (424)
+|++..... . ......+...+..++|+|||+++++++ .++. |.+|++.+++..
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g~~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADGMLDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETTEEEEEEEEESCSSCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCCceEEeEEEecCCCCCC
Confidence 999886542 1 111224456688999999999888877 5777 999999876431
Q ss_pred ----eeeccCCcEEEEEeCC--CcEEEEEcc--ccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC
Q psy3710 306 ----NELRRDSSYLCVSSDH--GTVHVFSVD--EAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN 377 (424)
Q Consensus 306 ----~~~~~~~~~l~~~~~d--~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 377 (424)
..|+|+|++|+++..+ +.|.+|++. +++. ... ..+.. ...+..++|+|||+
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~-~~~-------------------~~~~~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTL-TKV-------------------GYQLT-GIHPRNFIITPNGK 318 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCE-EEE-------------------EEEEC-SSCCCEEEECTTSC
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcE-EEe-------------------eEecC-CCCCceEEECCCCC
Confidence 1377999998776654 899999996 3321 110 01111 23456899999999
Q ss_pred eEEEEe-ccCcEEEEEecC-Ccceee
Q psy3710 378 SIIVIC-ADGSYYKFMFNS-KGECWR 401 (424)
Q Consensus 378 ~l~~~~-~dg~v~~~~~~~-~~~~~~ 401 (424)
+|++++ .++.|.+|+++. ++++..
T Consensus 319 ~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 319 YLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEEECCCCCEEEEEEECCCCcEee
Confidence 999888 578999998874 454433
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=2.5e-21 Score=183.20 Aligned_cols=258 Identities=14% Similarity=0.102 Sum_probs=186.1
Q ss_pred cCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec-CCeEEEEecCCceEEEe-e-----ccEEE
Q psy3710 50 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN-APVKGVRLRRDKIVVVL-E-----GLIKV 122 (424)
Q Consensus 50 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~-~-----~~i~v 122 (424)
+..++..+.++||++.+++++.. |++++||++.+++..+...+. ..+..++|+|| .++++ + ....+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~------~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFS------EGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEE------TTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEcc------CCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEE
Confidence 35679999999999999998842 799999999666655444455 58999999999 55553 3 35677
Q ss_pred EeecC--CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEE
Q psy3710 123 YTFIQ--CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL 200 (424)
Q Consensus 123 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 200 (424)
|.+.. .+... .+.... . ....+++|+++.++.+...++.+.+||+.++ + ...+..+.. .+++|+|||++|
T Consensus 93 ~~~~~~~~g~~~-~l~~~~-~--~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g-~-~~~l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEAVK-P--MRILSGVDTGEAVVFTGATEDRVALYALDGG-G-LRELARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp EEEETTSTTCCE-ECTTSC-S--BEEEEEEECSSCEEEEEECSSCEEEEEEETT-E-EEEEEEESS--CEEEEEEETTEE
T ss_pred EEEeccCCCccc-cccCCC-C--ceeeeeCCCCCeEEEEecCCCCceEEEccCC-c-EEEeecCCC--ceEEECCCCCEE
Confidence 76653 33332 232222 2 2345677777654433455555669999875 3 233333333 899999999999
Q ss_pred EEEecC----CcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCC--eEEEEeCCCCCCCCeeeccCCCC
Q psy3710 201 ATASYK----GTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSG--HVHLVDLADPERPPLDIAAHEAP 271 (424)
Q Consensus 201 ~~~~~d----~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~ 271 (424)
++++.+ .. |++||+.+++.. .+..+ ....+|+|+|+.++ ++..++ .|++||+.+++.. .+..|...
T Consensus 165 a~~~~~~~~~~~-i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~ 239 (582)
T 3o4h_A 165 AGLGFFGGGRVS-LFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGSVE--DLELPSKD 239 (582)
T ss_dssp EEEEEEETTEEE-EEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCCEE--ECCCSCSH
T ss_pred EEEEEcCCCCeE-EEEEcCCCCCce-EeecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCcEE--EccCCCcC
Confidence 988877 77 999999888755 34332 57789999999988 577788 8999999887643 55677777
Q ss_pred eEEEE--------EcCCCCEEEEEeCCCcEEEEEECCCCceee---------eeccCCcEEEEEeCCCc---EEEEEccc
Q psy3710 272 LSCIA--------LNQTGTRLATASYKGTLIRVFDTGSGQKLN---------ELRRDSSYLCVSSDHGT---VHVFSVDE 331 (424)
Q Consensus 272 v~~~~--------~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~---------~~~~~~~~l~~~~~d~~---i~iw~~~~ 331 (424)
+..++ |+|||.++++++.++. +++|++ |+.+. .++ +++++++++.+.. +++|+..+
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGR-SAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTE-EEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCc-EEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 77777 9999999999999999 999999 65442 356 8888888877743 66666654
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1.7e-19 Score=160.17 Aligned_cols=265 Identities=12% Similarity=0.049 Sum_probs=173.4
Q ss_pred eEEEEeCC--cCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC--CcEEE--EEe-ecCCeEE
Q psy3710 32 GFRIYNCD--PLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK--KQVVI--CLE-FNAPVKG 104 (424)
Q Consensus 32 ~i~iw~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~--~~~~~--~~~-~~~~v~~ 104 (424)
+|.+|.++ +++.......+......++|+|+++++++++... ..++.+.+|++.. ++... ... +...+..
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred CEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 48888764 4444222222566778899999999999888420 0137999998765 44322 233 3456777
Q ss_pred EEecCCce-EEEe---eccEEEEeecCCCcee--EEEeeCCC---------CCeeEEEeecCCCCeEEEeeccCCeEEEE
Q psy3710 105 VRLRRDKI-VVVL---EGLIKVYTFIQCPQQL--HVFETNPN---------PKGLCVLCPNSNNSLLAFPGRKSGHVHLV 169 (424)
Q Consensus 105 ~~~~~~~~-~~~~---~~~i~v~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~dg~i~i~ 169 (424)
+++ ++. ++++ ++.|.+|++...+... .....+.. ...+..++++|+++++++++..++.|.+|
T Consensus 105 ~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 105 LTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 888 443 3333 6799999996333221 11111111 12246789999999887756678999999
Q ss_pred eCCCCCC----C-C-------cccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcce--eeEEecc------e
Q psy3710 170 DLADPER----P-P-------LDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQK--LNELRRG------L 228 (424)
Q Consensus 170 d~~~~~~----~-~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~--~~~~~~~------~ 228 (424)
++..... . + .....+...+..++|+|+|+++++++ .++. |.+||+.+++. +..+... .
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCCceEEeEEEecCCCCCCCc
Confidence 9886432 1 1 11223345678999999999888777 5788 99999987654 2333221 3
Q ss_pred eeeeecCCCCeEEEEeec-CCeEEEEeCCC--CCC-CCeeeccCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEE--CCC
Q psy3710 229 CVLCPNSNNSLLAFPGRK-SGHVHLVDLAD--PER-PPLDIAAHEAPLSCIALNQTGTRLATASY-KGTLIRVFD--TGS 301 (424)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~-dg~i~i~d~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd--~~~ 301 (424)
..++++|+++.++++... ++.|.+|++.. +.. ....+.. ...+.+++|+|||++|++++. ++. |.+|+ ..+
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~-v~v~~~d~~~ 339 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNV-IQIFERDQAT 339 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTE-EEEEEECTTT
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCC-EEEEEEECCC
Confidence 478999999998887766 79999999963 221 1222323 457789999999998888874 566 88854 445
Q ss_pred Cce
Q psy3710 302 GQK 304 (424)
Q Consensus 302 ~~~ 304 (424)
++.
T Consensus 340 g~~ 342 (361)
T 3scy_A 340 GLL 342 (361)
T ss_dssp CCE
T ss_pred CcE
Confidence 543
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=5.9e-20 Score=164.81 Aligned_cols=318 Identities=11% Similarity=0.015 Sum_probs=186.8
Q ss_pred EEeCCcCcccccccccCCCeee-----EEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEee-cCCeEEEEec
Q psy3710 35 IYNCDPLKEKERQDFTDGGLGH-----VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLR 108 (424)
Q Consensus 35 iw~~~~~~~~~~~~~~~~~i~~-----~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~ 108 (424)
.++..++........+...... .+|+|+++++++++... ....|.+||+.+++....... ...+..+.|+
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~----g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~s 89 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD----GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLS 89 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT----SSCEEEEEETTTCEEEECCCSSCBCSSSCEEC
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC----CCceEEEEeCCCCceEEeeeCCCCCccceEEc
Confidence 3455555554444444444444 78999999999998421 122699999998887765553 3344467899
Q ss_pred CCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe---------------------eccCC
Q psy3710 109 RDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP---------------------GRKSG 164 (424)
Q Consensus 109 ~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------~~~dg 164 (424)
||+..++. ++.|++||+. +++.......+........+.++++++.++.. ...+.
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLA-TLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 99977765 5689999996 56555555544432222334458999988741 12347
Q ss_pred eEEEEeCCCCCCCCcccccccCCeEEEEEcc-CCCEEEEEecC------CcEEEEEECCCcceeeEEec----ceeeeee
Q psy3710 165 HVHLVDLADPERPPLDIAAHEAPLSCIALNQ-TGTRLATASYK------GTLIRVFDTGSGQKLNELRR----GLCVLCP 233 (424)
Q Consensus 165 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~~i~iwd~~~~~~~~~~~~----~~~~~~~ 233 (424)
.|.+||+.++ ....+..+...+..++|+| +|+.|+....+ .. |.++|...++....... .....+|
T Consensus 169 ~l~~~d~~~g--~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~-l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 169 RLMRVDLKTG--ESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDAR-MWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEETTTC--CEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCS-EEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred eEEEEECCCC--ceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcce-EEEEeCCCCceEEeeeCCCCcccccceE
Confidence 8999999875 3455556777899999999 99998887753 36 88888876543322222 1445689
Q ss_pred cCCCCeEEEEeecCC----eEEEEeCCCCCCCC-eeeccCCC---CeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee
Q psy3710 234 NSNNSLLAFPGRKSG----HVHLVDLADPERPP-LDIAAHEA---PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg----~i~i~d~~~~~~~~-~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 305 (424)
+|+++.+++.+..++ .|++||+.+++... ..+.++.. ....++|+|||+.|+....++.
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------------- 312 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDS------------- 312 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---------------------
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecc-------------
Confidence 999998887665543 39999998876311 11111000 0111256677666664432210
Q ss_pred eeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec-
Q psy3710 306 NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA- 384 (424)
Q Consensus 306 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~- 384 (424)
..+...+..|++||+.+++.. .+..... .|.... ......+..++|+|||++|++.+.
T Consensus 313 ---------~~~~~~~~~i~~~d~~~~~~~-~l~~~~~----------~~~~~~-~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 313 ---------GYKIENDPFLYVFNMKNGTQH-RVARHDT----------SWKVFE-GDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp -------------CCCCEEEEEETTTTEEE-EEEECCC----------CCCCBT-TBSSTTCCCCEECTTSSEEEEEECT
T ss_pred ---------ccccCCCCEEEEEeccCCceE-EeccccC----------cccccc-cccccCCCCccCCCCCCEEEEEecC
Confidence 001123445666666554321 1000000 000000 000012456799999998887664
Q ss_pred cCcEEEEEec
Q psy3710 385 DGSYYKFMFN 394 (424)
Q Consensus 385 dg~v~~~~~~ 394 (424)
+|...+|.++
T Consensus 372 ~g~~~l~~~~ 381 (388)
T 3pe7_A 372 HGKPALYLAT 381 (388)
T ss_dssp TSSCEEEEEE
T ss_pred CCceeEEEEE
Confidence 7877888775
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=1.9e-19 Score=174.82 Aligned_cols=289 Identities=10% Similarity=0.071 Sum_probs=192.6
Q ss_pred CCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCC-Cee--EEEeecCCCCeEEEeeccC---------CeE
Q psy3710 100 APVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNP-KGL--CVLCPNSNNSLLAFPGRKS---------GHV 166 (424)
Q Consensus 100 ~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~~~~d---------g~i 166 (424)
....++.|+||+.++++ ++.|++||+. +++....+..+... ..+ ..+.+||||++|++ ++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~-~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQENNILVFNAE-YGNSSVFLENSTFDEFGHSINDYSISPDGQFILL-EYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEETTEEEEEETT-TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEE-EEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEcCCcEEEEECC-CCceEEEEechhhhhhcccccceEECCCCCEEEE-EECCeeeEEEccceEE
Confidence 34668999999988887 8999999996 66666666665432 112 23788999999998 6655 667
Q ss_pred EEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe-cc------------------
Q psy3710 167 HLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-RG------------------ 227 (424)
Q Consensus 167 ~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-~~------------------ 227 (424)
.+||+.++ + ...+..|...+...+|||||+.|+.+. ++. |++||+.+++..+... +.
T Consensus 95 ~~~d~~~~-~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~-i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 95 DIYDLNKR-Q-LITEERIPNNTQWVTWSPVGHKLAYVW-NND-IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEETTTT-E-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTE-EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEECCCC-c-EEEcccCCCcceeeEECCCCCEEEEEE-CCe-EEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 89999985 2 345667788899999999999999885 677 9999998876543211 11
Q ss_pred --eeeeeecCCCCeEEEEeecCC-----------------------------------eEEEEeCCC---CCC-CCeeec
Q psy3710 228 --LCVLCPNSNNSLLAFPGRKSG-----------------------------------HVHLVDLAD---PER-PPLDIA 266 (424)
Q Consensus 228 --~~~~~~~~~~~~~~~~~~~dg-----------------------------------~i~i~d~~~---~~~-~~~~~~ 266 (424)
...+.|+|+|+.+++....++ .|++||+.+ ++. ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 123789999999998643322 588899988 632 122222
Q ss_pred ------cCCCCeEEEEEcCCCCEEEEEeC----CCcEEEEEECCCCc-------ee------------------eeeccC
Q psy3710 267 ------AHEAPLSCIALNQTGTRLATASY----KGTLIRVFDTGSGQ-------KL------------------NELRRD 311 (424)
Q Consensus 267 ------~~~~~v~~~~~~~~~~~l~~~~~----d~~~i~iwd~~~~~-------~~------------------~~~~~~ 311 (424)
+|...+..++|+|||+.++.... +.. |++||+.+++ .. -.|+||
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 37788999999999997666543 235 9999998876 11 146789
Q ss_pred CcEEE-EEeC-C--CcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEecc--
Q psy3710 312 SSYLC-VSSD-H--GTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICAD-- 385 (424)
Q Consensus 312 ~~~l~-~~~~-d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d-- 385 (424)
|+.++ ..+. + ..|++|++.+++...- . .+.|. +.. .+.+|++.|+..+..
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~~~l-T------------~g~~~----------v~~-~~~~d~~~i~f~~~~~~ 385 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDCTFI-T------------KGTWE----------VIG-IEALTSDYLYYISNEYK 385 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSCEES-C------------CSSSC----------EEE-EEEECSSEEEEEESCGG
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCceEec-c------------cCCEE----------EEE-EEEEeCCEEEEEEecCC
Confidence 99877 6653 3 4678888876543211 1 11222 112 123556766655443
Q ss_pred ---CcEEEEEecCCcceee---e-------eehhhheecCCCceeeE
Q psy3710 386 ---GSYYKFMFNSKGECWR---D-------VYIQFLEMTNDSNLLSC 419 (424)
Q Consensus 386 ---g~v~~~~~~~~~~~~~---~-------~~~~~~~~~~d~~~l~~ 419 (424)
+...+|.++..+...+ + .......++||+++++.
T Consensus 386 ~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 386 GMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp GCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred CCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 4567776664432211 1 12334678999998764
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.9e-19 Score=163.00 Aligned_cols=198 Identities=11% Similarity=0.121 Sum_probs=136.5
Q ss_pred EeecCCeEEEEecCCceEEE----e---eccEEEEeecCC-----C--ce---eEEEeeCCCCCeeEEEeecCC-CCeEE
Q psy3710 96 LEFNAPVKGVRLRRDKIVVV----L---EGLIKVYTFIQC-----P--QQ---LHVFETNPNPKGLCVLCPNSN-NSLLA 157 (424)
Q Consensus 96 ~~~~~~v~~~~~~~~~~~~~----~---~~~i~v~~~~~~-----~--~~---~~~~~~~~~~~~~~~~~~~~~-~~~l~ 157 (424)
+.+...|.+++|+|++.+++ + |+.|++||+... . +. +..+..|. ..+.+++|+|+ +.+|+
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG--GMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG--GSEEEEEECSSCTTEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC--CceEEEEECCCCCCEEE
Confidence 34567789999999987777 4 889999988521 0 22 22233344 45889999998 67777
Q ss_pred EeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec----------c
Q psy3710 158 FPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR----------G 227 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~----------~ 227 (424)
+ ++.||.|++||++++ .......+|...|.+++|+|+|++|++++.|+. |++||++ ++....+.. .
T Consensus 167 s-~s~Dg~v~iwD~~~~-~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 167 V-CLADGSIAVLQVTET-VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp E-EETTSCEEEEEESSS-EEEEEEECGGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEECCCTTCCTTSCEE
T ss_pred E-EECCCeEEEEEcCCC-cceeeccCCCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-CcccccccCCcccCCCCcee
Confidence 7 999999999999986 444455678899999999999999999999999 9999998 555544432 3
Q ss_pred eeeeeecCCCCeEEEEeecCC------eEEEEeCCCCCCC-Ceeec----------cCCCCeEEEEEcCCCCEEEEEeCC
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSG------HVHLVDLADPERP-PLDIA----------AHEAPLSCIALNQTGTRLATASYK 290 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg------~i~i~d~~~~~~~-~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d 290 (424)
+..+++++++..+++....+| .+++|++++.+.. ...+. ....+-..+.+-++.+++++++..
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~ 322 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAA 322 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETT
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCC
Confidence 556788887777766666654 3899999865321 11111 222233334444777777766654
Q ss_pred CcEEEEEEC
Q psy3710 291 GTLIRVFDT 299 (424)
Q Consensus 291 ~~~i~iwd~ 299 (424)
...|.+...
T Consensus 323 s~dv~vl~~ 331 (434)
T 2oit_A 323 STEVSILAR 331 (434)
T ss_dssp CSBCEEEEE
T ss_pred CCceeEEEe
Confidence 433666654
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=1.3e-19 Score=163.06 Aligned_cols=313 Identities=12% Similarity=0.045 Sum_probs=196.1
Q ss_pred EEeCCcCcccccccccCC-----CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeE-EEEec
Q psy3710 35 IYNCDPLKEKERQDFTDG-----GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVK-GVRLR 108 (424)
Q Consensus 35 iw~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~-~~~~~ 108 (424)
..|..+++.......+.. .+..++|+|+++.++++.... .+..|.+||+.+++............ .+.|+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~----g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s 89 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFD----GNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS 89 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT----SSCEEEEEETTTTEEEECCCSSCBCTTTCEEC
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecC----CCceEEEEECCCCcEEEeecCCCCccccceEC
Confidence 335566554333333222 266789999999998887431 24589999998887654433333333 37899
Q ss_pred CCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccccc
Q psy3710 109 RDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE 185 (424)
Q Consensus 109 ~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 185 (424)
||+..++. ++.|++|++. .++.......+.. ++++++.|+. ...++...+|..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~-~~~~~~~~~~~~~--------~~~~g~~l~~-~~~~~~~~~~~~-------------- 145 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLE-TLEEQVIYTVDEE--------WKGYGTWVAN-SDCTKLVGIEIL-------------- 145 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETT-TCCEEEEEECCTT--------EEEEEEEEEC-TTSSEEEEEEEE--------------
T ss_pred CCCCEEEEEEcCCcEEEEECC-CCCcEEEEecccc--------cCCCCCEEEe-ccCCcccccccc--------------
Confidence 99977765 5679999986 5554443333321 5567777877 666555554431
Q ss_pred CCeEEEEEccCCCEEEEE-----ecCCcEEEEEECCCcceeeEEec--ceeeeeecC-CCCeEEEEeecC-----CeEEE
Q psy3710 186 APLSCIALNQTGTRLATA-----SYKGTLIRVFDTGSGQKLNELRR--GLCVLCPNS-NNSLLAFPGRKS-----GHVHL 252 (424)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~-----~~d~~~i~iwd~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~d-----g~i~i 252 (424)
.+.|+|+++.++.. ..+.. |++||+.+++....... .+..+.++| ++..+++..... ..|.+
T Consensus 146 ----~~~~spdg~~~~~~~~~~~~~~~~-l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (396)
T 3c5m_A 146 ----KRDWQPLTSWEKFAEFYHTNPTCR-LIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 220 (396)
T ss_dssp ----GGGCCCCCSHHHHHHHHHTCCCEE-EEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEE
T ss_pred ----ccccCCCCcceeeeeeccCCCcce-EEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEE
Confidence 23467888877654 34556 99999988876544432 356778999 677777654322 46899
Q ss_pred EeCCCCCCCCeeeccC--CCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEECCCCceee---------eecc-CCcEE
Q psy3710 253 VDLADPERPPLDIAAH--EAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQKLN---------ELRR-DSSYL 315 (424)
Q Consensus 253 ~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~~~~---------~~~~-~~~~l 315 (424)
||+..... ..+..+ ...+..++|+|||++|+.++.+ +. |++||+.+++... .++| +|+++
T Consensus 221 ~d~~~~~~--~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l 297 (396)
T 3c5m_A 221 VNEDGSNV--RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV-IYKANPETLENEEVMVMPPCSHLMSNFDGSLM 297 (396)
T ss_dssp EETTSCCC--EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE-EEEECTTTCCEEEEEECCSEEEEEECSSSSEE
T ss_pred EECCCCce--eEeeccCCCccccceEECCCCCEEEEEecCCCCccce-EEEEECCCCCeEEeeeCCCCCCCccCCCCceE
Confidence 99876442 222222 2357889999999988877654 55 9999998875432 4678 99988
Q ss_pred EEEe----------------CCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeE
Q psy3710 316 CVSS----------------DHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSI 379 (424)
Q Consensus 316 ~~~~----------------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 379 (424)
++++ .+..|++||+.+++.. .+..... .|.... ..........+|+|||++|
T Consensus 298 ~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~----------~~~~~~-~~~~~~~~~~~~s~dg~~l 365 (396)
T 3c5m_A 298 VGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHST----------SWDVLD-GDRQITHPHPSFTPNDDGV 365 (396)
T ss_dssp EEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCC----------CCCCBT-TBSSTTCCCCEECTTSSEE
T ss_pred EEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCC----------cccccc-ccccCCCCCceEccCCCeE
Confidence 8765 3478999999876531 1111000 000000 0000013456899999998
Q ss_pred EEEec-cCcEEEEEecC
Q psy3710 380 IVICA-DGSYYKFMFNS 395 (424)
Q Consensus 380 ~~~~~-dg~v~~~~~~~ 395 (424)
++++. ++...+|.++.
T Consensus 366 ~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 366 LFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEEECTTSSCEEEEEEC
T ss_pred EEEecCCCCceEEEEEE
Confidence 87765 56667776653
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1e-18 Score=155.23 Aligned_cols=260 Identities=8% Similarity=0.014 Sum_probs=173.6
Q ss_pred eEEEEeCC--cCccccccc---ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC-CCcEEEEEeec--CCeE
Q psy3710 32 GFRIYNCD--PLKEKERQD---FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL-KKQVVICLEFN--APVK 103 (424)
Q Consensus 32 ~i~iw~~~--~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~-~~~~~~~~~~~--~~v~ 103 (424)
+|.+|+++ +++...... .....+..++++|+++++++++ .+ .|.+|++. +++......+. +.+.
T Consensus 15 ~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~-------~~-~v~~~~~~~~g~~~~~~~~~~~g~~~ 86 (365)
T 1jof_A 15 AIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA-------MK-KWSSFAVKSPTEIVHEASHPIGGHPR 86 (365)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE-------BT-EEEEEEEEETTEEEEEEEEECCSSGG
T ss_pred cEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc-------cc-eEEEEEECCCCCEEEeeEeecCCCCc
Confidence 47777653 444322111 1234677899999999988777 34 99999987 77765544432 4466
Q ss_pred EEEecCCceE--EE----------------eeccEEEEeecCCCceeEEEee--CCCCCeeEEEeecCCCCeEEEeeccC
Q psy3710 104 GVRLRRDKIV--VV----------------LEGLIKVYTFIQCPQQLHVFET--NPNPKGLCVLCPNSNNSLLAFPGRKS 163 (424)
Q Consensus 104 ~~~~~~~~~~--~~----------------~~~~i~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~d 163 (424)
.++++|++.. ++ .++.+.+|++...++....+.. +.....+..++++|+|++++++...+
T Consensus 87 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~ 166 (365)
T 1jof_A 87 ANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA 166 (365)
T ss_dssp GGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC
Confidence 7899999973 32 2467999999644554443332 12234577889999999888744457
Q ss_pred CeEEEEeCC-CCCCCC--cccc--cccCCeEEEEEccCCCEEEEEec-CCcEEEEEECC--Ccceee---EEe---c---
Q psy3710 164 GHVHLVDLA-DPERPP--LDIA--AHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTG--SGQKLN---ELR---R--- 226 (424)
Q Consensus 164 g~i~i~d~~-~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~--~~~~~~---~~~---~--- 226 (424)
+.|.+||+. ++ +.. ..+. .|...+..++|+|+|+++++++. ++. |.+|++. +++... .+. .
T Consensus 167 ~~v~~~~~~~~g-~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 167 NKLWTHRKLASG-EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TEEEEEEECTTS-CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CEEEEEEECCCC-CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 899999998 54 221 1222 23567899999999999988775 577 9999765 455421 221 1
Q ss_pred ----------ceeeee-ecCCCCeEEEEeecCC-----eEEEEeCCCCCCCCe---eeccCCCCeEEEEEcC---CCCEE
Q psy3710 227 ----------GLCVLC-PNSNNSLLAFPGRKSG-----HVHLVDLADPERPPL---DIAAHEAPLSCIALNQ---TGTRL 284 (424)
Q Consensus 227 ----------~~~~~~-~~~~~~~~~~~~~~dg-----~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~~l 284 (424)
....++ ++|+++.++++...++ .|.+|++........ ....+...+..++|+| ||++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 245678 9999998877655444 899999963222221 1223455567889999 78888
Q ss_pred EEEeCC-CcEEEEEECCCC
Q psy3710 285 ATASYK-GTLIRVFDTGSG 302 (424)
Q Consensus 285 ~~~~~d-~~~i~iwd~~~~ 302 (424)
++++.+ +. |++|++...
T Consensus 325 ~v~~~~~~~-v~v~~~~~~ 342 (365)
T 1jof_A 325 AITDDQEGW-LEIYRWKDE 342 (365)
T ss_dssp EEECSSSCE-EEEEEEETT
T ss_pred EEEEcCCCe-EEEEEEchh
Confidence 888765 66 888887654
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=8.3e-19 Score=155.02 Aligned_cols=263 Identities=13% Similarity=0.138 Sum_probs=180.3
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec----------cCCeEEEEeCCCCCCCCccccc---
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR----------KSGHVHLVDLADPERPPLDIAA--- 183 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------~dg~i~i~d~~~~~~~~~~~~~--- 183 (424)
|+.|.+||.. +++.+..+..... . .++++||++++++ +. .++.|.+||..+. +.+..+..
T Consensus 30 d~~v~v~D~~-t~~~~~~i~~g~~---p-~i~~spdg~~lyv-~~~~~~~~~~g~~~~~v~v~d~~t~-~~~~~i~~~~~ 102 (361)
T 2oiz_A 30 ESRVHVYDYT-NGKFLGMVPTAFN---G-HVQVSNDGKKIYT-MTTYHERITRGKRSDVVEVWDADKL-TFEKEISLPPK 102 (361)
T ss_dssp GCEEEEEETT-TCCEEEEEECCEE---E-EEEECTTSSEEEE-EEEEETTSSSSCEEEEEEEEETTTC-CEEEEEEECTT
T ss_pred cCeEEEEECC-CCeEEEEecCCCC---C-ceEECCCCCEEEE-EEecccccccCCCCCEEEEEECcCC-cEEEEEEcCcc
Confidence 3466777764 5555555554322 2 6799999999998 43 3678999999875 44444432
Q ss_pred ---ccCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeE-Eecc-eeeeeecCCCCeEEEEeecCCeEEEEeCC
Q psy3710 184 ---HEAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNE-LRRG-LCVLCPNSNNSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 184 ---~~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 256 (424)
+......++++|+|++|+++.. ++. |.+||+.+++.+.. +..+ ...+.+.|.+...+++.+.||.+.+++..
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~~~~~-v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNASPATS-IGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLG 181 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEESSSEE-EEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEEC
T ss_pred ccccCCCcceEEECCCCCEEEEECCCCCCe-EEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEEC
Confidence 2345678999999999998875 467 99999999988877 5543 22245677776677778899999999986
Q ss_pred CCCCCC------eeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce------------------------ee
Q psy3710 257 DPERPP------LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------------------------LN 306 (424)
Q Consensus 257 ~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------------------------~~ 306 (424)
...... ..+..+..++ .+.++|++..++..+.++. |.++|+..+.. ..
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCe-EEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 533222 1112222222 3344677888888888888 99999864321 12
Q ss_pred eeccCCcEEEEEeC-----------CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecC
Q psy3710 307 ELRRDSSYLCVSSD-----------HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGAD 375 (424)
Q Consensus 307 ~~~~~~~~l~~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 375 (424)
.++|+++.+.++.. .+.|.+||+.+++.+.++. .+. ...++|+||
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~----------------------~~~--p~~ia~spd 315 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP----------------------GRD--ALSMTIDQQ 315 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE----------------------CTT--CCEEEEETT
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe----------------------cCC--eeEEEECCC
Confidence 46778777766543 3479999999977654422 222 568999999
Q ss_pred CCeEEEEeccCcEEEEEecCCc--ceeeee-----ehhhheecCCCc
Q psy3710 376 SNSIIVICADGSYYKFMFNSKG--ECWRDV-----YIQFLEMTNDSN 415 (424)
Q Consensus 376 ~~~l~~~~~dg~v~~~~~~~~~--~~~~~~-----~~~~~~~~~d~~ 415 (424)
|++|++++. +.|.+||.. ++ ++++.. .-..+.++|||.
T Consensus 316 g~~l~v~n~-~~v~v~D~~-t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 316 RNLMLTLDG-GNVNVYDIS-QPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEECS-SCEEEEECS-SSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCEEEEeCC-CeEEEEECC-CCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999998886 999999987 56 555542 124567888885
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=8.1e-19 Score=155.84 Aligned_cols=254 Identities=11% Similarity=0.077 Sum_probs=166.5
Q ss_pred ccEEEEeecCCCceeEEEeeC--CCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCC-CCCCCCccccccc--CCeEEEE
Q psy3710 118 GLIKVYTFIQCPQQLHVFETN--PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA-DPERPPLDIAAHE--APLSCIA 192 (424)
Q Consensus 118 ~~i~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~-~~~~~~~~~~~~~--~~v~~~~ 192 (424)
+.|.+|++......+..+... ........++++|++++|++ ++.+ .|.+|++. ++ +..... .+. +.+..++
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~-~~~~-~v~~~~~~~~g-~~~~~~-~~~~~g~~~~~~ 89 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYG-AAMK-KWSSFAVKSPT-EIVHEA-SHPIGGHPRAND 89 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEE-EEBT-EEEEEEEEETT-EEEEEE-EEECCSSGGGGC
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEE-Eccc-eEEEEEECCCC-CEEEee-EeecCCCCccEE
Confidence 468887774322222222211 11123556889999998887 6666 99999997 54 322221 121 3356689
Q ss_pred EccCCCE--EEEEe-------------cCCcEEEEEECC-CcceeeEEe-------cceeeeeecCCCCeEEEEeecCCe
Q psy3710 193 LNQTGTR--LATAS-------------YKGTLIRVFDTG-SGQKLNELR-------RGLCVLCPNSNNSLLAFPGRKSGH 249 (424)
Q Consensus 193 ~~~~~~~--l~~~~-------------~d~~~i~iwd~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dg~ 249 (424)
|+|+|++ +++++ .++. +.+|++. +++....+. .+...++++|+++.++++...++.
T Consensus 90 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~-v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~ 168 (365)
T 1jof_A 90 ADTNTRAIFLLAAKQPPYAVYANPFYKFAGY-GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK 168 (365)
T ss_dssp TTSCCEEEEEEECSSTTCCEEEEEESSSCCE-EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ECCCCCEEEEEEecCCcceeccceeecCCce-EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE
Confidence 9999994 44553 5888 9999997 465543332 236778999999988776556789
Q ss_pred EEEEeCC-CCCCC-Ceeec--cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEECC--CCcee-----------------
Q psy3710 250 VHLVDLA-DPERP-PLDIA--AHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTG--SGQKL----------------- 305 (424)
Q Consensus 250 i~i~d~~-~~~~~-~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~--~~~~~----------------- 305 (424)
|++||+. +++.. ...+. .|...+..++|+|||+++++++. ++. |.+|++. +++..
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 9999998 55421 12222 24667999999999999988876 567 9998754 44321
Q ss_pred -----------ee-eccCCcEEEEEeCCC------cEEEEEcc-ccccccccccceeeeccCccccCCceeeEEeecCCC
Q psy3710 306 -----------NE-LRRDSSYLCVSSDHG------TVHVFSVD-EAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDP 366 (424)
Q Consensus 306 -----------~~-~~~~~~~l~~~~~d~------~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (424)
.. |+|+|++|++++.+. .|.+|++. +++.. .... ....+...
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~-~~~~------------------~~~~~~~~ 308 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIE-KQLF------------------LSPTPTSG 308 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEE-EEEE------------------EEECSSCC
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEE-Eeee------------------eeecCCCC
Confidence 13 789999888765432 89999996 44321 1000 01111223
Q ss_pred ceEEEEec---CCCeEEEEecc-CcEEEEEecCC
Q psy3710 367 PCICAFGA---DSNSIIVICAD-GSYYKFMFNSK 396 (424)
Q Consensus 367 ~~~~~~s~---~~~~l~~~~~d-g~v~~~~~~~~ 396 (424)
...++|+| ||++|++++.+ +.|.+|+++..
T Consensus 309 ~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 309 GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 45678999 89999999875 89999999744
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=2.7e-19 Score=160.91 Aligned_cols=274 Identities=10% Similarity=-0.014 Sum_probs=177.7
Q ss_pred ceEEEEECCCCCeeEeecCC----eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEEC
Q psy3710 12 GLLYAGFNQDQGCFACGMED----GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD 87 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~ 87 (424)
.+..++|||||++|+..... .|.+|++++++.......+......+.|+|+++.+++++ .++.|++||+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~-------~~~~l~~~d~ 109 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK-------NELNLMKVDL 109 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE-------TTTEEEEEET
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE-------cCCcEEEEEC
Confidence 37788999999998866433 288899888765433332222233478999999999998 4578999999
Q ss_pred CCCcEEEEEee-cCCeEE-------------------EEecCCceEEEe--------eccEEEEeecCCCceeEEEeeCC
Q psy3710 88 LKKQVVICLEF-NAPVKG-------------------VRLRRDKIVVVL--------EGLIKVYTFIQCPQQLHVFETNP 139 (424)
Q Consensus 88 ~~~~~~~~~~~-~~~v~~-------------------~~~~~~~~~~~~--------~~~i~v~~~~~~~~~~~~~~~~~ 139 (424)
.+++....... ...... +.++|++..++. +..|.+||+. +++..... .+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~-~g~~~~~~-~~~ 187 (396)
T 3c5m_A 110 ETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE-TGELEVIH-QDT 187 (396)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT-TCCEEEEE-EES
T ss_pred CCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC-CCcEEeec-cCC
Confidence 98887665552 222222 245666654432 4578889986 44443333 222
Q ss_pred CCCeeEEEeecC-CCCeEEEeeccC------CeEEEEeCCCCCCCCcccccc--cCCeEEEEEccCCCEEEEEecC----
Q psy3710 140 NPKGLCVLCPNS-NNSLLAFPGRKS------GHVHLVDLADPERPPLDIAAH--EAPLSCIALNQTGTRLATASYK---- 206 (424)
Q Consensus 140 ~~~~~~~~~~~~-~~~~l~~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d---- 206 (424)
..+..+.|+| +++.|++ .+.+ ..|.+||+..+ . ...+..+ ...+..++|+|+|+.|+.++.+
T Consensus 188 --~~~~~~~~sp~dg~~l~~-~~~~~~~~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 188 --AWLGHPIYRPFDDSTVGF-CHEGPHDLVDARMWLVNEDGS-N-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQT 262 (396)
T ss_dssp --SCEEEEEEETTEEEEEEE-EECSCSSSCSCCCEEEETTSC-C-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTC
T ss_pred --cccccceECCCCCCEEEE-EecCCCCCCCceEEEEECCCC-c-eeEeeccCCCccccceEECCCCCEEEEEecCCCCc
Confidence 3467788999 7887776 3332 46888898754 2 2333333 2357889999999988877654
Q ss_pred -CcEEEEEECCCcceeeEEec-ceeeeeecC-CCCeEEEEee---------------cCCeEEEEeCCCCCCCCeeeccC
Q psy3710 207 -GTLIRVFDTGSGQKLNELRR-GLCVLCPNS-NNSLLAFPGR---------------KSGHVHLVDLADPERPPLDIAAH 268 (424)
Q Consensus 207 -~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~---------------~dg~i~i~d~~~~~~~~~~~~~~ 268 (424)
+. |++||+.+++....... ... ..++| ++..++++++ .+..|++||+.+++. ..+..+
T Consensus 263 ~~~-l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~ 338 (396)
T 3c5m_A 263 DRV-IYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--QKLCKH 338 (396)
T ss_dssp CEE-EEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC--CEEEEC
T ss_pred cce-EEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce--EEccCC
Confidence 55 99999988865443322 233 78888 8887666432 347899999987653 233344
Q ss_pred CC-----------CeEEEEEcCCCCEEEEEeCC-Cc-EEEEEECCCCc
Q psy3710 269 EA-----------PLSCIALNQTGTRLATASYK-GT-LIRVFDTGSGQ 303 (424)
Q Consensus 269 ~~-----------~v~~~~~~~~~~~l~~~~~d-~~-~i~iwd~~~~~ 303 (424)
.. .+..++|+|||+.|+.++.+ +. .|.++++.+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 339 STSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 43 25667899999988877653 33 03444444443
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=1.1e-17 Score=147.72 Aligned_cols=276 Identities=13% Similarity=0.108 Sum_probs=187.1
Q ss_pred CCCCeeEeec-------CCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCC---CcCCCeEEEEECCC
Q psy3710 20 QDQGCFACGM-------EDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHP---KYPNNRVMIWDDLK 89 (424)
Q Consensus 20 ~~g~~la~g~-------~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~---~~~d~~i~iwd~~~ 89 (424)
++++++.+.. ++.|.+||..+++.......+..+ .+.++|++++++++...... ...++.|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 3556655432 234999999888775444433333 89999999999888621000 00257899999999
Q ss_pred CcEEEEEeec-------CCeEEEEecCCceEEEe-----eccEEEEeecCCCceeEE-EeeCCCCCeeEEEeecCCC-Ce
Q psy3710 90 KQVVICLEFN-------APVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHV-FETNPNPKGLCVLCPNSNN-SL 155 (424)
Q Consensus 90 ~~~~~~~~~~-------~~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~ 155 (424)
++.+.++... .....++++||+.++.. ++.|.+||+. +.+.+.. +.... ...+.+.|++ ..
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~-~~~~~~~~i~~~~----~~~v~~~p~~~~~ 165 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA-KGDYVEDVTAAAG----CWSVIPQPNRPRS 165 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT-TTEEEEEEGGGTT----EEEEEECTTSSSE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC-CCcEEEEEecCCC----cceeEEcCCCCee
Confidence 9999888732 45678999999976654 4689999997 6666655 44322 2223455665 34
Q ss_pred EEEeeccCCeEEEEeCCCCCCCC------cccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCccee--eEEe--
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPP------LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL--NELR-- 225 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~--~~~~-- 225 (424)
+++ .+.||.+.+|++....+.. ..+..+..++ .+.+++++..++..+.++. +.++|+...... ..+.
T Consensus 166 ~~~-~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~ 242 (361)
T 2oiz_A 166 FMT-ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDGPWSLL 242 (361)
T ss_dssp EEE-EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEEEEESC
T ss_pred EEE-ECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCe-EEEEEecCCCceeccccccc
Confidence 444 7888999888886532222 1122222222 3344677888888888898 999999755322 2221
Q ss_pred -----------cceeeeeecCCCCeEEEEee----------cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEE
Q psy3710 226 -----------RGLCVLCPNSNNSLLAFPGR----------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL 284 (424)
Q Consensus 226 -----------~~~~~~~~~~~~~~~~~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 284 (424)
.+...++++|+++.++++.. ..+.|.+||+.+.+ .+..+..+. +.+++|+|||++|
T Consensus 243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spdg~~l 319 (361)
T 2oiz_A 243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQRNLM 319 (361)
T ss_dssp CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETTTTEE
T ss_pred CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCCCCEE
Confidence 11223788999888887654 13589999999876 345555555 9999999999999
Q ss_pred EEEeCCCcEEEEEECCCC--ceeeeecc
Q psy3710 285 ATASYKGTLIRVFDTGSG--QKLNELRR 310 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~--~~~~~~~~ 310 (424)
++++. +. |.+||..++ +.+.++.+
T Consensus 320 ~v~n~-~~-v~v~D~~t~~l~~~~~i~~ 345 (361)
T 2oiz_A 320 LTLDG-GN-VNVYDISQPEPKLLRTIEG 345 (361)
T ss_dssp EEECS-SC-EEEEECSSSSCEEEEEETT
T ss_pred EEeCC-Ce-EEEEECCCCcceeeEEecc
Confidence 98887 88 999999999 99888754
No 170
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.82 E-value=6.7e-17 Score=149.89 Aligned_cols=309 Identities=13% Similarity=0.087 Sum_probs=218.1
Q ss_pred CCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC--CCcEEEEE
Q psy3710 20 QDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL--KKQVVICL 96 (424)
Q Consensus 20 ~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~ 96 (424)
|.+.++++...++ |.++|.++++.+..... ......+.++|+++++++++ .|+.|.+||+. +++.+.++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~-------~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIG-------RDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEc-------CCCeEEEEECCCCCCcEeEEE
Confidence 3344555666556 99999999887655443 33456899999999998877 47899999996 88888888
Q ss_pred eecCCeEEEEec----CCceEEEe----eccEEEEeecCCCceeEEEeeCCC---------CCeeEEEeecCCCCeEEEe
Q psy3710 97 EFNAPVKGVRLR----RDKIVVVL----EGLIKVYTFIQCPQQLHVFETNPN---------PKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 97 ~~~~~v~~~~~~----~~~~~~~~----~~~i~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~ 159 (424)
........++|+ ||+.+++. ++.+.++|.. +.+.+..+..... ...+..+..++++..+++.
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~-t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE-TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT-TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC-CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 866678899999 69866654 6899999986 7777776653210 1145667778887777665
Q ss_pred eccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcceeeEEec-ce-----eee-
Q psy3710 160 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQKLNELRR-GL-----CVL- 231 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~~~~~~~-~~-----~~~- 231 (424)
-..+|.|.++|....................+.|+|+|++++++. .++. |.++|+.+++.+..++. +. ...
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred ecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 778899999998764211111112344567889999999987766 4566 99999999988877765 21 122
Q ss_pred eecCCCCeEEEEee-cCCeEEEEeCCCCCC------CCeeeccCCCCeEEEEEcCCCCEEEEEeC-------CCcEEEEE
Q psy3710 232 CPNSNNSLLAFPGR-KSGHVHLVDLADPER------PPLDIAAHEAPLSCIALNQTGTRLATASY-------KGTLIRVF 297 (424)
Q Consensus 232 ~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~~i~iw 297 (424)
.++|++..+++++. .++.|.++|....+. .+..+......-..++.+|+++++.+... ... |.++
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~-v~v~ 473 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS-VAVF 473 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC-EEEE
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce-EEEE
Confidence 25777677766554 568999999987331 23344443333345788999999988763 346 9999
Q ss_pred ECCCC---------ceee-----------------eeccCCcEEEEEe-----CCCcEEEEEccccccccccc
Q psy3710 298 DTGSG---------QKLN-----------------ELRRDSSYLCVSS-----DHGTVHVFSVDEAQKINKQS 339 (424)
Q Consensus 298 d~~~~---------~~~~-----------------~~~~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~ 339 (424)
|+.+. +.+. +|+++|+++..+. .++.|.|+|.++++....+.
T Consensus 474 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 474 DIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp EGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 98876 2221 3678998877663 37999999999987655443
No 171
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.82 E-value=1.4e-17 Score=150.71 Aligned_cols=212 Identities=13% Similarity=0.076 Sum_probs=148.1
Q ss_pred CeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCC---------ceeEEE---eeCCCCCeeE
Q psy3710 80 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCP---------QQLHVF---ETNPNPKGLC 145 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~---------~~~~~~---~~~~~~~~~~ 145 (424)
+.+++|+... . .....+..+++++++.+++. ...+++|+..... ..+... ........+.
T Consensus 23 ~~vri~~~~~-~-----~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPE-E-----LPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCS-S-----CCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCcc-c-----cCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 4677776421 1 12345788899988766554 2348888753110 011100 0011234588
Q ss_pred EEeecCCCCeEEE---eeccCCeEEEEeCCCC-----C--CC---CcccccccCCeEEEEEccC-CCEEEEEecCCcEEE
Q psy3710 146 VLCPNSNNSLLAF---PGRKSGHVHLVDLADP-----E--RP---PLDIAAHEAPLSCIALNQT-GTRLATASYKGTLIR 211 (424)
Q Consensus 146 ~~~~~~~~~~l~~---~~~~dg~i~i~d~~~~-----~--~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~~i~ 211 (424)
+++|+|++++|++ +|+.|+.|++||+.+. . ++ ...+.+|...|.+++|+|+ +.+|++++.|+. |+
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~-v~ 175 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS-IA 175 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-EE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-EE
Confidence 9999999999994 4899999999998653 1 11 3455679999999999998 789999999999 99
Q ss_pred EEECCCcceeeEEec---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-------cCCCCeEEEEEcCCC
Q psy3710 212 VFDTGSGQKLNELRR---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-------AHEAPLSCIALNQTG 281 (424)
Q Consensus 212 iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~ 281 (424)
+||++++........ .+..++|+|++..++. |+.||.|++||++ +. ....+. .|...|.+++|++++
T Consensus 176 iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~las-gs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 176 VLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAV-GKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp EEEESSSEEEEEEECGGGCEEEEEECTTSSCEEE-EETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred EEEcCCCcceeeccCCCCceeEEEEcCCCCEEEE-EcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEEEEEEecCc
Confidence 999998866655443 4788999999877765 8899999999998 22 122222 233489999999998
Q ss_pred CEEEEEe-CCC------cEEEEEECCCC
Q psy3710 282 TRLATAS-YKG------TLIRVFDTGSG 302 (424)
Q Consensus 282 ~~l~~~~-~d~------~~i~iwd~~~~ 302 (424)
.++++.+ .+| . +++|++...
T Consensus 253 ~~l~~~~~~dg~~~~~~~-v~i~~l~~~ 279 (434)
T 2oit_A 253 VFAIVYAAADGTLETSPD-VVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTCCSSSCCE-EEEEECCCT
T ss_pred eEEEEEccCCCccCCCCc-eEEEEeccC
Confidence 8876543 332 3 889999865
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1.5e-17 Score=159.94 Aligned_cols=288 Identities=12% Similarity=0.041 Sum_probs=182.5
Q ss_pred cccccCCceEEEEECCCCCeeEee--cCCe-EEEEeCCcCcccccccccCCCee---------eEEEe--ccCce-EEEE
Q psy3710 5 TSSTYKNGLLYAGFNQDQGCFACG--MEDG-FRIYNCDPLKEKERQDFTDGGLG---------HVEML--FRCNY-LALV 69 (424)
Q Consensus 5 ~l~~h~~~V~~~~~s~~g~~la~g--~~~~-i~iw~~~~~~~~~~~~~~~~~i~---------~~~~~--~~~~~-l~~~ 69 (424)
.+.+|...|..++|++++-+++.+ ..++ ..||....+........+...+. ...|+ |+++. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 367899999999999887666766 4455 88888543333322333333444 45565 99999 7776
Q ss_pred eCCcCCCcCCCeEEEEECC--C-CcEEEEEe-----ecCCeEEEEecCCceEEEe---e----------ccEEEEeecCC
Q psy3710 70 GGGTHPKYPNNRVMIWDDL--K-KQVVICLE-----FNAPVKGVRLRRDKIVVVL---E----------GLIKVYTFIQC 128 (424)
Q Consensus 70 ~~~~~~~~~d~~i~iwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~~~~---~----------~~i~v~~~~~~ 128 (424)
+.. +..|.++++. . ++...... +...+..++|+||+..+++ + ..|++|++...
T Consensus 98 ~~~------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 98 HFG------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp BTT------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred ECC------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 632 5678888875 3 44333222 2456789999999977764 4 47999998621
Q ss_pred C----ceeEEEe-eCCCCCeeEEEeecCCCCeEEEeeccC--------CeEEEEeCCC-CC--CCCcccccccCCeEEEE
Q psy3710 129 P----QQLHVFE-TNPNPKGLCVLCPNSNNSLLAFPGRKS--------GHVHLVDLAD-PE--RPPLDIAAHEAPLSCIA 192 (424)
Q Consensus 129 ~----~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~d--------g~i~i~d~~~-~~--~~~~~~~~~~~~v~~~~ 192 (424)
. .....+. .+ ...+..+.|+|||+.|++ ++.+ ..|++||+.. +. ........|...+..++
T Consensus 172 ~~~~~~~~~~l~~~~--~~~~~~~~~SpDG~~la~-~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~ 248 (662)
T 3azo_A 172 AAADRSAVRELSDDA--HRFVTGPRLSPDGRQAVW-LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE 248 (662)
T ss_dssp TTTCGGGSEESSCSC--SSEECCCEECTTSSEEEE-EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE
T ss_pred ccccCCceeEEEecC--CCcccCceECCCCCEEEE-EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE
Confidence 0 2333333 22 234667789999999997 4433 4799999983 31 22223344578899999
Q ss_pred EccCCCEEEEEecCC--cEEEEEECCCcceeeEEecc-----------eeeeeecCCCCeEEEEeecCCeEEEE--eCCC
Q psy3710 193 LNQTGTRLATASYKG--TLIRVFDTGSGQKLNELRRG-----------LCVLCPNSNNSLLAFPGRKSGHVHLV--DLAD 257 (424)
Q Consensus 193 ~~~~~~~l~~~~~d~--~~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~dg~i~i~--d~~~ 257 (424)
|+|||++++++..++ . |.+||..+++.......+ ...+++++++.. ++++.. +.+++| |+.+
T Consensus 249 ~spdg~l~~~~~~~~~~~-l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~-~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 249 WAPDGSLIVATDRTGWWN-LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLI-AVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp ECTTSCEEEEECTTSSCE-EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE-EEEEBS-SSCEEEEEETTT
T ss_pred ECCCCeEEEEECCCCCeE-EEEEECCCCceeecccccccccCccccccCceEeEeCCCEE-EEEEEc-CccEEEEEECCC
Confidence 999999777887777 5 777777666544332221 234566666664 455666 888888 5444
Q ss_pred CCCCCeeeccCCCCeEEE-EEcCCCCEEEEEeCCCc-EEEEEECCCCceee
Q psy3710 258 PERPPLDIAAHEAPLSCI-ALNQTGTRLATASYKGT-LIRVFDTGSGQKLN 306 (424)
Q Consensus 258 ~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~-~i~iwd~~~~~~~~ 306 (424)
++ ...+..|...+..+ +++++.-++++++.+.. .|.++|+.+++...
T Consensus 326 ~~--~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~ 374 (662)
T 3azo_A 326 GE--LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRART 374 (662)
T ss_dssp TE--EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred Cc--EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEE
Confidence 33 45566777777777 55444334444455533 16666777776543
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=4.3e-16 Score=133.41 Aligned_cols=240 Identities=12% Similarity=0.120 Sum_probs=164.3
Q ss_pred cccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCccccccc------ccCCCeeeEEEe-ccCceEEEEeCCcCCCcC
Q psy3710 7 STYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQD------FTDGGLGHVEML-FRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 7 ~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~------~~~~~i~~~~~~-~~~~~l~~~~~~~~~~~~ 78 (424)
.+|-..+.+++++|+|+++++...++ |.+||.+ ++...... .+......+++. +++..+ ++... .
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~-v~~~~-----~ 98 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDII-VTERS-----P 98 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEE-EEECG-----G
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEE-EEcCC-----C
Confidence 45667899999999999888876655 9999976 33322221 123456778885 445444 44421 1
Q ss_pred CCeEEEEECCCCcEEEEEe--ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCC
Q psy3710 79 NNRVMIWDDLKKQVVICLE--FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (424)
++.|.+|| .+++.+..+. ....+.++++++++.++++ ++.|.+|+. .++.+..+...........+++++++
T Consensus 99 ~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~~~~~~~~~~~~~p~~i~~~~~g 175 (286)
T 1q7f_A 99 THQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ--NGNVLHKFGCSKHLEFPNGVVVNDKQ 175 (286)
T ss_dssp GCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT--TSCEEEEEECTTTCSSEEEEEECSSS
T ss_pred CCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC--CCCEEEEeCCCCccCCcEEEEECCCC
Confidence 58999999 6788777765 2357899999999876665 568999995 45555555433333446788999999
Q ss_pred CeEEEeeccCCeEEEEeCCCCCCCCcccccc--cCCeEEEEEccCCCEEEEEecCC-cEEEEEECCCcceeeEEecceee
Q psy3710 154 SLLAFPGRKSGHVHLVDLADPERPPLDIAAH--EAPLSCIALNQTGTRLATASYKG-TLIRVFDTGSGQKLNELRRGLCV 230 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~~i~iwd~~~~~~~~~~~~~~~~ 230 (424)
+++++ ...++.|++||... ..+..+..+ ...+..++++++|+++++...++ . |.+||. +++.+..+..+
T Consensus 176 ~l~v~-~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~--- 247 (286)
T 1q7f_A 176 EIFIS-DNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESK--- 247 (286)
T ss_dssp EEEEE-EGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEES---
T ss_pred CEEEE-ECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEccc---
Confidence 86665 77899999999854 334444332 35789999999998888887775 8 999995 45544444311
Q ss_pred eeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCC
Q psy3710 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 302 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 302 (424)
.....+.+++++|+|+++++ +.++. |++|++...
T Consensus 248 ------------------------------------~~~~~~~~i~~~~~g~l~vs-~~~~~-v~v~~~~~~ 281 (286)
T 1q7f_A 248 ------------------------------------VKHAQCFDVALMDDGSVVLA-SKDYR-LYIYRYVQL 281 (286)
T ss_dssp ------------------------------------SCCSCEEEEEEETTTEEEEE-ETTTE-EEEEECSCC
T ss_pred ------------------------------------CCCCcceeEEECCCCcEEEE-CCCCe-EEEEEcccc
Confidence 11224567888888876655 56777 888877554
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.78 E-value=3.7e-15 Score=138.24 Aligned_cols=286 Identities=10% Similarity=0.044 Sum_probs=199.9
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCC--cCcccccccccCCCeeeEEEe----ccCceEEEEeCCcCCCcCCCeEE
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCD--PLKEKERQDFTDGGLGHVEML----FRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
..+..++|||||+++.+++.++ |.+||+. +.+.+..... ......+.++ |++++++++.. .++++.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~------~~~~v~ 269 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAY------WPPQYV 269 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEE------ETTEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEc------cCCeEE
Confidence 3567899999999999888777 9999985 6555443333 2345678999 69999988874 369999
Q ss_pred EEECCCCcEEEEEeec------------CCeEEEEecCCceEE-Ee---eccEEEEeecCCCceeEEEeeCCCCCeeEEE
Q psy3710 84 IWDDLKKQVVICLEFN------------APVKGVRLRRDKIVV-VL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVL 147 (424)
Q Consensus 84 iwd~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~-~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (424)
++|..+.+.+..+... ..+..+..++++..+ +. .|.|.++|.. ....+....... ......+
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~-~~~~~~v~~i~~-~~~~~d~ 347 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT-DLNNLKTTEISA-ERFLHDG 347 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT-CSSEEEEEEEEC-CSSEEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC-CCccceeeeeec-cccccCc
Confidence 9999999999887621 257788888876433 33 6899999986 332222211111 1235567
Q ss_pred eecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc-----cccCCeEEEEEccCCCEEE-EEe-cCCcEEEEEECCC---
Q psy3710 148 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-----AHEAPLSCIALNQTGTRLA-TAS-YKGTLIRVFDTGS--- 217 (424)
Q Consensus 148 ~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~-~~~-~d~~~i~iwd~~~--- 217 (424)
.|+|++++++++...++.|.++|+.++ +....+. .|.+.-..+ ++|++..+. +.. .++. |.++|..+
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~-Vsvid~~~~~~ 424 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS-VALIGTDPEGH 424 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTC
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCC-cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe-EEEecCCCCCC
Confidence 899999999886777899999999986 4333332 233222222 578755444 443 4578 99999987
Q ss_pred ----cceeeEEecc---eeeeeecCCCCeEEEEeec------CCeEEEEeCCCC-----CCCCeeec--------cCCCC
Q psy3710 218 ----GQKLNELRRG---LCVLCPNSNNSLLAFPGRK------SGHVHLVDLADP-----ERPPLDIA--------AHEAP 271 (424)
Q Consensus 218 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------dg~i~i~d~~~~-----~~~~~~~~--------~~~~~ 271 (424)
.+.+.+++.. ...+..+|+++.+.+.... .++|.++|+.+. ......+. .....
T Consensus 425 ~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 504 (567)
T 1qks_A 425 PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPR 504 (567)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCE
T ss_pred ccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcc
Confidence 5677777643 2446789999998885421 469999999876 32212221 12457
Q ss_pred eEEEEEcCCCCEEEEEeC-----CCcEEEEEECCCCceeeeec
Q psy3710 272 LSCIALNQTGTRLATASY-----KGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 272 v~~~~~~~~~~~l~~~~~-----d~~~i~iwd~~~~~~~~~~~ 309 (424)
+..+.|+|+|+++..+.. ++. |.++|.++++.+.++.
T Consensus 505 ~~~~~~~~~G~~~~~s~~~~~~~~~~-i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 505 VVQGEFNKDGTEVWFSVWNGKDQESA-LVVVDDKTLELKHVIK 546 (567)
T ss_dssp EEEEEECTTSSEEEEEEECCTTSCCE-EEEEETTTTEEEEEEC
T ss_pred eEeeeECCCCCEEEEEeecCCCCCCc-EEEEECCCceEEEEeC
Confidence 899999999998887743 677 9999999999888765
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2.4e-16 Score=151.51 Aligned_cols=227 Identities=8% Similarity=-0.005 Sum_probs=157.3
Q ss_pred ecCCeEEEEecCCceEEEe-----eccEEEEeecCCCceeEEEeeCCCCCe-------eEEEee--cCCCCe-EEEeecc
Q psy3710 98 FNAPVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHVFETNPNPKG-------LCVLCP--NSNNSL-LAFPGRK 162 (424)
Q Consensus 98 ~~~~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~-l~~~~~~ 162 (424)
+...+..++++++..+++. ++...+|... .+.....+..+..... -..+.+ |||++. |+++...
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 5677899999998877765 4578899874 3344444544432211 003333 499999 8874555
Q ss_pred CCeEEEEeCC--C-CCCCCccccc-----ccCCeEEEEEccCCCEEEEEecC----------CcEEEEEECCC------c
Q psy3710 163 SGHVHLVDLA--D-PERPPLDIAA-----HEAPLSCIALNQTGTRLATASYK----------GTLIRVFDTGS------G 218 (424)
Q Consensus 163 dg~i~i~d~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~~i~iwd~~~------~ 218 (424)
+..|.++++. . + . ...+.. |...+..++|+|||+.|++++.+ .. |++||+.+ +
T Consensus 101 ~~~l~~~~~~~~g~~-~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 101 DQRLYAFEPDAPGGA-V-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF-LAAVPLDGSAAADRS 177 (662)
T ss_dssp TCCEEEECTTSTTCC-C-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE-EEEEETTSTTTTCGG
T ss_pred CCeEEEEcCCCCCCC-C-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE-EEEEECCCCccccCC
Confidence 6778888876 2 2 2 334444 66788999999999999998877 46 99999988 5
Q ss_pred ceeeEE-e--cceeeeeecCCCCeEEEEeecC-------CeEEEEeCC-CCC--CCCeeeccCCCCeEEEEEcCCCCEEE
Q psy3710 219 QKLNEL-R--RGLCVLCPNSNNSLLAFPGRKS-------GHVHLVDLA-DPE--RPPLDIAAHEAPLSCIALNQTGTRLA 285 (424)
Q Consensus 219 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~d-------g~i~i~d~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~ 285 (424)
+..... . ......+++|+|+.++++.... ..|++||+. ++. ........|...+..++|+|||++++
T Consensus 178 ~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 178 AVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp GSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEE
T ss_pred ceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEE
Confidence 543322 2 1245678999999998865443 489999998 441 23333445678899999999999888
Q ss_pred EEeCCC--cEEEEEECCCCceee--------------------eeccCCcEEEEEeCCCcEEEEEcc
Q psy3710 286 TASYKG--TLIRVFDTGSGQKLN--------------------ELRRDSSYLCVSSDHGTVHVFSVD 330 (424)
Q Consensus 286 ~~~~d~--~~i~iwd~~~~~~~~--------------------~~~~~~~~l~~~~~d~~i~iw~~~ 330 (424)
+++.++ . |.+||+.+++... .++++++++++++. +.++||.+.
T Consensus 258 ~~~~~~~~~-l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 258 ATDRTGWWN-LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EECTTSSCE-EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred EECCCCCeE-EEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 888887 5 7777776665332 13368889999988 999999443
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=1.4e-15 Score=132.89 Aligned_cols=258 Identities=9% Similarity=0.024 Sum_probs=177.2
Q ss_pred CCceEEEEECCCCCeeEeecCCe-EEEEeCCcCccccccccc-CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEEC
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFT-DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD 87 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~ 87 (424)
-+.+.+++++|+|+++++...+. +.+++.+.... ...+ .+++ .+++|.+||.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----------------------~~~~i~~~d~ 76 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFV---YQQRGLGPI-----------------------EEDTILVIDP 76 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSC---BSCGGGCSC-----------------------CSCCEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCccee---ecccccccc-----------------------cCCcEEEEEC
Confidence 46799999999999998887775 54443332211 1111 1111 2589999999
Q ss_pred CCCcEEEEEe--ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEee-------CCCCCeeEEEeecC-CCC
Q psy3710 88 LKKQVVICLE--FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFET-------NPNPKGLCVLCPNS-NNS 154 (424)
Q Consensus 88 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~ 154 (424)
.+++.+..+. +-..+..+++++++.++++ ++.|++|+.......+..+.. .........++++| ++.
T Consensus 77 ~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 77 NNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp TTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC
T ss_pred CCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe
Confidence 8899877665 2357899999999977766 578999997422124555432 11223467889999 677
Q ss_pred eEEEeec-cCCeEEEEeCCCCCCCCccccc----------ccCCeEEEEEccC-CCEEEEEecCCcEEEEEECCCcceee
Q psy3710 155 LLAFPGR-KSGHVHLVDLADPERPPLDIAA----------HEAPLSCIALNQT-GTRLATASYKGTLIRVFDTGSGQKLN 222 (424)
Q Consensus 155 ~l~~~~~-~dg~i~i~d~~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~~i~iwd~~~~~~~~ 222 (424)
++++ .+ .++.|++|+... ..+..+.. +-.....++++|+ +.++++...++. |++||..+++.+.
T Consensus 157 lyv~-d~~~~~~I~~~~~~g--~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 157 VFVS-DGYCNSRIVQFSPSG--KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVR 232 (329)
T ss_dssp EEEE-ECSSCCEEEEECTTS--CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEE
T ss_pred EEEE-eCCCCCeEEEEcCCC--CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEE
Confidence 6665 64 689999999543 44444432 2234889999998 666777777888 9999999888888
Q ss_pred EEec-----ceeeeeecCCCCeEEEE-------eecCCeEEEEeCCCCCCCCeee---ccCCCCeEEEEEcCCCCEEEEE
Q psy3710 223 ELRR-----GLCVLCPNSNNSLLAFP-------GRKSGHVHLVDLADPERPPLDI---AAHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 223 ~~~~-----~~~~~~~~~~~~~~~~~-------~~~dg~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~ 287 (424)
.+.. ....++++| ..++.+ ...+..|++||..+++. ...+ ..+...+..++++|+|.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 233 EIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI-IDVFKPVRKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp EECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCE-EEEECCSSSCCSSEEEEEECTTSEEEEEE
T ss_pred EEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeE-EEEEcCCCCccCCeeEEEECCCCCEEEEE
Confidence 7743 255667777 233222 33456899999988763 3333 3566779999999999888888
Q ss_pred eCCCcEEEEEECCC
Q psy3710 288 SYKGTLIRVFDTGS 301 (424)
Q Consensus 288 ~~d~~~i~iwd~~~ 301 (424)
..++. |++|++..
T Consensus 310 ~~~~~-I~~~~~~~ 322 (329)
T 3fvz_A 310 AHTNT-VWKFTLTE 322 (329)
T ss_dssp SSSCC-EEEEEEEE
T ss_pred CCCCE-EEEEeCCc
Confidence 88888 99998753
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=2.1e-15 Score=131.55 Aligned_cols=256 Identities=7% Similarity=0.040 Sum_probs=177.6
Q ss_pred Ce-EEEEeCCcCcccccccc-----c-CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeE
Q psy3710 31 DG-FRIYNCDPLKEKERQDF-----T-DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVK 103 (424)
Q Consensus 31 ~~-i~iw~~~~~~~~~~~~~-----~-~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~ 103 (424)
++ |.+||.++++....... . ......+.+ +++.+..+... ++.|.+||..+++.+.++.....+.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFTSPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCSSEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCCCCc
Confidence 44 99999988776432210 1 122334444 45555555532 5899999999999999988677899
Q ss_pred EEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCC------CCCeeEEEeecCCCCeEEEeec-cCCeEEEEeCCC
Q psy3710 104 GVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNP------NPKGLCVLCPNSNNSLLAFPGR-KSGHVHLVDLAD 173 (424)
Q Consensus 104 ~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~-~dg~i~i~d~~~ 173 (424)
.+++++++.+.++ ++.|.+||.. +.+....+.... .+.. +++ ++..+.++.. .++.|.++|+.+
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~~~~~~~~p~~---i~~--~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPDMDMESGSTEQ---MVQ--YGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTTCCTTTCBCCC---EEE--ETTEEEEEECTTCCEEEEEETTT
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCCccccCCCcce---EEE--ECCEEEEEcCCCCCEEEEEECCC
Confidence 9999888865555 6899999986 667666666544 3333 344 3445555244 488999999998
Q ss_pred CCCCCcccccccCCeEEEEEccCCCEEEEEecC----------CcEEEEEECCCcceeeEEec----ceeeeeecCCCCe
Q psy3710 174 PERPPLDIAAHEAPLSCIALNQTGTRLATASYK----------GTLIRVFDTGSGQKLNELRR----GLCVLCPNSNNSL 239 (424)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~ 239 (424)
+ +....+.. ......++++|+|++++++..+ +. |.++|..+++....+.. ....++++|+++.
T Consensus 162 ~-~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 162 D-KVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp T-EEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred C-eEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 6 44444433 2345788999999877776654 67 99999999988777653 3678999999998
Q ss_pred EEEEeecCCeEEEEeCCCCCCCCee-eccCCCCeEEEEEcCC-CCEEEEE----eCCCcEEEEEECCCCceeeee
Q psy3710 240 LAFPGRKSGHVHLVDLADPERPPLD-IAAHEAPLSCIALNQT-GTRLATA----SYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 240 ~~~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~~~----~~d~~~i~iwd~~~~~~~~~~ 308 (424)
++++.. .|.+||..+++..... +..+......++++|+ ++.+++. ..++. |.+||.. ++.+.++
T Consensus 239 lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~-V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 239 LYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI-VYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEE-EEEECTT-CCEEEEE
T ss_pred EEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCE-EEEECCC-CCEEEEE
Confidence 887443 8999999887643222 2222467899999995 5555554 45677 9999987 7776655
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=1.1e-15 Score=134.82 Aligned_cols=258 Identities=11% Similarity=0.064 Sum_probs=168.8
Q ss_pred CCceEEEEECCCCCeeEeec---------CCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCC
Q psy3710 10 KNGLLYAGFNQDQGCFACGM---------EDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPN 79 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~---------~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d 79 (424)
-..+..+++ ||++++... .++ |.+|++++++.... ..+..+.|+|+++.+++++..... ..
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~--~~ 84 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEK--KV 84 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTT--TE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCC--Cc
Confidence 346778888 999888542 123 99999988765332 457789999999999988742100 02
Q ss_pred CeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---e---------------------------ccEEEEeecCCC
Q psy3710 80 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---E---------------------------GLIKVYTFIQCP 129 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~---------------------------~~i~v~~~~~~~ 129 (424)
..|.+|++.+++......... +..++|+||+..++. + ..|.+|++. ++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~-~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE-SE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT-TT
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC-CC
Confidence 358888998887766655555 999999999966654 2 468888885 55
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC------C-eEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEE
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS------G-HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d------g-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 202 (424)
+.+..+.. . .+..+.|+|++ ++++ +..+ . ...+|.+++ .....+..+ ..+..+ +|+|+.|+.
T Consensus 163 ~~~~~l~~-~---~~~~~~~spdg-~~~~-~~~~~~~~~~~~~~~l~~~d~--~~~~~l~~~-~~~~~~--spdg~~l~~ 231 (347)
T 2gop_A 163 EVIEEFEK-P---RFSSGIWHRDK-IVVN-VPHREIIPQYFKFWDIYIWED--GKEEKMFEK-VSFYAV--DSDGERILL 231 (347)
T ss_dssp EEEEEEEE-E---TTCEEEEETTE-EEEE-EECCCSSCCSSCCEEEEEEET--TEEEEEEEE-ESEEEE--EECSSCEEE
T ss_pred eEEeeecC-C---CcccccCCCCe-EEEE-EecccccccccccccEEEeCC--CceEEeccC-cceeeE--CCCCCEEEE
Confidence 54344443 2 35677899999 6655 5443 2 334444443 233444444 555554 999999888
Q ss_pred EecC--------CcEEEEEECCCcceeeEEec---ceee-eeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCC
Q psy3710 203 ASYK--------GTLIRVFDTGSGQKLNELRR---GLCV-LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEA 270 (424)
Q Consensus 203 ~~~d--------~~~i~iwd~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 270 (424)
++.+ .. |.+|| +++....... .+.. +.++ ++ ++++++.++.+++| +.+++ ...+..+..
T Consensus 232 ~~~~~~~~~~~~~~-l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g~--~~~~~~~~~ 302 (347)
T 2gop_A 232 YGKPEKKYMSEHNK-LYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDGE--IKPIAKGRH 302 (347)
T ss_dssp EECCSSSCCCSSCE-EEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESSS--EEEEECSSS
T ss_pred EEccccCCccccce-EEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCCc--eEEEecCCC
Confidence 7754 35 88888 5543332222 2443 6677 65 77778999999999 87432 233345577
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 271 PLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 271 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
.|.+++|+| .++++++.++....+|.+.
T Consensus 303 ~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 303 WIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred eEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 899999999 6777777776512666665
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=6.3e-16 Score=135.02 Aligned_cols=228 Identities=13% Similarity=0.101 Sum_probs=159.3
Q ss_pred CeeEEEeecCCCCeEEEeeccC------------------------CeEEEEeCCCCCCCCcccc-cccCCeEEEEEccC
Q psy3710 142 KGLCVLCPNSNNSLLAFPGRKS------------------------GHVHLVDLADPERPPLDIA-AHEAPLSCIALNQT 196 (424)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~~~d------------------------g~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~ 196 (424)
..+..++++|+|+++++ ...+ +.|.+||..++ +....+. .+-.....++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIF-HRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA-EILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp SCEEEEEECTTCCEEEE-ECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC-CEEEEECTTTCSSEEEEEECTT
T ss_pred CCceEEEECCCCCEEEE-eCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC-eEEeccCCCccCCceEEEECCC
Confidence 34778899999988876 6555 47999999875 3333332 34457899999999
Q ss_pred CCEEEEEecCCcEEEEEECCCcc-eeeEEec------------ceeeeeecCCCCeEEEEee-cCCeEEEEeCCCCCCCC
Q psy3710 197 GTRLATASYKGTLIRVFDTGSGQ-KLNELRR------------GLCVLCPNSNNSLLAFPGR-KSGHVHLVDLADPERPP 262 (424)
Q Consensus 197 ~~~l~~~~~d~~~i~iwd~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~ 262 (424)
|+++++...++. |+.||..... .+..+.. ....++++|++..++++.+ .++.|++||.. +. ..
T Consensus 102 g~l~v~d~~~~~-v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~-~~ 178 (329)
T 3fvz_A 102 GNYWVTDVALHQ-VFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GK-FV 178 (329)
T ss_dssp SCEEEEETTTTE-EEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SC-EE
T ss_pred CCEEEEECCCCE-EEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CC-EE
Confidence 998888888888 9999986542 4555521 2567899996666666565 69999999943 32 22
Q ss_pred eeecc----------CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEECCCCceeeeec--------------cCCcEEEE
Q psy3710 263 LDIAA----------HEAPLSCIALNQT-GTRLATASYKGTLIRVFDTGSGQKLNELR--------------RDSSYLCV 317 (424)
Q Consensus 263 ~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--------------~~~~~l~~ 317 (424)
..+.. +-.....++++|+ +.++++...++. |++|+..+++.+..+. | +..+++
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 33321 2234899999998 677777777888 9999999888877652 3 222222
Q ss_pred E-------eCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEE
Q psy3710 318 S-------SDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYK 390 (424)
Q Consensus 318 ~-------~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~ 390 (424)
. ..+..|++|+..+++.+...... ..+......++++|+|+.+++...++.|++
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~-------------------~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV-------------------RKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCS-------------------SSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCC-------------------CCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 2 33458999999888765442210 012234568999999977777778999999
Q ss_pred EEecC
Q psy3710 391 FMFNS 395 (424)
Q Consensus 391 ~~~~~ 395 (424)
|++..
T Consensus 318 ~~~~~ 322 (329)
T 3fvz_A 318 FTLTE 322 (329)
T ss_dssp EEEEE
T ss_pred EeCCc
Confidence 99863
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=4.2e-15 Score=130.18 Aligned_cols=263 Identities=12% Similarity=0.024 Sum_probs=171.5
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
..|.+++|++++..++....++ ++.|. .+.......+......+.|.++++.+++.. .++.|.+||.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-------~~~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDV-------FEGNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEET-------TTCEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEEC-------CCCEEEEEeCCC
Confidence 4578899999988777655455 88883 222222333345567899999888554444 368999999988
Q ss_pred CcEEEEEe-ecCCeEEEEecCCceEEEe---e----ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec
Q psy3710 90 KQVVICLE-FNAPVKGVRLRRDKIVVVL---E----GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR 161 (424)
Q Consensus 90 ~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (424)
++...... ....+.++++++++.++++ + +.|.+||.. .......+........+..+.++|+++++++ ..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~~ 153 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFT-DF 153 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEECSSSSCCCEEEEEECTTSCEEEE-EC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEccCccCCcccceEECCCCCEEEE-ec
Confidence 88765543 5678999999999876655 2 479999975 4433323322222345778899999987775 43
Q ss_pred c------CCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEE-ecCCcEEEEEECCC-cceeeE--------Ee
Q psy3710 162 K------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATA-SYKGTLIRVFDTGS-GQKLNE--------LR 225 (424)
Q Consensus 162 ~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~~i~iwd~~~-~~~~~~--------~~ 225 (424)
. .+.|..+|..++ ....+..+...+..++|+|+|+.++.+ +.++. |.+||+.+ +..... +.
T Consensus 154 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~ 230 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFR--TVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFT 230 (333)
T ss_dssp CCBTTBCCEEEEEECTTSC--CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECC
T ss_pred cccccCCCceEEEEeCCCC--EEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecC
Confidence 2 355666665542 233333344567899999999866544 55777 99999864 332221 11
Q ss_pred c--ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCC------CCeEEEEEcCCCCEEEEEeCCC
Q psy3710 226 R--GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE------APLSCIALNQTGTRLATASYKG 291 (424)
Q Consensus 226 ~--~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d~ 291 (424)
. ....+++++++. ++++...++.|.+||.. ++ ....+..+. ..+.+++|+||++.|+.++.++
T Consensus 231 ~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~-g~-~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 231 GHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR-GY-PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp SSSEEEEEEEBTTCC-EEEEEETTTEEEEECTT-SC-EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCCCCceEECCCCC-EEEEEcCCCEEEEECCC-CC-EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 1 245678888876 44445667899999984 32 233333332 2688999999987777666553
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=7.6e-15 Score=129.33 Aligned_cols=253 Identities=11% Similarity=0.089 Sum_probs=162.3
Q ss_pred CCeeeEEEeccCceEEEEeCCcC--CCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe---e---cc--EE
Q psy3710 52 GGLGHVEMLFRCNYLALVGGGTH--PKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---E---GL--IK 121 (424)
Q Consensus 52 ~~i~~~~~~~~~~~l~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~---~~--i~ 121 (424)
..+....+ +++.++++..... ....++.|.+||+.+++... + ..+..++|+||+..++. + +. |.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I---ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E---ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c---ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 34555666 8888887642100 00025789999998887543 3 56889999999977765 2 33 67
Q ss_pred EEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc--------------------------CCeEEEEeCCCCC
Q psy3710 122 VYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK--------------------------SGHVHLVDLADPE 175 (424)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------------dg~i~i~d~~~~~ 175 (424)
+|++. .++........ . +..+.|+||++.|++++.. ...|.+||+.++
T Consensus 89 ~~~~~-~g~~~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~- 162 (347)
T 2gop_A 89 VADLE-TLSSKKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE- 162 (347)
T ss_dssp EEETT-TTEEEEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT-
T ss_pred EEECC-CCceEEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC-
Confidence 77765 44444333332 2 7788999999999883322 357899999875
Q ss_pred CCCcccccccCCeEEEEEccCCCEEEEEecCC-------cEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecC-
Q psy3710 176 RPPLDIAAHEAPLSCIALNQTGTRLATASYKG-------TLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKS- 247 (424)
Q Consensus 176 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 247 (424)
+.+..+.. . .+..++|+|+| .++++..+. . ..+|.+.+++....... .....++|++..+++.+..+
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~-~~l~~~d~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKF-WDIYIWEDGKEEKMFEK-VSFYAVDSDGERILLYGKPEK 237 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCC-EEEEEEETTEEEEEEEE-ESEEEEEECSSCEEEEECCSS
T ss_pred eEEeeecC-C-CcccccCCCCe-EEEEEeccccccccccc-ccEEEeCCCceEEeccC-cceeeECCCCCEEEEEEcccc
Confidence 33234444 3 78899999999 777775542 3 34443334443322222 33334489999888865432
Q ss_pred ------CeEEEEeCCCCCCCCeeeccCCCCeEE-EEEcCCCCEEEEEeCCCcEEEEEECCCCceeee-----------ec
Q psy3710 248 ------GHVHLVDLADPERPPLDIAAHEAPLSC-IALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-----------LR 309 (424)
Q Consensus 248 ------g~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-----------~~ 309 (424)
..|++|| +++ .......+...+.. +.|+ |+ ++++++.++. ++|| +.+++.... ++
T Consensus 238 ~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~-~~l~-~~~g~~~~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS-VNLY-IWDGEIKPIAKGRHWIMGFDVD 310 (347)
T ss_dssp SCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEEETTE-EEEE-EESSSEEEEECSSSEEEEEEES
T ss_pred CCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEecCCc-EEEE-EcCCceEEEecCCCeEEeeeee
Confidence 5788888 332 23334456778886 9999 88 9999999998 9999 775554322 33
Q ss_pred cCCcEEEEEeCCCcE-EEEEcc
Q psy3710 310 RDSSYLCVSSDHGTV-HVFSVD 330 (424)
Q Consensus 310 ~~~~~l~~~~~d~~i-~iw~~~ 330 (424)
| .++++++.++.. .||.+.
T Consensus 311 ~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 311 E--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp S--SEEEEEECSSSCCEEEEES
T ss_pred C--cEEEEEcCCCChHHheEeC
Confidence 4 566677766654 677765
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.5e-14 Score=123.77 Aligned_cols=221 Identities=14% Similarity=0.199 Sum_probs=154.6
Q ss_pred eeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc------cccCCeEEEEE-ccCCCEEEEEec-CCcEEEEEE
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA------AHEAPLSCIAL-NQTGTRLATASY-KGTLIRVFD 214 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-d~~~i~iwd 214 (424)
....++++++++++++ ...++.|.+||... .....+. ++...+..+++ .++++.+++... ++. |.+||
T Consensus 31 ~p~~v~~~~~g~l~v~-~~~~~~i~~~d~~g--~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~-i~~~d 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVA-DTNNHRIQIFDKEG--RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ-IQIYN 106 (286)
T ss_dssp CEEEEEECTTCCEEEE-EGGGTEEEEECTTS--CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE-EEEEC
T ss_pred CCceEEECCCCCEEEE-ECCCCEEEEECCCC--cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE-EEEEC
Confidence 3667888999987776 78899999999874 3333332 34467899999 467766666543 788 99999
Q ss_pred CCCcceeeEEec----ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec--cCCCCeEEEEEcCCCCEEEEEe
Q psy3710 215 TGSGQKLNELRR----GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA--AHEAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 215 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 288 (424)
.+++.+..+.. ....+++++++. ++++...++.|++||.... ....+. .+...+..++++|+|+++++..
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC--EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 56777766642 356788899886 5555677899999996532 222332 3456789999999999888877
Q ss_pred CCCcEEEEEECCCCceeee--------------eccCCcEEEEEeCCC-cEEEEEccccccccccccceeeeccCccccC
Q psy3710 289 YKGTLIRVFDTGSGQKLNE--------------LRRDSSYLCVSSDHG-TVHVFSVDEAQKINKQSSLASASFLPKYFSS 353 (424)
Q Consensus 289 ~d~~~i~iwd~~~~~~~~~--------------~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (424)
.++. |++||.. ++.+.. +.++|+++++...++ .|.+|+.. ++.+.....
T Consensus 183 ~~~~-i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~------------- 246 (286)
T 1q7f_A 183 RAHC-VKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALES------------- 246 (286)
T ss_dssp GGTE-EEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEE-------------
T ss_pred CCCE-EEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcc-------------
Confidence 8888 9999975 333332 346788888887776 99999954 343322111
Q ss_pred CceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecC
Q psy3710 354 SWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
......+..++++|+|+.+++ +.|+.|++|++..
T Consensus 247 -------~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 247 -------KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -------SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -------cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 001123567899999976555 6799999999863
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=2.2e-14 Score=123.38 Aligned_cols=203 Identities=10% Similarity=-0.026 Sum_probs=138.7
Q ss_pred ccccCCceEEEEECCCCC-eeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 6 SSTYKNGLLYAGFNQDQG-CFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~-~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
+..+.....+++|+|+|+ +++++..++ |..|+.+++ ......+...+..+.+.++++.+++.. .++.|.
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~-------~~~~i~ 93 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSH-------GLRRLE 93 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEET-------TTTEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEec-------CCCeEE
Confidence 445667788999999998 666776655 999998876 333444567788899999998766554 257999
Q ss_pred EEECCCCcEEEEEee-----cCCeEEEEecCCceEEEee---c---------------cEEEEeecCCCceeEEEeeCCC
Q psy3710 84 IWDDLKKQVVICLEF-----NAPVKGVRLRRDKIVVVLE---G---------------LIKVYTFIQCPQQLHVFETNPN 140 (424)
Q Consensus 84 iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~---~---------------~i~v~~~~~~~~~~~~~~~~~~ 140 (424)
+||..+++....... ...+..++++|++.+++++ + .-.||.+...++ ...+....
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~- 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDR- 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCC-
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCC-
Confidence 999988886544331 2356789999999877753 2 125666543333 33333322
Q ss_pred CCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCC---CcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCC
Q psy3710 141 PKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP---PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS 217 (424)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~ 217 (424)
.....++++|+++.+++ ...++.|.+|++...... ...+..+...+..++++++|+++++. ++. |.+||..
T Consensus 172 -~~~~gi~~s~dg~~lv~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~- 245 (296)
T 3e5z_A 172 -VKPNGLAFLPSGNLLVS-DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD- 245 (296)
T ss_dssp -SSEEEEEECTTSCEEEE-ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-
T ss_pred -CCCccEEECCCCCEEEE-eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-
Confidence 33567899999999944 888899999998732122 12223345566789999999866655 677 9999975
Q ss_pred cceeeEEe
Q psy3710 218 GQKLNELR 225 (424)
Q Consensus 218 ~~~~~~~~ 225 (424)
++.+..+.
T Consensus 246 g~~~~~~~ 253 (296)
T 3e5z_A 246 GDELGRVL 253 (296)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 55555443
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=1.7e-14 Score=139.50 Aligned_cols=276 Identities=9% Similarity=-0.071 Sum_probs=178.7
Q ss_pred CCCCeeEeec-CCe---EEEEe--CCcCcccccc---c---ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEEC
Q psy3710 20 QDQGCFACGM-EDG---FRIYN--CDPLKEKERQ---D---FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD 87 (424)
Q Consensus 20 ~~g~~la~g~-~~~---i~iw~--~~~~~~~~~~---~---~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~ 87 (424)
|+|++++... ..+ -.+|- ...++..... . .+...+..++|+|+++++++...... ....+|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G--~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG--SDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT--CSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC--CceEEEEEEEC
Confidence 8998888443 221 24444 3333321111 1 12235788999999999998763210 01238999999
Q ss_pred CCCcEEEEEeecCCeEEEEecCCceEEEe---ecc----------------EEEEeecCCCce--eEEEeeCCCCCeeEE
Q psy3710 88 LKKQVVICLEFNAPVKGVRLRRDKIVVVL---EGL----------------IKVYTFIQCPQQ--LHVFETNPNPKGLCV 146 (424)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~----------------i~v~~~~~~~~~--~~~~~~~~~~~~~~~ 146 (424)
.+++.+........+..++|+||+..++. ++. |++|++. +++. ...+....++.....
T Consensus 159 ~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~~v~~~~~~~~~~~~ 237 (710)
T 2xdw_A 159 DGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQSEDILCAEFPDEPKWMGG 237 (710)
T ss_dssp TTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT-SCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC-CCcccceEEeccCCCCeEEEE
Confidence 99988764433334778999999976664 433 9999986 4432 223333333445678
Q ss_pred EeecCCCCeEEEeecc----CCeEEEEeCCC------CCCCCcccccccCCeEEEEEccCCCEEEEEec----CCcEEEE
Q psy3710 147 LCPNSNNSLLAFPGRK----SGHVHLVDLAD------PERPPLDIAAHEAPLSCIALNQTGTRLATASY----KGTLIRV 212 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~----dg~i~i~d~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~~i~i 212 (424)
+.++|||++|+++... +..|.+||+.+ +......+..+...+.. .|+|+|+.|+..+. ... |.+
T Consensus 238 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~-l~~ 315 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR-LIN 315 (710)
T ss_dssp EEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE-EEE
T ss_pred EEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE-EEE
Confidence 8999999999883321 57899999986 42345666666666655 48899988877654 236 999
Q ss_pred EECCCcce--eeEEecc-----eeeeeecCCCCeEEEEeecCCe--EEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCE
Q psy3710 213 FDTGSGQK--LNELRRG-----LCVLCPNSNNSLLAFPGRKSGH--VHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR 283 (424)
Q Consensus 213 wd~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 283 (424)
||+.++.. ...+..+ +..++++ ++..++++...++. |++||+.+++ ....+..+...+..++++|+++.
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~~~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFPLEVGSVVGYSGQKKDTE 393 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCC-EEEEECCCSSEEEEEECCTTCSE
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCC-EEEecCCCCceEEEEecCCCCCE
Confidence 99987642 2333222 3345565 45667777888884 5667775554 23445566778899999999876
Q ss_pred EEEEe----CCCcEEEEEECCCCc
Q psy3710 284 LATAS----YKGTLIRVFDTGSGQ 303 (424)
Q Consensus 284 l~~~~----~d~~~i~iwd~~~~~ 303 (424)
++... ..+. |.+||+.+++
T Consensus 394 l~~~~ss~~~P~~-i~~~d~~tg~ 416 (710)
T 2xdw_A 394 IFYQFTSFLSPGI-IYHCDLTKEE 416 (710)
T ss_dssp EEEEEECSSCCCE-EEEEETTSSS
T ss_pred EEEEEeCCCCCCE-EEEEECCCCc
Confidence 66432 2467 9999998877
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=1.6e-13 Score=120.07 Aligned_cols=245 Identities=10% Similarity=0.006 Sum_probs=163.1
Q ss_pred ccccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
+.++...+.+++|+|+|++++++..++ |.+||.++++.......+...+..+.+.++++.+++..... ...+.|.+
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~---~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF---KSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS---SSCCEEEE
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC---CCCceEEE
Confidence 445667789999999999877777666 99999887765433323456788999999998766654210 00158999
Q ss_pred EECCCCcEEEEEe---ecCCeEEEEecCCceEEEeec-------cEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCC
Q psy3710 85 WDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVLEG-------LIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNS 154 (424)
Q Consensus 85 wd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~-------~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (424)
||.++++....+. ....+.+++++|++.+++++. ...+|.+.........+.... .....++++|+++
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--SVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--SSEEEEEECTTSS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--CcccceEECCCCC
Confidence 9998877654333 245689999999997766522 344555432322233332221 2256788999998
Q ss_pred eEEEeeccCCeEEEEeCCCCCCCCcc--------cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec
Q psy3710 155 LLAFPGRKSGHVHLVDLADPERPPLD--------IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 226 (424)
Q Consensus 155 ~l~~~~~~dg~i~i~d~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 226 (424)
.++++...++.|.+||+.+....... +.++ ..+..++++++|+++++...++. |.+||. +++.+..+..
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILI 271 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEEC
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEc
Confidence 77664667899999999642122211 1122 36788999999998887777788 999998 5666666653
Q ss_pred ---------ceeeeeecCCCCeEEEEeecC-----CeEEEEeCCCC
Q psy3710 227 ---------GLCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADP 258 (424)
Q Consensus 227 ---------~~~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~ 258 (424)
....+++++++..+++++... +.|..+++...
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSC
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccC
Confidence 256678888887777755442 35666666543
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.69 E-value=3e-13 Score=116.29 Aligned_cols=275 Identities=10% Similarity=-0.038 Sum_probs=181.5
Q ss_pred ccccCCceEEEEECCCCCeeEeecCC-eEEEEeCCcCccccc-ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 6 SSTYKNGLLYAGFNQDQGCFACGMED-GFRIYNCDPLKEKER-QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 6 l~~h~~~V~~~~~s~~g~~la~g~~~-~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
+..+...+.+++++++|+++++...+ +|.+||.+ ++.... ...+...+..+.+.+++...++.. .++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTEN-------AANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCC-------CCCeEE
Confidence 44566789999999999987776644 49999987 443221 112345678888888887666544 257899
Q ss_pred EEECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEE
Q psy3710 84 IWDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLA 157 (424)
Q Consensus 84 iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (424)
.||.. ++. ..+. ....+.++++.+++.+.++ ++.|.+||. +++.. .+...........+++++++..++
T Consensus 82 ~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~--~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 82 RITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD--DGKIR-EYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp EECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT--TCCEE-EEECSSTTCCEEEEEECTTSCEEE
T ss_pred EECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC--CCCEE-EecCCCCCCCCceEEEcCCCCEEE
Confidence 99975 443 3333 2457899999998866655 468888886 23322 222222223467888999998777
Q ss_pred EeeccCCeEEEEeCCCCCCCCc-ccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeE-Ee---cceeeee
Q psy3710 158 FPGRKSGHVHLVDLADPERPPL-DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-LR---RGLCVLC 232 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-~~---~~~~~~~ 232 (424)
+ ...++.|..||. ++ .... ....+...+..++++++|+..++...++. |..||. +++.... .. .....++
T Consensus 157 ~-~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~ 231 (299)
T 2z2n_A 157 T-ENQNNAIGRITE-SG-DITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEITEFKIPTPNARPHAIT 231 (299)
T ss_dssp E-ETTTTEEEEECT-TC-CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred E-eCCCCEEEEEcC-CC-cEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEEEEECCCCCCCceeEE
Confidence 5 666789999998 43 2221 12334456889999999987776666778 999999 6654321 22 2256778
Q ss_pred ecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 233 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 233 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
+++++. ++++...++.|..||.. +......+..+...+.++++ ++|+++++.+ .+. +..++.++++
T Consensus 232 ~~~~g~-l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~-l~~~~~~~~~ 297 (299)
T 2z2n_A 232 AGAGID-LWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDK-IGKLTLIKDN 297 (299)
T ss_dssp ECSTTC-EEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTE-EEEEEEC---
T ss_pred ECCCCC-EEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCc-EEEEEcCccc
Confidence 888876 55545577899999983 32111112344567899999 8887766655 455 7778876553
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=7.6e-14 Score=119.98 Aligned_cols=217 Identities=11% Similarity=0.060 Sum_probs=151.9
Q ss_pred eeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceee
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN 222 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~ 222 (424)
....++|+|+++.++.++..++.|..||..++ ...+..+...+.+++++|+|+++++...++. |.+||..+++...
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~-i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRR-LERQREPGGEWES 104 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTE-EEEECSTTCCEEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCe-EEEEcCCCCcEEE
Confidence 35678999999844444889999999999863 5566667788999999999998877777788 9999998876543
Q ss_pred EEec-------ceeeeeecCCCCeEEEE---ee-------------cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcC
Q psy3710 223 ELRR-------GLCVLCPNSNNSLLAFP---GR-------------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQ 279 (424)
Q Consensus 223 ~~~~-------~~~~~~~~~~~~~~~~~---~~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 279 (424)
.... ....+++++++..++.. |+ ..+.|..++.. ++ ...+..+......++|+|
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~ 181 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIRDRVKPNGLAFLP 181 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEECCCSSEEEEEECT
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeecCCCCCccEEECC
Confidence 3221 13457888988755432 22 13567777665 22 333445667789999999
Q ss_pred CCCEEEEEeCCCcEEEEEECC-CCce---ee------------eeccCCcEEEEEeCCCcEEEEEcccccccccccccee
Q psy3710 280 TGTRLATASYKGTLIRVFDTG-SGQK---LN------------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLAS 343 (424)
Q Consensus 280 ~~~~l~~~~~d~~~i~iwd~~-~~~~---~~------------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 343 (424)
+++.+++.+.++. |.+|++. +++. .. .+.++|+++++. ++.|.+|+.. ++.+..
T Consensus 182 dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~------ 251 (296)
T 3e5z_A 182 SGNLLVSDTGDNA-THRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR------ 251 (296)
T ss_dssp TSCEEEEETTTTE-EEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE------
T ss_pred CCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE------
Confidence 9999877777788 9999987 4544 12 244677766665 7889999976 443322
Q ss_pred eeccCccccCCceeeEEeecCCCceEEEE-ecCCCeEEEEeccCcEEEEEecCC
Q psy3710 344 ASFLPKYFSSSWSFCKFQIPSDPPCICAF-GADSNSIIVICADGSYYKFMFNSK 396 (424)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~l~~~~~dg~v~~~~~~~~ 396 (424)
+..+.. +..++| +|+++.|++++.++ +|.++..
T Consensus 252 ----------------~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~~~ 285 (296)
T 3e5z_A 252 ----------------VLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIETN 285 (296)
T ss_dssp ----------------EECSSC-CCEEEEESTTSCEEEEEETTE---EEEEECS
T ss_pred ----------------EECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEEcc
Confidence 333444 678899 58999999988763 4444433
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.69 E-value=1.1e-13 Score=122.19 Aligned_cols=248 Identities=12% Similarity=0.022 Sum_probs=165.4
Q ss_pred cEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec---------cCCeEEEEeCCCCCCCCcccccc-----
Q psy3710 119 LIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR---------KSGHVHLVDLADPERPPLDIAAH----- 184 (424)
Q Consensus 119 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~dg~i~i~d~~~~~~~~~~~~~~----- 184 (424)
.|.+||.. +++.+..+..... . .+.++||+++++++.. .++.|.+||..+. +.+..+...
T Consensus 48 ~v~v~D~~-t~~~~~~i~~g~~---p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~-~~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAG-SGSILGHVNGGFL---P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-LPIADIELPDAPRF 121 (373)
T ss_pred EEEEEECC-CCeEEEEecCCCC---C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC-cEEEEEECCCcccc
Confidence 78999986 6777766665432 2 6789999999998332 3678999999875 333333211
Q ss_pred --cCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeE-EecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCC
Q psy3710 185 --EAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNE-LRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 185 --~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 259 (424)
......++|+|||++|+.+.. ++. |.++| .+++.+.. ++.+.. ..+.+.+...+++.+.||.+.++|. +++
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~~~~~-v~viD-~t~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFAAGPA-VGLVV-QGGSSDDQLLSSPTC-YHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecCCCCe-EEEEE-CCCCEEeEEcCCCce-EEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 123468999999999998874 467 99999 99998888 765433 4456777666777888999999999 655
Q ss_pred CCCeee----ccCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce------------------------eeeecc
Q psy3710 260 RPPLDI----AAHEAP-LSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------------------------LNELRR 310 (424)
Q Consensus 260 ~~~~~~----~~~~~~-v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------------------------~~~~~~ 310 (424)
...... .....+ .....+.+++..++..+..+. +.+.|+.++.. ...+++
T Consensus 198 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 198 AAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred EEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 321100 011122 233456776665555556777 88888864421 123456
Q ss_pred CCcEEEEEeC----------CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC-eE
Q psy3710 311 DSSYLCVSSD----------HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN-SI 379 (424)
Q Consensus 311 ~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l 379 (424)
+++.+.++.. ++.|.++|+.+++.+.++.. .+....++|+|||+ .+
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-----------------------g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-----------------------GHDVDAISVAQDGGPDL 333 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-----------------------CCCcCeEEECCCCCeEE
Confidence 6666666543 35788899888776544321 12345889999999 77
Q ss_pred EEEe-ccCcEEEEEecCCcceee
Q psy3710 380 IVIC-ADGSYYKFMFNSKGECWR 401 (424)
Q Consensus 380 ~~~~-~dg~v~~~~~~~~~~~~~ 401 (424)
+++. .++.|.++|.. +++.++
T Consensus 334 ~v~~~~~~~V~ViD~~-t~~vv~ 355 (373)
T 2mad_H 334 YALSAGTEVLHIYDAG-AGDQDQ 355 (373)
T ss_pred EEEcCCCCeEEEEECC-CCCEEe
Confidence 7776 48999999987 555544
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=1.3e-14 Score=126.47 Aligned_cols=247 Identities=12% Similarity=0.053 Sum_probs=171.7
Q ss_pred CCCeEEEEECCCCcEEEEEe-------ecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEe
Q psy3710 78 PNNRVMIWDDLKKQVVICLE-------FNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLC 148 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (424)
.++.|.++|.++++....+. .......+.+..+..+++. ++.|.+||.. +.+.+..+... .....++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~-t~~~~~~i~~~---~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDIN-TFKEVGRITGF---TSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETT-TCCEEEEEECC---SSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECc-ccEEEEEcCCC---CCCcEEE
Confidence 37899999999998876542 2345678888777777776 6899999996 77777777533 3356677
Q ss_pred ecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccccc-----CCeEEEEEccCCCEEEEEe--cCCcEEEEEECCCccee
Q psy3710 149 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE-----APLSCIALNQTGTRLATAS--YKGTLIRVFDTGSGQKL 221 (424)
Q Consensus 149 ~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~~i~iwd~~~~~~~ 221 (424)
++++++ +.++...++.|.+||..+. +....+.... .....+++ . +..++.+. .++. |.++|..+++.+
T Consensus 91 ~~~~g~-lyv~~~~~~~v~~iD~~t~-~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~-v~viD~~t~~~~ 165 (328)
T 3dsm_A 91 FLSDEK-AYVTQIWDYRIFIINPKTY-EITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNR-ILKIDTETDKVV 165 (328)
T ss_dssp EEETTE-EEEEEBSCSEEEEEETTTT-EEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCE-EEEEETTTTEEE
T ss_pred EeCCCe-EEEEECCCCeEEEEECCCC-eEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCE-EEEEECCCCeEE
Confidence 878884 5542447899999999875 3333333222 14556777 3 44555554 4788 999999999888
Q ss_pred eEEecc--eeeeeecCCCCeEEEEeec---------CCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEEeC
Q psy3710 222 NELRRG--LCVLCPNSNNSLLAFPGRK---------SGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 222 ~~~~~~--~~~~~~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
..+..+ ...+++++++..++.+... .+.|.++|..+.+. ...+.. .......++|+|+++.|+++..
T Consensus 166 ~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 166 DELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV-EKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE-EEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE-EEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 777643 4567888888755443222 37999999987652 222222 1346899999999999988766
Q ss_pred CCcEEEEEECCCCceee--------------eecc-CCcEEEEE----eCCCcEEEEEcccccccccc
Q psy3710 290 KGTLIRVFDTGSGQKLN--------------ELRR-DSSYLCVS----SDHGTVHVFSVDEAQKINKQ 338 (424)
Q Consensus 290 d~~~i~iwd~~~~~~~~--------------~~~~-~~~~l~~~----~~d~~i~iw~~~~~~~~~~~ 338 (424)
. |.+||..+++... .+.| ++.++++. ..++.|.+||.. ++.+.+.
T Consensus 245 --~-v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 245 --D-IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp --S-EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred --E-EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 6 9999998876431 2456 45566665 568899999998 6765543
No 190
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=2.4e-13 Score=118.40 Aligned_cols=281 Identities=13% Similarity=0.067 Sum_probs=185.9
Q ss_pred EEECCCCCeeEeecC-----Ce-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcC--CC-cCCCeEEEEE
Q psy3710 16 AGFNQDQGCFACGME-----DG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTH--PK-YPNNRVMIWD 86 (424)
Q Consensus 16 ~~~s~~g~~la~g~~-----~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~--~~-~~d~~i~iwd 86 (424)
....|+++.+.+... ++ |.++|..+++.+........+ .+.++|+++.++++..... .. -.++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 456799988887654 34 999999998886555443444 4999999999887752000 00 0147899999
Q ss_pred CCCCcEEEEEeecC--------CeEEEEecCCceEEEe-----eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCC
Q psy3710 87 DLKKQVVICLEFNA--------PVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 87 ~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (424)
..+++.+.++.... ....++++||+..+.. ++.|.++|+. +.+.+.++.... +. ..+....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~-t~~vv~tI~v~g----~~-~~~P~g~ 189 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE-GKAFKRMLDVPD----CY-HIFPTAP 189 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEECCS----EE-EEEEEET
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC-CCcEEEEEECCC----cc-eeecCCC
Confidence 99999999987432 5678999999975543 4689999997 788888775432 11 1111223
Q ss_pred CeEEEeeccCCeEEEEeCCCCCCCCc----ccccccCCeE-EEEEc-cCCCEEEEEecCCcEEEEEECCCcc--eeeEEe
Q psy3710 154 SLLAFPGRKSGHVHLVDLADPERPPL----DIAAHEAPLS-CIALN-QTGTRLATASYKGTLIRVFDTGSGQ--KLNELR 225 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~v~-~~~~~-~~~~~l~~~~~d~~~i~iwd~~~~~--~~~~~~ 225 (424)
+.+++ .+.||.+.+.++....+... .+..-..++. ...|. ++|++++ .+.++. |++.|+.+.. ....+.
T Consensus 190 ~~~~~-~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 190 DTFFM-HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp TEEEE-EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCEECCCEE
T ss_pred ceeEE-ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcceeeccee
Confidence 34443 56677777777765212211 1111112221 23554 5775444 566888 9999997654 333332
Q ss_pred -------------cceeeeeecCCCCeEEEEeec---------CCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-
Q psy3710 226 -------------RGLCVLCPNSNNSLLAFPGRK---------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT- 282 (424)
Q Consensus 226 -------------~~~~~~~~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 282 (424)
.+...++++++++.++++... .++|.++|+.+.+.......+ ..+..|+++||++
T Consensus 267 ~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~ 344 (386)
T 3sjl_D 267 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKP 344 (386)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSC
T ss_pred ccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCe
Confidence 234557888999988886432 357999999997753333223 3688999999997
Q ss_pred EEEEEe-CCCcEEEEEECCCCceeeeecc
Q psy3710 283 RLATAS-YKGTLIRVFDTGSGQKLNELRR 310 (424)
Q Consensus 283 ~l~~~~-~d~~~i~iwd~~~~~~~~~~~~ 310 (424)
+|+++. .++. |.++|..+++.+.++.-
T Consensus 345 ~ly~tn~~~~~-VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 345 LLYALSTGDKT-LYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEEETTTTE-EEEEETTTCCEEEEECC
T ss_pred EEEEEcCCCCe-EEEEECCCCcEEEEecC
Confidence 666654 4778 99999999999998763
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=1.2e-14 Score=140.15 Aligned_cols=255 Identities=9% Similarity=-0.055 Sum_probs=157.3
Q ss_pred ccCCceEEEEECCCCCeeE-----eecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCe
Q psy3710 8 TYKNGLLYAGFNQDQGCFA-----CGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR 81 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la-----~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~ 81 (424)
+|...+..++|||||++|| .|+++. |++||+++++.+............++|+|+++.+++++.. ..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d-------~~ 190 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLP-------TD 190 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECC-------CC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEec-------CC
Confidence 5666799999999999999 344444 9999999887651111112222679999999999988842 21
Q ss_pred EEEEECCCCcEEEEEeecCCeEEEEecCCceEEEeeccEEEEeecCCCc--eeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 82 VMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQ--QLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
..+.. .. . .....|++|++. ++. ....+....++..+..+.++|||++|++
T Consensus 191 ------~~~~~------~~--------~-----~~~~~v~~~~l~-t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~- 243 (695)
T 2bkl_A 191 ------PSIKV------DE--------R-----PGYTTIRYHTLG-TEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFV- 243 (695)
T ss_dssp ------TTSCG------GG--------G-----GGGCEEEEEETT-SCGGGCEEEECCCCCTTCEEEEEECTTSCCEEE-
T ss_pred ------CCCcc------cc--------C-----CCCCEEEEEECC-CCchhceEEEecCCCCEEEEEEEECCCCCEEEE-
Confidence 00000 00 0 002345566654 222 1122233233345678899999999988
Q ss_pred eccCC----eEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec----CCcEEEEEECCCcce---eeEEec--
Q psy3710 160 GRKSG----HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY----KGTLIRVFDTGSGQK---LNELRR-- 226 (424)
Q Consensus 160 ~~~dg----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~~i~iwd~~~~~~---~~~~~~-- 226 (424)
++.++ .|.+++..+ .....+..+...+....+ ++|+ ++..+. ++. |.+||+.+++. ...+..
T Consensus 244 ~~~~~~~~~~l~~~~~~~--~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~-l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 244 YILRGWSENDVYWKRPGE--KDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQR-VFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp EEEETTTEEEEEEECTTC--SSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCE-EEEEBTTBCSGGGCEEEECCCS
T ss_pred EEeCCCCceEEEEEcCCC--CceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCE-EEEEeCCCCCccCCeEEecCCC
Confidence 44444 666666544 345556666666777777 5666 554443 467 99999987653 222222
Q ss_pred c--eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccC-CCCeEEEEEcCCCCEEEEEe----CCCcEEEEEEC
Q psy3710 227 G--LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH-EAPLSCIALNQTGTRLATAS----YKGTLIRVFDT 299 (424)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~----~d~~~i~iwd~ 299 (424)
. +..++++ +..++++...++..++|.+.........+..+ ...+..++++|+++.++... ..+. |++||+
T Consensus 319 ~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-v~~~d~ 395 (695)
T 2bkl_A 319 SASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ-IYKTSV 395 (695)
T ss_dssp SCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE-EEEEET
T ss_pred CCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE-EEEEEC
Confidence 1 3344554 66788889999988887665222223334334 56778889999988776333 3466 999999
Q ss_pred CCCce
Q psy3710 300 GSGQK 304 (424)
Q Consensus 300 ~~~~~ 304 (424)
.+++.
T Consensus 396 ~~g~~ 400 (695)
T 2bkl_A 396 STGKS 400 (695)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 88764
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=4.9e-14 Score=136.29 Aligned_cols=248 Identities=13% Similarity=0.095 Sum_probs=166.4
Q ss_pred ccCCceEEEEECCCCCeeEeecC-C-----eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCC-----
Q psy3710 8 TYKNGLLYAGFNQDQGCFACGME-D-----GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPK----- 76 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g~~-~-----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~----- 76 (424)
+|...+..++|||||++||.+.+ + .|++||+++++..... .....+..++|+||++.+++++......
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 35557889999999999995432 1 3999999988775422 2223366799999999999988432100
Q ss_pred ----cCCCeEEEEECCCCcE--EEEEe---ecCCeEEEEecCCceEEEe--------eccEEEEeecCC-----Cc-eeE
Q psy3710 77 ----YPNNRVMIWDDLKKQV--VICLE---FNAPVKGVRLRRDKIVVVL--------EGLIKVYTFIQC-----PQ-QLH 133 (424)
Q Consensus 77 ----~~d~~i~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~~~~--------~~~i~v~~~~~~-----~~-~~~ 133 (424)
.....|++|++.+++. ...+. +...+..+.|+||+..++. +..|.+||+... +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 0123599999988762 12222 2445789999999977664 247899998630 22 345
Q ss_pred EEeeCCCCCeeEEEeecCCCCeEEEeecc---CCeEEEEeCCCCCC-CCcccccccC--CeEEEEEccCCCEEEEEecCC
Q psy3710 134 VFETNPNPKGLCVLCPNSNNSLLAFPGRK---SGHVHLVDLADPER-PPLDIAAHEA--PLSCIALNQTGTRLATASYKG 207 (424)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---dg~i~i~d~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~ 207 (424)
.+..+... ... .++++|+.|++.+.. .+.|.+||+.++.. ....+..|.. .+..++|++++.++++...++
T Consensus 281 ~l~~~~~~--~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 281 KLIDNFEG--EYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEECSSSS--CEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred EeeCCCCc--EEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 55554433 222 467888888874443 34799999987521 2244445544 688899997777888888887
Q ss_pred c-EEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEee---cCCeEEEEeCCCCC
Q psy3710 208 T-LIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGR---KSGHVHLVDLADPE 259 (424)
Q Consensus 208 ~-~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~dg~i~i~d~~~~~ 259 (424)
. .|.+||+.+++.+..+..+ +..+++++++..++++.+ ..++|+.||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4 1667787777766666543 455677888888877544 35789999998765
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=6e-13 Score=117.53 Aligned_cols=276 Identities=11% Similarity=0.014 Sum_probs=181.2
Q ss_pred EECCCCCeeEeecC--C----eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcC---CCcCCCeEEEEEC
Q psy3710 17 GFNQDQGCFACGME--D----GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTH---PKYPNNRVMIWDD 87 (424)
Q Consensus 17 ~~s~~g~~la~g~~--~----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~---~~~~d~~i~iwd~ 87 (424)
...|+++++.+... . .|.+||..+++.+..... +....+.++|+++.++++..... ....++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--CCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 45578877665442 2 579999988877544333 22238999999999988752100 0002578999999
Q ss_pred CCCcEEEEEeec--------CCeEEEEecCCceEEEe-----eccEEEEeecCCCceeEE-EeeCCCCCeeEEEeecCCC
Q psy3710 88 LKKQVVICLEFN--------APVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHV-FETNPNPKGLCVLCPNSNN 153 (424)
Q Consensus 88 ~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 153 (424)
.+.+.+.++... .....++++||+..+.. ++.|.++| . +++.+.. +.... . +.+.|++
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~-t~~~~~~~i~~~~----~--~~~~~~~ 176 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q-GGSSDDQLLSSPT----C--YHIHPGA 176 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C-CCCEEeEEcCCCc----e--EEEEeCC
Confidence 999988887643 34568999999976654 36799999 6 7777666 54322 1 2334455
Q ss_pred CeEEEeeccCCeEEEEeCCCCCCCCcccc-----cccCC-eEEEEEccCCCEEEEEecCCcEEEEEECCCcc--eeeEEe
Q psy3710 154 SLLAFPGRKSGHVHLVDLADPERPPLDIA-----AHEAP-LSCIALNQTGTRLATASYKGTLIRVFDTGSGQ--KLNELR 225 (424)
Q Consensus 154 ~~l~~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~--~~~~~~ 225 (424)
+..+++.+.||.+.++|. ++ +...... ....+ .....+.+++..++..+..+. +.+.|+.+.. .+..+.
T Consensus 177 ~~~~~~~~~dg~~~~vd~-~g-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~ 253 (373)
T 2mad_H 177 PSTFYLLCAQGGLAKTDH-AG-GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPID 253 (373)
T ss_pred CceEEEEcCCCCEEEEEC-CC-cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeeee
Confidence 444333678999999999 65 3221111 11122 123456676666555556777 9999997553 222221
Q ss_pred -------------cceeeeeecCCCCeEEEEee---------cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-
Q psy3710 226 -------------RGLCVLCPNSNNSLLAFPGR---------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT- 282 (424)
Q Consensus 226 -------------~~~~~~~~~~~~~~~~~~~~---------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 282 (424)
.+...+.++++++.++++.. .++.|.++|+.+.+. ...+. -.....+++|+|||+
T Consensus 254 ~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v-v~~i~-~g~~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 254 ALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT-SSQIS-LGHDVDAISVAQDGGP 331 (373)
T ss_pred ecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE-EEEEE-CCCCcCeEEECCCCCe
Confidence 12334778999888887543 246899999988763 33332 233688999999999
Q ss_pred EEEEEe-CCCcEEEEEECCCCceeeee
Q psy3710 283 RLATAS-YKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 283 ~l~~~~-~d~~~i~iwd~~~~~~~~~~ 308 (424)
+++++. .++. |.++|+.+++.+.++
T Consensus 332 ~l~v~~~~~~~-V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 332 DLYALSAGTEV-LHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEEcCCCCe-EEEEECCCCCEEeee
Confidence 777777 4788 999999999998874
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=1.9e-13 Score=115.58 Aligned_cols=190 Identities=11% Similarity=-0.016 Sum_probs=144.8
Q ss_pred CCCeeEeecCCe-EEEEeCCcCcccccccccC-CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEee
Q psy3710 21 DQGCFACGMEDG-FRIYNCDPLKEKERQDFTD-GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF 98 (424)
Q Consensus 21 ~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 98 (424)
.+++|++++.++ |.+||.++++.+.....+. ..+..+.++|+++.++ .. ++.|..||. +|+.+.++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~--------~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY--------SKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC--------BSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC--------CCCEEEECC-CCCEEEEEcC
Confidence 457788888778 9999998999877666544 4678899999999887 22 578999999 8999999984
Q ss_pred c--CCeEEEEecCCceEEEe-ec-cEEEEeecCCCceeEEEeeCCCC----CeeEEEeecCCCCeEEEeeccCCeEEEEe
Q psy3710 99 N--APVKGVRLRRDKIVVVL-EG-LIKVYTFIQCPQQLHVFETNPNP----KGLCVLCPNSNNSLLAFPGRKSGHVHLVD 170 (424)
Q Consensus 99 ~--~~v~~~~~~~~~~~~~~-~~-~i~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~dg~i~i~d 170 (424)
. ..+.++.+.+++.++++ .+ .-+++-++.+++.+..+...... .....+++.++|+++++ ...++.|..||
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~-~~~~~~v~~~d 152 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATSEVREIA 152 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE-ETTTTEEEEEC
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE-ecCCCEEEEEC
Confidence 3 57889999999988876 33 45555554567777776542210 11223456889999987 88999999999
Q ss_pred CCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe
Q psy3710 171 LADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225 (424)
Q Consensus 171 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 225 (424)
.+ + +.+..+... ....++...++|+.++++..++. |..+|..+++.+.++.
T Consensus 153 ~~-G-~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 153 PN-G-QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVN 203 (276)
T ss_dssp TT-S-CEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEE
T ss_pred CC-C-CEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEec
Confidence 87 5 566666544 45667888899999999888888 9999999899887775
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.1e-13 Score=116.94 Aligned_cols=225 Identities=12% Similarity=0.088 Sum_probs=158.9
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCccccccc-CCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE-APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG--- 227 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~--- 227 (424)
.++.|++ ++.++.|.+||.+++ +.+..+..+. ..+.+++++|+|+.++ +.++. |..||. +++.+.++..+
T Consensus 4 ~~~~lv~-~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~-V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVG-GSGWNKIAIINKDTK-EIVWEYPLEKGWECNSVAATKAGEILF--SYSKG-AKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEE-CTTCSEEEEEETTTT-EEEEEEECCTTCCCCEEEECTTSCEEE--ECBSE-EEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEe-eCCCCEEEEEECCCC-eEEEEeCCCccCCCcCeEECCCCCEEE--eCCCC-EEEECC-CCCEEEEEcCCCCc
Confidence 3566776 999999999999887 6666776665 4789999999999888 34677 999999 89988888753
Q ss_pred -eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 228 -LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+....+.+++..++.....++.+..+|.. ++ .+..+. .+......+++.++|+++++...++. |..||.+
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk-~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~ 154 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMK-GE-VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN 154 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTT-SC-EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCC-CC-EEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC
Confidence 45567788888877633337788888763 33 122211 12234556688999999999999999 9999998
Q ss_pred CCceeeeec-----------cCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceE
Q psy3710 301 SGQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCI 369 (424)
Q Consensus 301 ~~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (424)
|+.+.++. ++|.++++++.++.|..+|..+|+.+-+...... +. . ....+..
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~----~~----~--------~l~~~~~ 217 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI----EG----V--------QLFFVAQ 217 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS----BS----C--------CCSEEEE
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC----CC----c--------ccccccc
Confidence 99888764 4788888888888999999998876544321100 00 0 0011446
Q ss_pred EEEecCCCeEEEEecc--------CcEEEEEecCCcceeee
Q psy3710 370 CAFGADSNSIIVICAD--------GSYYKFMFNSKGECWRD 402 (424)
Q Consensus 370 ~~~s~~~~~l~~~~~d--------g~v~~~~~~~~~~~~~~ 402 (424)
++..++|+.+++.... +..++++++++++++-+
T Consensus 218 ~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 218 LFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp EEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred ceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 6777888877765311 24578888777776543
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.62 E-value=3.7e-13 Score=113.95 Aligned_cols=235 Identities=9% Similarity=-0.074 Sum_probs=146.1
Q ss_pred ceEEEEECCCCCeeE-eecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 12 GLLYAGFNQDQGCFA-CGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 12 ~V~~~~~s~~g~~la-~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
...+++++++|++++ +...++ |.+|+..+.........+......+++.++++.+++.. ++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~--------~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF--------NNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET--------TTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC--------CCEEEEEeCCC
Confidence 678999999998776 534444 99999765543222222234567789999888444332 47999999866
Q ss_pred CcEEEEEe--ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCC
Q psy3710 90 KQVVICLE--FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSG 164 (424)
Q Consensus 90 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg 164 (424)
+... .+. ....+.++++.+++.+.++ ++.|.+|+.. ....... ..........++++++++++++ ...++
T Consensus 97 ~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~-~~~~~ 171 (270)
T 1rwi_B 97 NNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAG-SKTQTVL--PFTGLNDPDGVAVDNSGNVYVT-DTDNN 171 (270)
T ss_dssp SCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTT-CCSCEEC--CCCSCCSCCCEEECTTCCEEEE-EGGGT
T ss_pred ceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECC-CceeEee--ccccCCCceeEEEeCCCCEEEE-ECCCC
Confidence 5433 232 2357899999999876665 5678888753 2222211 1111123456788899986665 66788
Q ss_pred eEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEe
Q psy3710 165 HVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPG 244 (424)
Q Consensus 165 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (424)
.|.+||.... ........+...+..++++++|..+++...++. |.+||...........
T Consensus 172 ~i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~------------------- 230 (270)
T 1rwi_B 172 RVVKLEAESN-NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTVLPF------------------- 230 (270)
T ss_dssp EEEEECTTTC-CEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEECCC-------------------
T ss_pred EEEEEecCCC-ceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCcceeecc-------------------
Confidence 9999998764 222222233366889999999977777667778 9999975543211000
Q ss_pred ecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 245 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 245 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
.+...+.+++++|+|+++++...++. |+++++...+
T Consensus 231 ----------------------~~~~~p~~i~~~~~g~l~v~~~~~~~-v~~~~~~~~~ 266 (270)
T 1rwi_B 231 ----------------------TGLNTPLAVAVDSDRTVYVADRGNDR-VVKLTSLEHH 266 (270)
T ss_dssp ----------------------CSCSCEEEEEECTTCCEEEEEGGGTE-EEEECCCGGG
T ss_pred ----------------------CCCCCceeEEECCCCCEEEEECCCCE-EEEEcCCCcc
Confidence 12234566777777766666666666 7776665443
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.62 E-value=6.5e-13 Score=115.72 Aligned_cols=250 Identities=16% Similarity=0.148 Sum_probs=166.9
Q ss_pred ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec---------cCCeEEEEeCCCCCCCCcccccc----
Q psy3710 118 GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR---------KSGHVHLVDLADPERPPLDIAAH---- 184 (424)
Q Consensus 118 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~dg~i~i~d~~~~~~~~~~~~~~---- 184 (424)
+.|.++|.. +.+.+..+.....+ .+.++||+++++++.. .++.|.+||..+. +.+..+.-.
T Consensus 59 ~~V~ViD~~-t~~v~~~I~vG~~P----~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-~v~~~I~v~~g~r 132 (386)
T 3sjl_D 59 TQQFVIDGE-AGRVIGMIDGGFLP----NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-LPTADIELPDAPR 132 (386)
T ss_dssp EEEEEEETT-TTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCC
T ss_pred CEEEEEECC-CCeEEEEEECCCCC----cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-eEEEEEECCCccc
Confidence 579999986 78888888876654 2789999999987331 4678999999986 444444321
Q ss_pred ---cCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCC
Q psy3710 185 ---EAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 185 ---~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 259 (424)
......++|+|||++++.+.. ++. |.++|+.+++.+.+++.+-.. ...|.+...+++.+.||.+.+.++....
T Consensus 133 ~~~g~~P~~~a~spDGk~lyVan~~~~~~-VsVID~~t~~vv~tI~v~g~~-~~~P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 133 FLVGTYPWMTSLTPDGKTLLFYQFSPAPA-VGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp CCBSCCGGGEEECTTSSEEEEEECSSSCE-EEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSCEEEEECCSSS
T ss_pred cccCCCCceEEEcCCCCEEEEEEcCCCCe-EEEEECCCCcEEEEEECCCcc-eeecCCCceeEEECCCCCEEEEECCCCC
Confidence 124567999999999988864 577 999999999999988754332 2335555455567778888888887632
Q ss_pred CCCee----eccCCCCeE-EEEEc-CCCCEEEEEeCCCcEEEEEECCCCc--eeee----------------------ec
Q psy3710 260 RPPLD----IAAHEAPLS-CIALN-QTGTRLATASYKGTLIRVFDTGSGQ--KLNE----------------------LR 309 (424)
Q Consensus 260 ~~~~~----~~~~~~~v~-~~~~~-~~~~~l~~~~~d~~~i~iwd~~~~~--~~~~----------------------~~ 309 (424)
..... +.....++. ..+|. ++|++++ .+.+|. |.+.|..++. .+.. ++
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~ 288 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYH 288 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEE
T ss_pred eEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcceeecceeccccccccccccCCCcceeeEC
Confidence 22111 111112222 24664 6775555 555788 9999997653 2222 23
Q ss_pred cCCcEEEEEeC----------CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC-e
Q psy3710 310 RDSSYLCVSSD----------HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN-S 378 (424)
Q Consensus 310 ~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~ 378 (424)
++++.+..... .+.|.++|+.+++.+.+...- ..+..+++++|++ +
T Consensus 289 ~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-----------------------~~~~~lavs~D~~~~ 345 (386)
T 3sjl_D 289 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-----------------------HEIDSINVSQDEKPL 345 (386)
T ss_dssp TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----------------------EEECEEEECSSSSCE
T ss_pred CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-----------------------CCcceEEECCCCCeE
Confidence 45666655432 246888999887766543321 1345789999997 6
Q ss_pred EEEEe-ccCcEEEEEecCCcceee
Q psy3710 379 IIVIC-ADGSYYKFMFNSKGECWR 401 (424)
Q Consensus 379 l~~~~-~dg~v~~~~~~~~~~~~~ 401 (424)
|++.. .++.|.++|.. +++.++
T Consensus 346 ly~tn~~~~~VsViD~~-t~k~~~ 368 (386)
T 3sjl_D 346 LYALSTGDKTLYIHDAE-SGEELR 368 (386)
T ss_dssp EEEEETTTTEEEEEETT-TCCEEE
T ss_pred EEEEcCCCCeEEEEECC-CCcEEE
Confidence 77654 48999999987 555555
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=1.7e-13 Score=133.03 Aligned_cols=277 Identities=10% Similarity=-0.024 Sum_probs=171.0
Q ss_pred CCCCCeeEeec-CCe---EEEEeCC-----cCcccccc------cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 19 NQDQGCFACGM-EDG---FRIYNCD-----PLKEKERQ------DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 19 s~~g~~la~g~-~~~---i~iw~~~-----~~~~~~~~------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
+|+|++++... +.+ -.+|..+ .++..... ..+...+..++|+|+++++++.+...+. ...+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~--e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS--DWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC--SEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC--ceEEEE
Confidence 48999888443 222 4455543 22221111 1122367789999999999987632100 114799
Q ss_pred EEECCCCcEEEEEeecCCeEEEEecCCceEEEe---ec--------------cEEEEeecCCCce--eEEEeeCCCCCee
Q psy3710 84 IWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL---EG--------------LIKVYTFIQCPQQ--LHVFETNPNPKGL 144 (424)
Q Consensus 84 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~--------------~i~v~~~~~~~~~--~~~~~~~~~~~~~ 144 (424)
+||+.+++.+........+..++|+|| ..++. ++ .|++|++. +... ...+.....+...
T Consensus 193 v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lg-t~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 193 FVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLG-TPQSADQPVFATPELPKRG 270 (741)
T ss_dssp EEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETT-SCGGGCEEEECCTTCTTCE
T ss_pred EEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECC-CCchhCEEEeccCCCCeEE
Confidence 999999988664323323467899999 66654 33 28888875 3332 2333333333347
Q ss_pred EEEeecCCCCeEEEeecc----CCeEEEEeCCCCCCC-CcccccccCCeEEEEEccCCCEEEEEec----CCcEEEEEEC
Q psy3710 145 CVLCPNSNNSLLAFPGRK----SGHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASY----KGTLIRVFDT 215 (424)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~----dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~~i~iwd~ 215 (424)
..+.++|||++|++++.. ...|++||+.++... ...+..+...+.... +|+|+.|+..+. ++. |.+||+
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~ 348 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDL 348 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEEC
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeC
Confidence 788999999999883322 348999999874223 555655655555554 488998887765 456 999999
Q ss_pred CCc--ceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEE--
Q psy3710 216 GSG--QKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATA-- 287 (424)
Q Consensus 216 ~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-- 287 (424)
.++ +....+... +..+++ .+..++++...++..++|.+.........+.. +...+..++++|+++.|+..
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~--~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGI--AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEE--EBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEE--ECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 875 222223222 222333 36778888889998777755422222333333 35678899999998866633
Q ss_pred --eCCCcEEEEEECCCCce
Q psy3710 288 --SYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 288 --~~d~~~i~iwd~~~~~~ 304 (424)
...++ |++||+.+++.
T Consensus 427 s~~~P~~-i~~~d~~tg~~ 444 (741)
T 1yr2_A 427 SFTQPAT-VLALDPATAKT 444 (741)
T ss_dssp ETTEEEE-EEEEETTTTEE
T ss_pred CCCCCCE-EEEEECCCCcE
Confidence 23466 99999988763
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=9.8e-12 Score=106.80 Aligned_cols=231 Identities=12% Similarity=0.025 Sum_probs=157.4
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEe
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYT 124 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~ 124 (424)
...+..+.+.++++..+... .++.|.+||.. ++.. .+. ....+.++++.+++.+.++ ++.|..|+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~-------~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQH-------KANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp SCCEEEEEECTTSCEEEEET-------TTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCccceEECCCCCEEEEec-------CCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence 45678888999888666544 25899999987 5543 333 2467899999999866665 46788888
Q ss_pred ecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe
Q psy3710 125 FIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
.. ++ ...+...........+++++++.++++ ...++.|..||. ++.........+...+..+++.++|+.+++..
T Consensus 85 ~~--g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 85 KK--GI-IKEYTLPNPDSAPYGITEGPNGDIWFT-EMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TT--SC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CC--Cc-EEEEeCCCcCCCceeeEECCCCCEEEE-ecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 64 22 333332222345778888999887776 667889999998 43121112223446789999999998777776
Q ss_pred cCCcEEEEEECCCcceeeE-Eec---ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCC
Q psy3710 205 YKGTLIRVFDTGSGQKLNE-LRR---GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 280 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 280 (424)
.++. |..||. +++.... ... ....+++++++. +.++...++.|..||. ++.........+...+.+++++++
T Consensus 160 ~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 160 QNNA-IGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp TTTE-EEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST
T ss_pred CCCE-EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC
Confidence 6778 999998 6654432 221 255678888876 4554556889999998 544222223345577899999999
Q ss_pred CCEEEEEeCCCcEEEEEECC
Q psy3710 281 GTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 281 ~~~l~~~~~d~~~i~iwd~~ 300 (424)
|+.+++...++. |..||..
T Consensus 236 g~l~v~~~~~~~-i~~~d~~ 254 (299)
T 2z2n_A 236 IDLWFTEWGANK-IGRLTSN 254 (299)
T ss_dssp TCEEEEETTTTE-EEEEETT
T ss_pred CCEEEeccCCce-EEEECCC
Confidence 987666656777 9999983
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=4.2e-13 Score=119.10 Aligned_cols=276 Identities=13% Similarity=0.074 Sum_probs=182.7
Q ss_pred CCCCeeEeecC------CeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCC---CcCCCeEEEEECCCC
Q psy3710 20 QDQGCFACGME------DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHP---KYPNNRVMIWDDLKK 90 (424)
Q Consensus 20 ~~g~~la~g~~------~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~---~~~d~~i~iwd~~~~ 90 (424)
|+++++.+... +.|.++|..+.+.+........+ .+.++|+++.++++...... .-.++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 56666664433 24999999999887665543444 79999999998877521000 001478999999999
Q ss_pred cEEEEEeec--------CCeEEEEecCCceEEEe-----eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEE
Q psy3710 91 QVVICLEFN--------APVKGVRLRRDKIVVVL-----EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLA 157 (424)
Q Consensus 91 ~~~~~~~~~--------~~v~~~~~~~~~~~~~~-----~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (424)
+.+.++... .....+.++||+..+.. ++.|.++|+. +.+.+..+.... .. ...|++...+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~-t~kvv~~I~v~g----~~--~~~p~g~~~~ 232 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE-GKTFDRMLDVPD----CY--HIFPASPTVF 232 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEECCS----EE--EEEEEETTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC-CCeEEEEEEcCC----ce--eeccCCCcEE
Confidence 999988753 34678999999966553 3679999996 777777776532 11 1222232222
Q ss_pred EeeccCCeEEEEeCCCCCCCCc----ccccccCCe-EEEEEccCCCEEEEEecCCcEEEEEECCCccee--eEE------
Q psy3710 158 FPGRKSGHVHLVDLADPERPPL----DIAAHEAPL-SCIALNQTGTRLATASYKGTLIRVFDTGSGQKL--NEL------ 224 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~--~~~------ 224 (424)
++.+.||.+.+.+..++ +... .+.....++ ..+.+.+++..++..+..+. +.+.|....... ..+
T Consensus 233 v~~~~dG~~~~V~~~~~-~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 233 YMNCRDGSLARVDFADG-ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp EEEETTSSEEEEECCTT-CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSCTT
T ss_pred EEEcCCCCEEEEECCCC-cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCceEEeeeeeecccc
Confidence 22556677776676432 2211 111111121 23567889888888788888 999998655321 111
Q ss_pred -------ecceeeeeecCCCCeEEEEeec---------CCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCC-EEEEE
Q psy3710 225 -------RRGLCVLCPNSNNSLLAFPGRK---------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT-RLATA 287 (424)
Q Consensus 225 -------~~~~~~~~~~~~~~~~~~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 287 (424)
+.+...+++++++..++++... ++.|.++|..+.+.. ..+.. ......++|+|||+ +++++
T Consensus 311 ~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv-~~I~v-g~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 311 ERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI-NKIEL-GHEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp TGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-EEEEE-EEEECEEEECCSSSCEEEEE
T ss_pred ccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE-EEEEC-CCCcCeEEEccCCCEEEEEE
Confidence 1223347889999988886432 357999999987743 33321 22578999999999 88888
Q ss_pred e-CCCcEEEEEECCCCceeeeec
Q psy3710 288 S-YKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 288 ~-~d~~~i~iwd~~~~~~~~~~~ 309 (424)
. .++. |.++|+.+++.+.++.
T Consensus 389 n~~s~~-VsVID~~t~kvv~tI~ 410 (426)
T 3c75_H 389 SAGTQT-LHIYDAATGEELRSVD 410 (426)
T ss_dssp ETTTTE-EEEEETTTCCEEEEEC
T ss_pred cCCCCe-EEEEECCCCCEEEEec
Confidence 8 4788 9999999999998873
No 201
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=4.2e-13 Score=119.10 Aligned_cols=252 Identities=17% Similarity=0.116 Sum_probs=174.1
Q ss_pred ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec---------cCCeEEEEeCCCCCCCCcccccc----
Q psy3710 118 GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR---------KSGHVHLVDLADPERPPLDIAAH---- 184 (424)
Q Consensus 118 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~dg~i~i~d~~~~~~~~~~~~~~---- 184 (424)
+.|.++|.. +.+.+..+.....+ .+.++||+++++++.. .++.|.++|..+. +.+..+.-.
T Consensus 99 ~~VsVID~~-t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDGS-TGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-LPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEETT-TTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEEEEEEETTCCC
T ss_pred CeEEEEECC-CCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-cEEEEEECCCccc
Confidence 689999996 88888888876654 5788999999988332 4678999999986 444444311
Q ss_pred ---cCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCC
Q psy3710 185 ---EAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 185 ---~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 259 (424)
......++|+|||++++.+.. ++. |.+.|+.+++.+.+++.+-. ....|.+...+++.+.||.+.+.+..+++
T Consensus 173 ~~~g~~P~~~~~spDGk~lyV~n~~~~~~-VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 173 FLVGTYQWMNALTPDNKNLLFYQFSPAPA-VGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCBSCCGGGSEECTTSSEEEEEECSSSCE-EEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred cccCCCcceEEEcCCCCEEEEEecCCCCe-EEEEECCCCeEEEEEEcCCc-eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 133567899999999998874 467 99999999999988875432 33445555566667778888888884433
Q ss_pred CCC---eeeccCCCCe-EEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee------------------------eeeccC
Q psy3710 260 RPP---LDIAAHEAPL-SCIALNQTGTRLATASYKGTLIRVFDTGSGQKL------------------------NELRRD 311 (424)
Q Consensus 260 ~~~---~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~------------------------~~~~~~ 311 (424)
... ..+.....++ ..+.+.+++..++..+..+. +.+.|...+... ..++++
T Consensus 251 v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d 329 (426)
T 3c75_H 251 TKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ 329 (426)
T ss_dssp CEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred EEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence 211 0111111221 23578899888887788888 999998543210 235667
Q ss_pred CcEEEEEeC----------CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC-eEE
Q psy3710 312 SSYLCVSSD----------HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN-SII 380 (424)
Q Consensus 312 ~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~ 380 (424)
++.+.+... ++.|.++|+.+.+.+.++..-. ....++|+|||+ +|+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-----------------------~P~gia~spDg~~~ly 386 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-----------------------EIDSINVSQDAEPLLY 386 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----------------------EECEEEECCSSSCEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-----------------------CcCeEEEccCCCEEEE
Confidence 676665532 3579999999987765543211 134789999999 888
Q ss_pred EEe-ccCcEEEEEecCCcceeee
Q psy3710 381 VIC-ADGSYYKFMFNSKGECWRD 402 (424)
Q Consensus 381 ~~~-~dg~v~~~~~~~~~~~~~~ 402 (424)
+.. .++.|.++|.. +.+.++.
T Consensus 387 v~n~~s~~VsVID~~-t~kvv~t 408 (426)
T 3c75_H 387 ALSAGTQTLHIYDAA-TGEELRS 408 (426)
T ss_dssp EEETTTTEEEEEETT-TCCEEEE
T ss_pred EEcCCCCeEEEEECC-CCCEEEE
Confidence 888 59999999997 5555543
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=8.5e-14 Score=134.20 Aligned_cols=247 Identities=12% Similarity=0.046 Sum_probs=154.4
Q ss_pred eecCCCCeEEEeeccCC----eEEEEeCCCCCCCCccc------ccccCCeEEEEEccCCCEEEE-----EecCCcEEEE
Q psy3710 148 CPNSNNSLLAFPGRKSG----HVHLVDLADPERPPLDI------AAHEAPLSCIALNQTGTRLAT-----ASYKGTLIRV 212 (424)
Q Consensus 148 ~~~~~~~~l~~~~~~dg----~i~i~d~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~-----~~~d~~~i~i 212 (424)
.++|+|++++.+....+ .+...+...+ .....+ .+|...+..++|||||++|+. |+.+.. |++
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~-i~v 151 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESG-QEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAV-LHV 151 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTS-CCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCE-EEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCC-CcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEE-EEE
Confidence 34578888887333332 3444444333 222221 135557899999999999984 334467 999
Q ss_pred EECCCccee-eEEecce--eeeeecCCCCeEEEEeecCCe-------------EEEEeCCCCCCC---CeeeccCCCCeE
Q psy3710 213 FDTGSGQKL-NELRRGL--CVLCPNSNNSLLAFPGRKSGH-------------VHLVDLADPERP---PLDIAAHEAPLS 273 (424)
Q Consensus 213 wd~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~dg~-------------i~i~d~~~~~~~---~~~~~~~~~~v~ 273 (424)
||+.+++.+ ....... ..++|+|+++.++++. .+.. |++|++.++... +.....|...+.
T Consensus 152 ~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~-~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 152 IDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEW-LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp EETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEE-CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred EECCCCCCcCCcccCcccccceEEecCCCEEEEEE-ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 999998865 2211222 6789999999998854 4333 999999887532 112234556789
Q ss_pred EEEEcCCCCEEEEEeCCC----cEEEEEECCCCceeee----------eccCCcEEEEEeC----CCcEEEEEccccccc
Q psy3710 274 CIALNQTGTRLATASYKG----TLIRVFDTGSGQKLNE----------LRRDSSYLCVSSD----HGTVHVFSVDEAQKI 335 (424)
Q Consensus 274 ~~~~~~~~~~l~~~~~d~----~~i~iwd~~~~~~~~~----------~~~~~~~l~~~~~----d~~i~iw~~~~~~~~ 335 (424)
.+.|+|||++|+.++.++ . |.+|+..+++.... +.++|+ ++..+. ++.|.+||+.+++..
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~-l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSEND-VYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEE-EEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EEEECCCCCEEEEEEeCCCCceE-EEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCcc
Confidence 999999999998888766 5 77887655543221 224666 444443 578999998775421
Q ss_pred cccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeee------eehhhhe
Q psy3710 336 NKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRD------VYIQFLE 409 (424)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~------~~~~~~~ 409 (424)
.- . ...+. .+...+..++|+ ++..+++...|+..++|.++..++..+. .....+.
T Consensus 309 ~~-~-----~l~~~------------~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~ 369 (695)
T 2bkl_A 309 SW-K-----EIVPE------------DSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLM 369 (695)
T ss_dssp GC-E-----EEECC------------CSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCB
T ss_pred CC-e-----EEecC------------CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEee
Confidence 00 0 00000 011234556777 6778888888999999988754543332 2234456
Q ss_pred ecCCCceee
Q psy3710 410 MTNDSNLLS 418 (424)
Q Consensus 410 ~~~d~~~l~ 418 (424)
++||++.++
T Consensus 370 ~s~d~~~l~ 378 (695)
T 2bkl_A 370 GLEDLDDAY 378 (695)
T ss_dssp SCTTCSEEE
T ss_pred cCCCCCEEE
Confidence 788887666
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1.2e-11 Score=106.34 Aligned_cols=270 Identities=9% Similarity=-0.001 Sum_probs=177.4
Q ss_pred ccCCceEEEEECCCCCeeEeecCCe-EEEEeCCcCccccc-ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE
Q psy3710 8 TYKNGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKER-QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw 85 (424)
.....+.+++++++|+++++...++ |.+|+.+ ++.... .......+..+.+.++++..++.. .++.|..+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~v~~~ 88 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN-------GANKIGKL 88 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec-------CCCeEEEE
Confidence 3456789999999998877775544 9999977 443221 111235677788888887655443 25789999
Q ss_pred ECCCCcEEEEEe---ecCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 86 DDLKKQVVICLE---FNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 86 d~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
|.. ++.. .+. ....+.++++.+++.+.++ ++.|..++.. ++.. .+...........+++++++++.++
T Consensus 89 d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~- 162 (300)
T 2qc5_A 89 SKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIY-EYDLPNKGSYPAFITLGSDNALWFT- 162 (300)
T ss_dssp CTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEE-EEECSSTTCCEEEEEECTTSSEEEE-
T ss_pred CCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEE-EccCCCCCCCceeEEECCCCCEEEE-
Confidence 987 6653 333 2357899999998866655 4678888864 3332 2322222344678888999986655
Q ss_pred eccCCeEEEEeCCCCCCCCc-ccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeE-Ee---cceeeeeec
Q psy3710 160 GRKSGHVHLVDLADPERPPL-DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-LR---RGLCVLCPN 234 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-~~---~~~~~~~~~ 234 (424)
...++.|..+|. ++ .... ....+...+..+++.++|+..++....+. |..+|. +++.... .. .....++++
T Consensus 163 ~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~~d 238 (300)
T 2qc5_A 163 ENQNNSIGRITN-TG-KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISEYDIPTPNARPHAITAG 238 (300)
T ss_dssp ETTTTEEEEECT-TC-CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred ecCCCeEEEECC-CC-cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEEEECCCCCCCceEEEEC
Confidence 666789999998 33 2221 12233456889999999987776666777 999998 4543332 22 125667888
Q ss_pred CCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 235 SNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 235 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+++. +.++...++.|..||.. +......+......+.+++++++|+++++.. . . |..+|.+
T Consensus 239 ~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~-i~~~~p~ 299 (300)
T 2qc5_A 239 KNSE-IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-K-IGKLNLN 299 (300)
T ss_dssp STTC-EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-E-EEEEEEC
T ss_pred CCCC-EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-c-eEEeCCC
Confidence 8876 55545567899999983 3321122233456688999999998666655 4 6 8777754
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.56 E-value=2.6e-12 Score=108.70 Aligned_cols=223 Identities=10% Similarity=0.021 Sum_probs=151.2
Q ss_pred CeEEEEecCCceEEE-e---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC
Q psy3710 101 PVKGVRLRRDKIVVV-L---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER 176 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~-~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~ 176 (424)
...++++++++.+.+ + ++.|.+|+.. ... ...+. .........++++++++++++ .. ++.|.+||....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~-~~~-~~~~~-~~~~~~p~~i~~~~~g~l~v~-~~-~~~i~~~d~~~~-- 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATG-STG-TTVLP-FNGLYQPQGLAVDGAGTVYVT-DF-NNRVVTLAAGSN-- 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------EECC-CCSCCSCCCEEECTTCCEEEE-ET-TTEEEEECTTCS--
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCC-Ccc-cceEe-eCCcCCcceeEECCCCCEEEE-cC-CCEEEEEeCCCc--
Confidence 778999999886665 4 5789999864 222 22221 111123456788889886654 44 889999998764
Q ss_pred CCcccc-cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec---ceeeeeecCCCCeEEEEeecCCeEEE
Q psy3710 177 PPLDIA-AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNSLLAFPGRKSGHVHL 252 (424)
Q Consensus 177 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dg~i~i 252 (424)
....+. .....+..++++++|+.+++...++. |.+|+..+......... ....+++++++. ++++...++.|.+
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR-VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVK 175 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTE-EEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEE
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCE-EEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEE
Confidence 223232 23357899999999987777777788 99998665543322211 356688888886 5565667889999
Q ss_pred EeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceee------------eeccCCcEEEEEeC
Q psy3710 253 VDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN------------ELRRDSSYLCVSSD 320 (424)
Q Consensus 253 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~------------~~~~~~~~l~~~~~ 320 (424)
||....... .....+...+.+++++++|.++++...++. |.+|+........ .+.++|+++++...
T Consensus 176 ~~~~~~~~~-~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 176 LEAESNNQV-VLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp ECTTTCCEE-ECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred EecCCCceE-eecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 998765421 111233367899999999977777777888 9999987643221 24578888888888
Q ss_pred CCcEEEEEcccccc
Q psy3710 321 HGTVHVFSVDEAQK 334 (424)
Q Consensus 321 d~~i~iw~~~~~~~ 334 (424)
++.|+++++...+.
T Consensus 254 ~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 254 NDRVVKLTSLEHHH 267 (270)
T ss_dssp GTEEEEECCCGGGS
T ss_pred CCEEEEEcCCCccc
Confidence 99999999887543
No 205
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.54 E-value=3.6e-11 Score=106.99 Aligned_cols=283 Identities=12% Similarity=0.101 Sum_probs=179.9
Q ss_pred cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEee----------cCCeEE-EEecCCceEEEe-eccEEEEeecCCC
Q psy3710 62 RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF----------NAPVKG-VRLRRDKIVVVL-EGLIKVYTFIQCP 129 (424)
Q Consensus 62 ~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~----------~~~v~~-~~~~~~~~~~~~-~~~i~v~~~~~~~ 129 (424)
.++.+.+.+ .++.|..+|.++|+.+..+.. ...+.+ +....+..++.+ ++.|..+|.+ ++
T Consensus 52 ~~~~v~~~~-------~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~-tG 123 (376)
T 3q7m_A 52 ADNVVYAAD-------RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTS-DG 123 (376)
T ss_dssp ETTEEEEEC-------TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETT-TC
T ss_pred ECCEEEEEc-------CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECC-CC
Confidence 456666665 368999999999999887774 223333 344444455555 7889999986 77
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCe-----EEEEEccCCCEEEEEe
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPL-----SCIALNQTGTRLATAS 204 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~ 204 (424)
+.+..............+ .+..+++ ++.++.|..+|..++ +.+.......... ...... +..++.+.
T Consensus 124 ~~~W~~~~~~~~~~~p~~----~~~~v~v-~~~~g~l~~~d~~tG-~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~ 195 (376)
T 3q7m_A 124 TVAWQTKVAGEALSRPVV----SDGLVLI-HTSNGQLQALNEADG-AVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGG 195 (376)
T ss_dssp CEEEEEECSSCCCSCCEE----ETTEEEE-ECTTSEEEEEETTTC-CEEEEEECCC-----CCCCCCEEE--TTEEEECC
T ss_pred CEEEEEeCCCceEcCCEE----ECCEEEE-EcCCCeEEEEECCCC-cEEEEEeCCCCceeecCCCCcEEE--CCEEEEEc
Confidence 777666554322111112 1345666 888999999999886 4333332211110 111222 35778888
Q ss_pred cCCcEEEEEECCCcceeeEEecceee----------eeecC--CCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCe
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRGLCV----------LCPNS--NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPL 272 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~~~~----------~~~~~--~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 272 (424)
.++. +..+|..+++.+......... +...| .+..+++ ++.++.+..+|..+++.... . .....
T Consensus 196 ~~g~-l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~-~~~~g~l~~~d~~tG~~~w~-~--~~~~~ 270 (376)
T 3q7m_A 196 DNGR-VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA-LAYNGNLTALDLRSGQIMWK-R--ELGSV 270 (376)
T ss_dssp TTTE-EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE-ECTTSCEEEEETTTCCEEEE-E--CCCCE
T ss_pred CCCE-EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE-EecCcEEEEEECCCCcEEee-c--cCCCC
Confidence 8898 999999999988776533100 11111 2344444 77899999999988764322 1 12234
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc-----------CCcEEEEEeCCCcEEEEEccccccccccccc
Q psy3710 273 SCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR-----------DSSYLCVSSDHGTVHVFSVDEAQKINKQSSL 341 (424)
Q Consensus 273 ~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~-----------~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 341 (424)
..+.. ++..++.++.++. +..+|..+|+.+..... .+..|+.++.+|.|+++|..+++.+.+...
T Consensus 271 ~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~- 346 (376)
T 3q7m_A 271 NDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKV- 346 (376)
T ss_dssp EEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC-
T ss_pred CCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEec-
Confidence 44444 4567888888988 99999999998877641 346788888999999999999876433211
Q ss_pred eeeeccCccccCCceeeEEeecCCCce-EEEEecCCCeEEEEeccCcEEEEE
Q psy3710 342 ASASFLPKYFSSSWSFCKFQIPSDPPC-ICAFGADSNSIIVICADGSYYKFM 392 (424)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~l~~~~~dg~v~~~~ 392 (424)
....+. .... .+..|++++.+|.|+.|+
T Consensus 347 ---------------------~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 347 ---------------------DSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ---------------------CTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ---------------------CCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 011111 1111 256888999999999986
No 206
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.54 E-value=1.8e-11 Score=109.02 Aligned_cols=289 Identities=11% Similarity=0.065 Sum_probs=176.2
Q ss_pred CCeeEeecCCe-EEEEeCCcCcccccccccC--------CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE
Q psy3710 22 QGCFACGMEDG-FRIYNCDPLKEKERQDFTD--------GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV 92 (424)
Q Consensus 22 g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~ 92 (424)
+..+.+++.++ |..+|.++++.+....... ..........++..+++.+ .++.|..+|.++|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS-------EKAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE-------TTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc-------CCCEEEEEECCCCCE
Confidence 44566666555 9999999888765444321 1111222333456666665 478999999999999
Q ss_pred EEEEeecCCeE-EEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCe---eEEEeecCCCCeEEEeeccCCeEE
Q psy3710 93 VICLEFNAPVK-GVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKG---LCVLCPNSNNSLLAFPGRKSGHVH 167 (424)
Q Consensus 93 ~~~~~~~~~v~-~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~dg~i~ 167 (424)
+........+. ......+..++.+ ++.+..+|.. +++.+........... ...... .+..+++ +..++.+.
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~-g~~~g~l~ 201 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEA-DGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVV-GGDNGRVS 201 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETT-TCCEEEEEECCC-----CCCCCCEE--ETTEEEE-CCTTTEEE
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECC-CCcEEEEEeCCCCceeecCCCCcEE--ECCEEEE-EcCCCEEE
Confidence 98887543332 2233333344444 7889999986 7777766654332110 001111 1345666 88899999
Q ss_pred EEeCCCCCCCCcccccccC-------CeEEEEEcc--CCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCC
Q psy3710 168 LVDLADPERPPLDIAAHEA-------PLSCIALNQ--TGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNS 238 (424)
Q Consensus 168 i~d~~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (424)
.+|..++ +.......... .+..+.-.| .+..++.++.++. +..+|.++++.+........ ......+.
T Consensus 202 ~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~~~~-~~~~~~~~ 278 (376)
T 3q7m_A 202 AVLMEQG-QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKRELGSV-NDFIVDGN 278 (376)
T ss_dssp EEETTTC-CEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECCCCE-EEEEEETT
T ss_pred EEECCCC-cEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccCCCC-CCceEECC
Confidence 9999876 33333221100 000011111 2467788888888 99999999988876654321 11222345
Q ss_pred eEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc--------
Q psy3710 239 LLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR-------- 310 (424)
Q Consensus 239 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~-------- 310 (424)
.+++ ++.++.+..+|..+++.....-......+..... .+..|+.++.+|. +.++|.++|+.+..+..
T Consensus 279 ~l~~-~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~-l~~~d~~tG~~~~~~~~~~~~~~~~ 354 (376)
T 3q7m_A 279 RIYL-VDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGY-LHWINVEDGRFVAQQKVDSSGFQTE 354 (376)
T ss_dssp EEEE-EETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSE-EEEEETTTCCEEEEEECCTTCBCSC
T ss_pred EEEE-EcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCe-EEEEECCCCcEEEEEecCCCcceeC
Confidence 5554 7789999999999877422221111222222333 2468888999999 99999999998876643
Q ss_pred ---CCcEEEEEeCCCcEEEEE
Q psy3710 311 ---DSSYLCVSSDHGTVHVFS 328 (424)
Q Consensus 311 ---~~~~l~~~~~d~~i~iw~ 328 (424)
.+..|+.++.+|.|+.|+
T Consensus 355 ~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 355 PVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEEETTEEEEEBTTSCEEEEE
T ss_pred CEEECCEEEEEeCCCEEEEEe
Confidence 245677888888888886
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=7.8e-11 Score=101.17 Aligned_cols=260 Identities=12% Similarity=0.072 Sum_probs=165.9
Q ss_pred cCCeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCC
Q psy3710 99 NAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 175 (424)
Q Consensus 99 ~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~ 175 (424)
...+.++++.+++.+.++ ++.|.+|+.. ++ ...+........+..+++++++.+.++ ...++.|..||.. +.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~--~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS--GR-IKEFEVPTPDAKVMCLIVSSLGDIWFT-ENGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTT-SC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC--Cc-eEEEECCCCCCcceeEEECCCCCEEEE-ecCCCeEEEECCC-CC
Confidence 357889999999866655 4789999864 33 223333222345778888999987775 6667899999987 32
Q ss_pred CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceee-EEe---cceeeeeecCCCCeEEEEeecCCeEE
Q psy3710 176 RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN-ELR---RGLCVLCPNSNNSLLAFPGRKSGHVH 251 (424)
Q Consensus 176 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~dg~i~ 251 (424)
............+..+++.++|+.+++...++. |..+|.. ++... .+. .....+++.+++. ++++...++.|.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~ 170 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDR-IGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIG 170 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCe-EEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEE
Confidence 211122223467899999999988877766778 9999987 55432 222 2256678888877 555455678999
Q ss_pred EEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee-------------eccCCcEEEEE
Q psy3710 252 LVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-------------LRRDSSYLCVS 318 (424)
Q Consensus 252 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-------------~~~~~~~l~~~ 318 (424)
.+|. +++........+...+..++++++|++.++....+. |.+|+. +++.... +.++|++.++.
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 9998 433221222234567899999999987777666777 999998 4443221 23566666665
Q ss_pred eCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEe
Q psy3710 319 SDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMF 393 (424)
Q Consensus 319 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~ 393 (424)
..++.|..|+. +++.. ... .+ .....+..++++++|+..+ ++.. .|..++.
T Consensus 248 ~~~~~i~~~~~-~g~~~-~~~-------~~-------------~~~~~~~~i~~~~~g~l~v-~~~~-~i~~~~p 298 (300)
T 2qc5_A 248 WGANQIGRITN-DNTIQ-EYQ-------LQ-------------TENAEPHGITFGKDGSVWF-ALKC-KIGKLNL 298 (300)
T ss_dssp TTTTEEEEECT-TSCEE-EEE-------CC-------------STTCCCCCEEECTTSCEEE-ECSS-EEEEEEE
T ss_pred cCCCeEEEECC-CCcEE-EEE-------CC-------------ccCCccceeEeCCCCCEEE-EccC-ceEEeCC
Confidence 55678888887 33211 000 00 0123456788999987544 4444 5655554
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=8.8e-12 Score=107.96 Aligned_cols=235 Identities=10% Similarity=0.011 Sum_probs=157.1
Q ss_pred CCceEEEEECCCCCeeEe-------ecCCe-EEEEeCCcCccccccc----ccCCCeeeEEEecc-CceEEEEeCCcCCC
Q psy3710 10 KNGLLYAGFNQDQGCFAC-------GMEDG-FRIYNCDPLKEKERQD----FTDGGLGHVEMLFR-CNYLALVGGGTHPK 76 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~-------g~~~~-i~iw~~~~~~~~~~~~----~~~~~i~~~~~~~~-~~~l~~~~~~~~~~ 76 (424)
-....+++|+++|.++++ +..++ |.+|+..+++...... .+...+..+.+.++ ++.++ +..
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~----- 90 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADM----- 90 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EET-----
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EEC-----
Confidence 345678999999988877 44444 9999987766532211 13356778888888 55444 442
Q ss_pred cCCCeEEEEECCCCcEEEE-Eee-----cCCeEEEEecCCceEEEee------------------ccEEEEeecCCCcee
Q psy3710 77 YPNNRVMIWDDLKKQVVIC-LEF-----NAPVKGVRLRRDKIVVVLE------------------GLIKVYTFIQCPQQL 132 (424)
Q Consensus 77 ~~d~~i~iwd~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~~~~~------------------~~i~v~~~~~~~~~~ 132 (424)
.+.|.+||.+ ++.... ... ...+.++++.+++.+.+++ +.|..|+. .++..
T Consensus 91 --~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~g~~~ 165 (314)
T 1pjx_A 91 --RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT--DGQMI 165 (314)
T ss_dssp --TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT--TSCEE
T ss_pred --CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECC--CCCEE
Confidence 3589999988 776443 221 1347899999998766652 34555553 33333
Q ss_pred EEEeeCCCCCeeEEEeec----CCCCeEEEeeccCCeEEEEeCCCCCC-----CCccccccc-CCeEEEEEccCCCEEEE
Q psy3710 133 HVFETNPNPKGLCVLCPN----SNNSLLAFPGRKSGHVHLVDLADPER-----PPLDIAAHE-APLSCIALNQTGTRLAT 202 (424)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~ 202 (424)
...... .....++++ ++++.+.++...++.|.+||...... ....+..+. ..+..++++++|+.+++
T Consensus 166 ~~~~~~---~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 166 QVDTAF---QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA 242 (314)
T ss_dssp EEEEEE---SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE
T ss_pred EeccCC---CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE
Confidence 222221 124567788 99977766356789999999762111 112233333 56789999999988888
Q ss_pred EecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCeEEEEeCCCCC
Q psy3710 203 ASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 203 ~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~ 259 (424)
...++. |.+||..+++.+..+..+ ...+++++++..++++...++.|..|++....
T Consensus 243 ~~~~~~-i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 243 NWGSSH-IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EETTTE-EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EcCCCE-EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 777888 999999877766665533 56778889998788877778899999987643
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=1.8e-12 Score=125.85 Aligned_cols=243 Identities=13% Similarity=0.040 Sum_probs=155.4
Q ss_pred ccCCceEEEEECCCCCeeEeecCC-----e-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCC------
Q psy3710 8 TYKNGLLYAGFNQDQGCFACGMED-----G-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHP------ 75 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g~~~-----~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~------ 75 (424)
+|...+..++|||||++||.+.++ . |++||+++++.+.. ..+...+..++|+|+ +.+++++.....
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344578899999999999965433 3 99999998877432 122222357899999 999888743200
Q ss_pred -CcCCCeEEEEECCCCcE--EEEEee---cCCeEEEEecCCceEEEe---ec-----cEEEEeecCCC-ce-eEEEeeCC
Q psy3710 76 -KYPNNRVMIWDDLKKQV--VICLEF---NAPVKGVRLRRDKIVVVL---EG-----LIKVYTFIQCP-QQ-LHVFETNP 139 (424)
Q Consensus 76 -~~~d~~i~iwd~~~~~~--~~~~~~---~~~v~~~~~~~~~~~~~~---~~-----~i~v~~~~~~~-~~-~~~~~~~~ 139 (424)
......|++|++.++.. ...+.. ...+..+.|+||+..++. ++ .|++||+. ++ .. ...+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~-~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT-NGKIGPVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE-TTEECCCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC-CCCCcccEEecCCC
Confidence 00034699999987652 222332 235889999999976664 32 79999986 43 12 44454443
Q ss_pred CCCeeEEEeecCCCCeEEEeecc----CCeEEEEeCCCCC-CCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEE
Q psy3710 140 NPKGLCVLCPNSNNSLLAFPGRK----SGHVHLVDLADPE-RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~----dg~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 214 (424)
.. .... ++|+++.|++ .+. ++.|.+||+.++. .....+..+...+..++++ ++..+++...|+. .++|.
T Consensus 317 ~~--~~~~-~~~dg~~l~~-~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~ 390 (741)
T 1yr2_A 317 KA--QWDF-VDGVGDQLWF-VSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLA 390 (741)
T ss_dssp SS--CEEE-EEEETTEEEE-EECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEE
T ss_pred Cc--eEEE-EeccCCEEEE-EECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEE
Confidence 22 2222 3478888887 443 4569999988641 2223334445556678887 5567788888887 77775
Q ss_pred CC-CcceeeEEecc----eeeeeecCCCCeEEEEee---cCCeEEEEeCCCCC
Q psy3710 215 TG-SGQKLNELRRG----LCVLCPNSNNSLLAFPGR---KSGHVHLVDLADPE 259 (424)
Q Consensus 215 ~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~dg~i~i~d~~~~~ 259 (424)
+. +++....+..+ +..+.+++++..++++.+ ..++|+.||+.+++
T Consensus 391 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 391 FDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 43 45555555422 456778888887777554 34789999998754
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=2.1e-12 Score=112.80 Aligned_cols=242 Identities=10% Similarity=-0.038 Sum_probs=162.9
Q ss_pred cEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee---------ccCCeEEEEeCCCCCCCCcccccc-----
Q psy3710 119 LIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG---------RKSGHVHLVDLADPERPPLDIAAH----- 184 (424)
Q Consensus 119 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~dg~i~i~d~~~~~~~~~~~~~~----- 184 (424)
.|.++|.. +.+.+..+.....+ .+.++||++.++++. ..++.|.+||+.+. +.+..+...
T Consensus 47 ~vsvID~~-t~~v~~~i~vG~~P----~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAG-CGVTLGHSLGAFLS----LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETT-TTEEEEEEEECTTC----EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEEEEEETTSCSC
T ss_pred eEEEEECC-CCeEEEEEeCCCCC----ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEEEEECCCcccc
Confidence 77888886 77888888776654 478999999999833 24789999999987 556665432
Q ss_pred --cCCeEEEEEccCCCEEEEEec--CCcEEEE--EECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCC-
Q psy3710 185 --EAPLSCIALNQTGTRLATASY--KGTLIRV--FDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD- 257 (424)
Q Consensus 185 --~~~v~~~~~~~~~~~l~~~~~--d~~~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~- 257 (424)
......++++|||++++.+.. ... +.+ +|..+ +.+++.+-. ..+.|++...+++.+.||.+.+.|+.+
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~-v~V~~iD~~t---v~~i~v~~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAA-AGLSVPGASD---DQLTKSASC-FHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCE-EEEEETTTEE---EEEEECSSC-CCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCe-EEEEEEchhh---ceEEECCCc-eEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 134578999999999998875 355 888 89877 445543211 334567777777778889988899876
Q ss_pred ----CCCCC---eeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc--ee----------------------e
Q psy3710 258 ----PERPP---LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ--KL----------------------N 306 (424)
Q Consensus 258 ----~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~--~~----------------------~ 306 (424)
++... ..+.....+. + ++++..++..+. +. +.+.|..++. .+ .
T Consensus 196 ~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~-V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v 269 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SS-ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV 269 (368)
T ss_dssp CCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SC-CEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred cccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CE-EEEEECCCCcceEEEEEEeccccccccccccCcceee
Confidence 22110 0111223333 3 566666666666 77 9999986432 11 2
Q ss_pred eeccCCcEEEEEeC---------CCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCC
Q psy3710 307 ELRRDSSYLCVSSD---------HGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSN 377 (424)
Q Consensus 307 ~~~~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 377 (424)
.++++++.+..+.. ++.+.++|+.+.+.+.++.... ....++|+|||+
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-----------------------~p~gi~~s~Dg~ 326 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-----------------------DSDAIIAAQDGA 326 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-----------------------EECEEEECCSSS
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-----------------------CcceEEECCCCC
Confidence 36788887776533 2356699999987765543211 134789999998
Q ss_pred eEEEEe--ccCcEEEEEecCCcceee
Q psy3710 378 SIIVIC--ADGSYYKFMFNSKGECWR 401 (424)
Q Consensus 378 ~l~~~~--~dg~v~~~~~~~~~~~~~ 401 (424)
+++++. .++.|.++|+. +.+.++
T Consensus 327 ~l~va~~~~~~~VsVID~~-t~kvv~ 351 (368)
T 1mda_H 327 SDNYANSAGTEVLDIYDAA-SDQDQS 351 (368)
T ss_dssp CEEEEEETTTTEEEEEESS-SCEEEE
T ss_pred EEEEEccCCCCeEEEEECC-CCcEEE
Confidence 655544 48999999997 555554
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=5.2e-12 Score=121.51 Aligned_cols=258 Identities=13% Similarity=0.102 Sum_probs=161.2
Q ss_pred ccCCceEEEEECCCCCeeEee-----cCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCe
Q psy3710 8 TYKNGLLYAGFNQDQGCFACG-----MEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR 81 (424)
Q Consensus 8 ~h~~~V~~~~~s~~g~~la~g-----~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~ 81 (424)
+|...+..++|||||++||.+ ++.. |++||+++++.+.. ..+......++|+ |++.+++++.. ..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~-------~~ 196 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYD-------KP 196 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESS-------CC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEec-------Cc
Confidence 466789999999999999943 3333 99999999886432 1212223568899 99999888832 11
Q ss_pred EEEEECCCCcEEEEEeecCCeEEEEecCCceEEEeeccEEEEeecCCCc-eeEEEeeCC-CCCeeEEEeecCCCCeEEEe
Q psy3710 82 VMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQ-QLHVFETNP-NPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 82 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~ 159 (424)
.+.. ..... ....|++|++..... ....+.... ++.....+.++||+++|+++
T Consensus 197 -------~~~~---~~~~~---------------~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~ 251 (693)
T 3iuj_A 197 -------DGSE---LSART---------------DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLIS 251 (693)
T ss_dssp -------C----------C---------------CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEE
T ss_pred -------cccc---ccccC---------------CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEE
Confidence 0000 00000 023466666642221 122222222 23345678899999998764
Q ss_pred ecc---CCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec-C---CcEEEEEECCCcce--eeEEecc-ee
Q psy3710 160 GRK---SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-K---GTLIRVFDTGSGQK--LNELRRG-LC 229 (424)
Q Consensus 160 ~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---~~~i~iwd~~~~~~--~~~~~~~-~~ 229 (424)
... ...|+++|+.++......+..+....... ++++|..|+..+. + +. |..+|+.++.. ...+..+ ..
T Consensus 252 ~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 252 AANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp EESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEECCCSS
T ss_pred EccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEecCCCC
Confidence 432 35899999987644566666666666665 6677766655443 2 56 99999987654 2233222 11
Q ss_pred eeeecCCCCeEEEEeecCC--eEEEEeCCCCCCCCeeec-cCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEECCCC
Q psy3710 230 VLCPNSNNSLLAFPGRKSG--HVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASYK----GTLIRVFDTGSG 302 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----~~~i~iwd~~~~ 302 (424)
.+.+++++..++++...++ .|++||+.... ...+. .....+..+.++|+++.++....+ +. +..||+.++
T Consensus 330 ~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~-l~~~d~~~g 406 (693)
T 3iuj_A 330 VLTVHSGSGYLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT-LYRFEPKSG 406 (693)
T ss_dssp CEEEEEETTEEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE-EEEECTTTC
T ss_pred EEEEEEECCEEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE-EEEEECCCC
Confidence 2288899999998777777 68889887543 22222 344567778888888877665544 67 999999877
Q ss_pred ce
Q psy3710 303 QK 304 (424)
Q Consensus 303 ~~ 304 (424)
+.
T Consensus 407 ~~ 408 (693)
T 3iuj_A 407 AI 408 (693)
T ss_dssp CE
T ss_pred eE
Confidence 54
No 212
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.50 E-value=3.9e-11 Score=114.44 Aligned_cols=262 Identities=10% Similarity=0.113 Sum_probs=170.7
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCC------------eEEEEecCCceEEEe-eccEEEEeecCCC
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP------------VKGVRLRRDKIVVVL-EGLIKVYTFIQCP 129 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------v~~~~~~~~~~~~~~-~~~i~v~~~~~~~ 129 (424)
+..+++.+ .++.|.-+|..+|+.+.++..... ...+.+..+..++.+ ++.+..+|.+ ++
T Consensus 77 ~g~vyv~~-------~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~-tG 148 (677)
T 1kb0_A 77 DGIMYVSA-------SWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAA-TG 148 (677)
T ss_dssp TTEEEEEC-------GGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETT-TC
T ss_pred CCEEEEEC-------CCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECC-CC
Confidence 45555555 368999999999999998874321 123444444455555 8999999986 78
Q ss_pred ceeEEEeeC-CCC--CeeEEEeecCCCCeEEEeecc------CCeEEEEeCCCCCCCCcccccc----------------
Q psy3710 130 QQLHVFETN-PNP--KGLCVLCPNSNNSLLAFPGRK------SGHVHLVDLADPERPPLDIAAH---------------- 184 (424)
Q Consensus 130 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~~~~------dg~i~i~d~~~~~~~~~~~~~~---------------- 184 (424)
+.+..+... ... ..+.. .+...+..+++ +.. +|.|+.+|..++ +.+..+...
T Consensus 149 ~~~W~~~~~~~~~~~~~~~~-~p~v~~~~v~v-~~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~~~~~~~~~~~~~g 225 (677)
T 1kb0_A 149 KEVWHQNTFEGQKGSLTITG-APRVFKGKVII-GNGGAEYGVRGYITAYDAETG-ERKWRWFSVPGDPSKPFEDESMKRA 225 (677)
T ss_dssp CEEEEEETTTTCCSSCBCCS-CCEEETTEEEE-CCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred CEEeeecCCcCcCcCccccc-CcEEECCEEEE-EecccccCCCCEEEEEECCCC-cEEEEeccCCCCccccccccccccc
Confidence 888877754 210 00100 00012344554 443 799999999887 333322211
Q ss_pred ----------------cCCeEEEEEccCCCEEEEEecCC-------------------cEEEEEECCCcceeeEEecc--
Q psy3710 185 ----------------EAPLSCIALNQTGTRLATASYKG-------------------TLIRVFDTGSGQKLNELRRG-- 227 (424)
Q Consensus 185 ----------------~~~v~~~~~~~~~~~l~~~~~d~-------------------~~i~iwd~~~~~~~~~~~~~-- 227 (424)
......++++|++..++.+..++ . |..+|.++++.+..++..
T Consensus 226 ~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s-v~AlD~~TG~~~W~~~~~~~ 304 (677)
T 1kb0_A 226 ARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS-IVALDPDTGKYKWHYQETPG 304 (677)
T ss_dssp HTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE-EEEECTTTCCEEEEEESSTT
T ss_pred cccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE-EEEEECCCCCEEEEEecCCC
Confidence 11123578889888888877653 5 999999999998777632
Q ss_pred ----------eeeeeecCCCC--eEEEEeecCCeEEEEeCCCCCCCCeeecc----------CCCCe-------------
Q psy3710 228 ----------LCVLCPNSNNS--LLAFPGRKSGHVHLVDLADPERPPLDIAA----------HEAPL------------- 272 (424)
Q Consensus 228 ----------~~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~~v------------- 272 (424)
........+++ .+++.++.+|.++++|..+++.....-.. ...++
T Consensus 305 d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~ 384 (677)
T 1kb0_A 305 DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQD 384 (677)
T ss_dssp CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEE
T ss_pred cccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccE
Confidence 11112222443 56667999999999999988742111000 00011
Q ss_pred -----------EEEEEcCCCCEEEEEeCC-------------------------------------------CcEEEEEE
Q psy3710 273 -----------SCIALNQTGTRLATASYK-------------------------------------------GTLIRVFD 298 (424)
Q Consensus 273 -----------~~~~~~~~~~~l~~~~~d-------------------------------------------~~~i~iwd 298 (424)
..++++|++.++++...+ +. |..||
T Consensus 385 ~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~-l~A~D 463 (677)
T 1kb0_A 385 AVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGR-LLAWD 463 (677)
T ss_dssp CSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEE-EEEEE
T ss_pred ECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccE-EEEEe
Confidence 257889988888775432 66 99999
Q ss_pred CCCCceeeeec-----------cCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 299 TGSGQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 299 ~~~~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
+.+++.+.++. .++.+++.++.||.+++||..+++.+.+
T Consensus 464 ~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 464 PVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp TTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 99999888753 3567888899999999999999987654
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=6.9e-11 Score=101.39 Aligned_cols=221 Identities=10% Similarity=0.040 Sum_probs=150.2
Q ss_pred cCCceEEEEECCCCC-eeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEE
Q psy3710 9 YKNGLLYAGFNQDQG-CFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWD 86 (424)
Q Consensus 9 h~~~V~~~~~s~~g~-~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd 86 (424)
+..---+..|+|++. ++++...++ |..||.++++... .. ....+..+.+.++++.++ +. ++.|.+||
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~~~~i~~~~dG~l~v-~~--------~~~l~~~d 79 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-VT-MDAPVSSVALRQSGGYVA-TI--------GTKFCALN 79 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EE-CSSCEEEEEEBTTSSEEE-EE--------TTEEEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-Ee-CCCceEEEEECCCCCEEE-EE--------CCeEEEEE
Confidence 344556789999654 455665555 9999988765421 22 256788899999999444 33 36899999
Q ss_pred CCCCcEEEEEee-----cCCeEEEEecCCceEEEee------------ccEEEEeecCCCceeEEEeeCCCCCeeEEEee
Q psy3710 87 DLKKQVVICLEF-----NAPVKGVRLRRDKIVVVLE------------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 87 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~------------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
.++++....... ...+..++++|++.+.+++ ..-.+|.+...++........ .....+++
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~---~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV---DISNGLDW 156 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE---SBEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc---ccccceEE
Confidence 988775443332 1347889999999766652 234666665344333322221 22467899
Q ss_pred cCCCCeEEEeeccCCeEEEEeCC--CCCCC-----CcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceee
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLA--DPERP-----PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN 222 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~ 222 (424)
+|+++.|+++.+.++.|..|++. ++ .. ...+..+......+++.++|++.++....+. |..||..+++.+.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G-~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTG-QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQ 234 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTC-CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCC-cccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEE
Confidence 99999887657778999999974 32 11 1122234456789999999987777777788 9999999898888
Q ss_pred EEecc---eeeeeec-CCCCeEEEEee
Q psy3710 223 ELRRG---LCVLCPN-SNNSLLAFPGR 245 (424)
Q Consensus 223 ~~~~~---~~~~~~~-~~~~~~~~~~~ 245 (424)
.+..+ ...++|. |+++.++++..
T Consensus 235 ~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 87754 5677787 77777777554
No 214
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=2.8e-11 Score=104.75 Aligned_cols=232 Identities=10% Similarity=0.064 Sum_probs=151.0
Q ss_pred CeeeEEEeccCceEEE-------EeCCcCCCcCCCeEEEEECCCCcEEEEEe-----ecCCeEEEEecCC-ceEEEe--e
Q psy3710 53 GLGHVEMLFRCNYLAL-------VGGGTHPKYPNNRVMIWDDLKKQVVICLE-----FNAPVKGVRLRRD-KIVVVL--E 117 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~-------~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~~~~--~ 117 (424)
....++|.+++..+++ .. .++.|.+||..+++...... +...+.+++++++ +.+.++ .
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~-------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGK-------PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTE-------ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred CccCceECCCCCEEEEEeccccCCC-------CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 3457888888876655 12 36899999988887654332 3467899999999 765554 4
Q ss_pred ccEEEEeecCCCceeEE-EeeCC--CCCeeEEEeecCCCCeEEEeeccC---------------CeEEEEeCCCCCCCCc
Q psy3710 118 GLIKVYTFIQCPQQLHV-FETNP--NPKGLCVLCPNSNNSLLAFPGRKS---------------GHVHLVDLADPERPPL 179 (424)
Q Consensus 118 ~~i~v~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~~~~d---------------g~i~i~d~~~~~~~~~ 179 (424)
+.|.+||.. ++.... ..... ....+..++++++++++++ ...+ +.|..|+.. + + ..
T Consensus 92 ~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g-~-~~ 165 (314)
T 1pjx_A 92 LGLLVVQTD--GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWIT-APAGEVAPADYTRSMQEKFGSIYCFTTD-G-Q-MI 165 (314)
T ss_dssp TEEEEEETT--SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEE-ECBCBCTTSCCCBTTSSSCEEEEEECTT-S-C-EE
T ss_pred CCEEEEeCC--CCEEEEEeccCCCccccCCcCEEECCCCCEEEE-ecCcccccccccccccCCCCeEEEECCC-C-C-EE
Confidence 578888874 333221 11111 1123567888999987776 4443 567777755 2 2 22
Q ss_pred ccccccCCeEEEEEc----cCCCEEEEE-ecCCcEEEEEECC-Ccce-----eeEEe----cceeeeeecCCCCeEEEEe
Q psy3710 180 DIAAHEAPLSCIALN----QTGTRLATA-SYKGTLIRVFDTG-SGQK-----LNELR----RGLCVLCPNSNNSLLAFPG 244 (424)
Q Consensus 180 ~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~~i~iwd~~-~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~ 244 (424)
.+..+......++++ |+++.++.+ ..++. |.+||.. +++. ...+. .....+++++++. ++++.
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~ 243 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVAN 243 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEE
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEE
Confidence 333344567899999 999766555 45677 9999976 3431 22222 2245678888875 44446
Q ss_pred ecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCC
Q psy3710 245 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGS 301 (424)
Q Consensus 245 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~ 301 (424)
..++.|.+||..+++. ...+..+...+.+++|+|+++.|+.++ .++. |..|++..
T Consensus 244 ~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-l~~~~~~~ 299 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQP-KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA-VWKFEWQR 299 (314)
T ss_dssp ETTTEEEEECTTCBSC-SEEEECSSSCEEEEEECTTSSEEEEEETTTTE-EEEEECSS
T ss_pred cCCCEEEEEcCCCCcE-eEEEeCCCCCceeEEECCCCCEEEEEeCCCCe-EEEEeCCC
Confidence 6788999999885543 344455667899999999998555544 4566 88888764
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.47 E-value=3.5e-11 Score=115.02 Aligned_cols=262 Identities=14% Similarity=0.150 Sum_probs=167.5
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCC------------eEEEEecCCceEEEe-eccEEEEeecCCC
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP------------VKGVRLRRDKIVVVL-EGLIKVYTFIQCP 129 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------v~~~~~~~~~~~~~~-~~~i~v~~~~~~~ 129 (424)
+..+++.+ .++.|..+|.++|+.+.++..... -..+.+..+..++.+ ++.|..+|.+ ++
T Consensus 70 ~g~vyv~~-------~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~-TG 141 (689)
T 1yiq_A 70 DGVMYTTG-------PFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAK-TG 141 (689)
T ss_dssp TTEEEEEC-------GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETT-TC
T ss_pred CCEEEEEc-------CCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECC-CC
Confidence 55555555 368999999999999998863221 122344444455555 8999999986 78
Q ss_pred ceeEEEeeCCCCCeeEEEeecC---CCCeEEEeec------cCCeEEEEeCCCCCCCCccccc-----------------
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNS---NNSLLAFPGR------KSGHVHLVDLADPERPPLDIAA----------------- 183 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~----------------- 183 (424)
+.+..+...........+..+| ++. +++ +. .+|.|..||..++ +.+-.+..
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~v-g~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNGK-VVI-GNGGAEFGVRGYVTAYDAETG-KEAWRFYTVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETTE-EEE-CCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred CEeeeecCcCCCCCCccccCCcEEECCE-EEE-EeCCCccCCCCEEEEEECCCC-cEEEEecccCCCccccccccccccc
Confidence 8887776530110000011111 444 444 33 3789999999987 33322221
Q ss_pred --------------ccCCeEEEEEccCCCEEEEEecCC-------------------cEEEEEECCCcceeeEEecce--
Q psy3710 184 --------------HEAPLSCIALNQTGTRLATASYKG-------------------TLIRVFDTGSGQKLNELRRGL-- 228 (424)
Q Consensus 184 --------------~~~~v~~~~~~~~~~~l~~~~~d~-------------------~~i~iwd~~~~~~~~~~~~~~-- 228 (424)
+......++++|++..++.+..++ . |..+|.++++.+..++...
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~-v~AlD~~TG~~~W~~~~~~~d 297 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS-IVAVNADTGEYVWHYQTTPGD 297 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE-EEEEETTTCCEEEEEESSTTC
T ss_pred ccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee-EEEEEccCCceeEeeecCCcc
Confidence 111113578888888888887764 5 8999999999988776420
Q ss_pred ----------eeeeecCCCC--eEEEEeecCCeEEEEeCCCCCCCCeeec---------------------------cCC
Q psy3710 229 ----------CVLCPNSNNS--LLAFPGRKSGHVHLVDLADPERPPLDIA---------------------------AHE 269 (424)
Q Consensus 229 ----------~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~---------------------------~~~ 269 (424)
.......++. .+++.++.+|.++++|.++++.....-. ...
T Consensus 298 ~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 298 AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGK 377 (689)
T ss_dssp CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSS
T ss_pred cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCC
Confidence 0111111332 3566689999999999998874211000 000
Q ss_pred C-----------CeEEEEEcCCCCEEEEEeC---------------------------------------------CCcE
Q psy3710 270 A-----------PLSCIALNQTGTRLATASY---------------------------------------------KGTL 293 (424)
Q Consensus 270 ~-----------~v~~~~~~~~~~~l~~~~~---------------------------------------------d~~~ 293 (424)
. .-..++|+|+..++++... +|.
T Consensus 378 ~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~- 456 (689)
T 1yiq_A 378 RNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGK- 456 (689)
T ss_dssp CEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEE-
T ss_pred eeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCccee-
Confidence 0 0123788998887776532 367
Q ss_pred EEEEECCCCceeeeec-----------cCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 294 IRVFDTGSGQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 294 i~iwd~~~~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
|+.||+.+|+.+.++. ..+.+++.++.||.++.||.++|+.+-+
T Consensus 457 l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 457 LIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 9999999999888753 3567888999999999999999987643
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=2e-10 Score=98.54 Aligned_cols=225 Identities=13% Similarity=0.056 Sum_probs=148.9
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe-eccEEEEeecCCCcee
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQL 132 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~ 132 (424)
-....|.++.+.++.+... ++.|..||..+++. ..+.....+.++++++++.+++. ++.|.+||.. +++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~------~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~-~g~~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP------AKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWK-EQSAV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETT------TTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETT-TTEEE
T ss_pred ccCCeEECCCCEEEEEECC------CCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECC-CCcEE
Confidence 3457888887777777643 68999999988765 45566788999999999876665 7789999975 44433
Q ss_pred EEEeeCC--CCCeeEEEeecCCCCeEEEeecc--------CCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEE
Q psy3710 133 HVFETNP--NPKGLCVLCPNSNNSLLAFPGRK--------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 133 ~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~--------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 202 (424)
....... .......+.++|+|++++.+... ...-.+|.+... .....+..+......++|+|+++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 2222211 12346778899999977652221 123345544432 222333344455789999999987754
Q ss_pred -EecCCcEEEEEEC--CCccee-----eEEe---cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCC
Q psy3710 203 -ASYKGTLIRVFDT--GSGQKL-----NELR---RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAP 271 (424)
Q Consensus 203 -~~~d~~~i~iwd~--~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 271 (424)
.+.++. |..|++ .++... ..+. .....+++++++. +.++....+.|..||..+++ ....+..+...
T Consensus 166 ~~~~~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~-~~~~i~~p~~~ 242 (297)
T 3g4e_A 166 IDSLSYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGK-RLQTVKLPVDK 242 (297)
T ss_dssp EEGGGTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCC-EEEEEECSSSB
T ss_pred ecCCCCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCce-EEEEEECCCCC
Confidence 455677 999987 455432 1222 1246678888884 55556678899999998765 34455556678
Q ss_pred eEEEEEc-CCCCEEEEEeCC
Q psy3710 272 LSCIALN-QTGTRLATASYK 290 (424)
Q Consensus 272 v~~~~~~-~~~~~l~~~~~d 290 (424)
+++++|. |+++.|+.++..
T Consensus 243 ~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 243 TTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEEESGGGCEEEEEEBC
T ss_pred ceEEEEeCCCCCEEEEEcCC
Confidence 9999998 888877666554
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.46 E-value=7.1e-12 Score=109.45 Aligned_cols=257 Identities=10% Similarity=-0.029 Sum_probs=168.0
Q ss_pred eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCC---CcCCCeEEEEECCCCcEEEEEeec--------C
Q psy3710 32 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHP---KYPNNRVMIWDDLKKQVVICLEFN--------A 100 (424)
Q Consensus 32 ~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~---~~~d~~i~iwd~~~~~~~~~~~~~--------~ 100 (424)
.|.++|.++++.+........+ .+.++|+++.++++...... ...++.|.+||..+++.+.++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 5789999999887665544444 69999999999888621000 002589999999999999999854 3
Q ss_pred CeEEEEecCCceEEEe-----eccEEE--EeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCC
Q psy3710 101 PVKGVRLRRDKIVVVL-----EGLIKV--YTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD 173 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~-----~~~i~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~ 173 (424)
....++++||+.++.. +..+.+ +|.. + +..+.... + +...|+++..+.+.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~-t---v~~i~v~~----~--~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS-D---DQLTKSAS----C--FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTE-E---EEEEECSS----C--CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchh-h---ceEEECCC----c--eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 5778999999965553 246888 8876 3 44444321 1 122344544444467788888888876
Q ss_pred ----CCCCC----cccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcc--eeeEEe-------------cceee
Q psy3710 174 ----PERPP----LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ--KLNELR-------------RGLCV 230 (424)
Q Consensus 174 ----~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~--~~~~~~-------------~~~~~ 230 (424)
..+.. ..+.....+. . .+++..++..+. +. +.+.|..+.. .+..+. .+...
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~-V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 268 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SS-ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM 268 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SC-CEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CE-EEEEECCCCcceEEEEEEeccccccccccccCccee
Confidence 11221 1111223333 3 666666666666 88 9999986542 222221 12233
Q ss_pred eeecCCCCeEEEEee-c-------CCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCE-EEEEe-CCCcEEEEEECC
Q psy3710 231 LCPNSNNSLLAFPGR-K-------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTR-LATAS-YKGTLIRVFDTG 300 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~-~-------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-~d~~~i~iwd~~ 300 (424)
++++++++.++++.. . ++.+.++|+.+.+. ...+... .....++|+|||++ +++.. .++. |.++|+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v-v~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~-VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-SGPISNG-HDSDAIIAAQDGASDNYANSAGTEV-LDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-EECCEEE-EEECEEEECCSSSCEEEEEETTTTE-EEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE-EEEEECC-CCcceEEECCCCCEEEEEccCCCCe-EEEEECC
Confidence 679999999888544 2 23566999998764 3333222 25889999999985 55555 4888 9999999
Q ss_pred CCceeeeec
Q psy3710 301 SGQKLNELR 309 (424)
Q Consensus 301 ~~~~~~~~~ 309 (424)
+++.+.++.
T Consensus 346 t~kvv~~I~ 354 (368)
T 1mda_H 346 SDQDQSSVE 354 (368)
T ss_dssp SCEEEEECC
T ss_pred CCcEEEEEE
Confidence 999988775
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.46 E-value=7.8e-11 Score=105.52 Aligned_cols=231 Identities=9% Similarity=0.009 Sum_probs=152.1
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
.....++|+++|+++++...++ |++||.++++....... ..... +++.++++.++.+.... ...|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEG-----THTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSST-----TCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCC-----CceEEEEEcCC
Confidence 4678999999999777776655 99999987666433332 22223 89999999888777431 23899999876
Q ss_pred CcEEEEE----e-ecCCeEEEEecC-CceEEEe--eccEEEEeecCCCceeEEEee--CCCCCee--E-EEeecCCCCeE
Q psy3710 90 KQVVICL----E-FNAPVKGVRLRR-DKIVVVL--EGLIKVYTFIQCPQQLHVFET--NPNPKGL--C-VLCPNSNNSLL 156 (424)
Q Consensus 90 ~~~~~~~----~-~~~~v~~~~~~~-~~~~~~~--~~~i~v~~~~~~~~~~~~~~~--~~~~~~~--~-~~~~~~~~~~l 156 (424)
+.....+ . ....+.+++++| ++.+++. ++.|+.||.. ... ...+.. ....... . .++++|++..|
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~-~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVK-TQE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETT-TCC-EEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECC-CCC-EEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 6654444 2 345678899999 6665556 5679999975 333 222211 1101111 2 78889965555
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccccc---------------cCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcce
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAH---------------EAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQK 220 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~ 220 (424)
+++...++.|+.|+.... ...+.++ -.....++++|+|+++++-. .++. |+.|++.+++.
T Consensus 282 yv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 282 YMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 554778899999997642 2222222 13478999999999777776 7788 99999877764
Q ss_pred eeEEec-----------------ceeeeeecCCCCeEEEEeecCCeEEEEeC
Q psy3710 221 LNELRR-----------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDL 255 (424)
Q Consensus 221 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~ 255 (424)
...... ....++++++ ..++++...++.|+.+++
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 332221 1455777777 456665777777777664
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=4.5e-12 Score=110.94 Aligned_cols=170 Identities=10% Similarity=0.058 Sum_probs=125.8
Q ss_pred ceEEEEECCCCCeeEeecCCeEEEEeCCcCc---------ccc-cccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCe
Q psy3710 12 GLLYAGFNQDQGCFACGMEDGFRIYNCDPLK---------EKE-RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR 81 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~---------~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~ 81 (424)
.++.+++++...++++|+.+++++|+++... ... ......+ |..++| +++.|+++. ++.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~--------~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVST--------RNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEE--------SSE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEc--------CCc
Confidence 6899999999999999999999999976544 111 1112344 999999 888888773 689
Q ss_pred EEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 82 VMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 82 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
|++||+.+........ +..++.++.+.+....++. ||.+.+||++ ...... +. ..+.+++|+|+| +++
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~-~~~~~~-~~-----~~Vs~v~WSpkG--~~v- 177 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR-TKSTKQ-LA-----QNVTSFDVTNSQ--LAV- 177 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETT-TCCEEE-EE-----ESEEEEEECSSE--EEE-
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEcc-CCcccc-cc-----CCceEEEEcCCc--eEE-
Confidence 9999988766554444 6778888888766544444 9999999996 444432 21 248899999999 565
Q ss_pred eccCCeEEEEeCCCCCCC-Cccc------c---cccCCeEEEEEccCCCEEEE
Q psy3710 160 GRKSGHVHLVDLADPERP-PLDI------A---AHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~-~~~~------~---~~~~~v~~~~~~~~~~~l~~ 202 (424)
|..||.+++|+....... ...+ . +|...|.++.|.+++.++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 899999999988764210 2223 2 37889999999999887765
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=2e-10 Score=102.88 Aligned_cols=192 Identities=12% Similarity=0.029 Sum_probs=133.0
Q ss_pred CeEEEEecCCceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCC--eEEEEeCCCCC
Q psy3710 101 PVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSG--HVHLVDLADPE 175 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg--~i~i~d~~~~~ 175 (424)
.+..+++++++.++++ ++.|++||.. .+........... .. ++++++++.|++ +..++ .|.+++....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~-~g~~~~~~~~~~~---~~-ia~~~~g~~l~~-~d~~~~~~I~~~d~~~~- 204 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVD-DNKVTTVHPGFKG---GK-PAVTKDKQRVYS-IGWEGTHTVYVYMKASG- 204 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETT-TTEEEEEEETCCB---CB-CEECTTSSEEEE-EBSSTTCEEEEEEGGGT-
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECC-CCEEEEeeccCCC---Cc-eeEecCCCcEEE-EecCCCceEEEEEcCCC-
Confidence 5788999999987776 4689999985 4444433333221 22 788999998887 55544 8999988764
Q ss_pred CCCccc----ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeE----Eec--ce--e-eeeecCCCCeEEE
Q psy3710 176 RPPLDI----AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE----LRR--GL--C-VLCPNSNNSLLAF 242 (424)
Q Consensus 176 ~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~----~~~--~~--~-~~~~~~~~~~~~~ 242 (424)
.....+ ......+.+++++|++..|+.+..++. |+.||..++..... ... .. . .++++|++..+++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~-I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKN-FGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCE-EEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCc-EEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 222222 214466789999995556666777888 99999987753322 111 12 2 7899998888888
Q ss_pred EeecCCeEEEEeCCCCCCCCeeeccC---------------CCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCCCce
Q psy3710 243 PGRKSGHVHLVDLADPERPPLDIAAH---------------EAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQK 304 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~ 304 (424)
+...++.|+.|+.... ...+.++ -.....++++|+|+++++-. .++. |+.|++.+++.
T Consensus 284 ~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 7888999999997643 2222222 24578999999999777766 6777 99999877764
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.41 E-value=1.2e-10 Score=111.00 Aligned_cols=272 Identities=13% Similarity=0.120 Sum_probs=173.8
Q ss_pred eeEeecCCe-EEEEeCCcCcccccccccCCC---------eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEE
Q psy3710 24 CFACGMEDG-FRIYNCDPLKEKERQDFTDGG---------LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVV 93 (424)
Q Consensus 24 ~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~ 93 (424)
.+.+++.++ |.-+|..+++.+......... +..-.....+..+++.+ .|+.|..+|.++|+.+
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~-------~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA-------WDGRLIALDAATGKEV 151 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCCEE
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc-------CCCEEEEEECCCCCEE
Confidence 444444445 888999888876554432110 11111222455666555 4799999999999999
Q ss_pred EEEeec-C-----CeE-EEEecCCceEEEe-------eccEEEEeecCCCceeEEEeeCCCCC-----------------
Q psy3710 94 ICLEFN-A-----PVK-GVRLRRDKIVVVL-------EGLIKVYTFIQCPQQLHVFETNPNPK----------------- 142 (424)
Q Consensus 94 ~~~~~~-~-----~v~-~~~~~~~~~~~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~----------------- 142 (424)
.++... . .+. ...+..+..++.. ++.|+.||.. +++.+..+.......
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAE-TGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECC-CCcEEEEeccCCCCcccccccccccccccccc
Confidence 988743 1 222 1222233333333 4789999986 788777766433210
Q ss_pred -------------eeEEEeecCCCCeEEEeeccCC-------------------eEEEEeCCCCCCCCccccc--cc---
Q psy3710 143 -------------GLCVLCPNSNNSLLAFPGRKSG-------------------HVHLVDLADPERPPLDIAA--HE--- 185 (424)
Q Consensus 143 -------------~~~~~~~~~~~~~l~~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~--~~--- 185 (424)
....+++++++..+++ +..++ .|..+|..++ +.+..++. |.
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG-~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG-KYKWHYQETPGDNWD 308 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESSTTCCSC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCC-CEEEEEecCCCcccc
Confidence 0013566778888877 65553 5999999987 44433332 21
Q ss_pred ----CCeEEEEEccCC---CEEEEEecCCcEEEEEECCCcceeeEEecce------------------------------
Q psy3710 186 ----APLSCIALNQTG---TRLATASYKGTLIRVFDTGSGQKLNELRRGL------------------------------ 228 (424)
Q Consensus 186 ----~~v~~~~~~~~~---~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~------------------------------ 228 (424)
....-+....+| +.++.++.+|. ++++|.++++.+..++...
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 122233334477 67899999999 9999999999887665210
Q ss_pred --------eeeeecCCCCeEEEEeec------------------------------------------CCeEEEEeCCCC
Q psy3710 229 --------CVLCPNSNNSLLAFPGRK------------------------------------------SGHVHLVDLADP 258 (424)
Q Consensus 229 --------~~~~~~~~~~~~~~~~~~------------------------------------------dg~i~i~d~~~~ 258 (424)
..++++|+...+++.... .|.|..||+.++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 134667777777663321 278999999987
Q ss_pred CCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 259 ERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 259 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
+..-. . .+..++....+..++..++.++.|+. +++||.++|+.+.++.
T Consensus 468 ~~~W~-~-~~~~~~~~g~~~~~g~~v~~g~~dg~-l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 468 KAAWS-V-EHVSPWNGGTLTTAGNVVFQGTADGR-LVAYHAATGEKLWEAP 515 (677)
T ss_dssp EEEEE-E-EESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred cEEee-c-CCCCCCcCcceEeCCCEEEEECCCCc-EEEEECCCCceeeeee
Confidence 74322 2 23344555566777888999999999 9999999999999874
No 222
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.40 E-value=1.3e-10 Score=111.02 Aligned_cols=274 Identities=15% Similarity=0.120 Sum_probs=170.9
Q ss_pred CCeeEeecCCe-EEEEeCCcCcccccccccCCC---------eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 22 QGCFACGMEDG-FRIYNCDPLKEKERQDFTDGG---------LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 22 g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
+..+.+++.++ |.-+|..+++.+......... .........+..+++.+ .|+.|..+|.++|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~-------~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV-------LDGRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc-------cCCEEEEEECCCCC
Confidence 34455555555 999999998886554432110 00011122455565555 47999999999999
Q ss_pred EEEEEeec-C--CeEEEEecC---CceEEEe--------eccEEEEeecCCCceeEEEeeCC-CCC--------------
Q psy3710 92 VVICLEFN-A--PVKGVRLRR---DKIVVVL--------EGLIKVYTFIQCPQQLHVFETNP-NPK-------------- 142 (424)
Q Consensus 92 ~~~~~~~~-~--~v~~~~~~~---~~~~~~~--------~~~i~v~~~~~~~~~~~~~~~~~-~~~-------------- 142 (424)
.+.++... . ....+..+| ++.+++. ++.|..||.+ +++.+..+.... .+.
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 221 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE-TGKEAWRFYTVPGDPKLPPEGKGMEIAAKT 221 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCCSHHHHHHHTT
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC-CCcEEEEecccCCCcccccccccccccccc
Confidence 99887743 1 111111122 4444442 4789999986 788777665321 000
Q ss_pred --------------eeEEEeecCCCCeEEEeeccCC-------------------eEEEEeCCCCCCCCccccc--cc--
Q psy3710 143 --------------GLCVLCPNSNNSLLAFPGRKSG-------------------HVHLVDLADPERPPLDIAA--HE-- 185 (424)
Q Consensus 143 --------------~~~~~~~~~~~~~l~~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~--~~-- 185 (424)
....++++|+...+++ +..++ .|..+|.+++ +.+-.++. |.
T Consensus 222 ~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG-~~~W~~~~~~~d~w 299 (689)
T 1yiq_A 222 WFGDAYVEQGGGGTAWDSFAYDPELNLLYI-GVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTG-EYVWHYQTTPGDAW 299 (689)
T ss_dssp CCSSTHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTC-CEEEEEESSTTCCS
T ss_pred cCCceeeecCCCCccccceeEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEEccCC-ceeEeeecCCcccc
Confidence 0013567788888887 77665 3999999987 44444332 21
Q ss_pred -----CCeEEEEEccCCC---EEEEEecCCcEEEEEECCCcceeeEEecc------------------------------
Q psy3710 186 -----APLSCIALNQTGT---RLATASYKGTLIRVFDTGSGQKLNELRRG------------------------------ 227 (424)
Q Consensus 186 -----~~v~~~~~~~~~~---~l~~~~~d~~~i~iwd~~~~~~~~~~~~~------------------------------ 227 (424)
.+........+|+ .++.++.+|. ++++|.++++.+...+..
T Consensus 300 d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~ 378 (689)
T 1yiq_A 300 DYTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKR 378 (689)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSC
T ss_pred cccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCe
Confidence 2222223333564 7888999999 999999999987433211
Q ss_pred ------------eeeeeecCCCCeEEEEeec--------------------------------------------CCeEE
Q psy3710 228 ------------LCVLCPNSNNSLLAFPGRK--------------------------------------------SGHVH 251 (424)
Q Consensus 228 ------------~~~~~~~~~~~~~~~~~~~--------------------------------------------dg~i~ 251 (424)
...++++|+...+++.... +|.|+
T Consensus 379 ~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~ 458 (689)
T 1yiq_A 379 NLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI 458 (689)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred eEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence 0125667777766653211 37899
Q ss_pred EEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 252 LVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 252 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
.||+.+++..- ....+ .+...-.+...+.+++.++.|+. ++.||.++|+.+.++.
T Consensus 459 A~D~~tG~~~W-~~~~~-~~~~~g~~~tagglvf~gt~dg~-l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 459 AWDPVKQQAAW-EVPYV-TIFNGGTLSTAGNLVFEGSADGR-VIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEETTTTEEEE-EEEES-SSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred EEECCCCCeEe-EccCC-CCccCccceECCCEEEEECCCCc-EEEEECCCCccceeee
Confidence 99999887432 22222 33333456667889999999999 9999999999998764
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.38 E-value=5.8e-09 Score=91.59 Aligned_cols=217 Identities=12% Similarity=0.097 Sum_probs=137.3
Q ss_pred CeEEEEECCC-----CcEEEEEeec---CCeEEEEe-----------c--CCceEEEe----eccEEEEeecCCC---ce
Q psy3710 80 NRVMIWDDLK-----KQVVICLEFN---APVKGVRL-----------R--RDKIVVVL----EGLIKVYTFIQCP---QQ 131 (424)
Q Consensus 80 ~~i~iwd~~~-----~~~~~~~~~~---~~v~~~~~-----------~--~~~~~~~~----~~~i~v~~~~~~~---~~ 131 (424)
..|.+-|+.. ++.+..+..+ .....+.| + +++.++.. ++.|+++|+.... +.
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~ 122 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKI 122 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCcee
Confidence 4566666665 7777776632 24444445 6 67766654 7899999986332 34
Q ss_pred eEEEee-----CCCCCeeEEEeecCCCCeEEEeeccC------CeEEEEeCCCCCCCCccccccc---CCeEEEEEccCC
Q psy3710 132 LHVFET-----NPNPKGLCVLCPNSNNSLLAFPGRKS------GHVHLVDLADPERPPLDIAAHE---APLSCIALNQTG 197 (424)
Q Consensus 132 ~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~d------g~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~ 197 (424)
..+++. ..+...-..+...|+| .+++ +..+ |.|.++|.++. +.+..+.... .--..+-|+|++
T Consensus 123 ~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs-~~g~~~g~~~g~v~vlD~~T~-~v~~~~~~~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 123 IKVIEPEEVKKVSGYSRLHTVHCGPDA-IYIS-ALGNEEGEGPGGILMLDHYSF-EPLGKWEIDRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp EEEECHHHHHHHHCEEEEEEEEECSSC-EEEE-EEEETTSCSCCEEEEECTTTC-CEEEECCSBCTTCCCCCCEEEETTT
T ss_pred eeeechhhcccccCCCcccceeECCCe-EEEE-cCCCcCCCCCCeEEEEECCCC-eEEEEEccCCCCccccceEEECCCC
Confidence 444420 0011123455678999 5444 4444 78999999986 5555554221 223468889999
Q ss_pred CEEEEEe-------------------cCCcEEEEEECCCcceeeEEecc-----eee--eeecCCCCeEEEEee-----c
Q psy3710 198 TRLATAS-------------------YKGTLIRVFDTGSGQKLNELRRG-----LCV--LCPNSNNSLLAFPGR-----K 246 (424)
Q Consensus 198 ~~l~~~~-------------------~d~~~i~iwd~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~-----~ 246 (424)
+.+++.. .+.+ |.+||+.+++.+.++..+ ... ++++|+++..+++.. .
T Consensus 200 ~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~-V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L 278 (462)
T 2ece_A 200 EVLVSSEWAVPNTIEDGLKLEHLKDRYGNR-IHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL 278 (462)
T ss_dssp TEEEECBCCCHHHHTTCCCTTTHHHHSCCE-EEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC
T ss_pred CEEEEccCcCccccccccchhhhhhccCCE-EEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC
Confidence 9888885 2566 999999998888887753 122 345999999888777 7
Q ss_pred CCeEEEEeCCCCCCCC-e-----------eec-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 247 SGHVHLVDLADPERPP-L-----------DIA-------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 247 dg~i~i~d~~~~~~~~-~-----------~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+++|.+|....+.-.. . .+. +-......+.+||||++|+++......|.+||+.
T Consensus 279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 8888776654321000 0 000 0024577889999999988887744338888875
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.37 E-value=1.1e-09 Score=96.09 Aligned_cols=219 Identities=14% Similarity=0.136 Sum_probs=145.7
Q ss_pred ccCceEEEEeCCcCCCcCCCeEEEEECCCC----cEEEEEe--------ecCCeEEEEecCCceEEEe--e------ccE
Q psy3710 61 FRCNYLALVGGGTHPKYPNNRVMIWDDLKK----QVVICLE--------FNAPVKGVRLRRDKIVVVL--E------GLI 120 (424)
Q Consensus 61 ~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~--------~~~~v~~~~~~~~~~~~~~--~------~~i 120 (424)
.+.+++++.+.. +++|.++|+.+. +.++.++ .......+...|++.++.. + +.|
T Consensus 93 ~~r~~l~v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeE
Confidence 667777776654 689999998755 6667663 1225677888999966654 3 579
Q ss_pred EEEeecCCCceeEEEeeCCCCCe-eEEEeecCCCCeEEEee------------------ccCCeEEEEeCCCCCCCCccc
Q psy3710 121 KVYTFIQCPQQLHVFETNPNPKG-LCVLCPNSNNSLLAFPG------------------RKSGHVHLVDLADPERPPLDI 181 (424)
Q Consensus 121 ~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~------------------~~dg~i~i~d~~~~~~~~~~~ 181 (424)
.++|.+ +.+.+..++....+.. ...+.++|+++.++++- .....|.+||+.++ +...++
T Consensus 167 ~vlD~~-T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~~tI 244 (462)
T 2ece_A 167 LMLDHY-SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRIHSL 244 (462)
T ss_dssp EEECTT-TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEEEEE
T ss_pred EEEECC-CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEeeEE
Confidence 999986 7788887764433321 22467799999888731 24789999999975 444444
Q ss_pred ccc--cCCeEEEEE--ccCCCEEEEEec-----C-CcEEEEEECCCcce--eeEE---------------------ecce
Q psy3710 182 AAH--EAPLSCIAL--NQTGTRLATASY-----K-GTLIRVFDTGSGQK--LNEL---------------------RRGL 228 (424)
Q Consensus 182 ~~~--~~~v~~~~~--~~~~~~l~~~~~-----d-~~~i~iwd~~~~~~--~~~~---------------------~~~~ 228 (424)
..- ......+.| +|++++++.++. . ++ |.+|....++. .+.+ ....
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 331 123445555 999999888876 4 45 77665543321 1111 0124
Q ss_pred eeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCC--eeeccC--------------CCCeEEEEEcCCCCEEEEEe
Q psy3710 229 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP--LDIAAH--------------EAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~--~~~~~~--------------~~~v~~~~~~~~~~~l~~~~ 288 (424)
..+.++++++.+.++....+.|.+||+.....+. ..+... ......++++|||++|+++.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 5577899999999988889999999997443221 112111 01357889999999988887
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=2.2e-09 Score=93.24 Aligned_cols=219 Identities=10% Similarity=0.055 Sum_probs=143.3
Q ss_pred ceEEEEECCCCCe-eEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 12 GLLYAGFNQDQGC-FACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 12 ~V~~~~~s~~g~~-la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
.....+|+|++.. ++++..++ |..|+.++++... ... ...+..+.+.++++.++... ..|.+||..+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~-~~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~ 118 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL-PFMGSALAKISDSKQLIASD---------DGLFLRDTAT 118 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC-SSCEEEEEEEETTEEEEEET---------TEEEEEETTT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC-CCcceEEEEeCCCeEEEEEC---------CCEEEEECCC
Confidence 3467899998554 44665545 9999988765432 222 45788899999988776542 4599999988
Q ss_pred CcEEEEEeec-----CCeEEEEecCCceEEEee-------ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEE
Q psy3710 90 KQVVICLEFN-----APVKGVRLRRDKIVVVLE-------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLA 157 (424)
Q Consensus 90 ~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~-------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 157 (424)
++........ ..+..++++|++.+.+++ ....+|.+. +++... +.... .....++++|+++.++
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~~~~~--~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTK-LFADI--SIPNSICFSPDGTTGY 194 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEE-EEEEE--SSEEEEEECTTSCEEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEE-eeCCC--cccCCeEEcCCCCEEE
Confidence 8765433221 357899999999766652 134555554 343322 22211 1245788999999887
Q ss_pred EeeccCCeEEEEeCC--CC-CCC-Cc---ccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---
Q psy3710 158 FPGRKSGHVHLVDLA--DP-ERP-PL---DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG--- 227 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~--~~-~~~-~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~--- 227 (424)
++...++.|.+||+. ++ ... .. .+.........+++.++|.+.++...++. |..||. +++.+..+..+
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~~~~~ 272 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEVPGKQ 272 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEECSCSB
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEECCCCC
Confidence 646678899999986 32 111 11 12223455788999999987777666778 999998 56666666543
Q ss_pred eeeeeec-CCCCeEEEEeecC
Q psy3710 228 LCVLCPN-SNNSLLAFPGRKS 247 (424)
Q Consensus 228 ~~~~~~~-~~~~~~~~~~~~d 247 (424)
+..+++. +++..++++...+
T Consensus 273 ~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 273 TTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEEEESTTSCEEEEEEBCT
T ss_pred cEEEEEecCCCCEEEEEecCC
Confidence 5667787 7777777755444
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=5.8e-10 Score=96.04 Aligned_cols=209 Identities=13% Similarity=0.035 Sum_probs=136.8
Q ss_pred eEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeE
Q psy3710 144 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE 223 (424)
Q Consensus 144 ~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~ 223 (424)
.-...|+++++.|+.++..++.|..|+.. + . ...+..+...+..++++++|+++++...++. |..|+.. ++....
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~-v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-T-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRA-ITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETT-S-C-EEEEEESCSCEEEEEECTTSCEEEEETTTTE-EEEECTT-SCEEEE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-C-EEEEeCCCCccceeeECCCCCEEEEECCCCE-EEEECCC-CCEEEE
Confidence 45678899999666558889999999884 3 2 3455556677899999999987766556677 9999986 543221
Q ss_pred Ee--c-----ceeeeeecCCCCeEEEE---eec-------------CCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCC
Q psy3710 224 LR--R-----GLCVLCPNSNNSLLAFP---GRK-------------SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 280 (424)
Q Consensus 224 ~~--~-----~~~~~~~~~~~~~~~~~---~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 280 (424)
.. . ....+++.+++..++.- |.. .+.|+.+|..+++. ..+. .......++|+||
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEEE-EESSEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEEe-cCCCCcceEEcCC
Confidence 11 1 13457888888755421 221 35688888766542 2222 3456788999999
Q ss_pred CCEEEEEeCC------CcEEEEEECCCCce-----ee----------eeccCCcEEEEEeCCCcEEEEEccccccccccc
Q psy3710 281 GTRLATASYK------GTLIRVFDTGSGQK-----LN----------ELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQS 339 (424)
Q Consensus 281 ~~~l~~~~~d------~~~i~iwd~~~~~~-----~~----------~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 339 (424)
++.|+.+... +. |.+|++..+.. .. .+.++|++.++ +.+ .|.+|+.. ++.+..
T Consensus 199 g~~lyv~~~~~~~~~~~~-i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~-- 272 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVE-ITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGH-- 272 (305)
T ss_dssp SSEEEEEECCC---CCCE-EEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEE--
T ss_pred CCEEEEEecCCcCCCCCE-EEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEE--
Confidence 9988877665 57 99999875431 10 12356664443 344 48888874 343222
Q ss_pred cceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCc
Q psy3710 340 SLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGS 387 (424)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~ 387 (424)
+..+. .+..++|+++++.|++++.++.
T Consensus 273 --------------------~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 273 --------------------IPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp --------------------EECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred --------------------EECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 22222 3568899999999998887643
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.34 E-value=1.2e-10 Score=101.47 Aligned_cols=269 Identities=12% Similarity=0.148 Sum_probs=165.8
Q ss_pred CCeEEEEECCCCcEEEEEee-cCCeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeE
Q psy3710 79 NNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (424)
++.|..|| .+++....... ...+.++...+++.+.+. .+ +..+|. +++.+..+...........+ . +..+
T Consensus 39 ~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~-l~~~d~--~g~~~~~~~~~~~~~~~~~~--~--~~~l 110 (330)
T 3hxj_A 39 NKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK-VYAINP--DGTEKWRFDTKKAIVSDFTI--F--EDIL 110 (330)
T ss_dssp TTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE-EEEECC--CGGGGGGSCC-----CCEEE--E--TTEE
T ss_pred CCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc-EEEECC--CCcEEEEEECCCCcccCceE--E--CCEE
Confidence 67899999 88888776653 334567777777765554 55 777774 44443333222211112222 2 4445
Q ss_pred EEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeee
Q psy3710 157 AFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCP 233 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~ 233 (424)
.+ ++.++.|..+|.. + +.......+...+.++...+++. ++.++.++. |..+|.. ++....+..+ ...+..
T Consensus 111 ~v-~t~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~-l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 111 YV-TSMDGHLYAINTD-G-TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNY-LYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EE-ECTTSEEEEECTT-S-CEEEEEECSSCCCSCCEECTTSC-EEEECTTSE-EEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EE-EecCCEEEEEcCC-C-CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCE-EEEECCC-CCEeEEEecCCCceeeeEE
Confidence 55 7888999999987 4 44444444445566677777765 566777788 9999998 7776666533 333444
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc---
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR--- 310 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~--- 310 (424)
.+++..+ + ++ +.|..+| .+++. ..........+.++..+++|. |..++.++. +..+|. +++.+..+..
T Consensus 185 d~~g~l~-v-~t--~~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~g-l~~~~~-~g~~~~~~~~~~~ 255 (330)
T 3hxj_A 185 GKDGTIY-F-GS--DKVYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGT-IYVTSLDGH-LYAINP-DGTEKWRFKTGKR 255 (330)
T ss_dssp CTTCCEE-E-ES--SSEEEEC-TTSCE-EEEECCSSCCCSCCEECTTSC-EEEEETTTE-EEEECT-TSCEEEEEECSSC
T ss_pred cCCCEEE-E-Ee--CEEEEEC-CCCcE-EEEEccCCcceeceEECCCCe-EEEEcCCCe-EEEECC-CCCEeEEeeCCCC
Confidence 4555533 3 44 8899999 55442 223334446688888888875 555666777 888874 5655554431
Q ss_pred --------CCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEE
Q psy3710 311 --------DSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVI 382 (424)
Q Consensus 311 --------~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 382 (424)
.+..|..++.+|.|..+|. +++.+.. +..+...+..+...++++ |.++
T Consensus 256 ~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~----------------------~~~~~~~~~~~~~d~~g~-l~~g 311 (330)
T 3hxj_A 256 IESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWN----------------------FETGSWIIATPVIDENGT-IYFG 311 (330)
T ss_dssp CCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEE----------------------EECSSCCCSCCEECTTCC-EEEE
T ss_pred ccccceEcCCCeEEEecCCCCEEEECC-CCcEEEE----------------------EEcCCccccceEEcCCCE-EEEE
Confidence 2445677778888888885 4443221 112223344556667765 6779
Q ss_pred eccCcEEEEEec
Q psy3710 383 CADGSYYKFMFN 394 (424)
Q Consensus 383 ~~dg~v~~~~~~ 394 (424)
+.+|.+++....
T Consensus 312 t~~G~~~~~~~~ 323 (330)
T 3hxj_A 312 TRNGKFYALFNL 323 (330)
T ss_dssp CTTSCEEEEEC-
T ss_pred cCCCeEEEEecc
Confidence 999999998765
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=3.9e-09 Score=91.69 Aligned_cols=220 Identities=8% Similarity=-0.065 Sum_probs=142.6
Q ss_pred eeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe-eccEEEEeecCCCceeE
Q psy3710 55 GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLH 133 (424)
Q Consensus 55 ~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~ 133 (424)
....|.+++..++.+... ++.|..||..+++. ..+.....+.++++++++.+++. ...|.+||.. +++..
T Consensus 52 egp~~~~~~~~l~~~d~~------~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~-~g~~~- 122 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNIL------ERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTA-TGVLT- 122 (326)
T ss_dssp EEEEEETTTTEEEEEEGG------GTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETT-TCCEE-
T ss_pred cCCeEeCCCCEEEEEECC------CCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECC-CCcEE-
Confidence 457788887777666643 58999999987754 34556678999999999876665 5568999975 44432
Q ss_pred EEeeCC---CCCeeEEEeecCCCCeEEEeec-----cCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe-
Q psy3710 134 VFETNP---NPKGLCVLCPNSNNSLLAFPGR-----KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS- 204 (424)
Q Consensus 134 ~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 204 (424)
.+.... ....+..+.++|+|++++.+.. ..+.|..++ ++ + ...+..+......++|+|+++.++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-K-VTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-E-EEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-c-EEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 222211 1234678899999987665221 124566666 32 2 233333445578999999998776554
Q ss_pred cCCcEEEEEECC--Cc-ce-----eeEEe---cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeE
Q psy3710 205 YKGTLIRVFDTG--SG-QK-----LNELR---RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLS 273 (424)
Q Consensus 205 ~d~~~i~iwd~~--~~-~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 273 (424)
.++. |.+||+. ++ +. ...+. .....+++++++. +.++...++.|..||.. ++ ....+..+...++
T Consensus 199 ~~~~-I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~-g~-~~~~i~~~~~~~~ 274 (326)
T 2ghs_A 199 KVNR-LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTD-GN-HIARYEVPGKQTT 274 (326)
T ss_dssp TTCE-EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTT-CC-EEEEEECSCSBEE
T ss_pred CCCE-EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCC-CC-EEEEEECCCCCcE
Confidence 4677 9999985 55 32 11221 1245677888875 44445567899999983 33 3344555666799
Q ss_pred EEEEc-CCCCEEEEEeCCC
Q psy3710 274 CIALN-QTGTRLATASYKG 291 (424)
Q Consensus 274 ~~~~~-~~~~~l~~~~~d~ 291 (424)
+++|+ |+++.|+.++..+
T Consensus 275 ~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 275 CPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEESTTSCEEEEEEBCT
T ss_pred EEEEecCCCCEEEEEecCC
Confidence 99998 8887776655443
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=4.8e-10 Score=98.22 Aligned_cols=261 Identities=10% Similarity=0.006 Sum_probs=158.0
Q ss_pred CCceEEEEECCCCCeeEeec--CCe-EEEEeCCcCccccc------ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCC
Q psy3710 10 KNGLLYAGFNQDQGCFACGM--EDG-FRIYNCDPLKEKER------QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNN 80 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~--~~~-i~iw~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~ 80 (424)
...+..++++|+|+.+++.. .++ ++||.++.++.... ...+...+..+.+.++++.+++-.+. ....+.
T Consensus 16 ~~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~--~~~~~~ 93 (343)
T 2qe8_A 16 SLAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN--QSKSVP 93 (343)
T ss_dssp SSCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH--HHTSCC
T ss_pred CCCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC--CcCCCC
Confidence 36789999999999888753 223 56666543432210 11134567888998887755443320 000047
Q ss_pred eEEEEECCCCcEEEEEeec-------CCeEEEEecCC-ceEEEe------eccEEEEeecCCCceeEEEeeCCCCCeeEE
Q psy3710 81 RVMIWDDLKKQVVICLEFN-------APVKGVRLRRD-KIVVVL------EGLIKVYTFIQCPQQLHVFETNPNPKGLCV 146 (424)
Q Consensus 81 ~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~-~~~~~~------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 146 (424)
.|.+||+.+++.+..+..+ ..+..++++++ +.+.++ ++.|.+||+. +++....+..+.....- .
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~-~g~~~r~~~~~~~~~~~-~ 171 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ-TGLAARVLQGYPGIAPE-D 171 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT-TCCEEEECTTCTTTSCC-S
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC-CCCEEEEecCCCccccc-c
Confidence 8999999999988877642 24688999975 454444 3579999985 55555544332111000 0
Q ss_pred EeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECC---Ccc----
Q psy3710 147 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG---SGQ---- 219 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~---~~~---- 219 (424)
..+.+++..+.+ ...+|.+..|. ..+..|+|+|+|+.|+.+...+..+..++.. .+.
T Consensus 172 ~~~~~~g~~~~~-~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 172 IDLVIDGVPVQI-GQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp CCCEETTEECBE-ECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHH
T ss_pred cceeECCEEEEe-ccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChh
Confidence 223345655554 56666665442 2357899999999998888776425555432 110
Q ss_pred -e---eeEE--ecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-cCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy3710 220 -K---LNEL--RRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASYKGT 292 (424)
Q Consensus 220 -~---~~~~--~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 292 (424)
. +... ......+++++++ .++++...++.|.+||..+++. ..... .+...+.+++|.++++++++.+..+.
T Consensus 236 ~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 236 ELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp HHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred hhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCE-EEEEECCceecCCeeEECCCCcEEEEeCcccc
Confidence 0 1111 1234568888886 4556688889999999844431 11111 22456889999999887777766554
No 230
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=2.6e-13 Score=120.02 Aligned_cols=247 Identities=14% Similarity=0.071 Sum_probs=137.5
Q ss_pred cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCc-eEEEe--eccEEEEeecCCCceeEEEeeC
Q psy3710 62 RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK-IVVVL--EGLIKVYTFIQCPQQLHVFETN 138 (424)
Q Consensus 62 ~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~--~~~i~v~~~~~~~~~~~~~~~~ 138 (424)
+++.+++.+ .|+.|+.||..+|+.+.++.. +.+.+..+..++ .+++. ++.|+.||.+ +++.+..+..+
T Consensus 8 ~~~~v~~gs-------~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~-tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVST-------LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK-NNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEE-------TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCC
T ss_pred eCCEEEEEc-------CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECC-CCceeeeeecc
Confidence 456666666 479999999999999998886 555555555666 44442 8999999986 66665554332
Q ss_pred CCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCc
Q psy3710 139 PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 218 (424)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 218 (424)
............ ++..+++ |+.++.++.||..++ +.+..+..+. ...++|++..+++++.++. |+.||.+++
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~-g~~dg~v~a~D~~tG-~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG 150 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYM-GKKQDIWYVIDLLTG-EKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTR 150 (369)
T ss_dssp HHHHHTTCSCC------CCC-CEEEEEEEEECCC---------------------------EEEEEEEEE-EECCCSSSS
T ss_pred CccccccCceEe-cCCEEEE-EeCCCEEEEEECCCC-cEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCC
Confidence 100000000111 3445665 889999999999987 5555554443 2345678889999999999 999999999
Q ss_pred ceeeEEecc-eeeeeecCCC---CeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEE-EEEcCCCCEE----EEEeC
Q psy3710 219 QKLNELRRG-LCVLCPNSNN---SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSC-IALNQTGTRL----ATASY 289 (424)
Q Consensus 219 ~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l----~~~~~ 289 (424)
+.+..+... ....++..+. ..+ +.++.+|.++.||..+++.. -... ...++.. ..++++|... +.+
T Consensus 151 ~~~W~~~~~~~~~~~~~~~~~~~~~v-~~~~~dg~v~a~d~~tG~~~-W~~~-~~~pv~~~~~~~~dg~~~v~~~~~~-- 225 (369)
T 2hz6_A 151 ELRWNATYFDYAASLPEDDVDYKMSH-FVSNGDGLVVTVDSESGDVL-WIQN-YASPVVAFYVWQREGLRKVMHINVA-- 225 (369)
T ss_dssp SCCCEEEEEEECCBCCCCCTTCCCCE-EEEETSCEEEEECTTTCCEE-EEEE-CSSCEEEEEECTTSSCEEECCEEEE--
T ss_pred CEEEeEecccccCccccCCccccceE-EEECCCCEEEEEECCCCcEE-EEec-CCCceEEEEEecCCceEeccceeec--
Confidence 887666532 2223333321 334 44889999999999987742 2222 3444443 4455666432 122
Q ss_pred CCcEEEEEECCCCc----eeeeecc---------CCcEEEEEeCCCcEEEEEccc
Q psy3710 290 KGTLIRVFDTGSGQ----KLNELRR---------DSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 290 d~~~i~iwd~~~~~----~~~~~~~---------~~~~l~~~~~d~~i~iw~~~~ 331 (424)
++. ++.+|..+|+ .+.++.. .+..++.++.||.++.++...
T Consensus 226 ~~~-l~~ld~~tG~~~~~~~W~~~~~~~~~sp~~~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 226 VET-LRYLTFMSGEVGRITKWKYPFPKETEAKSKLTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp HHH-HHHHHHHHHHHHHHHTSCCCCCCHHHHHHHSEEEECBEECSSCEECCEEEE
T ss_pred ccc-eeeeehhcCCcccceeeeeccCccccccccccceEEEecccCCEEecCccc
Confidence 334 6667766666 5554432 245788889999999998874
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=2.4e-10 Score=109.91 Aligned_cols=225 Identities=14% Similarity=0.186 Sum_probs=144.9
Q ss_pred CeeEEEeecCCCCeEEEee----ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC-----------
Q psy3710 142 KGLCVLCPNSNNSLLAFPG----RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK----------- 206 (424)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------- 206 (424)
..+..++|||||++|+.+. +....|++||+.++ +.+.. ..+......++|+ ||+.|+.++.+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg-~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK-QPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC-SEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC-CCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 3466789999999999733 33357999999986 32221 1111113578899 99999888766
Q ss_pred --CcEEEEEECCCcc----eeeEEec-c---eeeeeecCCCCeEEEEeec---CCeEEEEeCCCCCCCCeeeccCCCCeE
Q psy3710 207 --GTLIRVFDTGSGQ----KLNELRR-G---LCVLCPNSNNSLLAFPGRK---SGHVHLVDLADPERPPLDIAAHEAPLS 273 (424)
Q Consensus 207 --~~~i~iwd~~~~~----~~~~~~~-~---~~~~~~~~~~~~~~~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~v~ 273 (424)
.. |++|++.+.. .+...+. + .....++|+++.++++... .+.|+++|+.++......+..+.....
T Consensus 206 ~~~~-v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 206 DQHK-VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCE-EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCcE-EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 34 8999998764 2333333 1 3567889999999886553 358999999887645555656666665
Q ss_pred EEEEcCCCCEEEEEeC-C---CcEEEEEECCCCce--ee----------eeccCCcEEEEEeCCC---cEEEEEcccccc
Q psy3710 274 CIALNQTGTRLATASY-K---GTLIRVFDTGSGQK--LN----------ELRRDSSYLCVSSDHG---TVHVFSVDEAQK 334 (424)
Q Consensus 274 ~~~~~~~~~~l~~~~~-d---~~~i~iwd~~~~~~--~~----------~~~~~~~~l~~~~~d~---~i~iw~~~~~~~ 334 (424)
.. ++++|..|+..+. + +. |..+++.++.. .. .++++++.|+....++ .|++|++.++.
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~- 361 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR- 361 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE-
T ss_pred EE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe-
Confidence 55 6666665554443 3 46 89999987543 11 4566777776665443 68888887532
Q ss_pred ccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEecc----CcEEEEEec
Q psy3710 335 INKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICAD----GSYYKFMFN 394 (424)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~d----g~v~~~~~~ 394 (424)
...+. .| ..+.+..+.++++++.|+....+ +.++.|++.
T Consensus 362 ~~~l~-------~p--------------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 362 VREVA-------LP--------------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EEEEC-------CS--------------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred eEEee-------cC--------------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 11110 00 01223455677888877766554 788888876
No 232
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.30 E-value=3.9e-09 Score=90.79 Aligned_cols=226 Identities=13% Similarity=-0.000 Sum_probs=143.6
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-ecCCeEEEEecCCceEEEe---eccEEEEeec
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVL---EGLIKVYTFI 126 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~ 126 (424)
........|.++++.++.++.. ++.|..|+. +++. ..+. ....+..+++++++.++++ ++.|.+|+..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~------~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLV------GRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETT------TTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCccCCeEeCCCCEEEEEECC------CCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 3445678899999977776643 689999998 5653 3444 5667899999999987776 3578888864
Q ss_pred CCCceeEEEeeCCC--CCeeEEEeecCCCCeEEEe---ecc-------------CCeEEEEeCCCCCCCCcccccccCCe
Q psy3710 127 QCPQQLHVFETNPN--PKGLCVLCPNSNNSLLAFP---GRK-------------SGHVHLVDLADPERPPLDIAAHEAPL 188 (424)
Q Consensus 127 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~---~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~v 188 (424)
++.......... ...+..+.++++|+++++- |.. .+.|..+|..++ + ...+. .....
T Consensus 116 --g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-~-~~~~~-~~~~p 190 (305)
T 3dr2_A 116 --GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-P-LQRMA-DLDHP 190 (305)
T ss_dssp --SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-C-CEEEE-EESSE
T ss_pred --CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-c-EEEEe-cCCCC
Confidence 332221111111 1123457888999877741 221 256777777654 2 22333 44567
Q ss_pred EEEEEccCCCEEEEEecC------CcEEEEEECCCccee--eEEe----cceeeeeecCCCCeEEEEeecCCeEEEEeCC
Q psy3710 189 SCIALNQTGTRLATASYK------GTLIRVFDTGSGQKL--NELR----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 189 ~~~~~~~~~~~l~~~~~d------~~~i~iwd~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 256 (424)
..++|+|+++.|+.+... +. |.+|++..+... ..+. .....+++++++. +.+ +.. +.|.+|+..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~-i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv-~~~-~gv~~~~~~ 266 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVE-ITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWS-SSG-TGVCVFDSD 266 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCE-EEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEE-CCS-SEEEEECTT
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCE-EEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEE-ecC-CcEEEECCC
Confidence 899999999988777665 67 999998754311 1111 1234577888887 333 333 459999984
Q ss_pred CCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEE
Q psy3710 257 DPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298 (424)
Q Consensus 257 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 298 (424)
. + ....+..+. .+.+++|+|+++.|+.++.++ +..++
T Consensus 267 g-~-~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~--l~~~~ 303 (305)
T 3dr2_A 267 G-Q-LLGHIPTPG-TASNCTFDQAQQRLFITGGPC--LWMLP 303 (305)
T ss_dssp S-C-EEEEEECSS-CCCEEEECTTSCEEEEEETTE--EEEEE
T ss_pred C-C-EEEEEECCC-ceeEEEEeCCCCEEEEEcCCe--EEEEE
Confidence 3 2 233333333 588999999998888888765 44443
No 233
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=6.5e-11 Score=103.63 Aligned_cols=171 Identities=12% Similarity=0.092 Sum_probs=127.5
Q ss_pred CeEEEEecCCceEEEe--eccEEEEeecCCC----------ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEE
Q psy3710 101 PVKGVRLRRDKIVVVL--EGLIKVYTFIQCP----------QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHL 168 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i 168 (424)
++..+++++...++++ ...+.+|+++.-. +...... .+. +..++| ++.+|++ + .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~---lp~-V~~l~f--d~~~L~v-~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE---IPD-VIFVCF--HGDQVLV-S-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE---CTT-EEEEEE--ETTEEEE-E-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee---CCC-eeEEEE--CCCEEEE-E-cCCcEEE
Confidence 5888999988766655 4578889875211 1112222 234 788888 8999998 6 8899999
Q ss_pred EeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCC
Q psy3710 169 VDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSG 248 (424)
Q Consensus 169 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg 248 (424)
||+.+. ........|..++.++.+.+. .++++..||. +.+||+.++.... +...+.+++|+|+| ++ .|..||
T Consensus 111 ~dv~sl-~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~-L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~-vg~~dg 182 (388)
T 1xip_A 111 LDLEEL-SEFRTVTSFEKPVFQLKNVNN--TLVILNSVND-LSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LA-VLLKDR 182 (388)
T ss_dssp EESSST-TCEEEEEECSSCEEEEEECSS--EEEEEETTSE-EEEEETTTCCEEE-EEESEEEEEECSSE--EE-EEETTS
T ss_pred EEchhh-hccCccceeecceeeEEecCC--CEEEEECCCC-EEEEEccCCcccc-ccCCceEEEEcCCc--eE-EEEcCC
Confidence 999876 344456677888988887764 3888999999 9999999877653 56679999999999 33 489999
Q ss_pred eEEEEeCCCCCCC-Ceee------c---cCCCCeEEEEEcCCCCEEEEE
Q psy3710 249 HVHLVDLADPERP-PLDI------A---AHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 249 ~i~i~d~~~~~~~-~~~~------~---~~~~~v~~~~~~~~~~~l~~~ 287 (424)
.+++|+....... ...+ . +|...|.++.|.+++.++++=
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999988765521 2223 2 378899999999999888773
No 234
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.30 E-value=3.1e-07 Score=89.93 Aligned_cols=338 Identities=9% Similarity=0.107 Sum_probs=200.5
Q ss_pred eEEEEECCCCCeeEeecCCeEEEEeCCcCccccc-ccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 13 LLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKER-QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 13 V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
|.++...++|.+.+....+|+..|+..+.+.... ...+...|..+....++...+... ++.+..||..+++
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~--------~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATE--------GAGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEB--------SSCEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEEC--------CCCeEEEeCCCCe
Confidence 8888888888766644445799999766554221 111244566666666666555433 3468999987765
Q ss_pred EEEEEee---------cCCeEEEEecCCce-EEEeeccEEEEeecCCCceeEEEeeCC------CCCeeEEEeecCCCCe
Q psy3710 92 VVICLEF---------NAPVKGVRLRRDKI-VVVLEGLIKVYTFIQCPQQLHVFETNP------NPKGLCVLCPNSNNSL 155 (424)
Q Consensus 92 ~~~~~~~---------~~~v~~~~~~~~~~-~~~~~~~i~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 155 (424)
... +.+ ...|.++...+++. ++++++.|.+|+.. ... ...+.... ....+.++...++|.+
T Consensus 247 ~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~-~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l 323 (795)
T 4a2l_A 247 IKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEG-TDS-FASYSSNPVENGSLSQRSVRSIFMDSQGGM 323 (795)
T ss_dssp EEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETT-TTE-EEEECCCTTSTTSCSSSCEEEEEECTTSCE
T ss_pred EEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCC-CCe-EEEEecCCCCCCCCCCCcEEEEEEeCCcCE
Confidence 433 322 24689999887774 55566678889864 333 33332111 1234778888888876
Q ss_pred EEEeeccCCeEEEEeCCCCCCCCcccc-------cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe---
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPPLDIA-------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR--- 225 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--- 225 (424)
.+ |+.++-|..|+.... ....+. -....|.++...++|. |..|+.++. |..||..+++...-..
T Consensus 324 Wi--gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~G-l~~~~~~~~~~~~~~~~~~ 397 (795)
T 4a2l_A 324 WL--GTYFGGLNYYHPIRN--RFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGG-LNLYNPITQRFTSYTLQED 397 (795)
T ss_dssp EE--EESSSCEEEECGGGG--SSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSC-EEEECTTTCCEEEECCC--
T ss_pred EE--EECCCCeEEeCCCcc--cceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCC-eEEEcCCCCcEEEEecCCC
Confidence 65 777788899987653 111111 1245699999888875 555777766 9999987765432211
Q ss_pred --------cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-----cCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy3710 226 --------RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-----AHEAPLSCIALNQTGTRLATASYKGT 292 (424)
Q Consensus 226 --------~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~ 292 (424)
..+..++..+++..+.+ |+.++-|..||..+++. ..+. .....|.++...++|++.+.. .+|
T Consensus 398 ~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~~Gl~~~d~~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G- 472 (795)
T 4a2l_A 398 ESARGIGSNNIKAVYVDEKKSLVYI-GTHAGGLSILHRNSGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA- 472 (795)
T ss_dssp ----CCSCSCEEEEEEETTTTEEEE-EETTTEEEEEETTTCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-
T ss_pred CcccCCCCccEEEEEEcCCCCEEEE-EeCcCceeEEeCCCCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-
Confidence 12445555666653444 77878899999887542 1111 234679999999888755544 444
Q ss_pred EEEEEECCCCceeee----------------e--ccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCC
Q psy3710 293 LIRVFDTGSGQKLNE----------------L--RRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSS 354 (424)
Q Consensus 293 ~i~iwd~~~~~~~~~----------------~--~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (424)
+.+||..+++.... + .++|.+.+ |+. +-|..|+..+++. ........
T Consensus 473 -l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~~~~---------- 537 (795)
T 4a2l_A 473 -LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASILPV---------- 537 (795)
T ss_dssp -EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCCSCS----------
T ss_pred -eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecCCCC----------
Confidence 89999877543221 1 13344433 334 4577888766442 11100000
Q ss_pred ceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 355 WSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
...+...+..+...++|+..+ ++.. -+..|+..
T Consensus 538 -----~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~ 570 (795)
T 4a2l_A 538 -----SNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEK 570 (795)
T ss_dssp -----CGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred -----CCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCC
Confidence 001223466777777877444 4444 56666643
No 235
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.28 E-value=2.1e-07 Score=91.10 Aligned_cols=273 Identities=9% Similarity=0.090 Sum_probs=171.4
Q ss_pred CCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccc-------cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQ-------DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
...|.++...++|.+.+....+|+.+|+..+.+..... ......|.++....++...+... +-|
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~---------~Gl 284 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF---------NDL 284 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES---------SCE
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC---------Chh
Confidence 46788998888887666555668999998765432111 11245677777776666554332 368
Q ss_pred EEEECCCCcEEEEEe--------ecCCeEEEEecCCce-EEEe-eccEEEEeecCCCceeEEEeeCC-----CCCeeEEE
Q psy3710 83 MIWDDLKKQVVICLE--------FNAPVKGVRLRRDKI-VVVL-EGLIKVYTFIQCPQQLHVFETNP-----NPKGLCVL 147 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~-~~~~-~~~i~v~~~~~~~~~~~~~~~~~-----~~~~~~~~ 147 (424)
.+||..+++...... ....|.++...+++. .+++ ++.|..|+.. ... ...+.... ....+.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~l~~~~V~~i 362 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPI-RNR-FKNIRNIPYKNSLSDNVVSCI 362 (795)
T ss_dssp EEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGG-GGS-SEEECCCTTSSSCSCSSEEEE
T ss_pred heEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCC-ccc-ceEEcCCCCCCCCCCCeeEEE
Confidence 999987766443221 125689999988874 5555 5789999864 222 22222111 12347788
Q ss_pred eecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc---------cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCc
Q psy3710 148 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA---------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 218 (424)
Q Consensus 148 ~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 218 (424)
...+++.+.+ |..++-|..|+..++ ....+. .....|.++...++|+.|..|+.++. |..+|..++
T Consensus 363 ~~d~~g~lWi--Gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G-l~~~d~~~~ 437 (795)
T 4a2l_A 363 VEDKDKNLWI--GTNDGGLNLYNPITQ--RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG-LSILHRNSG 437 (795)
T ss_dssp EECTTSCEEE--EESSSCEEEECTTTC--CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTE-EEEEETTTC
T ss_pred EECCCCCEEE--EECCCCeEEEcCCCC--cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc-eeEEeCCCC
Confidence 8888887655 788888999998764 222221 12467899998888875777777777 999998877
Q ss_pred ceeeEEe-------cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeee-----ccCCCCeEEEEEcCCCCEEEE
Q psy3710 219 QKLNELR-------RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI-----AAHEAPLSCIALNQTGTRLAT 286 (424)
Q Consensus 219 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~ 286 (424)
+...-.. ..+..+...+++...+ |+. +.+.+||..+++...... ......|.++...++|++.+.
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi--gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWL--GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEE--EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEE--Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEE
Confidence 5432211 1245555566555444 444 568889987643111100 112467899999998876655
Q ss_pred EeCCCcEEEEEECCCCce
Q psy3710 287 ASYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 287 ~~~d~~~i~iwd~~~~~~ 304 (424)
.. . . +..||..+++.
T Consensus 515 t~-~-G-l~~~~~~~~~~ 529 (795)
T 4a2l_A 515 GE-E-G-LSVFKQEGLDI 529 (795)
T ss_dssp ES-S-C-EEEEEEETTEE
T ss_pred eC-C-c-eEEEeCCCCeE
Confidence 44 4 4 88998876554
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.22 E-value=4.3e-10 Score=98.00 Aligned_cols=285 Identities=9% Similarity=0.068 Sum_probs=165.7
Q ss_pred EEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEE
Q psy3710 15 YAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVI 94 (424)
Q Consensus 15 ~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 94 (424)
++....+|.+.+.+.+++|..|| .+++.......+...+..+....++... +.+ ++ +..+|. +++.+.
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t--------~~-l~~~d~-~g~~~~ 91 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIY-FGS--------DK-VYAINP-DGTEKW 91 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEEC-CSS--------CE-EEEECC-CGGGGG
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEE-Eec--------Cc-EEEECC-CCcEEE
Confidence 34555666544444455599999 7777654444433344444444444432 222 34 888885 665544
Q ss_pred EEeecC-CeEEEEecCCceEEEe-eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCC
Q psy3710 95 CLEFNA-PVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA 172 (424)
Q Consensus 95 ~~~~~~-~v~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~ 172 (424)
.+.... ......+..+..++++ ++.+..+|.. ++........... +.++...+++..+ + ++.++.|..+|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~--g~~~~~~~~~~~~--~~~~~~~~~g~l~-v-gt~~~~l~~~d~~ 165 (330)
T 3hxj_A 92 RFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD--GTEKWRFKTKKAI--YATPIVSEDGTIY-V-GSNDNYLYAINPD 165 (330)
T ss_dssp GSCC-----CCEEEETTEEEEECTTSEEEEECTT--SCEEEEEECSSCC--CSCCEECTTSCEE-E-ECTTSEEEEECTT
T ss_pred EEECCCCcccCceEECCEEEEEecCCEEEEEcCC--CCEEEEEcCCCce--eeeeEEcCCCEEE-E-EcCCCEEEEECCC
Confidence 443222 2222333344455555 7889999874 4555554433322 3334455566644 4 7788999999988
Q ss_pred CCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCe
Q psy3710 173 DPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGH 249 (424)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~ 249 (424)
+ .....+......+.++...+++...+ ++ +. +..+| .+++....+..+ +..+...+++. +.+ ++.++.
T Consensus 166 -g-~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~-l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v-~t~~~g 236 (330)
T 3hxj_A 166 -G-TEKWRFKTNDAITSAASIGKDGTIYF-GS--DK-VYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYV-TSLDGH 236 (330)
T ss_dssp -S-CEEEEEECSSCCCSCCEECTTCCEEE-ES--SS-EEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEE-EETTTE
T ss_pred -C-CEeEEEecCCCceeeeEEcCCCEEEE-Ee--CE-EEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEE-EcCCCe
Confidence 4 44444444455677777777776554 44 66 99999 777776665533 44455555553 333 777888
Q ss_pred EEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc-----------CCcEEEEE
Q psy3710 250 VHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR-----------DSSYLCVS 318 (424)
Q Consensus 250 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~-----------~~~~l~~~ 318 (424)
+..+|.. ++ ....+......+..+.+.+++ .|..++.++. |..+|. +++.+..+.. .+..|..+
T Consensus 237 l~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~gg-l~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 237 LYAINPD-GT-EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGH-LYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFG 311 (330)
T ss_dssp EEEECTT-SC-EEEEEECSSCCCSCCEECTTS-CEEEECTTCE-EEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEE
T ss_pred EEEECCC-CC-EeEEeeCCCCccccceEcCCC-eEEEecCCCC-EEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEE
Confidence 9988743 22 223333333334455666565 5667788878 999996 6776665431 23346667
Q ss_pred eCCCcEEEEEccc
Q psy3710 319 SDHGTVHVFSVDE 331 (424)
Q Consensus 319 ~~d~~i~iw~~~~ 331 (424)
+.+|.+++...+.
T Consensus 312 t~~G~~~~~~~~~ 324 (330)
T 3hxj_A 312 TRNGKFYALFNLE 324 (330)
T ss_dssp CTTSCEEEEEC--
T ss_pred cCCCeEEEEeccc
Confidence 8888888877655
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.22 E-value=2.4e-08 Score=84.08 Aligned_cols=246 Identities=9% Similarity=-0.018 Sum_probs=150.4
Q ss_pred CCeeEeecCCeEEEEeCCcCcccc-----cccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEE
Q psy3710 22 QGCFACGMEDGFRIYNCDPLKEKE-----RQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL 96 (424)
Q Consensus 22 g~~la~g~~~~i~iw~~~~~~~~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~ 96 (424)
|++|..+..+.|+.++++...... ....+......+++.++++.+..+... .+.|..++...+.....+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------EPSIGRASLHGGEPTTII 74 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT------TTEEEEEESSSCCCEEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC------CCEEEEEecCCCCcEEEE
Confidence 345666655558888877554311 111123346678899888888777654 589999998765543333
Q ss_pred ee-cCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc--CCeEEEE
Q psy3710 97 EF-NAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK--SGHVHLV 169 (424)
Q Consensus 97 ~~-~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--dg~i~i~ 169 (424)
.. ......+++.++ +.+.++ .+.|.++++. +.....+... .......++++|++..|.++... .+.|..+
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~--g~~~~~~~~~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD--GTQRRVLFDT-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEECS-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC--CCCEEEEEEC-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 22 257889999985 444444 5689999875 2222222211 11235678899976666652333 4788888
Q ss_pred eCCCCCCCCcccc-cccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEecc--eeeeeecCCCCeEEEEee
Q psy3710 170 DLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELRRG--LCVLCPNSNNSLLAFPGR 245 (424)
Q Consensus 170 d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 245 (424)
+++.. ....+. ..-.....++++|+++.|+.+.. .+. |..+|.........+... ...++ .++..++++..
T Consensus 152 ~~dg~--~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~~~~P~gi~--~d~~~lyva~~ 226 (267)
T 1npe_A 152 HMDGT--NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEGLQYPFAVT--SYGKNLYYTDW 226 (267)
T ss_dssp ETTSC--CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEECCCSEEEEE--EETTEEEEEET
T ss_pred ecCCC--CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecCCCCceEEE--EeCCEEEEEEC
Confidence 88753 222221 22345789999998777665554 466 999999765433333322 22333 34677877677
Q ss_pred cCCeEEEEeCCCCCCCCeeeccC-CCCeEEEEEcCCCC
Q psy3710 246 KSGHVHLVDLADPERPPLDIAAH-EAPLSCIALNQTGT 282 (424)
Q Consensus 246 ~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 282 (424)
..+.|..+|..+++. ...+... ......+++.|++.
T Consensus 227 ~~~~v~~~d~~~g~~-~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 227 KTNSVIAMDLAISKE-MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEETTTTEE-EEEECCSSCCCCCCEEEECSCC
T ss_pred CCCeEEEEeCCCCCc-eEEEccccccccceeeecCccC
Confidence 789999999987653 2333222 22467788887754
No 238
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=1.5e-09 Score=95.09 Aligned_cols=259 Identities=12% Similarity=0.020 Sum_probs=158.3
Q ss_pred eeEEEeecCCCCeEEEeec--cCCeEEEEeCCCCCCCCcc-------cccccCCeEEEEEccCCCEEEEEec-----CCc
Q psy3710 143 GLCVLCPNSNNSLLAFPGR--KSGHVHLVDLADPERPPLD-------IAAHEAPLSCIALNQTGTRLATASY-----KGT 208 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~--~dg~i~i~d~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~ 208 (424)
....++++++|+.+++ .. .++.++||.+.++ + +.. ...|-..+..++++++|+++++-.. +..
T Consensus 18 ~p~~va~~~~g~~~v~-~~~~~~~~~~l~~~~~g-~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 18 APGNITLTPDGRLFLS-LHQFYQPEMQVAELTQD-G-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp CEEEEEECTTSCEEEE-ECGGGCCSCSEEEEETT-E-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CcceEEECCCCCEEEE-eCCCCCCceEEEEECCC-C-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 3667889999988776 32 2342445544332 2 121 1234567999999999876665544 567
Q ss_pred EEEEEECCCcceeeEEecc---------eeeeeecCCCCeEEEEee---cCCeEEEEeCCCCCCCCeeeccCCCCeE-EE
Q psy3710 209 LIRVFDTGSGQKLNELRRG---------LCVLCPNSNNSLLAFPGR---KSGHVHLVDLADPERPPLDIAAHEAPLS-CI 275 (424)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~ 275 (424)
|.+||+.+++.+..+..+ ...+++++++..++++.. .++.|.+||+.+++ ....+..|..... ..
T Consensus 95 -i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 95 -LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDI 172 (343)
T ss_dssp -EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSC
T ss_pred -EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCccccccc
Confidence 999999999877666532 356788887777777666 78899999998765 2333333322110 13
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEECCCCceeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCc
Q psy3710 276 ALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSW 355 (424)
Q Consensus 276 ~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (424)
.+.++|..+.+.+.++. ++.|.. +..--.++|+++.|+.+..++. ++|.+........ . ........
T Consensus 173 ~~~~~g~~~~~~~~~g~-~~~~~~--~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~-~-~~~~~~~~------- 239 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGT-VIRPHL--GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNL-Q-LTDAELGS------- 239 (343)
T ss_dssp CCEETTEECBEECTTSC-EECCCC--CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCT-T-CCHHHHHT-------
T ss_pred ceeECCEEEEeccCCCc-eeceec--ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCC-C-CChhhhhc-------
Confidence 45567888888888998 887753 2233568899998888877663 4555543111000 0 00000000
Q ss_pred eeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeeee------ehhhheecCCCceeeEEE
Q psy3710 356 SFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDV------YIQFLEMTNDSNLLSCIE 421 (424)
Q Consensus 356 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~~------~~~~~~~~~d~~~l~~~~ 421 (424)
......+.+....++++++|+.+++...++.|.+|+.. +++..... +...+.+.++|+++++..
T Consensus 240 -~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~-~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 240 -KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA-DRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp -TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT-TTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred -ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC-CCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 00001112234468999999988888889999999973 34432211 223566788988877653
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.21 E-value=1.4e-08 Score=96.88 Aligned_cols=262 Identities=13% Similarity=0.139 Sum_probs=163.8
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCC------------eEEEEecCCceEEEe-eccEEEEeecCCC
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP------------VKGVRLRRDKIVVVL-EGLIKVYTFIQCP 129 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------v~~~~~~~~~~~~~~-~~~i~v~~~~~~~ 129 (424)
+..+++.+ .++.|.-+|..+|+.+.++..... -..+.+..+..++.+ ++.|..+|.+ ++
T Consensus 66 ~g~vyv~~-------~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~-tG 137 (668)
T 1kv9_A 66 DGVIYTSM-------SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAK-TG 137 (668)
T ss_dssp TTEEEEEE-------GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETT-TC
T ss_pred CCEEEEEC-------CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECC-CC
Confidence 45555555 368999999999999998863221 122344444444444 8999999986 78
Q ss_pred ceeEEEeeCCCCCeeEEEeecC--CCCeEEEeecc------CCeEEEEeCCCCCCCCccccc------------------
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNS--NNSLLAFPGRK------SGHVHLVDLADPERPPLDIAA------------------ 183 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~------dg~i~i~d~~~~~~~~~~~~~------------------ 183 (424)
+.+..+........ ..+..+| .+..+++ +.. +|.|..+|..++ +.+-.+..
T Consensus 138 ~~~W~~~~~~~~~~-~~~~~~P~v~~~~v~v-g~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~ 214 (668)
T 1kv9_A 138 KAIWSQQTTDPAKP-YSITGAPRVVKGKVII-GNGGAEYGVRGFVSAYDADTG-KLAWRFYTVPGDPALPYEHPELREAA 214 (668)
T ss_dssp CEEEEEECSCTTSS-CBCCSCCEEETTEEEE-CCBCTTTCCBCEEEEEETTTC-CEEEEEESSCCCTTSCCSSHHHHHHH
T ss_pred CEeeeeccCCCCCc-ceecCCCEEECCEEEE-eCCCCCcCCCCEEEEEECCCC-cEEEEecccCCCCCcccccccccccc
Confidence 88877765321100 0000011 1334444 432 589999999887 33332221
Q ss_pred -------------ccCCeEEEEEccCCCEEEEEecCC-------------------cEEEEEECCCcceeeEEecc----
Q psy3710 184 -------------HEAPLSCIALNQTGTRLATASYKG-------------------TLIRVFDTGSGQKLNELRRG---- 227 (424)
Q Consensus 184 -------------~~~~v~~~~~~~~~~~l~~~~~d~-------------------~~i~iwd~~~~~~~~~~~~~---- 227 (424)
+......+++.|+...++.++.++ . |..+|.++++.+-.++..
T Consensus 215 ~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~-v~AlD~~tG~~~W~~~~~~~~~ 293 (668)
T 1kv9_A 215 KTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS-ILAIRPDTGKLAWHYQVTPGDS 293 (668)
T ss_dssp TTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE-EEEECTTTCCEEEEEESSTTCC
T ss_pred ccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee-EEEEcCCCCceeeEeecCCCcc
Confidence 011122468888888888877654 5 899999999998877642
Q ss_pred --------eeeeeecCCCC--eEEEEeecCCeEEEEeCCCCCCCCee----------eccC-CCC---------------
Q psy3710 228 --------LCVLCPNSNNS--LLAFPGRKSGHVHLVDLADPERPPLD----------IAAH-EAP--------------- 271 (424)
Q Consensus 228 --------~~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~----------~~~~-~~~--------------- 271 (424)
.....+..++. .+++.++.+|.++++|..+++..... +... ..+
T Consensus 294 wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 373 (668)
T 1kv9_A 294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVM 373 (668)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEE
T ss_pred ccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEE
Confidence 11111122443 35666899999999999988742110 0000 000
Q ss_pred ---------eEEEEEcCCCCEEEEEe------------------------------------CCCcEEEEEECCCCceee
Q psy3710 272 ---------LSCIALNQTGTRLATAS------------------------------------YKGTLIRVFDTGSGQKLN 306 (424)
Q Consensus 272 ---------v~~~~~~~~~~~l~~~~------------------------------------~d~~~i~iwd~~~~~~~~ 306 (424)
-..++++|+...++... .++. |..||+.+|+.+.
T Consensus 374 ~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~-l~A~D~~tG~~~W 452 (668)
T 1kv9_A 374 WPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGA-LLAWDPVKQKAAW 452 (668)
T ss_dssp SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEE-EEEEETTTTEEEE
T ss_pred CCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccce-EEEEeCCCCcEEE
Confidence 01267888766655421 2377 9999999999887
Q ss_pred eec-----------cCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 307 ELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 307 ~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
++. ..+.+++.++.|+.++.||..+++.+-+
T Consensus 453 ~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~ 494 (668)
T 1kv9_A 453 KVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ 494 (668)
T ss_dssp EEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheE
Confidence 653 3567888899999999999999887654
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=9.9e-12 Score=109.90 Aligned_cols=173 Identities=14% Similarity=0.179 Sum_probs=103.4
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceee-
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCV- 230 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~- 230 (424)
++..+++ ++.||.|+.||..++ +.+..+.. +.+.+..+..++..+++++.|+. |+.||..+++.+..++.+...
T Consensus 8 ~~~~v~~-gs~dg~v~a~d~~tG-~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~-l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFV-STLDGSLHAVSKRTG-SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGS-LYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEE-EETTSEEEEEETTTC-CEEEEEEC--CCSCCCC-----CCEEECTTTCC-EEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEE-EcCCCEEEEEECCCC-CEEEEecC--CCceecceEcCCCEEEEeCCCCE-EEEEECCCCceeeeeeccCccc
Confidence 4677777 899999999999987 55555544 45555556667778888889999 999999999877665433110
Q ss_pred eeecC---CCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee
Q psy3710 231 LCPNS---NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE 307 (424)
Q Consensus 231 ~~~~~---~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~ 307 (424)
...+| .+. .+++++.++.++.||..+++... .+..+. ...++|++..+++++.|+. |+.||.++|+.+++
T Consensus 83 ~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w-~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 83 VQASPCRSSDG-ILYMGKKQDIWYVIDLLTGEKQQ-TLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTRELRWN 155 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEE-EECCCSSSSSCCCE
T ss_pred cccCceEecCC-EEEEEeCCCEEEEEECCCCcEEE-EecCCC----cccccccCCEEEEEecCCE-EEEEECCCCCEEEe
Confidence 01111 333 34558889999999999887532 222222 2345678889999999999 99999999998776
Q ss_pred ec--------cCC-----cEEEEEeCCCcEEEEEcccccccc
Q psy3710 308 LR--------RDS-----SYLCVSSDHGTVHVFSVDEAQKIN 336 (424)
Q Consensus 308 ~~--------~~~-----~~l~~~~~d~~i~iw~~~~~~~~~ 336 (424)
+. .++ ..+++++.||.|+.||..+|+.+-
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 156 ATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp EEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred EecccccCccccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 53 122 567778899999999999987643
No 241
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=1.5e-06 Score=84.92 Aligned_cols=271 Identities=14% Similarity=0.154 Sum_probs=161.3
Q ss_pred CceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccc-------cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQ-------DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
..|.++...++|.+.+... +|+.+||..+.+..... ......|.++....++...+... .+-|.
T Consensus 211 ~~i~~i~~d~~g~lwigt~-~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~--------~~Gl~ 281 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTS-KGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATE--------LNGIM 281 (781)
T ss_dssp SSEEEEEECTTCCEEEEET-TEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEES--------SSCEE
T ss_pred CceeEEEEcCCCCEEEEeC-CcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeC--------CCCeE
Confidence 5699999998887666544 49999997665442211 12245576776666666544332 25788
Q ss_pred EEECCCCcEEEEEe---------------ecCCeEEEEecCCc-eEEEe-eccEEEEeecCCCceeEEEee--------C
Q psy3710 84 IWDDLKKQVVICLE---------------FNAPVKGVRLRRDK-IVVVL-EGLIKVYTFIQCPQQLHVFET--------N 138 (424)
Q Consensus 84 iwd~~~~~~~~~~~---------------~~~~v~~~~~~~~~-~~~~~-~~~i~v~~~~~~~~~~~~~~~--------~ 138 (424)
++|..+++...... ....|.++...+++ ..+++ ++.|..++.. .. ....+.. .
T Consensus 282 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~-~~-~~~~~~~~~~~~~~~~ 359 (781)
T 3v9f_A 282 ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNA-PP-TFHTWSYSPTQMNESS 359 (781)
T ss_dssp EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSS-CC-SCEEEC----CCCSSC
T ss_pred EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCC-CC-cceeeccCccccccCC
Confidence 89987665432111 13468899888776 55666 7789999874 22 2222211 1
Q ss_pred CCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccc----ccccCCeEEEEEccCCCEEEEEecCCcEEEEEE
Q psy3710 139 PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI----AAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd 214 (424)
.....+.++...+++.+.+ |+.++-|..||..+. ....+ ......|.++...++|.+ ..|+.++. +..+|
T Consensus 360 l~~~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~G-l~~~~ 433 (781)
T 3v9f_A 360 LSNKVVSSVCDDGQGKLWI--GTDGGGINVFENGKR--VAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGN-ISYYN 433 (781)
T ss_dssp CSSSCEEEEEECTTSCEEE--EEBSSCEEEEETTEE--EEECC-----CCCSBEEEEEECTTSCE-EEEETTEE-EEEEC
T ss_pred CCCcceEEEEEcCCCCEEE--EeCCCcEEEEECCCC--eEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCC-EEEEc
Confidence 1123477888887777654 676777888987653 11111 123467899988877764 44666666 99999
Q ss_pred CCCcceeeEEe-----cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec----cCCCCeEEEEEcCCCCEEE
Q psy3710 215 TGSGQKLNELR-----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA----AHEAPLSCIALNQTGTRLA 285 (424)
Q Consensus 215 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~ 285 (424)
..+++...-.. ..+..+...+++. +.+ |+. +-|..||..+.+....... .....|.++...++|++.+
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 510 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKK-IWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI 510 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSE-EEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCC-EEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE
Confidence 87765432211 1244455555544 333 555 6789999876542211110 1146799999999887555
Q ss_pred EEeCCCcEEEEEECCCCc
Q psy3710 286 TASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 286 ~~~~d~~~i~iwd~~~~~ 303 (424)
|+.++. +..+|..+++
T Consensus 511 -gt~~~G-l~~~~~~~~~ 526 (781)
T 3v9f_A 511 -GTFGGG-VGIYTPDMQL 526 (781)
T ss_dssp -EESSSC-EEEECTTCCE
T ss_pred -EEcCCC-EEEEeCCCCe
Confidence 444334 7888887654
No 242
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.14 E-value=2.7e-07 Score=86.30 Aligned_cols=263 Identities=13% Similarity=0.123 Sum_probs=160.0
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCe----------EEEEecCCceEEEe-eccEEEEeecCCCce
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV----------KGVRLRRDKIVVVL-EGLIKVYTFIQCPQQ 131 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~-~~~i~v~~~~~~~~~ 131 (424)
+..+++.+. ++.|.-+|.++|+.+.++...... ..+++..+..++.+ ++.+..+|.+ +++.
T Consensus 68 ~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~-TG~~ 139 (582)
T 1flg_A 68 DGVIYVTAS-------YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKN-TGKV 139 (582)
T ss_dssp TTEEEEEET-------TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESS-SCCE
T ss_pred CCEEEEEcC-------CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECC-CCCE
Confidence 445555552 245999999999999988743221 23344444455555 8899999986 7877
Q ss_pred eEEEeeCCCC-----CeeEEEeec-CCCC-eEEEeec------cCCeEEEEeCCCCCCCCccccccc-------------
Q psy3710 132 LHVFETNPNP-----KGLCVLCPN-SNNS-LLAFPGR------KSGHVHLVDLADPERPPLDIAAHE------------- 185 (424)
Q Consensus 132 ~~~~~~~~~~-----~~~~~~~~~-~~~~-~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~------------- 185 (424)
+......... .....+.-. .+++ .+++ +. .+|.|.-+|..++ +.+-......
T Consensus 140 ~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG-~~~W~~~~~~~~~~p~~~~~~~~ 217 (582)
T 1flg_A 140 VWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTG-EEIWMRPFVEGHMGRLNGKDSTV 217 (582)
T ss_dssp EEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTC-CEEEEEESSTTCEEEETTEEEEE
T ss_pred EeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCC-CEEeecCCCccccccccCccccc
Confidence 7766543310 001111111 1233 4544 54 3789999999886 3222211100
Q ss_pred ----------------------------CCeEEEEEccCCCEEEEEec--------------------C----CcEEEEE
Q psy3710 186 ----------------------------APLSCIALNQTGTRLATASY--------------------K----GTLIRVF 213 (424)
Q Consensus 186 ----------------------------~~v~~~~~~~~~~~l~~~~~--------------------d----~~~i~iw 213 (424)
..-..+++.|+...++.+.. | +. |..+
T Consensus 218 ~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~-v~Al 296 (582)
T 1flg_A 218 TGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSG-QVGV 296 (582)
T ss_dssp SSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSE-EEEE
T ss_pred ccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccce-EEEE
Confidence 00023566677677776653 2 57 9999
Q ss_pred ECCCcceeeEEecc---------e-eeeeec---CCCC--eEEEEeecCCeEEEEeCCCCCCCCeeeccC----------
Q psy3710 214 DTGSGQKLNELRRG---------L-CVLCPN---SNNS--LLAFPGRKSGHVHLVDLADPERPPLDIAAH---------- 268 (424)
Q Consensus 214 d~~~~~~~~~~~~~---------~-~~~~~~---~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~---------- 268 (424)
|.++++.+-.++.. . ..+... .+++ .+++.++.+|.++++|..+++.....-...
T Consensus 297 D~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 376 (582)
T 1flg_A 297 DPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDL 376 (582)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECT
T ss_pred eCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccc
Confidence 99999998877532 0 111122 3454 466678999999999998876321110000
Q ss_pred --CCC--------------------------------eEEEEEcCCCCEEEEEe--------------------------
Q psy3710 269 --EAP--------------------------------LSCIALNQTGTRLATAS-------------------------- 288 (424)
Q Consensus 269 --~~~--------------------------------v~~~~~~~~~~~l~~~~-------------------------- 288 (424)
..+ -..++++|+...+++..
T Consensus 377 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 456 (582)
T 1flg_A 377 KTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFR 456 (582)
T ss_dssp TTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecccee
Confidence 000 01356777655555432
Q ss_pred -------CCCcEEEEEECCCCceeeeec-----------cCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 289 -------YKGTLIRVFDTGSGQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 289 -------~d~~~i~iwd~~~~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
.+|. |..||+.+|+.+.++. ..+.+++.++.|+.++.||.++|+.+-+
T Consensus 457 ~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 457 IKRMYDDHVGS-LRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp EEESCSSCSEE-EEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ecCCCCCCcce-EEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 2577 9999999999887653 2456788899999999999999987644
No 243
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.13 E-value=2.2e-07 Score=86.79 Aligned_cols=261 Identities=11% Similarity=0.050 Sum_probs=160.8
Q ss_pred CceEEEEeCCcCCCcC-CCeEEEEEC-CCCcEEEEEeecCC------------eEEEEec--CCc----eEEEe-eccEE
Q psy3710 63 CNYLALVGGGTHPKYP-NNRVMIWDD-LKKQVVICLEFNAP------------VKGVRLR--RDK----IVVVL-EGLIK 121 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~-d~~i~iwd~-~~~~~~~~~~~~~~------------v~~~~~~--~~~----~~~~~-~~~i~ 121 (424)
+..+++.+ . ++.|.-+|. .+|+.+.++..... ...+++. .+. .++.+ ++.+.
T Consensus 62 ~g~vyv~~-------~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~ 134 (599)
T 1w6s_A 62 DGKMYIHT-------SFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVA 134 (599)
T ss_dssp TTEEEEEC-------STTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEE
T ss_pred CCEEEEEe-------CCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEE
Confidence 45565555 3 588999999 99999998874321 1235553 333 44444 88999
Q ss_pred EEeecCCCceeEEEeeCCCC--CeeE-EEeecCCCCeEEEeec------cCCeEEEEeCCCCCCCCccccccc-------
Q psy3710 122 VYTFIQCPQQLHVFETNPNP--KGLC-VLCPNSNNSLLAFPGR------KSGHVHLVDLADPERPPLDIAAHE------- 185 (424)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~------- 185 (424)
.+|.+ +++.+......... ..+. ..... ++ .+++ ++ .+|.|+-+|..++ +.+-.+....
T Consensus 135 AlDa~-TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~v-g~~g~e~g~~g~v~A~D~~TG-~~~W~~~~~~~~~~~~~ 209 (599)
T 1w6s_A 135 ALNAE-TGETVWKVENSDIKVGSTLTIAPYVV-KD-KVII-GSSGAELGVRGYLTAYDVKTG-EQVWRAYATGPDKDLLL 209 (599)
T ss_dssp EEETT-TCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEE-CCBCGGGTCCCEEEEEETTTC-CEEEEEESSSCHHHHTB
T ss_pred EEECC-CCCEEEeecCCCCCccceeecCCEEE-CC-EEEE-EecccccCCCCeEEEEECCCC-cEEEEEcCCCCcccccc
Confidence 99986 77777766543210 0010 00111 34 4444 44 3789999999987 3322221110
Q ss_pred ------------------------------CCe-EEEEEccCCCEEEEEecC----------------CcEEEEEECCCc
Q psy3710 186 ------------------------------APL-SCIALNQTGTRLATASYK----------------GTLIRVFDTGSG 218 (424)
Q Consensus 186 ------------------------------~~v-~~~~~~~~~~~l~~~~~d----------------~~~i~iwd~~~~ 218 (424)
..+ ..+++.++...++.+..+ +. |..+|.+++
T Consensus 210 ~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~s-v~Ald~~TG 288 (599)
T 1w6s_A 210 ASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMT-IFGRDADTG 288 (599)
T ss_dssp CTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSE-EEEEETTTC
T ss_pred ccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccce-EEEEeCCCC
Confidence 001 134566777777777655 36 999999999
Q ss_pred ceeeEEecce----------eeeeec---CCCC--eEEEEeecCCeEEEEeCCCCCCCCeeecc------------CCCC
Q psy3710 219 QKLNELRRGL----------CVLCPN---SNNS--LLAFPGRKSGHVHLVDLADPERPPLDIAA------------HEAP 271 (424)
Q Consensus 219 ~~~~~~~~~~----------~~~~~~---~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~ 271 (424)
+.+-.++... ..+.+. .+++ .+++.++.+|.++++|.++++.....-.. ...+
T Consensus 289 ~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p 368 (599)
T 1w6s_A 289 EAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQP 368 (599)
T ss_dssp CEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCE
T ss_pred ceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCce
Confidence 9987776431 111121 3453 56666889999999999987632211000 0011
Q ss_pred e--------------------------EEEEEcCCCCEEEEEe-------------------------------------
Q psy3710 272 L--------------------------SCIALNQTGTRLATAS------------------------------------- 288 (424)
Q Consensus 272 v--------------------------~~~~~~~~~~~l~~~~------------------------------------- 288 (424)
+ ..++++|+..++++..
T Consensus 369 ~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~ 448 (599)
T 1w6s_A 369 VRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQN 448 (599)
T ss_dssp EECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTT
T ss_pred eeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCccc
Confidence 1 2456777666554421
Q ss_pred --CCCcEEEEEECCCCceeeeec-----------cCCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 289 --YKGTLIRVFDTGSGQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 289 --~d~~~i~iwd~~~~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
..|. |..||+.+|+.+.+.. ..+.+++.++.|+.++.||.++|+.+-+
T Consensus 449 ~~~~G~-l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 449 YEGLGQ-IKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp TBCCEE-EEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCcCe-EEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 3467 9999999999888753 1466778899999999999999987643
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.13 E-value=8.1e-08 Score=89.68 Aligned_cols=262 Identities=12% Similarity=0.056 Sum_probs=160.6
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEEC-CCCcEEEEEeecCC------------eEEEEecCCceEEEe-eccEEEEeecCC
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDD-LKKQVVICLEFNAP------------VKGVRLRRDKIVVVL-EGLIKVYTFIQC 128 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~-~~~~~~~~~~~~~~------------v~~~~~~~~~~~~~~-~~~i~v~~~~~~ 128 (424)
+..+++.+. .++.|.-+|. ++|+.+.++..... -..+.+..+..++.+ ++.+..+|.+ +
T Consensus 62 ~g~vyv~~~------~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~-t 134 (571)
T 2ad6_A 62 GDMMYVHSA------FPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAK-T 134 (571)
T ss_dssp TTEEEEECS------TTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETT-T
T ss_pred CCEEEEEeC------CCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECC-C
Confidence 455555552 1588999999 99999988874321 112344444444554 7899999986 7
Q ss_pred CceeEEEeeCCCC--CeeE-EEeecCCCCeEEEeecc------CCeEEEEeCCCCCCCCccccccc--------------
Q psy3710 129 PQQLHVFETNPNP--KGLC-VLCPNSNNSLLAFPGRK------SGHVHLVDLADPERPPLDIAAHE-------------- 185 (424)
Q Consensus 129 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~l~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~-------------- 185 (424)
++.+......... ..+. ..... ++ .+++ +.. ++.|..+|..++ +.+-.+....
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~v-g~~~~~~~~~g~v~a~D~~tG-~~~W~~~~~~~~~~~~~~p~~~~~ 210 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLM-GCSGAELGVRGAVNAFDLKTG-ELKWRAFATGSDDSVRLAKDFNSA 210 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEE-ECBCGGGTCCCEEEEEETTTC-CEEEEEESSSCHHHHTBCTTTTTT
T ss_pred CCEEEEecCCCCCccceeccCCEEE-CC-EEEE-EecCCccCCCCEEEEEECCCC-cEEEEEccCCCccccccCcccccc
Confidence 7777766543210 0110 00011 34 4444 443 789999999987 3332221100
Q ss_pred -----------------------C-CeEEEEEccCCCEEEEEecC----------------CcEEEEEECCCcceeeEEe
Q psy3710 186 -----------------------A-PLSCIALNQTGTRLATASYK----------------GTLIRVFDTGSGQKLNELR 225 (424)
Q Consensus 186 -----------------------~-~v~~~~~~~~~~~l~~~~~d----------------~~~i~iwd~~~~~~~~~~~ 225 (424)
. ....+++.++...++.+..+ +. |..+|.++++.+-.++
T Consensus 211 ~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~-v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 211 NPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT-IWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp CGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE-EEEEETTTCCEEEEEE
T ss_pred cccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE-EEEEecCCCcEEEEec
Confidence 0 00235566766666666532 36 8999999999887776
Q ss_pred cc---------eee-e--eecCCCC--eEEEEeecCCeEEEEeCCCCCCCCeeeccC------------CCCe-------
Q psy3710 226 RG---------LCV-L--CPNSNNS--LLAFPGRKSGHVHLVDLADPERPPLDIAAH------------EAPL------- 272 (424)
Q Consensus 226 ~~---------~~~-~--~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~v------- 272 (424)
.. ... + ....+++ .+++.++.+|.++++|..+++.....-... ..++
T Consensus 290 ~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 369 (571)
T 2ad6_A 290 KTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT 369 (571)
T ss_dssp SSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred CCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence 32 111 1 1112454 456668889999999998876322111010 0111
Q ss_pred -------------------EEEEEcCCCCEEEEEe-------------------------------------CCCcEEEE
Q psy3710 273 -------------------SCIALNQTGTRLATAS-------------------------------------YKGTLIRV 296 (424)
Q Consensus 273 -------------------~~~~~~~~~~~l~~~~-------------------------------------~d~~~i~i 296 (424)
..++++|+..+++... .++. |..
T Consensus 370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~-l~a 448 (571)
T 2ad6_A 370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQ-IRA 448 (571)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEE-EEE
T ss_pred CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCe-EEE
Confidence 2467888877776654 2467 999
Q ss_pred EECCCCceeeeecc-----------CCcEEEEEeCCCcEEEEEccccccccc
Q psy3710 297 FDTGSGQKLNELRR-----------DSSYLCVSSDHGTVHVFSVDEAQKINK 337 (424)
Q Consensus 297 wd~~~~~~~~~~~~-----------~~~~l~~~~~d~~i~iw~~~~~~~~~~ 337 (424)
||+.+++.+.++.. .+..++.++.|+.|+.||.++|+.+-+
T Consensus 449 ~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~ 500 (571)
T 2ad6_A 449 FDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWN 500 (571)
T ss_dssp ECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEE
Confidence 99999998887641 356777789999999999999887644
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=1.5e-08 Score=96.60 Aligned_cols=272 Identities=15% Similarity=0.155 Sum_probs=165.5
Q ss_pred CeeEeecCCe-EEEEeCCcCcccccccccCCC---------eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE
Q psy3710 23 GCFACGMEDG-FRIYNCDPLKEKERQDFTDGG---------LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV 92 (424)
Q Consensus 23 ~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~ 92 (424)
..+.+++.++ |.-+|..+++.+......... ...-.....+..+++.+ .|+.|..+|.++|+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT-------LDGRLIALDAKTGKA 139 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC-------TTSEEEEEETTTCCE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc-------CCCEEEEEECCCCCE
Confidence 3455554455 888998888876554332110 00001112345555554 479999999999999
Q ss_pred EEEEeecC-----CeE-EEEecCCceEEEe--------eccEEEEeecCCCceeEEEeeCC-CCC---------------
Q psy3710 93 VICLEFNA-----PVK-GVRLRRDKIVVVL--------EGLIKVYTFIQCPQQLHVFETNP-NPK--------------- 142 (424)
Q Consensus 93 ~~~~~~~~-----~v~-~~~~~~~~~~~~~--------~~~i~v~~~~~~~~~~~~~~~~~-~~~--------------- 142 (424)
+.++.... .+. ...+. ++.+++. ++.|..+|.+ +++.+..+.... .+.
T Consensus 140 ~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 140 IWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDAD-TGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp EEEEECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETT-TCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred eeeeccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECC-CCcEEEEecccCCCCCccccccccccccccC
Confidence 98887421 111 11122 3444432 3789999986 788877765421 110
Q ss_pred -------------eeEEEeecCCCCeEEEeeccCC-------------------eEEEEeCCCCCCCCccccc--cc---
Q psy3710 143 -------------GLCVLCPNSNNSLLAFPGRKSG-------------------HVHLVDLADPERPPLDIAA--HE--- 185 (424)
Q Consensus 143 -------------~~~~~~~~~~~~~l~~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~--~~--- 185 (424)
....++++++...+++ +..++ .|..+|.+++ +.+-.++. |.
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG-~~~W~~~~~~~~~wd 295 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG-KLAWHYQVTPGDSWD 295 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESSTTCCSC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC-ceeeEeecCCCcccc
Confidence 0013466777777776 66665 4899999987 44443332 22
Q ss_pred ----CCeEEEEEccCCC---EEEEEecCCcEEEEEECCCcceeeEEecce------------------------------
Q psy3710 186 ----APLSCIALNQTGT---RLATASYKGTLIRVFDTGSGQKLNELRRGL------------------------------ 228 (424)
Q Consensus 186 ----~~v~~~~~~~~~~---~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~------------------------------ 228 (424)
.+.....+..+|+ .++.++.+|. ++++|.++++.+...+...
T Consensus 296 ~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 374 (668)
T 1kv9_A 296 FTATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMW 374 (668)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEES
T ss_pred ccCCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEEC
Confidence 2333333334665 6888999999 9999999999874432110
Q ss_pred ---------eeeeecCCCCeEEEEe-----------------------------------ecCCeEEEEeCCCCCCCCee
Q psy3710 229 ---------CVLCPNSNNSLLAFPG-----------------------------------RKSGHVHLVDLADPERPPLD 264 (424)
Q Consensus 229 ---------~~~~~~~~~~~~~~~~-----------------------------------~~dg~i~i~d~~~~~~~~~~ 264 (424)
..++++|+...+++.. ..+|.|..||+.+++..-+.
T Consensus 375 p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~ 454 (668)
T 1kv9_A 375 PSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKV 454 (668)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEE
T ss_pred CCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEc
Confidence 1145566655555421 12488999999987743222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 265 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 265 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
. +..+.....+...+.+++.++.|+. ++.||.++|+.+..+.
T Consensus 455 -~-~~~~~~~~~~~t~gg~vf~g~~dg~-l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 455 -P-YPTHWNGGTLSTAGNLVFQGTAAGQ-MHAYSADKGEALWQFE 496 (668)
T ss_dssp -E-ESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred -c-CCCCCcCceeEeCCCEEEEECCccc-chhhhhhcChhheEec
Confidence 1 2223333344456788999999999 9999999999998875
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.11 E-value=2.8e-06 Score=83.07 Aligned_cols=342 Identities=12% Similarity=0.096 Sum_probs=194.8
Q ss_pred CceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccc-------cccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEE
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQ-------DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~ 83 (424)
..|.++...++|.+.+....+|+..|+..+.+..... ......|.++....++...+... +-+.
T Consensus 163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~---------~Gl~ 233 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTS---------KGLA 233 (781)
T ss_dssp CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEET---------TEEE
T ss_pred cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeC---------CcHh
Confidence 4688888888887666544558999997765432111 11234576666666666554332 4789
Q ss_pred EEECCCCcEEEEEe--------ecCCeEEEEecCCceE-EEee-ccEEEEeecCCCceeEEEe-------eC-----CCC
Q psy3710 84 IWDDLKKQVVICLE--------FNAPVKGVRLRRDKIV-VVLE-GLIKVYTFIQCPQQLHVFE-------TN-----PNP 141 (424)
Q Consensus 84 iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~-~~~~-~~i~v~~~~~~~~~~~~~~-------~~-----~~~ 141 (424)
+||..+++...... ....|.++...+++.+ +++. +.|.+++.. ......... .. ...
T Consensus 234 ~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~l~~ 312 (781)
T 3v9f_A 234 LFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQ-QNQFLLPEQIRFEFIREGDNNYSLSN 312 (781)
T ss_dssp EEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETT-CC---------CEEECBCSSTTSBSS
T ss_pred eECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCC-CCeeeeeeccccccccCCCCCCCCCC
Confidence 99987665432111 1356899998888754 4454 788899875 332211111 00 112
Q ss_pred CeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc----------cccCCeEEEEEccCCCEEEEEecCCcEEE
Q psy3710 142 KGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA----------AHEAPLSCIALNQTGTRLATASYKGTLIR 211 (424)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~ 211 (424)
..+.++...++|.+.+ |..++-|..++.... ....+. .....|.++...++|. |..|+.++. |.
T Consensus 313 ~~v~~i~~D~~g~lWi--gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~G-l~ 386 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWI--GTWGGGINFISNAPP--TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGG-IN 386 (781)
T ss_dssp SCEEEEEECSSCCEEE--EEBSSCEEEECSSCC--SCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSC-EE
T ss_pred CeEEEEEEeCCCCEEE--EecCCeEEEeCCCCC--cceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCc-EE
Confidence 3477888888887555 777788899987753 222221 1235689999888775 556666666 99
Q ss_pred EEECCCcceeeEE-----e-cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeee-ccCCCCeEEEEEcCCCCEE
Q psy3710 212 VFDTGSGQKLNEL-----R-RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAPLSCIALNQTGTRL 284 (424)
Q Consensus 212 iwd~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l 284 (424)
.+|..+++...-. . ..+..++..+++. +.+ |+.++-+..+|..+++...... ......|.++...++|.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw 464 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW 464 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSC-EEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE
Confidence 9998765432211 1 1244455555554 333 7777789999887653111100 1234679999998887654
Q ss_pred EEEeCCCcEEEEEECCCCceeeee-----------------ccCCcEEEEEeCCCcEEEEEccccccccccccceeeecc
Q psy3710 285 ATASYKGTLIRVFDTGSGQKLNEL-----------------RRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFL 347 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~~~~~~~-----------------~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (424)
+ |+. +. +..+|..+++..... .++|. |..|+.++-|..|+..+++.. ....
T Consensus 465 i-gt~-~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~------- 532 (781)
T 3v9f_A 465 I-GTH-AG-VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVR-KFNQ------- 532 (781)
T ss_dssp E-EET-TE-EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEE-EECT-------
T ss_pred E-EEC-Cc-eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEE-EccC-------
Confidence 4 445 45 899998775432211 12333 333444344666776553221 1100
Q ss_pred CccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEec
Q psy3710 348 PKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFN 394 (424)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~ 394 (424)
+. ..+...+..+...++|+. ..++.+|.+..|+..
T Consensus 533 ~~-----------~l~~~~i~~i~~d~~g~l-Wi~T~~Glv~~~d~~ 567 (781)
T 3v9f_A 533 YE-----------GFCSNTINQIYRSSKGQM-WLATGEGLVCFPSAR 567 (781)
T ss_dssp TT-----------TCSCSCEEEEEECTTSCE-EEEETTEEEEESCTT
T ss_pred CC-----------CCCCCeeEEEEECCCCCE-EEEECCCceEEECCC
Confidence 00 012345667777777764 445556665777654
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=7.4e-08 Score=79.46 Aligned_cols=191 Identities=12% Similarity=0.003 Sum_probs=138.6
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecC--CeEEEEecCCceEEEe--eccEEEEeecCCC
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA--PVKGVRLRRDKIVVVL--EGLIKVYTFIQCP 129 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~ 129 (424)
...+.+++++ .|..+++.. .++.|.+.|+.+++.+..+.... ....+++..+..+++. ++.+.++|.. +.
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~-t~ 96 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLY----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR-TL 96 (266)
T ss_dssp EEEEEECSTT-EEEEEECST----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-TT
T ss_pred cccEEEeCCC-eEEEECCCC----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-CC
Confidence 4678888875 454444321 25899999999999999887433 3346777766666666 8999999986 77
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccc-----cCCeEEEEEccCCCEEEEEe
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH-----EAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~ 204 (424)
+.+..+... .+.+ .. .++|++.+++ +..++.|.++|..+. +....+.-- -...+.+.|. +|...+...
T Consensus 97 ~v~~~i~~g-~~~g-~g--lt~Dg~~l~v-s~gs~~l~viD~~t~-~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 97 SNIKNFTHQ-MKDG-WG--LATDGKILYG-SDGTSILYEIDPHTF-KLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp EEEEEEECC-SSSC-CE--EEECSSSEEE-ECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEECC-CCCe-EE--EEECCCEEEE-ECCCCeEEEEECCCC-cEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 888887654 1222 22 3457887877 556899999999886 444443321 1236688888 675555554
Q ss_pred cCCcEEEEEECCCcceeeEEecc----------------eeeeeecCCCCeEEEEeecCCeEEEEeCCCC
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRG----------------LCVLCPNSNNSLLAFPGRKSGHVHLVDLADP 258 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 258 (424)
.++. |.+.|..+++.+..++.+ ...++++|+++.+++++...+.+...++...
T Consensus 170 ~~~~-V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 170 QTDC-IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TSSE-EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCe-EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 5677 999999999999888742 2678999999999999999999999998764
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.10 E-value=1.8e-08 Score=94.08 Aligned_cols=272 Identities=11% Similarity=0.083 Sum_probs=159.4
Q ss_pred eeEeecC-Ce-EEEEeC-CcCcccccccccCC-Ce--------eeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 24 CFACGME-DG-FRIYNC-DPLKEKERQDFTDG-GL--------GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 24 ~la~g~~-~~-i~iw~~-~~~~~~~~~~~~~~-~i--------~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
.+.+++. ++ |.-+|. ++++.+........ .+ ..-.....+..+++.+ .|+.+..+|.++|+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ-------ANGHLLALDAKTGK 136 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEe-------CCCEEEEEECCCCC
Confidence 4444444 44 888998 88887554433211 00 0001112355555554 47999999999999
Q ss_pred EEEEEeecC-----CeE-EEEecCCceEEEe-------eccEEEEeecCCCceeEEEeeCCCCC----------------
Q psy3710 92 VVICLEFNA-----PVK-GVRLRRDKIVVVL-------EGLIKVYTFIQCPQQLHVFETNPNPK---------------- 142 (424)
Q Consensus 92 ~~~~~~~~~-----~v~-~~~~~~~~~~~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~---------------- 142 (424)
.+.+..... .+. ...+..+..++.. ++.|..+|.+ +++.+..+.......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~-tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLK-TGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETT-TCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECC-CCcEEEEEccCCCccccccCccccccccccc
Confidence 998876432 222 1122233333333 3689999986 777777665432110
Q ss_pred -----------------e---eEEEeecCCCCeEEEeeccC----------------CeEEEEeCCCCCCCCccccc--c
Q psy3710 143 -----------------G---LCVLCPNSNNSLLAFPGRKS----------------GHVHLVDLADPERPPLDIAA--H 184 (424)
Q Consensus 143 -----------------~---~~~~~~~~~~~~l~~~~~~d----------------g~i~i~d~~~~~~~~~~~~~--~ 184 (424)
. ...+++.++...+++ +..+ +.|..+|.+++ +.+-.++. |
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~-~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG-~~~W~~~~~~~ 293 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYY-GSGNPAPWNETMRPGDNKWTMTIWGRDLDTG-MAKWGYQKTPH 293 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEE-ECCCCSCSCGGGSCSCCTTTTEEEEEETTTC-CEEEEEESSTT
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCCeEEE-ECCCCccccCCccCCCceeEEEEEEEecCCC-cEEEEecCCCC
Confidence 0 011334455555655 4321 36889999886 44333321 2
Q ss_pred --------cCCeEEEEEccCCC---EEEEEecCCcEEEEEECCCcceeeEEecce-------------------------
Q psy3710 185 --------EAPLSCIALNQTGT---RLATASYKGTLIRVFDTGSGQKLNELRRGL------------------------- 228 (424)
Q Consensus 185 --------~~~v~~~~~~~~~~---~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~------------------------- 228 (424)
..++. +...++|+ .++.++.+|. ++++|..+++.+..++...
T Consensus 294 d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~ 371 (571)
T 2ad6_A 294 DEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRM 371 (571)
T ss_dssp CSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCT
T ss_pred cccccccCCCCEE-EecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCC
Confidence 12221 22234674 5777888998 9999999998876654211
Q ss_pred -----------------eeeeecCCCCeEEEEee------------------------------------cCCeEEEEeC
Q psy3710 229 -----------------CVLCPNSNNSLLAFPGR------------------------------------KSGHVHLVDL 255 (424)
Q Consensus 229 -----------------~~~~~~~~~~~~~~~~~------------------------------------~dg~i~i~d~ 255 (424)
..++++|+...+++... .+|.|..||+
T Consensus 372 ~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~ 451 (571)
T 2ad6_A 372 DHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDL 451 (571)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECT
T ss_pred CCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEEC
Confidence 12356666666655321 3578999999
Q ss_pred CCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc
Q psy3710 256 ADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 310 (424)
Q Consensus 256 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 310 (424)
.+++..-. .. +...+....+...+..++.++.|+. |+.+|.++|+.+.++..
T Consensus 452 ~tG~~~W~-~~-~~~~~~~~~~~t~gg~v~~g~~dg~-l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 452 TTGKAKWT-KW-EKFAAWGGTLYTKGGLVWYATLDGY-LKALDNKDGKELWNFKM 503 (571)
T ss_dssp TTCCEEEE-EE-ESSCCCSBCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEEC
T ss_pred CCCCEEEE-ec-CCCCccceeEEECCCEEEEEcCCCe-EEEEECCCCCEEEEEeC
Confidence 98774322 21 1222222233334567888999999 99999999999998763
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.10 E-value=1.8e-08 Score=91.80 Aligned_cols=249 Identities=13% Similarity=0.091 Sum_probs=169.2
Q ss_pred CCeeeEEEec-----cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe--ecCCeEEEEe-c-CCceEEEe------
Q psy3710 52 GGLGHVEMLF-----RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--FNAPVKGVRL-R-RDKIVVVL------ 116 (424)
Q Consensus 52 ~~i~~~~~~~-----~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~-~-~~~~~~~~------ 116 (424)
+......+++ |++++.+.... +.+|.+.|+.+.++.+.+. ....+..+++ + |++.++..
T Consensus 85 gd~hh~~~s~t~g~~DG~~lfVnd~~------~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~ 158 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFLFMNDKA------NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDET 158 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEEEEEETT------TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCE
T ss_pred CCCCccccCCCCCCcCCCEEEEEcCC------CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEeccccc
Confidence 4444566766 88888887653 6899999999999888665 3466888887 4 77765544
Q ss_pred ---------------eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCC--------------eEE
Q psy3710 117 ---------------EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSG--------------HVH 167 (424)
Q Consensus 117 ---------------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg--------------~i~ 167 (424)
++.+.++|.+ +.+....+.....+.. +..+|+|++++++..... .|.
T Consensus 159 p~~~dg~~l~~~~~~~~~vtvID~~-t~~v~~qI~Vgg~pd~---~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~ 234 (595)
T 1fwx_A 159 PLVNDGTNMEDVANYVNVFTAVDAD-KWEVAWQVLVSGNLDN---CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIV 234 (595)
T ss_dssp ESSCSSSSTTCGGGEEEEEEEEETT-TTEEEEEEEESSCCCC---EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEE
T ss_pred ccCCCCcccccccccCceEEEEECC-CCeEEEEEEeCCCccc---eEECCCCCEEEEEecCcccCcchhhccccccceEE
Confidence 2478999986 7777777776444443 467899999998443332 233
Q ss_pred EEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCC--cce-eeEEec--ceeeeeecCCCCeEEE
Q psy3710 168 LVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS--GQK-LNELRR--GLCVLCPNSNNSLLAF 242 (424)
Q Consensus 168 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~--~~~-~~~~~~--~~~~~~~~~~~~~~~~ 242 (424)
+.|..... .+.++|+.... +. |.+.|.++ ++. +..++. ....+.++|+|+++++
T Consensus 235 V~~~~~~~----------------~~v~~Gk~~~i----~~-V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V 293 (595)
T 1fwx_A 235 VFNIAEIE----------------KAIAAGDYQEL----NG-VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV 293 (595)
T ss_dssp EEEHHHHH----------------HHHHHTCSEEE----TT-EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE
T ss_pred Eeecccee----------------EeccCCCeeEE----Cc-EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE
Confidence 33322110 12344554433 55 99999998 555 455553 3677899999999999
Q ss_pred EeecCCeEEEEeCCCCCC-----------CCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCC----------
Q psy3710 243 PGRKSGHVHLVDLADPER-----------PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGS---------- 301 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~---------- 301 (424)
++..+.+|.++|+.+.+. ..... .-......++|+|+|....+.-.|+. |.+||+.+
T Consensus 294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~ 371 (595)
T 1fwx_A 294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKV 371 (595)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSC
T ss_pred eCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhccccc
Confidence 999999999999986420 11111 23456789999999944445556777 99999976
Q ss_pred Cceeee-----------------eccCCcEEEEEeC---CCc----------EEEEEccccc
Q psy3710 302 GQKLNE-----------------LRRDSSYLCVSSD---HGT----------VHVFSVDEAQ 333 (424)
Q Consensus 302 ~~~~~~-----------------~~~~~~~l~~~~~---d~~----------i~iw~~~~~~ 333 (424)
.+.+.. ++|||++|+++.. |+. -.++|+.+++
T Consensus 372 ~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 372 DPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred ceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 333332 3589999998764 432 1789996543
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=2.8e-08 Score=90.46 Aligned_cols=235 Identities=13% Similarity=0.071 Sum_probs=155.9
Q ss_pred CCCCeeEeecCCe--EEEEeCCcCcccccccccC-CCeeeEEE-e-ccCceEEEEeCCcC-----------CCcCCCeEE
Q psy3710 20 QDQGCFACGMEDG--FRIYNCDPLKEKERQDFTD-GGLGHVEM-L-FRCNYLALVGGGTH-----------PKYPNNRVM 83 (424)
Q Consensus 20 ~~g~~la~g~~~~--i~iw~~~~~~~~~~~~~~~-~~i~~~~~-~-~~~~~l~~~~~~~~-----------~~~~d~~i~ 83 (424)
+||++|.+...+. |.+.|+++.+.....+.+. .....+.+ . |+++++++.+.... +...++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 3888888765544 9999999988755334432 34666776 4 89999877752211 111357999
Q ss_pred EEECCCCcEEEEEeecCCeEEEEecCCceEEEe----e--------------c-----------------------cEEE
Q psy3710 84 IWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL----E--------------G-----------------------LIKV 122 (424)
Q Consensus 84 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~--------------~-----------------------~i~v 122 (424)
+.|.++.+.+.++.-.+....++++|++.+++. + . .|.|
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999999999986557788889998866654 1 1 3555
Q ss_pred EeecCC-Cce-eEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC-----------CCcccccccCCeE
Q psy3710 123 YTFIQC-PQQ-LHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER-----------PPLDIAAHEAPLS 189 (424)
Q Consensus 123 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~v~ 189 (424)
.|.+.. +.. +..+.....+ .++.++|||+++++++..+..|.++|+.+... ....+. -.....
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~P---hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNP---HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSC---CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EeCcccCCceeEEEEecCCCc---eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 665420 222 3444433333 34688999999999788899999999985310 111121 124568
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEECCC----------cceeeEEeccee--------eeeecCCCCeEEEEeecC-CeE
Q psy3710 190 CIALNQTGTRLATASYKGTLIRVFDTGS----------GQKLNELRRGLC--------VLCPNSNNSLLAFPGRKS-GHV 250 (424)
Q Consensus 190 ~~~~~~~~~~l~~~~~d~~~i~iwd~~~----------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~d-g~i 250 (424)
.++|+|+|...++.-.|+. |.+||+.+ .+.+..+..+.. ....+|+|++++++.... ..+
T Consensus 335 h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred eEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 9999999944455667787 99999977 456666665422 235689999998865433 333
Q ss_pred -----------EEEeCCCCC
Q psy3710 251 -----------HLVDLADPE 259 (424)
Q Consensus 251 -----------~i~d~~~~~ 259 (424)
.++|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 888885433
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=9.9e-07 Score=74.06 Aligned_cols=218 Identities=8% Similarity=0.032 Sum_probs=131.6
Q ss_pred CeEEEEECCCCcE-----EEEEe-ecCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEee
Q psy3710 80 NRVMIWDDLKKQV-----VICLE-FNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 80 ~~i~iwd~~~~~~-----~~~~~-~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
+.|+.+++..... ...+. ....+..+++++++ .+..+ .+.|..++.. .......+.. .......+++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~~~--~~~~p~~ia~ 86 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH-GGEPTTIIRQ--DLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESS-SCCCEEEECT--TCCCEEEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecC-CCCcEEEEEC--CCCCccEEEE
Confidence 5788888765432 11122 23457899999854 44444 5789999985 3332222221 1134567888
Q ss_pred cCCCCeEEEeeccCCeEEEEeCCCCCCCCcccc-cccCCeEEEEEccCCCEEEEEec---CCcEEEEEECCCcceeeEEe
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASY---KGTLIRVFDTGSGQKLNELR 225 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~~i~iwd~~~~~~~~~~~ 225 (424)
++++..|.++....+.|.+++++.. ....+. ........++++|++..|+.+.. .+. |..+++.... ...+.
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~--~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~-I~~~~~dg~~-~~~~~ 162 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGT--QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK-IETSHMDGTN-RRILA 162 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCE-EEEEETTSCC-CEEEE
T ss_pred EecCCeEEEEECCCCEEEEEEcCCC--CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcE-EEEEecCCCC-cEEEE
Confidence 8877777764667889999998753 222222 22245789999997666655554 356 8888875432 22222
Q ss_pred ----cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEECC
Q psy3710 226 ----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTG 300 (424)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~ 300 (424)
.....++++++++.++++....+.|..+|+..... ..... .......++.. +..|+.+.. .+. |..+|..
T Consensus 163 ~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~-v~~~d~~ 237 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLE-GLQYPFAVTSY--GKNLYYTDWKTNS-VIAMDLA 237 (267)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEE-CCCSEEEEEEE--TTEEEEEETTTTE-EEEEETT
T ss_pred ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEec-CCCCceEEEEe--CCEEEEEECCCCe-EEEEeCC
Confidence 22567889999999988888889999999875321 11111 12233455543 344444443 345 7777777
Q ss_pred CCceeeeec
Q psy3710 301 SGQKLNELR 309 (424)
Q Consensus 301 ~~~~~~~~~ 309 (424)
+++.+.++.
T Consensus 238 ~g~~~~~i~ 246 (267)
T 1npe_A 238 ISKEMDTFH 246 (267)
T ss_dssp TTEEEEEEC
T ss_pred CCCceEEEc
Confidence 766665554
No 252
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.99 E-value=5.5e-06 Score=68.99 Aligned_cols=213 Identities=13% Similarity=0.176 Sum_probs=145.5
Q ss_pred EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEec-CCc
Q psy3710 33 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLR-RDK 111 (424)
Q Consensus 33 i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~-~~~ 111 (424)
|.|.|+.......+... .. -+.-+.|..+.+|+-. ..++.++|+++.+.++.+..+.+|.--+|- ++.
T Consensus 51 VvIiDl~n~~~~~Rrpi-~A--dsAIMnP~~~ViALra--------g~~LQiFnletK~klks~~~~e~VvfWkWis~~~ 119 (365)
T 2xzh_A 51 VVIIDMNDPSNPIRRPI-SA--DSAIMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT 119 (365)
T ss_dssp EEEEETTSTTSCEEEEC-CC--SEEEECSSSSEEEEEE--------TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSE
T ss_pred EEEEECCCCCCcccccc-cc--ceeeeCCCccEEEEec--------CCeEEEechHHhhhhcceecCCccEEEEecCCCe
Confidence 99999988766433322 11 1234578888888776 379999999999999999988899888885 555
Q ss_pred eEEEeeccEEEEeecCCCceeEEEeeCCC--CCeeEEEeecCCCCeEEEeec------cCCeEEEEeCCCCCCCCccccc
Q psy3710 112 IVVVLEGLIKVYTFIQCPQQLHVFETNPN--PKGLCVLCPNSNNSLLAFPGR------KSGHVHLVDLADPERPPLDIAA 183 (424)
Q Consensus 112 ~~~~~~~~i~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~ 183 (424)
..++++..|+.|++..+..+.+.+..|.. ...+.....+++.++++..|- -.|.+.+|..+. +.-+.+++
T Consensus 120 L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieG 197 (365)
T 2xzh_A 120 VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEG 197 (365)
T ss_dssp EEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECC
T ss_pred EEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeee
Confidence 77777999999999766677777776542 456778888999999887553 358899999986 45567788
Q ss_pred ccCCeEEEEEccC---CCEEEEEecC---CcEEEEEECCCc---ce-----eeEEe--c----c-eeeeeecCCCCeEEE
Q psy3710 184 HEAPLSCIALNQT---GTRLATASYK---GTLIRVFDTGSG---QK-----LNELR--R----G-LCVLCPNSNNSLLAF 242 (424)
Q Consensus 184 ~~~~v~~~~~~~~---~~~l~~~~~d---~~~i~iwd~~~~---~~-----~~~~~--~----~-~~~~~~~~~~~~~~~ 242 (424)
|.+.-..+.+..+ ...++.+... +. +++.++... .. ...+. . + .-.+..++..+.+.+
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEE-EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 8665544443322 1234444332 46 899998543 11 11111 1 1 233445555555444
Q ss_pred EeecCCeEEEEeCCCCCC
Q psy3710 243 PGRKSGHVHLVDLADPER 260 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~ 260 (424)
-+.-|.|++||+.++..
T Consensus 277 -iTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 277 -ITKYGYIHLYDLETGTC 293 (365)
T ss_dssp -EETTSEEEEEETTTCCE
T ss_pred -EeCCcEEEEEEcccCcE
Confidence 78999999999998763
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.99 E-value=1.6e-07 Score=87.74 Aligned_cols=270 Identities=10% Similarity=0.055 Sum_probs=158.1
Q ss_pred eeEeecC-Ce-EEEEeC-CcCcccccccccCCC-----------eeeEEEeccCce----EEEEeCCcCCCcCCCeEEEE
Q psy3710 24 CFACGME-DG-FRIYNC-DPLKEKERQDFTDGG-----------LGHVEMLFRCNY----LALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 24 ~la~g~~-~~-i~iw~~-~~~~~~~~~~~~~~~-----------i~~~~~~~~~~~----l~~~~~~~~~~~~d~~i~iw 85 (424)
.+.+++. ++ |.-+|. ++++.+......... ...+...|.+.. +++.+ .|+.|..+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t-------~dg~l~Al 136 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ-------LDGNVAAL 136 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC-------TTSEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc-------CCCEEEEE
Confidence 4444444 44 888888 788775544332110 112344334444 55554 47999999
Q ss_pred ECCCCcEEEEEeecC-----CeE-EEEecCCceEEE-e-------eccEEEEeecCCCceeEEEeeCCCCCe--------
Q psy3710 86 DDLKKQVVICLEFNA-----PVK-GVRLRRDKIVVV-L-------EGLIKVYTFIQCPQQLHVFETNPNPKG-------- 143 (424)
Q Consensus 86 d~~~~~~~~~~~~~~-----~v~-~~~~~~~~~~~~-~-------~~~i~v~~~~~~~~~~~~~~~~~~~~~-------- 143 (424)
|.++|+.+.+..... .+. ...+. ++.+++ . ++.|+.+|.+ +++.+..+........
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~-TG~~~W~~~~~~~~~~~~~~p~~~ 214 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVK-TGEQVWRAYATGPDKDLLLASDFN 214 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETT-TCCEEEEEESSSCHHHHTBCTTTT
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECC-CCcEEEEEcCCCCccccccccccc
Confidence 999999998876322 222 11222 344443 3 4789999986 7777776654321100
Q ss_pred ---------------------------e-EEEeecCCCCeEEEeeccC----------------CeEEEEeCCCCCCCCc
Q psy3710 144 ---------------------------L-CVLCPNSNNSLLAFPGRKS----------------GHVHLVDLADPERPPL 179 (424)
Q Consensus 144 ---------------------------~-~~~~~~~~~~~l~~~~~~d----------------g~i~i~d~~~~~~~~~ 179 (424)
+ ..+++.++...+++ +..+ +.|..+|.+++ +.+-
T Consensus 215 ~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~-g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG-~~~W 292 (599)
T 1w6s_A 215 IKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYF-GTGNPAPWNETMRPGDNKWTMTIFGRDADTG-EAKF 292 (599)
T ss_dssp TTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEE-ECCCCSCSCGGGSCSCCTTSSEEEEEETTTC-CEEE
T ss_pred cccccccccccccccCCCcceecCCCccccceeEeCCCCEEEE-eCCCCccccCcccCCCccccceEEEEeCCCC-ceee
Confidence 0 02234456666665 5443 47889999887 4443
Q ss_pred cccc--cc--------CCeEEEEEc-cCC---CEEEEEecCCcEEEEEECCCcceeeEEecce-----------------
Q psy3710 180 DIAA--HE--------APLSCIALN-QTG---TRLATASYKGTLIRVFDTGSGQKLNELRRGL----------------- 228 (424)
Q Consensus 180 ~~~~--~~--------~~v~~~~~~-~~~---~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~----------------- 228 (424)
.++. |. .++. +... .+| +.++.++.+|. ++++|.++++.+...+...
T Consensus 293 ~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 370 (599)
T 1w6s_A 293 GYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVR 370 (599)
T ss_dssp EEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEE
T ss_pred EeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeecccccCCcccccccccCCCceee
Confidence 3332 21 2222 2222 467 46777889999 9999999998876654210
Q ss_pred -------------------------eeeeecCCCCeEEEEe--------------------------------e------
Q psy3710 229 -------------------------CVLCPNSNNSLLAFPG--------------------------------R------ 245 (424)
Q Consensus 229 -------------------------~~~~~~~~~~~~~~~~--------------------------------~------ 245 (424)
..++++|+.+.+++.. +
T Consensus 371 ~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~ 450 (599)
T 1w6s_A 371 DPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYE 450 (599)
T ss_dssp CGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTB
T ss_pred ccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCC
Confidence 1234555544443311 1
Q ss_pred cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 246 KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 246 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
..|.|..||+.+++..-..- +..+...-.+...+.+++.++.|+. ++.||.++|+.+.++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~--~~~~~~~g~~~tagg~vf~gt~dg~-l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKM--ERFAVWGGTMATAGDLVFYGTLDGY-LKARDSDTGDLLWKFK 511 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEE--ESSCCCSBCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred CcCeEEEEECCCCCEEeEec--CCCCccCcceEecCCEEEEECCCCe-EEEEECCCCCEEEEee
Confidence 34788999998877432221 1112211112235667888999999 9999999999999885
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.98 E-value=4.4e-07 Score=84.80 Aligned_cols=273 Identities=12% Similarity=0.079 Sum_probs=157.8
Q ss_pred CCCeeEeecCCeEEEEeCCcCcccccccccCCCe---------eeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 21 DQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGL---------GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 21 ~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i---------~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
++..++++..++|.-+|.++++.+.......... ..+. ..+..+++.+ .|+.|.-+|.++|+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a--~~~~~v~~~t-------~dg~l~AlD~~TG~ 138 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAA--IYGDKVFFGT-------LDASVVALNKNTGK 138 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCE--EETTEEEEEE-------TTTEEEEEESSSCC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccE--EECCEEEEEe-------CCCEEEEEECCCCC
Confidence 4444444443558889998888865544322110 1111 2345555555 47999999999999
Q ss_pred EEEEEeecC-----CeE-EEEecCC---c--eEEE-e-------eccEEEEeecCCCceeEEEeeCCCCC----------
Q psy3710 92 VVICLEFNA-----PVK-GVRLRRD---K--IVVV-L-------EGLIKVYTFIQCPQQLHVFETNPNPK---------- 142 (424)
Q Consensus 92 ~~~~~~~~~-----~v~-~~~~~~~---~--~~~~-~-------~~~i~v~~~~~~~~~~~~~~~~~~~~---------- 142 (424)
.+.+..... .+. ...+..+ + .+++ . ++.|..+|.. +++.+..........
T Consensus 139 ~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~-tG~~~W~~~~~~~~~~p~~~~~~~~ 217 (582)
T 1flg_A 139 VVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPD-TGEEIWMRPFVEGHMGRLNGKDSTV 217 (582)
T ss_dssp EEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTT-TCCEEEEEESSTTCEEEETTEEEEE
T ss_pred EEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECC-CCCEEeecCCCccccccccCccccc
Confidence 998876322 111 1112222 1 2333 2 4678888886 677666543321000
Q ss_pred -----------------------------eeEEEeecCCCCeEEEeecc--------------------C----CeEEEE
Q psy3710 143 -----------------------------GLCVLCPNSNNSLLAFPGRK--------------------S----GHVHLV 169 (424)
Q Consensus 143 -----------------------------~~~~~~~~~~~~~l~~~~~~--------------------d----g~i~i~ 169 (424)
.-..++++|+...+++ +.. | +.|..+
T Consensus 218 ~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv-~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~Al 296 (582)
T 1flg_A 218 TGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIV-GAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGV 296 (582)
T ss_dssp SSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEE-EECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEE
T ss_pred ccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEE-eCCCCCcccCcccccCCCcccccCCcccceEEEE
Confidence 0012344556666665 332 2 689999
Q ss_pred eCCCCCCCCcccc--ccc--------CCeEEEEEc-cCCC---EEEEEecCCcEEEEEECCCcceeeEEecce-------
Q psy3710 170 DLADPERPPLDIA--AHE--------APLSCIALN-QTGT---RLATASYKGTLIRVFDTGSGQKLNELRRGL------- 228 (424)
Q Consensus 170 d~~~~~~~~~~~~--~~~--------~~v~~~~~~-~~~~---~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~------- 228 (424)
|..++ +.+-.++ .|. .++. +... .+|+ .++.++.+|. ++++|.++++.+..++...
T Consensus 297 D~~TG-~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~~~~~~~~~~ 373 (582)
T 1flg_A 297 DPSSG-EVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPFVDNITWASH 373 (582)
T ss_dssp CTTTC-CEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEESSSCCCSEEE
T ss_pred eCCCC-CEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCce-EEEEECCCCCEecccccccCcccccc
Confidence 99887 4444332 221 1221 2221 4674 6788899999 9999999998886654321
Q ss_pred -----------------------------------------eeeeecCCCCeEEEEee----------------------
Q psy3710 229 -----------------------------------------CVLCPNSNNSLLAFPGR---------------------- 245 (424)
Q Consensus 229 -----------------------------------------~~~~~~~~~~~~~~~~~---------------------- 245 (424)
..++++|....+++...
T Consensus 374 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 453 (582)
T 1flg_A 374 IDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGM 453 (582)
T ss_dssp ECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecc
Confidence 01234454444444221
Q ss_pred ----------cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeecc
Q psy3710 246 ----------KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 310 (424)
Q Consensus 246 ----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 310 (424)
.+|.|..||+.+++..-+. .. ..++..-.....+.+++.++.|+. ++.||.++|+.+.++..
T Consensus 454 ~~~~~p~~~~~~G~l~A~D~~tG~~~W~~-~~-~~~~~~g~~~tagglvf~g~~dg~-l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 454 GFRIKRMYDDHVGSLRAMDPVSGKVVWEH-KE-HLPLWAGVLATAGNLVFTGTGDGY-FKAFDAKSGKELWKFQT 525 (582)
T ss_dssp EEEEEESCSSCSEEEEEECTTTCCEEEEE-EE-SSCCCSCCEEETTTEEEEECTTSE-EEEEETTTCCEEEEEEC
T ss_pred ceeecCCCCCCcceEEEEECCCCCEEEEe-cC-CCCCcccceEeCCCEEEEECCCCc-EEEEECCCCCEEEEecC
Confidence 2578999999988743222 11 112221112224668888999999 99999999999998864
No 255
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.94 E-value=1.6e-05 Score=68.94 Aligned_cols=213 Identities=13% Similarity=0.180 Sum_probs=148.5
Q ss_pred EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEe-cCCc
Q psy3710 33 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRL-RRDK 111 (424)
Q Consensus 33 i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~-~~~~ 111 (424)
|.|.|+.......+... .. -+.-+.|..+.+|+-. ..++.|+|+++.+.++.+..+.+|.--.| +++.
T Consensus 50 vvIiDl~~~~~~~rrpi-~A--dsAIMnP~~~iiALra--------g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~ 118 (494)
T 1bpo_A 50 VVIIDMNDPSNPIRRPI-SA--DSAIMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT 118 (494)
T ss_dssp EEEEETTSTTSCEEEEC-CC--SEEEECSSSSCEEEEE--------TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTE
T ss_pred EEEEECCCCCcceeccc-cc--ceeeeCCCCcEEEEec--------CCeEEEEchHHhhhhcceecCCCceEEEecCCCe
Confidence 99999887766533322 11 1244678888888776 37999999999999999998888888777 5666
Q ss_pred eEEEeeccEEEEeecCCCceeEEEeeCCC--CCeeEEEeecCCCCeEEEeec------cCCeEEEEeCCCCCCCCccccc
Q psy3710 112 IVVVLEGLIKVYTFIQCPQQLHVFETNPN--PKGLCVLCPNSNNSLLAFPGR------KSGHVHLVDLADPERPPLDIAA 183 (424)
Q Consensus 112 ~~~~~~~~i~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~ 183 (424)
..++++..|+.|++..+..+.+.+..|.. ...+.....+++.++++..|- -.|.+.+|..+. +.-+.+++
T Consensus 119 l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieG 196 (494)
T 1bpo_A 119 VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEG 196 (494)
T ss_dssp EEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECC
T ss_pred EEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchhee
Confidence 77778999999999756677777776542 456788888999999987553 358899999986 56677888
Q ss_pred ccCCeEEEEEccCC---CEEEEEecC---CcEEEEEECCCc---ce-----eeEEe--c----c-eeeeeecCCCCeEEE
Q psy3710 184 HEAPLSCIALNQTG---TRLATASYK---GTLIRVFDTGSG---QK-----LNELR--R----G-LCVLCPNSNNSLLAF 242 (424)
Q Consensus 184 ~~~~v~~~~~~~~~---~~l~~~~~d---~~~i~iwd~~~~---~~-----~~~~~--~----~-~~~~~~~~~~~~~~~ 242 (424)
|.+....+.+..+. ..++.+... +. +++.++... .. ...+. . + .-.+.+++..+.+.+
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCE-EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 87766555543321 234444432 56 999998543 11 11111 1 1 234555666665554
Q ss_pred EeecCCeEEEEeCCCCCC
Q psy3710 243 PGRKSGHVHLVDLADPER 260 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~ 260 (424)
-+.-|.|++||+.++..
T Consensus 276 -iTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 276 -ITKYGYIHLYDLETGTC 292 (494)
T ss_dssp -EETTSEEEEEETTTCCE
T ss_pred -EecCceEEEEeccccee
Confidence 88999999999998764
No 256
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=9.7e-07 Score=72.83 Aligned_cols=197 Identities=12% Similarity=-0.052 Sum_probs=127.8
Q ss_pred ccCC--ceEEEEECCCCCeeEeecC---CeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 8 TYKN--GLLYAGFNQDQGCFACGME---DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 8 ~h~~--~V~~~~~s~~g~~la~g~~---~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.|.. ....++|+||+.++++.+. +.|.++|..+++......... ......+.++++.+..+... ++.+
T Consensus 16 p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~~------~~~v 88 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLLNEKLYQVVWL------KNIG 88 (266)
T ss_dssp ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEETT------CSEE
T ss_pred ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEeCCEEEEEEec------CCEE
Confidence 4553 3578999998755554432 339999999998865544322 22223455567777777653 7999
Q ss_pred EEEECCCCcEEEEEeec-CCeEEEEecCCc-eEEEe--eccEEEEeecCCCceeEEEeeCCCCC---eeEEEeecCCCCe
Q psy3710 83 MIWDDLKKQVVICLEFN-APVKGVRLRRDK-IVVVL--EGLIKVYTFIQCPQQLHVFETNPNPK---GLCVLCPNSNNSL 155 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~-~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 155 (424)
.++|..+.+.+.++... ..-..+ ++|+ .++++ ++.|.++|.. +.+.+..+.....+. ....+.+. ++..
T Consensus 89 ~viD~~t~~v~~~i~~g~~~g~gl--t~Dg~~l~vs~gs~~l~viD~~-t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKDGWGL--ATDGKILYGSDGTSILYEIDPH-TFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEETTTTEEEEEEECCSSSCCEE--EECSSSEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEECCCCcEEEEEECCCCCeEEE--EECCCEEEEECCCCeEEEEECC-CCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 99999999999998855 333344 4454 33334 6789999986 667777666432211 24456666 6654
Q ss_pred EEEeeccCCeEEEEeCCCCCCCCcccccc-------------cCCeEEEEEccCCCEEEE-EecCCcEEEEEECCCc
Q psy3710 156 LAFPGRKSGHVHLVDLADPERPPLDIAAH-------------EAPLSCIALNQTGTRLAT-ASYKGTLIRVFDTGSG 218 (424)
Q Consensus 156 l~~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~-~~~d~~~i~iwd~~~~ 218 (424)
.+. ...++.|.+.|..++ +....+... ......|+|+|+++.++. +...+. +...++...
T Consensus 165 yvn-~~~~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~~ 238 (266)
T 2iwa_A 165 WAN-IWQTDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHLV 238 (266)
T ss_dssp EEE-ETTSSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEEC
T ss_pred EEe-cCCCCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEecc
Confidence 443 667889999999987 444444321 135689999999876555 445666 777777543
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.91 E-value=6.7e-07 Score=72.83 Aligned_cols=177 Identities=16% Similarity=0.133 Sum_probs=123.2
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCe--EEEEecCCceEEEe--eccEEEEeecCCC
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL--EGLIKVYTFIQCP 129 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~--~~~i~v~~~~~~~ 129 (424)
...+.+. ++ .|..+.+.. ....|+++|+++++.+.++...... ..+.+..+..+++. ++.+.+||.. +.
T Consensus 45 tqGL~~~-~~-~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-t~ 117 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLN----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-NL 117 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEET----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TC
T ss_pred cceEEEE-CC-EEEEECCCC----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-cC
Confidence 3557776 44 444333321 1249999999999999999866555 34677777777777 8999999996 88
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccc--c---CCeEEEEEccCCCEEEEEe
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH--E---APLSCIALNQTGTRLATAS 204 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~~~~ 204 (424)
+.+.++....... ..+++++.|+. +..++.|.++|..+. +....+... . ..++.+.|. +|+..+..-
T Consensus 118 ~~~~ti~~~~eG~-----glt~dg~~L~~-SdGs~~i~~iDp~T~-~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 118 RQVRSFNYDGEGW-----GLTHNDQYLIM-SDGTPVLRFLDPESL-TPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp CEEEEEECSSCCC-----CEEECSSCEEE-CCSSSEEEEECTTTC-SEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEECCCCce-----EEecCCCEEEE-ECCCCeEEEEcCCCC-eEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 8888887654332 22346777777 445788999999886 444443321 1 334567776 676555555
Q ss_pred cCCcEEEEEECCCcceeeEEecc---------------eeeeeecCCCCeEEEEeec
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRG---------------LCVLCPNSNNSLLAFPGRK 246 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 246 (424)
.+.. |.+.|.++++.+..+... .+.++++|+++.++++|-.
T Consensus 190 ~~~~-I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 190 QTNK-IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TSSE-EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred cCCe-EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6777 999999999998877642 3668999999999987743
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.91 E-value=4.5e-07 Score=73.82 Aligned_cols=172 Identities=11% Similarity=0.057 Sum_probs=124.0
Q ss_pred eeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeE--EEEecCCceEEEe--eccEEEEeecCCCc
Q psy3710 55 GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVK--GVRLRRDKIVVVL--EGLIKVYTFIQCPQ 130 (424)
Q Consensus 55 ~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~--~~~i~v~~~~~~~~ 130 (424)
..+.+. ++.|..+.+. ++.|+++|+++++.+..+ ...... .+++..+..+++. ++.+.+||.. +.+
T Consensus 58 qGL~~~--~~~Ly~stG~------~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~-Tl~ 127 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGH------QGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM-PPQ 127 (268)
T ss_dssp EEEEEE--TTEEEEEETT------TTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT-TTE
T ss_pred ceEEEE--CCEEEEEcCC------CCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC-cCc
Confidence 445554 5666655553 688999999999999988 766554 4777777777777 8999999996 888
Q ss_pred eeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccc--cc---CCeEEEEEccCCCEEEEEec
Q psy3710 131 QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HE---APLSCIALNQTGTRLATASY 205 (424)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~ 205 (424)
.+.++....... .++ ++++.|+. +..++.|.++|..+. +....+.. +. ..++.+.|. +|+..+....
T Consensus 128 ~~~ti~~~~eGw---GLt--~Dg~~L~v-SdGs~~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 128 RERTTRYSGEGW---GLC--YWNGKLVR-SDGGTMLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp EEEEEECSSCCC---CEE--EETTEEEE-ECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEEEeCCCcee---EEe--cCCCEEEE-ECCCCEEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence 888888654332 223 46778877 456899999999886 44444332 21 245667777 6765555545
Q ss_pred CCcEEEEEECCCcceeeEEecc----------------eeeeeecCCCCeEEEEee
Q psy3710 206 KGTLIRVFDTGSGQKLNELRRG----------------LCVLCPNSNNSLLAFPGR 245 (424)
Q Consensus 206 d~~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 245 (424)
+.. |.+.|.++++.+..+... .+.++++|++..++++|-
T Consensus 200 s~~-I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 200 SSD-VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CSE-EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCe-EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 677 999999999988877632 366899999999988774
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=4e-06 Score=72.52 Aligned_cols=229 Identities=14% Similarity=0.041 Sum_probs=137.2
Q ss_pred ceEEEEECCCCCeeEeecCCe-EEEEeCCcCccccccc-------------------ccCCCeeeEEEeccCceEEEEeC
Q psy3710 12 GLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQD-------------------FTDGGLGHVEMLFRCNYLALVGG 71 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~~l~~~~~ 71 (424)
...+++++++|+++.++..++ |..|+.+..+...... ...+....+.+.++...|.++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 456688999998777776666 9999876543321100 00124567788873444555542
Q ss_pred CcCCCcCCCeEEEEECCCCcEEEEEe--e----cCCeEEEEecC-CceEEEee--------------------ccEEEEe
Q psy3710 72 GTHPKYPNNRVMIWDDLKKQVVICLE--F----NAPVKGVRLRR-DKIVVVLE--------------------GLIKVYT 124 (424)
Q Consensus 72 ~~~~~~~d~~i~iwd~~~~~~~~~~~--~----~~~v~~~~~~~-~~~~~~~~--------------------~~i~v~~ 124 (424)
.+.+..+|..+++. ..+. . ......+++.+ ++.+.+++ +.|..||
T Consensus 100 -------~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 100 -------YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -------TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -------CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 35588888765542 2222 1 13478899999 88666653 4577777
Q ss_pred ecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEE
Q psy3710 125 FIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATA 203 (424)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 203 (424)
.. .++.......... ...++++++++.|.++-...+.|..|++..... ....+....+ ...+++.++|++.++.
T Consensus 172 ~~-~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 172 PS-TKETTLLLKELHV---PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp TT-TTEEEEEEEEESC---CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEE
T ss_pred CC-CCEEEEeccCCcc---CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEe
Confidence 53 3332222222222 235788999987776456778999999875311 1111111223 7889999999876665
Q ss_pred ec----------CCcEEEEEECCCcceeeEEecc-------eeeeeecCCCCeEEEEeecCCeEEEEeCCC
Q psy3710 204 SY----------KGTLIRVFDTGSGQKLNELRRG-------LCVLCPNSNNSLLAFPGRKSGHVHLVDLAD 257 (424)
Q Consensus 204 ~~----------d~~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~ 257 (424)
.. .+. |..+|. .++.+..+..+ ...++. .+..++++...++.|..+++..
T Consensus 247 ~~~~~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 247 SEELDGNMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEETTSSTTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC--
T ss_pred cCcccccccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEeccc
Confidence 44 456 888886 46666666532 222333 3566777677788888888764
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.84 E-value=3.6e-06 Score=67.99 Aligned_cols=177 Identities=18% Similarity=0.131 Sum_probs=123.2
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCe--EEEEecCCceEEEe--eccEEEEeecCCC
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL--EGLIKVYTFIQCP 129 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~--~~~i~v~~~~~~~ 129 (424)
...+.|.. +.|...++.. .+..|+.+|+++++.+..+...... ..+++..+..+.+. ++.+.+||.. +.
T Consensus 23 tqGL~~~~--~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-tl 95 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-TL 95 (243)
T ss_dssp EEEEEEET--TEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TT
T ss_pred cccEEEEC--CEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-cC
Confidence 44566654 4555554431 2469999999999999999865554 44566666677776 8999999996 88
Q ss_pred ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccc--c---CCeEEEEEccCCCEEEEEe
Q psy3710 130 QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAH--E---APLSCIALNQTGTRLATAS 204 (424)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~~~~ 204 (424)
+.+.++....... .++ ++++.|++ +..++.|.++|..+. +....+.-. . ..++.+.+. +|+..+..-
T Consensus 96 ~~~~ti~~~~~Gw---glt--~dg~~L~v-Sdgs~~l~~iDp~t~-~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw 167 (243)
T 3mbr_X 96 TPRARFRYPGEGW---ALT--SDDSHLYM-SDGTAVIRKLDPDTL-QQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW 167 (243)
T ss_dssp EEEEEEECSSCCC---EEE--ECSSCEEE-ECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cEEEEEeCCCCce---EEe--eCCCEEEE-ECCCCeEEEEeCCCC-eEEEEEEEccCCcccccceeeEEe-CCEEEEEEC
Confidence 8888887654332 333 46777776 456889999999886 444444321 1 345566665 666555554
Q ss_pred cCCcEEEEEECCCcceeeEEecc----------------eeeeeecCCCCeEEEEeec
Q psy3710 205 YKGTLIRVFDTGSGQKLNELRRG----------------LCVLCPNSNNSLLAFPGRK 246 (424)
Q Consensus 205 ~d~~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 246 (424)
.+.. |.+.|.++++.+..+... .+.++++|.+..++++|-.
T Consensus 168 ~s~~-I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 168 LTSR-IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTTE-EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCCe-EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5677 999999999988877622 3668999999999987743
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.83 E-value=5.8e-07 Score=73.23 Aligned_cols=187 Identities=9% Similarity=-0.001 Sum_probs=121.8
Q ss_pred ccCCc--eEEEEECCCCCeeEeecCC---eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 8 TYKNG--LLYAGFNQDQGCFACGMED---GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 8 ~h~~~--V~~~~~s~~g~~la~g~~~---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.|... ...+.|+ ++.++.+++.. .|+.+|+++++........ .......+.++++.+..+.. .++.+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw------~~~~v 109 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTW------KNGLG 109 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEES------SSSEE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEe------eCCEE
Confidence 45443 3778888 66555554443 2999999999887665553 34444445566777777764 37999
Q ss_pred EEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCC--C-CeeEEEeecCCCCeEE
Q psy3710 83 MIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPN--P-KGLCVLCPNSNNSLLA 157 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~l~ 157 (424)
.++|.++.+.+.++.....-..++... ..++.+ ++.|.++|.. +.+.+..+..... + ..+..+.+. +|+..+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG~glt~dg-~~L~~SdGs~~i~~iDp~-T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEGWGLTHND-QYLIMSDGTPVLRFLDPE-SLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEEETTTCCEEEEEECSSCCCCEEECS-SCEEECCSSSEEEEECTT-TCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECccCcEEEEEECCCCceEEecCC-CEEEEECCCCeEEEEcCC-CCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 999999999999999655444555432 334444 4568999986 6777777665322 1 123345554 666554
Q ss_pred EeeccCCeEEEEeCCCCCCCCccccc------------ccCCeEEEEEccCCCEEEEEecCC
Q psy3710 158 FPGRKSGHVHLVDLADPERPPLDIAA------------HEAPLSCIALNQTGTRLATASYKG 207 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~d~ 207 (424)
. ...+..|.+.|.+++ +....+.. -..-.+.|+|+|+++.|+..+..=
T Consensus 187 n-~w~~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 187 N-VWQTNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp E-ETTSSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred E-EccCCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 4 667889999999886 43332221 123458999999988887776543
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.78 E-value=2.8e-05 Score=66.87 Aligned_cols=222 Identities=10% Similarity=-0.005 Sum_probs=138.0
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCCc-eEEEe---eccEEEEeecCC---CceeEEEeeCCCCCeeEEEeecC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQC---PQQLHVFETNPNPKGLCVLCPNS 151 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 151 (424)
.+.|+..|+.+.+....+.....+.+++|.+.+ .+..+ .+.|..+++... ......+.... .....+++++
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~ 86 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW 86 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEee
Confidence 467999999887766655556678899999754 44444 578888887521 12222222111 1234566676
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC--CcEEEEEECCCcceeeEE-ec--
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK--GTLIRVFDTGSGQKLNEL-RR-- 226 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~~i~iwd~~~~~~~~~~-~~-- 226 (424)
.+..|..+-...+.|.++++... .....+...-.....+++.|.+..|+.+... +. |...++... ....+ ..
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~-~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~dG~-~~~~~~~~~~ 163 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGV-KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGV-DIYSLVTENI 163 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSS-SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSC-CEEEEECSSC
T ss_pred cCCeEEEEECCCCEEEEEeCCCC-ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCCCC-CeEEEEECCC
Confidence 56666654677889999998753 2222222233567899999976666555443 56 888887543 33332 21
Q ss_pred -ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc
Q psy3710 227 -GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA--AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303 (424)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~ 303 (424)
....++++++++.++++-...+.|..+|+..... ..... ..-.....+++. .+..+++-...+. |..++..+|+
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-V~~~~~~~g~ 240 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGS 240 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCC
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-EEEEeCCCCc
Confidence 2567899999999998788889999999975332 11211 123456778885 3444455555566 8888887777
Q ss_pred eeeee
Q psy3710 304 KLNEL 308 (424)
Q Consensus 304 ~~~~~ 308 (424)
.+..+
T Consensus 241 ~~~~i 245 (316)
T 1ijq_A 241 DVNLL 245 (316)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 65554
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.76 E-value=7.7e-05 Score=65.04 Aligned_cols=234 Identities=6% Similarity=-0.045 Sum_probs=141.9
Q ss_pred CCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
.+..+|.+..++ .+|..+....|+..+++......... .......++|.+..+.|..+... .+.|..+++..
T Consensus 33 ~d~~~C~~~~~~-~~ll~~~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~------~~~I~r~~~~g 104 (349)
T 3v64_C 33 PDRRSCKALGPE-PVLLFANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVT------LDRILRANLNG 104 (349)
T ss_dssp TTSSCEEESSSC-CEEEEECBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTS
T ss_pred CCCCcccccccC-ceeEeecccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEecc------CCceEEEecCC
Confidence 344556666663 45666665668888876544322222 23446788999888888777643 58999999876
Q ss_pred CcEEEEEe-ecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC-
Q psy3710 90 KQVVICLE-FNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS- 163 (424)
Q Consensus 90 ~~~~~~~~-~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d- 163 (424)
+.....+. .......+++.+. +.+..+ .+.|.+.+++ +.....+.. ........++++|.+..|..+-...
T Consensus 105 ~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d--G~~~~~l~~-~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 105 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEEC-TTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC--CCceEEEEe-CCCCCcceEEEecCcCeEEEeccCCC
Confidence 65443333 2345678888864 444444 4678888875 332232221 1223356778888777777645555
Q ss_pred CeEEEEeCCCCCCCCccc-ccccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEec---ceeeeeecCCCC
Q psy3710 164 GHVHLVDLADPERPPLDI-AAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNS 238 (424)
Q Consensus 164 g~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~ 238 (424)
+.|..++++.. ....+ ...-.....++++|++..|+.+.. .+. |..+|+........+.. +...+++ .+.
T Consensus 182 ~~I~r~~~dG~--~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~~~~~~~~~~~~~P~giav--~~~ 256 (349)
T 3v64_C 182 PRIEASSMDGS--GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQGLPHPFAITV--FED 256 (349)
T ss_dssp CEEEEEETTSC--SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECSSCSSEEEEEE--ETT
T ss_pred CEEEEEeCCCC--CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCCceEEEEeCCCCCceEEEE--ECC
Confidence 78999888753 22222 223345689999987777666654 456 99999865433222221 2344555 345
Q ss_pred eEEEEeecCCeEEEEeCCCCC
Q psy3710 239 LLAFPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 239 ~~~~~~~~dg~i~i~d~~~~~ 259 (424)
.++++-...+.|..++..+++
T Consensus 257 ~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 257 SLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCCeEEEEEccCCC
Confidence 666666677888888765544
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.76 E-value=4.9e-05 Score=67.32 Aligned_cols=231 Identities=6% Similarity=-0.048 Sum_probs=140.3
Q ss_pred eEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE
Q psy3710 13 LLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV 92 (424)
Q Consensus 13 V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~ 92 (424)
-+|.+..+ ..+|..+....|+..+++......... .......++|.+..+.|..+... .+.|..++...+..
T Consensus 79 ~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNV 150 (386)
T ss_dssp SCEEECSS-CCEEEEECBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCE
T ss_pred CeECCccc-cceeEeecCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCc
Confidence 34555555 345666666668888887654432222 23456778999888888777643 58999999876654
Q ss_pred EEEEe-ecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC-CeE
Q psy3710 93 VICLE-FNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS-GHV 166 (424)
Q Consensus 93 ~~~~~-~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d-g~i 166 (424)
...+. .......+++.+. +.+..+ .+.|.+.++. +.....+.. ........++++|.+..|+.+-... +.|
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d--g~~~~~l~~-~~l~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT--SCSCEEEEC-SSCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC--CCceEEeec-CCCCCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 44333 2335567888864 444444 4578887774 322222222 1123356778888777777644444 788
Q ss_pred EEEeCCCCCCCCccc-ccccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEec---ceeeeeecCCCCeEE
Q psy3710 167 HLVDLADPERPPLDI-AAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNSLLA 241 (424)
Q Consensus 167 ~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 241 (424)
..++++.. ....+ ...-.....|+++|++..|+.+.. .+. |..+|+........+.. +...+++ ++..++
T Consensus 228 ~r~~~dG~--~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~P~giav--~~~~ly 302 (386)
T 3v65_B 228 EASSMDGS--GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQGLPHPFAITV--FEDSLY 302 (386)
T ss_dssp EEEETTSC--SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSCSCEEEECSSCSSEEEEEE--ETTEEE
T ss_pred EEEeCCCC--CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCCeeEEEEECCCCCceEEEE--ECCEEE
Confidence 88888753 22222 223345689999987776666554 455 99999865433222221 2344555 445677
Q ss_pred EEeecCCeEEEEeCCCCC
Q psy3710 242 FPGRKSGHVHLVDLADPE 259 (424)
Q Consensus 242 ~~~~~dg~i~i~d~~~~~ 259 (424)
++....+.|..+|..+++
T Consensus 303 ~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 303 WTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EeeCCCCeEEEEECCCCc
Confidence 767778888888865554
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.75 E-value=3.5e-05 Score=67.23 Aligned_cols=223 Identities=10% Similarity=-0.016 Sum_probs=137.6
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNS 154 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (424)
.+.|+..++........+.....+.+++|.+. +.+..+ .+.|..+++. .......+.... .....+++.+.+.
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~--~~p~glavd~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGL--ESPGGLAVDWVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSC--SCCCEEEEETTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecC-CCCceEEEeCCC--CCccEEEEecCCC
Confidence 36788888876665554444566889999864 444444 5778888875 322222222111 1233566776666
Q ss_pred eEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe-cC-CcEEEEEECCCcceeeEEec---cee
Q psy3710 155 LLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS-YK-GTLIRVFDTGSGQKLNELRR---GLC 229 (424)
Q Consensus 155 ~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~~i~iwd~~~~~~~~~~~~---~~~ 229 (424)
.|..+-...+.|.+.+++.. .....+...-.....++++|.+..|+... .. +. |...++........... ...
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~dG~~~~~~~~~~~~~Pn 206 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGA-HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSGRRIIADTHLFWPN 206 (349)
T ss_dssp EEEEEETTTTEEEEEETTSC-SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEESCCSSCSCEE
T ss_pred eEEEEcCCCCeEEEEcCCCC-ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCCCCCcEEEEECCCCCcc
Confidence 66654667789999998763 22222223335678999999666555544 34 66 88888864432222222 256
Q ss_pred eeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec
Q psy3710 230 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 309 (424)
.++++++++.+.++-...+.|..+|+..... ...+.........+++. .+..+.+-...+. |..++..+|+.+..+.
T Consensus 207 Gla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~-V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 207 GLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKS-INSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCSCEEEE
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCCCCCceEEEEE-CCEEEEecCCCCe-EEEEEccCCCccEEec
Confidence 7899999999998888889999999875332 22232334566778883 3444444444555 8888866676655543
No 266
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.75 E-value=2.2e-06 Score=69.77 Aligned_cols=179 Identities=15% Similarity=0.026 Sum_probs=118.7
Q ss_pred eEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 13 LLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 13 V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
...+.|+. +.++.+.+.++ |+++|+++++..... . ..........+.++.+..+.. .++.+.++|.++.+
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw------~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTW------TEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEES------SSCEEEEEETTTTE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEc------cCCEEEEEECCcCc
Confidence 36788873 44445555555 999999999987666 4 334444445667777776664 37999999999999
Q ss_pred EEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCe---eEEEeecCCCCeEEEeeccCCeE
Q psy3710 92 VVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKG---LCVLCPNSNNSLLAFPGRKSGHV 166 (424)
Q Consensus 92 ~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~dg~i 166 (424)
.+.++.....-..++.... .++.+ ++.|.++|.. +.+.+..+.....+.. +..+.+. +|+..+. ...+..|
T Consensus 128 ~~~ti~~~~eGwGLt~Dg~-~L~vSdGs~~l~~iDp~-T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan-vw~s~~I 203 (268)
T 3nok_A 128 RERTTRYSGEGWGLCYWNG-KLVRSDGGTMLTFHEPD-GFALVGAVQVKLRGQPVELINELECA-NGVIYAN-IWHSSDV 203 (268)
T ss_dssp EEEEEECSSCCCCEEEETT-EEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ETTCSEE
T ss_pred EEEEEeCCCceeEEecCCC-EEEEECCCCEEEEEcCC-CCeEEEEEEeCCCCcccccccccEEe-CCEEEEE-ECCCCeE
Confidence 9999996555556665433 34444 6789999986 6777777665433222 3445555 6655544 5678899
Q ss_pred EEEeCCCCCCCCccccc-------------ccCCeEEEEEccCCCEEEEEec
Q psy3710 167 HLVDLADPERPPLDIAA-------------HEAPLSCIALNQTGTRLATASY 205 (424)
Q Consensus 167 ~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~ 205 (424)
.+.|.+++ +....+.. -.+-.+.|+++|+++.|+..+.
T Consensus 204 ~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 204 LEIDPATG-TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEECTTTC-BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEeCCCC-cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 99999887 43333221 1235689999998776666554
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.73 E-value=3e-05 Score=68.65 Aligned_cols=222 Identities=9% Similarity=-0.007 Sum_probs=138.9
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNS 154 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (424)
...|+..++..+.....+.....+.+++|.+. +.++.+ .+.|..+++. .......+.... .....+++++.+.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~--~~p~glavd~~~g 171 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGL--ESPGGLAVDWVHD 171 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCEEEEECSSC--SCCCCEEEETTTT
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecC-CCCcEEEEeCCC--CCccEEEEEeCCC
Confidence 46788888877665555555567889999964 444444 5788888875 332222222111 1123456676666
Q ss_pred eEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec-C-CcEEEEEECCCcceeeEEecc---ee
Q psy3710 155 LLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-K-GTLIRVFDTGSGQKLNELRRG---LC 229 (424)
Q Consensus 155 ~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~~i~iwd~~~~~~~~~~~~~---~~ 229 (424)
.|+.+-...+.|.+.+++.. .....+...-.....+++.|.+..|+.... . +. |...++............ ..
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~-~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~~~~~~~~~~~~Pn 249 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGA-HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSGRRIIADTHLFWPN 249 (386)
T ss_dssp EEEEEETTTTEEEECBTTSC-SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEEEECSSCSCEE
T ss_pred eEEEEcCCCCeEEEEeCCCC-ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE-EEEEeCCCCCcEEEEECCCCCee
Confidence 66664667788999888753 222223333356789999997766665543 3 56 888888654333322222 56
Q ss_pred eeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 230 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
.++++++++.++++-...+.|..+|+..... ...+.........+++. .+..+.+....+. |..++..+|+.+..+
T Consensus 250 Glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~-V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKS-INSANKFTGKNQEII 325 (386)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCSCEEE
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECCCCCceEEEEE-CCEEEEeeCCCCe-EEEEECCCCcceEEE
Confidence 7899999999988888889999999875332 22233334566788883 3444455455566 888887677665554
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.73 E-value=2e-05 Score=67.50 Aligned_cols=223 Identities=10% Similarity=0.024 Sum_probs=129.0
Q ss_pred CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEee---cc--EEEEeecC
Q psy3710 53 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLE---GL--IKVYTFIQ 127 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~--i~v~~~~~ 127 (424)
....+++.++++.+++-. .++.|..||... +....+.....+..+++.+++.+++++ .. |..++..
T Consensus 33 ~pegia~~~~g~lyv~d~-------~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~- 103 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNH-------EVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS- 103 (306)
T ss_dssp CEEEEEECTTSCEEEEET-------TTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT-
T ss_pred CcceEEECCCCCEEEEeC-------CCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC-
Confidence 456688888877444432 358999999764 455555556778999999998766663 13 5555653
Q ss_pred CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc---------ccccccCCeEEEEEccCCC
Q psy3710 128 CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL---------DIAAHEAPLSCIALNQTGT 198 (424)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~ 198 (424)
+++....... ........++..+++..+++ ...++.|..+|...+...+. .....-.....+ +|+++
T Consensus 104 ~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~-d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 104 DGTVETLLTL-PDAIFLNGITPLSDTQYLTA-DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp TSCEEEEEEC-TTCSCEEEEEESSSSEEEEE-ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred CCeEEEEEeC-CCccccCcccccCCCcEEEE-ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 4443322222 11111223333444444443 55688999998764210110 000111234455 78887
Q ss_pred EEEEEe-cCCcEEEEEECCC-cce--eeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCC-CeeeccCCCC
Q psy3710 199 RLATAS-YKGTLIRVFDTGS-GQK--LNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERP-PLDIAAHEAP 271 (424)
Q Consensus 199 ~l~~~~-~d~~~i~iwd~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~ 271 (424)
.|+.+. ..+. |..+++.. ++. ...+. .....+++++++. ++++....+.|.++|.. ++.. ...+...-..
T Consensus 180 ~lyv~d~~~~~-I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~ 256 (306)
T 2p4o_A 180 FLYVSNTEKML-LLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN-LYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIG 256 (306)
T ss_dssp EEEEEETTTTE-EEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-EEEECBTTCCEEEECTT-CCEEEEECGGGTCTT
T ss_pred EEEEEeCCCCE-EEEEEeCCCCCCCccEEEeccCCCCCeEECCCCC-EEEEeCCCCeEEEECCC-CCEEEEeecccccCC
Confidence 766655 4566 99999864 321 11121 2345678888885 45556677899999975 3211 1122233356
Q ss_pred eEEEEEc---CCCCEEEEEeCCC
Q psy3710 272 LSCIALN---QTGTRLATASYKG 291 (424)
Q Consensus 272 v~~~~~~---~~~~~l~~~~~d~ 291 (424)
.++++|. |+++.|+.++..+
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEECTT
T ss_pred ceEEEEecccCCCCEEEEECCCC
Confidence 8999998 8887777766544
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.68 E-value=8.6e-06 Score=65.78 Aligned_cols=186 Identities=12% Similarity=0.013 Sum_probs=120.8
Q ss_pred ccCC--ceEEEEECCCCCeeEeecCC---eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeE
Q psy3710 8 TYKN--GLLYAGFNQDQGCFACGMED---GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 8 ~h~~--~V~~~~~s~~g~~la~g~~~---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i 82 (424)
.|+. ....+.|++ +.++.+.+.. .|+.+|+++++........ .......+.+.++.+..+.. .++.+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw------~~~~v 87 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTW------RNHEG 87 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEES------SSSEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEe------eCCEE
Confidence 4553 456889987 4444444443 3999999999887666553 33334445556777766664 37999
Q ss_pred EEEECCCCcEEEEEeecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCC---eeEEEeecCCCCeEE
Q psy3710 83 MIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPK---GLCVLCPNSNNSLLA 157 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 157 (424)
.++|.++.+.+.++.....-..++... +.++.+ ++.|.++|.. +.+.+..++...++. .+..+.+. +|+..+
T Consensus 88 ~v~D~~tl~~~~ti~~~~~Gwglt~dg-~~L~vSdgs~~l~~iDp~-t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEGWALTSDD-SHLYMSDGTAVIRKLDPD-TLQQVGSIKVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEECS-SCEEEECSSSEEEEECTT-TCCEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECCcCcEEEEEeCCCCceEEeeCC-CEEEEECCCCeEEEEeCC-CCeEEEEEEEccCCcccccceeeEEe-CCEEEE
Confidence 999999999999999765556666433 344445 5689999986 677777766543221 13344444 565554
Q ss_pred EeeccCCeEEEEeCCCCCCCCcccc-------------cccCCeEEEEEccCCCEEEEEecC
Q psy3710 158 FPGRKSGHVHLVDLADPERPPLDIA-------------AHEAPLSCIALNQTGTRLATASYK 206 (424)
Q Consensus 158 ~~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~~~d 206 (424)
. ...+..|.+.|..++ +....+. .-.+-.+.|+++|+++.|...+..
T Consensus 165 n-vw~s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 165 N-VWLTSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp E-ETTTTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred E-ECCCCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 4 556779999999886 3333222 112356899999988777766644
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.68 E-value=1.8e-05 Score=76.74 Aligned_cols=244 Identities=10% Similarity=0.010 Sum_probs=132.4
Q ss_pred ccCC-ceEEEEEC-CCCCeeEeecC-----Ce-EEEEeCCcC-cccccccccCCCeeeEEEeccCceEEEEeCCcCCCcC
Q psy3710 8 TYKN-GLLYAGFN-QDQGCFACGME-----DG-FRIYNCDPL-KEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 8 ~h~~-~V~~~~~s-~~g~~la~g~~-----~~-i~iw~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 78 (424)
+|.- .+...+|| |||++||.+.+ .. |+++|++++ +.+.. .. ......+.|+|+++.++++..... ..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~-~~~~~~~~WspDg~~l~y~~~d~~--~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV-SGTNGEIVWGPDHTSLFYVTKDET--LR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE-EEECSCCEECSSTTEEEEEEECTT--CC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc-cCceeeEEEecCCCEEEEEEECCC--CC
Confidence 3443 67889999 99999994422 22 999999988 63221 11 122456899999999988873210 00
Q ss_pred CCeEEEEECCCCcE--EEEEe--ecCCeEEEEecCCceEEEe------eccEEEEeecCCCcee--EEEeeCCCCCeeEE
Q psy3710 79 NNRVMIWDDLKKQV--VICLE--FNAPVKGVRLRRDKIVVVL------EGLIKVYTFIQCPQQL--HVFETNPNPKGLCV 146 (424)
Q Consensus 79 d~~i~iwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~------~~~i~v~~~~~~~~~~--~~~~~~~~~~~~~~ 146 (424)
...|+++++.++.. ...+. .......+.|+||+..++. ...|.++|+....... ..+.... ......
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~s 324 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPRE-KGVRYD 324 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCC-TTCCEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCC-CCceEE
Confidence 14788899877642 22222 2344667899999977664 3468888885321122 3332211 111233
Q ss_pred EeecCCCCeEEEeeccC----CeEEEEeCCCCCCCCcc-cccccC--CeEEEEEccCCCEEEEEecCCc-EEEEEEC---
Q psy3710 147 LCPNSNNSLLAFPGRKS----GHVHLVDLADPERPPLD-IAAHEA--PLSCIALNQTGTRLATASYKGT-LIRVFDT--- 215 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~d----g~i~i~d~~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~~d~~-~i~iwd~--- 215 (424)
+.|+. +..|+.....+ ..|..+++.+. ..... +..+.. .+..+.+. .+..+++...++. .|.++++
T Consensus 325 ~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~ 401 (751)
T 2xe4_A 325 VQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQ 401 (751)
T ss_dssp EEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTT
T ss_pred Eeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccc
Confidence 33333 55555434443 36777777642 12223 333433 34455554 2334455556664 1556665
Q ss_pred ----CCcceeeEE--ecceeeeee------cCCCCeEEEEeecC---CeEEEEeCCCCC
Q psy3710 216 ----GSGQKLNEL--RRGLCVLCP------NSNNSLLAFPGRKS---GHVHLVDLADPE 259 (424)
Q Consensus 216 ----~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~d---g~i~i~d~~~~~ 259 (424)
.+++....+ ........+ .+++..++++.+.. ..++.+|+.+++
T Consensus 402 ~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 402 DGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 343313333 222222233 44666666655443 467788877654
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.65 E-value=0.00013 Score=64.81 Aligned_cols=225 Identities=9% Similarity=-0.017 Sum_probs=141.1
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCCC--ceeEEEeeCCCCCeeEEEeecCC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCP--QQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
...|+..++........+.....+.+++|++. +.+..+ .+.|+.+++.... .....+.. ........+++.+.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~ 169 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWI 169 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETT
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEec
Confidence 47899999887766655556678899999974 444444 5678888875211 11222221 11233556777775
Q ss_pred CCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeEEec---c
Q psy3710 153 NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNELRR---G 227 (424)
Q Consensus 153 ~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~~~~---~ 227 (424)
+..|+.+-...+.|.+.+++.. .....+...-.....|++.|.+..|+.... .+. |...++........... .
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~-~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~-I~~~~~dG~~~~~~~~~~l~~ 247 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGV-KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGVDIYSLVTENIQW 247 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTC-SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCC-EEEEETTSCSCEEEECSSCSC
T ss_pred CCceEEEECCCCeEEEEeCCCC-ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCE-EEEEeCCCCccEEEEECCCCc
Confidence 6666664677889999998863 222223333445789999997666665542 367 89999865443333332 2
Q ss_pred eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCcee
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 305 (424)
...+++++.++.++++-...+.|..+|+..... ...... .-.....+++. .+..+.+-...+. |..+|..+|+.+
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~ 324 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDV 324 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCC
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCce
Confidence 577899999999988777889999999876432 222221 23445677773 3344455555566 888887777766
Q ss_pred eeec
Q psy3710 306 NELR 309 (424)
Q Consensus 306 ~~~~ 309 (424)
..+.
T Consensus 325 ~~i~ 328 (400)
T 3p5b_L 325 NLLA 328 (400)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5553
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.64 E-value=3.4e-05 Score=66.57 Aligned_cols=199 Identities=15% Similarity=0.063 Sum_probs=121.8
Q ss_pred CeEEEEecCCce-EEEe--eccEEEEeecCCCceeEEEeeCCC------------------CCeeEEEeecC-CCCeEEE
Q psy3710 101 PVKGVRLRRDKI-VVVL--EGLIKVYTFIQCPQQLHVFETNPN------------------PKGLCVLCPNS-NNSLLAF 158 (424)
Q Consensus 101 ~v~~~~~~~~~~-~~~~--~~~i~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~-~~~~l~~ 158 (424)
...++++.+++. +.+. ++.|..|+.. .. .+..+..... ......+++.+ ++++++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v- 96 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGP-NS-GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI- 96 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCT-TT-CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCC-CC-ceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-
Confidence 467788888875 4443 6788888864 32 2333321110 01356778887 555444
Q ss_pred eeccCCeEEEEeCCCCCCCCccccc-----ccCCeEEEEEcc-CCCEEEEEec-----------------CCcEEEEEEC
Q psy3710 159 PGRKSGHVHLVDLADPERPPLDIAA-----HEAPLSCIALNQ-TGTRLATASY-----------------KGTLIRVFDT 215 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~~i~iwd~ 215 (424)
+...+.|..+|..++ . ...+.. .......+++.+ +|+..++-.. ++. |..+|.
T Consensus 97 -~d~~~~i~~~d~~~g-~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~-v~~~d~ 172 (322)
T 2fp8_A 97 -VDCYYHLSVVGSEGG-H-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGR-LIKYDP 172 (322)
T ss_dssp -EETTTEEEEECTTCE-E-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEE-EEEEET
T ss_pred -EECCCCEEEEeCCCC-E-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCce-EEEEeC
Confidence 444455888887653 1 222211 123468899999 8977666432 366 888998
Q ss_pred CCcceeeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC-CCeeeccCCCCeEEEEEcCCCCEEEEEeC---
Q psy3710 216 GSGQKLNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASY--- 289 (424)
Q Consensus 216 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 289 (424)
.+++...... .....+++++++..++++-...+.|+.|++..... ....+....+ ...++++++|++.++...
T Consensus 173 ~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 173 STKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETT
T ss_pred CCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccc
Confidence 7665432222 23456889999998888777789999999885321 1112211223 788999999987666544
Q ss_pred -------CCcEEEEEECCCCceeeeec
Q psy3710 290 -------KGTLIRVFDTGSGQKLNELR 309 (424)
Q Consensus 290 -------d~~~i~iwd~~~~~~~~~~~ 309 (424)
.+. |..+|.. ++.+..+.
T Consensus 252 ~~~~~~~~~~-v~~~d~~-G~~~~~~~ 276 (322)
T 2fp8_A 252 GNMHGRVDPK-GIKFDEF-GNILEVIP 276 (322)
T ss_dssp SSTTSCEEEE-EEEECTT-SCEEEEEE
T ss_pred ccccCCCccE-EEEECCC-CCEEEEEE
Confidence 355 7777764 66555543
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.62 E-value=8.1e-05 Score=63.68 Aligned_cols=221 Identities=10% Similarity=0.076 Sum_probs=129.7
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
.....++|+++|+++++...++ |..||.+.... ..... .+....+++.++++.+++..+. ....|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-~~~~~-~~~p~gia~~~dG~l~vad~~~-----~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-IHATV-EGKVSGLAFTSNGDLVATGWNA-----DSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-EEEEC-SSEEEEEEECTTSCEEEEEECT-----TSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-EEEeC-CCCceeEEEcCCCcEEEEeccC-----CcceEEEEcCCC
Confidence 4567899999998777765555 99998765322 21222 3457788999998855544321 013577778778
Q ss_pred CcEEEEEee--cCCeEEEEecCCceEEEe---eccEEEEeecCCCc-eeEEEee-------CCCCCeeEEEeecCCCCeE
Q psy3710 90 KQVVICLEF--NAPVKGVRLRRDKIVVVL---EGLIKVYTFIQCPQ-QLHVFET-------NPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 90 ~~~~~~~~~--~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~l 156 (424)
++....... ......++..+++..+++ .+.|.++|.. ..+ .+..... .........+ +++++.|
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~-~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV-QPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT-TTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC-CCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 876543332 223345555566655555 4677777753 221 1111110 0111123334 6788877
Q ss_pred EEeeccCCeEEEEeCCCCCCC--CcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceee--EEec---cee
Q psy3710 157 AFPGRKSGHVHLVDLADPERP--PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN--ELRR---GLC 229 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~--~~~~---~~~ 229 (424)
.++-...+.|..+++...... ...+. .......+++.++|+++++....+. |.++|.. ++... .+.. ...
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQGVIGST 258 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGGTCTTEE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeecccccCCce
Confidence 775777889999998752111 11111 1134577899999987777666778 9999975 55422 2222 245
Q ss_pred eeeec---CCCCeEEEEe
Q psy3710 230 VLCPN---SNNSLLAFPG 244 (424)
Q Consensus 230 ~~~~~---~~~~~~~~~~ 244 (424)
.+++. +++..++++.
T Consensus 259 ~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 259 AVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEEECCSTTTTTEEEEEE
T ss_pred EEEEecccCCCCEEEEEC
Confidence 66776 6666666644
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.60 E-value=0.00015 Score=62.20 Aligned_cols=223 Identities=12% Similarity=0.057 Sum_probs=136.5
Q ss_pred CCeEEEEECCCCc--EEEEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC
Q psy3710 79 NNRVMIWDDLKKQ--VVICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 79 d~~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
...|+..++.... ....+.....+.+++|.+. +.+..+ .+.|..+++.........+.... .....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcC
Confidence 4789999987663 2223333445778899875 444444 56888888753221122222211 11334566665
Q ss_pred CCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeEEecc---
Q psy3710 153 NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNELRRG--- 227 (424)
Q Consensus 153 ~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~~~~~--- 227 (424)
+..|+.+-...+.|.+++++.. ...............+++.|.+..|+.+.. .+. |...++............
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK-IERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCE-EEEEETTSCSCEEEECSSCSC
T ss_pred CCeEEEEECCCCEEEEEECCCC-cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCE-EEEEEcCCCCeEEEEECCCCC
Confidence 6666654667789999998763 222222233456789999997666665552 466 888888643322222222
Q ss_pred eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeee
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE 307 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~ 307 (424)
...++++++++.+.++-...+.|..+|+..... .............+++..+ ..+.+-...+. |..++..+|+....
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~~-~lywtd~~~~~-V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFED-ILYWTDWSTHS-ILACNKYTGEGLRE 244 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEETT-EEEEEETTTTE-EEEEETTTCCSCEE
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEeCC-EEEEEecCCCe-EEEEECCCCCceEE
Confidence 567899999999998888889999999875332 2222234455677887533 34444445566 88888877776554
Q ss_pred e
Q psy3710 308 L 308 (424)
Q Consensus 308 ~ 308 (424)
+
T Consensus 245 i 245 (318)
T 3sov_A 245 I 245 (318)
T ss_dssp E
T ss_pred E
Confidence 4
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.55 E-value=1.7e-05 Score=75.66 Aligned_cols=255 Identities=12% Similarity=0.039 Sum_probs=136.7
Q ss_pred eEEEEecC-CceEEEee--------------ccEEEEeecCCCc--eeEEEeeCCCCCeeEEEeecCCCCeEEEeec-cC
Q psy3710 102 VKGVRLRR-DKIVVVLE--------------GLIKVYTFIQCPQ--QLHVFETNPNPKGLCVLCPNSNNSLLAFPGR-KS 163 (424)
Q Consensus 102 v~~~~~~~-~~~~~~~~--------------~~i~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~d 163 (424)
-...++.+ ++.+++.. ..+.+||.. +.+ .+..+.... .....+.++..+++.+++ |+ .+
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~~~~~~~~~-~~~~~~~~~~~~g~lyv~-GG~~~ 264 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSDRTVTVTKH-DMFCPGISMDGNGQIVVT-GGNDA 264 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCCCEEEECSC-CCSSCEEEECTTSCEEEE-CSSST
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEeCcccCCCC-CCccccccCCCCCCEEEe-CCCCC
Confidence 34566666 66655541 157888875 332 222222211 112234556678888888 66 56
Q ss_pred CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEe-cC-----CcEEEEEECCCcceeeE-------Eeccee
Q psy3710 164 GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATAS-YK-----GTLIRVFDTGSGQKLNE-------LRRGLC 229 (424)
Q Consensus 164 g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~~i~iwd~~~~~~~~~-------~~~~~~ 229 (424)
..+.+||..+..- ....+.. ...-.+++..++++.++.|+ .+ .. +.+||..+++-... +.....
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~-~e~yd~~t~~W~~~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKN-GEVYSPSSKTWTSLPNAKVNPMLTADK 342 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCC-EEEEETTTTEEEEETTSCSGGGCCCCT
T ss_pred CceEEecCcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCccccc-ceEeCCCCCcceeCCCccccccccccc
Confidence 6899999876410 0011111 11123556667899999988 33 46 89999987653321 000001
Q ss_pred eeeecCCCCeEEEEeecC---------CeEEEEeCCCCCCCCeeeccC---------CCCeEEEEEcC-CCCEEEEEeCC
Q psy3710 230 VLCPNSNNSLLAFPGRKS---------GHVHLVDLADPERPPLDIAAH---------EAPLSCIALNQ-TGTRLATASYK 290 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~d---------g~i~i~d~~~~~~~~~~~~~~---------~~~v~~~~~~~-~~~~l~~~~~d 290 (424)
...+..++..+++ |+.+ ..+..||..+.... .....+ ...-.++.|.. ++++++.|+.+
T Consensus 343 ~~~~~~~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~~w~-~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 343 QGLYRSDNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGSGDV-KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp TGGGTTTCSCCEE-ECGGGCEEECCSSSEEEEEECSTTCEE-EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred cceeecCCceEEE-ECCCCcEEEecCccceeeeecCCccee-ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 1122234444444 5443 45678888765421 111111 11224445543 77888888754
Q ss_pred C-----------cEEEEEECCCCceeee---------------eccCCcEEEEEeCC-----------CcEEEEEccccc
Q psy3710 291 G-----------TLIRVFDTGSGQKLNE---------------LRRDSSYLCVSSDH-----------GTVHVFSVDEAQ 333 (424)
Q Consensus 291 ~-----------~~i~iwd~~~~~~~~~---------------~~~~~~~l~~~~~d-----------~~i~iw~~~~~~ 333 (424)
+ . |.+||..+.+.... .-+++++++.|+.+ ..+.+||..+.+
T Consensus 421 ~~~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 421 DYQDSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSSSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 2 4 78888876543221 22578888888754 457788876643
Q ss_pred cccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec
Q psy3710 334 KINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA 384 (424)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 384 (424)
-. .... ...+......+.+.||++.+++|+.
T Consensus 500 W~-~~~~-------------------~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 500 FY-KQNP-------------------NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EE-ECCC-------------------CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ee-ecCC-------------------CCCccccccHhhcCCCcEEEecCCC
Confidence 21 1110 0011122334556789999999885
No 276
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.53 E-value=0.0012 Score=66.53 Aligned_cols=351 Identities=9% Similarity=0.095 Sum_probs=175.7
Q ss_pred CeEEEEeCCcCcccccccccC-CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEE--EEEeecCCeEEEEe
Q psy3710 31 DGFRIYNCDPLKEKERQDFTD-GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVV--ICLEFNAPVKGVRL 107 (424)
Q Consensus 31 ~~i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~--~~~~~~~~v~~~~~ 107 (424)
.+|++.+.+....+.....+. ..|...+ -.+..++++. .+.+.++++..++.. .....+..|.|+++
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As--~n~~~vvva~--------g~~l~~fel~~~~L~~~~~~~l~~evscl~i 561 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVAS--CNSSQVVVAV--------GRALYYLQIHPQELRQISHTEMEHEVACLDI 561 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEE--ECSSEEEEEE--------TTEEEEEEEETTEEEEEEEEECSSCEEEEEC
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEE--eCCCEEEEEE--------CCEEEEEEeeCCceeeecccCCCCceEEEEe
Confidence 345666654433332222222 2343333 3345666665 257778877655432 23335789999999
Q ss_pred cCCc--------eEEEe--eccEEEEeecCCCceeEEEeeCC--CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCC
Q psy3710 108 RRDK--------IVVVL--EGLIKVYTFIQCPQQLHVFETNP--NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE 175 (424)
Q Consensus 108 ~~~~--------~~~~~--~~~i~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~ 175 (424)
.|.. ..++. |++++|+++. ..+.+....... .+..+.-..+ ....+|.+ |-.||.+.-+.++...
T Consensus 562 ~~~~~~~~~s~~~aVg~~~d~tv~I~sL~-~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~i-gl~dG~l~~~~~d~~t 638 (1158)
T 3ei3_A 562 TPLGDSNGLSPLCAIGLWTDISARILKLP-SFELLHKEMLGGEIIPRSILMTTF-ESSHYLLC-ALGDGALFYFGLNIET 638 (1158)
T ss_dssp CCCSSSTTCCSEEEEEETTTTEEEEEETT-TCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEE-EETTSEEEEEEECTTT
T ss_pred ecCCCCcccccEEEEEECCCCEEEEEECC-CCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEE-EeCCCeEEEEEEcCCC
Confidence 7531 23333 8899999996 555554433321 2223333333 23456666 9999998777655321
Q ss_pred CCCc----ccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeE-Eec-ce-eeeeecCC--CCeEEEEeec
Q psy3710 176 RPPL----DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNE-LRR-GL-CVLCPNSN--NSLLAFPGRK 246 (424)
Q Consensus 176 ~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~-~~~-~~-~~~~~~~~--~~~~~~~~~~ 246 (424)
..+. .+-+ ..++.-..+...|..-+.+..+.. ..++--+ ++.... +.. .+ ....|+.. ...++ +..
T Consensus 639 g~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp-~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v--~~~ 713 (1158)
T 3ei3_A 639 GLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRP-TVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLA--LAN 713 (1158)
T ss_dssp CCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSC-EEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEE--EEC
T ss_pred CccccceeEEcC-CCceEEEEEeeCCceeEEEECCCC-EEEEEcC-CceEEeccChHHhceEeccCcccCCCcEE--EEc
Confidence 1111 1112 345544444444443333333444 4444433 322211 111 12 12223222 22333 234
Q ss_pred CCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCC------------------------------------
Q psy3710 247 SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK------------------------------------ 290 (424)
Q Consensus 247 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------------------------ 290 (424)
++.++|..+..........-.-...+..++++|+.+.++.+..+
T Consensus 714 ~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1158)
T 3ei3_A 714 NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSST 793 (1158)
T ss_dssp SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----
T ss_pred CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence 55688888765432111111334567888888876654443211
Q ss_pred -------------CcEEEEEECCCCceeeeec----------------c-CCcEEEEEe----------CCCcEEEEEcc
Q psy3710 291 -------------GTLIRVFDTGSGQKLNELR----------------R-DSSYLCVSS----------DHGTVHVFSVD 330 (424)
Q Consensus 291 -------------~~~i~iwd~~~~~~~~~~~----------------~-~~~~l~~~~----------~d~~i~iw~~~ 330 (424)
+. |++.|..+.+.+..+. . ...+++.|+ ..|.|++|++.
T Consensus 794 ~~~~~~~g~~~~~s~-i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 794 APHETSFGEEVEVHN-LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS 872 (1158)
T ss_dssp ------CCCEEEEEE-EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred cCchhhcCCceeeEE-EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence 12 7788887777655432 1 246777776 24778888886
Q ss_pred ccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceeee--eehh--
Q psy3710 331 EAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRD--VYIQ-- 406 (424)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~--~~~~-- 406 (424)
.+ ++.. +++... .++++.++-- +| +|++|- ...|++|++.....+... .+..
T Consensus 873 ~~-kL~l-------------------v~~~~v-~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~ 928 (1158)
T 3ei3_A 873 DG-KLQT-------------------VAEKEV-KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIM 928 (1158)
T ss_dssp TT-EEEE-------------------EEEEEE-SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSC
T ss_pred CC-EEEE-------------------EEEEEc-CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEE
Confidence 32 1111 111222 3444443321 45 555443 579999999855433311 1211
Q ss_pred hheecCCCceeeEEEeeC
Q psy3710 407 FLEMTNDSNLLSCIEILE 424 (424)
Q Consensus 407 ~~~~~~d~~~l~~~~~~~ 424 (424)
.+.+...+++++.+|+.|
T Consensus 929 ~~~l~~~~~~I~vgD~~~ 946 (1158)
T 3ei3_A 929 ALYLKTKGDFILVGDLMR 946 (1158)
T ss_dssp EEEEEEETTEEEEEESSB
T ss_pred EEEEeccCCEEEEEEhhh
Confidence 124445688899888653
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.52 E-value=0.00029 Score=60.40 Aligned_cols=219 Identities=8% Similarity=0.038 Sum_probs=130.6
Q ss_pred eEEEe-eccEEEEeecCCC-ceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeE
Q psy3710 112 IVVVL-EGLIKVYTFIQCP-QQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLS 189 (424)
Q Consensus 112 ~~~~~-~~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 189 (424)
.++++ ...|+.+++.... .....+... ....++.|++.+..|..+-...+.|..+++.........+...-....
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~---~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGL---EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEE---EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCC---CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 34444 6789999986332 111222211 235678888876667664677889999998865222222222234567
Q ss_pred EEEEccCCCEEE-EEecCCcEEEEEECCCcceeeEEec---ceeeeeecCCCCeEEEEee-cCCeEEEEeCCCCCCCCee
Q psy3710 190 CIALNQTGTRLA-TASYKGTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNSLLAFPGR-KSGHVHLVDLADPERPPLD 264 (424)
Q Consensus 190 ~~~~~~~~~~l~-~~~~d~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~ 264 (424)
.+++.+.+..|+ +-...+. |.++++........+.. ....+++.|.+..++++-. ..+.|..+++..... ...
T Consensus 83 glavd~~~g~ly~~d~~~~~-I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~ 160 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNR-IEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FII 160 (318)
T ss_dssp EEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEE
T ss_pred EEEEEcCCCeEEEEECCCCE-EEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEE
Confidence 899987555554 4445667 99999865433222222 2567888888888877553 368899998875332 122
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec-----c------CCcEEEEEeCCCcEEEEEccccc
Q psy3710 265 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-----R------DSSYLCVSSDHGTVHVFSVDEAQ 333 (424)
Q Consensus 265 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-----~------~~~~l~~~~~d~~i~iw~~~~~~ 333 (424)
....-...+.|+++|++..|+.+......|..+|+........+. | .+.++.+-...+.|..++..+|+
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 223334678999999777777666543339999986432221111 1 23344444456677777776665
Q ss_pred cc
Q psy3710 334 KI 335 (424)
Q Consensus 334 ~~ 335 (424)
..
T Consensus 241 ~~ 242 (318)
T 3sov_A 241 GL 242 (318)
T ss_dssp SC
T ss_pred ce
Confidence 43
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.47 E-value=5.3e-05 Score=73.46 Aligned_cols=196 Identities=9% Similarity=0.056 Sum_probs=113.2
Q ss_pred CeeeEEEe-ccCceEEEEeCCcCCCcCCCeEEEEECCCC-cEEEEEeecCCeEEEEecCCceEEEe---e-----ccEEE
Q psy3710 53 GLGHVEML-FRCNYLALVGGGTHPKYPNNRVMIWDDLKK-QVVICLEFNAPVKGVRLRRDKIVVVL---E-----GLIKV 122 (424)
Q Consensus 53 ~i~~~~~~-~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~---~-----~~i~v 122 (424)
.+....|+ |++++++.+..... ....+|+++|+.++ +.+.. ........+.|+||+..++. + ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G--~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSG--NEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSS--SSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCC--CceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 56778999 99999987764210 01246999999998 63211 01112346889999855543 2 35777
Q ss_pred EeecCCCc--eeEEEeeCCCCCeeEEEeecCCCCeEEEeecc--CCeEEEEeCCCCCCCC--ccc-ccccCCeEEEEEcc
Q psy3710 123 YTFIQCPQ--QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK--SGHVHLVDLADPERPP--LDI-AAHEAPLSCIALNQ 195 (424)
Q Consensus 123 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--dg~i~i~d~~~~~~~~--~~~-~~~~~~v~~~~~~~ 195 (424)
+++. +.+ ....+..... .....+.++||+++|+.+... ...|.++|+.++.... ..+ ........++.|+.
T Consensus 252 ~~lg-t~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMG-KLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EETT-SCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EECC-CCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 7775 332 1223332222 235577899999999874432 4568888988652222 323 33445556666554
Q ss_pred CCCEEEEEe-cC----CcEEEEEECCCc-ceee-EEec--ceeeeeecCCCCeEEEEeecCCe--EEEEeC
Q psy3710 196 TGTRLATAS-YK----GTLIRVFDTGSG-QKLN-ELRR--GLCVLCPNSNNSLLAFPGRKSGH--VHLVDL 255 (424)
Q Consensus 196 ~~~~l~~~~-~d----~~~i~iwd~~~~-~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~dg~--i~i~d~ 255 (424)
|+.|+..+ .+ .. |..+|+.++ +... .+.. ......+.+.+..++++...++. |+++|+
T Consensus 330 -g~~l~~~t~~~~a~~~~-L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 -TSHLVILTNEGGAVNHK-LLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp -TTEEEEEECTTTCTTCE-EEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred -CCEEEEEeCCCCCCCcE-EEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 55554443 33 24 777787652 2111 2222 22333455567788888888886 555665
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00015 Score=65.15 Aligned_cols=150 Identities=13% Similarity=0.010 Sum_probs=90.3
Q ss_pred eeeEEEec-cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCce-EEEeec-------cEEEEe
Q psy3710 54 LGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKI-VVVLEG-------LIKVYT 124 (424)
Q Consensus 54 i~~~~~~~-~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~-------~i~v~~ 124 (424)
...+++.| +...|.++.. .+.|+.+|+.++..............+++++++. +++++. .+..++
T Consensus 139 P~~lavdp~~~g~Lyv~d~-------~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGE-------QHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCEEEEETTEEEEEEEEEB-------TEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeC-------CCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 35678887 4566666652 2789999987766554444556789999999986 444532 233344
Q ss_pred ecCCCceeEEEeeCCCCCeeEEEeecC-CCCeEEEeeccCCeEEEEeCCCCCCCCcccc-cccCCeEEEEEccCCCEEEE
Q psy3710 125 FIQCPQQLHVFETNPNPKGLCVLCPNS-NNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 202 (424)
..........+.....+ ..++++| ++.++++ -..++.|..++.... ....... ........++|+|+|++|+.
T Consensus 212 ~~g~~~~~~~l~~~~~p---~giavdp~~g~lyv~-d~~~~~V~~~~~~~~-~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 212 RESGFKVITELTKGQNC---NGAETHPINGELYFN-SWNAGQVFRYDFTTQ-ETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp GGGTSCSEEEEEECSSC---CCEEECTTTCCEEEE-ETTTTEEEEEETTTT-EEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred CCCceeeeeeeccCCCc---eEEEEeCCCCEEEEE-ECCCCEEEEEECCCC-cEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 32111211333333333 3456788 5555544 667889999998764 2111111 11234678999999996655
Q ss_pred Ee-cCCcEEEEEECC
Q psy3710 203 AS-YKGTLIRVFDTG 216 (424)
Q Consensus 203 ~~-~d~~~i~iwd~~ 216 (424)
+. ..+. |..++..
T Consensus 287 ~d~~~~~-I~~~~~d 300 (430)
T 3tc9_A 287 VVVNQHY-ILRSDYD 300 (430)
T ss_dssp EETTTTE-EEEEEEE
T ss_pred EECCCCE-EEEEeCC
Confidence 54 4566 8887764
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.46 E-value=2.4e-05 Score=74.70 Aligned_cols=263 Identities=10% Similarity=-0.033 Sum_probs=137.9
Q ss_pred EEEECC-CCCeeEeecCC------------eEEEEeCCcCcccccccc---cCCCeeeEEEeccCceEEEEeCCcCCCcC
Q psy3710 15 YAGFNQ-DQGCFACGMED------------GFRIYNCDPLKEKERQDF---TDGGLGHVEMLFRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 15 ~~~~s~-~g~~la~g~~~------------~i~iw~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 78 (424)
++++.| +|+.++.|+.+ .+.+||..+.+....... +.......++..++..+++.+ . .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG-~-----~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG-N-----D 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECS-S-----S
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCC-C-----C
Confidence 456777 88888876431 278999887765332222 122222355666666554444 2 2
Q ss_pred CCeEEEEECCCCcEEEEEee--cCCeEEEEecCCceEEEee---------ccEEEEeecCCCceeEEEeeC---CCCCee
Q psy3710 79 NNRVMIWDDLKKQVVICLEF--NAPVKGVRLRRDKIVVVLE---------GLIKVYTFIQCPQQLHVFETN---PNPKGL 144 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~---------~~i~v~~~~~~~~~~~~~~~~---~~~~~~ 144 (424)
+..+.+||..+++-...-.. ...-.++...+++.+++.. ..+.+||.. +.+ ...+... ..+...
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~-t~~-W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS-SKT-WTSLPNAKVNPMLTAD 341 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT-TTE-EEEETTSCSGGGCCCC
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC-CCc-ceeCCCcccccccccc
Confidence 46899999987755433221 2222345566666555542 468899975 332 2222100 000000
Q ss_pred EEEeecCCCCeEEEeeccCC---------eEEEEeCCCCCCCCccccccc---------CCeEEEEEcc-CCCEEEEEec
Q psy3710 145 CVLCPNSNNSLLAFPGRKSG---------HVHLVDLADPERPPLDIAAHE---------APLSCIALNQ-TGTRLATASY 205 (424)
Q Consensus 145 ~~~~~~~~~~~l~~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~-~~~~l~~~~~ 205 (424)
....+..++..+++ |+.+| .+..||..+. ........+. ..-.++.|.. +++.++.|+.
T Consensus 342 ~~~~~~~~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~-~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 342 KQGLYRSDNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGS-GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp TTGGGTTTCSCCEE-ECGGGCEEECCSSSEEEEEECSTT-CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred ccceeecCCceEEE-ECCCCcEEEecCccceeeeecCCc-ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 00122345555555 65544 4677887764 2111111111 1223444433 6777888875
Q ss_pred CC-----------cEEEEEECCCcceeeEE----ecc--eeeeeecCCCCeEEEEeecC-----------CeEEEEeCCC
Q psy3710 206 KG-----------TLIRVFDTGSGQKLNEL----RRG--LCVLCPNSNNSLLAFPGRKS-----------GHVHLVDLAD 257 (424)
Q Consensus 206 d~-----------~~i~iwd~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~d-----------g~i~i~d~~~ 257 (424)
++ . +.+||..+.+-.... +.+ ....+..+++..+++ |+.+ ..+.+||..+
T Consensus 420 ~~~~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~-GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 420 PDYQDSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFIT-GGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp SSSSSSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEE-CCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEE-CCcccCcCcCCCCcccceEEEcCCC
Confidence 42 5 788888776543322 111 233455677777776 5432 5689999876
Q ss_pred CCCC-CeeeccCCCCeEEEEEcCCCCEEEEEeC
Q psy3710 258 PERP-PLDIAAHEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 258 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
.+-. ...+........+..+.|+|+.++.|+.
T Consensus 498 ~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 498 DTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 5411 1111112222234556789999999885
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.45 E-value=0.00054 Score=58.78 Aligned_cols=221 Identities=8% Similarity=-0.033 Sum_probs=133.1
Q ss_pred eeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC---CcEEEE-Ee-e
Q psy3710 24 CFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK---KQVVIC-LE-F 98 (424)
Q Consensus 24 ~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~---~~~~~~-~~-~ 98 (424)
+|+.+..+.|+..++++.+...... .......+.|.+.++.+..+... .+.|..+++.. +..... +. .
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSS
T ss_pred EEEEECCCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCC
Confidence 5666666679999988765433222 24456778898888888777653 58999999865 122222 22 1
Q ss_pred cCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC-CeEEEEeCCC
Q psy3710 99 NAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS-GHVHLVDLAD 173 (424)
Q Consensus 99 ~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d-g~i~i~d~~~ 173 (424)
-..+..+++.+ ++.+..+ .+.|.++++. +.....+... .......++++|.+..|+.+.... +.|...+++.
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCC--CCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 24567888875 4444444 5689999875 3333333221 112356778888777776634333 7888888865
Q ss_pred CCCCCccc-ccccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEe-----cceeeeeecCCCCeEEEEeec
Q psy3710 174 PERPPLDI-AAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELR-----RGLCVLCPNSNNSLLAFPGRK 246 (424)
Q Consensus 174 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 246 (424)
. ....+ ...-.....++++|++..|+.+.. .+. |..+|+.......... .+...+++. +..++++...
T Consensus 153 ~--~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~ 227 (316)
T 1ijq_A 153 V--DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDII 227 (316)
T ss_dssp C--CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETT
T ss_pred C--CeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECC
Confidence 2 22222 222345789999998777766654 456 9999986433222112 123445553 4667776777
Q ss_pred CCeEEEEeCCCCC
Q psy3710 247 SGHVHLVDLADPE 259 (424)
Q Consensus 247 dg~i~i~d~~~~~ 259 (424)
.+.|..++..+++
T Consensus 228 ~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 228 NEAIFSANRLTGS 240 (316)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEeCCCCc
Confidence 7888888876654
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.45 E-value=0.00073 Score=60.06 Aligned_cols=224 Identities=8% Similarity=-0.040 Sum_probs=136.0
Q ss_pred CeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC----cEEEEEe-
Q psy3710 23 GCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK----QVVICLE- 97 (424)
Q Consensus 23 ~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~- 97 (424)
.+|..+....|+..+++......... ....+..++|.+..+.+..+... .+.|+.+++... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECS
T ss_pred ceeEEeccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeC
Confidence 45666666679888887654432222 24567789999888888777653 588999988652 2222222
Q ss_pred ecCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeec-cCCeEEEEeCC
Q psy3710 98 FNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR-KSGHVHLVDLA 172 (424)
Q Consensus 98 ~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~dg~i~i~d~~ 172 (424)
.......+++.+ .+.+..+ .+.|.+.+++ +.....+... .......++++|.+..|+.+-. ..+.|...+++
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~--g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTT--TCSEEEEEEC-SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCC--CCceEEEEeC-CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 345678888886 4444444 4678888875 3323322221 1223567788887777776332 24788888887
Q ss_pred CCCCCCcccccccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEec-----ceeeeeecCCCCeEEEEeec
Q psy3710 173 DPERPPLDIAAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELRR-----GLCVLCPNSNNSLLAFPGRK 246 (424)
Q Consensus 173 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 246 (424)
.. .........-.....|++++++..|+.+.. .+. |..+|+........... +...+++ .+..++++...
T Consensus 234 G~-~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~ 309 (400)
T 3p5b_L 234 GV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDII 309 (400)
T ss_dssp SC-SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESS
T ss_pred CC-ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCC
Confidence 53 222222223356789999988777777654 455 99999865433222221 1233343 55667776777
Q ss_pred CCeEEEEeCCCCCC
Q psy3710 247 SGHVHLVDLADPER 260 (424)
Q Consensus 247 dg~i~i~d~~~~~~ 260 (424)
.+.|..+|..+++.
T Consensus 310 ~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 310 NEAIFSANRLTGSD 323 (400)
T ss_dssp SCSEEEEESSSCCC
T ss_pred CCeEEEEEcCCCCc
Confidence 78888888666553
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00012 Score=65.87 Aligned_cols=237 Identities=8% Similarity=0.032 Sum_probs=132.6
Q ss_pred ceEEEEECC-CCCeeEeecC-CeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 12 GLLYAGFNQ-DQGCFACGME-DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 12 ~V~~~~~s~-~g~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
....++++| ++..|.+... +.|+.+|.+......... .......+++.++++.+.++...... ....+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeC-C
Confidence 456789998 3444554433 349999987765432222 34456789999999977766642100 0123444443 3
Q ss_pred CcEE--EEEeecCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC
Q psy3710 90 KQVV--ICLEFNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS 163 (424)
Q Consensus 90 ~~~~--~~~~~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d 163 (424)
+... ..+........++++| ++.++++ .+.|..++.. .......... ........++++|++++|.++-...
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~-~~~~~~~~~~-~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFT-TQETTPLFTI-QDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETT-TTEEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTT
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECC-CCcEEEEEEc-CCCCcceeEEEcCCCCEEEEEECCC
Confidence 3222 2333344567888999 6766665 5788888875 3332122222 1112345789999999666646778
Q ss_pred CeEEEEeCCCCCCC---Ccccccc---------------cCCeE-EEEEc--------cCCCEEEEEecCCcEEEEEECC
Q psy3710 164 GHVHLVDLADPERP---PLDIAAH---------------EAPLS-CIALN--------QTGTRLATASYKGTLIRVFDTG 216 (424)
Q Consensus 164 g~i~i~d~~~~~~~---~~~~~~~---------------~~~v~-~~~~~--------~~~~~l~~~~~d~~~i~iwd~~ 216 (424)
+.|..++.+..... +..+.+. -.... .++.. ++|.+.++-...+. |+.++.
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~~- 369 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILTP- 369 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEECT-
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEECC-
Confidence 89999887632110 1111110 01122 45543 33555555555666 888884
Q ss_pred CcceeeEEec--------------------ceeeeeecCCCCeEEEEeecCCeEEEEeCC
Q psy3710 217 SGQKLNELRR--------------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLA 256 (424)
Q Consensus 217 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 256 (424)
+++....... ....+++++++..++++-..+..|+.++++
T Consensus 370 ~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 370 QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 4543322211 134567777666666666667777777653
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.42 E-value=0.00028 Score=63.44 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=89.3
Q ss_pred EEEeecCC--CCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC---CcEEEEEECCCcc
Q psy3710 145 CVLCPNSN--NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK---GTLIRVFDTGSGQ 219 (424)
Q Consensus 145 ~~~~~~~~--~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~~i~iwd~~~~~ 219 (424)
..++++|+ ...|.+ +...+.|+.+|..++ .+..+.........++++++|+++++.... ...+...+...+.
T Consensus 142 ~gvavd~~s~~g~Lyv-~D~~~~I~~id~~~g--~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYW-VGQRDAFRHVDFVNQ--YVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CEEEECTTTTTCEEEE-ECBTSCEEEEETTTT--EEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred ceEEEccccCCCEEEE-EeCCCCEEEEECCCC--EEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 46688874 344554 444489999998764 333333344568999999999944443311 1103333332221
Q ss_pred e-eeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-cCCCCeEEEEEcCCCCEEEEEeC-CCcEE
Q psy3710 220 K-LNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASY-KGTLI 294 (424)
Q Consensus 220 ~-~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~~i 294 (424)
. ...+. .....+++++.+..++++-..++.|+.+|..++......+. +....-..++|+|++++|+.+.. ... |
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~-I 297 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC-I 297 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE-E
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE-E
Confidence 1 01111 22456788886667777666788999999876542111111 12223357999999996666655 455 8
Q ss_pred EEEECC
Q psy3710 295 RVFDTG 300 (424)
Q Consensus 295 ~iwd~~ 300 (424)
+.++..
T Consensus 298 ~~~~~d 303 (433)
T 4hw6_A 298 YRVDYN 303 (433)
T ss_dssp EEEEBC
T ss_pred EEEeCC
Confidence 988765
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.40 E-value=0.00033 Score=57.40 Aligned_cols=195 Identities=11% Similarity=0.106 Sum_probs=121.4
Q ss_pred cCCeEEEEecCCc-eEEE-ee--ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCC
Q psy3710 99 NAPVKGVRLRRDK-IVVV-LE--GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP 174 (424)
Q Consensus 99 ~~~v~~~~~~~~~-~~~~-~~--~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~ 174 (424)
...+..++++|++ .+.+ .+ +.|..+|. .++.+..+.... ....-.+++.+++.++++ .-.++.+.++++...
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~--~g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs-~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTT--NGDLIRTIPLDF-VKDLETIEYIGDNQFVIS-DERDYAIYVISLTPN 101 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEET--TCCEEEEEECSS-CSSEEEEEECSTTEEEEE-ETTTTEEEEEEECTT
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeC--CCCEEEEEecCC-CCChHHeEEeCCCEEEEE-ECCCCcEEEEEcCCC
Confidence 4579999999865 3333 44 45555565 467777664322 123445677788876665 566788999988764
Q ss_pred CC--CCccc------ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECC---CcceeeEEe----------cceeeeee
Q psy3710 175 ER--PPLDI------AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG---SGQKLNELR----------RGLCVLCP 233 (424)
Q Consensus 175 ~~--~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~---~~~~~~~~~----------~~~~~~~~ 233 (424)
.. ..... ...+.....++|+|.++.|+++..... ..+|.+. ....+..+. .....+++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 22 01111 123455789999999988887777655 5555553 111122221 23577889
Q ss_pred cCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-cC------CCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 234 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-AH------EAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 234 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~------~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+|....+++....+..+..+|..........+. +. -.....|+|.++|+ |+..++... ++.+...
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~-~y~f~~~ 252 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNR-FYRFTPQ 252 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTE-EEEEEC-
T ss_pred cCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCce-EEEEEec
Confidence 999888888888899999999775421111222 11 13678999999997 444466665 6766543
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.39 E-value=0.00054 Score=66.16 Aligned_cols=222 Identities=9% Similarity=-0.009 Sum_probs=137.2
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecCCC---ceeEEEeeCCCCCeeEEEeecC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQCP---QQLHVFETNPNPKGLCVLCPNS 151 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 151 (424)
...|+..++........+.....+.++++.+. +.++.+ .+.|+.+++.... .....+.... .....+++.+
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--~~P~GLAvD~ 480 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW 480 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEET
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--CCcceeeeee
Confidence 46788888876665555555667889999874 444444 4678888875211 2222222111 2234567777
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec-C-CcEEEEEECCCcceeeEEec---
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-K-GTLIRVFDTGSGQKLNELRR--- 226 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~~i~iwd~~~~~~~~~~~~--- 226 (424)
.+..|+++-...+.|.+.++... .....+...-.....|++.|.+..|+.... . +. |...++........+..
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~-~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~-I~~~~~dG~~~~~lv~~~l~ 558 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGV-KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGVDIYSLVTENIQ 558 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSS-SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCCEEEEECSSCS
T ss_pred cCCcEEEEecCCCeEEEEeCCCC-eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCe-EEEEecCCCceEEEEeCCCC
Confidence 77777765777899999999863 222222233455789999997666665543 2 66 88889865544333332
Q ss_pred ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeecc--CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEECCCCc
Q psy3710 227 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA--HEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQ 303 (424)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~ 303 (424)
....+++++.++.|+++-...+.|..+++..... ...+.. .-....+|++.. ..|+.+.. .+. |...|..+|+
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~--~~lYwtD~~~~~-I~~~dk~tG~ 634 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE--DKVFWTDIINEA-IFSANRLTGS 634 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET--TEEEEEETTTTE-EEEEETTTCC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeC--CEEEEEECCCCE-EEEEeCCCCc
Confidence 2567899998888888777788999999976442 222222 223445666643 35555544 455 8888877776
Q ss_pred eeeee
Q psy3710 304 KLNEL 308 (424)
Q Consensus 304 ~~~~~ 308 (424)
.+..+
T Consensus 635 ~~~~l 639 (791)
T 3m0c_C 635 DVNLL 639 (791)
T ss_dssp CCEEE
T ss_pred ceEEe
Confidence 65554
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.39 E-value=0.00045 Score=62.05 Aligned_cols=236 Identities=9% Similarity=0.017 Sum_probs=130.8
Q ss_pred ceEEEEECCC---CCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCC-eEEEEEC
Q psy3710 12 GLLYAGFNQD---QGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNN-RVMIWDD 87 (424)
Q Consensus 12 ~V~~~~~s~~---g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~-~i~iwd~ 87 (424)
....++|+|+ |.++++-....|+.++..+++...... .......+++.++++ |.++..... .+. .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~---~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSS---DTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSC---TTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCC---cccceEEEEEC
Confidence 4568899985 554444333449999987665533222 244577899999999 544442100 011 2333332
Q ss_pred CCCcE-EEEEeecCCeEEEEecC-CceEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc
Q psy3710 88 LKKQV-VICLEFNAPVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK 162 (424)
Q Consensus 88 ~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (424)
..+.. ...+........+++.| ++.+.++ ++.|+.++.. ++.....+...........++++|+++.|.++-..
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~-~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA-TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTT-TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC-CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 22111 11222334567788998 6666555 5678888874 34442222222111223468999999966664667
Q ss_pred CCeEEEEeCCCCCCCC---cccccc---------------cCCeEEEEE---------ccCCCEEEEEecCCcEEEEEEC
Q psy3710 163 SGHVHLVDLADPERPP---LDIAAH---------------EAPLSCIAL---------NQTGTRLATASYKGTLIRVFDT 215 (424)
Q Consensus 163 dg~i~i~d~~~~~~~~---~~~~~~---------------~~~v~~~~~---------~~~~~~l~~~~~d~~~i~iwd~ 215 (424)
.+.|+.++........ ..+.+. -.....+++ .++|.+.++-...+. |+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~~ 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLTP 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEECT
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEECC
Confidence 8899998876321111 111111 123567898 667766666666677 888885
Q ss_pred CCcceeeEEec--------------------ceeeeeecCCCCeEEEEeecCCeEEEEeC
Q psy3710 216 GSGQKLNELRR--------------------GLCVLCPNSNNSLLAFPGRKSGHVHLVDL 255 (424)
Q Consensus 216 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~ 255 (424)
++........ ....++++|.+..++++-..++.|+.+++
T Consensus 373 -~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 373 -EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 4533222210 12345666555555555555666666654
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.33 E-value=0.0017 Score=62.74 Aligned_cols=225 Identities=7% Similarity=-0.061 Sum_probs=134.2
Q ss_pred eeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCC----cEEEEEe-e
Q psy3710 24 CFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK----QVVICLE-F 98 (424)
Q Consensus 24 ~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~-~ 98 (424)
+|+.+....|+..+++......... .......+++.+..+.|+.+... .+.|+.+++... .....+. .
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSS
T ss_pred ccccccccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecC
Confidence 5555555568888876554322222 24556678888877777777653 578988888643 1222222 2
Q ss_pred cCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc-CCeEEEEeCCC
Q psy3710 99 NAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK-SGHVHLVDLAD 173 (424)
Q Consensus 99 ~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-dg~i~i~d~~~ 173 (424)
...+..|++.+.+ .+..+ .+.|.+.++. +.....+.... ......++++|.+.+|+.+-.. .+.|...++..
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld--G~~~~~l~~~~-l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKTLFREN-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEEEEEECT-TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCC--CCeEEEEEeCC-CCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 3456788888655 33334 5688888875 33333332211 1235678888887777763323 37888888875
Q ss_pred CCCCCcccccccCCeEEEEEccCCCEEEEEec-CCcEEEEEECCCcceeeEEecc---eeeeeecCCCCeEEEEeecCCe
Q psy3710 174 PERPPLDIAAHEAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELRRG---LCVLCPNSNNSLLAFPGRKSGH 249 (424)
Q Consensus 174 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dg~ 249 (424)
. .....+...-.....|++++.+..|+.+.. ... |...++........+... ...+.+...+..++++-...+.
T Consensus 547 ~-~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 547 V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEA 624 (791)
T ss_dssp C-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTE
T ss_pred C-ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCE
Confidence 3 222222223356789999987777766654 455 999998654443333321 1222333355677777777888
Q ss_pred EEEEeCCCCCC
Q psy3710 250 VHLVDLADPER 260 (424)
Q Consensus 250 i~i~d~~~~~~ 260 (424)
|...|..+++.
T Consensus 625 I~~~dk~tG~~ 635 (791)
T 3m0c_C 625 IFSANRLTGSD 635 (791)
T ss_dssp EEEEETTTCCC
T ss_pred EEEEeCCCCcc
Confidence 99888777654
No 289
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.29 E-value=0.0011 Score=55.43 Aligned_cols=194 Identities=17% Similarity=0.278 Sum_probs=127.8
Q ss_pred EEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEEE
Q psy3710 16 AGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVI 94 (424)
Q Consensus 16 ~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~~ 94 (424)
.-.+|..+.+|.-....+.|+|+++.+.+..... ...|..=.|. +.+.|+.++ +..|+-|+++. ..+++
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~-~e~VvfWkWi-s~~~L~lVT--------~taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQPVK 141 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC-SSCEEEEEEC-SSSEEEEEE--------SSEEEEEESSTTCCCEE
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceec-CCccEEEEec-CCCeEEEEc--------CCcEEEEcccCCCCCce
Confidence 4568999999977655699999999988877777 4556444554 456777777 58999999864 35555
Q ss_pred EEe-e----cCCeEEEEecCCceEEEe----------eccEEEEeecCCCceeEEEeeCCCCCeeEEEee--cCCCC-eE
Q psy3710 95 CLE-F----NAPVKGVRLRRDKIVVVL----------EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCP--NSNNS-LL 156 (424)
Q Consensus 95 ~~~-~----~~~v~~~~~~~~~~~~~~----------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~l 156 (424)
.+. | ...|..-..+++.++++. .|.+.+|..+ .+..+.+++|... ...+.. ++... ++
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~--F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAAS--FAQFKMEGNAEESTLF 217 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEEECCSEEE--EEEECCTTCSSCEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--ccccceeeeeeee--eEEEecCCCCCCceEE
Confidence 555 2 346777777888866553 5889999974 5566667766421 111111 11112 23
Q ss_pred EEeecc---CCeEEEEeCCCC--CCCCcc-------c--ccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceee
Q psy3710 157 AFPGRK---SGHVHLVDLADP--ERPPLD-------I--AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN 222 (424)
Q Consensus 157 ~~~~~~---dg~i~i~d~~~~--~~~~~~-------~--~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~ 222 (424)
+. +.. .+.+++.++... ..+... + ..-.+-..++..++.-..++..+.-|. +++||++++.++.
T Consensus 218 ~f-a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~ 295 (365)
T 2xzh_A 218 CF-AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIY 295 (365)
T ss_dssp EE-EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEE
T ss_pred EE-EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEE
Confidence 33 333 268999998543 111110 0 112445567777877778888899999 9999999999987
Q ss_pred EEe
Q psy3710 223 ELR 225 (424)
Q Consensus 223 ~~~ 225 (424)
.-+
T Consensus 296 ~nr 298 (365)
T 2xzh_A 296 MNR 298 (365)
T ss_dssp EEE
T ss_pred Eec
Confidence 665
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.29 E-value=0.00079 Score=57.41 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=85.0
Q ss_pred CCCeEEEEECCCCcEEEEEeecCCeEEEEecCCc--------eEEEe--e---ccEEEEeecCCCceeEEEeeC------
Q psy3710 78 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK--------IVVVL--E---GLIKVYTFIQCPQQLHVFETN------ 138 (424)
Q Consensus 78 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~--~---~~i~v~~~~~~~~~~~~~~~~------ 138 (424)
..+-+.+||+ +|+.++.+.. +.++.+..-|+- ..+++ + ++|.+|++......+..+...
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 3689999999 9999988764 667777776643 23444 3 579999885344445554221
Q ss_pred --CCCCeeEEEeecCC-CC-eEEEeeccCCeEEEEeCCCCC------CCCcccccccCCeEEEEEccCCCEEEEEecCCc
Q psy3710 139 --PNPKGLCVLCPNSN-NS-LLAFPGRKSGHVHLVDLADPE------RPPLDIAAHEAPLSCIALNQTGTRLATASYKGT 208 (424)
Q Consensus 139 --~~~~~~~~~~~~~~-~~-~l~~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 208 (424)
..+.+++ +.-++. ++ ++++ ...+|.+..|++.... +.++++.. .+.+..+...+....|+.+-++..
T Consensus 126 ~~~~pyGlc-ly~~~~~g~~yafV-~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 126 AINEVYGFT-LYHSQKTGKYYAMV-TGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp CCSSCCCEE-EEECTTTCCEEEEE-ECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE
T ss_pred CCCCeeEEE-EEecCCCCcEEEEE-ECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce
Confidence 2233332 222553 44 4554 7888999999984311 22333332 457788888888888988888877
Q ss_pred EEEEEECC
Q psy3710 209 LIRVFDTG 216 (424)
Q Consensus 209 ~i~iwd~~ 216 (424)
|..++.+
T Consensus 203 -Iw~~da~ 209 (355)
T 3amr_A 203 -IWKFSAE 209 (355)
T ss_dssp -EEEEECS
T ss_pred -EEEEeCC
Confidence 7777754
No 291
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.27 E-value=0.0031 Score=59.38 Aligned_cols=348 Identities=9% Similarity=-0.000 Sum_probs=183.2
Q ss_pred CCceEEEEECCCCCeeEee-cCCe-EEEEeCCcCcc-cccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEE
Q psy3710 10 KNGLLYAGFNQDQGCFACG-MEDG-FRIYNCDPLKE-KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWD 86 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g-~~~~-i~iw~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd 86 (424)
-.....++|++.+..|..+ ...+ |..++.+.... .............+++.+.+..+..+... .+.|.+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~------~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE------TNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT------TTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC------CCEEEEEE
Confidence 3456788999876666644 3334 88888765432 11111122456778888877777777643 58999999
Q ss_pred CCCCcEEEEEe-ecCCeEEEEecCC-ceEEEee----ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee
Q psy3710 87 DLKKQVVICLE-FNAPVKGVRLRRD-KIVVVLE----GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 87 ~~~~~~~~~~~-~~~~v~~~~~~~~-~~~~~~~----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (424)
+........+. .-.....+++.|. +.+..+| +.|...+++ +.....+... .......+++++++..|..+-
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d--G~~~~~l~~~-~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIIINS-EIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEECS-SCSSEEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC--CCceEEEEeC-CCCCCcEEEEEccCCEEEEEe
Confidence 86543322222 3456788999886 5555554 355555653 4333333221 123456788888877777756
Q ss_pred ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecc-------------
Q psy3710 161 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG------------- 227 (424)
Q Consensus 161 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~------------- 227 (424)
...+.|..+|++.. .......+.......|++.++ ..+++-...+. |...|..+++....+...
T Consensus 190 ~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~-V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~ 266 (619)
T 3s94_A 190 AKLNFIHKSNLDGT-NRQAVVKGSLPHPFALTLFED-ILYWTDWSTHS-ILACNKYTGEGLREIHSDIFSPMDIHAFSQQ 266 (619)
T ss_dssp TTTCCEEEESSSCC-EEC---------CCCEEESSS-EEEEECTTTCS-EEEEESSSCCCCEECCSCCCCCSEEEECCGG
T ss_pred CCCCeEEEecCCCC-ccEEEEeCCCCCceEEEEeCC-EEEEecCCCCE-EEEEECCCCcccEEEecCCCCCcEEEEEccc
Confidence 67788999998763 222222212222346677655 34444445566 888887766433222100
Q ss_pred ---------------eeeeee-----------cC-------C--------CCeEEEEeecCCeEEEEeCCCCCCCCeeec
Q psy3710 228 ---------------LCVLCP-----------NS-------N--------NSLLAFPGRKSGHVHLVDLADPERPPLDIA 266 (424)
Q Consensus 228 ---------------~~~~~~-----------~~-------~--------~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~ 266 (424)
...+|+ .| + ...+++ +..+.|+..++.........+.
T Consensus 267 ~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~--~~~~~i~~i~l~~~~~~~~~~~ 344 (619)
T 3s94_A 267 RQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL--ARRTDLRRISLDTPDFTDIVLQ 344 (619)
T ss_dssp GSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE--EESSCEEEEESSSTTCCCEECC
T ss_pred cCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE--EcccceEEEecCCCccceeEEe
Confidence 000111 11 1 112222 2345777777776542222221
Q ss_pred -cCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEECCCCceeeee------------cc-CCcEEEEEeCCCcEEEEEccc
Q psy3710 267 -AHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQKLNEL------------RR-DSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 267 -~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~~~~~~------------~~-~~~~l~~~~~d~~i~iw~~~~ 331 (424)
..-..+.+++|++.+..|+.+. ..+. |+.+++........+ .+ .+++.++-+..+.|.+.++..
T Consensus 345 ~~~l~~~~~ld~d~~~~~ly~sD~~~~~-I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 345 LEDIRHAIAIDYDPVEGYIYWTDDEVRA-IRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp CSCCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccccCccEEEEEEcCCCeEEEEeCCCCe-EEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 1234578899998655665555 4566 999988754322211 11 233344444455666666654
Q ss_pred cccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEec--cCcEEEEEec
Q psy3710 332 AQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICA--DGSYYKFMFN 394 (424)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~--dg~v~~~~~~ 394 (424)
... ..+ ....-.....+++.|...+|+.+.. .+.|...+++
T Consensus 424 ~~~-~~l---------------------~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 424 TMR-KIL---------------------ISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp CSC-EEE---------------------ECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CeE-EEE---------------------EECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC
Confidence 211 000 0001123567888887566666543 2455555544
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.26 E-value=0.0012 Score=54.12 Aligned_cols=194 Identities=9% Similarity=0.076 Sum_probs=126.3
Q ss_pred CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec--CCeEEEEecCCceEEEe---eccEEEEee
Q psy3710 51 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN--APVKGVRLRRDKIVVVL---EGLIKVYTF 125 (424)
Q Consensus 51 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~---~~~i~v~~~ 125 (424)
.+.+..+++.|+++.|.++... ++.|...|.. ++.++.+... .....+++.+++.++++ ++.+.++++
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINK------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEET------TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ccCcceeEEeCCCCEEEEEECC------CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3568999999998888887754 6899999987 9998888743 57889999999887665 568889988
Q ss_pred cCCCc--eeEEEee----CCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCC--CCCCCccc-------ccccCCeEE
Q psy3710 126 IQCPQ--QLHVFET----NPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLAD--PERPPLDI-------AAHEAPLSC 190 (424)
Q Consensus 126 ~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~--~~~~~~~~-------~~~~~~v~~ 190 (424)
..... .+..... .....+.-.++++|.++.|.+ +.+.....+|.++. .......+ ..+...+.+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v-a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF-FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE-EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE-EECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 64443 2233321 122344578899999987777 55544444554431 10111211 112346789
Q ss_pred EEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe--c----------ceeeeeecCCCCeEEEEeecCCeEEEEeC
Q psy3710 191 IALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR--R----------GLCVLCPNSNNSLLAFPGRKSGHVHLVDL 255 (424)
Q Consensus 191 ~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~ 255 (424)
++++|....++..+.....+..+|.. ++.+..+. . ....+++.++|..++ .++.+.++.|..
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI--vsE~n~~y~f~~ 251 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI--VSEPNRFYRFTP 251 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE--EETTTEEEEEEC
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE--EcCCceEEEEEe
Confidence 99999766555555444438888865 55554443 1 246789999986443 466677777754
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.26 E-value=0.0056 Score=61.88 Aligned_cols=347 Identities=11% Similarity=0.090 Sum_probs=175.1
Q ss_pred CCceEEEEECCC------CCeeEeecC-Ce-EEEEeCCcCcccccccccC-CCeeeEEEec-cC-ceEEEEeCCcCCCcC
Q psy3710 10 KNGLLYAGFNQD------QGCFACGME-DG-FRIYNCDPLKEKERQDFTD-GGLGHVEMLF-RC-NYLALVGGGTHPKYP 78 (424)
Q Consensus 10 ~~~V~~~~~s~~------g~~la~g~~-~~-i~iw~~~~~~~~~~~~~~~-~~i~~~~~~~-~~-~~l~~~~~~~~~~~~ 78 (424)
++.|.|+++.|. ++++|+|.. ++ ++|+++.+.+.+....... .....+.+.. .+ .+|. ++- .
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~-igl------~ 625 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLL-CAL------G 625 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEE-EEE------T
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEE-EEe------C
Confidence 567999999864 378999985 66 9999998766544333321 1223333322 22 3343 332 3
Q ss_pred CCeEEEEE--CCCCcEEEE--Ee-ecCCeEEEEecCCc--eEEEe-eccEEEEeecCCCceeEEEeeCCC-CCeeEEEee
Q psy3710 79 NNRVMIWD--DLKKQVVIC--LE-FNAPVKGVRLRRDK--IVVVL-EGLIKVYTFIQCPQQLHVFETNPN-PKGLCVLCP 149 (424)
Q Consensus 79 d~~i~iwd--~~~~~~~~~--~~-~~~~v~~~~~~~~~--~~~~~-~~~i~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 149 (424)
||.+.-+. ..+|+.... .. ...++.=..+...+ .+++. +....+|.- .++.... ..... ...++.+.-
T Consensus 626 dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~--~~~l~~s-~l~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 626 DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSS--NHKLVFS-NVNLKEVNYMCPLNS 702 (1158)
T ss_dssp TSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEES--SSSEEEE-EBSSSCCCEEEEECC
T ss_pred CCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEc--CCceEEe-ccChHHhceEeccCc
Confidence 67776554 345555432 12 23444433343322 23333 555445543 2222211 11111 112333321
Q ss_pred cCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC-----------------------
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK----------------------- 206 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------------- 206 (424)
..-..-++. ..++.++|..++...+....--.-...+..++++|+.+.++.+..+
T Consensus 703 e~~~~g~v~--~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 703 DGYPDSLAL--ANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp SSSTTEEEE--ECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSE
T ss_pred ccCCCcEEE--EcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhh
Confidence 111223443 3345688888765322111111223567788888876654433211
Q ss_pred --------------------------CcEEEEEECCCcceeeEEecc-------eeeeeecCCCCeEEEEee--------
Q psy3710 207 --------------------------GTLIRVFDTGSGQKLNELRRG-------LCVLCPNSNNSLLAFPGR-------- 245 (424)
Q Consensus 207 --------------------------~~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-------- 245 (424)
.. |++.|..+.+.+..++-. +..+.+..+...+++.|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~-i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~ 859 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHN-LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEA 859 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEE-EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCS
T ss_pred hcccccccccccccCchhhcCCceeeEE-EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCC
Confidence 23 677777777766555422 222233333334444465
Q ss_pred --cCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceee------------eeccC
Q psy3710 246 --KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN------------ELRRD 311 (424)
Q Consensus 246 --~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~------------~~~~~ 311 (424)
..|.|++|++...+.....-...++++++++-- +| +|++|-. .. |++|++...+.+. .+...
T Consensus 860 ~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig-~~-l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~ 935 (1158)
T 3ei3_A 860 EPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASIN-ST-VRLYEWTTEKELRTECNHYNNIMALYLKTK 935 (1158)
T ss_dssp SCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEET-TE-EEEEEECTTSCEEEEEEECCCSCEEEEEEE
T ss_pred CCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcC-CE-EEEEECCCCceEEEEeeccccEEEEEEecc
Confidence 357899999974321111222456788888743 45 4444433 45 9999998654333 11223
Q ss_pred CcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeec--CCCceEEEEecCCCeEEEEeccCcEE
Q psy3710 312 SSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIP--SDPPCICAFGADSNSIIVICADGSYY 389 (424)
Q Consensus 312 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~l~~~~~dg~v~ 389 (424)
+.+++.|..-..+.++..+..+ .+ +..+..+ ...++++.|-.+ ..++.+..+|.+.
T Consensus 936 ~~~I~vgD~~~Sv~~~~y~~~~--~~-------------------L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~ 993 (1158)
T 3ei3_A 936 GDFILVGDLMRSVLLLAYKPME--GN-------------------FEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLF 993 (1158)
T ss_dssp TTEEEEEESSBCEEEEEEETTT--TE-------------------EEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEE
T ss_pred CCEEEEEEhhheEEEEEEEcCC--Ce-------------------EEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEE
Confidence 5566666665555555433210 00 0001111 112445555444 4777799999999
Q ss_pred EEEecC
Q psy3710 390 KFMFNS 395 (424)
Q Consensus 390 ~~~~~~ 395 (424)
++.+++
T Consensus 994 vl~~~~ 999 (1158)
T 3ei3_A 994 VCQKDS 999 (1158)
T ss_dssp EEEECT
T ss_pred EEecCC
Confidence 999886
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.22 E-value=0.0039 Score=58.78 Aligned_cols=218 Identities=10% Similarity=-0.024 Sum_probs=137.8
Q ss_pred CCeEEEEECCCCcEEEEEee--cCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCC
Q psy3710 79 NNRVMIWDDLKKQVVICLEF--NAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSN 152 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (424)
.+.|+..++++......+.. -..+.+++|.+.. .+..+ .+.|..+++. .......+.... .....+++++.
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~-g~~~~~v~~~g~--~~P~GlAvD~~ 90 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMN-GSALEHVVEFGL--DYPEGMAVDWL 90 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSC--SCCCEEEEETT
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECC-CCCcEEEEeCCC--CCcceEEEEeC
Confidence 47899999987654443332 3468899999754 44444 5788888875 322222232221 12334566666
Q ss_pred CCeEEEeeccCCeEEEEeCCCCCCCCccc-ccccCCeEEEEEccCCCEEEEEec--CCcEEEEEECCCcceeeEEe--cc
Q psy3710 153 NSLLAFPGRKSGHVHLVDLADPERPPLDI-AAHEAPLSCIALNQTGTRLATASY--KGTLIRVFDTGSGQKLNELR--RG 227 (424)
Q Consensus 153 ~~~l~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~~i~iwd~~~~~~~~~~~--~~ 227 (424)
+..|+.+-...+.|.+.+++.. ....+ ...-.....|++.|....|+.... .+. |...++.......... ..
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~--~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~-I~r~~~dG~~~~~l~~~~~~ 167 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQ--HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK-IDRAAMDGSERTTLVPNVGR 167 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTST--TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEEEECSCSS
T ss_pred CCEEEEEECCCCEEEEEecCCC--cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE-EEEEeCCCCceEEEECCCCC
Confidence 6667664677889999999764 22222 233455789999996556655542 456 8888876544332222 22
Q ss_pred eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceee
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLN 306 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~ 306 (424)
...+++++.++.+.++-...+.|..+|+..... ..+...-.....+++.. +..+.+-...+. |...|..+|+...
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQNRT 242 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCE
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCceE
Confidence 567899999999998888889999999976543 33334445567888865 334444444566 8888887775443
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.22 E-value=0.0024 Score=57.70 Aligned_cols=152 Identities=13% Similarity=0.060 Sum_probs=90.0
Q ss_pred eeeEEEec-cCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec----CCeEEEEe-------cCCce-EEEe-ec-
Q psy3710 54 LGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN----APVKGVRL-------RRDKI-VVVL-EG- 118 (424)
Q Consensus 54 i~~~~~~~-~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~----~~v~~~~~-------~~~~~-~~~~-~~- 118 (424)
...+++.| +.+.|.++... .+.|++.|++++......... .....++| ++++. ++++ +.
T Consensus 141 p~~la~dp~~~~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEEETTEEEEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CCEEEEccCCCCEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 34678887 35555555532 367999998777666544422 25899999 98886 4444 21
Q ss_pred -------cEEEEeecCCCcee-----EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCC-------CCCC--C
Q psy3710 119 -------LIKVYTFIQCPQQL-----HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA-------DPER--P 177 (424)
Q Consensus 119 -------~i~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~-------~~~~--~ 177 (424)
.|.+++...++... ..+....++ ..++.+|++..|+++-..++.|..+|+. ++.. +
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p---~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQC---NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCC---CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CCcccCceEEEEecCCCCceeecccceeeccCCCc---eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 25566533212221 233322223 3457788666666547788999999997 4321 0
Q ss_pred --------Ccc-cc-cccCCeEEEEEccCCCEEEEEe-cCCcEEEEEEC
Q psy3710 178 --------PLD-IA-AHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDT 215 (424)
Q Consensus 178 --------~~~-~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~ 215 (424)
... +. +.......++|+|+|+.|+.+. .... |+.++.
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~-I~kid~ 339 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY-FMRSDY 339 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE-EEEEEE
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE-EEEEec
Confidence 001 11 1234468999999999655554 4555 888654
No 296
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.19 E-value=0.00024 Score=71.05 Aligned_cols=213 Identities=13% Similarity=0.178 Sum_probs=141.6
Q ss_pred EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEe-cCCc
Q psy3710 33 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRL-RRDK 111 (424)
Q Consensus 33 i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~-~~~~ 111 (424)
|.|.|+.......+..... -+.-+.|..+.+++-. ..++.|+|+++...++.+..+.+|.--.| +++.
T Consensus 50 vvIidl~~~~~~~rrpi~A---dsAIMnP~~~iiALra--------g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~ 118 (1630)
T 1xi4_A 50 VVIIDMNDPSNPIRRPISA---DSAIMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT 118 (1630)
T ss_pred EEEEECCCCCCcccccccc---hhhccCCCcceEEEec--------CCeEEEeehHHhhhhcccccCCCceEEEecCCCe
Confidence 9999988766643322211 1233567777777765 37999999999999999998888888888 4666
Q ss_pred eEEEeeccEEEEeecCCCceeEEEeeCC--CCCeeEEEeecCCCCeEEEeec------cCCeEEEEeCCCCCCCCccccc
Q psy3710 112 IVVVLEGLIKVYTFIQCPQQLHVFETNP--NPKGLCVLCPNSNNSLLAFPGR------KSGHVHLVDLADPERPPLDIAA 183 (424)
Q Consensus 112 ~~~~~~~~i~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~------~dg~i~i~d~~~~~~~~~~~~~ 183 (424)
..++++..|..|++..+..+.+.+..|. ....+.....+++.++++..|- -.|.+.+|..+. +..+.+.+
T Consensus 119 l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~ieg 196 (1630)
T 1xi4_A 119 VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEG 196 (1630)
T ss_pred eEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhH
Confidence 7777899999999965555655555543 2355778888999999887553 458999999986 45667778
Q ss_pred ccCCeEEEEEcc--C-CCEEEEEec---CCcEEEEEECCCc---ceee-----E--Eec----c-eeeeeecCCCCeEEE
Q psy3710 184 HEAPLSCIALNQ--T-GTRLATASY---KGTLIRVFDTGSG---QKLN-----E--LRR----G-LCVLCPNSNNSLLAF 242 (424)
Q Consensus 184 ~~~~v~~~~~~~--~-~~~l~~~~~---d~~~i~iwd~~~~---~~~~-----~--~~~----~-~~~~~~~~~~~~~~~ 242 (424)
|.+....+.... . ...++.+.. .+. ++|.++... .+.. . ++. . ...+..++..+.+.+
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 876655555432 1 223333322 256 899988543 1111 0 111 1 233445555555554
Q ss_pred EeecCCeEEEEeCCCCCC
Q psy3710 243 PGRKSGHVHLVDLADPER 260 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~ 260 (424)
-+.-|.|++||+.++..
T Consensus 276 -itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 276 -ITKYGYIHLYDLETGTC 292 (1630)
T ss_pred -EecCceEEEEecccchh
Confidence 78999999999999874
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.18 E-value=0.0048 Score=58.19 Aligned_cols=196 Identities=11% Similarity=-0.022 Sum_probs=120.9
Q ss_pred CceEEEEECCCCCeeE-eecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC
Q psy3710 11 NGLLYAGFNQDQGCFA-CGMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL 88 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la-~g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~ 88 (424)
..+..++|++.+..|. +-..++ |..++++.................+++.+.+..|..+... .+.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~------~~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG------TNRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT------TTEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC------CCEEEEEecC
Confidence 3577899998766666 444444 8888876543322222112345668888777777766643 5899999986
Q ss_pred CCcEEEEE-eecCCeEEEEecC-CceEEEee----ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc
Q psy3710 89 KKQVVICL-EFNAPVKGVRLRR-DKIVVVLE----GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK 162 (424)
Q Consensus 89 ~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (424)
.......+ ..-....++++.| .+.+..+| +.|...+++ +.....+-. .......+++++++..|..+-..
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTLVP--NVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC--SCSSEEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEEEC--CCCCcceEEEccccCEEEEEECC
Confidence 44332222 2345678999998 46655554 356666664 333333322 22345678889888888775667
Q ss_pred CCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce
Q psy3710 163 SGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK 220 (424)
Q Consensus 163 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~ 220 (424)
.+.|..+|+..... ..+...-.....+++.. +..+++-...+. |...|..+++.
T Consensus 187 ~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~ 240 (628)
T 4a0p_A 187 TNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQN 240 (628)
T ss_dssp TTEEEEEETTSCSC--EEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCS
T ss_pred CCEEEEEcCCCCce--EEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCc
Confidence 88999999976422 33433344556788765 344444445666 88888766643
No 298
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.17 E-value=0.0029 Score=55.25 Aligned_cols=195 Identities=17% Similarity=0.270 Sum_probs=128.8
Q ss_pred EEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEE
Q psy3710 15 YAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVV 93 (424)
Q Consensus 15 ~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~ 93 (424)
+.-.+|..+.+|.-....+.|||+++...+..+..+ ..|..=.|. +.+.|+.++ +..|+-|+++. ..++
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~-e~VvfWkWi-s~~~l~lVT--------~taVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQPV 139 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS-SCCCEEEEE-ETTEEEEEC--------SSEEEEEESSSSCCCE
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC-CCceEEEec-CCCeEEEEc--------CCeeEEecccCCCCch
Confidence 345788889999776666999999998887777773 456455554 456677777 68999999864 3455
Q ss_pred EEEe-e----cCCeEEEEecCCceEEEe----------eccEEEEeecCCCceeEEEeeCCCCCeeEEEee--cCCC-Ce
Q psy3710 94 ICLE-F----NAPVKGVRLRRDKIVVVL----------EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCP--NSNN-SL 155 (424)
Q Consensus 94 ~~~~-~----~~~v~~~~~~~~~~~~~~----------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~ 155 (424)
+.+. | ...|..-..+++..+++. .|.+.+|..+ .+..+.+++|... ...+.. ++.. ..
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~ieGhaa~--F~~~~~~g~~~~~~l 215 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAAS--FAQFKMEGNAEESTL 215 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST--TCCEEEECCSEEE--EEEEECTTCSSEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc--ccccchheeeeee--eEEEecCCCCCCceE
Confidence 5555 2 346777777888866653 6889999985 4555666766421 111111 1111 22
Q ss_pred EEEeecc---CCeEEEEeCCCC--CCCCcc---------cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCccee
Q psy3710 156 LAFPGRK---SGHVHLVDLADP--ERPPLD---------IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 221 (424)
Q Consensus 156 l~~~~~~---dg~i~i~d~~~~--~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~ 221 (424)
++. +.. .+.+++.++... ..+... -..-.+--.++..++.-..++..+.-|. +++||++++.++
T Consensus 216 f~f-a~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~-i~lyDleTgt~i 293 (494)
T 1bpo_A 216 FCF-AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCI 293 (494)
T ss_dssp EEE-EECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEE
T ss_pred EEE-EEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce-EEEEecccceee
Confidence 333 433 378999998643 111110 0122445567888887788888999999 999999999998
Q ss_pred eEEe
Q psy3710 222 NELR 225 (424)
Q Consensus 222 ~~~~ 225 (424)
..-+
T Consensus 294 ~~nr 297 (494)
T 1bpo_A 294 YMNR 297 (494)
T ss_dssp EEEE
T ss_pred eeec
Confidence 7665
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.0017 Score=58.67 Aligned_cols=244 Identities=5% Similarity=0.000 Sum_probs=131.3
Q ss_pred ceEEEEECC-CCCeeEeecCC-e-EEEEeCCcCcccccccc---cCCCeeeEEE-------eccCceEEEEeCCcCCCcC
Q psy3710 12 GLLYAGFNQ-DQGCFACGMED-G-FRIYNCDPLKEKERQDF---TDGGLGHVEM-------LFRCNYLALVGGGTHPKYP 78 (424)
Q Consensus 12 ~V~~~~~s~-~g~~la~g~~~-~-i~iw~~~~~~~~~~~~~---~~~~i~~~~~-------~~~~~~l~~~~~~~~~~~~ 78 (424)
....|+|+| ++..|.++... . |++.|.+.......... .......++| .++++.++++.........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899999 35445544443 3 99999887665432222 1234678899 9999877777633100000
Q ss_pred CCeEEEEECCC-CcEE-----EEEeecCCeEEEEecCC-ceEEEe---eccEEEEeecC------CCce-----------
Q psy3710 79 NNRVMIWDDLK-KQVV-----ICLEFNAPVKGVRLRRD-KIVVVL---EGLIKVYTFIQ------CPQQ----------- 131 (424)
Q Consensus 79 d~~i~iwd~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~~~~---~~~i~v~~~~~------~~~~----------- 131 (424)
+..|.+.+... +... ..+..-.....++++|+ +.++++ ++.|..+|+.. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 12366665333 2221 22222234467888984 554444 67899999851 2221
Q ss_pred eEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCC---cccccc---------------cCCeE-EEE
Q psy3710 132 LHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPP---LDIAAH---------------EAPLS-CIA 192 (424)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~---~~~~~~---------------~~~v~-~~~ 192 (424)
...+-..........++++|+++.|.++-...+.|+.++.......+ ..+-+. -.... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 11221111122346789999999666546778899997664321111 111111 01233 444
Q ss_pred Ec-------cCCCEEEEEecCCcEEEEEECCCcceeeEEecc---------------------------eeeeeecCCCC
Q psy3710 193 LN-------QTGTRLATASYKGTLIRVFDTGSGQKLNELRRG---------------------------LCVLCPNSNNS 238 (424)
Q Consensus 193 ~~-------~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~---------------------------~~~~~~~~~~~ 238 (424)
.. ++|.++++-..... |+.++ .++. +.++-+. ...+++++++.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EccccccccCCCeEEEEECCCCE-EEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 44 45666666566677 99998 4553 3333211 23355566544
Q ss_pred eEEEEeecCCeEEEEeCCCC
Q psy3710 239 LLAFPGRKSGHVHLVDLADP 258 (424)
Q Consensus 239 ~~~~~~~~dg~i~i~d~~~~ 258 (424)
.++++-..+..|+.+++...
T Consensus 457 ~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEEEETTTTEEEEEEECCC
T ss_pred EEEEEeCCCCEEEEEECCCC
Confidence 55554556666777666553
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.15 E-value=1.4e-05 Score=76.50 Aligned_cols=223 Identities=10% Similarity=-0.012 Sum_probs=129.2
Q ss_pred CCeEEEEECCCCcEEEEEeecCCeEEEEecCCc-eEEEe---eccEEEEeecCC---CceeEEEeeCCCCCeeEEEeecC
Q psy3710 79 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQC---PQQLHVFETNPNPKGLCVLCPNS 151 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 151 (424)
.+.|+..++.+.+....+.....+.+++|.+.. .+..+ .+.|+.+++... ......+.... .....+++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~--~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC----CCCEECCC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC--CCcceEEEEe
Confidence 467888888777665555545567789998754 44444 578888887520 11111111111 1122456665
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEec-C-CcEEEEEECCCcceeeEEec---
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-K-GTLIRVFDTGSGQKLNELRR--- 226 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~~i~iwd~~~~~~~~~~~~--- 226 (424)
.+..|+++-...+.|.++++... .....+.........|++.|.+.+|+.+.. . +. |...++........+..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~-~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~-I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGV-KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSC-CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCC-EEBCCSSSCCCCEESCSSCS
T ss_pred eCCcEEEEeccCCeEEEEecCCC-ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCe-EEEEeCCCCCeeEEEeCCCC
Confidence 55555553566789999998753 222222222345678899997655555443 2 56 88877754322211111
Q ss_pred ceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce
Q psy3710 227 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA--AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK 304 (424)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~ 304 (424)
....++++++++.++++-...+.|..+++..... ...+. ........|++..+ .++++....+. |..++..+|+.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~ 617 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSD 617 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCc
Confidence 2467899999888888788888999999975332 11111 11223445566544 34444445566 88888877776
Q ss_pred eeee
Q psy3710 305 LNEL 308 (424)
Q Consensus 305 ~~~~ 308 (424)
+..+
T Consensus 618 ~~~i 621 (699)
T 1n7d_A 618 VNLL 621 (699)
T ss_dssp EECC
T ss_pred eEEe
Confidence 6655
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.0011 Score=56.46 Aligned_cols=182 Identities=14% Similarity=0.218 Sum_probs=105.6
Q ss_pred CCCEEEEEecCCcEEEEEECCCcceeeEEec-ceeeeeecC----CCCe--EEEEe-ec--CCeEEEEeCCCCCCCCeee
Q psy3710 196 TGTRLATASYKGTLIRVFDTGSGQKLNELRR-GLCVLCPNS----NNSL--LAFPG-RK--SGHVHLVDLADPERPPLDI 265 (424)
Q Consensus 196 ~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~----~~~~--~~~~~-~~--dg~i~i~d~~~~~~~~~~~ 265 (424)
....++.....+. +.+||+ +++.+..++. ....+.+-| .++. ++++. .. +++|.+|++.....+...+
T Consensus 39 ~~s~ii~t~k~~g-L~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSG-LVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTE-EEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CccEEEEEcCCCC-EEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 3355665666677 999999 8888888874 344444433 2222 34433 34 5899999774322223333
Q ss_pred cc------CC-CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEEECC-------CCceeeeec-----------cCCcEEE
Q psy3710 266 AA------HE-APLSCIAL--NQT-GT-RLATASYKGTLIRVFDTG-------SGQKLNELR-----------RDSSYLC 316 (424)
Q Consensus 266 ~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~~i~iwd~~-------~~~~~~~~~-----------~~~~~l~ 316 (424)
.. .. ..+..+++ +|. ++ +++....+|. +..|++. +.+.+.+|. +....|.
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~-~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGE-FEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSE-EEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCe-EEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 11 11 55677887 774 44 6888888888 9998882 335555553 3566788
Q ss_pred EEeCCCcEEEEEcccc-----ccccccccceeeeccCccccCCceeeEEeecCCCceEEEE--ecCCC-eEEEEec-cCc
Q psy3710 317 VSSDHGTVHVFSVDEA-----QKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAF--GADSN-SIIVICA-DGS 387 (424)
Q Consensus 317 ~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~-~l~~~~~-dg~ 387 (424)
.+-++.-|..++.+.. +.+.... .+. -...+..+++ .++++ ||++.+. +..
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~-------~g~-------------l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRAD-------GRH-------------LTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBS-------SSS-------------BCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEec-------CCc-------------cccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 8888766555554321 1111100 000 0113445666 56666 7777774 779
Q ss_pred EEEEEecCCccee
Q psy3710 388 YYKFMFNSKGECW 400 (424)
Q Consensus 388 v~~~~~~~~~~~~ 400 (424)
+.+|+.....+.+
T Consensus 256 ~~Vydr~~~~~~v 268 (355)
T 3amr_A 256 YAIYDRQGKNKYV 268 (355)
T ss_dssp EEEEESSTTCCEE
T ss_pred EEEEECCCCCcEE
Confidence 9999986443333
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=0.00017 Score=69.07 Aligned_cols=214 Identities=11% Similarity=0.050 Sum_probs=123.3
Q ss_pred eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCC---CCCCcccccccCCeEEEEE
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP---ERPPLDIAAHEAPLSCIAL 193 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~ 193 (424)
...|+..++. .......+.... ....+++++.+..|+++-...+.|+.+++... ......+.........|++
T Consensus 385 ~~~I~~id~~-~~~~~~~~~~~~---~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLD-RSEYTSLIPNLR---NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTT-SCCEECCSCCCT---TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred ccceEEEeCC-CCcceeeeccCc---ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 5577777764 333222222222 23456788877777774566789999998751 1222222222233567888
Q ss_pred ccCCCEE-EEEecCCcEEEEEECCCcceeeEEec---ceeeeeecCCCCeEEEEeecC-CeEEEEeCCCCCCCCeeeccC
Q psy3710 194 NQTGTRL-ATASYKGTLIRVFDTGSGQKLNELRR---GLCVLCPNSNNSLLAFPGRKS-GHVHLVDLADPERPPLDIAAH 268 (424)
Q Consensus 194 ~~~~~~l-~~~~~d~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~ 268 (424)
.+.+..| ++-...+. |.+.++........+.. ....++++|.+..++++.... +.|..+++...... ......
T Consensus 461 D~~~g~LY~tD~~~~~-I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-~l~~~~ 538 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGT-VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTEN 538 (699)
T ss_dssp CCSSSBCEECCTTTSC-EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-EESCSS
T ss_pred EeeCCcEEEEeccCCe-EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-EEEeCC
Confidence 8654444 44455677 99999875543333322 246678888888887755443 78888887653321 122222
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEEECCCCceeeeec-------c-----C-CcEEEEEeCCCcEEEEEcccccc
Q psy3710 269 EAPLSCIALNQTGTRLATASY-KGTLIRVFDTGSGQKLNELR-------R-----D-SSYLCVSSDHGTVHVFSVDEAQK 334 (424)
Q Consensus 269 ~~~v~~~~~~~~~~~l~~~~~-d~~~i~iwd~~~~~~~~~~~-------~-----~-~~~l~~~~~d~~i~iw~~~~~~~ 334 (424)
-...+.|+|+|++..|+.+.. .+. |..+++........+. | + +.++++....+.|..++..+++.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTE-EEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEE
T ss_pred CCCccEEEEeccCCEEEEEecCCCe-EEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCc
Confidence 345678999998666665554 455 9999986432221111 1 2 23444555567888888777665
Q ss_pred ccc
Q psy3710 335 INK 337 (424)
Q Consensus 335 ~~~ 337 (424)
+..
T Consensus 618 ~~~ 620 (699)
T 1n7d_A 618 VNL 620 (699)
T ss_dssp EEC
T ss_pred eEE
Confidence 443
No 303
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.90 E-value=0.021 Score=55.51 Aligned_cols=272 Identities=12% Similarity=0.068 Sum_probs=148.5
Q ss_pred ceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc
Q psy3710 12 GLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~ 91 (424)
.|.++...+++..|-.|+.+|+..++..+.+...........|.++....++...+. + ++-+.+++..+++
T Consensus 192 ~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T--------~~Gl~~~~~~~~~ 262 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-T--------DNGLYVYHNDTTP 262 (758)
T ss_dssp CEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-E--------TTEEEEECCTTSC
T ss_pred eeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-e--------CCceeEEecCCCc
Confidence 488888887776555565567888987665432212222334555555555554443 3 2468888877665
Q ss_pred EEEEEee---------cCCeEEEEecCCc-eEEEeeccEEEEeecCCCceeEEEee-----CCCCCeeEEEeecCCCCeE
Q psy3710 92 VVICLEF---------NAPVKGVRLRRDK-IVVVLEGLIKVYTFIQCPQQLHVFET-----NPNPKGLCVLCPNSNNSLL 156 (424)
Q Consensus 92 ~~~~~~~---------~~~v~~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l 156 (424)
... +.+ ...|.++...+++ ..+++++.+.++... . ....+.. ......+.++....+|.+.
T Consensus 263 ~~~-~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~Gl~~~~~~--~-~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lW 338 (758)
T 3ott_A 263 LQH-IIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYGISLSRYN--S-ALQFIPISQITGTGDGNQFYSLFRDSKGFYW 338 (758)
T ss_dssp CEE-ECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSSEEEECCC--C--CEEEEHHHHSCSCCCCBEEEEEECTTCCEE
T ss_pred EEE-EEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCcccccccC--C-ceeEEecccCCCCCCCceEEEEEEcCCCCEE
Confidence 432 221 2358888887766 666664446554322 1 1111111 1112346777777788766
Q ss_pred EEeeccCCeEEEEeCCCCCC-CCcccc-------cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEE-ec-
Q psy3710 157 AFPGRKSGHVHLVDLADPER-PPLDIA-------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL-RR- 226 (424)
Q Consensus 157 ~~~~~~dg~i~i~d~~~~~~-~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~-~~- 226 (424)
+ |..+| +..++..++.. ....+. .....|.++.-.++|+.. .|+ ++. +..+|..+++...-. ..
T Consensus 339 i--Gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt-~~G-L~~~~~~~~~~~~~~~~~~ 412 (758)
T 3ott_A 339 F--GGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLW-IAT-DGS-INRYDYATRQFIHYNIVDN 412 (758)
T ss_dssp E--EETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEE-EEE-TTE-EEEEETTTTEEEEEEEECC
T ss_pred E--eeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEE-EEe-CCc-HhhcCcCCCcEEEeecCCC
Confidence 6 55554 56666554211 111111 112458888887777644 455 456 999999876543221 11
Q ss_pred -------ceeeeeecCCCCeEEEEeecCCeEEEEeCCCC-----CCCC--eee---cc-CCCCeEEEEEcCCCCEEEEEe
Q psy3710 227 -------GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP-----ERPP--LDI---AA-HEAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 227 -------~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~-----~~~~--~~~---~~-~~~~v~~~~~~~~~~~l~~~~ 288 (424)
.+..+....++ .+.+ |+..+-+..+|..+. .... ..+ .+ ....|.++...++|++.+.++
T Consensus 413 ~~~~~~~~v~~i~~d~~g-~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~ 490 (758)
T 3ott_A 413 TGTYNTNWTYYIFEDTAG-QLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY 490 (758)
T ss_dssp C--CBSSSEEEEEECTTS-EEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred cCCCCCceEEEEEEcCCC-CEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEcc
Confidence 12233333333 3444 777777888886531 1000 011 01 234589999999988776433
Q ss_pred CCCcEEEEEECCCCcee
Q psy3710 289 YKGTLIRVFDTGSGQKL 305 (424)
Q Consensus 289 ~d~~~i~iwd~~~~~~~ 305 (424)
..+. +..+|..+++..
T Consensus 491 t~~G-l~~~d~~~~~~~ 506 (758)
T 3ott_A 491 NNKG-IDKINPRTREVT 506 (758)
T ss_dssp TCSS-EEEEETTTTEEE
T ss_pred CCCC-cEEEeCCCCceE
Confidence 3455 889998876543
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.86 E-value=0.011 Score=50.91 Aligned_cols=266 Identities=12% Similarity=0.068 Sum_probs=138.6
Q ss_pred CCceEEEEECCCCCeeEeecCCeEEEEeCCcCccccccc----ccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEE
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQD----FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIW 85 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iw 85 (424)
...+.++.|.+++..+++|....| +...+.++.-.... .+...+..+.+.+ +.+.+++ .++.|..
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g-------~~g~i~~- 103 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG-------EPPIMLH- 103 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEE-------ETTEEEE-
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEE-------CCCeEEE-
Confidence 457999999988888887765444 44444443311111 1234567777764 3444444 2455544
Q ss_pred ECCCCcEEEEEe----ecCCeEEEEecCCceEEEe--eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 86 DDLKKQVVICLE----FNAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 86 d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
....|+.-.... ++..+..+.+.+++.+++. ++. +|.....++........ ....+..+.+.+++.++++
T Consensus 104 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~--v~~S~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~- 179 (327)
T 2xbg_A 104 TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGA--IYRTKDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAV- 179 (327)
T ss_dssp ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCC--EEEESSTTSSEEEEECS-CCCCEEEEEECTTSCEEEE-
T ss_pred ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCcc--EEEEcCCCCCCEEeecC-CCcceEEEEEcCCCcEEEE-
Confidence 223344333322 2345777877666655554 443 33333234443333322 2234677888888888775
Q ss_pred eccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe-----c--ceeeee
Q psy3710 160 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-----R--GLCVLC 232 (424)
Q Consensus 160 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-----~--~~~~~~ 232 (424)
+...+..+-.|-. +..-...-......+..+.+.+++..+ .++.+|. ++..+...++.-..+. . .+..+.
T Consensus 180 g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~ 256 (327)
T 2xbg_A 180 SSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLA 256 (327)
T ss_dssp ETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEE
T ss_pred ECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEE-EEeCCce-EEEecCCCCCeeEeccCCcccCCcceEEEE
Confidence 5443333333321 111111112345678899999988655 4556777 7776433233222221 1 244556
Q ss_pred ecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec---cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEEC
Q psy3710 233 PNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA---AHEAPLSCIALNQTGTRLATASYKGTLIRVFDT 299 (424)
Q Consensus 233 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~ 299 (424)
+.+++..++ .+.+|.+ .+..+.++. -..+. .....+.++.|.+++ .+++++.+|. |.-++-
T Consensus 257 ~~~~~~~~~--~g~~g~i-~~S~DgG~t-W~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~-i~~~~~ 320 (327)
T 2xbg_A 257 YRTPNEVWL--AGGAGAL-LCSQDGGQT-WQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGI-LLRYVT 320 (327)
T ss_dssp ESSSSCEEE--EESTTCE-EEESSTTSS-CEECGGGTTSSSCCCEEEEEETT-EEEEECSTTE-EEEECC
T ss_pred ecCCCEEEE--EeCCCeE-EEeCCCCcc-cEEcCccCCCCCCeEEEEEECCC-ceEEEcCCce-EEEEcC
Confidence 666554433 3446766 344443332 22222 234567888887554 4666677887 665543
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.76 E-value=0.012 Score=49.81 Aligned_cols=194 Identities=13% Similarity=0.149 Sum_probs=117.2
Q ss_pred CeEEEEecC-CceEEEe---eccEEEEeecCCCceeEE-Eee----CCCCCeeEEEee---cCCCCeEEEeec-------
Q psy3710 101 PVKGVRLRR-DKIVVVL---EGLIKVYTFIQCPQQLHV-FET----NPNPKGLCVLCP---NSNNSLLAFPGR------- 161 (424)
Q Consensus 101 ~v~~~~~~~-~~~~~~~---~~~i~v~~~~~~~~~~~~-~~~----~~~~~~~~~~~~---~~~~~~l~~~~~------- 161 (424)
-..+++|.+ ++.+.++ .+.|..|+.. .+..... +.. .........+.+ .|+++++++ ..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~-~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv-~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPK-TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAV-MKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTT-TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEE-EEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCC-CCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEE-Ecccccccc
Confidence 345678876 4455554 7899999975 3332222 211 111224568888 688777775 33
Q ss_pred ------cCCeEEEEeCC---CCCCCCcccc--cc-----------cCCeEEEEEccCCCEEEEEecC-CcEEEEEECCCc
Q psy3710 162 ------KSGHVHLVDLA---DPERPPLDIA--AH-----------EAPLSCIALNQTGTRLATASYK-GTLIRVFDTGSG 218 (424)
Q Consensus 162 ------~dg~i~i~d~~---~~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-~~~i~iwd~~~~ 218 (424)
.+..|..||+. ++ +.+.... .. ......++..++|+..++++.. +. |...+....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg-~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~-I~rV~pdG~ 169 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENS-KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA-IARVSADGK 169 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTC-CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE-EEEECTTSC
T ss_pred cccccCCCCEEEEEcCCcCCCC-CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe-EEEEeCCCC
Confidence 26789999998 55 4433221 11 1247899999999999999888 87 777776533
Q ss_pred ceeeEEe---------cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec--cC---CCCeEEE-EEcCCCCE
Q psy3710 219 QKLNELR---------RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA--AH---EAPLSCI-ALNQTGTR 283 (424)
Q Consensus 219 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~---~~~v~~~-~~~~~~~~ 283 (424)
.+..+. .+...+++.|++..+++..+ .|.+..+|+.........+. +. -.....| ..-.+|+.
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 222221 12457899999999999777 99999999985332111111 21 1223443 33347777
Q ss_pred -EEEEeCCCcEEEEEECCC
Q psy3710 284 -LATASYKGTLIRVFDTGS 301 (424)
Q Consensus 284 -l~~~~~d~~~i~iwd~~~ 301 (424)
|++....+. +.+.+...
T Consensus 248 llV~~~~~~~-~~l~S~Dg 265 (334)
T 2p9w_A 248 VLVGARAPYA-ISFRSWDN 265 (334)
T ss_dssp EEEEEETTEE-EEEECSST
T ss_pred EEEEcCCCCE-EEEECCCC
Confidence 444555555 66665544
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.71 E-value=0.0071 Score=52.25 Aligned_cols=179 Identities=11% Similarity=0.073 Sum_probs=101.7
Q ss_pred eccEEEEeecCCCceeEEEeeCC-----CCCeeEEEeecC--CCC-eEEEeecc--CCeEEEEeCCCCCCCCc---cccc
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETNP-----NPKGLCVLCPNS--NNS-LLAFPGRK--SGHVHLVDLADPERPPL---DIAA 183 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~-~l~~~~~~--dg~i~i~d~~~~~~~~~---~~~~ 183 (424)
+|.|.++|.+........+.... .......+.+.+ ++. +|+++-.. +..|.+|+++....... .+.+
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 67788888752222222322211 111233344433 443 34442333 56888888775422222 2222
Q ss_pred c-cCCeEEEEEccCCCEEEEEe-----------------cCCcEEEEEECCCcceeeEEe---cceeeeeecCCCCeEEE
Q psy3710 184 H-EAPLSCIALNQTGTRLATAS-----------------YKGTLIRVFDTGSGQKLNELR---RGLCVLCPNSNNSLLAF 242 (424)
Q Consensus 184 ~-~~~v~~~~~~~~~~~l~~~~-----------------~d~~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (424)
. -...+.+++.++|...++.. ..+. |.-+|. ++. ..+. .-.+.++++|+++.+++
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~-vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF-VTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE-EEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEE
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE-EEEEEC--CeE-EEeecCCcccCcceECCCCCEEEE
Confidence 1 23578999999998777654 1234 555554 322 2222 23677999999999999
Q ss_pred EeecCCeEEEEeCCCCCCC--CeeeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEECC
Q psy3710 243 PGRKSGHVHLVDLADPERP--PLDIAAHEAPLSCIALNQ-TGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 243 ~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+-+..+.|+.|++...... ...+ ......-.+++++ +|++.+++..++..|..|+..
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 8888999999998743221 1122 2345677889998 588777776554214444443
No 307
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.71 E-value=0.017 Score=48.89 Aligned_cols=138 Identities=9% Similarity=0.131 Sum_probs=81.7
Q ss_pred CCCCeEEEeec-cCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEecC--------------CcEEEEEEC
Q psy3710 151 SNNSLLAFPGR-KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK--------------GTLIRVFDT 215 (424)
Q Consensus 151 ~~~~~l~~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~~i~iwd~ 215 (424)
.++..|..+.. .++.|...+.+. .....+... .+-.++++|++|+-+... .. |+..++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg--~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~-Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDG--SNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNS-LCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTS--CSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEE-EEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCC--CCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCe-EEEEeC
Confidence 35777776332 345566666554 334444322 134557889988877653 35 777888
Q ss_pred CCcceeeEEecceeeeeecCCCCeEEEEe---ecCCeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEeC-CC
Q psy3710 216 GSGQKLNELRRGLCVLCPNSNNSLLAFPG---RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY-KG 291 (424)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~ 291 (424)
...+... +... ....+++.++.++++. .....|+..++.... ...+..+.. .+++|+++.|+-.+. ..
T Consensus 96 dg~~~~~-l~~~-~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 96 NGHGSTV-LDPD-PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp TSCCCEE-EECS-CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTC
T ss_pred CCCcceE-eecC-CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCc
Confidence 7665333 2222 2236677899998865 345567777776433 333333332 456788888887665 45
Q ss_pred cEEEEEECCCCce
Q psy3710 292 TLIRVFDTGSGQK 304 (424)
Q Consensus 292 ~~i~iwd~~~~~~ 304 (424)
. |.+.++..+..
T Consensus 168 ~-Iy~~~l~g~~~ 179 (302)
T 3s25_A 168 Q-LYRYDTASQSE 179 (302)
T ss_dssp C-EEEEETTTTEE
T ss_pred e-EEEEECCCCCE
Confidence 5 88888876543
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.58 E-value=0.054 Score=51.02 Aligned_cols=276 Identities=12% Similarity=0.015 Sum_probs=149.1
Q ss_pred CceEEEEECCCCCeeEe-ecCCe-EEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECC
Q psy3710 11 NGLLYAGFNQDQGCFAC-GMEDG-FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL 88 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~-g~~~~-i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~ 88 (424)
.....+++.+.+..|.. -...+ |.+.+.+..............-..+++.|....+..+..+ ....|...++.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-----~~~~I~r~~~d 158 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-----EVPKIERAGMD 158 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-----SSCEEEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-----CCCEEEEEECC
Confidence 45778999986665554 44444 9999987544322221223345678888887777776643 14677777764
Q ss_pred CCcEEEEEe-ecCCeEEEEecCCc-eEEEe---eccEEEEeecCCCceeEEEe-eCCCCCeeEEEeecCCCCeEEEeecc
Q psy3710 89 KKQVVICLE-FNAPVKGVRLRRDK-IVVVL---EGLIKVYTFIQCPQQLHVFE-TNPNPKGLCVLCPNSNNSLLAFPGRK 162 (424)
Q Consensus 89 ~~~~~~~~~-~~~~v~~~~~~~~~-~~~~~---~~~i~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (424)
......... .-.....+++.++. .+..+ .+.|..+++. ......... ...+|. .+++..+ .++.+-..
T Consensus 159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d-G~~~~~~~~~~~~~P~---gi~~~~~--~ly~td~~ 232 (619)
T 3s94_A 159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAVVKGSLPHPF---ALTLFED--ILYWTDWS 232 (619)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS-CCEEC---------CC---CEEESSS--EEEEECTT
T ss_pred CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC-CCccEEEEeCCCCCce---EEEEeCC--EEEEecCC
Confidence 332222222 33467899999754 44444 4578888875 222211122 122232 3344433 55554666
Q ss_pred CCeEEEEeCCCCCCCCccccc-----------cc--------------CCeEEEEE-----------ccCC---------
Q psy3710 163 SGHVHLVDLADPERPPLDIAA-----------HE--------------APLSCIAL-----------NQTG--------- 197 (424)
Q Consensus 163 dg~i~i~d~~~~~~~~~~~~~-----------~~--------------~~v~~~~~-----------~~~~--------- 197 (424)
.+.|...|..++.. ...+.. |. +....+++ .|.|
T Consensus 233 ~~~V~~~d~~tg~~-~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~ 311 (619)
T 3s94_A 233 THSILACNKYTGEG-LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT 311 (619)
T ss_dssp TCSEEEEESSSCCC-CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSC
T ss_pred CCEEEEEECCCCcc-cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcc
Confidence 77888888765521 111100 00 00111111 1111
Q ss_pred -----C-EEEEEecCCcEEEEEECCCcceee-EEe----cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec
Q psy3710 198 -----T-RLATASYKGTLIRVFDTGSGQKLN-ELR----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA 266 (424)
Q Consensus 198 -----~-~l~~~~~d~~~i~iwd~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~ 266 (424)
+ +|+.+ ..+. |+..++....... .++ .....+.+++.++.++++-...+.|+.+++..... ...+.
T Consensus 312 C~~~~~~~Ll~~-~~~~-i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v~~ 388 (619)
T 3s94_A 312 CKDGATELLLLA-RRTD-LRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFVVT 388 (619)
T ss_dssp BCSSCSEEEEEE-ESSC-EEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC
T ss_pred cCCCCceEEEEE-cccc-eEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEEEE
Confidence 1 23322 3344 6767776543211 111 12456778888888888777788999999876432 22222
Q ss_pred cCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEEECCCC
Q psy3710 267 AHEAPLSCIALNQTGTRLATA-SYKGTLIRVFDTGSG 302 (424)
Q Consensus 267 ~~~~~v~~~~~~~~~~~l~~~-~~d~~~i~iwd~~~~ 302 (424)
..-.....+++++.+..|+.+ +..+. |.+.++...
T Consensus 389 ~~~~~p~GlAvD~~~~~lY~tD~~~~~-I~v~~~~G~ 424 (619)
T 3s94_A 389 AQIAHPDGIAVDWVARNLYWTDTGTDR-IEVTRLNGT 424 (619)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred CCCCCcCceEEecccCcEEEEeCCCCc-EEEEeCCCC
Confidence 333567889999755555544 45566 999988754
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.57 E-value=0.009 Score=50.50 Aligned_cols=154 Identities=8% Similarity=0.096 Sum_probs=100.4
Q ss_pred EEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCccccc----cc--CCeEEEEE---ccCCCEEEEEec-----------
Q psy3710 146 VLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA----HE--APLSCIAL---NQTGTRLATASY----------- 205 (424)
Q Consensus 146 ~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~----~~--~~v~~~~~---~~~~~~l~~~~~----------- 205 (424)
+..|++....+.++.-..+.|..||...+......+.. .. ..+..|.| .|+++++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 45777766666663557899999998753211112221 11 13579999 688777775432
Q ss_pred --CCcEEEEEECC---CcceeeEEec----------------ceeeeeecCCCCeEEEEeecC-CeEEEEeCCCCCCCCe
Q psy3710 206 --KGTLIRVFDTG---SGQKLNELRR----------------GLCVLCPNSNNSLLAFPGRKS-GHVHLVDLADPERPPL 263 (424)
Q Consensus 206 --d~~~i~iwd~~---~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~ 263 (424)
+.. |..+|+. +++.+..... ...-++..++|+.++. ++.. +.|..++.........
T Consensus 97 ~g~~~-v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt-~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 97 HGASS-FHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA-FALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp SSCCE-EEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE-EEESSCEEEEECTTSCCEEEE
T ss_pred CCCCE-EEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe-CCCCCCeEEEEeCCCCEEeee
Confidence 567 9999998 7777655441 2456788888877765 6666 7777777664321111
Q ss_pred ee----ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCC
Q psy3710 264 DI----AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 302 (424)
Q Consensus 264 ~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 302 (424)
.+ .......+.|+++|+|+.|++....+. +..+|+.+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCC
Confidence 11 112234679999999998888877888 999997743
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.39 E-value=0.046 Score=46.36 Aligned_cols=184 Identities=9% Similarity=0.025 Sum_probs=86.9
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec--CCeEEEEecCCceEEEe------eccEEEEeecCCCceeEE
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN--APVKGVRLRRDKIVVVL------EGLIKVYTFIQCPQQLHV 134 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~------~~~i~v~~~~~~~~~~~~ 134 (424)
.+.+++.+|.. ....+.+||..+++-...-..+ ..-.++....+..+++. -..+.+||.. +.+. ..
T Consensus 11 ~~~l~~~GG~~----~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W-~~ 84 (306)
T 3ii7_A 11 HDYRIALFGGS----QPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSW-YS 84 (306)
T ss_dssp CCEEEEEECCS----STTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEE-EE
T ss_pred cceEEEEeCCC----CCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeE-EE
Confidence 35666676643 2468999999887654322211 11123333344444443 1467788875 3322 22
Q ss_pred EeeCCCCC-eeEEEeecCCCCeEEEeeccC------CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEec-
Q psy3710 135 FETNPNPK-GLCVLCPNSNNSLLAFPGRKS------GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASY- 205 (424)
Q Consensus 135 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~d------g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~- 205 (424)
+.....+. ...+... +++.+++ |+.+ ..+.+||..+..- .+..+...... .+++. -+++.++.|+.
T Consensus 85 ~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~ 159 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAA--EGKIYTS-GGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVE-ANGLIYVCGGSL 159 (306)
T ss_dssp EECCSSCCBSCEEEEE--TTEEEEE-CCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEECCEE
T ss_pred CCCCCccccceeEEEE--CCEEEEE-CCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEE-ECCEEEEECCCC
Confidence 22222121 1222222 5666666 7655 4688899876410 00001101111 11222 25566666653
Q ss_pred --------CCcEEEEEECCCcceeeE--Eeccee-eeeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 206 --------KGTLIRVFDTGSGQKLNE--LRRGLC-VLCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 206 --------d~~~i~iwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
-.. +.+||+.+.+-... ++.+.. ..+...++ .+++.|+.+ ..+.+||+.+.+
T Consensus 160 ~~~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 160 GNNVSGRVLNS-CEVYDPATETWTELCPMIEARKNHGLVFVKD-KIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp SCTTTCEECCC-EEEEETTTTEEEEECCCSSCCBSCEEEEETT-EEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCCcccccce-EEEeCCCCCeEEECCCccchhhcceEEEECC-EEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 345 88999987643222 221111 11111233 444445543 468889987753
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.37 E-value=0.06 Score=46.72 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=74.1
Q ss_pred eeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcE--EEEEe----ecCCeEEEEecCC----ce-EEEee-----
Q psy3710 54 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV--VICLE----FNAPVKGVRLRRD----KI-VVVLE----- 117 (424)
Q Consensus 54 i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~--~~~~~----~~~~v~~~~~~~~----~~-~~~~~----- 117 (424)
-..+++.|+++.+++ . .++.|.+++ +++. +..+. .......++++|+ +. +++..
T Consensus 33 P~~ia~~pdG~l~V~-e-------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-E-------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp EEEEEECTTSCEEEE-E-------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred ceEEEEcCCCeEEEE-e-------CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 457899999985444 3 258999998 4432 22221 1356899999998 43 44332
Q ss_pred --ccEEEEeecCCCc-----e-eEEEee-CCCCCeeEEEeecCCCCeEEEeecc------------CCeEEEEeCCCCC-
Q psy3710 118 --GLIKVYTFIQCPQ-----Q-LHVFET-NPNPKGLCVLCPNSNNSLLAFPGRK------------SGHVHLVDLADPE- 175 (424)
Q Consensus 118 --~~i~v~~~~~~~~-----~-~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~------------dg~i~i~d~~~~~- 175 (424)
+.|..|+.. ... . +..+.. .........+.+.|||.+.++.|.. .|.|.-++.+..-
T Consensus 103 ~~~~v~r~~~~-~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 103 LRNQVVRLRHL-GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp SEEEEEEEEEC-SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred CccEEEEEEeC-CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 667778775 221 1 111221 0111123467889999766653321 2567666665310
Q ss_pred -----------CCCcccccccCCeEEEEEcc-CCCEEEE
Q psy3710 176 -----------RPPLDIAAHEAPLSCIALNQ-TGTRLAT 202 (424)
Q Consensus 176 -----------~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 202 (424)
.......++ .....++|+| ++.++++
T Consensus 182 ~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEE
T ss_pred CCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEE
Confidence 011111123 2356889999 5554444
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.35 E-value=0.06 Score=46.21 Aligned_cols=229 Identities=12% Similarity=0.081 Sum_probs=113.3
Q ss_pred CCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEee-----cCCeEEEEecCCceEEEe-eccEEEEee
Q psy3710 52 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-----NAPVKGVRLRRDKIVVVL-EGLIKVYTF 125 (424)
Q Consensus 52 ~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~-~~~i~v~~~ 125 (424)
..+..+.+...+..++ ++ .++.|. .....|+.-..... ...+.++.+.++..+++. .+. +|..
T Consensus 36 ~~~~~v~~~~~~~~~~-~G-------~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~--i~~S 104 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VG-------VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPI--MLHT 104 (327)
T ss_dssp SCEEEEEESSSSCEEE-EE-------TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTE--EEEE
T ss_pred CcEEEEEECCCCcEEE-Ec-------CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCe--EEEE
Confidence 3566777765555555 45 246553 33333433222221 336788999875555444 343 3333
Q ss_pred cCCCceeEEEeeC-CCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCCEEEEEe
Q psy3710 126 IQCPQQLHVFETN-PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 126 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
...++........ ..+.....+.+.+++..+++ + .+|.|.. ..+.+..-......+...+..+++.|++.+++.+.
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~ 181 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMI-T-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS 181 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEE-E-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEE-e-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC
Confidence 3234443333321 11223555666666666654 4 4554432 12222111112223456788999999887776654
Q ss_pred cCCcEEEEEEC--CCcceeeEE-ecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC--CCeee-ccCCCCeEEEEEc
Q psy3710 205 YKGTLIRVFDT--GSGQKLNEL-RRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER--PPLDI-AAHEAPLSCIALN 278 (424)
Q Consensus 205 ~d~~~i~iwd~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~-~~~~~~v~~~~~~ 278 (424)
++...+-.|- .+-+.+... ......+.+.+++..++ .+.+|.+++.+...++. ....- ..+...+.++++.
T Consensus 182 -~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~--~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 182 -RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM--IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp -TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE--EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred -CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE--EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 4441444442 222322111 12345566677765443 45678877764221110 01100 0123458899999
Q ss_pred CCCCEEEEEeCCCcEEEEEECC
Q psy3710 279 QTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 279 ~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+++..++.+. ++. | .+...
T Consensus 259 ~~~~~~~~g~-~g~-i-~~S~D 277 (327)
T 2xbg_A 259 TPNEVWLAGG-AGA-L-LCSQD 277 (327)
T ss_dssp SSSCEEEEES-TTC-E-EEESS
T ss_pred CCCEEEEEeC-CCe-E-EEeCC
Confidence 8877666554 665 5 34443
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.28 E-value=0.04 Score=46.61 Aligned_cols=227 Identities=9% Similarity=0.015 Sum_probs=104.7
Q ss_pred CCCeeEeec-CC------eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc--
Q psy3710 21 DQGCFACGM-ED------GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-- 91 (424)
Q Consensus 21 ~g~~la~g~-~~------~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~-- 91 (424)
++.+++.|+ .+ .+.+||..+.+-......+........... ++.+.+.++.... ..-..+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~-~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYDGR-SRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSS-CBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCCCC-ccCceEEEEECCCCCCC
Confidence 455666665 22 288999877654332222222222222333 3455555553211 123578999988876
Q ss_pred -EEEEEe--ecCCeEEEEecCCceEEEe-------eccEEEEeecCCCceeEEEeeCCCCCe-eEEEeecCCCCeEEEee
Q psy3710 92 -VVICLE--FNAPVKGVRLRRDKIVVVL-------EGLIKVYTFIQCPQQLHVFETNPNPKG-LCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 92 -~~~~~~--~~~~v~~~~~~~~~~~~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 160 (424)
-...-. ....-.++....+..+++. ...+.+||.. +.+- ..+.....+.. ..+... +++.+++ |
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-G 166 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPN-IDQW-SMLGDMQTAREGAGLVVA--SGVIYCL-G 166 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETT-TTEE-EEEEECSSCCBSCEEEEE--TTEEEEE-C
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCC-CCeE-EECCCCCCCcccceEEEE--CCEEEEE-C
Confidence 333222 1111222333333344432 1357888875 3322 22222222211 222222 5666666 7
Q ss_pred ccC-----CeEEEEeCCCCCCC-CcccccccCCeEEEEEccCCCEEEEEecC-----CcEEEEEECCCcceeeE--Eecc
Q psy3710 161 RKS-----GHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQKLNE--LRRG 227 (424)
Q Consensus 161 ~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~~~~~--~~~~ 227 (424)
+.+ ..+.+||+.+..-. +..+......-..+.+ +++.++.|+.+ .. +.+||+.+.+-... ++.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEEECCCSSC
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCcEEECCCCCCc
Confidence 654 46888998764100 0001111111122222 56677777654 45 89999987653322 1111
Q ss_pred e-eeeeecCCCCeEEEEeecC-----CeEEEEeCCCC
Q psy3710 228 L-CVLCPNSNNSLLAFPGRKS-----GHVHLVDLADP 258 (424)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~ 258 (424)
. ...+...++ .+++.|+.+ ..+.+||+.+.
T Consensus 244 r~~~~~~~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 244 RCYVGATVLRG-RLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CBSCEEEEETT-EEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ccceeEEEECC-EEEEEcCcCCCcccccEEEEcCCCC
Confidence 1 111111233 344445544 45777887654
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.21 E-value=0.026 Score=57.14 Aligned_cols=197 Identities=16% Similarity=0.225 Sum_probs=120.1
Q ss_pred EEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC-CcEEE
Q psy3710 16 AGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVI 94 (424)
Q Consensus 16 ~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~-~~~~~ 94 (424)
.-.+|..+.+|.-....+.|||+++...+..... ...|..=.|. +.+.++.++ +..|.-|++.. ..+++
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWi-s~~~l~lVT--------~~aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQPVK 140 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEec-CCCeeEEEc--------CCeEEEeccCCCCccHH
Confidence 3467888888877655599999999888777776 3455444444 456677777 57999999963 23333
Q ss_pred EEe-e----cCCeEEEEecCCceEEEe----------eccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEe
Q psy3710 95 CLE-F----NAPVKGVRLRRDKIVVVL----------EGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFP 159 (424)
Q Consensus 95 ~~~-~----~~~v~~~~~~~~~~~~~~----------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 159 (424)
.+. | ...|..-..+++..+++. .|.+.+|+.+ .+..+.+++|.....-..+.-++....+++.
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e--r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc--cccchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 333 2 345666677788766552 5889999985 3444445555432211111112222222221
Q ss_pred ecc---CCeEEEEeCCCC--CCCCc------ccc---cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe
Q psy3710 160 GRK---SGHVHLVDLADP--ERPPL------DIA---AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225 (424)
Q Consensus 160 ~~~---dg~i~i~d~~~~--~~~~~------~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 225 (424)
+.. .+.++|-++... ..+.. .+. .-.+-..++..++.-..+...+.-|. +.++|+.++.++..-+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhcc
Confidence 222 368888888543 11111 010 12334456777777778888888998 9999999998876544
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.20 E-value=0.056 Score=45.65 Aligned_cols=174 Identities=9% Similarity=0.038 Sum_probs=80.9
Q ss_pred CCeEEEEECCCCcEEEEEeec--CCeEEEEecCCceEEEe-------eccEEEEeecCCCc--eeEEEeeCCCCC-eeEE
Q psy3710 79 NNRVMIWDDLKKQVVICLEFN--APVKGVRLRRDKIVVVL-------EGLIKVYTFIQCPQ--QLHVFETNPNPK-GLCV 146 (424)
Q Consensus 79 d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~-------~~~i~v~~~~~~~~--~~~~~~~~~~~~-~~~~ 146 (424)
-..+.++|..+++-...-..+ ..-.++....+..+++. ...+.+||.. +.+ ....+.....+. ...+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~-~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYT-ADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT-CCTTCCCEEECCCSSCCBSCEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECC-CCCCCeeEECCCCCCCccceeE
Confidence 357889998877644322211 11123333344444443 1468888875 333 022222111111 1122
Q ss_pred EeecCCCCeEEEeeccC-----CeEEEEeCCCCCCC-CcccccccCCeEEEEEccCCCEEEEEecC-----CcEEEEEEC
Q psy3710 147 LCPNSNNSLLAFPGRKS-----GHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDT 215 (424)
Q Consensus 147 ~~~~~~~~~l~~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~ 215 (424)
... +++.+++ |+.+ ..+.+||..+..-. +..+...... .+++. .+++.++.|+.+ .. +.+||+
T Consensus 109 ~~~--~~~lyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~-~~~~d~ 182 (301)
T 2vpj_A 109 TTL--GDMIYVS-GGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-AGLVV-ASGVIYCLGGYDGLNILNS-VEKYDP 182 (301)
T ss_dssp EEE--TTEEEEE-CCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCC-EEEEET
T ss_pred EEE--CCEEEEE-cccCCCcccceEEEEcCCCCeEEECCCCCCCccc-ceEEE-ECCEEEEECCCCCCcccce-EEEEeC
Confidence 222 5666665 6643 36888898764100 0011111111 12222 256677777654 45 889998
Q ss_pred CCcceeeE--EecceeeeeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 216 GSGQKLNE--LRRGLCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 216 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
.+.+-... ++.+....+....+..+++.|+.+ ..+.+||+.+.+
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 183 HTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 77643322 221111111111134555556653 568899987654
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.18 E-value=0.085 Score=44.55 Aligned_cols=211 Identities=10% Similarity=0.073 Sum_probs=116.1
Q ss_pred EeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeecCCeEEEEecCCceEEEe----e-------------ccEE
Q psy3710 59 MLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL----E-------------GLIK 121 (424)
Q Consensus 59 ~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~-------------~~i~ 121 (424)
++++++.+.+.... .++.|...+..... ...+.- ..+ --+++++..+.. + ..|+
T Consensus 21 ~~~~g~~iy~~n~~-----d~~~ly~~~~dg~~-~~~l~~-~~~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy 91 (302)
T 3s25_A 21 FCESDGEVFFSNTN-----DNGRLYAMNIDGSN-IHKLSN-DTA--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLC 91 (302)
T ss_dssp EEEETTEEEEEEGG-----GTTEEEEEETTSCS-CEEEEE-EEE--EEEEECSSEEEEEEECC------CCSSCCSEEEE
T ss_pred EEEeCCEEEEEeCC-----CCceEEEEcCCCCC-CEEccC-Cce--eeEEEcCCEEEEEECCCCcccccceeccCCCeEE
Confidence 34677888777643 25677777764333 333331 112 234556544443 1 2344
Q ss_pred EEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEee---ccCCeEEEEeCCCCCCCCcccccccCCeEEEEEccCCC
Q psy3710 122 VYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPG---RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT 198 (424)
Q Consensus 122 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 198 (424)
..++. +.....+.... ...++++++.|+.+. .....|...++.. .....+..+.. .+++++++
T Consensus 92 ~i~~d--g~~~~~l~~~~------~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG--s~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 92 RIKRN--GHGSTVLDPDP------CIYASLIGNYIYYLHYDTQTATSLYRIRIDG--EEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp EEETT--SCCCEEEECSC------EEEEEEETTEEEEEEESSSSCEEEEEEETTS--CCCEEEESSCC----CCSEEETT
T ss_pred EEeCC--CCcceEeecCC------ccEEEEeCCEEEEEeecCCCCceEEEEECCC--CCeEEEeCCCc----eEeeEECC
Confidence 44543 33333333221 124566888998833 2334555555554 33444444432 45678888
Q ss_pred EEEEEec-CCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecC-CeEEEEeCCCCCCCCeeeccCCCCeEEEE
Q psy3710 199 RLATASY-KGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKS-GHVHLVDLADPERPPLDIAAHEAPLSCIA 276 (424)
Q Consensus 199 ~l~~~~~-d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 276 (424)
.|+-.+. ... |...++..+.....+..... ..+.|.++.++++...+ ..|..-++..... ..+. ...+ ..
T Consensus 158 ~iy~t~~g~~~-Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~--~~Lt--~~~~--~~ 229 (302)
T 3s25_A 158 YFYYNNPKNGQ-LYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP--VVLT--EANI--EH 229 (302)
T ss_dssp EEEEECTTTCC-EEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC--EECS--CSCE--EE
T ss_pred EEEEEeCCCce-EEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe--EEEe--CCCc--ce
Confidence 8886665 566 88888876655444443332 34668999998865444 4677777776542 2222 2233 34
Q ss_pred EcCCCCEEEEEeC--CCcEEEEEECCC
Q psy3710 277 LNQTGTRLATASY--KGTLIRVFDTGS 301 (424)
Q Consensus 277 ~~~~~~~l~~~~~--d~~~i~iwd~~~ 301 (424)
|+|++++|+.++. ... |..-++..
T Consensus 230 ~~~~g~~Iy~~~~~~~~~-i~~~~~DG 255 (302)
T 3s25_A 230 YNVYGSLIFYQRGGDNPA-LCVVKNDG 255 (302)
T ss_dssp EEEETTEEEEEECSSSCE-EEEEETTS
T ss_pred EEECCCEEEEEECCCCcE-EEEEECCC
Confidence 7888888876533 233 66666653
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.17 E-value=0.09 Score=46.03 Aligned_cols=149 Identities=13% Similarity=0.220 Sum_probs=92.0
Q ss_pred eEEEeeccEEEEeecCCCceeEEEeeCC--CCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCc----------
Q psy3710 112 IVVVLEGLIKVYTFIQCPQQLHVFETNP--NPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPL---------- 179 (424)
Q Consensus 112 ~~~~~~~~i~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~---------- 179 (424)
.+++.++.||.-++. .....+.+.... .-..+..+..+|+|.+||.. .+..|.|..+..+.....
T Consensus 35 i~~a~~n~iR~~~i~-~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~--g~~~V~Vv~LP~~~~~~~~~~~~~~~q~ 111 (452)
T 3pbp_A 35 IVFIQDNIIRWYNVL-TDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF--NDNEIFVMEVPWGYSNVEDVSIQDAFQI 111 (452)
T ss_dssp EEEEETTEEEEEETT-TCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE--CSSEEEEEECCTTCSCCCCHHHHHTTEE
T ss_pred EEEEECCEEEEEECC-CCCcceEEecCcccccCceeEEEECCCCCEEEEe--cCCeEEEEEecCccccCcccccccccce
Confidence 333447788888875 233455555542 11135668889999999983 455888888874321111
Q ss_pred -cccc------ccCCeEEEEEccC---CCEEEEEecCCcEEEEEECCCcc--eeeEEecceeeeeecCCCCeEEEEeecC
Q psy3710 180 -DIAA------HEAPLSCIALNQT---GTRLATASYKGTLIRVFDTGSGQ--KLNELRRGLCVLCPNSNNSLLAFPGRKS 247 (424)
Q Consensus 180 -~~~~------~~~~v~~~~~~~~---~~~l~~~~~d~~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d 247 (424)
.+.- ...+|..+.|+|- +..|++-..|+. |++||+.... +. .++.. .+
T Consensus 112 ~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~---------~~--------- 171 (452)
T 3pbp_A 112 FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKP---------NN--------- 171 (452)
T ss_dssp EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCC---------CS---------
T ss_pred eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhcc---------cc---------
Confidence 1111 2577999999994 568999999999 9999997632 11 22110 00
Q ss_pred CeEEEEeCCCCCCCCeeeccCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEEE
Q psy3710 248 GHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS--YKGTLIRVFD 298 (424)
Q Consensus 248 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~~i~iwd 298 (424)
...+......|.+++|.+++-.|...+ ..|. |+-.-
T Consensus 172 --------------~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GD-IYAlc 209 (452)
T 3pbp_A 172 --------------SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGD-IFAFY 209 (452)
T ss_dssp --------------EEESCSSCCCEEEEEECTTSSCEEEEECTTSCE-EEEES
T ss_pred --------------ccCCCcccceEEEEEEcCCCcEEEEEecCCCCC-EEEEC
Confidence 001113446788999999887666654 6676 55443
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.16 E-value=0.096 Score=45.87 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=90.9
Q ss_pred ECCCCCeeEeecCCeEEEEeCCcCccccccccc----CCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCc--
Q psy3710 18 FNQDQGCFACGMEDGFRIYNCDPLKEKERQDFT----DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-- 91 (424)
Q Consensus 18 ~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~-- 91 (424)
...+|..++.+.++.||.-++.+.........+ -..+..+..+|+|++||+++ +.+|.|-.+..+.
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--------~~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--------DNEIFVMEVPWGYSN 99 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--------SSEEEEEECCTTCSC
T ss_pred EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--------CCeEEEEEecCcccc
Confidence 355677777777777888887654332222222 23577899999999999998 6899998876321
Q ss_pred ----------EEEEEee-------cCCeEEEEecCCc----eEEE-e-eccEEEEeecCCC-ceeEEEeeC-------CC
Q psy3710 92 ----------VVICLEF-------NAPVKGVRLRRDK----IVVV-L-EGLIKVYTFIQCP-QQLHVFETN-------PN 140 (424)
Q Consensus 92 ----------~~~~~~~-------~~~v~~~~~~~~~----~~~~-~-~~~i~v~~~~~~~-~~~~~~~~~-------~~ 140 (424)
..+.+.. ..+|..+.|+|-+ .+++ . |+.|++||+.... ++. .++.. ..
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~ 178 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDAR 178 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSS
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcc
Confidence 1233431 3679999999865 2333 2 8999999996422 222 33211 11
Q ss_pred CCeeEEEeecCCCCeEEEeec--cCCeEEEE
Q psy3710 141 PKGLCVLCPNSNNSLLAFPGR--KSGHVHLV 169 (424)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~--~dg~i~i~ 169 (424)
...+.+++|.+++-.|.+ .. +.|.|+-.
T Consensus 179 ~~ev~S~~Fg~~~lTLYv-l~~t~~GDIYAl 208 (452)
T 3pbp_A 179 VNDITDLEFSKDGLTLYC-LNTTEGGDIFAF 208 (452)
T ss_dssp CCCEEEEEECTTSSCEEE-EECTTSCEEEEE
T ss_pred cceEEEEEEcCCCcEEEE-EecCCCCCEEEE
Confidence 244678888887765554 44 77887654
No 319
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.14 E-value=0.21 Score=48.46 Aligned_cols=262 Identities=11% Similarity=0.114 Sum_probs=142.4
Q ss_pred CCceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCC
Q psy3710 10 KNGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK 89 (424)
Q Consensus 10 ~~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~ 89 (424)
...|.++.-..+| .|-+|+.+|+..||..+.+...........|..+.. .++ .+-+++ .+.+..+|..+
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt--------~~Gl~~~~~~~ 130 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGA--------LNGLYTYQLQS 130 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEE--------TTEEEEEETTT
T ss_pred CceEEEEEEcCCC-cEEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEc--------CCcceeEeCCC
Confidence 3568898877776 566666788999997765432211111234554433 333 444444 24788899877
Q ss_pred CcEEEEEe------ecCCeEEEEecCCc-eEEEeeccEEEEeecCCCceeEEEeeCC----CCCeeEEEeecCCCCeEEE
Q psy3710 90 KQVVICLE------FNAPVKGVRLRRDK-IVVVLEGLIKVYTFIQCPQQLHVFETNP----NPKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 90 ~~~~~~~~------~~~~v~~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~ 158 (424)
++... +. ....|.++...+++ .++++.+.+..++.. ..+ ...+.... ....+.++...+++..|-+
T Consensus 131 ~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~-~~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi 207 (758)
T 3ott_A 131 RKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPS-NGK-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI 207 (758)
T ss_dssp CCEEE-ECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETT-TTE-EEEECCCCCTTCSSCCEEEEEEETTTTEEEE
T ss_pred CeEEE-eccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccC-CCc-eEEecCCCccccccceeEEEEEECCCCEEEE
Confidence 66433 31 13468888887666 555566567778764 322 22222111 1123667777766665444
Q ss_pred eeccCCeEEEEeCCCCCCCCcccc-cccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe----------cc
Q psy3710 159 PGRKSGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR----------RG 227 (424)
Q Consensus 159 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~----------~~ 227 (424)
|.. +-+..+|..+. . ...+. .....|.++...++|.+.+ |+. +. +.+++..+++...-.. ..
T Consensus 208 -gt~-~Gl~~~~~~~~-~-~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 280 (758)
T 3ott_A 208 -GTE-GYLFQYFPSTG-Q-IKQTEAFHNNSIKSLALDGNGDLLA-GTD-NG-LYVYHNDTTPLQHIIHDSRNIQSLTNNI 280 (758)
T ss_dssp -EEE-EEEEEEETTTT-E-EEEEEEEEEEEEEEEEECTTCCEEE-EET-TE-EEEECCTTSCCEEECCCTTCTTSCSCSC
T ss_pred -EEC-CCCeEEcCCCC-e-EEeccCCCCCeEEEEEEcCCCCEEE-EeC-Cc-eeEEecCCCcEEEEEcCCCCcCcCCcCe
Confidence 554 46788887653 2 22111 1234588888877776554 444 45 8999987654322111 01
Q ss_pred eeeeeecCCCCeEEEEeecCCeEEEEeCCCCCCCCeeec-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECC
Q psy3710 228 LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA-------AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTG 300 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~ 300 (424)
+..+....++... + |+..| +.++.... . ...+. .....|.++.-.++|.+.+. +.+| +..++..
T Consensus 281 i~~i~~D~~g~lW-i-GT~~G-l~~~~~~~-~--~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G--l~~~~~~ 351 (758)
T 3ott_A 281 IWNIFADQEHNIW-L-GTDYG-ISLSRYNS-A--LQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG--LIRFTDP 351 (758)
T ss_dssp EEEEEECTTCCEE-E-EESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE--EEEESCT
T ss_pred EEEEEEcCCCCEE-E-EeCCc-ccccccCC-c--eeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc--ceeeccc
Confidence 3444444444433 3 66666 55443321 1 11110 12346888888888765544 4444 6777655
Q ss_pred C
Q psy3710 301 S 301 (424)
Q Consensus 301 ~ 301 (424)
+
T Consensus 352 ~ 352 (758)
T 3ott_A 352 A 352 (758)
T ss_dssp T
T ss_pred c
Confidence 4
No 320
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.0053 Score=52.54 Aligned_cols=112 Identities=12% Similarity=0.127 Sum_probs=72.6
Q ss_pred CEEEEEecCCcEEEEEECCCcceeeEEecc--eeeeeec----CCCCeEEEEe-ecCCeEEEEeCCCCCCCCee-ec--c
Q psy3710 198 TRLATASYKGTLIRVFDTGSGQKLNELRRG--LCVLCPN----SNNSLLAFPG-RKSGHVHLVDLADPERPPLD-IA--A 267 (424)
Q Consensus 198 ~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~-~~dg~i~i~d~~~~~~~~~~-~~--~ 267 (424)
..++.++.||. |.-+|..+|+..-+++.. ...+... +.+..+++.. +.||.|+.++..++...... .. .
T Consensus 11 ~~V~v~t~dG~-l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGG-LHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSC-EEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCe-EEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 47888999999 999999999999888765 1122111 1123444433 68999999998876422110 00 1
Q ss_pred CCCCeEE---EEE-c----CCCCEEEEEeCCCcEEEEEECCCCceeeeeccC
Q psy3710 268 HEAPLSC---IAL-N----QTGTRLATASYKGTLIRVFDTGSGQKLNELRRD 311 (424)
Q Consensus 268 ~~~~v~~---~~~-~----~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~ 311 (424)
...++.. ... . ..+..+++++.++. +...|+++|+.++++...
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTT
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecC
Confidence 1222221 001 0 14568899999999 999999999999998744
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.00 E-value=0.097 Score=44.20 Aligned_cols=229 Identities=11% Similarity=0.086 Sum_probs=104.2
Q ss_pred CCCeeEeecCC-----eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEE
Q psy3710 21 DQGCFACGMED-----GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVIC 95 (424)
Q Consensus 21 ~g~~la~g~~~-----~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 95 (424)
++.+++.|+.+ .+..||..+.+-......+........... ++.+.+.+|.... ..-..+.+||..+.+-...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGS-LRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSS-SBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCC-ccccceEEECCCCCceeeC
Confidence 34455555432 288899877654322222222222222222 4556566553211 1235788999887764432
Q ss_pred Eee--cCCeEEEEecCCceEEEe--e-----ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccC---
Q psy3710 96 LEF--NAPVKGVRLRRDKIVVVL--E-----GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKS--- 163 (424)
Q Consensus 96 ~~~--~~~v~~~~~~~~~~~~~~--~-----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d--- 163 (424)
-.. ...-.+++...+..+++. + ..+.+||+. +.+ ...+.....+....+.+. -+++.+++ |+.+
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~-~~~~iyv~-GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIK-SNE-WFHVAPMNTRRSSVGVGV-VGGLLYAV-GGYDVAS 168 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETT-TTE-EEEECCCSSCCBSCEEEE-ETTEEEEE-CCEETTT
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCC-CCe-EeecCCCCCcccCceEEE-ECCEEEEE-eCCCCCC
Confidence 221 111223333344444443 1 357778875 332 222222222221112221 24566665 6543
Q ss_pred ----CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEecC-----CcEEEEEECCCcceeeE--Eecce-ee
Q psy3710 164 ----GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQKLNE--LRRGL-CV 230 (424)
Q Consensus 164 ----g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~~~~~--~~~~~-~~ 230 (424)
..+.+||+.+..- .+..+...... .+++.. +++.++.|+.+ .. +.+||+.+.+-... ++... ..
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSG-AGVGVL-NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEECCBSSSSBCCC-EEEEETTTTEEEEECCCSSCCBSC
T ss_pred CccccEEEEEeCCCCcEEECCCCcccccc-ccEEEE-CCEEEEECCCCCCcccce-EEEEeCCCCCEeeCCCCCCccccC
Confidence 4588899876410 00011111111 122222 56777777654 35 88999987643321 11111 11
Q ss_pred eeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 231 LCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 231 ~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
.+...++ .+++.|+.+ ..+.+||+.+.+
T Consensus 246 ~~~~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 246 GVCAVNG-LLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEETT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eEEEECC-EEEEECCcCCCcccccEEEEcCCCCe
Confidence 1111233 444446544 358888887643
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.94 E-value=0.11 Score=43.94 Aligned_cols=230 Identities=13% Similarity=0.090 Sum_probs=104.2
Q ss_pred CCCCCeeEeecC-----CeEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCc---CCCcCCCeEEEEECCCC
Q psy3710 19 NQDQGCFACGME-----DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGT---HPKYPNNRVMIWDDLKK 90 (424)
Q Consensus 19 s~~g~~la~g~~-----~~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~---~~~~~d~~i~iwd~~~~ 90 (424)
.-++.+++.|+. +.+.+||..+.+-......+........... ++.+.+.+|.. ........+.++|..+.
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 335666666662 2288999877655332222222222222222 45555555431 00011356889998877
Q ss_pred cEEEEEee--cCCeEEEEecCCceEEEe-------eccEEEEeecCCCceeEEEeeCCCCC-eeEEEeecCCCCeEEEee
Q psy3710 91 QVVICLEF--NAPVKGVRLRRDKIVVVL-------EGLIKVYTFIQCPQQLHVFETNPNPK-GLCVLCPNSNNSLLAFPG 160 (424)
Q Consensus 91 ~~~~~~~~--~~~v~~~~~~~~~~~~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 160 (424)
+-...-.. ...-.++....+..+++. ...+.+||.. +.+ ...+.....+. ...+... +++.+++ |
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~-G 175 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPE-RDE-WHLVAPMLTRRIGVGVAVL--NRLLYAV-G 175 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETT-TTE-EEECCCCSSCCBSCEEEEE--TTEEEEE-C
T ss_pred eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCC-CCe-EeECCCCCccccceEEEEE--CCEEEEE-e
Confidence 54432221 111122333333344442 1467888875 332 22221111111 1122222 5566666 7
Q ss_pred ccC-----CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEecC-----CcEEEEEECCCcceee--EEecc
Q psy3710 161 RKS-----GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQKLN--ELRRG 227 (424)
Q Consensus 161 ~~d-----g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~~~~--~~~~~ 227 (424)
+.+ ..+.+||+.+..- .+..+......-..+.+ +++.++.|+.+ .. +.+||+.+.+-.. .++.+
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEECCCCSSC
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEECCCCCCC
Confidence 654 4588899876410 00011111111122222 56677777654 45 8999998764322 12211
Q ss_pred ee-eeeecCCCCeEEEEeecC-----CeEEEEeCCCC
Q psy3710 228 LC-VLCPNSNNSLLAFPGRKS-----GHVHLVDLADP 258 (424)
Q Consensus 228 ~~-~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~ 258 (424)
.. ..+...+ ..+++.|+.+ ..+.+||+.+.
T Consensus 253 r~~~~~~~~~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 253 RSALGITVHQ-GRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CBSCEEEEET-TEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ccceEEEEEC-CEEEEEcCcCCCcccceEEEEcCCCC
Confidence 11 1111123 3444445533 45777777654
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.92 E-value=0.15 Score=44.03 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=81.0
Q ss_pred eEEEEEccCCCEEEEE------------ecCCcEEEEEECCCc--cee-eEEec--------ceeeeeecC--CCC-eEE
Q psy3710 188 LSCIALNQTGTRLATA------------SYKGTLIRVFDTGSG--QKL-NELRR--------GLCVLCPNS--NNS-LLA 241 (424)
Q Consensus 188 v~~~~~~~~~~~l~~~------------~~d~~~i~iwd~~~~--~~~-~~~~~--------~~~~~~~~~--~~~-~~~ 241 (424)
...++..|+|..++++ ..+|. |.++|..+. +.. ..+.+ ....+.+.+ ++. .++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~-I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGK-ILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCE-EEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCe-EEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 3466677776555554 26888 999998742 211 12222 122333333 344 455
Q ss_pred EEeec--CCeEEEEeCCCCCCCCe---eecc-CCCCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEEE
Q psy3710 242 FPGRK--SGHVHLVDLADPERPPL---DIAA-HEAPLSCIALNQTGTRLATASY-----------------KGTLIRVFD 298 (424)
Q Consensus 242 ~~~~~--dg~i~i~d~~~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~~i~iwd 298 (424)
++... +.+|.+|++........ .+.+ .-...+.+++.++|.+.++... .|. |.-+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~-vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF-VTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE-EEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE-EEEEE
Confidence 54333 56788888766432222 2222 2345789999999988777541 244 55555
Q ss_pred CCCCceee---------eeccCCcEEEEEe-CCCcEEEEEccc
Q psy3710 299 TGSGQKLN---------ELRRDSSYLCVSS-DHGTVHVFSVDE 331 (424)
Q Consensus 299 ~~~~~~~~---------~~~~~~~~l~~~~-~d~~i~iw~~~~ 331 (424)
..+-+.+. .++||++.|..+. ..+.|..|++..
T Consensus 210 ~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 210 PNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 53222221 3679998776654 578899999864
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.91 E-value=0.15 Score=43.04 Aligned_cols=224 Identities=11% Similarity=0.050 Sum_probs=105.5
Q ss_pred CCeeEeecCC---eEEEEeCCcCcccccccccCCCeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEee
Q psy3710 22 QGCFACGMED---GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF 98 (424)
Q Consensus 22 g~~la~g~~~---~i~iw~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 98 (424)
+.+++.|+.+ .+.+||..+.+-......+........... ++.+.+.+|.. ...-..+.+||..+++-...-..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-DNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-TTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-CCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCC
Confidence 3445566543 399999887665332222222222222233 44455555532 11246889999988765433222
Q ss_pred c--CCeEEEEecCCceEEEe--e------ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc------
Q psy3710 99 N--APVKGVRLRRDKIVVVL--E------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK------ 162 (424)
Q Consensus 99 ~--~~v~~~~~~~~~~~~~~--~------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 162 (424)
+ ..-.++....+..+++. + ..+.+||.. +.+ ...+.....+....+... -+++.+++ |+.
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r~~~~~~~-~~~~iyv~-GG~~~~~~~ 164 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTR-TES-WHTKPSMLTQRCSHGMVE-ANGLIYVC-GGSLGNNVS 164 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETT-TTE-EEEECCCSSCCBSCEEEE-ETTEEEEE-CCEESCTTT
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCC-CCc-eEeCCCCcCCcceeEEEE-ECCEEEEE-CCCCCCCCc
Confidence 1 11123333344444443 2 357888875 332 222222111111111121 25566665 654
Q ss_pred ---CCeEEEEeCCCCCCCCcccccc--cCCeEEEEEccCCCEEEEEecC-----CcEEEEEECCCcceee--EEecc---
Q psy3710 163 ---SGHVHLVDLADPERPPLDIAAH--EAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQKLN--ELRRG--- 227 (424)
Q Consensus 163 ---dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~~~~--~~~~~--- 227 (424)
...+.+||+.+.. -..+... ...-.++... +++.++.|+.+ .. +.+||+.+.+-.. .++.+
T Consensus 165 ~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~ 240 (306)
T 3ii7_A 165 GRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDN-VEYYDIKLNEWKMVSPMPWKGVT 240 (306)
T ss_dssp CEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCC-EEEEETTTTEEEECCCCSCCBSC
T ss_pred ccccceEEEeCCCCCe--EEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCce-EEEeeCCCCcEEECCCCCCCccc
Confidence 3458889987641 1111110 0111122222 56677776643 35 8899998764222 12211
Q ss_pred eeeeeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 228 LCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
.....+ +..+++.|+.+ ..+.+||+.+.+
T Consensus 241 ~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 241 VKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 111222 34455556643 568888887643
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.90 E-value=0.18 Score=43.68 Aligned_cols=103 Identities=14% Similarity=0.079 Sum_probs=57.2
Q ss_pred CceEEEEECCCCCeeEeecCCeEEEEeCCcCccc--ccc---cccCCCeeeEEEecc---CceEEEEeCCcCCCcCCCeE
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEK--ERQ---DFTDGGLGHVEMLFR---CNYLALVGGGTHPKYPNNRV 82 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~--~~~---~~~~~~i~~~~~~~~---~~~l~~~~~~~~~~~~d~~i 82 (424)
..-..++|.|+|+++++-..+.|++++ .++.. ... .........+++.|+ +..+.++...... ...+.|
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-GLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-SSEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-CCccEE
Confidence 345789999999977766554488888 23221 101 111345677889887 5555444321000 001578
Q ss_pred EEEECCCCcE-----EE-EEee----cCCeEEEEecCCceEEEe
Q psy3710 83 MIWDDLKKQV-----VI-CLEF----NAPVKGVRLRRDKIVVVL 116 (424)
Q Consensus 83 ~iwd~~~~~~-----~~-~~~~----~~~v~~~~~~~~~~~~~~ 116 (424)
..++...+.. +. .+.. ......++|.||+.+.++
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 8888764421 11 1211 123468999999966665
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.84 E-value=0.13 Score=43.50 Aligned_cols=132 Identities=14% Similarity=0.188 Sum_probs=68.1
Q ss_pred CCCEEEEEecCC-----cEEEEEECCCcceeeE--Eecceee-eeecCCCCeEEEEeec-------CCeEEEEeCCCCCC
Q psy3710 196 TGTRLATASYKG-----TLIRVFDTGSGQKLNE--LRRGLCV-LCPNSNNSLLAFPGRK-------SGHVHLVDLADPER 260 (424)
Q Consensus 196 ~~~~l~~~~~d~-----~~i~iwd~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~-------dg~i~i~d~~~~~~ 260 (424)
+++.++.|+.++ . +.+||+.+.+-... ++.+... .+...++ .+++.|+. ...+.+||+.+..-
T Consensus 108 ~~~iyv~GG~~~~~~~~~-~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSS-VEAYNIKSNEWFHVAPMNTRRSSVGVGVVGG-LLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEE-EEEEETTTTEEEEECCCSSCCBSCEEEEETT-EEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCce-EEEEeCCCCeEeecCCCCCcccCceEEEECC-EEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566777777553 4 77889877643322 1211111 1111234 44444543 34688999887541
Q ss_pred CC-eeeccCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEECCCCceeee--e----------ccCCcEEEEEeCCC
Q psy3710 261 PP-LDIAAHEAPLSCIALNQTGTRLATASYKG-----TLIRVFDTGSGQKLNE--L----------RRDSSYLCVSSDHG 322 (424)
Q Consensus 261 ~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~~i~iwd~~~~~~~~~--~----------~~~~~~l~~~~~d~ 322 (424)
.. ..+.........+.+ ++++++.|+.++ . +.+||+.+.+-... + ..++++++.|+.++
T Consensus 186 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDG 262 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCC
Confidence 10 011111111122222 567777777643 5 88999987643221 1 12556666666543
Q ss_pred -----cEEEEEcccc
Q psy3710 323 -----TVHVFSVDEA 332 (424)
Q Consensus 323 -----~i~iw~~~~~ 332 (424)
.+.+||+.+.
T Consensus 263 ~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 263 SCNLASVEYYNPTTD 277 (302)
T ss_dssp SSBCCCEEEEETTTT
T ss_pred CcccccEEEEcCCCC
Confidence 4777777663
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.80 E-value=0.12 Score=43.90 Aligned_cols=177 Identities=13% Similarity=0.063 Sum_probs=82.4
Q ss_pred eccEEEEeecCCCceeEEEeeC-CCCCeeEEEeecCCCCeEEEeecc-----------CCeEEEEeCCCCCC-CCccccc
Q psy3710 117 EGLIKVYTFIQCPQQLHVFETN-PNPKGLCVLCPNSNNSLLAFPGRK-----------SGHVHLVDLADPER-PPLDIAA 183 (424)
Q Consensus 117 ~~~i~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~-----------dg~i~i~d~~~~~~-~~~~~~~ 183 (424)
...+.+||.. +.+-. ..... ..+..-.+++ ..++..+++ |+. ...+..||..+..- .+..+..
T Consensus 12 G~~~~~yd~~-~~~W~-~~~~~~p~~r~~~~~~-~~~~~iyv~-GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 87 (315)
T 4asc_A 12 EEGAVAYDPA-ANECY-CASLSSQVPKNHVSLV-TKENQVFVA-GGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS 87 (315)
T ss_dssp TTEEEEEETT-TTEEE-EEECCCCSCSSEEEEE-CTTCCEEEE-EEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS
T ss_pred CCceEEECCC-CCeEe-cCCCCCCCCccceEEE-EECCEEEEE-cCcccCCCCCccccccceEEecCCCCeEEECCCCCc
Confidence 5678888875 33322 22211 1122222222 346666666 663 12377888876410 0001111
Q ss_pred ccCCeEEEEEccCCCEEEEEecC--------CcEEEEEECCCccee--eEEeccee-eeeecCCCCeEEEEeec------
Q psy3710 184 HEAPLSCIALNQTGTRLATASYK--------GTLIRVFDTGSGQKL--NELRRGLC-VLCPNSNNSLLAFPGRK------ 246 (424)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~d--------~~~i~iwd~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~------ 246 (424)
.... .+++.. +++.++.|+.+ .. +.+||..+.+-. ..++.+.. ..+...++ .+++.|+.
T Consensus 88 ~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~-~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 88 PRCL-FGLGEA-LNSIYVVGGREIKDGERCLDS-VMCYDRLSFKWGESDPLPYVVYGHTVLSHMD-LVYVIGGKGSDRKC 163 (315)
T ss_dssp CEES-CEEEEE-TTEEEEECCEESSTTCCBCCC-EEEEETTTTEEEECCCCSSCCBSCEEEEETT-EEEEECCBCTTSCB
T ss_pred chhc-eeEEEE-CCEEEEEeCCcCCCCCcccce-EEEECCCCCcEeECCCCCCcccceeEEEECC-EEEEEeCCCCCCcc
Confidence 0111 122222 55666777642 45 889998876422 22222211 11122334 44444654
Q ss_pred CCeEEEEeCCCCCCC-CeeeccCCCCeEEEEEcCCCCEEEEEeCCCc----EEEEEECCCCc
Q psy3710 247 SGHVHLVDLADPERP-PLDIAAHEAPLSCIALNQTGTRLATASYKGT----LIRVFDTGSGQ 303 (424)
Q Consensus 247 dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----~i~iwd~~~~~ 303 (424)
-..+.+||..+.+-. ...+......-..+.+ +++.++.|+.++. .+.+||+.+.+
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 247899998875410 1111111111122222 6677777776542 18889998764
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.038 Score=47.30 Aligned_cols=174 Identities=14% Similarity=0.082 Sum_probs=94.8
Q ss_pred eEEEeeccCCeEEEEeCCCCCCCCcccccc-cCCeEEEEE--cc-CCCEEEEE-ecCCcEEEEEECCCcceeeEEecc--
Q psy3710 155 LLAFPGRKSGHVHLVDLADPERPPLDIAAH-EAPLSCIAL--NQ-TGTRLATA-SYKGTLIRVFDTGSGQKLNELRRG-- 227 (424)
Q Consensus 155 ~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~l~~~-~~d~~~i~iwd~~~~~~~~~~~~~-- 227 (424)
.+++ ++.||.|.-+|..++ +..-.+... ..++....- .+ ++..++.. +.||. |..++..+|.....+..+
T Consensus 12 ~V~v-~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~-l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 12 ILIA-ADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGN-IYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEE-EETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTE-EEEEETTTEEEEEEEEHHHH
T ss_pred EEEE-EeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCE-EEEEECCCCcEEeeeccccc
Confidence 4555 888888888888776 433333322 122222110 01 22333333 58999 999999888655544432
Q ss_pred e--eeeeec-------C---CCCeEEEEeecCCeEEEEeCCCCCCCCeeeccCC-CC-----eEEEEEc-----CCCCEE
Q psy3710 228 L--CVLCPN-------S---NNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHE-AP-----LSCIALN-----QTGTRL 284 (424)
Q Consensus 228 ~--~~~~~~-------~---~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~-----v~~~~~~-----~~~~~l 284 (424)
+ ..+... + .....+++|+.+|.+...|+++++.....-.+.. .. ..|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1 001110 0 1344566799999999999999874322111110 10 1111110 123567
Q ss_pred EEEeCCCcEEEEEECCCCceeeeec--------------------cCCcEEEEEeCCCcEEEEEccccccc
Q psy3710 285 ATASYKGTLIRVFDTGSGQKLNELR--------------------RDSSYLCVSSDHGTVHVFSVDEAQKI 335 (424)
Q Consensus 285 ~~~~~d~~~i~iwd~~~~~~~~~~~--------------------~~~~~l~~~~~d~~i~iw~~~~~~~~ 335 (424)
+.+..+.. +.+.+ ++|+ ++.++ .++.+ +.++.||.|.-+|..+|+.+
T Consensus 169 ~ig~~~y~-v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 169 VIGKTIFE-LGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp EEEEEEEE-CEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEE
T ss_pred EEecceEE-EEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEE
Confidence 77777776 77766 4554 33221 23555 55788999999999887754
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.77 E-value=0.23 Score=43.03 Aligned_cols=227 Identities=13% Similarity=0.050 Sum_probs=115.9
Q ss_pred cCCeEEEEecCCceEEEe--eccEEEEeecCCCc-eeEEEee-CCCCCeeEEEeecCC---CCeEEEeecc---C----C
Q psy3710 99 NAPVKGVRLRRDKIVVVL--EGLIKVYTFIQCPQ-QLHVFET-NPNPKGLCVLCPNSN---NSLLAFPGRK---S----G 164 (424)
Q Consensus 99 ~~~v~~~~~~~~~~~~~~--~~~i~v~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~l~~~~~~---d----g 164 (424)
-.....++|.|++.++++ ++.|.+++. .++ .+..+.. .........++++|+ +..|.++-.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~--~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISP--SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECS--SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeC--CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 346789999999987777 578888863 343 2221111 112244678899997 5555552221 3 5
Q ss_pred eEEEEeCCCCCCC------C-cccc-cccCCeEEEEEccCCCEEEEEec-------------CCcEEEEEECCCc-----
Q psy3710 165 HVHLVDLADPERP------P-LDIA-AHEAPLSCIALNQTGTRLATASY-------------KGTLIRVFDTGSG----- 218 (424)
Q Consensus 165 ~i~i~d~~~~~~~------~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------d~~~i~iwd~~~~----- 218 (424)
.|..|+....... + ..+. ........++|.|+|.+.++.+. .+. |.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~-I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGK-ILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSE-EEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeE-EEEEcCCCCCCCCC
Confidence 6777776643101 1 1111 11123467999999987666432 144 555554321
Q ss_pred ----ceeeEEe-cceeeeeecCCCCeEEEEeec-C--CeEEEEeCCC--------C-------CCCCeeeccCCCCeEEE
Q psy3710 219 ----QKLNELR-RGLCVLCPNSNNSLLAFPGRK-S--GHVHLVDLAD--------P-------ERPPLDIAAHEAPLSCI 275 (424)
Q Consensus 219 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-d--g~i~i~d~~~--------~-------~~~~~~~~~~~~~v~~~ 275 (424)
..+.... .....++++++...++++-.. + ..|.+..... + ..+...+.........+
T Consensus 185 pf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp SSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 0111111 124568888854445543222 2 1344433211 0 01222221123457888
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEEECCCC-cee--eeecc--CCcEE-EEEeCCCcEEEEEc
Q psy3710 276 ALN-------QTGTRLATASYKGTLIRVFDTGSG-QKL--NELRR--DSSYL-CVSSDHGTVHVFSV 329 (424)
Q Consensus 276 ~~~-------~~~~~l~~~~~d~~~i~iwd~~~~-~~~--~~~~~--~~~~l-~~~~~d~~i~iw~~ 329 (424)
+|. .+|.++++.-..+. |...++... +.. ..+-. .++.. +..+.||.|++-+-
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 883 46766666555666 888888753 221 22321 12211 22345777777664
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.72 E-value=0.22 Score=42.12 Aligned_cols=184 Identities=9% Similarity=0.040 Sum_probs=84.3
Q ss_pred CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEeec--CCeEEEEecCCceEEEe-e----------ccEEEEeecCCC
Q psy3710 63 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN--APVKGVRLRRDKIVVVL-E----------GLIKVYTFIQCP 129 (424)
Q Consensus 63 ~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~-~----------~~i~v~~~~~~~ 129 (424)
++.+++.+|... ..-..+.++|..+++-...-..+ ..-.+++...+..++.. . ..+.+||.. +.
T Consensus 24 ~~~i~v~GG~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~-~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFR--QSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM-TN 100 (308)
T ss_dssp CCCEEEECCBSS--SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT-TT
T ss_pred CCEEEEEeCcCC--CCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC-CC
Confidence 344555554210 12357889998877644321111 11123333333344432 1 357778874 32
Q ss_pred ceeEEEeeCCCCC-eeEEEeecCCCCeEEEeeccC-----CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEE
Q psy3710 130 QQLHVFETNPNPK-GLCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLAT 202 (424)
Q Consensus 130 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~d-----g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~ 202 (424)
+ ...+.....+. ....... +++.+++ |+.+ ..+.+||..+..- .+..+......-..+.+ +++.++.
T Consensus 101 ~-W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 101 Q-WSPCAPMSVPRNRIGVGVI--DGHIYAV-GGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp E-EEECCCCSSCCBTCEEEEE--TTEEEEE-CCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred e-EeECCCCCcCccccEEEEE--CCEEEEE-cCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE
Confidence 2 22222111111 1112222 5666666 6643 4678888876410 00011111111122222 5667777
Q ss_pred EecC-----CcEEEEEECCCcceee--EEecc---eeeeeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 203 ASYK-----GTLIRVFDTGSGQKLN--ELRRG---LCVLCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 203 ~~~d-----~~~i~iwd~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
|+.+ .. +.+||+.+.+-.. .++.+ ...+.+ +..+++.|+.+ ..+.+||+.+.+
T Consensus 175 GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 175 GGFDGTNRLNS-AECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCBCSSCBCCC-EEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCCcCce-EEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 7654 45 8899987764322 11111 111122 34455546553 568899987653
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.58 E-value=0.29 Score=41.59 Aligned_cols=171 Identities=8% Similarity=0.069 Sum_probs=79.6
Q ss_pred CeEEEEECCCCcEEEEEeec----CCeEEEEecCCceEEEee-------------ccEEEEeecCCCceeEEEeeCCCCC
Q psy3710 80 NRVMIWDDLKKQVVICLEFN----APVKGVRLRRDKIVVVLE-------------GLIKVYTFIQCPQQLHVFETNPNPK 142 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~-------------~~i~v~~~~~~~~~~~~~~~~~~~~ 142 (424)
..+..||..+++-.. ...+ ..-.+++...+..+++.. ..+.+||.. +.+ ...+.....+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~-W~~~~~~p~~r 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSE-WLGMPPLPSPR 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTE-EEECCCBSSCE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCe-EEECCCCCcch
Confidence 579999998887543 2221 222334444444444331 126677764 322 22222211111
Q ss_pred eeEEEeecCCCCeEEEeeccC--------CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEec-C-----C
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKS--------GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASY-K-----G 207 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~d--------g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~ 207 (424)
.-.+.+.. +++.+++ |+.+ ..+.+||..+..- .+..+...... .+++. -+++.++.|+. + .
T Consensus 90 ~~~~~~~~-~~~lyv~-GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~ 165 (315)
T 4asc_A 90 CLFGLGEA-LNSIYVV-GGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLN 165 (315)
T ss_dssp ESCEEEEE-TTEEEEE-CCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCC
T ss_pred hceeEEEE-CCEEEEE-eCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccc
Confidence 11112211 4555665 6643 4588889876410 00011111111 12222 35667777776 2 3
Q ss_pred cEEEEEECCCcceee--EEeccee-eeeecCCCCeEEEEeecCC-----eEEEEeCCCCC
Q psy3710 208 TLIRVFDTGSGQKLN--ELRRGLC-VLCPNSNNSLLAFPGRKSG-----HVHLVDLADPE 259 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~dg-----~i~i~d~~~~~ 259 (424)
. +.+||..+.+-.. .++.+.. ..+...++ .+++.|+.++ .+.+||+.+.+
T Consensus 166 ~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 166 K-MCVYDPKKFEWKELAPMQTARSLFGATVHDG-RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp C-EEEEETTTTEEEECCCCSSCCBSCEEEEETT-EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred e-EEEEeCCCCeEEECCCCCCchhceEEEEECC-EEEEEeccCCCCccceEEEEECCCCe
Confidence 5 8899988764322 2221111 11112234 4544465543 58889987753
No 332
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.57 E-value=0.33 Score=42.08 Aligned_cols=101 Identities=9% Similarity=-0.056 Sum_probs=57.0
Q ss_pred CceEEEEECCCCCeeEeecCCeEEEEeCCcCc-ccccc---cccCCCeeeEEEecc---CceEEEEeCC-cCCCcCC---
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDGFRIYNCDPLK-EKERQ---DFTDGGLGHVEMLFR---CNYLALVGGG-THPKYPN--- 79 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~-~~~~~---~~~~~~i~~~~~~~~---~~~l~~~~~~-~~~~~~d--- 79 (424)
..-..++|.|+|+++++-..+.|++++. .++ .+... .........+++.|+ +..+.++... . .+
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~----~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA----EGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC----GGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC----CCCCc
Confidence 3467899999998777666544888873 333 11110 111345678899887 4444443310 0 12
Q ss_pred -CeEEEEECCCC--c-----EE-EEEee--cCCeEEEEecCCceEEEe
Q psy3710 80 -NRVMIWDDLKK--Q-----VV-ICLEF--NAPVKGVRLRRDKIVVVL 116 (424)
Q Consensus 80 -~~i~iwd~~~~--~-----~~-~~~~~--~~~v~~~~~~~~~~~~~~ 116 (424)
..|..++...+ . .+ ..+.. ......++|.||+.+.++
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 56777776543 1 11 11221 123567999999976665
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.51 E-value=0.36 Score=41.85 Aligned_cols=139 Identities=11% Similarity=0.036 Sum_probs=75.6
Q ss_pred eEEEeecCCCC-eEEEeeccCCeEEEEeCCCCC-CCCccc----ccccCCeEEEEEccC---CCEEEEEe-c-------C
Q psy3710 144 LCVLCPNSNNS-LLAFPGRKSGHVHLVDLADPE-RPPLDI----AAHEAPLSCIALNQT---GTRLATAS-Y-------K 206 (424)
Q Consensus 144 ~~~~~~~~~~~-~l~~~~~~dg~i~i~d~~~~~-~~~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~-------d 206 (424)
...+++.|+++ +++ +...|.|++++..... ..+..+ .........|+++|+ +..|+.+. . .
T Consensus 20 P~~i~~~pdG~~l~V--~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 20 PWALAFLPDNHGMLI--TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp EEEEEECSTTCCEEE--EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred cEEEEEcCCCCEEEE--EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46788999998 555 4667999999854321 111111 122345689999995 44554443 2 2
Q ss_pred CcEEEEEECCCc--c--eee----EEec-----c-eeeeeecCCCCeEEEEeec------------CCeEEEEeCCCCCC
Q psy3710 207 GTLIRVFDTGSG--Q--KLN----ELRR-----G-LCVLCPNSNNSLLAFPGRK------------SGHVHLVDLADPER 260 (424)
Q Consensus 207 ~~~i~iwd~~~~--~--~~~----~~~~-----~-~~~~~~~~~~~~~~~~~~~------------dg~i~i~d~~~~~~ 260 (424)
.. |..++.... + ... .++. | ...+.+.|++..++..|.. .|.|.-++....-.
T Consensus 98 ~~-v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 98 TA-VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EE-EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eE-EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 24 666665432 1 111 1111 1 3468899988555544332 35777777754210
Q ss_pred -----------CCeee-ccCCCCeEEEEEcC-CCCEEEE
Q psy3710 261 -----------PPLDI-AAHEAPLSCIALNQ-TGTRLAT 286 (424)
Q Consensus 261 -----------~~~~~-~~~~~~v~~~~~~~-~~~~l~~ 286 (424)
....+ .++ .....++|+| +|+++++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 11111 123 3467899999 5554443
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.14 E-value=0.46 Score=41.12 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=20.9
Q ss_pred EEEEECCCCceee--ee----------ccCCcEEEEEeCCC------cEEEEEcccccc
Q psy3710 294 IRVFDTGSGQKLN--EL----------RRDSSYLCVSSDHG------TVHVFSVDEAQK 334 (424)
Q Consensus 294 i~iwd~~~~~~~~--~~----------~~~~~~l~~~~~d~------~i~iw~~~~~~~ 334 (424)
+.+||+.+.+-.. .+ ..++++++.|+.++ .+.++++++++.
T Consensus 287 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 287 TDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp CEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred EEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 7789988654222 11 12566777777542 355556666544
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.64 E-value=0.93 Score=38.91 Aligned_cols=101 Identities=11% Similarity=0.047 Sum_probs=58.2
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCccccc------ccccCCCeeeEEEecc---CceEE-EEeCCcCCCcCC
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKER------QDFTDGGLGHVEMLFR---CNYLA-LVGGGTHPKYPN 79 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~------~~~~~~~i~~~~~~~~---~~~l~-~~~~~~~~~~~d 79 (424)
..-..|+|.|||+++++-...+ |++++.+.++.... .....+....+++.|+ +..+. +.+.. .+
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-----~~ 106 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-----SD 106 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-----SS
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-----CC
Confidence 4567899999999888777455 88888654443111 1112456778899885 33333 33322 24
Q ss_pred CeEEEEECCCC----------cEEE-EEe--ecCCeEEEEecCCceEEEe
Q psy3710 80 NRVMIWDDLKK----------QVVI-CLE--FNAPVKGVRLRRDKIVVVL 116 (424)
Q Consensus 80 ~~i~iwd~~~~----------~~~~-~~~--~~~~v~~~~~~~~~~~~~~ 116 (424)
+.|.-|....+ +.+. .+. .......+.|.||+.+.++
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 56666665431 1111 121 1234467999999865554
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.36 E-value=1.5 Score=39.45 Aligned_cols=106 Identities=13% Similarity=0.060 Sum_probs=58.0
Q ss_pred CceEEEEECCCCCeeEeecCCe-EEEEeCCcCcccccccc--------cCCCeeeEEEecc---CceEEEEeCCcCCCc-
Q psy3710 11 NGLLYAGFNQDQGCFACGMEDG-FRIYNCDPLKEKERQDF--------TDGGLGHVEMLFR---CNYLALVGGGTHPKY- 77 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la~g~~~~-i~iw~~~~~~~~~~~~~--------~~~~i~~~~~~~~---~~~l~~~~~~~~~~~- 77 (424)
..-..|+|.|+|+++++-...+ |++++...++....... ..+....+++.|+ +..+.++.....+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3567899999999888877665 88887554433111111 2355668999985 555444431100000
Q ss_pred -----CCCeEEEEECCCC--c-----EEEE-Ee--ecCCeEEEEecCCceEEEe
Q psy3710 78 -----PNNRVMIWDDLKK--Q-----VVIC-LE--FNAPVKGVRLRRDKIVVVL 116 (424)
Q Consensus 78 -----~d~~i~iwd~~~~--~-----~~~~-~~--~~~~v~~~~~~~~~~~~~~ 116 (424)
....|.-++...+ + .+.. +. .......++|.||+.+.++
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 0135555554321 1 1111 11 1245788999999866554
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.15 E-value=1.4 Score=37.98 Aligned_cols=73 Identities=12% Similarity=0.046 Sum_probs=36.3
Q ss_pred CCCeeEeecCCe--EEEEeCCc--Cccccccccc-CCCeeeEEEeccCceEEEEeCCcC----CCcCCCeEEEEECCCCc
Q psy3710 21 DQGCFACGMEDG--FRIYNCDP--LKEKERQDFT-DGGLGHVEMLFRCNYLALVGGGTH----PKYPNNRVMIWDDLKKQ 91 (424)
Q Consensus 21 ~g~~la~g~~~~--i~iw~~~~--~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~~~~----~~~~d~~i~iwd~~~~~ 91 (424)
++++++.|+.++ +.+||..+ .+-......+ ...........+ +.+.+.+|... ....-..+.+||..+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 666777765444 99999864 3222222222 222222222333 45555554310 00113578899988776
Q ss_pred EEE
Q psy3710 92 VVI 94 (424)
Q Consensus 92 ~~~ 94 (424)
-..
T Consensus 98 W~~ 100 (357)
T 2uvk_A 98 WVK 100 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 338
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.13 E-value=0.93 Score=35.82 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=61.7
Q ss_pred eeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcccccccCCe--------EEEEEccCCCEEEEEecCCcEEEEEE
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPL--------SCIALNQTGTRLATASYKGTLIRVFD 214 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~l~~~~~d~~~i~iwd 214 (424)
.+..++++|++.+.++ .+|.+.-.+..+. .. ..+.+....| .++.|.|+|.+.++ .||. |+-++
T Consensus 42 ~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~-~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~-iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV---LNDKIYKGTPPTH-DN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK-LYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE---ETTEEEEESCCCS-TT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTE-EEEES
T ss_pred cceeEEECCCccEEEE---eCCeEEEECCCCC-Cc-ccccccccEecccccccceEEEECCCCCEEEe--CCCE-EEEeC
Confidence 3558899998885553 7777777666543 22 2222223333 78999999977776 5688 88777
Q ss_pred CCCccee------eEEe----cceeeeeecCCCCeEEEEeecCCeEEE
Q psy3710 215 TGSGQKL------NELR----RGLCVLCPNSNNSLLAFPGRKSGHVHL 252 (424)
Q Consensus 215 ~~~~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~dg~i~i 252 (424)
-.+.... ..+- ..+..+.+.|++...++. ++.++-
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~---dg~lyr 158 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH---GQQFYK 158 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE---TTEEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe---CCcEEe
Confidence 6432111 1111 246788889999888763 777544
No 339
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.11 E-value=1.5 Score=37.94 Aligned_cols=106 Identities=8% Similarity=-0.060 Sum_probs=54.7
Q ss_pred CceEEEEECCCCC-eeEeecCCeEEEEeCCcCcc--cccc----cccCCCeeeEEEecc---CceEEEEeCCcCCC-cCC
Q psy3710 11 NGLLYAGFNQDQG-CFACGMEDGFRIYNCDPLKE--KERQ----DFTDGGLGHVEMLFR---CNYLALVGGGTHPK-YPN 79 (424)
Q Consensus 11 ~~V~~~~~s~~g~-~la~g~~~~i~iw~~~~~~~--~~~~----~~~~~~i~~~~~~~~---~~~l~~~~~~~~~~-~~d 79 (424)
..-..|+|.|+|+ ++++-..+.|++++.+.... +... ....+....+++.|+ +..+.++....... ...
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3467899999999 66655544488888532211 1101 112345677899885 44444432110000 001
Q ss_pred CeEEEEECCCC--c--EEEEE-e-ec------CCeEEEEecCCceEEEe
Q psy3710 80 NRVMIWDDLKK--Q--VVICL-E-FN------APVKGVRLRRDKIVVVL 116 (424)
Q Consensus 80 ~~i~iwd~~~~--~--~~~~~-~-~~------~~v~~~~~~~~~~~~~~ 116 (424)
..|..++...+ + ....+ . .+ .....++|.||+.+.++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA 146 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE
Confidence 35666665432 1 11111 1 11 22467999999966665
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.02 E-value=1.4 Score=37.28 Aligned_cols=170 Identities=9% Similarity=0.110 Sum_probs=77.0
Q ss_pred CeEEEEECCCCcEEEEEeec----CCeEEEEecCCceEEEee------c-------cEEEEeecCCCceeEEEeeCCCCC
Q psy3710 80 NRVMIWDDLKKQVVICLEFN----APVKGVRLRRDKIVVVLE------G-------LIKVYTFIQCPQQLHVFETNPNPK 142 (424)
Q Consensus 80 ~~i~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~------~-------~i~v~~~~~~~~~~~~~~~~~~~~ 142 (424)
..+..||..+++-.. .... ..-.+++...+..+++.. + .+.+||.. +. ....+.....+.
T Consensus 24 ~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~-~W~~~~~~p~~r 100 (318)
T 2woz_A 24 TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV-SS-EWVGLPPLPSAR 100 (318)
T ss_dssp SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT-TT-EEEECSCBSSCB
T ss_pred cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC-CC-cEEECCCCCccc
Confidence 358899998887654 2221 222344444444444331 1 15666764 22 222222211111
Q ss_pred eeEEEeecCCCCeEEEeeccC-------CeEEEEeCCCCCCCCcccccccCC--eEEEEEccCCCEEEEEec------CC
Q psy3710 143 GLCVLCPNSNNSLLAFPGRKS-------GHVHLVDLADPERPPLDIAAHEAP--LSCIALNQTGTRLATASY------KG 207 (424)
Q Consensus 143 ~~~~~~~~~~~~~l~~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~------d~ 207 (424)
...+++.. +++.+++ |+.+ ..+.+||..+.. -..+.....+ -.+++. .+++.++.|+. -.
T Consensus 101 ~~~~~~~~-~~~iyv~-GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 101 CLFGLGEV-DDKIYVV-AGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp CSCEEEEE-TTEEEEE-EEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCC
T ss_pred cccceEEE-CCEEEEE-cCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccc
Confidence 11111211 4566665 6654 357888887641 1111000000 011222 35666677764 24
Q ss_pred cEEEEEECCCcceeeE--Eeccee-eeeecCCCCeEEEEeecC-----CeEEEEeCCCCC
Q psy3710 208 TLIRVFDTGSGQKLNE--LRRGLC-VLCPNSNNSLLAFPGRKS-----GHVHLVDLADPE 259 (424)
Q Consensus 208 ~~i~iwd~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~ 259 (424)
. +.+||+.+.+-... ++.+.. ..+...++ .+++.|+.+ ..+.+||+.+.+
T Consensus 176 ~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 176 R-VFIYNPKKGDWKDLAPMKTPRSMFGVAIHKG-KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp C-EEEEETTTTEEEEECCCSSCCBSCEEEEETT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred e-EEEEcCCCCEEEECCCCCCCcccceEEEECC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence 5 88999987643222 221111 11112234 444445432 357789988754
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.02 E-value=1.5 Score=37.63 Aligned_cols=225 Identities=11% Similarity=0.041 Sum_probs=113.2
Q ss_pred CeeeEEEeccCceEEEEeCCcCCCcCCCeEEEEECCCCcEEEE--Ee-----ecCCeEEEEecCC----ce-EEEe----
Q psy3710 53 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVIC--LE-----FNAPVKGVRLRRD----KI-VVVL---- 116 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~--~~-----~~~~v~~~~~~~~----~~-~~~~---- 116 (424)
.-..+++.|++..+++-- ..+.|++++..+++.... +. .......++++|+ +. ++..
T Consensus 33 ~P~~ia~~pdG~llVter-------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSR-------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp SEEEEEECTTSCEEEEET-------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred CceEEEEcCCCcEEEEEe-------cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 456799999998665543 258999998766654221 11 2456789999985 43 3332
Q ss_pred eccEEEEeecCC----C---ceeEEEeeC--CCCCeeEEEeecCCCCeEEEeec------------cCCeEEEEeCCCCC
Q psy3710 117 EGLIKVYTFIQC----P---QQLHVFETN--PNPKGLCVLCPNSNNSLLAFPGR------------KSGHVHLVDLADPE 175 (424)
Q Consensus 117 ~~~i~v~~~~~~----~---~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~------------~dg~i~i~d~~~~~ 175 (424)
++.|.-|.+... . .....+... ........+.|.|||.+.++.|. ..|.|.-.+....-
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 445655655421 0 111111111 11112345788999987776442 23555555654310
Q ss_pred ---C----CCcccccccCCeEEEEEccCCCEEEEEe-cCCcEEEEEECCCcc------------------eeeEEecc--
Q psy3710 176 ---R----PPLDIAAHEAPLSCIALNQTGTRLATAS-YKGTLIRVFDTGSGQ------------------KLNELRRG-- 227 (424)
Q Consensus 176 ---~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~~i~iwd~~~~~------------------~~~~~~~~-- 227 (424)
. ......+|. ....++|+|+|.+.++-. .++. =.|--+..+. ++..+..+
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~-deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTW-DELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSC-EEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCC-ceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 0 011122443 356899999876655432 2221 2222222221 11122111
Q ss_pred -eeeeeecCCCCeEEEEeecCCeEEEEeCCCCC---CCCeeeccCCCCeEEEEEcCCCCEEEEEe
Q psy3710 228 -LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE---RPPLDIAAHEAPLSCIALNQTGTRLATAS 288 (424)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 288 (424)
...+++. ...++.+.-..+.|....+.... .....+.+....+..++..|||.++++.+
T Consensus 264 ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 264 SPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 1122222 23444444455666666665432 11223334456788899999887655544
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.96 E-value=1.1 Score=35.53 Aligned_cols=105 Identities=9% Similarity=0.057 Sum_probs=65.2
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEECCCcce------eeEEe----cceeeeeecCCCCeEEEEeecCCeEEEEeC
Q psy3710 186 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------LNELR----RGLCVLCPNSNNSLLAFPGRKSGHVHLVDL 255 (424)
Q Consensus 186 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------~~~~~----~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~ 255 (424)
..+..++|+|+|.+.+. .++. ++-.+..+... -..+- .....+.+.+++..+++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~-Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav---~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDK-IYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV---SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTE-EEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE---ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCe-EEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe---CCCEEEEeCC
Confidence 46789999999875555 6777 77777655211 12221 11467788888877765 6699988876
Q ss_pred CCCCCCC-----eee-ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEEC
Q psy3710 256 ADPERPP-----LDI-AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDT 299 (424)
Q Consensus 256 ~~~~~~~-----~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~ 299 (424)
.+..... ..+ ..-=..+..|.|.|+|.+.+.. |+. ++-...
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~-lyr~~~ 161 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ-FYKALP 161 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE-EEEECC
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc-EEecCC
Confidence 4432111 011 0111467999999999877766 776 544433
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.45 E-value=2.9 Score=38.22 Aligned_cols=194 Identities=7% Similarity=-0.008 Sum_probs=109.5
Q ss_pred CCCCeeEeecCCe--EEEEeCCcCcccccccc-cCCCeeeEEEe--ccCceEEEEeCCcCCCcCC------------CeE
Q psy3710 20 QDQGCFACGMEDG--FRIYNCDPLKEKERQDF-TDGGLGHVEML--FRCNYLALVGGGTHPKYPN------------NRV 82 (424)
Q Consensus 20 ~~g~~la~g~~~~--i~iw~~~~~~~~~~~~~-~~~~i~~~~~~--~~~~~l~~~~~~~~~~~~d------------~~i 82 (424)
.||++|..-.... |-..+++..++....+. ....+..+.+. |+..+++..+.-..|.-.| +..
T Consensus 140 yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 140 YDGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEE
Confidence 3678888766444 88888888777444333 24456666665 5777776665332211112 122
Q ss_pred EEEECCCCcEEEEEeecCCeEEEEecCCceEEEe------------------ec-------------------------c
Q psy3710 83 MIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL------------------EG-------------------------L 119 (424)
Q Consensus 83 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------------~~-------------------------~ 119 (424)
...|.++.+...++...+....+...+++.+.++ .. .
T Consensus 220 ~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 220 NAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 2235555565555443333333333444433332 01 2
Q ss_pred EEEEeecC----CCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCC-----CC-------Cccccc
Q psy3710 120 IKVYTFIQ----CPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE-----RP-------PLDIAA 183 (424)
Q Consensus 120 i~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~-----~~-------~~~~~~ 183 (424)
+.|.|.+. .......+.....|. .+..+|||++++++|-.+.++.++|+++.. +. .....
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPH---Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e- 375 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPH---GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE- 375 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCC---CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-
T ss_pred eeEEccccccccCCceEEEEeCCCCCc---ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-
Confidence 34444431 112233333333333 347799999999988889999999988420 11 01111
Q ss_pred ccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCc
Q psy3710 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG 218 (424)
Q Consensus 184 ~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~ 218 (424)
-.-.....+|.++|....+.--|.. |.-|++...
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSq-vvkWni~~a 409 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQ-VVKWNMEEA 409 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTE-EEEEEHHHH
T ss_pred CCCcccEEEECCCCceEeeeeecce-EEEEeccHH
Confidence 1233567899999965566668888 999999753
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.82 E-value=2.7 Score=35.51 Aligned_cols=187 Identities=13% Similarity=0.089 Sum_probs=83.1
Q ss_pred eeEeecCCeEEEEeCCcCcccccccc-cCCCeeeEEEeccCceEEEEeCCcC-C----CcCCCeEEEEECCCCcEEEEEe
Q psy3710 24 CFACGMEDGFRIYNCDPLKEKERQDF-TDGGLGHVEMLFRCNYLALVGGGTH-P----KYPNNRVMIWDDLKKQVVICLE 97 (424)
Q Consensus 24 ~la~g~~~~i~iw~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~~~~-~----~~~d~~i~iwd~~~~~~~~~~~ 97 (424)
+++.|+ ..+..||..+.+-...... +.... ..+....++.+.+.+|... . ......+.++|..+++-...-.
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYLTALAEQIPRN-HSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEEEEECTTSCSS-EEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceecccCCccCCcc-ceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344444 3488999877665321111 11122 2223334555666665210 0 0011237888987776543222
Q ss_pred ecC--CeEEEEecCCceEEEe--e-------ccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeecc----
Q psy3710 98 FNA--PVKGVRLRRDKIVVVL--E-------GLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRK---- 162 (424)
Q Consensus 98 ~~~--~v~~~~~~~~~~~~~~--~-------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 162 (424)
.+. .-.+++...+..+++. + ..+.+||.. +.+ ...+.....+..-.+.+. .+++.+++ |+.
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~-~~~-W~~~~~~p~~r~~~~~~~-~~~~iyv~-GG~~~~~ 171 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV-AAK-WSEVKNLPIKVYGHNVIS-HNGMIYCL-GGKTDDK 171 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT-TTE-EEEECCCSSCEESCEEEE-ETTEEEEE-CCEESSS
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCC-CCC-EeECCCCCCcccccEEEE-ECCEEEEE-cCCCCCC
Confidence 211 1223333344444443 1 347777764 322 222221111111111222 35666666 654
Q ss_pred --CCeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEecC-----CcEEEEEECCCcc
Q psy3710 163 --SGHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYK-----GTLIRVFDTGSGQ 219 (424)
Q Consensus 163 --dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~~i~iwd~~~~~ 219 (424)
...+.+||+.+..- .+..+...... .+++. -+++.++.|+.+ .. +.+||+.+.+
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~-~~~yd~~~~~ 233 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAI-HKGKIVIAGGVTEDGLSAS-VEAFDLKTNK 233 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEEEEEETTEEEEE-EEEEETTTCC
T ss_pred CccceEEEEcCCCCEEEECCCCCCCccc-ceEEE-ECCEEEEEcCcCCCCccce-EEEEECCCCe
Confidence 24588999876410 00001111111 12222 256677777643 24 7789987764
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.73 E-value=3.7 Score=36.85 Aligned_cols=105 Identities=9% Similarity=0.021 Sum_probs=58.9
Q ss_pred cCCeEEEEecCCceEEEe--e-ccEEEEeecCCCceeE--EEeeC----CCCCeeEEEeecCC---CCeEEEeecc----
Q psy3710 99 NAPVKGVRLRRDKIVVVL--E-GLIKVYTFIQCPQQLH--VFETN----PNPKGLCVLCPNSN---NSLLAFPGRK---- 162 (424)
Q Consensus 99 ~~~v~~~~~~~~~~~~~~--~-~~i~v~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~---~~~l~~~~~~---- 162 (424)
-...+.++|.|++.++++ . +.|.+++.. ++.... .+... ....+...++++|+ +..|.++-+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE-SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC-CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 346789999999988877 3 357777643 233221 12110 12345678999996 5556552322
Q ss_pred --------CCeEEEEeCCCCCC------CCc-ccc-cccCCeEEEEEccCCCEEEEEe
Q psy3710 163 --------SGHVHLVDLADPER------PPL-DIA-AHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 163 --------dg~i~i~d~~~~~~------~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
...|.-++...... .+. .+. ........|+|.|||.+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 23565565543211 011 111 1123478999999998777654
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.05 E-value=6.2 Score=37.74 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=55.8
Q ss_pred CCCeEEEeeccC------CeEEEEeCCCCCC-CCcccccccCCeEEEEEccCCCEEEEEecCC--cEEEEEECCCcceee
Q psy3710 152 NNSLLAFPGRKS------GHVHLVDLADPER-PPLDIAAHEAPLSCIALNQTGTRLATASYKG--TLIRVFDTGSGQKLN 222 (424)
Q Consensus 152 ~~~~l~~~~~~d------g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~~i~iwd~~~~~~~~ 222 (424)
+++.+++ |+.+ ..+.+||..+..- .+..+... ..-.+++...+++.++.|+.++ . +.+||..+.+-..
T Consensus 451 ~~~lyv~-GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~-v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLI-GGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPA-MLLYNVTEEIFKD 527 (695)
T ss_dssp TTEEEEE-CCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCS-EEEEETTTTEEEE
T ss_pred CCEEEEE-cCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCC-EEEEECCCCceEE
Confidence 5666666 7643 3578888876310 00011111 1112333334778888887654 6 8999998765322
Q ss_pred EE-----ecc---eeeeeecCCCCeEEEEeec-------CCeEEEEeCCCCC
Q psy3710 223 EL-----RRG---LCVLCPNSNNSLLAFPGRK-------SGHVHLVDLADPE 259 (424)
Q Consensus 223 ~~-----~~~---~~~~~~~~~~~~~~~~~~~-------dg~i~i~d~~~~~ 259 (424)
.- +.+ ...+.+......+++.|+. .+.+.+||+.+..
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 21 111 2223444443445554654 2468889988765
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.72 E-value=6.3 Score=37.68 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=92.6
Q ss_pred CCCCeeEeecCC-----eEEEEeCCcCcccccc-c-----ccCCCeeeEEEecc-CceEEEEeCCcCCCcCCCeEEEEEC
Q psy3710 20 QDQGCFACGMED-----GFRIYNCDPLKEKERQ-D-----FTDGGLGHVEMLFR-CNYLALVGGGTHPKYPNNRVMIWDD 87 (424)
Q Consensus 20 ~~g~~la~g~~~-----~i~iw~~~~~~~~~~~-~-----~~~~~i~~~~~~~~-~~~l~~~~~~~~~~~~d~~i~iwd~ 87 (424)
.++..++.|+.+ .+.+||..+.+-.... . .+............ ++.+.+.||...+...-+.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456666666532 2888887766543222 1 12222222223331 4455566654322111246889998
Q ss_pred CCCcEEEEEe--ecCCeEEEEe-cCCceEEEe----eccEEEEeecCCCceeEEEee----CCCCCeeEEEeecCC-CCe
Q psy3710 88 LKKQVVICLE--FNAPVKGVRL-RRDKIVVVL----EGLIKVYTFIQCPQQLHVFET----NPNPKGLCVLCPNSN-NSL 155 (424)
Q Consensus 88 ~~~~~~~~~~--~~~~v~~~~~-~~~~~~~~~----~~~i~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~ 155 (424)
.+.+-...-. ....-.+++. ..+..+++. .+.+.+||.. +.. ...+.. ........++.+..+ ++.
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~-t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVT-EEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETT-TTE-EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECC-CCc-eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 8765443222 1222223333 333344443 1268888875 332 222221 111122223444444 556
Q ss_pred EEEeecc-------CCeEEEEeCCCCCC--C--Cccccc---ccCCeEEEEEccCCCEEEEEec--------CCcEEEEE
Q psy3710 156 LAFPGRK-------SGHVHLVDLADPER--P--PLDIAA---HEAPLSCIALNQTGTRLATASY--------KGTLIRVF 213 (424)
Q Consensus 156 l~~~~~~-------dg~i~i~d~~~~~~--~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~--------d~~~i~iw 213 (424)
+++ |+. ...+.+||+.+..- . -..+.. ....-.++....+++.++.|+. ... +.+|
T Consensus 554 yv~-GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~y 631 (695)
T 2zwa_A 554 IIL-GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISL 631 (695)
T ss_dssp EEE-CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEE
T ss_pred EEE-CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEE
Confidence 665 765 24688999887531 0 011111 1111112333333667777764 245 7888
Q ss_pred ECCCcce
Q psy3710 214 DTGSGQK 220 (424)
Q Consensus 214 d~~~~~~ 220 (424)
|+.+.+-
T Consensus 632 d~~t~~W 638 (695)
T 2zwa_A 632 DPLSETL 638 (695)
T ss_dssp ETTTTEE
T ss_pred ECCCCeE
Confidence 8876643
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.44 E-value=8.4 Score=35.31 Aligned_cols=91 Identities=8% Similarity=0.047 Sum_probs=63.6
Q ss_pred EEEEECCC----c-ceeeEEe--cceeeeeecCCCCeEEEEeecCCeEEEEeCCCCC-----CC------CeeeccCCCC
Q psy3710 210 IRVFDTGS----G-QKLNELR--RGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE-----RP------PLDIAAHEAP 271 (424)
Q Consensus 210 i~iwd~~~----~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-----~~------~~~~~~~~~~ 271 (424)
+.+.|.+. + ....-++ .....+.++|+|++++++|-.+.++.++|.+... .. +..-..-.-.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 78888876 2 2233333 2356678899999999999999999999998421 00 0111123445
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEECCC
Q psy3710 272 LSCIALNQTGTRLATASYKGTLIRVFDTGS 301 (424)
Q Consensus 272 v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~ 301 (424)
....+|.++|....+.--|.. |.-|++..
T Consensus 380 PlHt~Fd~~G~aYTtlfidSq-vvkWni~~ 408 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQ-VVKWNMEE 408 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTE-EEEEEHHH
T ss_pred ccEEEECCCCceEeeeeecce-EEEEeccH
Confidence 678899999965666668888 99999865
No 349
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=87.67 E-value=20 Score=34.29 Aligned_cols=236 Identities=8% Similarity=-0.008 Sum_probs=120.5
Q ss_pred EEEE-ECCCCCeeEee----cCCe--EEEEeCCcCccccccccc-CC--------CeeeEEEeccCceEEEEeC-Cc---
Q psy3710 14 LYAG-FNQDQGCFACG----MEDG--FRIYNCDPLKEKERQDFT-DG--------GLGHVEMLFRCNYLALVGG-GT--- 73 (424)
Q Consensus 14 ~~~~-~s~~g~~la~g----~~~~--i~iw~~~~~~~~~~~~~~-~~--------~i~~~~~~~~~~~l~~~~~-~~--- 73 (424)
..+. ++|++++++.+ +.+- ++++|+++++.+.. .+. .. ....++|. +.+.+.+... +.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~-~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKN-GFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTT-CSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCC-CcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 3445 89999988853 2222 99999999877532 111 11 12446887 4444444321 10
Q ss_pred CCCcCCCeEEEEECCCCc--EEEEEee-cCCe-EEEEecCCce-----EEEe------eccEEEEeecCCCceeEEEeeC
Q psy3710 74 HPKYPNNRVMIWDDLKKQ--VVICLEF-NAPV-KGVRLRRDKI-----VVVL------EGLIKVYTFIQCPQQLHVFETN 138 (424)
Q Consensus 74 ~~~~~d~~i~iwd~~~~~--~~~~~~~-~~~v-~~~~~~~~~~-----~~~~------~~~i~v~~~~~~~~~~~~~~~~ 138 (424)
.......+|+.|.+-+.. -...+.. ...+ .....++++. .+++ ...+.+.+.......+..+...
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 011124689999876542 2222332 2222 2344445443 2322 2455666653222233333222
Q ss_pred CCCCeeEEEeecCCCCeEEEee---------ccCCeEEEEeCCCCC------CCCcc-c-ccccCCeEEEEEccCCCEEE
Q psy3710 139 PNPKGLCVLCPNSNNSLLAFPG---------RKSGHVHLVDLADPE------RPPLD-I-AAHEAPLSCIALNQTGTRLA 201 (424)
Q Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~---------~~dg~i~i~d~~~~~------~~~~~-~-~~~~~~v~~~~~~~~~~~l~ 201 (424)
.. .. +..+.++.+++.+. ...+.|...++.+.. ..... + ......+..+.+..+ ..++
T Consensus 290 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 290 SD-AT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp TT-CE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred Cc-ce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 21 11 12233555555321 246778899987631 11222 2 122345778888875 5666
Q ss_pred EEecCCc-EEEEEECCCcc-eeeE---Ee--cceeeeeecCCCCeEEEEee---cCCeEEEEeCC
Q psy3710 202 TASYKGT-LIRVFDTGSGQ-KLNE---LR--RGLCVLCPNSNNSLLAFPGR---KSGHVHLVDLA 256 (424)
Q Consensus 202 ~~~~d~~-~i~iwd~~~~~-~~~~---~~--~~~~~~~~~~~~~~~~~~~~---~dg~i~i~d~~ 256 (424)
+...++. .+.++|+.+++ .... ++ +.+......+++..++++.+ .-+.++.+|+.
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6666664 26677766654 2233 22 22444555677777766544 34678888876
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.27 E-value=25 Score=35.01 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=33.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 270 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 270 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
..+.+++..++..++++-+.|++ +|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeee
Confidence 35677888888899999999999 999999999998864
No 351
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.41 E-value=67 Score=32.82 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=29.2
Q ss_pred CceEEEEecCCCeEEEEeccCcEEEEEecCCcceeee
Q psy3710 366 PPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRD 402 (424)
Q Consensus 366 ~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~~ 402 (424)
.+.+++..++..+|++.+.|+++++|++. ++.|+.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~-t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT-TTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC-CCCeEEe
Confidence 34556677888999999999999999997 6666654
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=73.09 E-value=17 Score=36.17 Aligned_cols=38 Identities=16% Similarity=0.199 Sum_probs=33.2
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEe
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~ 225 (424)
.+.+++..++..++++.+.|++ +|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeec
Confidence 4677778888889999999999 9999999999887764
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.26 E-value=14 Score=37.78 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=31.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeee
Q psy3710 271 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308 (424)
Q Consensus 271 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~ 308 (424)
.+.+++..++..++++-+.|++ +|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEee
Confidence 4455667788899999999999 999999999998874
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.70 E-value=64 Score=27.97 Aligned_cols=162 Identities=12% Similarity=0.098 Sum_probs=90.5
Q ss_pred CeeeEEEeccCceEEEEeCCcC-----CC---cCCCeEEEEECCCC--cEEEEEeecC-------CeEEEEec---CC--
Q psy3710 53 GLGHVEMLFRCNYLALVGGGTH-----PK---YPNNRVMIWDDLKK--QVVICLEFNA-------PVKGVRLR---RD-- 110 (424)
Q Consensus 53 ~i~~~~~~~~~~~l~~~~~~~~-----~~---~~d~~i~iwd~~~~--~~~~~~~~~~-------~v~~~~~~---~~-- 110 (424)
.|..+.....+...++=+|... .. .-.-+|.+||+.++ +.++.+..+. .+..+++. ++
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 4555666666665555444211 00 12348999999999 9999987532 36677776 22
Q ss_pred ---ceEEEe---eccEEEEeecCCCceeEEEeeCCC----------------CCeeEEEeecCC----CCeEEEeeccCC
Q psy3710 111 ---KIVVVL---EGLIKVYTFIQCPQQLHVFETNPN----------------PKGLCVLCPNSN----NSLLAFPGRKSG 164 (424)
Q Consensus 111 ---~~~~~~---~~~i~v~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~----~~~l~~~~~~dg 164 (424)
+....+ .+.|.|+|+. +++..+.+..... ..++..++.+|+ ++.|....-...
T Consensus 168 c~~~~aYItD~~~~gLIVydl~-~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHK-KQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETT-TTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCccEEEEEcCCCCcEEEEECC-CCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 232333 4689999996 5544443321110 135677888887 777777333322
Q ss_pred eEEEEe---CCCC--CCCCcccccccC---CeEEEEEc-cCCCEEEEEecCCcEEEEEECCC
Q psy3710 165 HVHLVD---LADP--ERPPLDIAAHEA---PLSCIALN-QTGTRLATASYKGTLIRVFDTGS 217 (424)
Q Consensus 165 ~i~i~d---~~~~--~~~~~~~~~~~~---~v~~~~~~-~~~~~l~~~~~d~~~i~iwd~~~ 217 (424)
.+.--. ++.. ...++. .+..+ .-..+++. .+|..+++--.... |..|+..+
T Consensus 247 ~ly~V~T~~L~~~~~~~~v~~-~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a-I~~w~~~~ 306 (381)
T 3q6k_A 247 KVYSVNTKELKQKGGKLNPEL-LGNRGKYNDAIALAYDPKTKVIFFAEANTKQ-VSCWNTQK 306 (381)
T ss_dssp EEEEEEHHHHSSTTCCCCCEE-EEECCTTCCEEEEEECTTTCEEEEEESSSSE-EEEEETTS
T ss_pred cEEEEEHHHhhCcchhhceEE-eeecCCCCCcceEEEeCCCCeEEEEeccCCe-EEEEeCCC
Confidence 333222 1111 111221 22222 33456675 56776777777777 99999875
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=61.66 E-value=80 Score=27.35 Aligned_cols=198 Identities=16% Similarity=0.164 Sum_probs=98.2
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCCcce------e-eEEec------ceeeeeecCCCCeEEEEeecCCeEEEE
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------L-NELRR------GLCVLCPNSNNSLLAFPGRKSGHVHLV 253 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------~-~~~~~------~~~~~~~~~~~~~~~~~~~~dg~i~i~ 253 (424)
.+..++.+......+....||. |+.|-....-. . ...+. ......+.......+ +-..+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~-v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~-alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGE-VYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSA-CVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSC-EEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEE-EEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCC-EEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEE-EEeCCCeEEEe
Confidence 3455666666667777788999 99996532110 0 00110 112222222222222 35678999999
Q ss_pred eCCCCCCC----------Ceee-ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce------------------
Q psy3710 254 DLADPERP----------PLDI-AAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------------------ 304 (424)
Q Consensus 254 d~~~~~~~----------~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------------------ 304 (424)
-.....+. ...+ ......|..++......+.+....|+. |..|-....-.
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~-v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT-VWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTE-EEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCE-EEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 76432110 0111 112345666766543356666778888 99996542111
Q ss_pred ----eeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEE
Q psy3710 305 ----LNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSII 380 (424)
Q Consensus 305 ----~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 380 (424)
+..+.......++-..||.|+.|=.....++..-.... ...|.... ......+. .++.-....+
T Consensus 263 ~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~--~~~P~~v~--------~l~~~~v~--~ia~G~~h~~ 330 (389)
T 3kci_A 263 TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQ--------GLQGKKVI--AIATGSLHCV 330 (389)
T ss_dssp TTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCC--EEEEEECG--------GGTTCCEE--EEEECSSEEE
T ss_pred CCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCcc--ccCCeEec--------cCCCCCEE--EEEeccCeEE
Confidence 11111223334445678999999876543332211100 00111000 00111233 3333344555
Q ss_pred EEeccCcEEEEEecCCcce
Q psy3710 381 VICADGSYYKFMFNSKGEC 399 (424)
Q Consensus 381 ~~~~dg~v~~~~~~~~~~~ 399 (424)
....||.|+.|-.+..+++
T Consensus 331 al~~~G~v~~wG~n~~GqL 349 (389)
T 3kci_A 331 CCTEDGEVYTWGDNDEGQL 349 (389)
T ss_dssp EEETTCCEEEEECCTTSTT
T ss_pred EECCCCCEEEeeCCCCCcC
Confidence 5678999999988765443
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=59.89 E-value=97 Score=27.74 Aligned_cols=101 Identities=11% Similarity=-0.026 Sum_probs=56.9
Q ss_pred eeeEEEeccCc-eEEEEeCCcCCCcCCCeEEEEECCCC---cEEEEEe--e--------cCCeEEEEecCC-----ceEE
Q psy3710 54 LGHVEMLFRCN-YLALVGGGTHPKYPNNRVMIWDDLKK---QVVICLE--F--------NAPVKGVRLRRD-----KIVV 114 (424)
Q Consensus 54 i~~~~~~~~~~-~l~~~~~~~~~~~~d~~i~iwd~~~~---~~~~~~~--~--------~~~v~~~~~~~~-----~~~~ 114 (424)
-..+++.|+++ .++++. ..+.|++++.... ..+..+. . ......|+++|+ ..++
T Consensus 16 P~~~a~~pdG~~rl~V~e-------r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE-------KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEEEECCSSSSCCEEEEE-------TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred ceEEEECCCCCeEEEEEe-------CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 35688999986 455555 3689999975322 1222221 1 356789999997 3444
Q ss_pred Ee----e----------ccEEEEeecCC---------CceeEEEeeCCCCCeeEEEeecCCCCeEEEeec
Q psy3710 115 VL----E----------GLIKVYTFIQC---------PQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGR 161 (424)
Q Consensus 115 ~~----~----------~~i~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (424)
+. + ..|.-|.+... .+.+..+...........+.|.|||.+.+++|.
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 43 1 13444555321 122223322222233567899999988877554
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=58.70 E-value=1e+02 Score=27.60 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=56.5
Q ss_pred eEEEeecCCCC-eEEEeeccCCeEEEEeCCCCC--CCCcccc---------cccCCeEEEEEccC----CCEEEEEecC-
Q psy3710 144 LCVLCPNSNNS-LLAFPGRKSGHVHLVDLADPE--RPPLDIA---------AHEAPLSCIALNQT----GTRLATASYK- 206 (424)
Q Consensus 144 ~~~~~~~~~~~-~l~~~~~~dg~i~i~d~~~~~--~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~d- 206 (424)
-..+++.|++. .|++ +...|.|++++..... ..+..+. ........|+|+|+ +.+.++-+.+
T Consensus 16 P~~~a~~pdG~~rl~V-~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFI-LEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp EEEEECCSSSSCCEEE-EETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred ceEEEECCCCCeEEEE-EeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 46788999986 3444 5788999999754321 1111111 11356789999996 4333332221
Q ss_pred -----------CcEEEEEECCC----------cceeeEEec----c-eeeeeecCCCCeEEEEee
Q psy3710 207 -----------GTLIRVFDTGS----------GQKLNELRR----G-LCVLCPNSNNSLLAFPGR 245 (424)
Q Consensus 207 -----------~~~i~iwd~~~----------~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 245 (424)
.. |.-|.+.. .+.+..+.. | ...+.|.|++..++.+|.
T Consensus 95 ~~~~~~~~~~~~~-v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILR-VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEE-EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceE-EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13 44455532 123333331 1 456899999977776664
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=58.43 E-value=92 Score=27.00 Aligned_cols=157 Identities=12% Similarity=0.118 Sum_probs=89.9
Q ss_pred CceEEEEECCCCCeeE--eec------------CCe--EEEEeCCcC--ccccccccc------CCCeeeEEEe---cc-
Q psy3710 11 NGLLYAGFNQDQGCFA--CGM------------EDG--FRIYNCDPL--KEKERQDFT------DGGLGHVEML---FR- 62 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la--~g~------------~~~--i~iw~~~~~--~~~~~~~~~------~~~i~~~~~~---~~- 62 (424)
-.|..+...+.+++-+ +|. ... |.+||+.+. +.+.+..++ ...+..+.+. +.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3677888888776544 442 122 899999998 776555442 2345566666 21
Q ss_pred --CceEEEEeCCcCCCcCCCeEEEEECCCCcEEEEEe-------------------ecCCeEEEEecCC----ceEEEe-
Q psy3710 63 --CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-------------------FNAPVKGVRLRRD----KIVVVL- 116 (424)
Q Consensus 63 --~~~l~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-------------------~~~~v~~~~~~~~----~~~~~~- 116 (424)
++..+.++.. ....|.|+|+.+++..+... ....+..++++|+ +..+..
T Consensus 167 ~c~~~~aYItD~-----~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~ 241 (381)
T 3q6k_A 167 DCSETFVYITNF-----LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYL 241 (381)
T ss_dssp TSCSEEEEEEET-----TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEE
T ss_pred CCCccEEEEEcC-----CCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEE
Confidence 2455555543 26899999999887765442 1236778888887 544443
Q ss_pred -eccEEEEeecC----C---CceeEEEeeCCCCCeeEEEeec-CCCCeEEEeeccCCeEEEEeCCC
Q psy3710 117 -EGLIKVYTFIQ----C---PQQLHVFETNPNPKGLCVLCPN-SNNSLLAFPGRKSGHVHLVDLAD 173 (424)
Q Consensus 117 -~~~i~v~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~dg~i~i~d~~~ 173 (424)
-..-++|.+.. + ...++.+............+.. .+|.+++. --....|..|+..+
T Consensus 242 plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~-~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 242 AGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFA-EANTKQVSCWNTQK 306 (381)
T ss_dssp ESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEE-ESSSSEEEEEETTS
T ss_pred ECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEE-eccCCeEEEEeCCC
Confidence 22334444420 1 1222222222111234455665 45554444 67788999999875
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.96 E-value=21 Score=33.84 Aligned_cols=60 Identities=12% Similarity=0.169 Sum_probs=41.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCceeeeec-------------c---CC-------cEEEEEe--CCCcE
Q psy3710 270 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-------------R---DS-------SYLCVSS--DHGTV 324 (424)
Q Consensus 270 ~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~-------------~---~~-------~~l~~~~--~d~~i 324 (424)
..|.++.+ +..++++-+.|.+ +|+|++++++++.+.. | .+ .++++=. .+|..
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~F 298 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLF 298 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEE
T ss_pred ceEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeE
Confidence 34555555 4679999999999 9999999999877532 1 11 3444332 46789
Q ss_pred EEEEcccc
Q psy3710 325 HVFSVDEA 332 (424)
Q Consensus 325 ~iw~~~~~ 332 (424)
++|++...
T Consensus 299 k~~~l~~~ 306 (729)
T 3f7f_A 299 QMGTLLVD 306 (729)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEEc
Confidence 99988653
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.79 E-value=49 Score=30.51 Aligned_cols=59 Identities=12% Similarity=0.035 Sum_probs=31.7
Q ss_pred eeeecCCCCeEEEEeec-----------CCeEEEEeCCCCCCCCeeecc-CCCCeEEEEEcCCCCEEEEEeC
Q psy3710 230 VLCPNSNNSLLAFPGRK-----------SGHVHLVDLADPERPPLDIAA-HEAPLSCIALNQTGTRLATASY 289 (424)
Q Consensus 230 ~~~~~~~~~~~~~~~~~-----------dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 289 (424)
-+++.++|...+.+-.. .+.++.++..+++. ...+.. ....++.++|+||++.|+.+-.
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 35666666555533211 12556666555442 222222 2356788888888887776543
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.25 E-value=37 Score=32.26 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=29.4
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEec
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR 226 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~ 226 (424)
.|.++.+ +..++++-+.|++ +|+|++++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeecc
Confidence 3554444 4679999999999 99999999998877654
No 362
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=44.22 E-value=1.6e+02 Score=25.45 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=71.7
Q ss_pred EccCCCEEEEEecCCcEEEEEECCCc---------ceeeEEecc--eeeeeecCCCCeEEEEeecCCeEEEEeC---CCC
Q psy3710 193 LNQTGTRLATASYKGTLIRVFDTGSG---------QKLNELRRG--LCVLCPNSNNSLLAFPGRKSGHVHLVDL---ADP 258 (424)
Q Consensus 193 ~~~~~~~l~~~~~d~~~i~iwd~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dg~i~i~d~---~~~ 258 (424)
+-|+..++++.+.+|. |+--.+... .....++.+ +..+........+++ -+..|.++-+.. +..
T Consensus 3 lI~~e~~~v~lT~~Gy-IKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~-fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGY-AKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLT-FTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCEEEEEESSCE-EEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEE-EETTSEEEEEEGGGSCBC
T ss_pred cccCCCEEEEEeCCCE-EEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEE-EeCCCeEEEEEHHHCcCC
Confidence 3467788899999998 887654321 112222222 222222233344444 567777665543 322
Q ss_pred CC-----C-Ceeec-cCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEEECCCCc-------eeeeec-----------c
Q psy3710 259 ER-----P-PLDIA-AHEAPLSCIALNQ---TGTRLATASYKGTLIRVFDTGSGQ-------KLNELR-----------R 310 (424)
Q Consensus 259 ~~-----~-~~~~~-~~~~~v~~~~~~~---~~~~l~~~~~d~~~i~iwd~~~~~-------~~~~~~-----------~ 310 (424)
.. + ...+. .....|.++..-+ ++.+|+.++..|. ++...+.... ....+. .
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~-vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGT-VKKTPLSEFAFRLARGKIAINLDEGDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSE-EEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCe-EEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeC
Confidence 11 0 11111 2334555554332 4568999999999 8888764321 111222 2
Q ss_pred CCcEEEEEeCCCcEEEEEccc
Q psy3710 311 DSSYLCVSSDHGTVHVFSVDE 331 (424)
Q Consensus 311 ~~~~l~~~~~d~~i~iw~~~~ 331 (424)
....++..+.+|.+..++...
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGG
T ss_pred CCceEEEEeCCCeEEEEEccc
Confidence 334566667777777777655
No 363
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=42.78 E-value=1.5e+02 Score=24.78 Aligned_cols=182 Identities=12% Similarity=0.203 Sum_probs=94.8
Q ss_pred cCCCEEEEEecCCcEEEEEECCCcceee---------EEecc--eeeeeecCCCCeEEEEeecCCeEEEEeCCCCC----
Q psy3710 195 QTGTRLATASYKGTLIRVFDTGSGQKLN---------ELRRG--LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPE---- 259 (424)
Q Consensus 195 ~~~~~l~~~~~d~~~i~iwd~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---- 259 (424)
++..++++.+.+|. |+--.+..-+... .++.+ +..+........+++ .+..|.++-+....-.
T Consensus 6 ~~e~~~v~~T~~G~-iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~-~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLTKKGF-LKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFM-ISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEETTCB-EEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEE-EETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEeCCCE-EEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEE-EECCCeEEEEEHHHCCCCCc
Confidence 45667888899998 8877664332211 11211 112222222333443 6778887766653211
Q ss_pred ----CC---CeeeccCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEEECCC-------Cceeeeec-----------cC
Q psy3710 260 ----RP---PLDIAAHEAPLSCIALNQ---TGTRLATASYKGTLIRVFDTGS-------GQKLNELR-----------RD 311 (424)
Q Consensus 260 ----~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~~i~iwd~~~-------~~~~~~~~-----------~~ 311 (424)
.+ ...+. ....|.++...+ +..+|+..+..|. ++...+.. |.....+. .+
T Consensus 84 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~-~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~ 161 (312)
T 1suu_A 84 ASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGK-IARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFK 161 (312)
T ss_dssp ----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE-EEEEEGGGGCC----CEECBCCCTTCCEEEEEEECT
T ss_pred cCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCe-EEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCC
Confidence 00 11122 233455553332 4567888899998 77776632 21111122 23
Q ss_pred CcEEEEEeCCCcEEEEEcccccccccc-ccceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEE
Q psy3710 312 SSYLCVSSDHGTVHVFSVDEAQKINKQ-SSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYK 390 (424)
Q Consensus 312 ~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~ 390 (424)
+..++..+.+|.+..+....-....+. ........ . .+..+..+..-.++..|++.+..|..+.
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L--------------~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr 226 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL--------------K-EGDLFVKVLSVKENPYLLIVSENGYGKR 226 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC--------------C-TTCCEEEEEECTTCSEEEEEETTSEEEE
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe--------------C-CCCEEEEEEEECCCCeEEEEECCCceEE
Confidence 456777788888888887653222221 11111110 0 1233444444445667889999999999
Q ss_pred EEecC
Q psy3710 391 FMFNS 395 (424)
Q Consensus 391 ~~~~~ 395 (424)
..+..
T Consensus 227 ~~~~e 231 (312)
T 1suu_A 227 LNMSK 231 (312)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 88863
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.29 E-value=66 Score=29.91 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=34.4
Q ss_pred eeeeecCCCCeEEEEeec-----------CCeEEEEeCCCCCCCCeeec-cCCCCeEEEEEcCCCCEEEEE
Q psy3710 229 CVLCPNSNNSLLAFPGRK-----------SGHVHLVDLADPERPPLDIA-AHEAPLSCIALNQTGTRLATA 287 (424)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~-----------dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 287 (424)
--+++++.+..++..-+. ++.+.+.+..+++. .+.+. .....++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 346788888755543111 13455556555442 22222 345789999999999887754
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=38.98 E-value=2.7e+02 Score=26.66 Aligned_cols=235 Identities=11% Similarity=0.042 Sum_probs=114.7
Q ss_pred eeEE-EeccCceEEEEe--CCcCCCcCCCeEEEEECCCCcEEEE-Ee-e-cC------CeEEEEecC-CceEEEe-----
Q psy3710 55 GHVE-MLFRCNYLALVG--GGTHPKYPNNRVMIWDDLKKQVVIC-LE-F-NA------PVKGVRLRR-DKIVVVL----- 116 (424)
Q Consensus 55 ~~~~-~~~~~~~l~~~~--~~~~~~~~d~~i~iwd~~~~~~~~~-~~-~-~~------~v~~~~~~~-~~~~~~~----- 116 (424)
..+. ++|+++++++.- ++. .-..++++|+.+++.+.. +. . +. ....++|.. ++.++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~----d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGK----DEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKN 207 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTC----SEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTT
T ss_pred eceeecCCCCCEEEEEeCCCCC----ceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCC
Confidence 3444 778887765432 221 246899999999987641 11 0 00 002335543 4444432
Q ss_pred -------eccEEEEeecCCC-ceeEEEeeCCCCCeeEEEeecCCCCe----EEEeec---cCCeEEEEeCCCCCCCCccc
Q psy3710 117 -------EGLIKVYTFIQCP-QQLHVFETNPNPKGLCVLCPNSNNSL----LAFPGR---KSGHVHLVDLADPERPPLDI 181 (424)
Q Consensus 117 -------~~~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~---~dg~i~i~d~~~~~~~~~~~ 181 (424)
...|+.|.+.+.. +....+....... ......++++++ ++++.+ ....+.+.+..........+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYI-YVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSC-EEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccCCCce-EEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 2468888875322 2333455544433 233445666663 333222 22456666765321221222
Q ss_pred ccccCCeEEEEEccCCCEEEEE----------ecCCcEEEEEECCCcc-------eeeE-Eec--c--eeeeeecCCCCe
Q psy3710 182 AAHEAPLSCIALNQTGTRLATA----------SYKGTLIRVFDTGSGQ-------KLNE-LRR--G--LCVLCPNSNNSL 239 (424)
Q Consensus 182 ~~~~~~v~~~~~~~~~~~l~~~----------~~d~~~i~iwd~~~~~-------~~~~-~~~--~--~~~~~~~~~~~~ 239 (424)
..... ..+..+.++..++.. ...+. |...|+.++. .... +.. . +..+.+. +..
T Consensus 287 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~ 361 (711)
T 4hvt_A 287 NMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGS-LVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT--KDR 361 (711)
T ss_dssp CSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTC-EEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC--SSC
T ss_pred ecCCc--ceEeeeECCEEEEEECcccccccccCCCCe-EEEEECCcccccccccccceEEECCCCCCeEEEEEEE--CCE
Confidence 21111 122334455544422 13566 8888887642 1222 222 1 3334444 346
Q ss_pred EEEEeecCCe--EEEEeCCCCCCCCee-ec-cCCCCeEEEEEcCCCCE-EEEEeC---CCcEEEEEECC
Q psy3710 240 LAFPGRKSGH--VHLVDLADPERPPLD-IA-AHEAPLSCIALNQTGTR-LATASY---KGTLIRVFDTG 300 (424)
Q Consensus 240 ~~~~~~~dg~--i~i~d~~~~~~~~~~-~~-~~~~~v~~~~~~~~~~~-l~~~~~---d~~~i~iwd~~ 300 (424)
++++...++. ++++|+.++...... +. ...+.+.....++++.. +++.+. -+. +..+|+.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~-~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPT-IYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCE-EEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCE-EEEEeCC
Confidence 7776777764 677776654311111 21 11345666667776654 444333 244 7777776
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=36.60 E-value=1.9e+02 Score=24.32 Aligned_cols=198 Identities=10% Similarity=0.039 Sum_probs=0.0
Q ss_pred ccccccccCCceEEEEECC--CCCeeEeecCCe-EEEEeCCcCcccccccc------cCCCeeeEEEeccCceEEEEeCC
Q psy3710 2 NLGTSSTYKNGLLYAGFNQ--DQGCFACGMEDG-FRIYNCDPLKEKERQDF------TDGGLGHVEMLFRCNYLALVGGG 72 (424)
Q Consensus 2 ~~~~l~~h~~~V~~~~~s~--~g~~la~g~~~~-i~iw~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~~ 72 (424)
++..+..-+.-+..+...+ +..+++..+.+| ++--.+........... ....+..+......+.+++++
T Consensus 87 ~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T-- 164 (327)
T 3uc1_A 87 NLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVS-- 164 (327)
T ss_dssp HHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEE--
T ss_pred HccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEE--
Q ss_pred cCCCcCCCeEEEEECC-----------CCcEEEEEeecCCeEEEEecCCceEEEe---eccEEEEeecC------CCcee
Q psy3710 73 THPKYPNNRVMIWDDL-----------KKQVVICLEFNAPVKGVRLRRDKIVVVL---EGLIKVYTFIQ------CPQQL 132 (424)
Q Consensus 73 ~~~~~~d~~i~iwd~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~i~v~~~~~------~~~~~ 132 (424)
..|.+..+... .|.....+.....|.++...++...+.. .|.++.-.+.. .++-+
T Consensus 165 -----~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~ 239 (327)
T 3uc1_A 165 -----ANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGV 239 (327)
T ss_dssp -----TTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred -----CCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcE
Q ss_pred EEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCC--------CCCCCCcccccccCCeEEEEEccCCCEEEEEe
Q psy3710 133 HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLA--------DPERPPLDIAAHEAPLSCIALNQTGTRLATAS 204 (424)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 204 (424)
..++.......+..+....+...++. .+.+|.+.-++.. +.......+.....-+......++...+.+.+
T Consensus 240 ~~~~l~~~~d~lv~~~~~~~~~~i~l-~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~~~ 318 (327)
T 3uc1_A 240 LTVMYDRRRGRLVGALIVDDDSELYA-VTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVD 318 (327)
T ss_dssp ESSCCCTTTCSEEEEEEECTTCEEEE-EEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC----------
T ss_pred EEEEecCCCCeEEEEEEeCCCccEEE-EcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEEEe
Q ss_pred cCC
Q psy3710 205 YKG 207 (424)
Q Consensus 205 ~d~ 207 (424)
.+|
T Consensus 319 ~~g 321 (327)
T 3uc1_A 319 ANG 321 (327)
T ss_dssp ---
T ss_pred cCC
No 367
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=35.82 E-value=2.1e+02 Score=24.61 Aligned_cols=141 Identities=11% Similarity=0.169 Sum_probs=73.2
Q ss_pred eecCCeEEEEeCCCCCCC----------Ceeec-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCc---------
Q psy3710 244 GRKSGHVHLVDLADPERP----------PLDIA-AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ--------- 303 (424)
Q Consensus 244 ~~~dg~i~i~d~~~~~~~----------~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~--------- 303 (424)
-..+|.|+.|-.....+. ...+. .....+..++++....+.+....||. |..|-....-
T Consensus 68 l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~-v~~wG~n~~GqLG~g~~~~ 146 (389)
T 3kci_A 68 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE-VYSWGEAEDGKLGHGNRSP 146 (389)
T ss_dssp EETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSC-EEEEECCGGGTTCSSSCCC
T ss_pred EcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCC-EEEEeCCCCCcCCCCCCcc
Confidence 567889999865432110 01111 12234555677666677777788998 9999653211
Q ss_pred -------------eeeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeecCCCceEE
Q psy3710 304 -------------KLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCIC 370 (424)
Q Consensus 304 -------------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (424)
.+..+.......++-..||.|+.|-.....++....... ...|.... ......+..+
T Consensus 147 ~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~--~~~p~~v~--------~~~~~~v~~i 216 (389)
T 3kci_A 147 CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSED--QLKPKLVE--------ALQGHRVVDI 216 (389)
T ss_dssp EEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCC--EEEEEECG--------GGTTSCEEEE
T ss_pred CcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcc--cccceEec--------ccCCCeEEEE
Confidence 111222234445556679999999876533332211100 01111000 0012234444
Q ss_pred EEecCCCeEEEEeccCcEEEEEecC
Q psy3710 371 AFGADSNSIIVICADGSYYKFMFNS 395 (424)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~~~~~~~ 395 (424)
+........+....||.|+.|-.+.
T Consensus 217 a~G~g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 217 ACGSGDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp EECCSSCEEEEEETTTEEEEEECCG
T ss_pred EEcCCCcEEEEEccCCEEEEEeCCC
Confidence 4443334566677889999997654
No 368
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=35.46 E-value=1.3e+02 Score=27.16 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=36.7
Q ss_pred eEEEEeecCCeEEEEeCCCCC-------CCCeeec--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy3710 239 LLAFPGRKSGHVHLVDLADPE-------RPPLDIA--AHEAPLSCIALNQTGTRLATASYKGTLIRV 296 (424)
Q Consensus 239 ~~~~~~~~dg~i~i~d~~~~~-------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~~i~i 296 (424)
.+++.|+.+|.|+-.-+.... ..+..+. ....+|..|.++++..+|+.++.++. ++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V-~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV-AQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE-EEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE-EEE
Confidence 456678999987655443211 1222222 24578899999999999999998885 443
No 369
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=30.73 E-value=2.2e+02 Score=23.21 Aligned_cols=208 Identities=10% Similarity=0.014 Sum_probs=0.0
Q ss_pred CeEEEEecCCceEEEeeccEEEEeecCCCceeEEEeeCCCCCeeEEEeecCCCCeEEEeeccCCeEEEEeCCCCCCCCcc
Q psy3710 101 PVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLD 180 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dg~i~i~d~~~~~~~~~~ 180 (424)
.|..++......++..+|.+..|-....+++-...........+.+ +..-.. +-.||.|..|-.... ..+-.
T Consensus 25 ~i~~ia~G~~h~~~l~~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~------G~~hs~-~l~~G~v~~wG~n~~-Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALKGGKVLGWGANLNGQLTMPAATQSGVDAIAA------GNYHSL-ALKDGEVIAWGGNED-GQTTV 96 (282)
T ss_dssp SCCEEEECSSEEEEEETTEEEEEECCSSSTTSCCGGGGSCCCEEEE------CSSEEE-EEETTEEEEEECCTT-STTCC
T ss_pred CCcEEEeCCCeEEEEECCEEEEEeCCCCCCCCCCccCCCCEEEEEe------CCCEEE-EEECCEEEEeeCCCC-CCCCC
Q ss_pred cccccCCeEEEEEccCCCEEEEEecCCcEEEEEECCCcceeeEEecceeeeeecCCCCeEEEEeecCCeEEEEeCCCCCC
Q psy3710 181 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER 260 (424)
Q Consensus 181 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 260 (424)
...-...|..++-..+...+++ ++. |+.|-....-.+.........+.--..+....+.-. +|.++.|-.....+
T Consensus 97 P~~~~~~v~~ia~G~~hs~al~---~G~-v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYALK---DGK-VIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEEE---TTE-EEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTST
T ss_pred CcccCCCeEEEECcCCEEEEEe---CCe-EEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCC
Q ss_pred CCeeeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCC----------ceeeeeccCCcEEEEEeCCCcEEEE
Q psy3710 261 PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG----------QKLNELRRDSSYLCVSSDHGTVHVF 327 (424)
Q Consensus 261 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~----------~~~~~~~~~~~~l~~~~~d~~i~iw 327 (424)
.-..... ...|..++...+...++ .||. |..|-.... ..+..+.......++-. ||.++.|
T Consensus 172 lg~p~~~-~~~v~~i~~G~~hs~al---~~G~-v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~w 242 (282)
T 3qhy_B 172 TTVPAEA-QSGVDDVAGGIFHSLAL---KDGK-VIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAW 242 (282)
T ss_dssp TSCCGGG-GSSEEEEEECSSEEEEE---ETTE-EEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEE
T ss_pred CCCceec-CCCeEEEEecCCEEEEE---ECCe-EEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEe
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=30.14 E-value=2.2e+02 Score=23.15 Aligned_cols=193 Identities=9% Similarity=-0.029 Sum_probs=90.7
Q ss_pred CceEEEEECCCCCeeE-eecCCe---EEEEeCCcCcccccccccCCCeeeEEEec--cCceEEEEeCCcCCCcCCCeEEE
Q psy3710 11 NGLLYAGFNQDQGCFA-CGMEDG---FRIYNCDPLKEKERQDFTDGGLGHVEMLF--RCNYLALVGGGTHPKYPNNRVMI 84 (424)
Q Consensus 11 ~~V~~~~~s~~g~~la-~g~~~~---i~iw~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~~~~~~~~d~~i~i 84 (424)
+.+..+.-......|. ..+.+. +.+|++.......... ....|..+-. . +...+++++ .+|.++-
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T-------~~G~iKr 94 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLAT-------KKGYVKK 94 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEE-------TTSEEEE
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEe-------CCCEEEE
Confidence 4455554444444444 444443 4445543222111111 2445544433 3 356788888 5788988
Q ss_pred EECCCC------cEEEEEeecCCeEEEEecCC--ceEEEe-eccEEEEeecCC---Cc---eeEEEeeCCCCCeeEEEee
Q psy3710 85 WDDLKK------QVVICLEFNAPVKGVRLRRD--KIVVVL-EGLIKVYTFIQC---PQ---QLHVFETNPNPKGLCVLCP 149 (424)
Q Consensus 85 wd~~~~------~~~~~~~~~~~v~~~~~~~~--~~~~~~-~~~i~v~~~~~~---~~---~~~~~~~~~~~~~~~~~~~ 149 (424)
..+..- .....+...+.+..+....+ ..++++ .|.+..+...+- ++ -...+....+ ..+..+..
T Consensus 95 ~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~~~~ 173 (276)
T 3no0_A 95 IPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSGLRI 173 (276)
T ss_dssp EEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEEEEE
T ss_pred EEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEEEEE
Confidence 876432 11112223345555544333 244444 677777765311 11 1111222222 23444444
Q ss_pred cCCCCeEEEeeccCCeEEEEeCCCCCC------CCcccccccCCeEEEEEccCCCEEEEEecCCcEEEE--EECC
Q psy3710 150 NSNNSLLAFPGRKSGHVHLVDLADPER------PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRV--FDTG 216 (424)
Q Consensus 150 ~~~~~~l~~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~i--wd~~ 216 (424)
.+++..+++ .+..|.++...+..-.. -...+ ...+.+..+....+...++..+.+|. +.. ++..
T Consensus 174 ~~~~~~ll~-~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~-~ir~~~~~~ 245 (276)
T 3no0_A 174 WNGEPYLLV-ITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGK-AFYDKINQK 245 (276)
T ss_dssp ESSCSEEEE-EETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSC-EEEEEEEGG
T ss_pred eCCCCEEEE-EeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCe-EEEeeeCHH
Confidence 445556666 78889988887653211 11112 22344444433333345555666666 555 5543
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.88 E-value=2.8e+02 Score=25.72 Aligned_cols=57 Identities=7% Similarity=0.041 Sum_probs=35.2
Q ss_pred CeEEEEecCCceEEE-eecc------------EEEEeecC-CCceeEEEeeCCCCCeeEEEeecCCCCeEEE
Q psy3710 101 PVKGVRLRRDKIVVV-LEGL------------IKVYTFIQ-CPQQLHVFETNPNPKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 101 ~v~~~~~~~~~~~~~-~~~~------------i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (424)
....+.|.++|.+.+ +|+. =.+|-+.. .++....+ ........+.++|+||++.|++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eCCCCccccCCEECCCCCEEEE
Confidence 356788999886555 5541 13444433 34443333 3222356789999999999988
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=28.33 E-value=2.8e+02 Score=25.76 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=35.4
Q ss_pred eEEEEecCCceEEEe-ecc------------EEEEeecC-CCceeEEEeeCCCCCeeEEEeecCCCCeEEE
Q psy3710 102 VKGVRLRRDKIVVVL-EGL------------IKVYTFIQ-CPQQLHVFETNPNPKGLCVLCPNSNNSLLAF 158 (424)
Q Consensus 102 v~~~~~~~~~~~~~~-~~~------------i~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (424)
.-.|+|+|.+.+++. |+. -.+|-... .++..+.+.. .....++.++|+||++.|++
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEE
Confidence 466899999865554 532 23333322 3444444443 44567899999999999887
No 373
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=25.81 E-value=2.9e+02 Score=22.94 Aligned_cols=250 Identities=14% Similarity=0.152 Sum_probs=116.5
Q ss_pred CCCeEEEeeccCCeEEEEeCCCCCCCC--------cccccccCCeEEEEEccCCCEEEEEecCCcEEEEEEC---CC---
Q psy3710 152 NNSLLAFPGRKSGHVHLVDLADPERPP--------LDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDT---GS--- 217 (424)
Q Consensus 152 ~~~~l~~~~~~dg~i~i~d~~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~---~~--- 217 (424)
+...+++ .+.+|.|+--.+..-.... ..+. ..+.+..+........++..+..|. ++-+.. +.
T Consensus 2 ~e~~~v~-~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~-~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 2 QEDVVVT-LSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGR-VYSMKVYQLPEATR 78 (307)
T ss_dssp CCEEEEE-EETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSE-EEEEEGGGSCCCCS
T ss_pred CCcEEEE-EeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCE-EEEEEhhHCcCCCC
Confidence 3445555 7889999877665421110 0122 2344545555555667777777887 555543 22
Q ss_pred ---cceee---EEecc--ee-eeeec--CCCCeEEEEeecCCeEEEEeCCCCCCC------CeeeccCCCCeEEEEEcCC
Q psy3710 218 ---GQKLN---ELRRG--LC-VLCPN--SNNSLLAFPGRKSGHVHLVDLADPERP------PLDIAAHEAPLSCIALNQT 280 (424)
Q Consensus 218 ---~~~~~---~~~~~--~~-~~~~~--~~~~~~~~~~~~dg~i~i~d~~~~~~~------~~~~~~~~~~v~~~~~~~~ 280 (424)
|.++. .+..+ +. .+... .++..++ ..+.+|.++-..+...... ...+..+ +.+..+....+
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll-~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~ 156 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVF-MATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSG 156 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEE-EEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEE-EEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCC
Confidence 22111 12222 21 22221 2334444 4899999999877532211 1122233 55555555555
Q ss_pred CCEEEEEeCCCcEEEEEECCC---------Cceeeeec-----------cCCcEEEEEeCCCcEEEEEcccccccccccc
Q psy3710 281 GTRLATASYKGTLIRVFDTGS---------GQKLNELR-----------RDSSYLCVSSDHGTVHVFSVDEAQKINKQSS 340 (424)
Q Consensus 281 ~~~l~~~~~d~~~i~iwd~~~---------~~~~~~~~-----------~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 340 (424)
...++..+.+|. +..++... |...-.+. .++..+++.+..|.++-.++.......+-
T Consensus 157 ~~~i~l~T~~G~-~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg-- 233 (307)
T 1zi0_A 157 EDEVMLFSAEGK-VVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRA-- 233 (307)
T ss_dssp TCEEEEEETTSE-EEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTT--
T ss_pred CCEEEEECCCCc-EEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCC--
Confidence 567777888887 66665532 11111122 22345666666666666665442211110
Q ss_pred ceeeeccCccccCCceeeEEeecCCCceEEEEecCCCeEEEEeccCcEEEEEecCCcceee-eeehhhheecCCCceeeE
Q psy3710 341 LASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWR-DVYIQFLEMTNDSNLLSC 419 (424)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~dg~v~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~~ 419 (424)
-.+.. ...+....+.+..+....+...|+..+.+|.+..+....-...-+ ..-...+...+++.....
T Consensus 234 ~kG~~-----------~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~i~~~~R~~~Gv~~i~l~~~~~v~~~ 302 (307)
T 1zi0_A 234 TKGVI-----------SIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGL 302 (307)
T ss_dssp SCCEE-----------SSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGGSCBCCSSCCCEECSCCCTTCCEEEE
T ss_pred CCCEE-----------eeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecccccccCcCCCCeEeEEcCCCCEEEEE
Confidence 00000 000111123333333333445677888899888887763222112 122234445555554443
Q ss_pred E
Q psy3710 420 I 420 (424)
Q Consensus 420 ~ 420 (424)
.
T Consensus 303 ~ 303 (307)
T 1zi0_A 303 Q 303 (307)
T ss_dssp E
T ss_pred E
Confidence 3
No 374
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=22.63 E-value=3.8e+02 Score=23.20 Aligned_cols=193 Identities=8% Similarity=0.136 Sum_probs=93.0
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEECCCccee-------eEEec------ceeeeeecCCCCeEEEEeecCCeEEEE
Q psy3710 187 PLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL-------NELRR------GLCVLCPNSNNSLLAFPGRKSGHVHLV 253 (424)
Q Consensus 187 ~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~~dg~i~i~ 253 (424)
.|..++-. ....+....+|. |+.|-....-.+ ...+. ......+....... ++-..+|.|+.|
T Consensus 122 ~i~~ia~G--~~h~~alt~~G~-v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~hs-~alt~~G~v~~w 197 (406)
T 4d9s_A 122 RIKQIACG--DSHCLAVTMEGE-VQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHT-AAVTEDGDLYGW 197 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTSC-EEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEE-EEEETTSCEEEE
T ss_pred CEEEEEEC--hhheEEEcCCCc-EEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCCCeE-EEEeCCCCEEEe
Confidence 56666543 345566678898 999965432100 00110 11222222222222 235688999999
Q ss_pred eCCCCCCCC----------eeec-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEECCCCce------------------
Q psy3710 254 DLADPERPP----------LDIA-AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK------------------ 304 (424)
Q Consensus 254 d~~~~~~~~----------~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~~i~iwd~~~~~~------------------ 304 (424)
-.....+.- ..+. .....|..++.. ..+.+.-..+|. |..|-....-.
T Consensus 198 G~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~-v~~wG~n~~GqlG~g~~~~~~~p~~v~~~ 274 (406)
T 4d9s_A 198 GWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGA-LYTYGWSKYGQLGHGDLEDHLIPHKLEAL 274 (406)
T ss_dssp ECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCC-EEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred eCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCC-EEEeeCCCCCCCCCCCCcCccccEEeccc
Confidence 755432110 0111 112345555543 335555667888 88886543111
Q ss_pred ----eeeeccCCcEEEEEeCCCcEEEEEccccccccccccceeeeccCccccCCceeeEEeec-CCCceEEEEecCCCeE
Q psy3710 305 ----LNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIP-SDPPCICAFGADSNSI 379 (424)
Q Consensus 305 ----~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l 379 (424)
+..+.......++-..||.|+.|=.....++..-..... ..|. .+..+ ...+. .++.-....
T Consensus 275 ~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~--~~p~---------~v~~~~~~~v~--~va~G~~hs 341 (406)
T 4d9s_A 275 SNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ--CSPV---------QVRFPDDQKVV--QVSCGWRHT 341 (406)
T ss_dssp TTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCE--EEEE---------EECCGGGCCEE--EEEECSSEE
T ss_pred CCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCC--ccCE---------EEeccCCCcEE--EEEeCCCeE
Confidence 112222334455556899999998765433322111000 0010 01111 11233 333334455
Q ss_pred EEEeccCcEEEEEecCCcce
Q psy3710 380 IVICADGSYYKFMFNSKGEC 399 (424)
Q Consensus 380 ~~~~~dg~v~~~~~~~~~~~ 399 (424)
+....||.|+.|=.+..+++
T Consensus 342 ~alt~~G~v~~wG~n~~GqL 361 (406)
T 4d9s_A 342 LAVTERNNVFAWGRGTNGQL 361 (406)
T ss_dssp EEEETTSCEEEEECCTTSTT
T ss_pred EEEeCCCCEEEecCCCCCcc
Confidence 55678999999987765443
No 375
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.29 E-value=3.9e+02 Score=24.14 Aligned_cols=27 Identities=4% Similarity=0.022 Sum_probs=22.7
Q ss_pred CCCceEEEEecCCCeEEEEeccCcEEE
Q psy3710 364 SDPPCICAFGADSNSIIVICADGSYYK 390 (424)
Q Consensus 364 ~~~~~~~~~s~~~~~l~~~~~dg~v~~ 390 (424)
..+|..|.++++..+|++++.++.+++
T Consensus 461 ~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467889999999999999998876654
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.18 E-value=1.2e+02 Score=27.80 Aligned_cols=77 Identities=8% Similarity=-0.035 Sum_probs=45.9
Q ss_pred ceEEEEECCCCCeeEeecCCeEEEEeCCcCcccccc-----------------------cccCCCeeeEEEeccCceEEE
Q psy3710 12 GLLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQ-----------------------DFTDGGLGHVEMLFRCNYLAL 68 (424)
Q Consensus 12 ~V~~~~~s~~g~~la~g~~~~i~iw~~~~~~~~~~~-----------------------~~~~~~i~~~~~~~~~~~l~~ 68 (424)
.+..+..++++..|.+|..+.|...+.+-....... ...+.....+...+.++.|++
T Consensus 19 ~~~~l~~d~~~g~lyvGA~n~ly~Ls~~L~~~~~~~tgP~~ds~~C~p~~~~~~C~~~~~~~dN~nkvLl~~~~~~~L~~ 98 (539)
T 3al9_A 19 TFNHLTVHRRTGAVYVGAINRVYKLTGNLTIQVAHKTGPEEDNKACYPPLIVQPCSEVLTLTNNVNKLLIIDYSENRLLA 98 (539)
T ss_dssp CEEEEEECTTTCCEEEEETTEEEEECTTCCEEEEEECCCEEECTTCSSCTTTSCCCSCCEEECCCEEEEEEEGGGTEEEE
T ss_pred cEEEEEEeCCCCEEEEEEeeeEEECCCCcccccccccCCccCcccccCccchhhccccCCCCCceEEEEEEecCCCeEEE
Confidence 589999999999999999998665553211000000 001122222344466777777
Q ss_pred EeCCcCCCcCCCeEEEEECCCCcEE
Q psy3710 69 VGGGTHPKYPNNRVMIWDDLKKQVV 93 (424)
Q Consensus 69 ~~~~~~~~~~d~~i~iwd~~~~~~~ 93 (424)
+|.. ..+...++++.+...+
T Consensus 99 CGS~-----~qg~C~~~~l~~~~~~ 118 (539)
T 3al9_A 99 CGSL-----YQGVCKLLRLDDLFIL 118 (539)
T ss_dssp EESS-----TTTCEEEEETTTCCEE
T ss_pred eecC-----CCCCceeEeccccccc
Confidence 7754 4788888887665433
Done!