RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3710
(424 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 61.3 bits (147), Expect = 6e-11
Identities = 36/286 (12%), Positives = 82/286 (28%), Gaps = 13/286 (4%)
Query: 18 FNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77
+ D +DG ++ D + + + + +
Sbjct: 63 WGTDSRLLVSASQDG-KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA---CGGLD 118
Query: 78 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFET 137
+ + V + E + R + T + T
Sbjct: 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178
Query: 138 NPNPKGLCVLCPNSNN-SLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 196
V+ + + L G L D+ + HE+ ++ I
Sbjct: 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPN 237
Query: 197 GTRLATASYKGTL----IRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHL 252
G AT S T +R + + G+ + + + LL G + ++
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNV 296
Query: 253 VDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298
D + +A H+ +SC+ + G +AT S+ +++++
Sbjct: 297 WDALKAD-RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF-LKIWN 340
Score = 33.9 bits (76), Expect = 0.033
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 4/151 (2%)
Query: 260 RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSY---LC 316
R + H A + + L +AS G + ++D+ + K++ + SS+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK-LIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 317 VSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADS 376
+ V +D I + + + + + D I D+
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 377 NSIIVICADGSYYKFMFNSKGECWRDVYIQF 407
+ G G+
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Score = 30.5 bits (67), Expect = 0.40
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 176 RPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 224
R + H A + + L +AS G + ++D+ + K++ +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGK-LIIWDSYTTNKVHAI 93
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 57.1 bits (136), Expect = 1e-09
Identities = 36/304 (11%), Positives = 95/304 (31%), Gaps = 34/304 (11%)
Query: 18 FNQDQGCFACGMEDGF-RIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPK 76
F+ ED ++++ + + GH + + ++
Sbjct: 25 FHPVFSVMVSASEDATIKVWDYETGDFERTLK------GHTDSVQDISFDHSGKLLASCS 78
Query: 77 YPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFE 136
+ + + + V V + + +V K + V
Sbjct: 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 138
Query: 137 TNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQT 196
+ + + ++ PN + +L+A V + +A E ++ H + CI+
Sbjct: 139 FTGHREWVRMVRPNQDGTLIAS-CSNDQTVRVWVVATKE-CKAELREHRHVVECISWAPE 196
Query: 197 GTRLATASYKGTL-------------------IRVFDTGSGQKLNELR---RGLCVLCPN 234
+ + + G+ I+++D +G L L + + +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256
Query: 235 SNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLI 294
S + + + D + + AHE ++ + ++T + T S T +
Sbjct: 257 SGGKFILS-CADDKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT-V 313
Query: 295 RVFD 298
+V++
Sbjct: 314 KVWE 317
Score = 48.6 bits (114), Expect = 7e-07
Identities = 35/243 (14%), Positives = 81/243 (33%), Gaps = 19/243 (7%)
Query: 173 DPERPPL-DIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR-RGLCV 230
P P ++ H +P++ + + + + +AS T I+V+D +G L+ V
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDAT-IKVWDYETGDFERTLKGHTDSV 62
Query: 231 LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYK 290
+ ++S + + + H+ +S +++ G + +AS
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 291 GTLIRVFDTGSGQKLNELR------------RDSSYLCVSSDHGTVHVFSVDEAQKINKQ 338
T I++++ +G + +D + + S+ TV V+ V +
Sbjct: 123 KT-IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--- 178
Query: 339 SSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGE 398
+ L + + S + I ++ + K S G
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 238
Query: 399 CWR 401
C
Sbjct: 239 CLM 241
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 50.2 bits (118), Expect = 2e-07
Identities = 29/283 (10%), Positives = 68/283 (24%), Gaps = 22/283 (7%)
Query: 133 HVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLD-IAAHEAPLSCI 191
H F P + N + + +A + VH+ + + + + + H ++ +
Sbjct: 3 HSFLVEP----ISCHAWNKDRTQIAI-CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGV 57
Query: 192 ALNQTGTRLATASYKGTLIRVFDTGSGQKL----NELRRGLCVLCPNSNNSLLAFPGRKS 247
R+ T V+ + N G S
Sbjct: 58 DWAPDSNRIVTCGTDRN-AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116
Query: 248 GHVHLVDLADPER---PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQK 304
+ + + + + + LA S R+F +
Sbjct: 117 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK-CRIFSAYIKEV 175
Query: 305 LNELRR-------DSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSF 357
L S V V + ++ + ++ S + +
Sbjct: 176 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA 235
Query: 358 CKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECW 400
P + +S++ D F ++S
Sbjct: 236 VATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKL 278
Score = 43.7 bits (101), Expect = 3e-05
Identities = 17/151 (11%), Positives = 39/151 (25%), Gaps = 15/151 (9%)
Query: 271 PLSCIALNQTGTRLATASYKGTLIRVFD--TGSGQKLNELR------------RDSSYLC 316
P+SC A N+ T++A + +++ +++EL+ DS+ +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHE-VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 317 VSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADS 376
+V+++ L + +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 377 NSIIVICADGSYYKFMFNSKGECWRDVYIQF 407
N V + S V +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 158
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 47.5 bits (111), Expect = 1e-06
Identities = 32/319 (10%), Positives = 73/319 (22%), Gaps = 42/319 (13%)
Query: 25 FACGMEDG-FRIYNCDPLKEKERQDFTDG-----GLGHVEMLFRCNYLALVGGGT----- 73
+A + + + R D + L + LA+
Sbjct: 49 YATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELT 108
Query: 74 HPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLH 133
H + RV ++D E + + RD + G + +
Sbjct: 109 HFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVE 168
Query: 134 VFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIAL 193
P+
Sbjct: 169 DKPIQSWEAETYA-QPDVLAVWNQHESSGVMATPFY----------------------TA 205
Query: 194 NQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLC-PNSNNSLLAFPGRKSGHVHL 252
+ +Y+ + D +G+ R + V + N +
Sbjct: 206 RKDIDPADPTAYRTG-LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLES 264
Query: 253 VDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDS 312
DL + + ++ G+ + G + +D + +K ++
Sbjct: 265 FDLEKNA--SIKRVPLPHSYYSVNVSTDGSTVWLGGALGD-LAAYDAETLEKKGQVDLPG 321
Query: 313 SYLCVSSDHGTVHVFSVDE 331
+ S +V +F+ DE
Sbjct: 322 N---ASMSLASVRLFTRDE 337
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 44.3 bits (103), Expect = 1e-05
Identities = 15/130 (11%), Positives = 37/130 (28%), Gaps = 10/130 (7%)
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG----LCVLCPNSNNSL 239
+ ATA D +G+ + + +
Sbjct: 207 FSMLYTIARFKDDKQDPATADLLYG-YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN 265
Query: 240 LAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDT 299
+ + DL + + A + C+A ++ G +L + VF+
Sbjct: 266 QIYGV--LNRLAKYDLKQRK--LIKAANLDHTYYCVAFDKKGDKLYLGGTFND-LAVFNP 320
Query: 300 GSGQKLNELR 309
+ +K+ ++
Sbjct: 321 DTLEKVKNIK 330
Score = 40.5 bits (93), Expect = 2e-04
Identities = 12/95 (12%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 131 QLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSC 190
+ H E + + + + + DL + + A + C
Sbjct: 241 KTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK--LIKAANLDHTYYC 296
Query: 191 IALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225
+A ++ G +L + VF+ + +K+ ++
Sbjct: 297 VAFDKKGDKLYLGGTFND-LAVFNPDTLEKVKNIK 330
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 43.6 bits (101), Expect = 2e-05
Identities = 36/324 (11%), Positives = 75/324 (23%), Gaps = 52/324 (16%)
Query: 18 FNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEML----------------F 61
F+ D A G ++Y R E L F
Sbjct: 70 FSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF 129
Query: 62 RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIK 121
+ L G + + + + + G
Sbjct: 130 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG---SGDRT 186
Query: 122 VYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER----- 176
V + Q + + + + P + A G V + D
Sbjct: 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA--GSLDRAVRVWDSETGFLVERLD 244
Query: 177 -PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL-------------- 221
H+ + + + G + + S + +++++ +
Sbjct: 245 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANNKSDSKTPNSGTCEVT 303
Query: 222 -NELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIA---- 276
+ + + N+ + G K V D P L + H + +A
Sbjct: 304 YIGHKDFVLSVATTQNDEYILS-GSKDRGVLFWDKKSGN-PLLMLQGHRNSVISVAVANG 361
Query: 277 --LNQTGTRLATASYKGTLIRVFD 298
L AT S R++
Sbjct: 362 SSLGPEYNVFATGSGDCK-ARIWK 384
Score = 43.2 bits (100), Expect = 4e-05
Identities = 35/294 (11%), Positives = 76/294 (25%), Gaps = 34/294 (11%)
Query: 129 PQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAA---HE 185
P + P P L L S L + + + L + A P +++ H
Sbjct: 5 PYNQRANHSKPIPPFLLDLDSQSVPDAL--KKQTNDYYILYNPALPREIDVELHKSLDHT 62
Query: 186 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGR 245
+ + C+ + G LAT K +V+ G + L N + + P
Sbjct: 63 SVVCCVKFSNDGEYLATGCNKT--TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS- 119
Query: 246 KSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKL 305
+ + + + G LAT + + +
Sbjct: 120 ----------------------SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM 157
Query: 306 NELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSD 365
+ + + S + + L +
Sbjct: 158 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS--PG 215
Query: 366 PPCICAFGADSNSIIVICADGSYYKFMFNSKGECWR--DVYIQFLEMTNDSNLL 417
A G+ ++ V ++ + +S+ E + + T D +
Sbjct: 216 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 269
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 42.3 bits (97), Expect = 6e-05
Identities = 14/133 (10%), Positives = 34/133 (25%), Gaps = 1/133 (0%)
Query: 268 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVF 327
H ++ ++ + G L +A +G I +D +G + + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69
Query: 328 SVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGS 387
K + ++ + + A I I + G
Sbjct: 70 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129
Query: 388 YYKFMFNSKGECW 400
+ + C
Sbjct: 130 LTEVPISYNSSCV 142
Score = 40.7 bits (93), Expect = 2e-04
Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG 227
H ++ ++ + G L +A +G I +D +G
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRVFPDV 53
Score = 26.9 bits (57), Expect = 4.5
Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%)
Query: 125 FIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP-ERPPLDIAA 183
+ +L + S +++ G V + ++ P + P + A
Sbjct: 207 SVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGA 266
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFD 214
H + T + +A I+ ++
Sbjct: 267 HAMSSVNSVIWLNETTIVSAGQDSN-IKFWN 296
Score = 26.9 bits (57), Expect = 5.1
Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 244 GRKSGHVHLVDLADP-ERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298
G V + ++ P + P + AH + T + +A I+ ++
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN-IKFWN 296
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 41.7 bits (96), Expect = 1e-04
Identities = 32/206 (15%), Positives = 58/206 (28%), Gaps = 20/206 (9%)
Query: 18 FNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKY 77
D G D + DP E + F ++
Sbjct: 143 VQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL------ 195
Query: 78 PNNRVMIWD-DLKKQVVICLEFNAPVKGVRLRRDKIVVVLE-GLIKVYTFIQCPQQLHVF 135
+ + +WD + + + G+ L+ + +V +K++ +
Sbjct: 196 -DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 254
Query: 136 ETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPER----PPLDIAAHEAPLSCI 191
N + + L N N + + G V L DL E L+ + I
Sbjct: 255 GPNKHQSAVTCLQFNKNFVITSS---DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 311
Query: 192 ALNQTGTRLATASYKGTL---IRVFD 214
+ T A S GT + V D
Sbjct: 312 RASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 38.6 bits (88), Expect = 0.001
Identities = 36/227 (15%), Positives = 71/227 (31%), Gaps = 20/227 (8%)
Query: 82 VMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNPNP 141
V + + V+ A R + + ++KV+ + LH + +
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD-PETETCLHTLQGHT-- 177
Query: 142 KGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLA 201
+ + + G + + D+ + + H++ S + L L
Sbjct: 178 ---NRVYSLQFDGIHVVSGSLDTSIRVWDV-ETGNCIHTLTGHQSLTSGMELK--DNILV 231
Query: 202 TASYKGTLIRVFDTGSGQKLNELRRGLC---VLCPNSNNSLLAFPGRKSGHVHLVDLADP 258
+ + T ++++D +GQ L L+ + N G V L DL
Sbjct: 232 SGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTG 290
Query: 259 ER----PPLDIAAHEAPLSCIALNQTGTRLATASYKGTL---IRVFD 298
E L+ + I + T A S GT + V D
Sbjct: 291 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 35.9 bits (81), Expect = 0.007
Identities = 39/291 (13%), Positives = 95/291 (32%), Gaps = 27/291 (9%)
Query: 80 NRVMIWDDLKKQVVICLE-FNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETN 138
N + +W + + + L V ++R + I+ + + +H +
Sbjct: 37 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 96
Query: 139 PNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGT 198
+ L + + D E + + G
Sbjct: 97 TSTVRCMHLHEKRVV--------SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR 148
Query: 199 RLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP 258
R+ + +Y ++V+D + L+ L+ + + + G + + D+ +
Sbjct: 149 RVVSGAYDFM-VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV-ET 206
Query: 259 ERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR-------- 310
+ H++ S + L L + + T ++++D +GQ L L+
Sbjct: 207 GNCIHTLTGHQSLTSGMELK--DNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAV 263
Query: 311 -----DSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWS 356
+ +++ SSD GTV ++ + + I +L S + S
Sbjct: 264 TCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRAS 314
Score = 34.0 bits (76), Expect = 0.030
Identities = 16/148 (10%), Positives = 42/148 (28%), Gaps = 8/148 (5%)
Query: 260 RPPLDIAAHEAP-LSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVS 318
+ P + H+ ++C+ G R+ + S T ++V+ +G+ L L + + S
Sbjct: 7 KSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNT-LKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 319 SDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNS 378
+ + + + +S+ + + D+
Sbjct: 64 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH----EKRVVSGSRDATL 119
Query: 379 IIVICADGSYYKFMFNSKGECWRDVYIQ 406
+ G + Y
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDG 147
Score = 33.2 bits (74), Expect = 0.050
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 176 RPPLDIAAHEAP-LSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225
+ P + H+ ++C+ G R+ + S T ++V+ +G+ L L
Sbjct: 7 KSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNT-LKVWSAVTGKCLRTLV 54
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 40.6 bits (93), Expect = 2e-04
Identities = 13/142 (9%), Positives = 34/142 (23%), Gaps = 14/142 (9%)
Query: 178 PLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCV------- 230
P I + L Y + + + R + +
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 231 -LCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASY 289
+ + + + G + D+ + + + L+ + L+ +
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKD 334
Query: 290 KGTLIRVFDTGSGQKLNELRRD 311
G I F + + D
Sbjct: 335 DGK-IYTFPLEKPEDERTVETD 355
Score = 36.8 bits (83), Expect = 0.004
Identities = 7/77 (9%), Positives = 21/77 (27%), Gaps = 6/77 (7%)
Query: 148 CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 207
+ + + G + D+ + + + L+ + L+ + G
Sbjct: 282 PVHGEFAAYYQGAPEKGVLLKYDVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDG 336
Query: 208 TLIRVFDTGSGQKLNEL 224
I F + +
Sbjct: 337 K-IYTFPLEKPEDERTV 352
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 39.8 bits (91), Expect = 4e-04
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 7/68 (10%)
Query: 267 AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSY------LCVSSD 320
A + +S I + + + L S+ G+ + V+ K +L + Y +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGS-LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 321 HGTVHVFS 328
Sbjct: 68 TDLQIYVG 75
Score = 38.7 bits (88), Expect = 0.001
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 183 AHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGL------CVLCPNSN 236
A + +S I + + + L S+ G+ + V+ K +L + L N
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGS-LTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67
Query: 237 NSLLAFPGRKSGHVHL 252
L + G G +
Sbjct: 68 TDLQIYVGTVQGEILK 83
Score = 27.1 bits (58), Expect = 4.0
Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 19/97 (19%)
Query: 311 DSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCIC 370
S L ++S G++ V+ D K + L C C
Sbjct: 22 SKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSLRYKHPLLC-----------C 62
Query: 371 AFGADSNSIIVICADGSYYKFMFNSKGECWRDVYIQF 407
F +++ I + + ++ +
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNE 99
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 37.9 bits (86), Expect = 0.002
Identities = 8/115 (6%), Positives = 24/115 (20%), Gaps = 44/115 (38%)
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFP 243
HE+ + + G + + + T G + + +
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSK------------------ 304
Query: 244 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFD 298
+ + ++ + T S V++
Sbjct: 305 ------------------------ESSSVLSCDISVDDKYIVTGSGDKK-ATVYE 334
Score = 35.6 bits (80), Expect = 0.009
Identities = 5/92 (5%), Positives = 23/92 (25%), Gaps = 4/92 (4%)
Query: 123 YTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA 182
+ + ++ + + + L K ++ + +
Sbjct: 247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS-TGKDNLLNAWRTPYGA--SIFQS 303
Query: 183 AHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214
+ + ++ + T S V++
Sbjct: 304 KESSSVLSCDISVDDKYIVTGSGDKK-ATVYE 334
Score = 32.5 bits (72), Expect = 0.084
Identities = 18/114 (15%), Positives = 30/114 (26%), Gaps = 8/114 (7%)
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLC--PNSNNSLLA 241
P + G LI +++N L G V ++ +
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 67
Query: 242 FPGRKSGHVHLVDLADP----ERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 291
G G V + D++ P LD + + L G L
Sbjct: 68 TGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
Score = 30.2 bits (66), Expect = 0.43
Identities = 15/152 (9%), Positives = 37/152 (24%), Gaps = 8/152 (5%)
Query: 268 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVF 327
H + + ++ + T ++V+D + + + + + ++
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGKGC--VKVWDISHPGNKSPVSQ------LDCLNRDNYIR 101
Query: 328 SVDEAQKINKQSSLASASFLPKYFSSSWSFCKFQIPSDPPCICAFGADSNSIIVICADGS 387
S AS L + ++ + + C A S V + S
Sbjct: 102 SCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 161
Query: 388 YYKFMFNSKGECWRDVYIQFLEMTNDSNLLSC 419
Q +S
Sbjct: 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193
Score = 27.5 bits (59), Expect = 3.1
Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 6/113 (5%)
Query: 99 NAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAF 158
+ P + D + + P+ T + + +C + ++ +
Sbjct: 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYT 68
Query: 159 PGRKSGHVHLVDLADP----ERPPLDIAAHEAPLSCIALNQTGTRLATASYKG 207
G G V + D++ P LD + + L G L
Sbjct: 69 GG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 37.1 bits (84), Expect = 0.003
Identities = 39/322 (12%), Positives = 76/322 (23%), Gaps = 38/322 (11%)
Query: 13 LLYAGFNQDQGCFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGG 72
+ D +++ L + D V +L G
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV--GTYPWMTSLTPDG 117
Query: 73 THPKYPN----NRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQC 128
+ V + D K L+ D +
Sbjct: 118 KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 177
Query: 129 PQQLHVFETNPNPKGLCVL---CPNSNNSLLAFPGRKSGHVHLVDLADPERPPLD-IAAH 184
+ T L S + +G +H +DL+ + L + A
Sbjct: 178 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEAL 237
Query: 185 EAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSNNSLLAFPG 244
G + I + +
Sbjct: 238 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW---------------------RHK 276
Query: 245 RKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL--ATASYKGTLIRVFDTGSG 302
S V ++D ER L + I ++Q L A ++ T + + D SG
Sbjct: 277 TASRFVVVLDAKTGER--LAKFEMGHEIDSINVSQDEKPLLYALSTGDKT-LYIHDAESG 333
Query: 303 QKLNELRRDSSY--LCVSSDHG 322
++L + + + ++D G
Sbjct: 334 EELRSVNQLGHGPQVITTADMG 355
Score = 28.2 bits (61), Expect = 1.7
Identities = 22/192 (11%), Positives = 48/192 (25%), Gaps = 20/192 (10%)
Query: 244 GRKSGHVHLVDLADPERPPLD-IAAHEAPLSCIALNQTGTRLATASYKGTL--------- 293
++D + I P + G+ +A AS +
Sbjct: 24 FAAVTQQFVIDGEAGR--VIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 294 IRVFDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSS 353
+ VFD + ++ + + + + + D + Q S A A +
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 139
Query: 354 SW------SFCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDVYIQF 407
++ C P+ P D + V + + I
Sbjct: 140 AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINH 199
Query: 408 LEMTNDSNLLSC 419
+ + L
Sbjct: 200 PAYSQKAGRLVW 211
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 35.7 bits (80), Expect = 0.008
Identities = 7/92 (7%), Positives = 24/92 (26%), Gaps = 2/92 (2%)
Query: 123 YTFIQCPQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIA 182
+ + L G ++ + + P + +
Sbjct: 196 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN 255
Query: 183 AHEAPLSCIALNQTGTRLATASYKGTLIRVFD 214
AH+ ++ + L ++ I+ ++
Sbjct: 256 AHKDGVNNLLWETPS-TLVSSGADAC-IKRWN 285
Score = 34.5 bits (77), Expect = 0.017
Identities = 7/70 (10%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 229 CVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATAS 288
L G ++ + + P + + AH+ ++ + L ++
Sbjct: 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSG 276
Query: 289 YKGTLIRVFD 298
I+ ++
Sbjct: 277 ADAC-IKRWN 285
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 33.3 bits (74), Expect = 0.044
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Query: 130 QQLHVFETNPNPKG--LCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAP 187
Q +F + P VL + + S V+ V + + H
Sbjct: 4 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTS--VYTVPVGSLTDTEI-YTEHSHQ 60
Query: 188 LSCIALNQTGTRLATASYKGTLIRVF 213
+ + +G A+ G +
Sbjct: 61 TTVAKTSPSGYYCASGDVHGNVRIWD 86
Score = 33.0 bits (73), Expect = 0.067
Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 225 RRGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRL 284
R VL + + S V+ V + + H + + +G
Sbjct: 17 RGTAVVLGNTPAGDKIQYCNGTS--VYTVPVGSLTDTEI-YTEHSHQTTVAKTSPSGYYC 73
Query: 285 ATASYKGTLIRVF 297
A+ G +
Sbjct: 74 ASGDVHGNVRIWD 86
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 31.7 bits (70), Expect = 0.14
Identities = 5/42 (11%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 184 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 225
+ C+ + ++ + T I+++D + + L
Sbjct: 14 TSKGVYCLQYD--DQKIVSGLRDNT-IKIWDKNTLECKRILT 52
Score = 31.7 bits (70), Expect = 0.14
Identities = 5/42 (11%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Query: 268 HEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR 309
+ C+ + ++ + T I+++D + + L
Sbjct: 14 TSKGVYCLQYD--DQKIVSGLRDNT-IKIWDKNTLECKRILT 52
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 31.8 bits (70), Expect = 0.15
Identities = 22/170 (12%), Positives = 46/170 (27%), Gaps = 21/170 (12%)
Query: 261 PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSG--QKLNELR--------- 309
PP + + ++ + T +A K +R D G + +
Sbjct: 10 PPQ-PSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTT 68
Query: 310 ------RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKY---FSSSWSFCKF 360
+ S YLC + G V V+ ++ N + F SW F
Sbjct: 69 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR 128
Query: 361 QIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDVYIQFLEM 410
++ FG + + + ++ + +
Sbjct: 129 RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178
Score = 30.7 bits (67), Expect = 0.31
Identities = 23/224 (10%), Positives = 50/224 (22%), Gaps = 37/224 (16%)
Query: 177 PPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRGLCVLCPNSN 236
PP + + ++ + T +A K +R D G
Sbjct: 10 PPQ-PSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS----------------KV 52
Query: 237 NSLLAFPGRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRV 296
++ F G S V V + + L + G +I
Sbjct: 53 PPVVQFTGHGSSVVTTV--------------------KFSPIKGSQYLCSGDESGKVIVW 92
Query: 297 FDTGSGQKLNELRRDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWS 356
T + + S V + + + + + + + S +
Sbjct: 93 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSL 152
Query: 357 FCKFQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECW 400
+ + + DGS +
Sbjct: 153 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 196
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 30.6 bits (67), Expect = 0.31
Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 160 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 219
+S ++ ++D+ + I P+ ++ GT++ A+ + + DT +
Sbjct: 8 NSESDNISVIDVTSNKVT-ATIPVGSNPMG-AVISPDGTKVYVANAHSNDVSIIDTATNN 65
Score = 30.6 bits (67), Expect = 0.31
Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 244 GRKSGHVHLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQ 303
+S ++ ++D+ + I P+ ++ GT++ A+ + + DT +
Sbjct: 8 NSESDNISVIDVTSNKVT-ATIPVGSNPMG-AVISPDGTKVYVANAHSNDVSIIDTATNN 65
Score = 28.3 bits (61), Expect = 1.6
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 181 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRRG 227
I P + IA+ G ++ A + V DT + + G
Sbjct: 240 IPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG 285
Score = 28.3 bits (61), Expect = 1.8
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 265 IAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNEL 308
I P + IA+ G ++ A + V DT + +
Sbjct: 240 IPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 29.2 bits (64), Expect = 1.1
Identities = 18/165 (10%), Positives = 30/165 (18%), Gaps = 37/165 (22%)
Query: 251 HLVDLADPERPPLDIAAHEAPLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELR- 309
L PE P L+ T G I + D S + + +
Sbjct: 10 SWKVLVKPEDRPKKQL--------NDLDLPNLFSVTLRDAGQ-IALVDGDSKKIVKVIDT 60
Query: 310 ----------RDSSYLCVSSDHGTVHVFSVDEAQKINKQSSLASASFLPKYFSSSWSFCK 359
YL V + + + +
Sbjct: 61 GYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-----------------KVAEIKI 103
Query: 360 FQIPSDPPCICAFGADSNSIIVICADGSYYKFMFNSKGECWRDVY 404
G + I + M E + V
Sbjct: 104 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 148
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus
amyloliquefaciens [TaxId: 1390]}
Length = 353
Score = 26.9 bits (59), Expect = 5.2
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 14/136 (10%)
Query: 129 PQQLHVFETNPNPKGLCVLCPNSNNSLLAFPGRKSGHVHLVDLADP---ERPPLDIAAHE 185
PQ + TN GL V + +L +G ++ VD+ +DIAA
Sbjct: 38 PQNSKLITTNKK-SGLAVY--SLEGKMLHS--YHTGKLNNVDIRYDFPLNGKKVDIAA-- 90
Query: 186 APLSCIALNQTGTRLATASYKGTLIRVFDTGSGQKLNELRR--GLCVLCPNSNNSLLAFP 243
S + + + K ++ + + + G + A
Sbjct: 91 --ASNRSEGKNTIEIYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMV 148
Query: 244 GRKSGHVHLVDLADPE 259
K G +L +
Sbjct: 149 TGKEGEFEQYELNADK 164
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide
ribonucleotide synthetase PurP {Methanocaldococcus
jannaschii [TaxId: 2190]}
Length = 238
Score = 26.6 bits (58), Expect = 5.5
Identities = 15/116 (12%), Positives = 33/116 (28%), Gaps = 2/116 (1%)
Query: 24 CFACGMEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVM 83
+ G + E E +++ L R + +P Y +
Sbjct: 77 EYVVGTNFCIHYFYSPLKDEVELLGMDKRYESNIDGLVRIPAKDQLEMNINPSYVITGNI 136
Query: 84 IWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQCPQQLHVFETNP 139
+ + E K V ++ + + G + + +L VFE +
Sbjct: 137 PVVIRESLLPQVFE--MGDKLVAKAKELVPPGMIGPFCLQSLCNENLELVVFEMSA 190
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.430
Gapped
Lambda K H
0.267 0.0505 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,609,789
Number of extensions: 75641
Number of successful extensions: 230
Number of sequences better than 10.0: 1
Number of HSP's gapped: 220
Number of HSP's successfully gapped: 59
Length of query: 424
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 336
Effective length of database: 1,199,356
Effective search space: 402983616
Effective search space used: 402983616
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.1 bits)