Query psy3712
Match_columns 109
No_of_seqs 108 out of 426
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 23:37:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vu4_A KMHSV2; beta-propeller 99.5 1.2E-13 4E-18 103.9 13.3 98 1-106 38-135 (355)
2 4aow_A Guanine nucleotide-bind 97.6 0.0076 2.6E-07 42.8 16.3 94 5-106 197-292 (340)
3 3frx_A Guanine nucleotide-bind 97.6 0.0073 2.5E-07 43.8 16.0 93 5-105 178-272 (319)
4 1gxr_A ESG1, transducin-like e 97.6 0.008 2.7E-07 42.4 15.4 89 4-99 164-255 (337)
5 3zwl_B Eukaryotic translation 97.5 0.0074 2.5E-07 43.0 14.8 88 5-99 56-151 (369)
6 4aez_A CDC20, WD repeat-contai 97.5 0.0059 2E-07 45.5 14.6 92 4-99 240-336 (401)
7 3dm0_A Maltose-binding peripla 97.4 0.0051 1.7E-07 49.4 14.1 95 4-106 542-638 (694)
8 3odt_A Protein DOA1; ubiquitin 97.4 0.0065 2.2E-07 42.5 13.0 88 4-99 206-296 (313)
9 3mmy_A MRNA export factor; mRN 97.4 0.015 5.2E-07 41.3 14.9 95 4-106 65-166 (368)
10 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.012 4.2E-07 44.1 14.9 94 4-107 300-398 (445)
11 1l0q_A Surface layer protein; 97.4 0.019 6.6E-07 41.8 15.5 96 3-106 12-111 (391)
12 1sq9_A Antiviral protein SKI8; 97.4 0.015 5E-07 42.4 14.8 99 4-107 208-329 (397)
13 4h5i_A Guanine nucleotide-exch 97.4 0.019 6.5E-07 42.7 15.7 95 3-102 104-209 (365)
14 2ynn_A Coatomer subunit beta'; 97.4 0.016 5.4E-07 41.7 14.7 95 4-105 36-134 (304)
15 1pgu_A Actin interacting prote 97.3 0.012 4.1E-07 45.2 14.8 96 4-107 184-290 (615)
16 4ggc_A P55CDC, cell division c 97.3 0.012 4.1E-07 41.3 13.4 89 5-99 223-315 (318)
17 4gga_A P55CDC, cell division c 97.3 0.018 6.1E-07 43.2 14.8 79 23-107 276-360 (420)
18 3v7d_B Cell division control p 97.3 0.02 6.9E-07 42.9 15.1 94 4-105 291-386 (464)
19 3ow8_A WD repeat-containing pr 97.3 0.018 6.2E-07 42.0 14.4 95 5-107 146-244 (321)
20 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.017 5.9E-07 43.3 14.3 90 4-102 340-445 (445)
21 3lrv_A PRE-mRNA-splicing facto 97.2 0.003 1E-07 46.1 9.8 89 4-99 150-244 (343)
22 3zwl_B Eukaryotic translation 97.2 0.02 6.9E-07 40.7 14.0 94 5-106 199-310 (369)
23 1sq9_A Antiviral protein SKI8; 97.2 0.018 6.1E-07 41.9 13.9 89 4-99 259-395 (397)
24 3vl1_A 26S proteasome regulato 97.2 0.015 5.2E-07 42.7 13.5 96 4-107 120-219 (420)
25 3gre_A Serine/threonine-protei 97.2 0.025 8.5E-07 42.1 14.7 96 4-107 193-299 (437)
26 4ery_A WD repeat-containing pr 97.2 0.032 1.1E-06 39.6 15.0 95 5-107 89-187 (312)
27 1got_B GT-beta; complex (GTP-b 97.1 0.035 1.2E-06 40.5 14.9 95 4-106 165-263 (340)
28 3ow8_A WD repeat-containing pr 97.1 0.021 7.2E-07 41.6 13.6 95 5-107 188-286 (321)
29 3mmy_A MRNA export factor; mRN 97.1 0.025 8.7E-07 40.1 13.6 90 5-102 110-202 (368)
30 1got_B GT-beta; complex (GTP-b 97.1 0.043 1.5E-06 40.0 15.2 94 5-106 208-307 (340)
31 3k26_A Polycomb protein EED; W 97.1 0.024 8.3E-07 40.3 13.4 88 5-99 97-192 (366)
32 1gxr_A ESG1, transducin-like e 97.1 0.036 1.2E-06 38.9 16.0 94 5-106 121-220 (337)
33 1r5m_A SIR4-interacting protei 97.1 0.019 6.5E-07 41.7 13.0 96 4-107 228-326 (425)
34 3mkq_A Coatomer beta'-subunit; 97.1 0.032 1.1E-06 44.7 15.2 94 5-105 37-134 (814)
35 1r5m_A SIR4-interacting protei 97.1 0.011 3.8E-07 42.9 11.4 88 4-98 311-424 (425)
36 3k26_A Polycomb protein EED; W 97.1 0.042 1.4E-06 39.1 14.3 96 4-107 45-154 (366)
37 1erj_A Transcriptional repress 97.0 0.061 2.1E-06 40.0 15.7 93 5-105 147-243 (393)
38 3bws_A Protein LP49; two-domai 97.0 0.061 2.1E-06 39.7 15.4 95 5-107 285-397 (433)
39 3vu4_A KMHSV2; beta-propeller 97.0 0.044 1.5E-06 40.4 14.3 71 22-99 194-271 (355)
40 4aez_A CDC20, WD repeat-contai 97.0 0.063 2.2E-06 39.8 15.5 96 3-105 113-211 (401)
41 2aq5_A Coronin-1A; WD40 repeat 97.0 0.064 2.2E-06 39.6 15.2 95 5-107 106-214 (402)
42 3bws_A Protein LP49; two-domai 97.0 0.057 1.9E-06 39.9 14.7 96 4-106 192-298 (433)
43 3ei3_B DNA damage-binding prot 96.9 0.044 1.5E-06 40.0 13.8 71 22-99 203-282 (383)
44 4ery_A WD repeat-containing pr 96.9 0.058 2E-06 38.3 15.6 96 4-107 46-145 (312)
45 1p22_A F-BOX/WD-repeat protein 96.9 0.081 2.8E-06 39.6 15.2 94 4-107 234-332 (435)
46 4a11_B DNA excision repair pro 96.9 0.051 1.8E-06 39.2 13.6 77 22-106 98-181 (408)
47 1l0q_A Surface layer protein; 96.9 0.073 2.5E-06 38.7 16.4 94 5-106 56-153 (391)
48 3jrp_A Fusion protein of prote 96.8 0.041 1.4E-06 39.3 12.6 90 4-100 34-135 (379)
49 4gga_A P55CDC, cell division c 96.7 0.062 2.1E-06 40.2 13.4 89 5-99 303-395 (420)
50 1pgu_A Actin interacting prote 96.7 0.025 8.5E-07 43.4 11.3 95 4-106 468-579 (615)
51 4a11_B DNA excision repair pro 96.7 0.0086 2.9E-07 43.4 8.2 77 22-106 42-137 (408)
52 1p22_A F-BOX/WD-repeat protein 96.7 0.072 2.4E-06 39.9 13.4 87 4-99 154-242 (435)
53 3v7d_B Cell division control p 96.6 0.13 4.4E-06 38.4 14.7 92 5-106 334-427 (464)
54 4g56_B MGC81050 protein; prote 96.6 0.049 1.7E-06 40.3 12.1 88 5-99 251-343 (357)
55 4gqb_B Methylosome protein 50; 96.6 0.1 3.6E-06 38.6 13.8 94 5-106 105-207 (344)
56 1nr0_A Actin interacting prote 96.5 0.099 3.4E-06 41.4 14.0 95 5-107 172-277 (611)
57 2pm9_A Protein WEB1, protein t 96.5 0.017 5.7E-07 42.3 8.9 70 23-99 165-249 (416)
58 3odt_A Protein DOA1; ubiquitin 96.5 0.11 3.8E-06 36.0 14.3 77 22-107 183-262 (313)
59 3vl1_A 26S proteasome regulato 96.5 0.15 5E-06 37.3 14.6 95 5-107 163-285 (420)
60 1yfq_A Cell cycle arrest prote 96.5 0.0082 2.8E-07 42.7 6.8 86 5-99 81-179 (342)
61 1yfq_A Cell cycle arrest prote 96.5 0.13 4.4E-06 36.4 13.9 97 3-107 170-289 (342)
62 3f3f_A Nucleoporin SEH1; struc 96.4 0.091 3.1E-06 36.5 12.0 88 5-99 35-143 (351)
63 4gqb_B Methylosome protein 50; 96.4 0.067 2.3E-06 39.7 11.6 95 5-107 151-253 (344)
64 1vyh_C Platelet-activating fac 96.4 0.18 6E-06 37.9 14.0 94 5-106 174-271 (410)
65 1k8k_C P40, ARP2/3 complex 41 96.4 0.087 3E-06 37.7 11.7 70 23-99 202-274 (372)
66 2vdu_B TRNA (guanine-N(7)-)-me 96.3 0.2 6.8E-06 37.7 14.2 69 24-98 308-390 (450)
67 3dw8_B Serine/threonine-protei 96.3 0.051 1.8E-06 40.1 10.6 70 23-99 226-315 (447)
68 3i2n_A WD repeat-containing pr 96.3 0.11 3.8E-06 36.7 12.1 59 33-98 178-242 (357)
69 4aow_A Guanine nucleotide-bind 96.3 0.14 4.7E-06 36.1 12.2 78 23-107 171-253 (340)
70 4h5i_A Guanine nucleotide-exch 96.3 0.057 2E-06 40.1 10.6 73 23-102 269-346 (365)
71 4ggc_A P55CDC, cell division c 96.2 0.17 5.8E-06 35.3 14.7 97 5-107 174-280 (318)
72 3sfz_A APAF-1, apoptotic pepti 96.1 0.23 8E-06 42.0 14.6 95 5-107 639-739 (1249)
73 1k8k_C P40, ARP2/3 complex 41 96.1 0.23 7.7E-06 35.4 13.5 95 5-107 120-240 (372)
74 2pbi_B Guanine nucleotide-bind 96.1 0.27 9.1E-06 36.1 14.9 94 5-106 222-321 (354)
75 2pbi_B Guanine nucleotide-bind 96.1 0.27 9.3E-06 36.0 15.3 93 5-105 178-276 (354)
76 3mbr_X Glutamine cyclotransfer 96.1 0.091 3.1E-06 38.6 10.6 65 39-107 33-101 (243)
77 1vyh_C Platelet-activating fac 96.1 0.3 1E-05 36.5 15.3 95 5-107 216-334 (410)
78 2ynn_A Coatomer subunit beta'; 96.1 0.24 8.2E-06 35.3 15.4 95 5-107 165-266 (304)
79 3f3f_A Nucleoporin SEH1; struc 96.0 0.23 7.8E-06 34.4 13.8 71 22-99 10-90 (351)
80 2vdu_B TRNA (guanine-N(7)-)-me 95.9 0.36 1.2E-05 36.3 15.7 86 4-97 221-337 (450)
81 2xzm_R RACK1; ribosome, transl 95.9 0.31 1.1E-05 35.3 13.6 70 22-98 212-284 (343)
82 3mkq_A Coatomer beta'-subunit; 95.9 0.37 1.3E-05 38.5 14.3 94 5-106 165-265 (814)
83 3i2n_A WD repeat-containing pr 95.9 0.16 5.5E-06 35.9 11.0 75 22-99 17-99 (357)
84 1pby_B Quinohemoprotein amine 95.8 0.28 9.6E-06 34.3 13.5 96 4-106 12-130 (337)
85 3frx_A Guanine nucleotide-bind 95.8 0.33 1.1E-05 34.9 14.1 95 5-107 89-192 (319)
86 3vgz_A Uncharacterized protein 95.7 0.23 7.8E-06 35.2 11.4 81 25-106 42-126 (353)
87 3gre_A Serine/threonine-protei 95.7 0.4 1.4E-05 35.4 13.5 66 34-107 181-252 (437)
88 4g56_B MGC81050 protein; prote 95.7 0.071 2.4E-06 39.4 8.9 95 5-107 163-265 (357)
89 2pm9_A Protein WEB1, protein t 95.7 0.13 4.4E-06 37.4 10.2 98 5-107 190-301 (416)
90 3lrv_A PRE-mRNA-splicing facto 95.5 0.33 1.1E-05 35.1 11.8 73 24-104 126-205 (343)
91 3ei3_B DNA damage-binding prot 95.5 0.43 1.5E-05 34.6 12.4 71 22-99 72-150 (383)
92 2oaj_A Protein SNI1; WD40 repe 95.5 0.45 1.6E-05 40.0 14.0 86 5-99 41-129 (902)
93 2xyi_A Probable histone-bindin 95.5 0.23 7.8E-06 37.3 11.2 89 5-99 256-353 (430)
94 2aq5_A Coronin-1A; WD40 repeat 95.5 0.48 1.6E-05 34.8 12.8 88 5-99 156-254 (402)
95 3u4y_A Uncharacterized protein 95.4 0.44 1.5E-05 33.6 14.0 94 5-106 22-123 (331)
96 3jro_A Fusion protein of prote 95.4 0.3 1E-05 39.9 12.2 88 5-99 33-132 (753)
97 3jrp_A Fusion protein of prote 95.2 0.52 1.8E-05 33.4 12.7 89 4-99 126-240 (379)
98 1pby_B Quinohemoprotein amine 95.1 0.52 1.8E-05 32.9 12.2 69 29-107 246-317 (337)
99 2ymu_A WD-40 repeat protein; u 95.1 0.83 2.8E-05 34.8 13.3 83 5-96 491-577 (577)
100 1jmx_B Amine dehydrogenase; ox 95.0 0.59 2E-05 32.9 12.4 67 26-98 45-133 (349)
101 3sfz_A APAF-1, apoptotic pepti 95.0 0.61 2.1E-05 39.4 13.2 96 5-106 681-780 (1249)
102 3dwl_C Actin-related protein 2 94.8 0.12 3.9E-06 37.4 7.4 89 4-99 34-131 (377)
103 1jmx_B Amine dehydrogenase; ox 94.8 0.68 2.3E-05 32.5 11.5 56 51-107 274-332 (349)
104 1erj_A Transcriptional repress 94.8 0.88 3E-05 33.6 14.9 73 26-106 126-202 (393)
105 3nol_A Glutamine cyclotransfer 94.7 0.22 7.4E-06 37.0 8.6 66 38-107 54-123 (262)
106 2oiz_A Aromatic amine dehydrog 94.7 0.27 9.3E-06 36.6 9.3 56 50-107 284-343 (361)
107 3nok_A Glutaminyl cyclase; bet 94.6 0.12 4E-06 38.7 7.1 62 39-107 67-132 (268)
108 2xyi_A Probable histone-bindin 94.6 1 3.5E-05 33.7 12.6 70 23-99 231-309 (430)
109 3dw8_B Serine/threonine-protei 94.5 0.89 3.1E-05 33.3 11.8 70 23-99 28-126 (447)
110 4gq1_A NUP37; propeller, trans 94.4 1.1 3.8E-05 33.2 13.0 89 4-99 112-218 (393)
111 2ymu_A WD-40 repeat protein; u 94.4 1.3 4.3E-05 33.8 13.6 75 22-106 15-93 (577)
112 3u4y_A Uncharacterized protein 94.2 0.97 3.3E-05 31.8 12.0 67 29-99 89-160 (331)
113 3iz6_a 40S ribosomal protein R 94.0 1.3 4.4E-05 32.6 12.8 75 23-105 249-334 (380)
114 2xzm_R RACK1; ribosome, transl 93.9 1.2 4.2E-05 32.0 14.0 69 23-98 76-148 (343)
115 2ojh_A Uncharacterized protein 93.8 0.48 1.6E-05 32.1 8.4 50 50-99 20-71 (297)
116 3dm0_A Maltose-binding peripla 93.8 2 6.7E-05 34.2 13.1 93 5-106 454-556 (694)
117 3dwl_C Actin-related protein 2 93.7 0.43 1.5E-05 34.4 8.5 88 4-98 78-176 (377)
118 2iwa_A Glutamine cyclotransfer 93.6 1.3 4.3E-05 32.6 10.9 66 38-107 33-102 (266)
119 3bg1_A Protein SEC13 homolog; 93.5 1.4 4.9E-05 31.4 11.2 88 5-99 37-136 (316)
120 1nir_A Nitrite reductase; hemo 93.4 2.3 7.9E-05 33.5 15.9 94 5-107 161-264 (543)
121 2oaj_A Protein SNI1; WD40 repe 93.4 0.78 2.7E-05 38.6 10.5 77 23-107 17-95 (902)
122 2oit_A Nucleoporin 214KDA; NH2 93.0 0.59 2E-05 35.8 8.6 72 24-100 93-182 (434)
123 4gq1_A NUP37; propeller, trans 92.9 0.7 2.4E-05 34.3 8.8 48 51-98 338-388 (393)
124 3sjl_D Methylamine dehydrogena 92.9 0.83 2.8E-05 35.4 9.4 58 49-107 308-370 (386)
125 2pm7_B Protein transport prote 92.8 1.8 6.2E-05 30.5 12.5 88 5-99 33-132 (297)
126 1ri6_A Putative isomerase YBHE 92.7 1.1 3.8E-05 31.3 9.2 91 3-99 60-160 (343)
127 2hes_X YDR267CP; beta-propelle 92.5 2.1 7.3E-05 30.7 12.5 69 23-98 153-229 (330)
128 3iz6_a 40S ribosomal protein R 92.4 2.4 8.3E-05 31.0 13.2 76 24-107 206-287 (380)
129 3vgz_A Uncharacterized protein 92.0 2.3 7.8E-05 29.9 15.5 71 29-107 236-310 (353)
130 3jro_A Fusion protein of prote 91.9 4.4 0.00015 32.9 13.8 88 5-99 79-189 (753)
131 3dsm_A Uncharacterized protein 91.7 2.2 7.4E-05 30.9 10.0 55 51-106 63-120 (328)
132 2mad_H Methylamine dehydrogena 91.4 1.4 4.8E-05 33.1 8.9 56 51-107 297-357 (373)
133 1qks_A Cytochrome CD1 nitrite 91.3 3.4 0.00012 33.1 11.6 67 35-107 166-236 (567)
134 1nir_A Nitrite reductase; hemo 91.2 3 0.0001 32.9 11.0 56 51-107 158-218 (543)
135 1bpo_A Protein (clathrin); cla 91.1 3.5 0.00012 33.3 11.2 69 29-105 71-142 (494)
136 1xip_A Nucleoporin NUP159; bet 90.8 4.5 0.00015 31.2 14.2 84 3-98 106-190 (388)
137 3c75_H MADH, methylamine dehyd 90.4 1.7 5.7E-05 34.0 8.7 57 50-107 348-409 (426)
138 3bg1_A Protein SEC13 homolog; 90.2 3.7 0.00013 29.2 11.2 70 23-99 13-90 (316)
139 2xzh_A Clathrin heavy chain 1; 90.2 5.4 0.00019 31.0 12.2 69 29-105 72-143 (365)
140 2hqs_A Protein TOLB; TOLB, PAL 90.0 4.8 0.00017 30.1 14.2 73 23-99 178-256 (415)
141 4e54_B DNA damage-binding prot 89.8 0.98 3.4E-05 33.7 6.7 71 23-99 250-327 (435)
142 1mda_H Methylamine dehydrogena 89.4 1 3.4E-05 34.4 6.6 55 52-107 294-353 (368)
143 2j04_B YDR362CP, TAU91; beta p 89.4 2.2 7.5E-05 33.7 8.7 95 4-106 288-392 (524)
144 2oit_A Nucleoporin 214KDA; NH2 89.1 5.4 0.00018 30.3 10.6 87 5-99 174-278 (434)
145 2oiz_A Aromatic amine dehydrog 89.0 1.9 6.4E-05 31.9 7.7 55 51-107 30-97 (361)
146 3fm0_A Protein CIAO1; WDR39,SG 88.6 5.3 0.00018 28.7 13.7 88 5-99 40-136 (345)
147 2j04_A TAU60, YPL007P, hypothe 88.3 5.6 0.00019 32.7 10.6 67 24-99 183-254 (588)
148 2hqs_A Protein TOLB; TOLB, PAL 88.1 6.7 0.00023 29.3 13.5 90 5-99 205-300 (415)
149 3nok_A Glutaminyl cyclase; bet 87.5 3.4 0.00012 30.6 8.2 57 50-107 114-171 (268)
150 2j04_A TAU60, YPL007P, hypothe 87.2 10 0.00035 31.1 11.6 69 25-100 131-212 (588)
151 3dsm_A Uncharacterized protein 87.0 6.9 0.00024 28.2 13.2 56 51-107 151-219 (328)
152 1ri6_A Putative isomerase YBHE 86.8 6 0.00021 27.4 12.5 90 3-98 15-114 (343)
153 2pm7_B Protein transport prote 86.5 6.5 0.00022 27.5 13.6 88 5-99 79-189 (297)
154 2z3z_A Dipeptidyl aminopeptida 86.2 4.6 0.00016 31.8 8.8 67 24-99 82-150 (706)
155 2w18_A PALB2, fancn, partner a 86.2 1.6 5.5E-05 33.7 6.0 47 51-97 304-355 (356)
156 3mbr_X Glutamine cyclotransfer 86.0 8.1 0.00028 28.0 13.5 57 50-107 83-140 (243)
157 2ojh_A Uncharacterized protein 85.1 6.6 0.00023 26.2 10.1 85 5-98 24-118 (297)
158 3fm0_A Protein CIAO1; WDR39,SG 84.7 9 0.00031 27.5 13.0 87 4-97 128-223 (345)
159 3nol_A Glutamine cyclotransfer 84.3 10 0.00035 27.9 11.7 57 50-107 105-162 (262)
160 2ecf_A Dipeptidyl peptidase IV 83.1 12 0.0004 29.6 9.9 64 27-99 112-181 (741)
161 1nr0_A Actin interacting prote 81.6 17 0.00058 28.4 15.7 74 23-104 239-317 (611)
162 1xip_A Nucleoporin NUP159; bet 81.6 16 0.00054 28.0 11.4 64 26-99 90-155 (388)
163 2w18_A PALB2, fancn, partner a 81.2 17 0.00057 28.0 12.8 56 50-106 201-275 (356)
164 3no2_A Uncharacterized protein 81.1 12 0.00042 26.5 9.1 47 51-97 14-63 (276)
165 2hes_X YDR267CP; beta-propelle 80.7 13 0.00044 26.4 15.3 87 5-98 36-137 (330)
166 4e54_B DNA damage-binding prot 80.6 15 0.00052 27.1 10.6 70 23-99 119-196 (435)
167 3g4e_A Regucalcin; six bladed 77.6 16 0.00054 25.7 9.6 58 34-98 23-81 (297)
168 3ei3_A DNA damage-binding prot 77.5 37 0.0012 29.8 12.7 64 36-100 845-914 (1158)
169 2ecf_A Dipeptidyl peptidase IV 76.6 22 0.00074 28.1 9.5 76 23-99 36-138 (741)
170 3c75_H MADH, methylamine dehyd 76.2 16 0.00053 28.4 8.4 54 52-107 99-165 (426)
171 2qe8_A Uncharacterized protein 74.3 20 0.00069 25.7 8.2 48 51-98 92-153 (343)
172 1xfd_A DIP, dipeptidyl aminope 72.1 23 0.00079 27.7 8.6 73 26-99 63-143 (723)
173 3ii7_A Kelch-like protein 7; p 72.0 9.7 0.00033 26.8 5.9 27 35-65 11-37 (306)
174 2mad_H Methylamine dehydrogena 71.1 29 0.001 25.7 9.6 53 53-107 48-113 (373)
175 1mda_H Methylamine dehydrogena 70.5 24 0.00084 26.6 8.1 53 53-107 47-112 (368)
176 3sjl_D Methylamine dehydrogena 70.3 24 0.00083 27.1 8.2 55 52-107 109-176 (386)
177 3ei3_A DNA damage-binding prot 69.5 58 0.002 28.5 12.0 89 5-104 866-960 (1158)
178 1qks_A Cytochrome CD1 nitrite 68.7 43 0.0015 26.7 13.5 56 51-107 217-282 (567)
179 1xi4_A Clathrin heavy chain; a 68.4 6.6 0.00023 36.0 5.0 61 30-98 72-133 (1630)
180 3e5z_A Putative gluconolactona 66.5 29 0.00098 23.9 7.5 46 52-98 237-285 (296)
181 3hfq_A Uncharacterized protein 66.2 31 0.0011 24.2 9.7 50 27-82 289-343 (347)
182 1k32_A Tricorn protease; prote 65.4 60 0.0021 27.2 12.9 69 24-99 379-461 (1045)
183 3dr2_A Exported gluconolactona 64.6 33 0.0011 23.9 8.0 45 52-97 258-304 (305)
184 2ece_A 462AA long hypothetical 64.5 25 0.00086 28.0 7.3 57 50-107 162-244 (462)
185 2j04_B YDR362CP, TAU91; beta p 64.0 22 0.00075 27.9 6.9 50 50-99 181-244 (524)
186 1hym_B CMTI-V, hydrolyzed cucu 62.9 7.4 0.00025 18.9 2.5 15 49-63 2-16 (26)
187 1z68_A Fibroblast activation p 60.6 15 0.0005 29.0 5.3 73 26-98 62-138 (719)
188 1k32_A Tricorn protease; prote 58.2 44 0.0015 28.0 8.1 73 24-99 557-637 (1045)
189 3scy_A Hypothetical bacterial 56.4 49 0.0017 23.3 14.9 68 25-98 212-290 (361)
190 4asc_A Kelch repeat and BTB do 56.2 36 0.0012 24.0 6.4 31 33-72 2-32 (315)
191 3ii7_A Kelch-like protein 7; p 53.9 53 0.0018 22.8 7.3 28 36-65 56-83 (306)
192 2iwa_A Glutamine cyclotransfer 52.4 64 0.0022 23.3 13.4 57 50-107 84-142 (266)
193 2xn4_A Kelch-like protein 2; s 51.2 43 0.0015 23.3 6.1 30 35-65 61-90 (302)
194 3chb_D Cholera toxin; toxin/re 50.7 13 0.00045 23.2 2.8 20 52-71 84-103 (104)
195 1xfd_A DIP, dipeptidyl aminope 49.6 31 0.001 27.0 5.5 48 52-99 37-100 (723)
196 3q6k_A 43.2 kDa salivary prote 49.0 17 0.00058 28.0 3.8 50 50-99 121-190 (381)
197 4asc_A Kelch repeat and BTB do 48.3 52 0.0018 23.1 6.2 28 37-64 150-177 (315)
198 3kvp_A Uncharacterized protein 47.0 39 0.0013 20.1 4.4 22 77-98 25-46 (72)
199 2ghs_A AGR_C_1268P; regucalcin 46.0 77 0.0026 22.4 8.2 46 52-98 71-117 (326)
200 3fvz_A Peptidyl-glycine alpha- 45.4 77 0.0026 22.3 8.8 56 51-107 217-284 (329)
201 1mix_A Talin; focal adhesion, 45.4 55 0.0019 22.0 5.7 41 50-91 139-179 (206)
202 2vpj_A Kelch-like protein 12; 45.3 52 0.0018 22.7 5.7 27 36-63 63-89 (301)
203 2woz_A Kelch repeat and BTB do 44.5 58 0.002 22.9 5.9 63 36-98 159-230 (318)
204 1flg_A Protein (quinoprotein e 44.3 75 0.0026 25.2 7.1 26 51-76 506-531 (582)
205 1z68_A Fibroblast activation p 44.1 36 0.0012 26.8 5.1 48 52-99 36-99 (719)
206 3o4h_A Acylamino-acid-releasin 44.0 69 0.0023 24.5 6.6 59 24-89 22-82 (582)
207 1ltr_D ETB-R2, heat-labIle ent 42.4 21 0.00072 22.6 2.8 20 52-71 83-102 (113)
208 2ece_A 462AA long hypothetical 42.0 92 0.0032 24.7 7.1 48 51-98 227-288 (462)
209 3g4e_A Regucalcin; six bladed 41.6 78 0.0027 21.9 6.2 38 52-89 220-261 (297)
210 3amr_A 3-phytase; beta-propell 41.5 75 0.0026 24.3 6.4 45 52-98 50-107 (355)
211 2xn4_A Kelch-like protein 2; s 41.4 75 0.0026 21.9 6.1 29 36-65 205-233 (302)
212 2vpj_A Kelch-like protein 12; 41.3 85 0.0029 21.6 7.6 62 36-98 113-183 (301)
213 1b44_D ETB-POL, protein (B-POL 40.8 22 0.00077 22.9 2.8 20 52-71 83-102 (129)
214 3hx6_A Type 4 fimbrial biogene 39.6 93 0.0032 25.5 6.9 41 32-72 203-243 (570)
215 3f7f_A Nucleoporin NUP120; nuc 39.5 65 0.0022 27.2 6.1 41 25-72 221-261 (729)
216 2gop_A Trilobed protease; beta 37.5 1E+02 0.0034 21.3 10.3 60 26-88 61-122 (347)
217 2z3z_A Dipeptidyl aminopeptida 37.3 1.4E+02 0.0049 23.1 11.6 71 23-97 400-474 (706)
218 2hbp_A Cytoskeleton assembly c 36.8 47 0.0016 19.7 3.6 20 51-70 2-21 (68)
219 3scy_A Hypothetical bacterial 35.9 1.1E+02 0.0038 21.4 12.9 94 2-98 26-128 (361)
220 1zgk_A Kelch-like ECH-associat 35.5 81 0.0028 22.0 5.5 27 37-65 26-52 (308)
221 3uv9_A TRIM5alpha, tripartite 34.5 38 0.0013 23.2 3.4 29 80-108 127-158 (186)
222 2woz_A Kelch repeat and BTB do 34.4 58 0.002 22.9 4.6 30 36-65 110-140 (318)
223 1zgk_A Kelch-like ECH-associat 33.7 95 0.0032 21.6 5.6 63 35-98 168-239 (308)
224 2dg1_A DRP35, lactonase; beta 32.6 1.2E+02 0.0041 20.8 7.0 47 52-98 66-120 (333)
225 1kb0_A Quinohemoprotein alcoho 32.5 1.2E+02 0.0042 24.3 6.7 30 50-79 496-525 (677)
226 4f7g_A Talin-1; alpha-helix bu 31.2 1.3E+02 0.0043 20.6 6.1 41 50-91 150-190 (222)
227 4a5s_A Dipeptidyl peptidase 4 31.2 50 0.0017 26.4 4.1 47 52-98 92-140 (740)
228 1jof_A Carboxy-CIS,CIS-muconat 30.3 1.5E+02 0.005 21.1 15.1 68 25-98 146-223 (365)
229 2hz6_A Endoplasmic reticulum t 27.5 76 0.0026 23.2 4.3 46 52-98 19-67 (369)
230 1h4r_A Merlin; FERM, neurofibr 27.5 1.6E+02 0.0054 21.2 6.0 47 51-98 239-289 (314)
231 1mit_A RCMTI-V, trypsin inhibi 27.4 72 0.0024 18.4 3.3 24 41-64 39-62 (69)
232 2gop_A Trilobed protease; beta 27.1 1.5E+02 0.0053 20.3 11.9 62 26-88 106-187 (347)
233 1pjx_A Dfpase, DIISOPROPYLFLUO 27.1 1.5E+02 0.005 20.0 12.3 48 51-98 246-298 (314)
234 3rdy_A BWI-1=protease inhibito 26.6 81 0.0028 18.9 3.6 25 40-64 48-72 (79)
235 3hfq_A Uncharacterized protein 26.6 1.6E+02 0.0055 20.3 13.6 67 26-98 242-316 (347)
236 3pe7_A Oligogalacturonate lyas 26.4 1.7E+02 0.0057 20.4 7.9 48 51-98 167-224 (388)
237 1kb0_A Quinohemoprotein alcoho 26.2 2.5E+02 0.0087 22.5 8.5 55 52-107 457-514 (677)
238 1vbw_A Trypsin inhibitor BGIT; 24.7 85 0.0029 18.0 3.3 23 41-63 38-60 (68)
239 4gq2_M Nucleoporin NUP120; bet 24.6 2E+02 0.0069 24.4 6.8 36 30-72 242-277 (950)
240 1fwx_A Nitrous oxide reductase 23.4 1.4E+02 0.0048 24.4 5.4 47 52-98 254-307 (595)
241 4fhn_B Nucleoporin NUP120; pro 23.3 1.3E+02 0.0045 25.9 5.5 23 51-73 258-280 (1139)
242 2nwa_A Hypothetical protein YT 23.2 23 0.00078 22.1 0.6 10 2-11 29-38 (88)
243 3pp4_P B-lymphocyte antigen CD 22.7 13 0.00043 17.9 -0.5 7 7-13 2-8 (25)
244 1w6s_A Methanol dehydrogenase 22.5 2.7E+02 0.0093 22.2 7.0 26 51-76 493-518 (599)
245 1n0e_A Protein MRAZ; cell divi 21.3 53 0.0018 22.5 2.2 17 37-60 127-143 (166)
246 1rwi_B Serine/threonine-protei 20.7 1.9E+02 0.0064 19.0 5.5 47 52-99 171-222 (270)
247 3fvz_A Peptidyl-glycine alpha- 20.5 2.2E+02 0.0076 19.8 9.5 51 49-99 265-322 (329)
No 1
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.54 E-value=1.2e-13 Score=103.93 Aligned_cols=98 Identities=38% Similarity=0.549 Sum_probs=86.9
Q ss_pred CCcceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEec
Q psy3712 1 MEDGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLR 80 (109)
Q Consensus 1 ~~~Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~ 80 (109)
+++|++||+++|......++. ++++.+++++++|++|++|++. +.|+|||..+++.+.+++++++|.++.++
T Consensus 38 ~~~~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d------~~v~iWd~~~~~~~~~~~~~~~v~~v~~~ 109 (355)
T 3vu4_A 38 TLKSFEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVK------EVVHIWDDVKKQDVSRIKVDAPVKDLFLS 109 (355)
T ss_dssp CSSEEEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSST------TEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred cCCEEEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCc------cEEEEEECCCCcEEEEEECCCceEEEEEc
Confidence 367999999999988776653 4799999999999999999874 48999999999999999999999999999
Q ss_pred CCEEEEEeCCeEEEEEcCCCCEEeEE
Q psy3712 81 RDKIVVVLEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 81 r~~lvVvl~~~i~vy~~~~~~~ll~~ 106 (109)
++.++++.+++|++|++.+.++++++
T Consensus 110 ~~~~~~~~~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 110 REFIVVSYGDVISVFKFGNPWKRITD 135 (355)
T ss_dssp SSEEEEEETTEEEEEESSTTCCBSSC
T ss_pred CCEEEEEEcCEEEEEECCCCceeeEE
Confidence 99999999999999999964365544
No 2
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.64 E-value=0.0076 Score=42.78 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=68.8
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.++|+...........-..+++..+..-...+++|..| ....++|||..+.+.+..+...++|..+.++.+
T Consensus 197 i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-------~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 269 (340)
T 4aow_A 197 VKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG-------KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRY 269 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSS
T ss_pred EEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe-------CCCeEEEEEeccCceeeeecCCceEEeeecCCCCc
Confidence 45666665544433222456788888877788876544 246899999999999999999999999999865
Q ss_pred EEEEEeCCeEEEEEcCCCCEEeEE
Q psy3712 83 KIVVVLEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 ~lvVvl~~~i~vy~~~~~~~ll~~ 106 (109)
.++...++.|++|++. +...+.+
T Consensus 270 ~~~~~~d~~i~iwd~~-~~~~~~~ 292 (340)
T 4aow_A 270 WLCAATGPSIKIWDLE-GKIIVDE 292 (340)
T ss_dssp EEEEEETTEEEEEETT-TTEEEEE
T ss_pred eeeccCCCEEEEEECC-CCeEEEe
Confidence 4555667999999998 3454443
No 3
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.61 E-value=0.0073 Score=43.85 Aligned_cols=93 Identities=12% Similarity=0.173 Sum_probs=69.2
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.++|+...........-+.+++..+..-...+++|-.|. ...++|||..+++.+.++.-+.+|.++.++.+
T Consensus 178 i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~ 250 (319)
T 3frx_A 178 VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK-------DGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRY 250 (319)
T ss_dssp EEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET-------TCEEEEEETTTTEEEEEEECCSCEEEEEECSSSS
T ss_pred EEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCC
Confidence 466666655443222123567777777777788876552 46899999999999999999999999999876
Q ss_pred EEEEEeCCeEEEEEcCCCCEEeE
Q psy3712 83 KIVVVLEGLIKVYTFIQCPQQLH 105 (109)
Q Consensus 83 ~lvVvl~~~i~vy~~~~~~~ll~ 105 (109)
.+++...+.+.+|++. +..++.
T Consensus 251 ~la~~~~~~i~v~~~~-~~~~~~ 272 (319)
T 3frx_A 251 WLAAATATGIKVFSLD-PQYLVD 272 (319)
T ss_dssp EEEEEETTEEEEEEET-TEEEEE
T ss_pred EEEEEcCCCcEEEEeC-cCeeee
Confidence 6888888999999997 344443
No 4
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.58 E-value=0.008 Score=42.37 Aligned_cols=89 Identities=11% Similarity=0.107 Sum_probs=67.6
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD- 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~- 82 (109)
..++|+.+.......-....+++..+..-...++++..+. ...+.+||.++++.+.++..+.+|.++.++.+
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~ 236 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-------DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTG 236 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTTEEEEEEECSSCEEEEEECTTS
T ss_pred cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-------CCcEEEEECCCCceEeeecCCCceEEEEECCCC
Confidence 3567777665443322223567888888888888876653 46899999999999999999999999999765
Q ss_pred -EEEEEe-CCeEEEEEcCC
Q psy3712 83 -KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~ 99 (109)
.+++.. +..|++|++.+
T Consensus 237 ~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp SEEEEEETTSCEEEEETTS
T ss_pred CEEEEEcCCCcEEEEECCC
Confidence 566665 47899999984
No 5
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.0074 Score=43.02 Aligned_cols=88 Identities=17% Similarity=0.238 Sum_probs=69.0
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.+||+.+.........-..+++..+..-...+++|..+. ...+.+||..+++.+..+..+.+|..+.++.+
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-------DYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCcEEEEeecCCCeEEEEEccCCC
Confidence 678887766554333334678888888888888877653 36899999999999999999999999999875
Q ss_pred EEEEEeC------CeEEEEEcCC
Q psy3712 83 KIVVVLE------GLIKVYTFIQ 99 (109)
Q Consensus 83 ~lvVvl~------~~i~vy~~~~ 99 (109)
.+++... ..|++|++..
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~ 151 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIER 151 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEE
T ss_pred EEEEecCCccCCCCEEEEEEecC
Confidence 5666666 4999999873
No 6
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.52 E-value=0.0059 Score=45.49 Aligned_cols=92 Identities=13% Similarity=0.228 Sum_probs=65.5
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD- 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~- 82 (109)
-.++|+..............+.+..+..-...+.++.+|+|. ....+.+||..+++.+..+...++|.++.++.+
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs----~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~ 315 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT----MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHS 315 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT----TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSS
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC----CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCC
Confidence 356777765544433222356777777776444444555442 347899999999999999999999999999765
Q ss_pred -EEEEEe---CCeEEEEEcCC
Q psy3712 83 -KIVVVL---EGLIKVYTFIQ 99 (109)
Q Consensus 83 -~lvVvl---~~~i~vy~~~~ 99 (109)
.++++. ++.|+||++.+
T Consensus 316 ~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 316 KEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SEEEEEECTTTCEEEEEEEET
T ss_pred CeEEEEeecCCCcEEEEecCC
Confidence 455554 78999999984
No 7
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.43 E-value=0.0051 Score=49.37 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=71.8
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD- 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~- 82 (109)
-.+||+...........-+.+.+..+..-...+++|..|. ...|+|||..+++.+.++...+.|.++.++.+
T Consensus 542 ~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~-------Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK-------DGVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 614 (694)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSBCEEEETTTTEEEECCBCSSCEEEEEECSSS
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC-------CCeEEEEECCCCceEEEecCCCcEEEEEEcCCC
Confidence 3577777655443322224678888888888888876553 36799999999999999999999999999875
Q ss_pred -EEEEEeCCeEEEEEcCCCCEEeEE
Q psy3712 83 -KIVVVLEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 -~lvVvl~~~i~vy~~~~~~~ll~~ 106 (109)
.++...++.|+||++. +.+.+++
T Consensus 615 ~~l~~~~~~~i~iwd~~-~~~~~~~ 638 (694)
T 3dm0_A 615 YWLCAATEHGIKIWDLE-SKSIVED 638 (694)
T ss_dssp SEEEEEETTEEEEEETT-TTEEEEE
T ss_pred cEEEEEcCCCEEEEECC-CCCChhh
Confidence 5677778999999998 4566554
No 8
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0065 Score=42.52 Aligned_cols=88 Identities=11% Similarity=0.151 Sum_probs=63.8
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC-ceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA-PVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s-~V~~V~l~r~ 82 (109)
-.++|+..............+++.-+..-... .++..| ..+.+.+||..+++.+..+..+. +|.++.++.+
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-------~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCG-------EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEE-------TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred eEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEe-------cCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 36778877665543333346677777776665 344333 34789999999999999998877 8999999877
Q ss_pred --EEEEEeCCeEEEEEcCC
Q psy3712 83 --KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 83 --~lvVvl~~~i~vy~~~~ 99 (109)
.++...+..|++|++.+
T Consensus 278 ~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 278 GDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp SCEEEEETTSCEEEEESCG
T ss_pred CCEEEEeCCCcEEEEeCCC
Confidence 55555567999999984
No 9
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.39 E-value=0.015 Score=41.30 Aligned_cols=95 Identities=13% Similarity=0.171 Sum_probs=69.3
Q ss_pred ceEEEeecCCceeee--eecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEe--
Q psy3712 4 GFRIYNCDPLKEKER--QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRL-- 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~--~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l-- 79 (109)
-.+||+.+....... ..-..+++..+......+++|..+. ...+.+||..+++.+.......+|..+.+
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-------DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIK 137 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTTEEEEEEECSSCEEEEEEEE
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-------CCcEEEEEcCCCCceeeccccCceEEEEEEe
Confidence 368888876333221 1224778999999888888886553 36899999999999988889999999998
Q ss_pred cCC--EEEEEe-CCeEEEEEcCCCCEEeEE
Q psy3712 80 RRD--KIVVVL-EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 80 ~r~--~lvVvl-~~~i~vy~~~~~~~ll~~ 106 (109)
+.+ .++... +..|++|++.. .+.+.+
T Consensus 138 ~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~ 166 (368)
T 3mmy_A 138 APNYSCVMTGSWDKTLKFWDTRS-SNPMMV 166 (368)
T ss_dssp CSSCEEEEEEETTSEEEEECSSC-SSCSEE
T ss_pred CCCCCEEEEccCCCcEEEEECCC-CcEEEE
Confidence 554 355544 47899999973 454443
No 10
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.37 E-value=0.012 Score=44.14 Aligned_cols=94 Identities=14% Similarity=0.241 Sum_probs=66.1
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE----ccCceeEEEe
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE----FNAPVKGVRL 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~----f~s~V~~V~l 79 (109)
-.++|+..............+.+..+.. ..++++..+ ....+.+||..+++.+.++. ..++|.++..
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGN-------ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEE-------TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEe-------CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE
Confidence 4577777665554332222344444443 456665544 23679999999999999988 4678999999
Q ss_pred cCCEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 80 RRDKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 80 ~r~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+.+.++.... ..|++|++. +.+.+.++
T Consensus 371 ~~~~l~s~~~dg~v~iwd~~-~~~~~~~~ 398 (445)
T 2ovr_B 371 NKNFVITSSDDGTVKLWDLK-TGEFIRNL 398 (445)
T ss_dssp CSSEEEEEETTSEEEEEETT-TCCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECC-CCceeeee
Confidence 9999998885 689999998 46777655
No 11
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.36 E-value=0.019 Score=41.82 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=70.6
Q ss_pred cceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC
Q psy3712 3 DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD 82 (109)
Q Consensus 3 ~Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~ 82 (109)
...++|+.+..+...... ..+++..+..-...+.+++.|+. .+.|.+||..+++.+.++..+..|.++.++++
T Consensus 12 ~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spd 84 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNNVIATVPAGSSPQGVAVSPD 84 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred CEEEEEECCCCeEEEEee-cCCCcceEEECCCCCEEEEECCC------CCeEEEEECCCCeEEEEEECCCCccceEECCC
Confidence 346788877665543322 24467777777777877676643 36899999999999999999999999999854
Q ss_pred --EEEEEe--CCeEEEEEcCCCCEEeEE
Q psy3712 83 --KIVVVL--EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 --~lvVvl--~~~i~vy~~~~~~~ll~~ 106 (109)
+++++- ++.|++|+... .+.+..
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~-~~~~~~ 111 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTS-NTVAGT 111 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTT-TEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCC-CeEEEE
Confidence 566665 37999999984 565544
No 12
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.36 E-value=0.015 Score=42.39 Aligned_cols=99 Identities=8% Similarity=0.125 Sum_probs=70.3
Q ss_pred ceEEEeecCCceeeeeec---C---CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE--------
Q psy3712 4 GFRIYNCDPLKEKERQDF---T---DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-------- 69 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~---~---~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-------- 69 (109)
-.++|+............ . .+++..+..-...+++|..+... ....+.+||..+++.+.++.
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----SFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET----TEEEEEEEETTTCCEEEEECBC------
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC----CCceEEEEECCCCcccceeccCcccccc
Confidence 367777766554433332 3 66788888888888887655210 11589999999999999887
Q ss_pred ------ccCceeEEEecCC--EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 70 ------FNAPVKGVRLRRD--KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 70 ------f~s~V~~V~l~r~--~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
...+|.++.++.+ .|+..- +..|++|++. +.+.+.++
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~ 329 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK-TKERITTL 329 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC-CCceeEEE
Confidence 4678999999844 566655 4689999998 46777665
No 13
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.35 E-value=0.019 Score=42.71 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=70.3
Q ss_pred cceEEEeecCCceeeee----ec-----CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCc
Q psy3712 3 DGFRIYNCDPLKEKERQ----DF-----TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP 73 (109)
Q Consensus 3 ~Gf~Iy~~~P~~~~~~~----~~-----~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~ 73 (109)
.-.|+|+.++....... .. .+..+..|..=.+.+++|+.+++ ..+.++|||.++++.+.+++-..+
T Consensus 104 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~ 178 (365)
T 4h5i_A 104 KHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGE 178 (365)
T ss_dssp CCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSC
T ss_pred CcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCc
Confidence 34688887765543221 11 12346667776777888776654 247899999999999999999999
Q ss_pred eeEEEecCC--EEEEEeCCeEEEEEcCCCCE
Q psy3712 74 VKGVRLRRD--KIVVVLEGLIKVYTFIQCPQ 102 (109)
Q Consensus 74 V~~V~l~r~--~lvVvl~~~i~vy~~~~~~~ 102 (109)
|.+|.++.+ +++.+.++.+.+++..+...
T Consensus 179 V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp CCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred eEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 999999876 78888899999999875433
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.35 E-value=0.016 Score=41.65 Aligned_cols=95 Identities=9% Similarity=0.146 Sum_probs=68.9
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~ 82 (109)
-.++|+.+...+........+++..+....+.+++|..+. ...+++||..+++.+.++.- +.+|.++.++.+
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-------d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 108 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT 108 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred cEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC-------CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCC
Confidence 3678887766554333334678888888888898876542 47899999999999988875 457999999866
Q ss_pred --EEEEEeC-CeEEEEEcCCCCEEeE
Q psy3712 83 --KIVVVLE-GLIKVYTFIQCPQQLH 105 (109)
Q Consensus 83 --~lvVvl~-~~i~vy~~~~~~~ll~ 105 (109)
.++..-. ..|.+|++.+...+..
T Consensus 109 ~~~l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 109 KPYVLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp SSEEEEEETTSCEEEEEGGGTTEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcchhh
Confidence 4555544 6899999985434433
No 15
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.35 E-value=0.012 Score=45.20 Aligned_cols=96 Identities=13% Similarity=0.203 Sum_probs=70.0
Q ss_pred ceEEEeecCCceeeeeecCCC---CEEEEEEcCC-ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE-----EccCce
Q psy3712 4 GFRIYNCDPLKEKERQDFTDG---GLGHVEMLFR-CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL-----EFNAPV 74 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g---~v~~veml~~-tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el-----~f~s~V 74 (109)
-.++|+..+........-..+ .+..+..-.. .+++|..+. ...+.+||..+++.+.++ ....+|
T Consensus 184 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v 256 (615)
T 1pgu_A 184 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-------DRKISCFDGKSGEFLKYIEDDQEPVQGGI 256 (615)
T ss_dssp EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-------TCCEEEEETTTCCEEEECCBTTBCCCSCE
T ss_pred cEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-------CCeEEEEECCCCCEeEEecccccccCCce
Confidence 357777776655433222344 6888888887 788876653 357999999999999998 678899
Q ss_pred eEEEec-CCEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 75 KGVRLR-RDKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 75 ~~V~l~-r~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
.++.++ .+.++..-. ..|.+|++. +.+.+.++
T Consensus 257 ~~~~~~~~~~l~~~~~d~~i~~wd~~-~~~~~~~~ 290 (615)
T 1pgu_A 257 FALSWLDSQKFATVGADATIRVWDVT-TSKCVQKW 290 (615)
T ss_dssp EEEEESSSSEEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCcEEEEECC-CCcEEEEE
Confidence 999994 556666664 589999998 46666654
No 16
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.31 E-value=0.012 Score=41.33 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=64.9
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++++........... ...++..+......+.++..+|. ..+.++|||..+++.+.+++- .++|.++.++++
T Consensus 223 i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~-----~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 223 IRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGF-----AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp EEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECT-----TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEeccccccccccc-ceeeeeeeeecccccceEEEEEc-----CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 4566665554433322 35677778888888888777654 347899999999999999875 568999999865
Q ss_pred -EEEEEe-CCeEEEEEcCC
Q psy3712 83 -KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~ 99 (109)
+|+-+- +..|+||++.+
T Consensus 297 ~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFE 315 (318)
T ss_dssp SCEEEEETTTEEEEECCSC
T ss_pred CEEEEEecCCeEEEEECCC
Confidence 555544 46899999873
No 17
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.28 E-value=0.018 Score=43.19 Aligned_cols=79 Identities=13% Similarity=0.275 Sum_probs=61.1
Q ss_pred CCCEEEEEEc-CCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC--CEEEEEe---CCeEEEEE
Q psy3712 23 DGGLGHVEML-FRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR--DKIVVVL---EGLIKVYT 96 (109)
Q Consensus 23 ~g~v~~veml-~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r--~~lvVvl---~~~i~vy~ 96 (109)
.+.+..+... ...+++|..||+ ..+.++|||..+++....+.....|.++.... +.++++. ++.|+||+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs-----~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd 350 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGT-----SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWK 350 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECT-----TTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEE
T ss_pred CCceeeeeeCCCcccEEEEEeec-----CCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEE
Confidence 4566666665 466777776654 34789999999999999999999999988765 4666664 57899999
Q ss_pred cCCCCEEeEEe
Q psy3712 97 FIQCPQQLHIY 107 (109)
Q Consensus 97 ~~~~~~ll~~~ 107 (109)
+. +.++++++
T Consensus 351 ~~-~~~~v~~l 360 (420)
T 4gga_A 351 YP-TMAKVAEL 360 (420)
T ss_dssp TT-TCCEEEEE
T ss_pred CC-CCcEEEEE
Confidence 98 57888765
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.27 E-value=0.02 Score=42.92 Aligned_cols=94 Identities=13% Similarity=0.056 Sum_probs=69.3
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~ 82 (109)
-.++|+...........-..+++..+..-...+.+|..+. .+.+.+||..+++.+.++.- ..+|..+.++.+
T Consensus 291 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 363 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM-------DTTIRIWDLENGELMYTLQGHTALVGLLRLSDK 363 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCEEEEEECSS
T ss_pred eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-------CCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCC
Confidence 3577777665554332223567888888888888865543 36799999999999988864 568999999999
Q ss_pred EEEEEeC-CeEEEEEcCCCCEEeE
Q psy3712 83 KIVVVLE-GLIKVYTFIQCPQQLH 105 (109)
Q Consensus 83 ~lvVvl~-~~i~vy~~~~~~~ll~ 105 (109)
+++..-. ..|++|++.+ .+...
T Consensus 364 ~l~s~s~dg~v~vwd~~~-~~~~~ 386 (464)
T 3v7d_B 364 FLVSAAADGSIRGWDAND-YSRKF 386 (464)
T ss_dssp EEEEEETTSEEEEEETTT-CCEEE
T ss_pred EEEEEeCCCcEEEEECCC-Cceee
Confidence 9988776 5899999985 44443
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.27 E-value=0.018 Score=41.98 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=66.5
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++|+.+........+.....+..+..-...+++|..+. ...+.|||..+++.+.+++- ..+|.++.++++
T Consensus 146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI-------DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 218 (321)
T ss_dssp EEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS
T ss_pred EEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC-------CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC
Confidence 566776665554433333456777777777888876542 36799999999999888874 458999999876
Q ss_pred -EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 83 -KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 -~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
.|+..-. ..|++|++. ..+.+.++
T Consensus 219 ~~l~s~s~dg~i~iwd~~-~~~~~~~~ 244 (321)
T 3ow8_A 219 QLLVTASDDGYIKIYDVQ-HANLAGTL 244 (321)
T ss_dssp CEEEEECTTSCEEEEETT-TCCEEEEE
T ss_pred CEEEEEcCCCeEEEEECC-CcceeEEE
Confidence 5555554 579999998 45655543
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.23 E-value=0.017 Score=43.31 Aligned_cols=90 Identities=13% Similarity=0.164 Sum_probs=61.1
Q ss_pred ceEEEeecCCceeeeeec---CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE------EccCce
Q psy3712 4 GFRIYNCDPLKEKERQDF---TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL------EFNAPV 74 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~---~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el------~f~s~V 74 (109)
-.++|+............ ..+.+..+.. ..+++|..| ....|.|||..+++.+.++ ...++|
T Consensus 340 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v 410 (445)
T 2ovr_B 340 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSS-------DDGTVKLWDLKTGEFIRNLVTLESGGSGGVV 410 (445)
T ss_dssp CEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEE-------TTSEEEEEETTTCCEEEEEEECTTGGGTCEE
T ss_pred eEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEe-------CCCeEEEEECCCCceeeeeeccccCCCCceE
Confidence 367888766554332211 2344544444 567766554 2468999999999999988 345689
Q ss_pred eEEEecCCEEEEEeC-------CeEEEEEcCCCCE
Q psy3712 75 KGVRLRRDKIVVVLE-------GLIKVYTFIQCPQ 102 (109)
Q Consensus 75 ~~V~l~r~~lvVvl~-------~~i~vy~~~~~~~ 102 (109)
.++.++.+..+++.. .+++||+|...|+
T Consensus 411 ~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~~ 445 (445)
T 2ovr_B 411 WRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDMK 445 (445)
T ss_dssp EEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC-
T ss_pred EEEEecCCEEEEEEcccCCCCccEEEEEECCCCCC
Confidence 999999997776652 2499999997664
No 21
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.003 Score=46.13 Aligned_cols=89 Identities=11% Similarity=0.098 Sum_probs=64.3
Q ss_pred ceEEEeecCCceeeeee-cCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEE-EEEEc--cCceeEEEe
Q psy3712 4 GFRIYNCDPLKEKERQD-FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVV-ICLEF--NAPVKGVRL 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~-~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i-~el~f--~s~V~~V~l 79 (109)
-.++|+.+......... ...+++..+..-...+++|.-+ ....|+|||.++++.+ ..++- .++|.++.+
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~-------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~f 222 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS-------PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKF 222 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC-------TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc-------CCCEEEEEECCCCCCCccEEeccCCCCEEEEEE
Confidence 35777776655532221 1234677777777777776543 3468999999999877 66766 789999999
Q ss_pred cCC--EEEEEeCCeEEEEEcCC
Q psy3712 80 RRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 80 ~r~--~lvVvl~~~i~vy~~~~ 99 (109)
+.+ .|+..-++.|++|++.+
T Consensus 223 s~~g~~l~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 223 ADNGYWMVVECDQTVVCFDLRK 244 (343)
T ss_dssp CTTSSEEEEEESSBEEEEETTS
T ss_pred eCCCCEEEEEeCCeEEEEEcCC
Confidence 876 78888899999999984
No 22
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.02 Score=40.69 Aligned_cols=94 Identities=12% Similarity=0.142 Sum_probs=68.5
Q ss_pred eEEEeecC-CceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-
Q psy3712 5 FRIYNCDP-LKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P-~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~- 82 (109)
.++|+... ...........+++..+..-...+++|..+. .+.+.+||..+++.+..+..+.++..+.++.+
T Consensus 199 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (369)
T 3zwl_B 199 ISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR-------DTNSFLVDVSTLQVLKKYETDCPLNTAVITPLK 271 (369)
T ss_dssp EEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCEEEEEECSSCEEEEEECSSS
T ss_pred EEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC-------CceEEEEECCCCceeeeecCCCCceeEEecCCC
Confidence 56777765 3333333334678888888888888876653 36899999999999999999999999999865
Q ss_pred -EEEEEeCC---------------eEEEEEcCCCCEEeEE
Q psy3712 83 -KIVVVLEG---------------LIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 -~lvVvl~~---------------~i~vy~~~~~~~ll~~ 106 (109)
.+++...+ .+.+|+.. +.+.+.+
T Consensus 272 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~ 310 (369)
T 3zwl_B 272 EFIILGGGQEAKDVTTTSANEGKFEARFYHKI-FEEEIGR 310 (369)
T ss_dssp SEEEEEECCC-------------CEEEEEETT-TCCEEEE
T ss_pred ceEEEeecCCCceEEEEecCCCcceeEEEecC-CCcchhh
Confidence 45554443 79999987 3555554
No 23
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.22 E-value=0.018 Score=41.92 Aligned_cols=89 Identities=12% Similarity=0.160 Sum_probs=66.0
Q ss_pred ceEEEeecCCceeeeeec-------------CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-
Q psy3712 4 GFRIYNCDPLKEKERQDF-------------TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE- 69 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~-------------~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~- 69 (109)
-.++|+............ ..+.+..+..-...+++|..+. .+.+.|||..+++.+.++.
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~ 331 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-------DGKLRFWDVKTKERITTLNM 331 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-------TSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-------CCeEEEEEcCCCceeEEEec
Confidence 467777765554333222 3567888888888888876653 4689999999999999998
Q ss_pred ------c---------------cCceeEEEecCC------------EEEEEe-CCeEEEEEcCC
Q psy3712 70 ------F---------------NAPVKGVRLRRD------------KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 70 ------f---------------~s~V~~V~l~r~------------~lvVvl-~~~i~vy~~~~ 99 (109)
. ..+|.++.++.+ .++..- +..|++|++.+
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 3 688999999998 455444 57999999863
No 24
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.20 E-value=0.015 Score=42.70 Aligned_cols=96 Identities=10% Similarity=0.165 Sum_probs=69.0
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~ 82 (109)
-.+||+.+.........-+.+.+..+..-...+++|..+. ...++|||..+++.+.++. ...+|.++.++.+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 192 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ-------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR 192 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETT
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC-------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC
Confidence 3677776654443221224678888888888888876553 3689999999998888887 4678999999865
Q ss_pred --EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 83 --KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 --~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
.++..-. ..|.+|++. +.+.+.++
T Consensus 193 ~~~l~s~~~d~~v~iwd~~-~~~~~~~~ 219 (420)
T 3vl1_A 193 GRNVLSASLDGTIRLWECG-TGTTIHTF 219 (420)
T ss_dssp TTEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred CCEEEEEcCCCcEEEeECC-CCceeEEe
Confidence 5666555 679999998 46766654
No 25
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.025 Score=42.08 Aligned_cols=96 Identities=16% Similarity=0.238 Sum_probs=66.4
Q ss_pred ceEEEeecCCceeeeeec--CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc--cCceeEEEe
Q psy3712 4 GFRIYNCDPLKEKERQDF--TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF--NAPVKGVRL 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~--~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f--~s~V~~V~l 79 (109)
-.++|+.........-.. ..+.+..+..-...+++|..+. ...++|||.++++.+.++.+ ..+|.++.+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-------RGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-------TSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-------CCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 356777766555433222 3567888888777777765543 36799999999999998876 457999966
Q ss_pred cCC------EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 80 RRD------KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 80 ~r~------~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
... .++.... ..|++|++. +.+.+.++
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 299 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFV-KGHCQYAF 299 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETT-TTEEEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcC-CCcEEEEE
Confidence 643 5555555 459999998 46766654
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.17 E-value=0.032 Score=39.63 Aligned_cols=95 Identities=20% Similarity=0.228 Sum_probs=67.5
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++|+.+.......-.-..+.+..+..-...+++|..+. ...+++||.++++.+..+.. ..+|..+.++++
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF-------DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 161 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-------CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCC
Confidence 577777665543332223567888888888888876553 35799999999998888765 458999999865
Q ss_pred -EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 83 -KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.++... +..|++|++.+ .+.+.++
T Consensus 162 ~~l~~~~~d~~i~~wd~~~-~~~~~~~ 187 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTAS-GQCLKTL 187 (312)
T ss_dssp SEEEEEETTSCEEEEETTT-CCEEEEE
T ss_pred CEEEEEeCCCcEEEEECCC-CceeeEE
Confidence 455554 47899999984 5555543
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.15 E-value=0.035 Score=40.48 Aligned_cols=95 Identities=5% Similarity=0.087 Sum_probs=66.3
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~ 82 (109)
-.++|+.+.........-+.+.+..+..-...+++|-.+. .+.+++||..+++.+..+.- ..+|.++.++++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~-------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~ 237 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC-------DASAKLWDVREGMCRQTFTGHESDINAICFFPN 237 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC-------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC
Confidence 3567776665544322223567888888888887765442 36799999999998887764 567999999864
Q ss_pred --EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 83 --KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 --~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
.++..-. ..|++|++.. .+.+.+
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~-~~~~~~ 263 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRA-DQELMT 263 (340)
T ss_dssp SSEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCC-CcEEEE
Confidence 5666554 6899999984 555544
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.14 E-value=0.021 Score=41.64 Aligned_cols=95 Identities=14% Similarity=0.090 Sum_probs=66.2
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++|+....+......-..+++..+..-...+++|..+ ....++|||..+++.+.++.- .++|.++.++++
T Consensus 188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS-------DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC-------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc-------CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC
Confidence 56777665544322222345677777777777776544 236799999999998888764 457999999865
Q ss_pred -EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 83 -KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 -~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
.|+..-. ..|.||++. +.+.++++
T Consensus 261 ~~l~s~s~D~~v~iwd~~-~~~~~~~~ 286 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVG-TRTCVHTF 286 (321)
T ss_dssp SEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred CEEEEEeCCCcEEEEeCC-CCEEEEEE
Confidence 5555544 689999998 57877775
No 29
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.11 E-value=0.025 Score=40.13 Aligned_cols=90 Identities=10% Similarity=0.140 Sum_probs=68.4
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEE--cCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEM--LFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~vem--l~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~ 82 (109)
.++|+.+......... ..+++..+.. -...++++..+. .+.+.+||..+++.+..+..+..+..+....+
T Consensus 110 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQ-HDAPVKTIHWIKAPNYSCVMTGSW-------DKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEEEECSSCEEEEEEET-------TSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred EEEEEcCCCCceeecc-ccCceEEEEEEeCCCCCEEEEccC-------CCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 6778777665543222 4678888887 555566655542 36899999999999999999999999999998
Q ss_pred EEEEEeC-CeEEEEEcCCCCE
Q psy3712 83 KIVVVLE-GLIKVYTFIQCPQ 102 (109)
Q Consensus 83 ~lvVvl~-~~i~vy~~~~~~~ 102 (109)
.++++.. +.+.+|++.....
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~ 202 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPS 202 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCE
T ss_pred eeEEEeCCCcEEEEEeccccc
Confidence 8888776 7999999985443
No 30
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.11 E-value=0.043 Score=39.95 Aligned_cols=94 Identities=6% Similarity=0.092 Sum_probs=65.8
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC---ceeEEEecC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA---PVKGVRLRR 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s---~V~~V~l~r 81 (109)
.++|+...........-..+.+..+..-...+++|..|. ...++|||.++++.+..+..+. .|..+.+++
T Consensus 208 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD-------DATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC-------CCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 567776655443222223567888888888888876552 3679999999999888776554 689999986
Q ss_pred C--EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 82 D--KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 82 ~--~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
+ .+++... ..|++|+.. +.+.+.+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~-~~~~~~~ 307 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDAL-KADRAGV 307 (340)
T ss_dssp TSSEEEEEETTSEEEEEETT-TCCEEEE
T ss_pred CCCEEEEECCCCeEEEEEcc-cCcEeeE
Confidence 5 5666555 589999997 3555554
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.10 E-value=0.024 Score=40.31 Aligned_cols=88 Identities=14% Similarity=0.110 Sum_probs=65.4
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE----EccCceeEEEe
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL----EFNAPVKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el----~f~s~V~~V~l 79 (109)
.+||+.+.........-..+++..+.... ..+++|..+. ...|.|||..+++.+..+ ....+|..+.+
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-------DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-------TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-------CCeEEEEEeecCeEEEEecccccccCceeEEEE
Confidence 67787776655433222467888888887 7777766653 367999999999998887 46789999999
Q ss_pred cCC--EEEEEeC-CeEEEEEcCC
Q psy3712 80 RRD--KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 80 ~r~--~lvVvl~-~~i~vy~~~~ 99 (109)
+.+ .++.... ..|++|++..
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCCEEEEecCCCCEEEEECCC
Confidence 854 6666654 6899999973
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.10 E-value=0.036 Score=38.93 Aligned_cols=94 Identities=9% Similarity=0.086 Sum_probs=66.4
Q ss_pred eEEEeecCCceeee--eecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecC
Q psy3712 5 FRIYNCDPLKEKER--QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRR 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~--~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r 81 (109)
.++|+.+....... .....+.+..+......++++..+. ...+.+||..+++.+..+.- ..+|.++.++.
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC-------CCcEEEEeCCCCceeeeeecccCceEEEEECC
Confidence 67777766543222 1223567777888888888876553 35799999999998888874 67899999975
Q ss_pred C--EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 82 D--KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 82 ~--~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
+ .+++... ..|++|++. +.+.+..
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~-~~~~~~~ 220 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLR-EGRQLQQ 220 (337)
T ss_dssp TSSEEEEEETTSEEEEEETT-TTEEEEE
T ss_pred CCCEEEEEecCCcEEEEECC-CCceEee
Confidence 5 6776654 699999998 4566554
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.019 Score=41.65 Aligned_cols=96 Identities=11% Similarity=0.194 Sum_probs=67.7
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~ 82 (109)
..++|+..............+.+..+..-...+++|..+. ...+.+||..+++.+..+. ...+|.++.++.+
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-------DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-------TSCEEEECSSSBSCSEEECCCSSCEEEEEEETT
T ss_pred eEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-------CCEEEEEECCCCccceEecCCCccEEEEEECCC
Confidence 3556666544333222224678888888888888876652 3579999999988887776 5778999999987
Q ss_pred -EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 83 -KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.++... +..|++|++. +.+.+.++
T Consensus 301 ~~l~~~~~d~~i~i~d~~-~~~~~~~~ 326 (425)
T 1r5m_A 301 DKVISCSMDGSVRLWSLK-QNTLLALS 326 (425)
T ss_dssp TEEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred CEEEEEeCCCcEEEEECC-CCcEeEec
Confidence 555544 4799999998 46766554
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.08 E-value=0.032 Score=44.72 Aligned_cols=94 Identities=11% Similarity=0.163 Sum_probs=71.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~- 82 (109)
.+||+.+..........+.+++..+..-.+.+++|..|. ...+.|||..+++.+.++. -+.+|..+.++++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-------CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence 678887776554433335778999999899999987763 3689999999999999888 4668999999876
Q ss_pred -EEEEEeC-CeEEEEEcCCCCEEeE
Q psy3712 83 -KIVVVLE-GLIKVYTFIQCPQQLH 105 (109)
Q Consensus 83 -~lvVvl~-~~i~vy~~~~~~~ll~ 105 (109)
.++.... ..|.+|++........
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCceEEE
Confidence 5776666 5899999985434443
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.011 Score=42.93 Aligned_cols=88 Identities=10% Similarity=-0.043 Sum_probs=66.0
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCc--------------------
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-------------------- 63 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~-------------------- 63 (109)
-.++|+..............+++..+..-...+++|..+. .+.+.|||..+++
T Consensus 311 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (425)
T 1r5m_A 311 SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM-------DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIP 383 (425)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET-------TSCEEEEECHHHHC--------------CEECC
T ss_pred cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC-------CCeEEEEECCCCccceeeeecccccccCcccch
Confidence 4677777666554433334678888888888888877653 3679999999888
Q ss_pred EEEEEEcc--C-ceeEEEecCC--EEEEEeC-CeEEEEEcC
Q psy3712 64 VVICLEFN--A-PVKGVRLRRD--KIVVVLE-GLIKVYTFI 98 (109)
Q Consensus 64 ~i~el~f~--s-~V~~V~l~r~--~lvVvl~-~~i~vy~~~ 98 (109)
.+..+.-. . +|.++.++.+ +|++... ..|++|+++
T Consensus 384 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 384 LYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 78888776 5 8999999866 6766665 579999986
No 36
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.06 E-value=0.042 Score=39.05 Aligned_cols=96 Identities=13% Similarity=0.295 Sum_probs=66.0
Q ss_pred ceEEEeecCCceeee-eec----CCCCEEEEEEcCCc----cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCc
Q psy3712 4 GFRIYNCDPLKEKER-QDF----TDGGLGHVEMLFRC----NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAP 73 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~-~~~----~~g~v~~veml~~t----n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~ 73 (109)
..+||+.+....... ... ..+++..+..-... +++|..+. ...+.|||..+++.+.++. ...+
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-------dg~i~v~d~~~~~~~~~~~~~~~~ 117 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS-------RGIIRIINPITMQCIKHYVGHGNA 117 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET-------TCEEEEECTTTCCEEEEEESCCSC
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC-------CCEEEEEEchhceEeeeecCCCCc
Confidence 467888775443211 111 23567777776653 46655442 3689999999999999988 6778
Q ss_pred eeEEEecC---CEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 74 VKGVRLRR---DKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 74 V~~V~l~r---~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
|.++.++. +.++.... ..|++|++. +.+.+..+
T Consensus 118 i~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 154 (366)
T 3k26_A 118 INELKFHPRDPNLLLSVSKDHALRLWNIQ-TDTLVAIF 154 (366)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEEee-cCeEEEEe
Confidence 99999976 56666664 689999998 45666554
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.01 E-value=0.061 Score=40.02 Aligned_cols=93 Identities=16% Similarity=0.163 Sum_probs=66.1
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC---
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR--- 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r--- 81 (109)
.+||+.+.......-.-+.+.+.-+......+.+|..+. ...++|||..+++....+.....|..+.++.
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-------DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-------CCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC
Confidence 567777655443222223567877888777787765442 3789999999999999999999999999975
Q ss_pred CEEEEEe-CCeEEEEEcCCCCEEeE
Q psy3712 82 DKIVVVL-EGLIKVYTFIQCPQQLH 105 (109)
Q Consensus 82 ~~lvVvl-~~~i~vy~~~~~~~ll~ 105 (109)
+.++..- +..|++|+... .+.+.
T Consensus 220 ~~l~~~s~d~~v~iwd~~~-~~~~~ 243 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSET-GFLVE 243 (393)
T ss_dssp CEEEEEETTSCEEEEETTT-CCEEE
T ss_pred CEEEEEcCCCcEEEEECCC-CcEEE
Confidence 3555544 47899999873 44443
No 38
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.99 E-value=0.061 Score=39.68 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=64.1
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.++|+....+...... ..+.+..+..-...+.+++.+++ .+.+.+||..+++.+..+.....+.++.++.+
T Consensus 285 i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 285 LGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMC------CSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGK 357 (433)
T ss_dssp EEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETT------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSS
T ss_pred EEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecC------CCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCC
Confidence 4456554443322111 12344445555555566666543 46899999999999999999999999999965
Q ss_pred EEEEEeCC----------------eEEEEEcCCCCEEeEEe
Q psy3712 83 KIVVVLEG----------------LIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 ~lvVvl~~----------------~i~vy~~~~~~~ll~~~ 107 (109)
.+++...+ .|++|+.. +.+.+.++
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~-~~~~~~~~ 397 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT-TDTVKEFW 397 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETT-TTEEEEEE
T ss_pred EEEEEecCCCccccccccccccceEEEEEECC-CCcEEEEe
Confidence 67777764 89999997 46666543
No 39
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.99 E-value=0.044 Score=40.38 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=57.8
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCce-EEEEeCCCCcEEEEEE---ccCceeEEEecCC--EEEEEeC-CeEEE
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNR-VMIWDDLKKQVVICLE---FNAPVKGVRLRRD--KIVVVLE-GLIKV 94 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~-v~IwDd~~~~~i~el~---f~s~V~~V~l~r~--~lvVvl~-~~i~v 94 (109)
+.+++..+..-...+++|-.+. ... ++|||..+++.+.++. .+.+|.++.++.+ +|+..-. ..|+|
T Consensus 194 h~~~v~~~~~s~~g~~l~s~s~-------d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~i 266 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDMVATCSQ-------DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHV 266 (355)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-------TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEE
T ss_pred cCCceEEEEECCCCCEEEEEeC-------CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEE
Confidence 3678888888888888876553 355 9999999999999998 7889999999875 5665555 68999
Q ss_pred EEcCC
Q psy3712 95 YTFIQ 99 (109)
Q Consensus 95 y~~~~ 99 (109)
|++.+
T Consensus 267 w~~~~ 271 (355)
T 3vu4_A 267 FEIFN 271 (355)
T ss_dssp EESSC
T ss_pred EEccC
Confidence 99974
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.99 E-value=0.063 Score=39.79 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=70.9
Q ss_pred cceEEEeecCCceeeeeec-CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEec
Q psy3712 3 DGFRIYNCDPLKEKERQDF-TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLR 80 (109)
Q Consensus 3 ~Gf~Iy~~~P~~~~~~~~~-~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~ 80 (109)
...++|+.+.......... ..+.+..+..-...+++|..+. ...+.|||..+++.+.++. ...+|..+..+
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 185 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG-------NGLVDIYDVESQTKLRTMAGHQARVGCLSWN 185 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC-------CCeEEEEECcCCeEEEEecCCCCceEEEEEC
Confidence 3467888776655433222 3678888888888888877653 3579999999999888875 45689999999
Q ss_pred CCEEEEEeC-CeEEEEEcCCCCEEeE
Q psy3712 81 RDKIVVVLE-GLIKVYTFIQCPQQLH 105 (109)
Q Consensus 81 r~~lvVvl~-~~i~vy~~~~~~~ll~ 105 (109)
.+.++..-. ..|.+|++...-+.+.
T Consensus 186 ~~~l~~~~~dg~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 186 RHVLSSGSRSGAIHHHDVRIANHQIG 211 (401)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEE
T ss_pred CCEEEEEcCCCCEEEEecccCcceee
Confidence 998888876 6899999984333333
No 41
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.97 E-value=0.064 Score=39.60 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=67.4
Q ss_pred eEEEeecCCc-------eeeeeecCCCCEEEEEEcCCc-cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE---ccCc
Q psy3712 5 FRIYNCDPLK-------EKERQDFTDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAP 73 (109)
Q Consensus 5 f~Iy~~~P~~-------~~~~~~~~~g~v~~veml~~t-n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~---f~s~ 73 (109)
.+||+.+... ......-+.+.+..++..... +++|..+. ...+.|||..+++.+..+. .+.+
T Consensus 106 v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~ 178 (402)
T 2aq5_A 106 VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-------DNVILVWDVGTGAAVLTLGPDVHPDT 178 (402)
T ss_dssp EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-------TSCEEEEETTTTEEEEEECTTTCCSC
T ss_pred EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-------CCEEEEEECCCCCccEEEecCCCCCc
Confidence 6788876542 111112246788888888776 67766553 3679999999999988883 5778
Q ss_pred eeEEEecCC--EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 74 VKGVRLRRD--KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 74 V~~V~l~r~--~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
|..+.++.+ .+++.. +..|++|++. +.+.+.++
T Consensus 179 v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~ 214 (402)
T 2aq5_A 179 IYSVDWSRDGALICTSCRDKRVRVIEPR-KGTVVAEK 214 (402)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEeCC-CCceeeee
Confidence 999999754 566655 5789999998 46766654
No 42
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.96 E-value=0.057 Score=39.86 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=67.0
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD- 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~- 82 (109)
..++|+.+..............+..+..-...+.+++.+.. .+.+.+||..+++.+..+.....+.++.++.+
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI------SEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDG 265 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT------TTEEEEEETTTTEEEEECCCCSEEEEEEECTTS
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC------CCcEEEEECCCCcEEEEecCCCCceEEEEcCCC
Confidence 35667766554433222234466666776677777666542 35899999999999998888889999999865
Q ss_pred -EEEEEe---------CCeEEEEEcCCCCEEeEE
Q psy3712 83 -KIVVVL---------EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 -~lvVvl---------~~~i~vy~~~~~~~ll~~ 106 (109)
+++++. +..|++|++. +.+.+..
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~~ 298 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMD-KEKLIDT 298 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETT-TTEEEEE
T ss_pred CEEEEEECCCCccccCCCeEEEEECC-CCcEEee
Confidence 566665 4699999998 3555543
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.95 E-value=0.044 Score=39.99 Aligned_cols=71 Identities=20% Similarity=0.370 Sum_probs=55.5
Q ss_pred CCCCEEEEEEcCCcc-EEEEEcCCCCCCCCCceEEEEeCCC----CcEEEEEEccCceeEEEecC---CEEEEEeC-CeE
Q psy3712 22 TDGGLGHVEMLFRCN-YLALVGGGTHPKYPNNRVMIWDDLK----KQVVICLEFNAPVKGVRLRR---DKIVVVLE-GLI 92 (109)
Q Consensus 22 ~~g~v~~veml~~tn-~ialVg~g~~p~~~~n~v~IwDd~~----~~~i~el~f~s~V~~V~l~r---~~lvVvl~-~~i 92 (109)
..+.+..+..-...+ ++|..+ ....++|||..+ ++.+..+....+|.++.++. +.+++.-. +.|
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSS-------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEE-------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred CCCcEEEEEECCCCCCEEEEEe-------CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 457788888887777 565444 246899999997 77888888899999999987 56666654 799
Q ss_pred EEEEcCC
Q psy3712 93 KVYTFIQ 99 (109)
Q Consensus 93 ~vy~~~~ 99 (109)
++|++.+
T Consensus 276 ~iwd~~~ 282 (383)
T 3ei3_B 276 RVYSSYD 282 (383)
T ss_dssp EEEETTB
T ss_pred EEEECCC
Confidence 9999973
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.92 E-value=0.058 Score=38.27 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=67.3
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~ 82 (109)
-.+||+...........-..+++.-+..-...+++|..+. ...+.+||..+++.+..+.- ..+|..+.++.+
T Consensus 46 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD-------DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC-------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 3567776554443222223567888888888888876653 36899999999998888875 457999998865
Q ss_pred --EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 83 --KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 --~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.++..- +..|++|++.+ .+.+.++
T Consensus 119 ~~~l~s~~~d~~i~iwd~~~-~~~~~~~ 145 (312)
T 4ery_A 119 SNLIVSGSFDESVRIWDVKT-GKCLKTL 145 (312)
T ss_dssp SSEEEEEETTSCEEEEETTT-CCEEEEE
T ss_pred CCEEEEEeCCCcEEEEECCC-CEEEEEe
Confidence 555544 47899999984 5555543
No 45
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.89 E-value=0.081 Score=39.64 Aligned_cols=94 Identities=12% Similarity=0.253 Sum_probs=65.3
Q ss_pred ceEEEeecCCceeee-ee--cCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEe
Q psy3712 4 GFRIYNCDPLKEKER-QD--FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRL 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~-~~--~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l 79 (109)
-.++|+.+....... .. -..+.+..+.. ..+++|..+. ...+.+||..+++.+.++.- ..+|..+..
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 304 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-------DRTIKVWNTSTCEFVRTLNGHKRGIACLQY 304 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET-------TSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC-------CCeEEEEECCcCcEEEEEcCCCCcEEEEEe
Confidence 456777765443211 11 12456665555 6677765543 36899999999999988884 568999999
Q ss_pred cCCEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 80 RRDKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 80 ~r~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+.+.+++... +.|++|++. +.+.++++
T Consensus 305 ~~~~l~~g~~dg~i~iwd~~-~~~~~~~~ 332 (435)
T 1p22_A 305 RDRLVVSGSSDNTIRLWDIE-CGACLRVL 332 (435)
T ss_dssp ETTEEEEEETTSCEEEEETT-TCCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECC-CCCEEEEE
Confidence 9998888875 689999998 45666554
No 46
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.89 E-value=0.051 Score=39.19 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=59.8
Q ss_pred CCCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC-----EEEEEeC-CeEEE
Q psy3712 22 TDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-----KIVVVLE-GLIKV 94 (109)
Q Consensus 22 ~~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-----~lvVvl~-~~i~v 94 (109)
..+++..+.... ..+++|..+. .+.+.+||..+++.+..+..+.++..+..... .+++... ..|++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSF-------DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEET-------TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeC-------CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 356788888877 6677776653 36899999999999999999999999999763 5555554 69999
Q ss_pred EEcCCCCEEeEE
Q psy3712 95 YTFIQCPQQLHI 106 (109)
Q Consensus 95 y~~~~~~~ll~~ 106 (109)
|++. +.+.+++
T Consensus 171 ~d~~-~~~~~~~ 181 (408)
T 4a11_B 171 CDLK-SGSCSHI 181 (408)
T ss_dssp EESS-SSCCCEE
T ss_pred EeCC-Ccceeee
Confidence 9998 3555544
No 47
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.88 E-value=0.073 Score=38.72 Aligned_cols=94 Identities=11% Similarity=0.073 Sum_probs=67.8
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.++|+.+..+...... ..+.+..+..-...+.+++.|.. .+.|.+||..+++.+..+.....+.++.++.+
T Consensus 56 i~v~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 56 VSIIDTATNNVIATVP-AGSSPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGK 128 (391)
T ss_dssp EEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSS
T ss_pred EEEEECCCCeEEEEEE-CCCCccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCCCCcceEEECCCCC
Confidence 4566665554432222 23467777777778888777642 36899999999999999999999999999876
Q ss_pred EEEEEe--CCeEEEEEcCCCCEEeEE
Q psy3712 83 KIVVVL--EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 ~lvVvl--~~~i~vy~~~~~~~ll~~ 106 (109)
++++.- ++.|++|++. +.+.+..
T Consensus 129 ~l~~~~~~~~~v~~~d~~-~~~~~~~ 153 (391)
T 1l0q_A 129 KLYVTNNGDKTVSVINTV-TKAVINT 153 (391)
T ss_dssp EEEEEETTTTEEEEEETT-TTEEEEE
T ss_pred EEEEEeCCCCEEEEEECC-CCcEEEE
Confidence 564444 4799999997 4565554
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.041 Score=39.32 Aligned_cols=90 Identities=18% Similarity=0.297 Sum_probs=61.2
Q ss_pred ceEEEeecCCceeeeeec--CCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCc--EEEEEE-ccCceeE
Q psy3712 4 GFRIYNCDPLKEKERQDF--TDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQ--VVICLE-FNAPVKG 76 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~--~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~--~i~el~-f~s~V~~ 76 (109)
-.+||+++.-.....+.+ +.+++..+..... .+++|..+. ...|+|||..+++ .+..+. ...+|..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------DGKVLIWKEENGRWSQIAVHAVHSASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc-------CCEEEEEEcCCCceeEeeeecCCCcceEE
Confidence 378898874333222222 3567877777755 678876653 3579999999987 444443 3568999
Q ss_pred EEecCC----EEEEEeC-CeEEEEEcCCC
Q psy3712 77 VRLRRD----KIVVVLE-GLIKVYTFIQC 100 (109)
Q Consensus 77 V~l~r~----~lvVvl~-~~i~vy~~~~~ 100 (109)
+.++.+ .+++... ..|.+|++.+.
T Consensus 107 ~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp EEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred EEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 999976 4555554 68999999853
No 49
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.73 E-value=0.062 Score=40.17 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=62.3
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++|++.......... ....+..+..-...+.++..+|. +.+.+.|||..+++.+.++.- .++|.++.++.+
T Consensus 303 I~iwd~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~-----~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg 376 (420)
T 4gga_A 303 IRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGF-----AQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 376 (420)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEECT-----TTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEeCCccccceeec-cccceeeeeecCCCCeEEEEEec-----CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 5778777665544333 23455555555666666665543 457899999999999999874 568999999865
Q ss_pred -EEEEEe-CCeEEEEEcCC
Q psy3712 83 -KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~ 99 (109)
.|+-+- +..|+||++.+
T Consensus 377 ~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 377 ATVASAAADETLRLWRCFE 395 (420)
T ss_dssp SCEEEEETTTEEEEECCSC
T ss_pred CEEEEEecCCeEEEEECCC
Confidence 555554 46899999863
No 50
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.72 E-value=0.025 Score=43.42 Aligned_cols=95 Identities=8% Similarity=0.069 Sum_probs=66.3
Q ss_pred ceEEEeecCCceeeeeec--CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE--ccCceeEEEe
Q psy3712 4 GFRIYNCDPLKEKERQDF--TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--FNAPVKGVRL 79 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~--~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~--f~s~V~~V~l 79 (109)
-.++|+........ ..+ ..+.+..+..-...+++|..+. ...+.|||..+++.+.++. ...+|.++.+
T Consensus 468 ~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~ 539 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDV-------MGKILLYDLQSREVKTSRWAFRTSKINAISW 539 (615)
T ss_dssp CEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEECCSCCCSSCEEEEEE
T ss_pred eEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCC-------CCeEEEeeCCCCcceeEeecCCCCceeEEEE
Confidence 35666665433221 111 3567777777778888877653 3679999999999988876 6788999999
Q ss_pred cC------------CEEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 80 RR------------DKIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 80 ~r------------~~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
++ +.|+.+-. ..|++|++.+..+.+.+
T Consensus 540 sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 540 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred cCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 66 56666664 58999999853255544
No 51
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.70 E-value=0.0086 Score=43.37 Aligned_cols=77 Identities=13% Similarity=0.181 Sum_probs=58.4
Q ss_pred CCCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE--------------ccCceeEEEecC---CE
Q psy3712 22 TDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--------------FNAPVKGVRLRR---DK 83 (109)
Q Consensus 22 ~~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~--------------f~s~V~~V~l~r---~~ 83 (109)
+.+++..++.-. ..+++|..+. ...|.|||..+++....+. ...+|.++.++. +.
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGS-------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEET-------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred cCCcEEEEEEecCCCCEEEEEcC-------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 467888888888 8888877663 3679999999877665555 677899999976 35
Q ss_pred EEEEe-CCeEEEEEcCCCCEEeEE
Q psy3712 84 IVVVL-EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 84 lvVvl-~~~i~vy~~~~~~~ll~~ 106 (109)
++..- +..|++|++. +.+.+..
T Consensus 115 l~s~~~d~~i~iwd~~-~~~~~~~ 137 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTN-TLQTADV 137 (408)
T ss_dssp EEEEETTSEEEEEETT-TTEEEEE
T ss_pred EEEEeCCCeEEEeeCC-CCcccee
Confidence 66665 5789999998 4565544
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.67 E-value=0.072 Score=39.94 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=62.9
Q ss_pred ceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC
Q psy3712 4 GFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD 82 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~ 82 (109)
..+||+.+.........-+.+++..+. +..+++|..+. ...|.+||..+++.+..+.- ..+|.++..+.+
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~~~v~~l~--~~~~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 224 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHTGSVLCLQ--YDERVIITGSS-------DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 224 (435)
T ss_dssp CEEEEESSSCCEEEEECCCSSCEEEEE--CCSSEEEEEET-------TSCEEEEESSSCCEEEEECCCCSCEEEEECCTT
T ss_pred eEEEEeCCCCeEEEEEcCCCCcEEEEE--ECCCEEEEEcC-------CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC
Confidence 467888777665433222345555544 46777755442 36799999999998887764 557999999999
Q ss_pred EEEEEeC-CeEEEEEcCC
Q psy3712 83 KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 83 ~lvVvl~-~~i~vy~~~~ 99 (109)
.++.... ..|++|++..
T Consensus 225 ~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 225 MMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp EEEEEETTSCEEEEECSS
T ss_pred EEEEeeCCCcEEEEeCCC
Confidence 8888876 6899999974
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.64 E-value=0.13 Score=38.42 Aligned_cols=92 Identities=11% Similarity=0.171 Sum_probs=64.1
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC--ceeEEEecCC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA--PVKGVRLRRD 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s--~V~~V~l~r~ 82 (109)
.++|+.+.........-+.+.+..+.. ..++++..+ ....+++||..+++......... .+..+.-..+
T Consensus 334 i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s-------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 334 IRIWDLENGELMYTLQGHTALVGLLRL--SDKFLVSAA-------ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN 404 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEE--CSSEEEEEE-------TTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSS
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEE--cCCEEEEEe-------CCCcEEEEECCCCceeeeecCCCCccEEEEEeCCC
Confidence 677877665554332223556666555 346665544 24689999999988887776655 4556666777
Q ss_pred EEEEEeCCeEEEEEcCCCCEEeEE
Q psy3712 83 KIVVVLEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 ~lvVvl~~~i~vy~~~~~~~ll~~ 106 (109)
.+++..++.|++|++. +.+++++
T Consensus 405 ~l~~~~dg~i~iwd~~-~g~~~~~ 427 (464)
T 3v7d_B 405 ILVSGSENQFNIYNLR-SGKLVHA 427 (464)
T ss_dssp EEEEEETTEEEEEETT-TCCEEES
T ss_pred EEEEecCCeEEEEECC-CCcEEeh
Confidence 9999999999999998 4677765
No 54
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.64 E-value=0.049 Score=40.26 Aligned_cols=88 Identities=14% Similarity=0.140 Sum_probs=60.2
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCC-ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFR-CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR-- 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~-tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r-- 81 (109)
.++|+..............+++..+..-.. .+++|-.+ ....|+|||.++++.+..+.-..+|.+|.+++
T Consensus 251 i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs-------~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 251 VSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS-------EDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp EEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE-------TTSCEEEECTTSCEEEEECCCSSCEEEEEECSSS
T ss_pred eeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe-------CCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCC
Confidence 677776554443322223567776666544 45666544 23679999999999888887788999999974
Q ss_pred -CEEEEE-eCCeEEEEEcCC
Q psy3712 82 -DKIVVV-LEGLIKVYTFIQ 99 (109)
Q Consensus 82 -~~lvVv-l~~~i~vy~~~~ 99 (109)
..|+.+ .+..|.+|+++.
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TTEEEEEETTSCEEEEECC-
T ss_pred CCEEEEEcCCCeEEEEECCC
Confidence 355544 468999999984
No 55
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.60 E-value=0.1 Score=38.60 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=66.2
Q ss_pred eEEEeecCCceeeee----ecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEe
Q psy3712 5 FRIYNCDPLKEKERQ----DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~----~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l 79 (109)
.+||+.+.-+..... .-+.+.|..+......+++|-.+. ...++|||..+++.+..+.- ..+|..+.+
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~-------d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK-------DICIKVWDLAQQVVLSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-------CCeEEEEECCCCcEEEEEcCcCCceEEEEe
Confidence 578888654432211 113578888888888888876542 35799999999999888764 568999999
Q ss_pred cCC---EEEEE-eCCeEEEEEcCCCCEEeEE
Q psy3712 80 RRD---KIVVV-LEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 80 ~r~---~lvVv-l~~~i~vy~~~~~~~ll~~ 106 (109)
+.+ .++.. .+..|++|++. +.+.+.+
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~ 207 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTR-CPKPASQ 207 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETT-SSSCEEE
T ss_pred cCCCCCceeeecccccccccccc-ccceeee
Confidence 764 34444 35789999998 4555544
No 56
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.54 E-value=0.099 Score=41.40 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=67.4
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE--------ccCceeE
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--------FNAPVKG 76 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~--------f~s~V~~ 76 (109)
.++|+..+.+......-+.+.+..+..-...+++|-.|. .+.++|||..+++.+..+. -..+|.+
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~-------D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~ 244 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG-------DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC-------CCcEEEEECCCCcEeeeeccccccccccCCCEEE
Confidence 577777776543222223567888888888888876553 3679999999999888773 4568999
Q ss_pred EEecCC--EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 77 VRLRRD--KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 77 V~l~r~--~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+.++++ +|+.+-. ..|.+|++. +.+.++++
T Consensus 245 v~~spdg~~l~s~s~D~~v~lWd~~-~~~~~~~~ 277 (611)
T 1nr0_A 245 LTWSPDGTKIASASADKTIKIWNVA-TLKVEKTI 277 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCC-CCceeeee
Confidence 999865 5555544 689999998 46666554
No 57
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.017 Score=42.26 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=55.0
Q ss_pred CCCEEEEEEcCC-ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-------cCceeEEEecCC---EEEEEeCC-
Q psy3712 23 DGGLGHVEMLFR-CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-------NAPVKGVRLRRD---KIVVVLEG- 90 (109)
Q Consensus 23 ~g~v~~veml~~-tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-------~s~V~~V~l~r~---~lvVvl~~- 90 (109)
.+.+..+..... .+++|..+. ...+.|||..+++.+.++.. ..+|..+.++++ .+++...+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGS-------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESS-------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred CCCeeEEEeCCCCCcEEEEEcC-------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 456666777666 566655442 36799999999999999988 578999999976 57777776
Q ss_pred ---eEEEEEcCC
Q psy3712 91 ---LIKVYTFIQ 99 (109)
Q Consensus 91 ---~i~vy~~~~ 99 (109)
.|++|++.+
T Consensus 238 ~~~~i~~~d~~~ 249 (416)
T 2pm9_A 238 NDPSILIWDLRN 249 (416)
T ss_dssp SSCCCCEEETTS
T ss_pred CCceEEEEeCCC
Confidence 899999984
No 58
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.51 E-value=0.11 Score=36.02 Aligned_cols=77 Identities=10% Similarity=0.117 Sum_probs=56.1
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC-EEEEEe-CCeEEEEEcC
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD-KIVVVL-EGLIKVYTFI 98 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~-~lvVvl-~~~i~vy~~~ 98 (109)
..+.+..+....... ++. |+ ....+.+||..+++.+.++. ...+|.++.++++ +++..- +..|++|++.
T Consensus 183 ~~~~i~~~~~~~~~~-~~~-~~------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FIS-CS------NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp CSSCEEEEEEEETTE-EEE-EE------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTT
T ss_pred CcccEEEEEEcCCCe-EEE-cc------CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECC
Confidence 356777777766666 433 32 24689999999999999888 5668999999977 555554 4799999998
Q ss_pred CCCEEeEEe
Q psy3712 99 QCPQQLHIY 107 (109)
Q Consensus 99 ~~~~ll~~~ 107 (109)
+ .+.+.++
T Consensus 255 ~-~~~~~~~ 262 (313)
T 3odt_A 255 N-GSLKQVI 262 (313)
T ss_dssp T-CCEEEEE
T ss_pred C-CceeEEE
Confidence 4 5666554
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.51 E-value=0.15 Score=37.35 Aligned_cols=95 Identities=9% Similarity=0.124 Sum_probs=64.5
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc----cCceeEEEe-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF----NAPVKGVRL- 79 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f----~s~V~~V~l- 79 (109)
.++|+.+.........-..+.+..+......+++|..+. ...+++||..+++.+..+.. ...|..+.+
T Consensus 163 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 163 LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASL-------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEET-------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcC-------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 678887765544332224678888888888888875553 35799999999999988864 334555554
Q ss_pred --------------------cC--CEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 80 --------------------RR--DKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 80 --------------------~r--~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+. +.+++... ..|++|++.. .+.+.++
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~ 285 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS-KEQTIQL 285 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT-CCEEEEE
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC-CceeEEc
Confidence 22 35665555 5799999984 5555443
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.48 E-value=0.0082 Score=42.75 Aligned_cols=86 Identities=5% Similarity=-0.018 Sum_probs=64.5
Q ss_pred eEEEee-cCCceeeeeec--CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCC---------CcEEEEEEccC
Q psy3712 5 FRIYNC-DPLKEKERQDF--TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK---------KQVVICLEFNA 72 (109)
Q Consensus 5 f~Iy~~-~P~~~~~~~~~--~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~---------~~~i~el~f~s 72 (109)
.++|+. +...... ... ..+++..+.... .++++..+. .+.+.+||..+ ++.+..+..+.
T Consensus 81 i~~wd~~~~~~~~~-~~~~~~~~~v~~l~~~~-~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 151 (342)
T 1yfq_A 81 ILKVDLIGSPSFQA-LTNNEANLGICRICKYG-DDKLIAASW-------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151 (342)
T ss_dssp EEEECSSSSSSEEE-CBSCCCCSCEEEEEEET-TTEEEEEET-------TSEEEEECHHHHTTBCEEEEESCSSSSSSCC
T ss_pred EEEEEeccCCceEe-ccccCCCCceEEEEeCC-CCEEEEEcC-------CCeEEEEcccccccccccccCCeeeEEeeCC
Confidence 567776 5544321 122 356777777777 777766553 47899999887 77777777888
Q ss_pred ceeEEEecCCEEEEEeCC-eEEEEEcCC
Q psy3712 73 PVKGVRLRRDKIVVVLEG-LIKVYTFIQ 99 (109)
Q Consensus 73 ~V~~V~l~r~~lvVvl~~-~i~vy~~~~ 99 (109)
+|.++.++.+.+++...+ .|++|++.+
T Consensus 152 ~v~~~~~~~~~l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 152 KIFTMDTNSSRLIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp CEEEEEECSSEEEEEESTTEEEEEESSC
T ss_pred ceEEEEecCCcEEEEeCCCeEEEEECCc
Confidence 999999999998888876 999999985
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.48 E-value=0.13 Score=36.39 Aligned_cols=97 Identities=9% Similarity=0.093 Sum_probs=66.4
Q ss_pred cceEEEeecC-Cceee--eeecCCCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCC------cEEEEEEccC
Q psy3712 3 DGFRIYNCDP-LKEKE--RQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKK------QVVICLEFNA 72 (109)
Q Consensus 3 ~Gf~Iy~~~P-~~~~~--~~~~~~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~------~~i~el~f~s 72 (109)
...++|+... ..... ......+.+..+.... ..+++|..+. ...+.|||-..+ +...++....
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-------DGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-------TSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec-------CCcEEEEEEcCCCcccccccceeeeccc
Confidence 3567888766 33221 1112356777788877 7788876553 468999998776 6677776643
Q ss_pred ----------ceeEEEecC--CEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 73 ----------PVKGVRLRR--DKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 73 ----------~V~~V~l~r--~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+|.++.++. +.|+.... ..|++|++. +.++++++
T Consensus 243 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~ 289 (342)
T 1yfq_A 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ-TRKKIKNF 289 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT-TTEEEEEC
T ss_pred ccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc-cHhHhhhh
Confidence 899999975 45666665 589999998 46777654
No 62
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.45 E-value=0.091 Score=36.53 Aligned_cols=88 Identities=11% Similarity=0.275 Sum_probs=60.0
Q ss_pred eEEEeecCCcee--eee--ecCCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCC---------cEEEEEE
Q psy3712 5 FRIYNCDPLKEK--ERQ--DFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKK---------QVVICLE 69 (109)
Q Consensus 5 f~Iy~~~P~~~~--~~~--~~~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~---------~~i~el~ 69 (109)
.+||+.+..... ... .-..+++..++.... .+++|..+. ...|+|||..++ +.+..+.
T Consensus 35 i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~-------dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY-------DKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp EEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET-------TSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred EEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC-------CCeEEEEecCCCcccccccCcceeeeec
Confidence 788988754321 111 124667888887763 677766553 367999999886 4455554
Q ss_pred -ccCceeEEEecCC----EEEEEeC-CeEEEEEcCC
Q psy3712 70 -FNAPVKGVRLRRD----KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 70 -f~s~V~~V~l~r~----~lvVvl~-~~i~vy~~~~ 99 (109)
...+|.++.++.+ .++.... ..|++|++.+
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALE 143 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSS
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCC
Confidence 3568999999975 5666554 7899999873
No 63
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.40 E-value=0.067 Score=39.66 Aligned_cols=95 Identities=8% Similarity=0.054 Sum_probs=58.3
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCc-cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC---ceeEEEec
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA---PVKGVRLR 80 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~t-n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s---~V~~V~l~ 80 (109)
.+||+.+.........-+.+.+..+..-... +++|- |+ ..+.|+|||.++++...++.... .+.++..+
T Consensus 151 i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s-~s------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLS-CS------EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEE-EE------TTSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred EEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceee-ec------cccccccccccccceeeeeecceeeccceeeeec
Confidence 5677766554432222235677777666554 44443 32 23679999999999888876543 58888886
Q ss_pred CC---EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 81 RD---KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 81 r~---~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.+ .++... +..|++|++. +.+.++++
T Consensus 224 p~~~~~l~sg~~dg~v~~wd~~-~~~~~~~~ 253 (344)
T 4gqb_B 224 PQQSEVFVFGDENGTVSLVDTK-STSCVLSS 253 (344)
T ss_dssp SSCTTEEEEEETTSEEEEEESC-C--CCEEE
T ss_pred CCCCcceEEeccCCcEEEEECC-CCcEEEEE
Confidence 42 445444 4689999998 45666654
No 64
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.38 E-value=0.18 Score=37.85 Aligned_cols=94 Identities=11% Similarity=0.156 Sum_probs=64.1
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEcc-CceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN-APVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~-s~V~~V~l~r~- 82 (109)
.+||+.+.........-+.+.+..+......++++-.| ....+++||..+++.+..+.-. ..|..+..+.+
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s-------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g 246 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS-------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE-------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe-------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCC
Confidence 45676665544322122356888888888888876544 2468999999999988877653 46889998865
Q ss_pred -EEEEEe-CCeEEEEEcCCCCEEeEE
Q psy3712 83 -KIVVVL-EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 -~lvVvl-~~~i~vy~~~~~~~ll~~ 106 (109)
.++..- +..|.+|++.. .+...+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~-~~~~~~ 271 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVAT-KECKAE 271 (410)
T ss_dssp SEEEEEETTSCEEEEETTT-CCEEEE
T ss_pred CEEEEEcCCCeEEEEECCC-CceeeE
Confidence 444444 57899999973 454443
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.36 E-value=0.087 Score=37.65 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=55.6
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC-ceeEEEecCC--EEEEEeCCeEEEEEcCC
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA-PVKGVRLRRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s-~V~~V~l~r~--~lvVvl~~~i~vy~~~~ 99 (109)
.+.+..+..-...+++|..+. .+.+.+||..+++.+.++.-.. +|..+.++++ .+++..++.|++|++.+
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSH-------DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEET-------TTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCeEEEEEECCCCCEEEEEeC-------CCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 567888888777788876653 4689999999999999888765 8999998743 66666678999999974
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.2 Score=37.71 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=53.5
Q ss_pred CCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeC--CCC---cEEEEEEccCceeEEEecCCEEEEEeCC--------
Q psy3712 24 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD--LKK---QVVICLEFNAPVKGVRLRRDKIVVVLEG-------- 90 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd--~~~---~~i~el~f~s~V~~V~l~r~~lvVvl~~-------- 90 (109)
..+.-+......++++..+++ .+.|.|||. .++ +.+..+..+.+|.++.++.+.++++..+
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~------d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~ 381 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEA------TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQK 381 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETT------CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCC
T ss_pred EEEEEEEEeCCCCEEEEEECC------CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCC
Confidence 356666777777888766643 378999998 666 7788899999999999999999998865
Q ss_pred -eEEEEEcC
Q psy3712 91 -LIKVYTFI 98 (109)
Q Consensus 91 -~i~vy~~~ 98 (109)
.|.+|.+.
T Consensus 382 ~~i~v~~~~ 390 (450)
T 2vdu_B 382 NFAKFIEYN 390 (450)
T ss_dssp CSEEEEEEE
T ss_pred cceEEEEEE
Confidence 36777765
No 67
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.34 E-value=0.051 Score=40.08 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=53.7
Q ss_pred CCCEEEEEEcCCc-cEEEEEcCCCCCCCCCceEEEEeCCCCcE----EEEEEccC-------------ceeEEEecCC--
Q psy3712 23 DGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQV----VICLEFNA-------------PVKGVRLRRD-- 82 (109)
Q Consensus 23 ~g~v~~veml~~t-n~ialVg~g~~p~~~~n~v~IwDd~~~~~----i~el~f~s-------------~V~~V~l~r~-- 82 (109)
.+.+..+..-... +++|..+. ...++|||.++++. +..+.-+. +|.++.++++
T Consensus 226 ~~~v~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 226 TEVITAAEFHPNSCNTFVYSSS-------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp CCCEEEEEECSSCTTEEEEEET-------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred CcceEEEEECCCCCcEEEEEeC-------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence 5678888877776 77766553 36799999998875 55665554 8999999876
Q ss_pred EEEEEeCCeEEEEEcCC
Q psy3712 83 KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 83 ~lvVvl~~~i~vy~~~~ 99 (109)
.|+..-...|++|++..
T Consensus 299 ~l~~~~~~~v~iwd~~~ 315 (447)
T 3dw8_B 299 YMMTRDYLSVKVWDLNM 315 (447)
T ss_dssp EEEEEESSEEEEEETTC
T ss_pred EEEEeeCCeEEEEeCCC
Confidence 77777789999999974
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.34 E-value=0.11 Score=36.75 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC-----CEEEEEe-CCeEEEEEcC
Q psy3712 33 FRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR-----DKIVVVL-EGLIKVYTFI 98 (109)
Q Consensus 33 ~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r-----~~lvVvl-~~~i~vy~~~ 98 (109)
...+++|..+ ....+.+||.++++.......+.+|..+.++. +.+++.. +..|++|++.
T Consensus 178 ~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 178 QEERVVCAGY-------DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp -CCCEEEEEE-------TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred CCCCEEEEEc-------cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 4566665544 23689999999999988999999999999975 6666666 4789999987
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.27 E-value=0.14 Score=36.11 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=53.8
Q ss_pred CCCEEEEEEcCCcc-EEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC--EEEEEe-CCeEEEEEc
Q psy3712 23 DGGLGHVEMLFRCN-YLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD--KIVVVL-EGLIKVYTF 97 (109)
Q Consensus 23 ~g~v~~veml~~tn-~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~--~lvVvl-~~~i~vy~~ 97 (109)
.+.+..+..-.... .+++.|+ ....+.+||..+++.+..+.- ..+|.++.++++ .++..- +..|.+|++
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~------~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCG------WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 244 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEE------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred cCcccceEEccCCCCcEEEEEc------CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEe
Confidence 45667776665443 3333332 236799999999998887764 558999999865 555544 479999999
Q ss_pred CCCCEEeEEe
Q psy3712 98 IQCPQQLHIY 107 (109)
Q Consensus 98 ~~~~~ll~~~ 107 (109)
. +.+.++.+
T Consensus 245 ~-~~~~~~~~ 253 (340)
T 4aow_A 245 N-EGKHLYTL 253 (340)
T ss_dssp T-TTEEEEEE
T ss_pred c-cCceeeee
Confidence 8 56776654
No 70
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.26 E-value=0.057 Score=40.08 Aligned_cols=73 Identities=10% Similarity=0.114 Sum_probs=54.0
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE-E-ccCceeEEEecCC--EEEEE-eCCeEEEEEc
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL-E-FNAPVKGVRLRRD--KIVVV-LEGLIKVYTF 97 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el-~-f~s~V~~V~l~r~--~lvVv-l~~~i~vy~~ 97 (109)
.+++..+..-...+++|.-+ ..+.|+|||.++++.+.++ + -..+|.+|.+++| +|+-+ .++.|+||++
T Consensus 269 ~~~V~~~~~Spdg~~lasgs-------~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLAS-------NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEE-------TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCCeEeEEECCCCCceEEEc-------CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 45666677767777887654 2467999999999988876 3 3678999999976 44433 4589999999
Q ss_pred CCCCE
Q psy3712 98 IQCPQ 102 (109)
Q Consensus 98 ~~~~~ 102 (109)
+.+..
T Consensus 342 p~~~~ 346 (365)
T 4h5i_A 342 PLNYA 346 (365)
T ss_dssp CTTTT
T ss_pred CCCCc
Confidence 85443
No 71
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.24 E-value=0.17 Score=35.25 Aligned_cols=97 Identities=11% Similarity=0.216 Sum_probs=65.8
Q ss_pred eEEEeecCCcee----eeeecCCCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEe
Q psy3712 5 FRIYNCDPLKEK----ERQDFTDGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~~----~~~~~~~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l 79 (109)
.+||+....+.. .......+.+..+.... ..+++++.+++ ..+.+++||...++.........+|..+..
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~ 248 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT-----SDRHIRIWNVCSGACLSAVDAHSQVCSILW 248 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT-----TTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC-----CCCEEEEEecccccccccccceeeeeeeee
Confidence 567766543221 11112356676666664 55555555544 457899999999999999999999888877
Q ss_pred cC--CEEEEEe---CCeEEEEEcCCCCEEeEEe
Q psy3712 80 RR--DKIVVVL---EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 80 ~r--~~lvVvl---~~~i~vy~~~~~~~ll~~~ 107 (109)
.. +.++++. +..|+||++. +.++++++
T Consensus 249 ~~~~~~~~~~sg~~d~~i~iwd~~-~~~~~~~l 280 (318)
T 4ggc_A 249 SPHYKELISGHGFAQNQLVIWKYP-TMAKVAEL 280 (318)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETT-TCCEEEEE
T ss_pred cccccceEEEEEcCCCEEEEEECC-CCcEEEEE
Confidence 65 4566554 5789999998 56777765
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.11 E-value=0.23 Score=41.95 Aligned_cols=95 Identities=9% Similarity=0.175 Sum_probs=68.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRR-- 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r-- 81 (109)
.+||+.........-.-+.+++..+..-...+++|..|. .+.+.|||..+++.+..+.- ..+|..+.++.
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-------DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-------CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC
Confidence 678887776654433334678888888888888877653 36799999999999988865 45799999976
Q ss_pred C--EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 82 D--KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 82 ~--~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
+ .++... +..|.+|++. +.+.+.++
T Consensus 712 ~~~~l~sg~~d~~v~vwd~~-~~~~~~~~ 739 (1249)
T 3sfz_A 712 NHLLLATGSNDFFLKLWDLN-QKECRNTM 739 (1249)
T ss_dssp SCCEEEEEETTSCEEEEETT-SSSEEEEE
T ss_pred CceEEEEEeCCCeEEEEECC-Ccchhhee
Confidence 3 344433 3689999998 45555543
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.10 E-value=0.23 Score=35.42 Aligned_cols=95 Identities=8% Similarity=-0.020 Sum_probs=62.9
Q ss_pred eEEEeecCCcee--eee--ecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeC------------------CCC
Q psy3712 5 FRIYNCDPLKEK--ERQ--DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD------------------LKK 62 (109)
Q Consensus 5 f~Iy~~~P~~~~--~~~--~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd------------------~~~ 62 (109)
.++|+.+.-... ... .-..+.+..+..-...+++|..+. ...+.+||. ..+
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC-------DFKCRIFSAYIKEVEERPAPTPWGSKMPFG 192 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET-------TSCEEEEECCCTTTSCCCCCBTTBSCCCTT
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC-------CCCEEEEEcccccccccccccccccccchh
Confidence 567777654421 111 112567888888888888876552 367999994 366
Q ss_pred cEEEEEE-ccCceeEEEecCC--EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 63 QVVICLE-FNAPVKGVRLRRD--KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 63 ~~i~el~-f~s~V~~V~l~r~--~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
+.+.++. ...+|.++.++.+ .+++.-. ..|++|++. +.+.+.++
T Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~ 240 (372)
T 1k8k_C 193 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-KKMAVATL 240 (372)
T ss_dssp CEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG-GTTEEEEE
T ss_pred hheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC-CCceeEEE
Confidence 7777663 4567999999765 6666665 589999997 35555543
No 74
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.08 E-value=0.27 Score=36.09 Aligned_cols=94 Identities=9% Similarity=0.075 Sum_probs=62.0
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC---ceeEEEecC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA---PVKGVRLRR 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s---~V~~V~l~r 81 (109)
.++|+...........-..+.+..+..-...+++|..|. ...++|||..+++.+..+.-.. .+..+.++.
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-------D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD-------DATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC-------CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 456666554443222223567888888777888876553 3679999999988877665443 567777774
Q ss_pred --CEEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 82 --DKIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 82 --~~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
..+++... ..|++|++.+ .+.+.+
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~-~~~~~~ 321 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLK-GSRVSI 321 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT-CSEEEE
T ss_pred CCCEEEEEECCCcEEEEECCC-CceEEE
Confidence 45665554 5899999974 454544
No 75
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.07 E-value=0.27 Score=36.04 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=62.6
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRR 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r 81 (109)
.++|+.+.......-.-+.+.+..+.+-.. .+++|..| ....+++||.++++.+..++- ..+|.++.+++
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs-------~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 250 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG-------CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP 250 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE-------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe-------CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC
Confidence 567777665543322223567777777664 35665544 236799999999998877764 56799999975
Q ss_pred --CEEEEEe-CCeEEEEEcCCCCEEeE
Q psy3712 82 --DKIVVVL-EGLIKVYTFIQCPQQLH 105 (109)
Q Consensus 82 --~~lvVvl-~~~i~vy~~~~~~~ll~ 105 (109)
+.++..- +..|++|++.. .+.+.
T Consensus 251 ~~~~l~s~s~D~~v~lwd~~~-~~~~~ 276 (354)
T 2pbi_B 251 SGDAFASGSDDATCRLYDLRA-DREVA 276 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTT-TEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEE
Confidence 4566555 46899999984 45443
No 76
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.06 E-value=0.091 Score=38.59 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=55.3
Q ss_pred EEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCce--eEEEecCCEEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 39 ALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 39 alVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V--~~V~l~r~~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
.++|.|. +.+..|..+|.++++.+.++..+... .++-...++|.++. ++.+++|+.. +.+++.++
T Consensus 33 LyestG~---~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~-tl~~~~ti 101 (243)
T 3mbr_X 33 LYESTGE---TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA-TLTPRARF 101 (243)
T ss_dssp EEEEECC---TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TTEEEEEE
T ss_pred EEEECCC---CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-cCcEEEEE
Confidence 4667664 34678999999999999999999876 56677889999999 8999999998 69999886
No 77
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.06 E-value=0.3 Score=36.53 Aligned_cols=95 Identities=11% Similarity=0.021 Sum_probs=62.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~- 82 (109)
.++|+...........-..+.+..+..-...+++|-.|. .+.+++||..+++...++.- ..+|..+.++.+
T Consensus 216 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~-------D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN-------DQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred EEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcC-------CCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 456666544432221223456777777677777766553 36799999999988877743 457888988764
Q ss_pred ---------------------EEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 83 ---------------------KIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 ---------------------~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
.++..-. ..|++|++. +.+.+.++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~-~~~~~~~~ 334 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS-TGMCLMTL 334 (410)
T ss_dssp GGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT-TTEEEEEE
T ss_pred cccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC-CCceEEEE
Confidence 4555554 689999998 45666654
No 78
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.06 E-value=0.24 Score=35.33 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=62.0
Q ss_pred eEEEeecCCceeeeee-cCCCCEEEEEEcC--CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEec
Q psy3712 5 FRIYNCDPLKEKERQD-FTDGGLGHVEMLF--RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLR 80 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~-~~~g~v~~veml~--~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~ 80 (109)
.++|+........... -...++..+.... ..+++|-.+ ..+.++|||..+++.+.+++- ..+|..+.++
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-------~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-------DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-------TTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-------CCCeEEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 4666654333222211 1245677776654 345665443 347899999999999988885 4579999998
Q ss_pred CCE--EEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 81 RDK--IVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 81 r~~--lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.+. |+..- +..|++|+.. +.++++++
T Consensus 238 p~~~~l~s~s~Dg~i~iWd~~-~~~~~~~~ 266 (304)
T 2ynn_A 238 PTLPIIISGSEDGTLKIWNSS-TYKVEKTL 266 (304)
T ss_dssp SSSSEEEEEETTSCEEEEETT-TCCEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECC-CCceeeec
Confidence 763 55444 4689999998 46766654
No 79
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.98 E-value=0.23 Score=34.44 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=53.5
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCC----cEEEEEE-ccCceeEEEecC----CEEEEEeC-Ce
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK----QVVICLE-FNAPVKGVRLRR----DKIVVVLE-GL 91 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~----~~i~el~-f~s~V~~V~l~r----~~lvVvl~-~~ 91 (109)
+.++|..+..-...+++|..+. ...++|||..++ +....+. ...+|.++.++. +.++.... ..
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSS-------DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEET-------TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccceeEEEEcCCCCEEEEeeC-------CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 3678888988888888876652 368999998876 3445554 456899999975 56666665 57
Q ss_pred EEEEEcCC
Q psy3712 92 IKVYTFIQ 99 (109)
Q Consensus 92 i~vy~~~~ 99 (109)
|.+|++..
T Consensus 83 v~vwd~~~ 90 (351)
T 3f3f_A 83 VKLWEEDP 90 (351)
T ss_dssp EEEEEECT
T ss_pred EEEEecCC
Confidence 99999974
No 80
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.94 E-value=0.36 Score=36.30 Aligned_cols=86 Identities=9% Similarity=0.095 Sum_probs=60.5
Q ss_pred ceEEEeecCCceeee-eecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEcc-----------
Q psy3712 4 GFRIYNCDPLKEKER-QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN----------- 71 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~-~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~----------- 71 (109)
-.+||+......... ..-..+.+..+..- ..+++|..| ..+.|.|||..+++.+..+...
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-------GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQH 292 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-------SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTS
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-------CCCeEEEEECCCCcEeeeecchhhhhhhhhhcc
Confidence 356777765444322 11135677878777 788887655 2468999999999999888753
Q ss_pred ---------------CceeEEEecC--CEEEEEe--CCeEEEEEc
Q psy3712 72 ---------------APVKGVRLRR--DKIVVVL--EGLIKVYTF 97 (109)
Q Consensus 72 ---------------s~V~~V~l~r--~~lvVvl--~~~i~vy~~ 97 (109)
..|.++.... +.+++.. ++.|+||++
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 3577888874 4677775 578999999
No 81
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.90 E-value=0.31 Score=35.28 Aligned_cols=70 Identities=13% Similarity=0.307 Sum_probs=53.3
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeC-CCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEEEcC
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD-LKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFI 98 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd-~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~ 98 (109)
..+++..+..-...+++|..| ....|+|||. ..+.....+....+|.++.++++ .+++..++.|++|++.
T Consensus 212 h~~~v~~~~~s~~g~~l~sgs-------~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 212 HESNVNHLSISPNGKYIATGG-------KDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-------TTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESS
T ss_pred ccccceEEEECCCCCEEEEEc-------CCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeC
Confidence 356787788877888886655 2468999998 45555566667788999999876 5667778899999986
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.88 E-value=0.37 Score=38.48 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=64.3
Q ss_pred eEEEeecCCceeeeeec-CCCCEEEEEEcC--CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEec
Q psy3712 5 FRIYNCDPLKEKERQDF-TDGGLGHVEMLF--RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLR 80 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~-~~g~v~~veml~--~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~ 80 (109)
.++|+.+.......... ..+++..+..-. ..++++..+. ...+.+||..+++.+.++. ...+|..+.++
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD-------DLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT-------TSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC-------CCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 56666654433322221 236777777776 6777765442 3689999999999988888 45689999998
Q ss_pred CC--EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 81 RD--KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 81 r~--~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
.+ .+++... ..|++|+.. +.+.+.+
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~-~~~~~~~ 265 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSS-TYKVEKT 265 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETT-TCSEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECC-CCcEEEE
Confidence 76 4666654 789999998 3555554
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.86 E-value=0.16 Score=35.89 Aligned_cols=75 Identities=7% Similarity=0.058 Sum_probs=54.8
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEE--EEEccCceeEEEecCC-----EEEEEe-CCeEE
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVI--CLEFNAPVKGVRLRRD-----KIVVVL-EGLIK 93 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~--el~f~s~V~~V~l~r~-----~lvVvl-~~~i~ 93 (109)
+.+++.-++.-...+.++.+|+-.. ....+.|||..+++... ......+|.++.++.+ .+++.. +..|.
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~---~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFAR---GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--C---CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred CCCceEEEEEcCCCceEEEecCccC---CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 4678888888887777777764210 14789999999887654 4456779999999875 455554 46899
Q ss_pred EEEcCC
Q psy3712 94 VYTFIQ 99 (109)
Q Consensus 94 vy~~~~ 99 (109)
+|++..
T Consensus 94 iwd~~~ 99 (357)
T 3i2n_A 94 IWNLEA 99 (357)
T ss_dssp EECTTS
T ss_pred EEeCCC
Confidence 999984
No 84
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.84 E-value=0.28 Score=34.32 Aligned_cols=96 Identities=6% Similarity=0.021 Sum_probs=62.2
Q ss_pred ceEEEeecCCceeeeeecCCC--CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC------cee
Q psy3712 4 GFRIYNCDPLKEKERQDFTDG--GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA------PVK 75 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~~~~g--~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s------~V~ 75 (109)
..++|+.+..+....-..... ....+..-...+.+++.+.+ .+.|.+||..+++.+..+..+. .+.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 355666555444322222111 24445555555566555532 3689999999999999998866 788
Q ss_pred EEEecCC--EEEEEe-------------CCeEEEEEcCCCCEEeEE
Q psy3712 76 GVRLRRD--KIVVVL-------------EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 76 ~V~l~r~--~lvVvl-------------~~~i~vy~~~~~~~ll~~ 106 (109)
++.++++ +++++. ++.|++|+.. +.+.+.+
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~-~~~~~~~ 130 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE-TLSRRKA 130 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT-TTEEEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECC-CCcEEEE
Confidence 8899854 677773 5899999997 4565554
No 85
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.80 E-value=0.33 Score=34.89 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=61.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.+||+.+.........-+.+++..+..-...+++|-.+. .+.++|||.+.+....-......|..+++...
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR-------DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET-------TSCEEEEETTSCEEEEECCCSSCEEEEEECCC--
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCC
Confidence 577877665543322224667888888777777765442 36799999875543333334567999998764
Q ss_pred ------EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 83 ------KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 83 ------~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.++..- +..|.+|++. ..+...++
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~ 192 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLN-QFQIEADF 192 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECC-cchhheee
Confidence 344444 4789999998 45655543
No 86
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.75 E-value=0.23 Score=35.22 Aligned_cols=81 Identities=10% Similarity=-0.024 Sum_probs=58.5
Q ss_pred CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC--CEEEEEeC--CeEEEEEcCCC
Q psy3712 25 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR--DKIVVVLE--GLIKVYTFIQC 100 (109)
Q Consensus 25 ~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r--~~lvVvl~--~~i~vy~~~~~ 100 (109)
+..-+..-...+.+++.+.+..+.-..+.|.+||..+++.+..+.....+.++.++. ++++|.-. +.|.+|+.. +
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-~ 120 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK-T 120 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT-T
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC-C
Confidence 444455555667776665443322236789999999999999999988899999987 45777766 799999997 4
Q ss_pred CEEeEE
Q psy3712 101 PQQLHI 106 (109)
Q Consensus 101 ~~ll~~ 106 (109)
.+.+.+
T Consensus 121 ~~~~~~ 126 (353)
T 3vgz_A 121 GEVKGR 126 (353)
T ss_dssp CCEEEE
T ss_pred CeeEEE
Confidence 555544
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.4 Score=35.40 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=49.7
Q ss_pred CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc---cCceeEEEecC--CEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 34 RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF---NAPVKGVRLRR--DKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 34 ~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f---~s~V~~V~l~r--~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
..+++|..+ ....+.+||.++++.+..+.- ..+|.++.++. +.++.... ..|++|++. ..+.++++
T Consensus 181 ~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 252 (437)
T 3gre_A 181 EKSLLVALT-------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR-FNVLIRSW 252 (437)
T ss_dssp SCEEEEEEE-------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred CCCEEEEEe-------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC-CccEEEEE
Confidence 355665544 246899999999999999986 57999999965 45666665 569999998 46777654
No 88
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.72 E-value=0.071 Score=39.36 Aligned_cols=95 Identities=11% Similarity=0.191 Sum_probs=61.2
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCcc-EEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEcc---CceeEEEec
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCN-YLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN---APVKGVRLR 80 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn-~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~---s~V~~V~l~ 80 (109)
.+||+.+.........-..+.+..+..-...+ +++..| ....++|||.++++.+..+.+. ..|..+.++
T Consensus 163 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~-------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 163 VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG-------EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE-------TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec-------cCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence 56777665544333222356677666655543 444433 2367999999999888777663 468899987
Q ss_pred CC---EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 81 RD---KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 81 r~---~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.+ .+++.. +..|++|++. +++.+.++
T Consensus 236 p~~~~~la~g~~d~~i~~wd~~-~~~~~~~~ 265 (357)
T 4g56_B 236 PEKDDTFACGDETGNVSLVNIK-NPDSAQTS 265 (357)
T ss_dssp TTSTTEEEEEESSSCEEEEESS-CGGGCEEE
T ss_pred hcccceEEEeecccceeEEECC-CCcEeEEE
Confidence 43 455544 4689999998 46666554
No 89
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.13 Score=37.42 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=63.8
Q ss_pred eEEEeecCCceeeeeecC------CCCEEEEEEcCCc-cEEEEEcCCCCCCCCCceEEEEeCCCC-cEEEEEE--ccCce
Q psy3712 5 FRIYNCDPLKEKERQDFT------DGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKK-QVVICLE--FNAPV 74 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~------~g~v~~veml~~t-n~ialVg~g~~p~~~~n~v~IwDd~~~-~~i~el~--f~s~V 74 (109)
.++|+.+........... .+.+..+..-... +++|..+... ....+.+||..++ +.+..+. ...+|
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~~~i~~~d~~~~~~~~~~~~~~~~~~v 265 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD----NDPSILIWDLRNANTPLQTLNQGHQKGI 265 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS----SSCCCCEEETTSTTSCSBCCCSCCSSCE
T ss_pred EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC----CCceEEEEeCCCCCCCcEEeecCccCce
Confidence 677777665544332222 4567777777664 5665554321 1127999999986 5555665 56789
Q ss_pred eEEEecC---CEEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 75 KGVRLRR---DKIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 75 ~~V~l~r---~~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.++.+++ +.++..- +..|++|++. +.+.++++
T Consensus 266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~-~~~~~~~~ 301 (416)
T 2pm9_A 266 LSLDWCHQDEHLLLSSGRDNTVLLWNPE-SAEQLSQF 301 (416)
T ss_dssp EEEEECSSCSSCEEEEESSSEEEEECSS-SCCEEEEE
T ss_pred eEEEeCCCCCCeEEEEeCCCCEEEeeCC-CCccceee
Confidence 9999965 4566665 4789999998 46666654
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.54 E-value=0.33 Score=35.08 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=50.1
Q ss_pred CCEEEEEEcC--CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc--cCceeEEEecCC--EEEE-EeCCeEEEEE
Q psy3712 24 GGLGHVEMLF--RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF--NAPVKGVRLRRD--KIVV-VLEGLIKVYT 96 (109)
Q Consensus 24 g~v~~veml~--~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f--~s~V~~V~l~r~--~lvV-vl~~~i~vy~ 96 (109)
+++..+..-. ..+++|-.+ ....+.+||..+++.+..... ..+|..+.++.+ .++. ..+..|++|+
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s-------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWAD-------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp SCEEEEECCC---CCEEEEEE-------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEe-------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 5577776666 667776555 236799999999988654433 446999999876 3443 2458999999
Q ss_pred cCCCCEEe
Q psy3712 97 FIQCPQQL 104 (109)
Q Consensus 97 ~~~~~~ll 104 (109)
+.+ .+.+
T Consensus 199 ~~~-~~~~ 205 (343)
T 3lrv_A 199 LSS-PDQA 205 (343)
T ss_dssp SSC-TTSC
T ss_pred CCC-CCCC
Confidence 984 4444
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.53 E-value=0.43 Score=34.57 Aligned_cols=71 Identities=13% Similarity=0.229 Sum_probs=54.9
Q ss_pred CCCCEEEEEEcCCc-cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE---ccCceeEEEecC---CEEEEEeC-CeEE
Q psy3712 22 TDGGLGHVEMLFRC-NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE---FNAPVKGVRLRR---DKIVVVLE-GLIK 93 (109)
Q Consensus 22 ~~g~v~~veml~~t-n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~---f~s~V~~V~l~r---~~lvVvl~-~~i~ 93 (109)
..+++..+..-... +++|..+. ...++|||..+++....+. ...+|.++.++. +.++.... ..|.
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSK-------GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEB-------TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred CCCCEEEEEECCCCCCEEEEEcC-------CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 35788888888776 77776553 3579999999998888876 567899999987 35555544 7899
Q ss_pred EEEcCC
Q psy3712 94 VYTFIQ 99 (109)
Q Consensus 94 vy~~~~ 99 (109)
+|++..
T Consensus 145 iwd~~~ 150 (383)
T 3ei3_B 145 LRDFSG 150 (383)
T ss_dssp EEETTS
T ss_pred EEECCC
Confidence 999984
No 92
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.45 Score=40.02 Aligned_cols=86 Identities=12% Similarity=0.250 Sum_probs=61.3
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.+||+.+......... ..++|..+.... ..++|-.+ ..+.|+|||..+++.+..+..+.+|..+.++.+
T Consensus 41 I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s-------~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~ 111 (902)
T 2oaj_A 41 VHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVIN-------AKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLD 111 (902)
T ss_dssp EEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEE-------TTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCS
T ss_pred EEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEE-------CcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCC
Confidence 5677665544332211 245677777666 44555554 247899999999999999999999999999865
Q ss_pred EEEEEeC-CeEEEEEcCC
Q psy3712 83 KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 83 ~lvVvl~-~~i~vy~~~~ 99 (109)
.+++... ..|++|++..
T Consensus 112 ~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 112 WMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp EEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCcEEEEECCC
Confidence 5666554 7899999984
No 93
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.51 E-value=0.23 Score=37.31 Aligned_cols=89 Identities=12% Similarity=0.218 Sum_probs=59.4
Q ss_pred eEEEeecCC---ceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCC-CcEEEEEE-ccCceeEEEe
Q psy3712 5 FRIYNCDPL---KEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVICLE-FNAPVKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~---~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~-~~~i~el~-f~s~V~~V~l 79 (109)
.+||++... ..........+++..+..-...+.+.++|+. ...|.|||.++ ++.+..+. ...+|.++.+
T Consensus 256 i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~------dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA------DKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp EEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET------TSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred EEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC------CCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 577777643 1221212246778888887766644445542 36899999987 56677776 4678999999
Q ss_pred cCCE---EEEEe-CCeEEEEEcCC
Q psy3712 80 RRDK---IVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 80 ~r~~---lvVvl-~~~i~vy~~~~ 99 (109)
+++. ++..- ++.|.||++..
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCCEEEEEeCCCcEEEEeCCC
Confidence 8753 44443 57999999974
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.51 E-value=0.48 Score=34.79 Aligned_cols=88 Identities=11% Similarity=0.066 Sum_probs=61.6
Q ss_pred eEEEeecCCceeeee--ecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccC-c-eeEEEe
Q psy3712 5 FRIYNCDPLKEKERQ--DFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNA-P-VKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~--~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s-~-V~~V~l 79 (109)
.+||+.+........ ....+.+..+..-...+++|..+. .+.+.|||.++++.+.++. -.+ . +..+.+
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-------DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-------TSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-------CCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 677877765554332 224667888888888888877653 3689999999999988883 332 2 777777
Q ss_pred cCC-EEEEE-----eCCeEEEEEcCC
Q psy3712 80 RRD-KIVVV-----LEGLIKVYTFIQ 99 (109)
Q Consensus 80 ~r~-~lvVv-----l~~~i~vy~~~~ 99 (109)
+.+ +++++ .+..|++|++.+
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~ 254 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKH 254 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred cCCCcEEEEeccCCCCceEEEEcCcc
Confidence 654 34443 368999999984
No 95
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.40 E-value=0.44 Score=33.62 Aligned_cols=94 Identities=11% Similarity=0.148 Sum_probs=61.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE-EEEEEccCceeE-EEecCC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV-VICLEFNAPVKG-VRLRRD 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~-i~el~f~s~V~~-V~l~r~ 82 (109)
.++|+.+..+..........+. .+..-...+.++..+.+ .+.+.+||..+++. ...+.-...... +.++.+
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d 94 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD 94 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecccCCCCccceEECCC
Confidence 4566655554433322223334 44444566666666553 35899999999987 777777777777 888865
Q ss_pred --EEEEEeCC----eEEEEEcCCCCEEeEE
Q psy3712 83 --KIVVVLEG----LIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 --~lvVvl~~----~i~vy~~~~~~~ll~~ 106 (109)
++++.-++ .|.+|+.. +.+.+.+
T Consensus 95 g~~l~~~~~~~~~~~i~v~d~~-~~~~~~~ 123 (331)
T 3u4y_A 95 DQFAVTVTGLNHPFNMQSYSFL-KNKFIST 123 (331)
T ss_dssp SSEEEECCCSSSSCEEEEEETT-TTEEEEE
T ss_pred CCEEEEecCCCCcccEEEEECC-CCCeEEE
Confidence 77766666 89999997 4566554
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.3 Score=39.89 Aligned_cols=88 Identities=18% Similarity=0.315 Sum_probs=61.1
Q ss_pred eEEEeecCCceeeeeec--CCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCc--EEEEEE-ccCceeEE
Q psy3712 5 FRIYNCDPLKEKERQDF--TDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQ--VVICLE-FNAPVKGV 77 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~--~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~--~i~el~-f~s~V~~V 77 (109)
.+||+.+.-.......+ +.++|..+..... .+++|..|. ...|++||..+++ .+..+. ...+|..+
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~-------Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------DGKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC-------CCeEEEEECCCCcccccccccCCCCCeEEE
Confidence 78888873322222222 3678888888776 788877663 3679999999987 344443 35689999
Q ss_pred EecCC----EEEEEeC-CeEEEEEcCC
Q psy3712 78 RLRRD----KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~----~lvVvl~-~~i~vy~~~~ 99 (109)
.++.+ .+++... ..|++|++.+
T Consensus 106 ~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred EECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 99965 5666655 6899999974
No 97
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.52 Score=33.39 Aligned_cols=89 Identities=15% Similarity=0.086 Sum_probs=56.6
Q ss_pred ceEEEeecCCcee--eeeecCCCCEEEEEEcC-------------CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEE--
Q psy3712 4 GFRIYNCDPLKEK--ERQDFTDGGLGHVEMLF-------------RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVI-- 66 (109)
Q Consensus 4 Gf~Iy~~~P~~~~--~~~~~~~g~v~~veml~-------------~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~-- 66 (109)
..++|+....... ....-..+++..+.... +.+++|..+. ...+.+||..+++...
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~ 198 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-------DNLVKIWKYNSDAQTYVL 198 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET-------TSCEEEEEEETTTTEEEE
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC-------CCeEEEEEecCCCcceee
Confidence 3577777654221 11122356777777776 4677766543 3579999988765332
Q ss_pred --EEE-ccCceeEEEecCC-----EEEEEe-CCeEEEEEcCC
Q psy3712 67 --CLE-FNAPVKGVRLRRD-----KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 67 --el~-f~s~V~~V~l~r~-----~lvVvl-~~~i~vy~~~~ 99 (109)
.+. ..++|.++.++.+ .++..- +..|++|++..
T Consensus 199 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 199 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 222 2568999999976 444444 46899999984
No 98
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.14 E-value=0.52 Score=32.91 Aligned_cols=69 Identities=10% Similarity=-0.049 Sum_probs=51.9
Q ss_pred EEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeC-CeEEEEEcCCCCEEeE
Q psy3712 29 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLE-GLIKVYTFIQCPQQLH 105 (109)
Q Consensus 29 veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~-~~i~vy~~~~~~~ll~ 105 (109)
+..-...+.++.. .+.|.+||..+++.+..+..+..+.++.++++ ++++.-. +.|.+|+.. +.+.+.
T Consensus 246 ~~~s~dg~~l~~~---------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~-~~~~~~ 315 (337)
T 1pby_B 246 TAVNPAKTRAFGA---------YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE-TLEKKG 315 (337)
T ss_dssp EEECTTSSEEEEE---------ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT-TCCEEE
T ss_pred EEECCCCCEEEEe---------CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc-CCcEEE
Confidence 4444555665544 26899999999999999999989999999864 5666543 789999998 456665
Q ss_pred Ee
Q psy3712 106 IY 107 (109)
Q Consensus 106 ~~ 107 (109)
++
T Consensus 316 ~~ 317 (337)
T 1pby_B 316 QV 317 (337)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 99
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.06 E-value=0.83 Score=34.84 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=56.0
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~- 82 (109)
.+||+.+ ........-+.+++.-+..-.+.+++|..|. ...|+||| .+++.+..+. ..++|.++.++.|
T Consensus 491 i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-------dg~v~lwd-~~~~~~~~~~~h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 491 VKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD-------DKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDG 561 (577)
T ss_dssp EEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEEEEET-------TSEEEEEC-TTSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC-------cCEEEEEe-CCCCEEEEEcCCCCCEEEEEEcCCC
Confidence 5677643 2222111223567888888888888877653 36799999 4677777766 4678999999875
Q ss_pred -EEEEEeC-CeEEEEE
Q psy3712 83 -KIVVVLE-GLIKVYT 96 (109)
Q Consensus 83 -~lvVvl~-~~i~vy~ 96 (109)
+|+.+-. ..|++|+
T Consensus 562 ~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 562 QTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEETTSCEEEEC
T ss_pred CEEEEEeCCCEEEEeC
Confidence 5665554 5688875
No 100
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.02 E-value=0.59 Score=32.89 Aligned_cols=67 Identities=7% Similarity=0.028 Sum_probs=48.9
Q ss_pred EEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCc-------eeEEEecCC--EEEEEe--------
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP-------VKGVRLRRD--KIVVVL-------- 88 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~-------V~~V~l~r~--~lvVvl-------- 88 (109)
...+..-...+.+++.+.+ .+.|.+||..+++.+..+..+.. +.++.++.+ ++++..
T Consensus 45 ~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 118 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 118 (349)
T ss_dssp SCEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CceeEECCCCCEEEEEeCC------CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccc
Confidence 4444555555666555432 36799999999999988887543 788889766 677776
Q ss_pred -----CCeEEEEEcC
Q psy3712 89 -----EGLIKVYTFI 98 (109)
Q Consensus 89 -----~~~i~vy~~~ 98 (109)
.+.|++|++.
T Consensus 119 ~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 119 HYVVKPPRLEVFSTA 133 (349)
T ss_dssp CEEECCCEEEEEEGG
T ss_pred ccccCCCeEEEEECC
Confidence 4899999987
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.99 E-value=0.61 Score=39.39 Aligned_cols=96 Identities=15% Similarity=0.196 Sum_probs=64.7
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~- 82 (109)
.+||+.+.......-.-+.+++..+......+-..++.++ ....+.+||..+++.+..+. ...+|.++.++.+
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~-----~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 755 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS-----NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDD 755 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE-----TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSST
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe-----CCCeEEEEECCCcchhheecCCCCCEEEEEEecCC
Confidence 6778777665543333346788888887754433333333 23679999999999887765 3568999999875
Q ss_pred -EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 83 -KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 83 -~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
.++.... ..|.+|++.+ .+...+
T Consensus 756 ~~l~s~s~dg~v~vwd~~~-~~~~~~ 780 (1249)
T 3sfz_A 756 ELLASCSADGTLRLWDVRS-ANERKS 780 (1249)
T ss_dssp TEEEEEESSSEEEEEEGGG-TEEEEE
T ss_pred CEEEEEECCCeEEEEeCCC-Ccccce
Confidence 5666554 6899999973 454443
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.80 E-value=0.12 Score=37.43 Aligned_cols=89 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred ceEEEeecCCc--eeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCc---EEEE-EEccCceeEE
Q psy3712 4 GFRIYNCDPLK--EKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ---VVIC-LEFNAPVKGV 77 (109)
Q Consensus 4 Gf~Iy~~~P~~--~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~---~i~e-l~f~s~V~~V 77 (109)
-.+||+.+... ......-+.+++..+..-...+++|..+. .+.++|||..+++ .... .....+|..+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ-------DRNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET-------TSSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC-------CCeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 36788887652 22111123678888888888888877663 3579999998876 3332 3456789999
Q ss_pred EecCC--EEEEEeC-CeEEEEEcCC
Q psy3712 78 RLRRD--KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~--~lvVvl~-~~i~vy~~~~ 99 (109)
.++.+ .++.... ..|++|++..
T Consensus 107 ~~~~~~~~l~~~~~d~~i~iwd~~~ 131 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGARVISVCYFEQ 131 (377)
T ss_dssp ECCTTSSCCEEEESSSCEEECCC--
T ss_pred EECCCCCEEEEEecCCeEEEEEECC
Confidence 99754 5665554 6899999974
No 103
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.80 E-value=0.68 Score=32.55 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=45.9
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
.+.|.+||.++++.+..+.....+.++.++++ +|++.- .+.|.+|+.. +.+.++++
T Consensus 274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~-~~~~~~~~ 332 (349)
T 1jmx_B 274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD-TLEKVKNI 332 (349)
T ss_dssp ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT-TTEEEEEE
T ss_pred cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecc-ccceeeee
Confidence 36899999999999999999888999999866 566643 3789999998 57777764
No 104
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.75 E-value=0.88 Score=33.61 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=52.0
Q ss_pred EEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-ccCceeEEEecCC--EEEEEe-CCeEEEEEcCCCC
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-FNAPVKGVRLRRD--KIVVVL-EGLIKVYTFIQCP 101 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-f~s~V~~V~l~r~--~lvVvl-~~~i~vy~~~~~~ 101 (109)
+..+..-...+++|..+. .+.++|||..+++.+..+. ...+|.++.++.+ +++..- +..|++|++.+ .
T Consensus 126 v~~v~~s~dg~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~-~ 197 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE-------DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT-G 197 (393)
T ss_dssp EEEEEECTTSSEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-T
T ss_pred EEEEEECCCCCEEEEEcC-------CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC-C
Confidence 556666666777765442 3679999999999887776 4567999999754 555554 47899999984 4
Q ss_pred EEeEE
Q psy3712 102 QQLHI 106 (109)
Q Consensus 102 ~ll~~ 106 (109)
+...+
T Consensus 198 ~~~~~ 202 (393)
T 1erj_A 198 QCSLT 202 (393)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 54443
No 105
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.65 E-value=0.22 Score=37.03 Aligned_cols=66 Identities=18% Similarity=0.174 Sum_probs=55.5
Q ss_pred EEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCce--eEEEecCCEEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 38 LALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 38 ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V--~~V~l~r~~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
..+++.|. +.+..|..+|.++++.+.++..+... .++-...++|.++. ++.+++|+.. +.+++.++
T Consensus 54 ~LyestG~---~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-t~~~~~ti 123 (262)
T 3nol_A 54 YFYESTGL---NGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-NLRQVRSF 123 (262)
T ss_dssp EEEEEEEE---TTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-TCCEEEEE
T ss_pred EEEEECCC---CCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-cCcEEEEE
Confidence 44677664 34578999999999999999999876 55788899999999 7999999998 68988876
No 106
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.65 E-value=0.27 Score=36.56 Aligned_cols=56 Identities=18% Similarity=0.283 Sum_probs=48.4
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecC--CEEEEEeCCeEEEEEcCCCC--EEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR--DKIVVVLEGLIKVYTFIQCP--QQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r--~~lvVvl~~~i~vy~~~~~~--~ll~~~ 107 (109)
..+.|.+||.++++.+.++.-.. ..++.+++ +++.+.-.+.|.||+.. +. +.++++
T Consensus 284 ~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~-t~~l~~~~~i 343 (361)
T 2oiz_A 284 PAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDIS-QPEPKLLRTI 343 (361)
T ss_dssp CCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECS-SSSCEEEEEE
T ss_pred CCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECC-CCcceeeEEe
Confidence 35789999999999999999998 99999976 48888888999999998 56 888775
No 107
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.60 E-value=0.12 Score=38.67 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=52.4
Q ss_pred EEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCce--eEEEecCCEEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 39 ALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 39 alVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V--~~V~l~r~~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
.+++.|.. ..|.++|.++++.+.++ ++... .++-...++|.++. ++.+++|+.. +.+++.++
T Consensus 67 Ly~stG~~-----g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~-Tl~~~~ti 132 (268)
T 3nok_A 67 FFESTGHQ-----GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM-PPQRERTT 132 (268)
T ss_dssp EEEEETTT-----TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT-TTEEEEEE
T ss_pred EEEEcCCC-----CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC-cCcEEEEE
Confidence 46676653 34999999999999999 88876 44888999999999 8999999998 69999886
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.59 E-value=1 Score=33.66 Aligned_cols=70 Identities=11% Similarity=0.217 Sum_probs=50.3
Q ss_pred CCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCC---cEEEEE-EccCceeEEEecCC---EEEEEe-CCeEE
Q psy3712 23 DGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKK---QVVICL-EFNAPVKGVRLRRD---KIVVVL-EGLIK 93 (109)
Q Consensus 23 ~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~---~~i~el-~f~s~V~~V~l~r~---~lvVvl-~~~i~ 93 (109)
.+.+.-+..-. ..+++|..+. ...|.|||.+++ +.+..+ ...++|..+.++++ .+++.- +..|.
T Consensus 231 ~~~v~~v~~~p~~~~~l~s~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 231 TAVVEDVAWHLLHESLFGSVAD-------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEET-------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred CCCEeeeEEeCCCCCEEEEEeC-------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 55677777776 5677766653 368999999876 566666 34678999999874 244443 47899
Q ss_pred EEEcCC
Q psy3712 94 VYTFIQ 99 (109)
Q Consensus 94 vy~~~~ 99 (109)
+|++.+
T Consensus 304 vwd~~~ 309 (430)
T 2xyi_A 304 LWDLRN 309 (430)
T ss_dssp EEETTC
T ss_pred EEeCCC
Confidence 999984
No 109
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.53 E-value=0.89 Score=33.28 Aligned_cols=70 Identities=16% Similarity=0.245 Sum_probs=51.4
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCc-----------EEEEEEcc-------------CceeEEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-----------VVICLEFN-------------APVKGVR 78 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~-----------~i~el~f~-------------s~V~~V~ 78 (109)
.+.|..++.-...+++|..|. ...|.|||..+++ ...++.-. .+|.++.
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDK-------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEET-------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cCcEEEEEECCCCCEEEEEcC-------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 478999999888899877553 3689999988776 35555544 6699999
Q ss_pred ecCC----EEEEEe-CCeEEEEEcCC
Q psy3712 79 LRRD----KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 79 l~r~----~lvVvl-~~~i~vy~~~~ 99 (109)
.+.+ .++... +..|++|++..
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~ 126 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISE 126 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEE
T ss_pred EcCCCCcceEEEeCCCCeEEEEeccc
Confidence 9986 355444 47899999873
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.39 E-value=1.1 Score=33.20 Aligned_cols=89 Identities=13% Similarity=0.221 Sum_probs=56.7
Q ss_pred ceEEEeecCCceeeeee---c--CCCCEEEEEEcC--------CccEEEEEcCCCCCCCCCceEEEEeCCCCcEE-EEEE
Q psy3712 4 GFRIYNCDPLKEKERQD---F--TDGGLGHVEMLF--------RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVV-ICLE 69 (109)
Q Consensus 4 Gf~Iy~~~P~~~~~~~~---~--~~g~v~~veml~--------~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i-~el~ 69 (109)
-.|+|+++.-....... + +.+.|.-+..-. +.++||-.| ..+.++|||..+++.+ .-..
T Consensus 112 ~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s-------~D~tv~~Wd~~~~~~~~~~~~ 184 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG-------DDCTLIIWRLTDEGPILAGYP 184 (393)
T ss_dssp CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE-------TTSEEEEEEEETTEEEEEEEE
T ss_pred cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE-------CCCeEEEEECCCCceeeeecC
Confidence 45777776544322111 1 234555555432 345666555 3478999998776544 5667
Q ss_pred ccCceeEEEecCC---EEEEEeC-CeEEEEEcCC
Q psy3712 70 FNAPVKGVRLRRD---KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 70 f~s~V~~V~l~r~---~lvVvl~-~~i~vy~~~~ 99 (109)
..++|.+|..+++ +++..-. ..|++|++..
T Consensus 185 ~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 185 LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC
Confidence 8899999999864 3555544 6899999973
No 111
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.38 E-value=1.3 Score=33.81 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=55.6
Q ss_pred CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC--EEEEEeC-CeEEEEEc
Q psy3712 22 TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD--KIVVVLE-GLIKVYTF 97 (109)
Q Consensus 22 ~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~--~lvVvl~-~~i~vy~~ 97 (109)
+.++|..+..-.+-.++|-.|. ...|+||| .+++.+..+.- ..+|.++.++++ +|+.+-. ..|+||+.
T Consensus 15 H~~~V~~~a~spdg~~las~~~-------d~~v~iWd-~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 15 HSSSVRGVAFSPDGQTIASASD-------DKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEET-------TSEEEEEC-TTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEECCCCCEEEEEeC-------CCEEEEEE-CCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 3678888888888888876543 35799999 57788887774 568999999865 5665554 67999997
Q ss_pred CCCCEEeEE
Q psy3712 98 IQCPQQLHI 106 (109)
Q Consensus 98 ~~~~~ll~~ 106 (109)
.. +.+++
T Consensus 87 ~~--~~~~~ 93 (577)
T 2ymu_A 87 NG--QLLQT 93 (577)
T ss_dssp TS--CEEEE
T ss_pred CC--CEEEE
Confidence 63 44544
No 112
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.20 E-value=0.97 Score=31.80 Aligned_cols=67 Identities=7% Similarity=0.160 Sum_probs=50.3
Q ss_pred EEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeC--Ce-EEEEEcCC
Q psy3712 29 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLE--GL-IKVYTFIQ 99 (109)
Q Consensus 29 veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~--~~-i~vy~~~~ 99 (109)
+..-...+.++ ++.+.. .+..+.+||..+++.+..+.......++.++.+ +++++-. +. |.+|++..
T Consensus 89 ~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 89 VDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred eEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 45556677777 554321 123899999999999999999888999999988 5666633 67 99999873
No 113
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.03 E-value=1.3 Score=32.56 Aligned_cols=75 Identities=9% Similarity=0.111 Sum_probs=52.4
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC--------ceeEEEecCC--EEEEEe-CCe
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA--------PVKGVRLRRD--KIVVVL-EGL 91 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s--------~V~~V~l~r~--~lvVvl-~~~ 91 (109)
.+.+.-+..-...+++|-.| ....++|||..+++.+..+.... .|.++.++.+ .++... +..
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s-------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGS-------DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp SSCCCEEEECTTSSEEEEEC-------SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred CCCeEEEEEecCCCeEEEEc-------CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 56777788887888876544 23679999999999887766532 2777887653 555554 478
Q ss_pred EEEEEcCCCCEEeE
Q psy3712 92 IKVYTFIQCPQQLH 105 (109)
Q Consensus 92 i~vy~~~~~~~ll~ 105 (109)
|++|+... .+.+.
T Consensus 322 i~vwd~~~-~~~~~ 334 (380)
T 3iz6_a 322 CYVWDTLL-AEMVL 334 (380)
T ss_dssp EEEEETTT-CCEEE
T ss_pred EEEEECCC-CceEE
Confidence 99999873 44443
No 114
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.91 E-value=1.2 Score=32.00 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=51.9
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-cCceeEEEecCC--EEEEEe-CCeEEEEEcC
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-NAPVKGVRLRRD--KIVVVL-EGLIKVYTFI 98 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~s~V~~V~l~r~--~lvVvl-~~~i~vy~~~ 98 (109)
.+.+..+..-...+++|-.+ ....++|||.++++.+..+.- ..+|.++.++++ .++.+- +..|.+|++.
T Consensus 76 ~~~V~~~~~~~~~~~l~s~s-------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 76 NHFVSDLALSQENCFAISSS-------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp SSCEEEEEECSSTTEEEEEE-------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCceEEEEECCCCCEEEEEc-------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 45677777776667765433 247899999999998888764 568999999865 555554 5789999986
No 115
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.79 E-value=0.48 Score=32.11 Aligned_cols=50 Identities=10% Similarity=0.161 Sum_probs=43.4
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEEEcCC
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~~ 99 (109)
....+.+||..+++.......+..|.++.++++ ++++..++.|++|++..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~ 71 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAG 71 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSS
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCC
Confidence 457899999999998877778889999999865 78888899999999974
No 116
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.77 E-value=2 Score=34.22 Aligned_cols=93 Identities=13% Similarity=0.174 Sum_probs=59.8
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE-----ccCceeEEEe
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE-----FNAPVKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~-----f~s~V~~V~l 79 (109)
.+||++..........-+.+++..+..-...+.+|-.|. .+.++|||...+... .+. ....|..+.+
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------D~~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-------DRTIKLWNTLGECKY-TISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-------TSCEEEECTTSCEEE-EECSSTTSCSSCEEEEEE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-------CCEEEEEECCCCcce-eeccCCCCCCCcEEEEEE
Confidence 577777665443222224677888888888888765542 367999997654332 222 2345899999
Q ss_pred cCC----EEEEE-eCCeEEEEEcCCCCEEeEE
Q psy3712 80 RRD----KIVVV-LEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 80 ~r~----~lvVv-l~~~i~vy~~~~~~~ll~~ 106 (109)
+.+ .++.. .+..|++|++.+ .+..++
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~ 556 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSN-CKLRST 556 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTT-CCEEEE
T ss_pred eCCCCcceEEEEeCCCeEEEEECCC-CcEEEE
Confidence 875 34444 358999999984 555554
No 117
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.74 E-value=0.43 Score=34.35 Aligned_cols=88 Identities=8% Similarity=-0.033 Sum_probs=53.0
Q ss_pred ceEEEeecCCc---eeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE---EEEEE--ccCcee
Q psy3712 4 GFRIYNCDPLK---EKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV---VICLE--FNAPVK 75 (109)
Q Consensus 4 Gf~Iy~~~P~~---~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~---i~el~--f~s~V~ 75 (109)
-.+||+.+.-. ......-..+++..+..-...+++|..+. .+.+.+||..+++. ...+. ...+|.
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG-------ARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES-------SSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec-------CCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 35677766543 22211113567877887777888876653 35799999998873 55665 477899
Q ss_pred EEEecCC--EEEEEeC-CeEEEEEcC
Q psy3712 76 GVRLRRD--KIVVVLE-GLIKVYTFI 98 (109)
Q Consensus 76 ~V~l~r~--~lvVvl~-~~i~vy~~~ 98 (109)
.+.++.+ .++.... ..|++|++.
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 9999876 5666555 679999984
No 118
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.58 E-value=1.3 Score=32.63 Aligned_cols=66 Identities=14% Similarity=0.139 Sum_probs=53.2
Q ss_pred EEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCc--eeEEEecCCEEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 38 LALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAP--VKGVRLRRDKIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 38 ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~--V~~V~l~r~~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
.++|+.|. +..+.|.++|..+++.+.++..++. ..++-+..+++.++. ++.+.+|+.. +.+.+.++
T Consensus 33 ~Lyvstg~---~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~-t~~v~~~i 102 (266)
T 2iwa_A 33 TLFESTGL---YGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR-TLSNIKNF 102 (266)
T ss_dssp EEEEEECS---TTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-TTEEEEEE
T ss_pred eEEEECCC---CCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-CCcEEEEE
Confidence 45666553 3468999999999999999998773 446777788999998 6899999998 68988876
No 119
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.50 E-value=1.4 Score=31.40 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=56.5
Q ss_pred eEEEeecCCceeeeeec--CCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCc--EEEEEE-ccCceeEE
Q psy3712 5 FRIYNCDPLKEKERQDF--TDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQ--VVICLE-FNAPVKGV 77 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~--~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~--~i~el~-f~s~V~~V 77 (109)
.+||+.+.-.......+ +.+.|.-+..... .+++|-.| ..+.|+|||..+++ .+.++. ...+|.++
T Consensus 37 v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s-------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v 109 (316)
T 3bg1_A 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS-------YDRKVIIWREENGTWEKSHEHAGHDSSVNSV 109 (316)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE-------TTSCEEEECCSSSCCCEEEEECCCSSCCCEE
T ss_pred EEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE-------CCCEEEEEECCCCcceEEEEccCCCCceEEE
Confidence 67888765432111122 3567777776543 56776554 23679999998874 444443 35689999
Q ss_pred EecCC----EEEEEe-CCeEEEEEcCC
Q psy3712 78 RLRRD----KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~----~lvVvl-~~~i~vy~~~~ 99 (109)
.++.+ .++..- +..|++|++..
T Consensus 110 ~~~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 110 CWAPHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp EECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred EECCCCCCcEEEEEcCCCCEEEEecCC
Confidence 99875 455544 47899999874
No 120
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.41 E-value=2.3 Score=33.54 Aligned_cols=94 Identities=13% Similarity=0.071 Sum_probs=63.4
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeC--CCCcEEEEEEccCceeEEEecC-
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD--LKKQVVICLEFNAPVKGVRLRR- 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd--~~~~~i~el~f~s~V~~V~l~r- 81 (109)
.++++.+..+....-.. ...+..+.+-...++++..+.+ +.|.+||. .+++.+.++.-.....++.+++
T Consensus 161 V~v~D~~t~~~~~~i~~-g~~~~~v~~spdg~~l~v~~~d-------~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~ 232 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGRD-------ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKF 232 (543)
T ss_dssp EEEEETTTCCEEEEEEC-STTEEEEEECTTSCEEEEEETT-------SEEEEEETTSSSCEEEEEEECCSEEEEEEECCS
T ss_pred EEEEECCCceEEEEEec-CcccceEEECCCCCEEEEECCC-------CeEEEEECcCCCCcEEEEEecCCCcceEEeCCC
Confidence 45555555544322111 1234444555566666555432 78999999 8999999999888899999986
Q ss_pred -----CEEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 82 -----DKIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 82 -----~~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
++++|.- .+.|.|++.. +.+.+.++
T Consensus 233 ~~~dg~~l~v~~~~~~~v~v~D~~-t~~~~~~i 264 (543)
T 1nir_A 233 KGYEDRYTIAGAYWPPQFAIMDGE-TLEPKQIV 264 (543)
T ss_dssp TTCTTTEEEEEEEESSEEEEEETT-TCCEEEEE
T ss_pred cCCCCCEEEEEEccCCeEEEEecc-ccccceee
Confidence 4666664 5899999987 56766654
No 121
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.36 E-value=0.78 Score=38.58 Aligned_cols=77 Identities=22% Similarity=0.266 Sum_probs=58.0
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCCE-EEEEe-CCeEEEEEcCCC
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK-IVVVL-EGLIKVYTFIQC 100 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~-lvVvl-~~~i~vy~~~~~ 100 (109)
.+++..+..-...+++|.-+ ....|+|||..+.+....+.-..+|.++.++.+. |+.+- ++.|++|++. +
T Consensus 17 ~~~V~~lafspdg~~lAsgs-------~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~-~ 88 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIAT-------VTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLY-S 88 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEE-------TTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETTCEEEEEETT-T
T ss_pred CCCcEEEEECCCCCEEEEEe-------CCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECcCeEEEEECC-C
Confidence 56788888888888887644 2368999999888877666666789999998776 54443 5799999998 4
Q ss_pred CEEeEEe
Q psy3712 101 PQQLHIY 107 (109)
Q Consensus 101 ~~ll~~~ 107 (109)
.+.++++
T Consensus 89 ~~~~~~~ 95 (902)
T 2oaj_A 89 QKVLTTV 95 (902)
T ss_dssp CSEEEEE
T ss_pred CcEEEEE
Confidence 5666654
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.95 E-value=0.59 Score=35.77 Aligned_cols=72 Identities=11% Similarity=0.095 Sum_probs=50.2
Q ss_pred CCEEEEEEcCCccEEEEE--cCCCCCCCCCceEEEEeCCCC--------cEEEEEEc----cCceeEEEecCC---EEEE
Q psy3712 24 GGLGHVEMLFRCNYLALV--GGGTHPKYPNNRVMIWDDLKK--------QVVICLEF----NAPVKGVRLRRD---KIVV 86 (109)
Q Consensus 24 g~v~~veml~~tn~ialV--g~g~~p~~~~n~v~IwDd~~~--------~~i~el~f----~s~V~~V~l~r~---~lvV 86 (109)
+.+..+..-...+++|+. +++ ..+.++|||..++ +.+..+.. .++|.++..+++ .++.
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs-----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSE-----YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETT-----TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred CcccEEEEcCCCCEEEEEEeccC-----CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 457777777778888863 222 3478999997654 44445554 678999999875 4554
Q ss_pred E-eCCeEEEEEcCCC
Q psy3712 87 V-LEGLIKVYTFIQC 100 (109)
Q Consensus 87 v-l~~~i~vy~~~~~ 100 (109)
+ .+..|++|++...
T Consensus 168 ~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 168 CLADGSIAVLQVTET 182 (434)
T ss_dssp EETTSCEEEEEESSS
T ss_pred EECCCeEEEEEcCCC
Confidence 4 4578999999853
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.94 E-value=0.7 Score=34.31 Aligned_cols=48 Identities=10% Similarity=0.279 Sum_probs=40.1
Q ss_pred CceEEEEeCCCCcEEE-EEEccCceeEEEecCC--EEEEEeCCeEEEEEcC
Q psy3712 51 NNRVMIWDDLKKQVVI-CLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~-el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~ 98 (109)
...|+|||..+++... .....++|.+|..+++ .|+++.++.+.++++.
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 4789999999877654 4567789999999875 8999999999999875
No 124
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.89 E-value=0.83 Score=35.42 Aligned_cols=58 Identities=9% Similarity=0.142 Sum_probs=49.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEccCceeEEEecCC---EEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 49 YPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD---KIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 49 ~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~---~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
-+.|.|.+.|.++++.+.++....++-++-++.| +|++.. .+.|.||+.. +.+.++++
T Consensus 308 ~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~-t~k~~~~i 370 (386)
T 3sjl_D 308 TASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE-SGEELRSV 370 (386)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETT-TCCEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECC-CCcEEEEe
Confidence 3568999999999999999999999999999877 466655 4789999998 57888775
No 125
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.76 E-value=1.8 Score=30.50 Aligned_cols=88 Identities=19% Similarity=0.308 Sum_probs=55.6
Q ss_pred eEEEeecCC--ceeeeeecCCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCc--EEEEEE-ccCceeEE
Q psy3712 5 FRIYNCDPL--KEKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQ--VVICLE-FNAPVKGV 77 (109)
Q Consensus 5 f~Iy~~~P~--~~~~~~~~~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~--~i~el~-f~s~V~~V 77 (109)
.+||+.+.- .....-.-+.++|.-+..-.. .+++|-.| ....|+|||..+++ .+..+. ...+|.++
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s-------~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v 105 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDGKVMIWKEENGRWSQIAVHAVHSASVNSV 105 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTTEEEEEEBSSSCBCCCEEECCCSSCEEEE
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc-------CCCEEEEEEcCCCceEEEEEeecCCCceeEE
Confidence 678877532 111111113567777766543 46666554 24789999998774 334443 35689999
Q ss_pred EecCC----EEEEEe-CCeEEEEEcCC
Q psy3712 78 RLRRD----KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~----~lvVvl-~~~i~vy~~~~ 99 (109)
.++.+ .++..- +..|.+|++.+
T Consensus 106 ~~~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred EeCcCCCCcEEEEEECCCcEEEEEecC
Confidence 99864 565555 47899999974
No 126
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.73 E-value=1.1 Score=31.27 Aligned_cols=91 Identities=15% Similarity=0.080 Sum_probs=58.2
Q ss_pred cceEEEeecCC--ceeeeeec-CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeC---CCCcEEEEEEccCceeE
Q psy3712 3 DGFRIYNCDPL--KEKERQDF-TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDD---LKKQVVICLEFNAPVKG 76 (109)
Q Consensus 3 ~Gf~Iy~~~P~--~~~~~~~~-~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd---~~~~~i~el~f~s~V~~ 76 (109)
...++|+.++- .......+ ..+.+..+..-...+.++..+.+ .+.+.+||. .+.+.+..+.-...+.+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 133 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVEGLDGCHS 133 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEECCCTTBCC
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccccCCCCceE
Confidence 35677777732 22111111 12344455566667777666542 367999998 55566666666778888
Q ss_pred EEecCC--EEEEEe--CCeEEEEEcCC
Q psy3712 77 VRLRRD--KIVVVL--EGLIKVYTFIQ 99 (109)
Q Consensus 77 V~l~r~--~lvVvl--~~~i~vy~~~~ 99 (109)
+.++.+ +++++- ++.|++|++..
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecC
Confidence 999876 677664 68999999974
No 127
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.47 E-value=2.1 Score=30.66 Aligned_cols=69 Identities=17% Similarity=0.304 Sum_probs=48.6
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCC--cEEEEEE-ccCceeEEEecCC----EEEEEe-CCeEEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK--QVVICLE-FNAPVKGVRLRRD----KIVVVL-EGLIKV 94 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~--~~i~el~-f~s~V~~V~l~r~----~lvVvl-~~~i~v 94 (109)
.+.+..+..-...+++|-.|. .+.++|||..++ +.+..+. ...+|.++.++++ +++..- +..|.+
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~-------D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~i 225 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSY-------DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEE
T ss_pred CCceEEEEECCCCCEEEEEcC-------CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEE
Confidence 456777777777777765542 367999998876 3444443 3458999999986 455544 578999
Q ss_pred EEcC
Q psy3712 95 YTFI 98 (109)
Q Consensus 95 y~~~ 98 (109)
|++.
T Consensus 226 w~~~ 229 (330)
T 2hes_X 226 WKYM 229 (330)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9985
No 128
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.36 E-value=2.4 Score=31.02 Aligned_cols=76 Identities=14% Similarity=0.259 Sum_probs=49.1
Q ss_pred CCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCC-CCcEEEEEE-ccCceeEEEecCC--EEEEEeC-CeEEEEEc
Q psy3712 24 GGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDL-KKQVVICLE-FNAPVKGVRLRRD--KIVVVLE-GLIKVYTF 97 (109)
Q Consensus 24 g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~-~~~~i~el~-f~s~V~~V~l~r~--~lvVvl~-~~i~vy~~ 97 (109)
+.+..+.... ..+++|-.| ....++|||.+ .++.+..+. ...+|.++.++++ .++..-. ..|++|++
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs-------~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGS-------CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEE-------TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred cCeEEEEeecCCCCEEEEEE-------CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence 3455555543 556665443 24679999987 445555544 3568999999875 5555544 68999999
Q ss_pred CCCCEEeEEe
Q psy3712 98 IQCPQQLHIY 107 (109)
Q Consensus 98 ~~~~~ll~~~ 107 (109)
. +.+.+.++
T Consensus 279 ~-~~~~~~~~ 287 (380)
T 3iz6_a 279 R-TGHQLQVY 287 (380)
T ss_dssp T-TTEEEEEE
T ss_pred C-CCcEEEEe
Confidence 8 45666543
No 129
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.96 E-value=2.3 Score=29.87 Aligned_cols=71 Identities=8% Similarity=0.079 Sum_probs=50.8
Q ss_pred EEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe--CCeEEEEEcCCCCEEe
Q psy3712 29 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL--EGLIKVYTFIQCPQQL 104 (109)
Q Consensus 29 veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl--~~~i~vy~~~~~~~ll 104 (109)
+..-...+.+++.+. ..+.+.+||..+++.+..+..+.+ .++.++.+ ++.|.. ++.|.+|+.. +.+.+
T Consensus 236 ~~~s~dg~~l~~~~~------~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~-~~~~~ 307 (353)
T 3vgz_A 236 ISLDTARQRAFITDS------KAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAK-SYKVV 307 (353)
T ss_dssp EEEETTTTEEEEEES------SSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETT-TTEEE
T ss_pred EEECCCCCEEEEEeC------CCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECC-CCeEE
Confidence 344445666644443 247899999999999999998876 56777654 677776 4899999997 46666
Q ss_pred EEe
Q psy3712 105 HIY 107 (109)
Q Consensus 105 ~~~ 107 (109)
.++
T Consensus 308 ~~~ 310 (353)
T 3vgz_A 308 KTF 310 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 130
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.86 E-value=4.4 Score=32.92 Aligned_cols=88 Identities=11% Similarity=0.108 Sum_probs=58.7
Q ss_pred eEEEeecCCce--eeeeecCCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCcEE---EEEEccCceeEE
Q psy3712 5 FRIYNCDPLKE--KERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQVV---ICLEFNAPVKGV 77 (109)
Q Consensus 5 f~Iy~~~P~~~--~~~~~~~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i---~el~f~s~V~~V 77 (109)
.+||+.+.... ........+++..+..... .+++|..|. ...+.+||..++... .--..+.+|..+
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-------dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-------DGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------TSEEEEEECCSSSCCCCEEEECCSSCEEEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-------CCcEEEEEeecCCCcceeEeecCCCceEEE
Confidence 67777776542 2111224678888888877 777766653 368999999877332 222346789999
Q ss_pred EecC---------------CEEEEEe-CCeEEEEEcCC
Q psy3712 78 RLRR---------------DKIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r---------------~~lvVvl-~~~i~vy~~~~ 99 (109)
..+. +.+++.. +..|++|++..
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~ 189 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred EecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence 9986 3555555 47899999874
No 131
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.66 E-value=2.2 Score=30.92 Aligned_cols=55 Identities=9% Similarity=-0.097 Sum_probs=45.3
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEe-cCCEEEEEe--CCeEEEEEcCCCCEEeEE
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRL-RRDKIVVVL--EGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l-~r~~lvVvl--~~~i~vy~~~~~~~ll~~ 106 (109)
.+.|.+||.++++.+.++.-.....++-+ ..+++.|.. .+.|.+++.. +.+...+
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~ 120 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGY 120 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEE
T ss_pred CCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEE
Confidence 47899999999999999976677888888 667888887 6899999987 5666544
No 132
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=91.41 E-value=1.4 Score=33.13 Aligned_cols=56 Identities=13% Similarity=0.140 Sum_probs=47.7
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecCC---EEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD---KIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~---~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
.+.|.++|.++++.+.++..+...-++-+++| ++++.- .+.|.||+.. +.+.+.++
T Consensus 297 ~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~-t~~vv~~i 357 (373)
T 2mad_H 297 AKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG-AGDQDQST 357 (373)
T ss_pred CCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC-CCCEEeee
Confidence 47899999999999999999998999999977 566664 5899999998 57877763
No 133
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.32 E-value=3.4 Score=33.14 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=50.9
Q ss_pred ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeC-CeEEEEEcC-CCCEEeEEe
Q psy3712 35 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLE-GLIKVYTFI-QCPQQLHIY 107 (109)
Q Consensus 35 tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~-~~i~vy~~~-~~~~ll~~~ 107 (109)
.|++.++..+ .+.|.+||..+++.+.++.....+-.+.+++| ++.|.-+ +.|.+|++. .+.+.+.++
T Consensus 166 ~~~~~V~~~~------~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGEEEEEETT------TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CceEEEEeCC------CCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 4555555443 47899999999999999999888889999865 6677665 589999994 346666654
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.22 E-value=3 Score=32.86 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=44.7
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-CCeEEEEEc--CCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-EGLIKVYTF--IQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-~~~i~vy~~--~~~~~ll~~~ 107 (109)
.+.|.+||..+++.+..+.....+-.+.++++ +++++- ++.|.+|++ . +.+.+.++
T Consensus 158 d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-t~~~~~~i 218 (543)
T 1nir_A 158 AGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAK-EPTKVAEI 218 (543)
T ss_dssp GTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSS-SCEEEEEE
T ss_pred CCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCC-CCcEEEEE
Confidence 47899999999999999997777889989875 555554 489999999 5 56766654
No 135
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.08 E-value=3.5 Score=33.33 Aligned_cols=69 Identities=12% Similarity=0.138 Sum_probs=57.5
Q ss_pred EEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEE-ecCCEEEEEeCCeEEEEEcC--CCCEEeE
Q psy3712 29 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVR-LRRDKIVVVLEGLIKVYTFI--QCPQQLH 105 (109)
Q Consensus 29 veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~-l~r~~lvVvl~~~i~vy~~~--~~~~ll~ 105 (109)
+-|=..++++||=. .+.|.|+|-.+++.+....|+++|.==| ++.+.|..|+++.||-|++. ..|.++.
T Consensus 71 AIMnP~~~iiALra--------g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 71 AIMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEECSSSSCEEEEE--------TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEE
T ss_pred eeeCCCCcEEEEec--------CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhhe
Confidence 44666888999975 3789999999999999999999987666 57889999999999999995 3466554
No 136
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=90.84 E-value=4.5 Score=31.15 Aligned_cols=84 Identities=11% Similarity=0.156 Sum_probs=59.9
Q ss_pred cceEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC
Q psy3712 3 DGFRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD 82 (109)
Q Consensus 3 ~Gf~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~ 82 (109)
.|.++|++.-+...-.......++.-+..+.. | +|++. +...|.+||.+.++.. ...+.|.++..+++
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p-~-~av~~-------~dG~L~v~dl~~~~~~---~~~~~Vs~v~WSpk 173 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQLKNVNN-T-LVILN-------SVNDLSALDLRTKSTK---QLAQNVTSFDVTNS 173 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEEEEECSS-E-EEEEE-------TTSEEEEEETTTCCEE---EEEESEEEEEECSS
T ss_pred CcEEEEEchhhhccCccceeecceeeEEecCC-C-EEEEE-------CCCCEEEEEccCCccc---cccCCceEEEEcCC
Confidence 57889998887754332222345555555544 3 66665 3468999999988764 25679999999999
Q ss_pred EEEEEeC-CeEEEEEcC
Q psy3712 83 KIVVVLE-GLIKVYTFI 98 (109)
Q Consensus 83 ~lvVvl~-~~i~vy~~~ 98 (109)
-+++... +++.+|+..
T Consensus 174 G~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 174 QLAVLLKDRSFQSFAWR 190 (388)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred ceEEEEcCCcEEEEcCC
Confidence 9888887 789999776
No 137
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=90.42 E-value=1.7 Score=34.00 Aligned_cols=57 Identities=9% Similarity=0.206 Sum_probs=49.4
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCC---EEEEEe--CCeEEEEEcCCCCEEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD---KIVVVL--EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~---~lvVvl--~~~i~vy~~~~~~~ll~~~ 107 (109)
+.|.|.+.|.++++.+.++.-+..-.++-+++| ++++.- .+.|.|++.. +.+.++++
T Consensus 348 ~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~-t~kvv~tI 409 (426)
T 3c75_H 348 ASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA-TGEELRSV 409 (426)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT-TCCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC-CCCEEEEe
Confidence 357899999999999999999988899999964 777777 4999999998 68888875
No 138
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=90.25 E-value=3.7 Score=29.18 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=49.7
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE--EEEEE-ccCceeEEEecC----CEEEEEe-CCeEEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV--VICLE-FNAPVKGVRLRR----DKIVVVL-EGLIKV 94 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~--i~el~-f~s~V~~V~l~r----~~lvVvl-~~~i~v 94 (109)
.+.|.-+..-...+++|-.| ..+.++|||..+++. +..+. -..+|.+|.++. +.|+.+- +..|.+
T Consensus 13 ~~~V~~v~~s~~g~~lasgs-------~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCS-------SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEE-------TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cCeEEEeeEcCCCCEEEEEe-------CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 56788888877788877654 347899999987754 33443 356899999863 4555554 578999
Q ss_pred EEcCC
Q psy3712 95 YTFIQ 99 (109)
Q Consensus 95 y~~~~ 99 (109)
|++.+
T Consensus 86 Wd~~~ 90 (316)
T 3bg1_A 86 WREEN 90 (316)
T ss_dssp ECCSS
T ss_pred EECCC
Confidence 99974
No 139
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.19 E-value=5.4 Score=31.03 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=57.4
Q ss_pred EEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEE-ecCCEEEEEeCCeEEEEEcCC--CCEEeE
Q psy3712 29 VEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVR-LRRDKIVVVLEGLIKVYTFIQ--CPQQLH 105 (109)
Q Consensus 29 veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~-l~r~~lvVvl~~~i~vy~~~~--~~~ll~ 105 (109)
+-|=..++++||=. .+.|.|+|-.+++.+....|+++|.==| ++.+.|..|+++.||-|++.+ .|.++.
T Consensus 72 AIMnP~~~ViALra--------g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 72 AIMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EEECSSSSEEEEEE--------TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEE
T ss_pred eeeCCCccEEEEec--------CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceee
Confidence 45677889999975 3679999999999999999999987666 477899999999999999963 565554
No 140
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.97 E-value=4.8 Score=30.11 Aligned_cols=73 Identities=15% Similarity=-0.003 Sum_probs=55.1
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe----CCeEEEEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL----EGLIKVYT 96 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl----~~~i~vy~ 96 (109)
.+.+..+..-...+.+|.++... ....|.+||..+++...-..++..+.++.++.| +|+++. ...|++|+
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~----~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFES----GRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCcceeeEEcCCCCEEEEEEecC----CCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEE
Confidence 45777788888888999887432 236899999999987755557788999999975 566555 34699999
Q ss_pred cCC
Q psy3712 97 FIQ 99 (109)
Q Consensus 97 ~~~ 99 (109)
+..
T Consensus 254 ~~~ 256 (415)
T 2hqs_A 254 LAS 256 (415)
T ss_dssp TTT
T ss_pred CCC
Confidence 873
No 141
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.78 E-value=0.98 Score=33.75 Aligned_cols=71 Identities=20% Similarity=0.337 Sum_probs=46.8
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE----EccCceeEEEecCC--EEEEEeC-CeEEEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL----EFNAPVKGVRLRRD--KIVVVLE-GLIKVY 95 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el----~f~s~V~~V~l~r~--~lvVvl~-~~i~vy 95 (109)
.+.|..+..-...+.++..|+. .+.|+|||.++.+....+ .-..+|.++.++.+ +|+..-. ..|+||
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s~------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATASV------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEET------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred cceEEeeeecCCCceEEEEecC------cceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 5677777776555544344432 367899998876543332 23568999998765 5665554 789999
Q ss_pred EcCC
Q psy3712 96 TFIQ 99 (109)
Q Consensus 96 ~~~~ 99 (109)
++.+
T Consensus 324 d~~~ 327 (435)
T 4e54_B 324 SASQ 327 (435)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 9973
No 142
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=89.43 E-value=1 Score=34.45 Aligned_cols=55 Identities=7% Similarity=-0.066 Sum_probs=46.4
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe---CCeEEEEEcCCCCEEeEEe
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL---EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl---~~~i~vy~~~~~~~ll~~~ 107 (109)
+.+.+||.++++.+..+......-++.+++| ++.|+. .+.|.|++.. +.+.++++
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~-t~kvv~~I 353 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA-SDQDQSSV 353 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESS-SCEEEEEC
T ss_pred CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECC-CCcEEEEE
Confidence 3566999999999999999999999999875 455555 4899999998 68988876
No 143
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.35 E-value=2.2 Score=33.72 Aligned_cols=95 Identities=7% Similarity=-0.004 Sum_probs=55.5
Q ss_pred ceEEEeecCCc-eeeeeecCCCCEEEEEEcCCc---cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEE--cc-CceeE
Q psy3712 4 GFRIYNCDPLK-EKERQDFTDGGLGHVEMLFRC---NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLE--FN-APVKG 76 (109)
Q Consensus 4 Gf~Iy~~~P~~-~~~~~~~~~g~v~~veml~~t---n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~--f~-s~V~~ 76 (109)
-.++|+.+.-. .......+.++|.-+...+.. +++|-.| ..+.++|||.++++....+. .+ ..|.+
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-------~D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-------VDGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE-------TTSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec-------cCCeEEEEECCCCCcccccccccccCcccc
Confidence 35778775321 111112235677777544433 5666554 34789999998876443332 33 35888
Q ss_pred EEecCC--EEEEEeC-CeEEEEEcCCCCEEeEE
Q psy3712 77 VRLRRD--KIVVVLE-GLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 77 V~l~r~--~lvVvl~-~~i~vy~~~~~~~ll~~ 106 (109)
|..+.+ .++..-. +.|.+|++.+ .+.+++
T Consensus 361 v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~ 392 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHP 392 (524)
T ss_dssp EEEETTTTEEEEECSSSEEEEEETTC-TTCCEE
T ss_pred eEeCCCcCeEEEeCCCCcEEEEECcc-ccccee
Confidence 999874 4444333 5799999984 444444
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.14 E-value=5.4 Score=30.33 Aligned_cols=87 Identities=9% Similarity=-0.064 Sum_probs=53.3
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC--------ceeE
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA--------PVKG 76 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s--------~V~~ 76 (109)
.+||+...........-..+.+..+..-...+++|..+ ..+.+.+||.+ ++...++..+. .|.+
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-------~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-------QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-------TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEE
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-------CCCcEEEEccC-CcccccccCCcccCCCCceeEEE
Confidence 56666654433222111234666677766677776544 23679999998 56566655431 7888
Q ss_pred EEecCCEEEEE-e--C-------CeEEEEEcCC
Q psy3712 77 VRLRRDKIVVV-L--E-------GLIKVYTFIQ 99 (109)
Q Consensus 77 V~l~r~~lvVv-l--~-------~~i~vy~~~~ 99 (109)
+..+.+..+++ . . ..+++|++.+
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 88887765552 1 1 2489999874
No 145
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=88.98 E-value=1.9 Score=31.92 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=42.5
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-----------CCeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-----------EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-----------~~~i~vy~~~~~~~ll~~~ 107 (109)
.+.+.+||..+++.+.++.-...= .+.+++| ++.|+- .+.|.+|+.. +.+.+.++
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-t~~~~~~i 97 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-KLTFEKEI 97 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-TCCEEEEE
T ss_pred cCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-CCcEEEEE
Confidence 468999999999998888765544 8888866 777775 3569999987 56776654
No 146
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.58 E-value=5.3 Score=28.71 Aligned_cols=88 Identities=15% Similarity=0.111 Sum_probs=58.6
Q ss_pred eEEEeecCCceeeeee---cCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc---cCceeEEE
Q psy3712 5 FRIYNCDPLKEKERQD---FTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF---NAPVKGVR 78 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~---~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f---~s~V~~V~ 78 (109)
.+||+.+.-....... -+.+.+..+..-...+++|..+. ...++|||..++.......+ ..+|.++.
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-------D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-------DATTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET-------TSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC-------CCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 6788877654322211 13567888888888888876653 36799999887754333333 45899999
Q ss_pred ecCC--EEEEEe-CCeEEEEEcCC
Q psy3712 79 LRRD--KIVVVL-EGLIKVYTFIQ 99 (109)
Q Consensus 79 l~r~--~lvVvl-~~~i~vy~~~~ 99 (109)
++++ .|+..- +..|.+|++..
T Consensus 113 ~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 113 WAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECT
T ss_pred EeCCCCEEEEEECCCeEEEEECCC
Confidence 9864 555554 46899999974
No 147
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=88.26 E-value=5.6 Score=32.70 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=49.9
Q ss_pred CCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE---EEEEE-cc-CceeEEEecCCEEEEEeCCeEEEEEcC
Q psy3712 24 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV---VICLE-FN-APVKGVRLRRDKIVVVLEGLIKVYTFI 98 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~---i~el~-f~-s~V~~V~l~r~~lvVvl~~~i~vy~~~ 98 (109)
+.|-.+.-.... +|..|. .|.+++||...++. ..++. .. ..|.+|..+.+.++++..++|++|++.
T Consensus 183 ~~V~sVawSPdg--Laass~-------D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~~~tIkLWd~~ 253 (588)
T 2j04_A 183 DWVTHIVWYEDV--LVAALS-------NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTCPGYVHKIDLK 253 (588)
T ss_dssp CCEEEEEEETTE--EEEEET-------TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEECSSEEEEEETT
T ss_pred ccEEEEEEcCCc--EEEEeC-------CCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEeCCeEEEEECC
Confidence 466666666666 444443 47899999988773 34553 33 579999998789999999999999998
Q ss_pred C
Q psy3712 99 Q 99 (109)
Q Consensus 99 ~ 99 (109)
+
T Consensus 254 ~ 254 (588)
T 2j04_A 254 N 254 (588)
T ss_dssp T
T ss_pred C
Confidence 4
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=88.10 E-value=6.7 Score=29.31 Aligned_cols=90 Identities=9% Similarity=-0.084 Sum_probs=58.6
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD-- 82 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~-- 82 (109)
.++++.+..+...- ....+.+..+..-.+.+.+|+++... ....|.+||..+++...-...+..+..+.++.+
T Consensus 205 i~~~d~~tg~~~~l-~~~~~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 205 LVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp EEEEETTTCCEEEE-ECCSSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEe-ecCCCcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEeCcCCCCcccceEECCCCC
Confidence 45555554433211 11245677777777888888877532 235799999998876433334567899999865
Q ss_pred EEEEEeCC----eEEEEEcCC
Q psy3712 83 KIVVVLEG----LIKVYTFIQ 99 (109)
Q Consensus 83 ~lvVvl~~----~i~vy~~~~ 99 (109)
+|++...+ +|++++...
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTS
T ss_pred EEEEEECCCCCcEEEEEECCC
Confidence 57766653 788889873
No 149
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.50 E-value=3.4 Score=30.64 Aligned_cols=57 Identities=9% Similarity=0.031 Sum_probs=48.5
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
-.+.+.+||.++.+.+.++.++..=-++.-..++|++.- .++|++++-. +.+.+.++
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~-T~~v~~~I 171 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPD-GFALVGAV 171 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTT-TCCEEEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCC-CCeEEEEE
Confidence 468999999999999999999888778888889999987 5889999866 67777664
No 150
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.20 E-value=10 Score=31.10 Aligned_cols=69 Identities=10% Similarity=0.022 Sum_probs=50.8
Q ss_pred CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCc-------EEEEEEcc-----CceeEEEecCCEEEEEe-CCe
Q psy3712 25 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-------VVICLEFN-----APVKGVRLRRDKIVVVL-EGL 91 (109)
Q Consensus 25 ~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~-------~i~el~f~-----s~V~~V~l~r~~lvVvl-~~~ 91 (109)
++.-+.-=...+++|..|. ...|+|||.+.++ .+..+.-. +.|.+|..+.+-++++. ++.
T Consensus 131 sv~svafSPDG~~LAsgs~-------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~t 203 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNE-------DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNS 203 (588)
T ss_dssp CEEEEEECSSSSCEEEEET-------TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCC
T ss_pred cEEEEEEcCCCCEEEEEcC-------CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCe
Confidence 4666777778888887774 3689999999885 24444422 48999999999854444 389
Q ss_pred EEEEEcCCC
Q psy3712 92 IKVYTFIQC 100 (109)
Q Consensus 92 i~vy~~~~~ 100 (109)
|++|++.+.
T Consensus 204 VrlWd~~~~ 212 (588)
T 2j04_A 204 VFSMTVSAS 212 (588)
T ss_dssp EEEECCCSS
T ss_pred EEEEECCCC
Confidence 999999753
No 151
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=86.95 E-value=6.9 Score=28.19 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=44.0
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecC-CEEEEEeC------------CeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRR-DKIVVVLE------------GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r-~~lvVvl~------------~~i~vy~~~~~~~ll~~~ 107 (109)
.+.|.+||.++++.+.++.......++.+.+ .++.|+.. +.|++++.. +.+...++
T Consensus 151 ~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~-t~~v~~~~ 219 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE-TFTVEKQF 219 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT-TTEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC-CCeEEEEE
Confidence 5789999999999999999887778888887 57777765 469999876 45655443
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.81 E-value=6 Score=27.36 Aligned_cols=90 Identities=10% Similarity=0.043 Sum_probs=56.4
Q ss_pred cceEEEeecCCce-e-eeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCC--CCc--EEEEEEccCceeE
Q psy3712 3 DGFRIYNCDPLKE-K-ERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL--KKQ--VVICLEFNAPVKG 76 (109)
Q Consensus 3 ~Gf~Iy~~~P~~~-~-~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~--~~~--~i~el~f~s~V~~ 76 (109)
...++|+.++-.. . .......+.+..+..-...+.++..+.+ ...+.+||.. +++ .+.++..+..+..
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPGSLTH 88 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSSCCSE
T ss_pred CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecC------CCeEEEEEecCCCCceeeccccccCCCCcE
Confidence 4567887764221 1 1111123445455666667777666643 2689999976 444 4566766778889
Q ss_pred EEecCC--EEEEEe--CCeEEEEEcC
Q psy3712 77 VRLRRD--KIVVVL--EGLIKVYTFI 98 (109)
Q Consensus 77 V~l~r~--~lvVvl--~~~i~vy~~~ 98 (109)
+.++.+ +++++. ...|.+|++.
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECC
Confidence 998765 566665 4679999983
No 153
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=86.54 E-value=6.5 Score=27.51 Aligned_cols=88 Identities=11% Similarity=0.115 Sum_probs=53.4
Q ss_pred eEEEeecCCc--eeeeeecCCCCEEEEEEcCC--ccEEEEEcCCCCCCCCCceEEEEeCCCCcE--EEE-EEccCceeEE
Q psy3712 5 FRIYNCDPLK--EKERQDFTDGGLGHVEMLFR--CNYLALVGGGTHPKYPNNRVMIWDDLKKQV--VIC-LEFNAPVKGV 77 (109)
Q Consensus 5 f~Iy~~~P~~--~~~~~~~~~g~v~~veml~~--tn~ialVg~g~~p~~~~n~v~IwDd~~~~~--i~e-l~f~s~V~~V 77 (109)
.+||+.+.-. .........+++..+..-.. .+++|..+ ..+.+++||..++.. ... -....+|.++
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 151 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTSEEEEEEBCSSSCBCCEEEECCSSCEEEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-------CCCcEEEEEecCCCceeeeeeecccCccceE
Confidence 5677766432 11111113456777777665 45665544 247899999876531 112 2345678889
Q ss_pred EecCC---------------EEEEEeC-CeEEEEEcCC
Q psy3712 78 RLRRD---------------KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~---------------~lvVvl~-~~i~vy~~~~ 99 (109)
.++.+ +|+..-. ..|++|++..
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEET
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 88874 5666554 6899999874
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=86.21 E-value=4.6 Score=31.83 Aligned_cols=67 Identities=10% Similarity=-0.013 Sum_probs=51.4
Q ss_pred CCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEEEcCC
Q psy3712 24 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~~ 99 (109)
.++.-+..-.+ +.+++..+ ..+.+||..+++...-...+..+.++.++.| +|+.+-++.|+++++..
T Consensus 82 ~~v~~~~~spd-~~~~~~~~--------~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQ--------GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEEET--------TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEEEC--------CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCc
Confidence 35666666666 66766643 5899999998876655556678999999875 78888899999999973
No 155
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=86.19 E-value=1.6 Score=33.72 Aligned_cols=47 Identities=23% Similarity=0.268 Sum_probs=34.3
Q ss_pred CceEEEEeCCCCcEEEEEEcc-Ccee-EEEecCC--EEEEEe-CCeEEEEEc
Q psy3712 51 NNRVMIWDDLKKQVVICLEFN-APVK-GVRLRRD--KIVVVL-EGLIKVYTF 97 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~-s~V~-~V~l~r~--~lvVvl-~~~i~vy~~ 97 (109)
.+.++|||..+++.+.+++=. ..+. .+.++.| .|+-.- ++.|+||++
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 468999999999999988622 2344 5888886 555444 568999985
No 156
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=85.96 E-value=8.1 Score=28.04 Aligned_cols=57 Identities=9% Similarity=-0.005 Sum_probs=47.5
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
-.+.+.+||.++.+.+.++.++..=.++.-..++|++.-. ++|++++-. +.+.+.++
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~-t~~~~~~I 140 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPD-TLQQVGSI 140 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTT-TCCEEEEE
T ss_pred eCCEEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCC-CCeEEEEE
Confidence 4689999999999999999999887888888888888865 688888866 56766654
No 157
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=85.06 E-value=6.6 Score=26.22 Aligned_cols=85 Identities=11% Similarity=-0.094 Sum_probs=55.0
Q ss_pred eEEEeecCCceeeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCC-CcEEEEEEcc--CceeEEEecC
Q psy3712 5 FRIYNCDPLKEKERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK-KQVVICLEFN--APVKGVRLRR 81 (109)
Q Consensus 5 f~Iy~~~P~~~~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~-~~~i~el~f~--s~V~~V~l~r 81 (109)
.++|+.+......... ..+.+..+..-...+++|..+. ..+.+||..+ ++......-. ..|..+.++.
T Consensus 24 i~~~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQ-TPELFEAPNWSPDGKYLLLNSE--------GLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEETTTTEEEEEEE-ESSCCEEEEECTTSSEEEEEET--------TEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred EEEEeCCCCceeeecc-CCcceEeeEECCCCCEEEEEcC--------CeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4556655443321112 2567888888888888888643 4799999998 7766544343 4677788875
Q ss_pred C--EEEEEe-----CCeEEEEEcC
Q psy3712 82 D--KIVVVL-----EGLIKVYTFI 98 (109)
Q Consensus 82 ~--~lvVvl-----~~~i~vy~~~ 98 (109)
+ +++++. ..+|+.++..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETT
T ss_pred CCCEEEEEEeCCCCcceEEEEECC
Confidence 5 666666 3466666664
No 158
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=84.73 E-value=9 Score=27.48 Aligned_cols=87 Identities=11% Similarity=0.196 Sum_probs=56.6
Q ss_pred ceEEEeecCCcee--ee-eecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc---cCceeEE
Q psy3712 4 GFRIYNCDPLKEK--ER-QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF---NAPVKGV 77 (109)
Q Consensus 4 Gf~Iy~~~P~~~~--~~-~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f---~s~V~~V 77 (109)
-.+||+.+.-... .. ..-..+.+..+..-...+++|..+. ...+++||..+++..+..++ .++|.++
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-------d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l 200 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY-------DDTVKLYREEEDDWVCCATLEGHESTVWSL 200 (345)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC-------CCcEEEEEecCCCEEEEEEecCCCCceEEE
Confidence 3567776543221 11 1113456777777777777766542 36799999998876655554 4589999
Q ss_pred EecCC--EEEEEeC-CeEEEEEc
Q psy3712 78 RLRRD--KIVVVLE-GLIKVYTF 97 (109)
Q Consensus 78 ~l~r~--~lvVvl~-~~i~vy~~ 97 (109)
.++.+ +|+..-. ..|+||+.
T Consensus 201 ~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 201 AFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEecc
Confidence 99865 5665544 68999986
No 159
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=84.33 E-value=10 Score=27.86 Aligned_cols=57 Identities=7% Similarity=0.130 Sum_probs=46.8
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
-.+.+.+||.++.+.+.++.++..=.++.-..++|++.- .++|++.+-. +.+.+.++
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~-T~~v~~~I 162 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPE-SLTPVRTI 162 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTT-TCSEEEEE
T ss_pred eCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCC-CCeEEEEE
Confidence 458999999999999999999887778888888888887 3678888876 56766654
No 160
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=83.09 E-value=12 Score=29.61 Aligned_cols=64 Identities=11% Similarity=0.032 Sum_probs=46.6
Q ss_pred EEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCC---cEEEEEE-ccCceeEEEecCC--EEEEEeCCeEEEEEcCC
Q psy3712 27 GHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK---QVVICLE-FNAPVKGVRLRRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 27 ~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~---~~i~el~-f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~~ 99 (109)
.-+..-.+...+|+.+. ..+.+||..++ +.. .+. ....+..+.++.| +|+.+..+.|+++++..
T Consensus 112 ~~~~~SpDg~~l~~~~~--------~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~ 181 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG--------GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLAS 181 (741)
T ss_dssp CCCEECTTSSEEEEEET--------TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred ceeEECCCCCEEEEEeC--------CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeCCcEEEEecCC
Confidence 33445556677777664 67999999887 433 333 3467999999876 68888899999999974
No 161
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=81.61 E-value=17 Score=28.40 Aligned_cols=74 Identities=12% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC----ceeEEEecCCEEEEEeC-CeEEEEEc
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA----PVKGVRLRRDKIVVVLE-GLIKVYTF 97 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s----~V~~V~l~r~~lvVvl~-~~i~vy~~ 97 (109)
.+.+.-+..-...+++|-.| ..+.++|||..+++.+.++.... .+.++....+.++.+-. ..+.+|+.
T Consensus 239 ~~~V~~v~~spdg~~l~s~s-------~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~ 311 (611)
T 1nr0_A 239 SGSVFGLTWSPDGTKIASAS-------ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 311 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred CCCEEEEEECCCCCEEEEEe-------CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence 56777778777778876655 24789999999999888887543 44556666666655544 78889987
Q ss_pred CCCCEEe
Q psy3712 98 IQCPQQL 104 (109)
Q Consensus 98 ~~~~~ll 104 (109)
. ..+.+
T Consensus 312 ~-~~~~~ 317 (611)
T 1nr0_A 312 E-LGSID 317 (611)
T ss_dssp T-TTEEE
T ss_pred C-CCCcc
Confidence 6 34433
No 162
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=81.60 E-value=16 Score=28.05 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=45.8
Q ss_pred EEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCc-EEEEEEccCceeEEEecCCEEEEEeC-CeEEEEEcCC
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQ-VVICLEFNAPVKGVRLRRDKIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~-~i~el~f~s~V~~V~l~r~~lvVvl~-~~i~vy~~~~ 99 (109)
+..+.. ..+++++. . ...|.+||..+.. .-..-.+..+|.+++.....+++++. ..+++|++.+
T Consensus 90 V~~l~f--d~~~L~v~-~-------~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-T-------RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEEEEE--ETTEEEEE-E-------SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred eeEEEE--CCCEEEEE-c-------CCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccC
Confidence 666666 66777654 2 2479999976433 33455778889999988876777655 8999999983
No 163
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=81.20 E-value=17 Score=27.99 Aligned_cols=56 Identities=14% Similarity=0.099 Sum_probs=34.7
Q ss_pred CCceEEEEeCCCCcEEEEEEc----cCceeEEEecCCEEEE-E--------------eCCeEEEEEcCCCCEEeEE
Q psy3712 50 PNNRVMIWDDLKKQVVICLEF----NAPVKGVRLRRDKIVV-V--------------LEGLIKVYTFIQCPQQLHI 106 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f----~s~V~~V~l~r~~lvV-v--------------l~~~i~vy~~~~~~~ll~~ 106 (109)
..+.++|||.++++.+..++= ...|..+.++++-..+ + .+..|.+|+.. +-+.+++
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~-tgk~l~v 275 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK-TTLSVGV 275 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT-TTEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC-CCEEEEE
Confidence 358899999999999888862 2244444455443322 1 23578888876 3454443
No 164
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=81.07 E-value=12 Score=26.46 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=37.2
Q ss_pred CceEEEEeCCCCcEEEEEEccC--ceeEEEecCC-EEEEEeCCeEEEEEc
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNA--PVKGVRLRRD-KIVVVLEGLIKVYTF 97 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s--~V~~V~l~r~-~lvVvl~~~i~vy~~ 97 (109)
.+.|.+||.++++.+-++..+. .+.++.+..+ ++++.-.+.|+.|+-
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~ 63 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR 63 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC
Confidence 4789999999999999998875 5777777544 677777788888876
No 165
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=80.72 E-value=13 Score=26.43 Aligned_cols=87 Identities=14% Similarity=0.155 Sum_probs=53.0
Q ss_pred eEEEeecCC--ceeeee-ec-CCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCC-------cEEEEEE-ccC
Q psy3712 5 FRIYNCDPL--KEKERQ-DF-TDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKK-------QVVICLE-FNA 72 (109)
Q Consensus 5 f~Iy~~~P~--~~~~~~-~~-~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~-------~~i~el~-f~s 72 (109)
.++|+.+.- ...... .- +.+++.-+..-...+++|..+. ...++|||.... +.+..+. -..
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-------D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 108 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-------DSTVSIWAKEESADRTFEMDLLAIIEGHEN 108 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-------TSCEEEEEC-------CCCEEEEEEC----
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-------CCcEEEEEcccCcCccccceeEEEEcCCCC
Confidence 577777542 222111 11 3567888888888888876553 367999998532 3333332 346
Q ss_pred ceeEEEecCC--EEEEEe-CCeEEEEEcC
Q psy3712 73 PVKGVRLRRD--KIVVVL-EGLIKVYTFI 98 (109)
Q Consensus 73 ~V~~V~l~r~--~lvVvl-~~~i~vy~~~ 98 (109)
+|.++.++++ .|+.+- +..|++|++.
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 8999999865 555554 5789999994
No 166
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.55 E-value=15 Score=27.12 Aligned_cols=70 Identities=14% Similarity=0.244 Sum_probs=47.8
Q ss_pred CCCEEEEEEcC-CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc---cCceeEEEecC---CEEEEEe-CCeEEE
Q psy3712 23 DGGLGHVEMLF-RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF---NAPVKGVRLRR---DKIVVVL-EGLIKV 94 (109)
Q Consensus 23 ~g~v~~veml~-~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f---~s~V~~V~l~r---~~lvVvl-~~~i~v 94 (109)
+..|..++--. ..++||. |+ ....|+|||..+++....+.+ ..+|.+|.++. +.|+.+- +..|.+
T Consensus 119 ~~~V~~l~~~P~~~~~las-Gs------~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAV-GS------KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp SSCEEEEEECSSCTTCEEE-EE------TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCEEEEEEeCCCCCEEEE-Ee------CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 45566666653 4567654 43 235799999988776666655 45899999973 3565554 478999
Q ss_pred EEcCC
Q psy3712 95 YTFIQ 99 (109)
Q Consensus 95 y~~~~ 99 (109)
|++..
T Consensus 192 wd~~~ 196 (435)
T 4e54_B 192 QDFKG 196 (435)
T ss_dssp EETTS
T ss_pred eeccC
Confidence 99974
No 167
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=77.61 E-value=16 Score=25.65 Aligned_cols=58 Identities=28% Similarity=0.378 Sum_probs=45.1
Q ss_pred CccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecC-CEEEEEeCCeEEEEEcC
Q psy3712 34 RCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRR-DKIVVVLEGLIKVYTFI 98 (109)
Q Consensus 34 ~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r-~~lvVvl~~~i~vy~~~ 98 (109)
+.+-+.+++.. .+.|..||..+++. ..+.++..+.++.+.+ .+++|...+.|++|+..
T Consensus 23 ~~~~l~~~d~~------~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~ 81 (297)
T 3g4e_A 23 VSNSLLFVDIP------AKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWK 81 (297)
T ss_dssp TTTEEEEEETT------TTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETT
T ss_pred CCCEEEEEECC------CCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECC
Confidence 45556666643 46899999988775 5677889999998875 46888999999999986
No 168
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=77.48 E-value=37 Score=29.79 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=48.5
Q ss_pred cEEEEEcCCCC----CCCCCceEEEEeCC--CCcEEEEEEccCceeEEEecCCEEEEEeCCeEEEEEcCCC
Q psy3712 36 NYLALVGGGTH----PKYPNNRVMIWDDL--KKQVVICLEFNAPVKGVRLRRDKIVVVLEGLIKVYTFIQC 100 (109)
Q Consensus 36 n~ialVg~g~~----p~~~~n~v~IwDd~--~~~~i~el~f~s~V~~V~l~r~~lvVvl~~~i~vy~~~~~ 100 (109)
.++ +||.+.. ...+.-.+.+|+.. +=+.+.+.+.+.+|.++.-=.++|++...++++||++.+.
T Consensus 845 ~~l-vVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~ 914 (1158)
T 3ei3_A 845 TYF-IVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTE 914 (1158)
T ss_dssp CEE-EEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTT
T ss_pred EEE-EEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCC
Confidence 455 6776421 12255678888864 3456678888999999998899999999999999999853
No 169
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=76.63 E-value=22 Score=28.05 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=56.1
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEcc-------------------------CceeEE
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFN-------------------------APVKGV 77 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~-------------------------s~V~~V 77 (109)
.+.+.-+..-.+...+|.++.... ..+...+.+||..+++....+... ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~-~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDS-DRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSS-CTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCC-CCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 456777888888889999875211 012358999999999876666554 237788
Q ss_pred EecCC--EEEEEeCCeEEEEEcCC
Q psy3712 78 RLRRD--KIVVVLEGLIKVYTFIQ 99 (109)
Q Consensus 78 ~l~r~--~lvVvl~~~i~vy~~~~ 99 (109)
.++.| +|+++....|++|++..
T Consensus 115 ~~SpDg~~l~~~~~~~i~~~d~~~ 138 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGGELYLYDLKQ 138 (741)
T ss_dssp EECTTSSEEEEEETTEEEEEESSS
T ss_pred EECCCCCEEEEEeCCcEEEEECCC
Confidence 88876 68888889999999974
No 170
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=76.23 E-value=16 Score=28.42 Aligned_cols=54 Identities=6% Similarity=-0.045 Sum_probs=43.8
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-----------CCeEEEEEcCCCCEEeEEe
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-----------EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-----------~~~i~vy~~~~~~~ll~~~ 107 (109)
+.|.++|..+++.+.++.....= ++-+++| ++.|+- .+.|.+++.. +.+.+.++
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-t~~vv~~I 165 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-TFLPIADI 165 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCCEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-CCcEEEEE
Confidence 89999999999999999886644 8888876 577775 4689999998 57777665
No 171
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=74.25 E-value=20 Score=25.74 Aligned_cols=48 Identities=13% Similarity=0.291 Sum_probs=37.2
Q ss_pred CceEEEEeCCCCcEEEEEEccCc-------eeEEEec--CCEEEEE-----eCCeEEEEEcC
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAP-------VKGVRLR--RDKIVVV-----LEGLIKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~-------V~~V~l~--r~~lvVv-----l~~~i~vy~~~ 98 (109)
..+|.+||.++++.+..+.++.+ .-++.+. ..++.|. ....|.+|+..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 46899999999998888988743 4677777 3566666 45789999986
No 172
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=72.10 E-value=23 Score=27.70 Aligned_cols=73 Identities=7% Similarity=-0.051 Sum_probs=51.2
Q ss_pred EEEEEEcCCccEEEEEcCCCCC--CCCCceEEEEeCCCCcEEEEEEccC----ceeEEEecCC--EEEEEeCCeEEEEEc
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHP--KYPNNRVMIWDDLKKQVVICLEFNA----PVKGVRLRRD--KIVVVLEGLIKVYTF 97 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p--~~~~n~v~IwDd~~~~~i~el~f~s----~V~~V~l~r~--~lvVvl~~~i~vy~~ 97 (109)
+.-+..-.+.+.+|+.+..... ......+.+||..+++. ..+.-.. .+..+.++.| +|+.+..+.|++++.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEEC
Confidence 6667777788888888643221 11236899999998875 3343322 2778888865 788888899999998
Q ss_pred CC
Q psy3712 98 IQ 99 (109)
Q Consensus 98 ~~ 99 (109)
..
T Consensus 142 ~~ 143 (723)
T 1xfd_A 142 VG 143 (723)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 173
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=72.04 E-value=9.7 Score=26.79 Aligned_cols=27 Identities=11% Similarity=0.165 Sum_probs=21.1
Q ss_pred ccEEEEEcCCCCCCCCCceEEEEeCCCCcEE
Q psy3712 35 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 35 tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i 65 (109)
.+.+.++||+.. .+.+.+||..+++-.
T Consensus 11 ~~~l~~~GG~~~----~~~~~~~d~~~~~W~ 37 (306)
T 3ii7_A 11 HDYRIALFGGSQ----PQSCRYFNPKDYSWT 37 (306)
T ss_dssp CCEEEEEECCSS----TTSEEEEETTTTEEE
T ss_pred cceEEEEeCCCC----CceEEEecCCCCCEe
Confidence 367888888754 688999999988744
No 174
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=71.11 E-value=29 Score=25.75 Aligned_cols=53 Identities=4% Similarity=-0.043 Sum_probs=41.2
Q ss_pred eEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-----------CCeEEEEEcCCCCEEeEEe
Q psy3712 53 RVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-----------EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 53 ~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-----------~~~i~vy~~~~~~~ll~~~ 107 (109)
.|.+||..+++.+.++.-...= ++.++.| ++.|+- .+.|.+|+.. +.+.+.++
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~-t~~~~~~i 113 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV-TFLPIADI 113 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC-CCcEEEEE
Confidence 8999999999999888765544 8888876 677775 4679999997 56666543
No 175
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=70.45 E-value=24 Score=26.59 Aligned_cols=53 Identities=2% Similarity=-0.241 Sum_probs=43.3
Q ss_pred eEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe-----------CCeEEEEEcCCCCEEeEEe
Q psy3712 53 RVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL-----------EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 53 ~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl-----------~~~i~vy~~~~~~~ll~~~ 107 (109)
.|.++|..+++.+.++.-...= ++.++.| ++.|.- .+.|.+++.. +.+.++++
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~-T~~vv~~I 112 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV-TFLPIADI 112 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT-TCCEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC-CCCEEEEE
Confidence 8899999999999999875533 8888765 788875 4789999998 67877775
No 176
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=70.30 E-value=24 Score=27.08 Aligned_cols=55 Identities=9% Similarity=0.014 Sum_probs=42.7
Q ss_pred ceEEEEeCCCCcEEEEEEccC--------ceeEEEecC--CEEEEEe---CCeEEEEEcCCCCEEeEEe
Q psy3712 52 NRVMIWDDLKKQVVICLEFNA--------PVKGVRLRR--DKIVVVL---EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s--------~V~~V~l~r--~~lvVvl---~~~i~vy~~~~~~~ll~~~ 107 (109)
+.|.+||..+++.+.++..+. .-.++.++. +++.|.- .+.|.|.+.. +.+.+.++
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~-t~~vv~tI 176 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE-GKAFKRML 176 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC-CCcEEEEE
Confidence 579999999999999998864 334566654 5777774 4789999998 57887765
No 177
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=69.53 E-value=58 Score=28.54 Aligned_cols=89 Identities=10% Similarity=0.094 Sum_probs=52.6
Q ss_pred eEEEeecCCce--eeeeecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE-EEEEE-ccCc-eeEEEe
Q psy3712 5 FRIYNCDPLKE--KERQDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV-VICLE-FNAP-VKGVRL 79 (109)
Q Consensus 5 f~Iy~~~P~~~--~~~~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~-i~el~-f~s~-V~~V~l 79 (109)
..||.....+. ....+. .|++..+..+.. .++|-+| ++|+|||-.+++. .+|-. |++- ++.++.
T Consensus 866 i~vf~v~~~kL~lv~~~~v-~g~v~al~~~~g-~Lla~ig---------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~ 934 (1158)
T 3ei3_A 866 IVVFQYSDGKLQTVAEKEV-KGAVYSMVEFNG-KLLASIN---------STVRLYEWTTEKELRTECNHYNNIMALYLKT 934 (1158)
T ss_dssp EEEEEEETTEEEEEEEEEE-SSCEEEEEEETT-EEEEEET---------TEEEEEEECTTSCEEEEEEECCCSCEEEEEE
T ss_pred EEEEEEECCEEEEEEEEEc-CCcCEEEeeeCC-EEEEEcC---------CEEEEEECCCCceEEEEeeccccEEEEEEec
Confidence 56677653322 222333 666666665544 5666665 5899999886653 33433 3331 346777
Q ss_pred cCCEEEEEeC-CeEEEEEcCCCCEEe
Q psy3712 80 RRDKIVVVLE-GLIKVYTFIQCPQQL 104 (109)
Q Consensus 80 ~r~~lvVvl~-~~i~vy~~~~~~~ll 104 (109)
.+++++|.=- ++|.++.+...+..|
T Consensus 935 ~~~~I~vgD~~~Sv~~~~y~~~~~~L 960 (1158)
T 3ei3_A 935 KGDFILVGDLMRSVLLLAYKPMEGNF 960 (1158)
T ss_dssp ETTEEEEEESSBCEEEEEEETTTTEE
T ss_pred cCCEEEEEEhhheEEEEEEEcCCCeE
Confidence 7888887643 778877765333333
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=68.74 E-value=43 Score=26.70 Aligned_cols=56 Identities=7% Similarity=0.025 Sum_probs=44.9
Q ss_pred CceEEEEeCC--CCcEEEEEEccCceeEEEecC------CEEEEEeC--CeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDL--KKQVVICLEFNAPVKGVRLRR------DKIVVVLE--GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~--~~~~i~el~f~s~V~~V~l~r------~~lvVvl~--~~i~vy~~~~~~~ll~~~ 107 (109)
.+.|.+||.. +++.+.++.-...-.++.+++ ++++|+-+ +.+.|++.. +.+.+.++
T Consensus 217 dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~-t~~~~~~i 282 (567)
T 1qks_A 217 DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE-TLEPKKIQ 282 (567)
T ss_dssp TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT-TCCEEEEE
T ss_pred CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC-CCcEEEEE
Confidence 3689999995 889999999888889999983 36666554 899999976 68877764
No 179
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.40 E-value=6.6 Score=36.03 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=51.9
Q ss_pred EEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEE-ecCCEEEEEeCCeEEEEEcC
Q psy3712 30 EMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVR-LRRDKIVVVLEGLIKVYTFI 98 (109)
Q Consensus 30 eml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~-l~r~~lvVvl~~~i~vy~~~ 98 (109)
-|=..+++||+=. .+.|.|+|-.+++.+....|+++|.==| ++.+.|.+|+++.||-|++.
T Consensus 72 IMnP~~~iiALra--------g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT~~aVyHW~~~ 133 (1630)
T 1xi4_A 72 IMNPASKVIALKA--------GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSME 133 (1630)
T ss_pred ccCCCcceEEEec--------CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEcCCeEEEeccC
Confidence 3455778888864 3789999999999999999999987666 47788999999999999995
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.47 E-value=29 Score=23.88 Aligned_cols=46 Identities=2% Similarity=-0.106 Sum_probs=38.0
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEec-CC--EEEEEeCCeEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLR-RD--KIVVVLEGLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~-r~--~lvVvl~~~i~vy~~~ 98 (109)
+.|.+||.. ++.+..+..+..+.++.+. .+ .|.|...+.++-++..
T Consensus 237 ~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~ 285 (296)
T 3e5z_A 237 DGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETN 285 (296)
T ss_dssp TEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECS
T ss_pred CeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEcc
Confidence 578999986 7788888888778888883 44 7999999998888886
No 181
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=66.21 E-value=31 Score=24.15 Aligned_cols=50 Identities=8% Similarity=0.051 Sum_probs=32.6
Q ss_pred EEEEEcCCccEEEEEcCCCCCCCCCceEEEE--eCCCCcEE---EEEEccCceeEEEecCC
Q psy3712 27 GHVEMLFRCNYLALVGGGTHPKYPNNRVMIW--DDLKKQVV---ICLEFNAPVKGVRLRRD 82 (109)
Q Consensus 27 ~~veml~~tn~ialVg~g~~p~~~~n~v~Iw--Dd~~~~~i---~el~f~s~V~~V~l~r~ 82 (109)
.-+..-...+.++..+.+ .+.+.+| |..+++.. ..++.|++.--.+|...
T Consensus 289 ~~~~~spdg~~l~v~~~~------~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~~~~~~~ 343 (347)
T 3hfq_A 289 RDFDLDPTEAFVVVVNQN------TDNATLYARDLTSGKLSLLQKDVTVPEGVCVRFLEHH 343 (347)
T ss_dssp CEEEECTTSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEEECTTEEEEEECC--
T ss_pred CeEEECCCCCEEEEEEcC------CCcEEEEEEeCCCCeEEecccceecCCCcEEEehhhc
Confidence 344455556667665543 3679999 77777755 46788998888877653
No 182
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=65.40 E-value=60 Score=27.18 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=50.6
Q ss_pred CCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEE-EccCceeEEEecCC--EEEEEeC-----------
Q psy3712 24 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICL-EFNAPVKGVRLRRD--KIVVVLE----------- 89 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el-~f~s~V~~V~l~r~--~lvVvl~----------- 89 (109)
+.+..+..-.....+|..+. .+.+.+||..+++....+ .-..+|.++.++.| +|+....
T Consensus 379 ~~~~~~~~SpDG~~la~~~~-------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~ 451 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAND-------RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 451 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred cceeeeEECCCCCEEEEECC-------CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCC
Confidence 45666777777888887653 358999999999877666 34557889999876 5655543
Q ss_pred CeEEEEEcCC
Q psy3712 90 GLIKVYTFIQ 99 (109)
Q Consensus 90 ~~i~vy~~~~ 99 (109)
..|++|+...
T Consensus 452 ~~i~l~d~~~ 461 (1045)
T 1k32_A 452 QAIHVYDMEG 461 (1045)
T ss_dssp EEEEEEETTT
T ss_pred CeEEEEECCC
Confidence 3899999973
No 183
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.60 E-value=33 Score=23.95 Aligned_cols=45 Identities=7% Similarity=0.159 Sum_probs=36.8
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEe--cCCEEEEEeCCeEEEEEc
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRL--RRDKIVVVLEGLIKVYTF 97 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l--~r~~lvVvl~~~i~vy~~ 97 (109)
+.|.+||. +++.+..+..+..+.++.+ ..+.|.|...+.++-+++
T Consensus 258 ~gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~~ 304 (305)
T 3dr2_A 258 TGVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLPL 304 (305)
T ss_dssp SEEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEEEC
T ss_pred CcEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEEEC
Confidence 46889998 6788889999988899999 456799999998877764
No 184
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=64.51 E-value=25 Score=27.99 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=42.2
Q ss_pred CCceEEEEeCCCCcEEEEEEccC-c-eeE--E--EecCCEEEEEe--------------------CCeEEEEEcCCCCEE
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNA-P-VKG--V--RLRRDKIVVVL--------------------EGLIKVYTFIQCPQQ 103 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s-~-V~~--V--~l~r~~lvVvl--------------------~~~i~vy~~~~~~~l 103 (109)
.++.+.++|.++.+.+.+++-.. + -.+ + .-.++.+++.- .++|++|++.. .++
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~ 240 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKR 240 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEE
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcE
Confidence 46889999999999999987552 2 122 4 44677777774 69999999984 677
Q ss_pred eEEe
Q psy3712 104 LHIY 107 (109)
Q Consensus 104 l~~~ 107 (109)
+.++
T Consensus 241 ~~tI 244 (462)
T 2ece_A 241 IHSL 244 (462)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 7664
No 185
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=64.03 E-value=22 Score=27.91 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=35.2
Q ss_pred CCceEEEEeCCCCcEEE----EEEc-cCceeEEEecCC--------EEEEEeC-CeEEEEEcCC
Q psy3712 50 PNNRVMIWDDLKKQVVI----CLEF-NAPVKGVRLRRD--------KIVVVLE-GLIKVYTFIQ 99 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~----el~f-~s~V~~V~l~r~--------~lvVvl~-~~i~vy~~~~ 99 (109)
..+.++|||..+++... .+.. ...|.+|..+++ .|+.+.. ..|.+|++..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~ 244 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIID 244 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCC
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCC
Confidence 45689999987776422 2333 367999999874 6665554 5899999974
No 186
>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1
Probab=62.85 E-value=7.4 Score=18.85 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=12.7
Q ss_pred CCCceEEEEeCCCCc
Q psy3712 49 YPNNRVMIWDDLKKQ 63 (109)
Q Consensus 49 ~~~n~v~IwDd~~~~ 63 (109)
|.++.|.||.|..+.
T Consensus 2 f~~~RVrvfvd~~g~ 16 (26)
T 1hym_B 2 FRCNRVRIWVNKRGL 16 (26)
T ss_dssp CCTTEEEEEEETTTE
T ss_pred CCCCEEEEEECCCCc
Confidence 678999999998765
No 187
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=60.57 E-value=15 Score=29.04 Aligned_cols=73 Identities=14% Similarity=0.070 Sum_probs=49.9
Q ss_pred EEEEEEcCCccEEEEEcCCCC-CCC-CCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEEEcC
Q psy3712 26 LGHVEMLFRCNYLALVGGGTH-PKY-PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFI 98 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~-p~~-~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~ 98 (109)
+.-+..-.+.+.||+.+.... -.+ ....+.+||..+++.+.....+..+.++.++.| +|+.+-++.|+++++.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~ 138 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRP 138 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESST
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCC
Confidence 555566667778887754110 000 135799999998876321233577888999876 7888889999999986
No 188
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=58.20 E-value=44 Score=28.00 Aligned_cols=73 Identities=14% Similarity=0.098 Sum_probs=49.0
Q ss_pred CCEEEEEEcCCccEEEEEcC-CC-----CCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEE
Q psy3712 24 GGLGHVEMLFRCNYLALVGG-GT-----HPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVY 95 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~-g~-----~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy 95 (109)
+.+..+..-....+++.++. |. .+.-.+.++.+||.++++.. .+. +.+.++.+++| +|++..++.|+++
T Consensus 557 ~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~--~~v~~~~~S~DG~~l~~~~~~~i~~~ 633 (1045)
T 1k32_A 557 GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-EVK--NNLTDLRLSADRKTVMVRKDDGKIYT 633 (1045)
T ss_dssp BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-EEE--EEEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE-Eee--cCcceEEECCCCCEEEEEcCCcEEEE
Confidence 45555565555555554321 00 12224678999999988743 332 77888999876 8899999999999
Q ss_pred EcCC
Q psy3712 96 TFIQ 99 (109)
Q Consensus 96 ~~~~ 99 (109)
+...
T Consensus 634 d~~~ 637 (1045)
T 1k32_A 634 FPLE 637 (1045)
T ss_dssp EESS
T ss_pred eCcc
Confidence 9974
No 189
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=56.39 E-value=49 Score=23.27 Aligned_cols=68 Identities=9% Similarity=0.104 Sum_probs=43.6
Q ss_pred CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcE--EEEEEcc----CceeEEEecCC--EEEEEeC---CeEE
Q psy3712 25 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQV--VICLEFN----APVKGVRLRRD--KIVVVLE---GLIK 93 (109)
Q Consensus 25 ~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~--i~el~f~----s~V~~V~l~r~--~lvVvl~---~~i~ 93 (109)
+...+..-...+++++++.+ .+.|.+||..+++. +.++... ....++.++.+ +|++.-. +.|.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~ 285 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEI------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVA 285 (361)
T ss_dssp CEEEEEECTTSSEEEEEETT------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEE
T ss_pred CCeEEEEcCCCCEEEEEcCC------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEE
Confidence 45555665666677666532 36899999887654 3333322 12568888765 5666653 5899
Q ss_pred EEEcC
Q psy3712 94 VYTFI 98 (109)
Q Consensus 94 vy~~~ 98 (109)
||++.
T Consensus 286 v~~~~ 290 (361)
T 3scy_A 286 IFKVD 290 (361)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99995
No 190
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=56.18 E-value=36 Score=23.96 Aligned_cols=31 Identities=6% Similarity=0.230 Sum_probs=21.4
Q ss_pred CCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC
Q psy3712 33 FRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA 72 (109)
Q Consensus 33 ~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s 72 (109)
+..+.+.++|| +.+.+||..+++=.. ...|.
T Consensus 2 ~~~~~l~~~GG--------~~~~~yd~~~~~W~~-~~~~~ 32 (315)
T 4asc_A 2 FLQDLIFMISE--------EGAVAYDPAANECYC-ASLSS 32 (315)
T ss_dssp CCEEEEEEEET--------TEEEEEETTTTEEEE-EECCC
T ss_pred ccceEEEEEcC--------CceEEECCCCCeEec-CCCCC
Confidence 34466777887 579999999988543 44443
No 191
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.90 E-value=53 Score=22.83 Aligned_cols=28 Identities=21% Similarity=0.438 Sum_probs=19.2
Q ss_pred cEEEEEcCCCCCCCCCceEEEEeCCCCcEE
Q psy3712 36 NYLALVGGGTHPKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 36 n~ialVg~g~~p~~~~n~v~IwDd~~~~~i 65 (109)
+.+-++||.. ....+.+.+||..+++-.
T Consensus 56 ~~lyv~GG~~--~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 56 NVVYILGGSQ--LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp TEEEEECCBS--SSBCCEEEEEETTTTEEE
T ss_pred CEEEEEeCCC--CCCcceEEEEeCCCCeEE
Confidence 4455666543 446688999999988644
No 192
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=52.36 E-value=64 Score=23.33 Aligned_cols=57 Identities=7% Similarity=-0.088 Sum_probs=43.7
Q ss_pred CCceEEEEeCCCCcEEEEEEcc-CceeEEEecCCEEEEEeC-CeEEEEEcCCCCEEeEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFN-APVKGVRLRRDKIVVVLE-GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~-s~V~~V~l~r~~lvVvl~-~~i~vy~~~~~~~ll~~~ 107 (109)
-.+.+.++|..+.+.+.++.++ ..=.++.-..++++|.-. +++++.+-. +.+.+.++
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~-t~~v~~~I 142 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPH-TFKLIKKH 142 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTT-TCCEEEEE
T ss_pred cCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECC-CCcEEEEE
Confidence 4688999999999999999987 444555556778887765 788888876 56666654
No 193
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=51.20 E-value=43 Score=23.25 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=19.6
Q ss_pred ccEEEEEcCCCCCCCCCceEEEEeCCCCcEE
Q psy3712 35 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 35 tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i 65 (109)
-+.+-++||.. ..-..+.+.+||..+++-.
T Consensus 61 ~~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 61 AGLVFAVGGFN-GSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp TTEEEEESCBC-SSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcC-CCccccceEEECCCCCcee
Confidence 34565666643 3335678999999987643
No 194
>3chb_D Cholera toxin; toxin/receptor complex, pentasaccharide; HET: GAL NGA SIA BGC MES; 1.25A {Vibrio cholerae} SCOP: b.40.2.1 PDB: 2chb_D* 1jr0_D* 1fgb_D 1eei_D* 1llr_D* 1md2_D* 1pzj_D* 1pzk_D* 1rcv_D* 1rd9_D* 1rdp_D* 1rf2_D* 1s5b_D 1s5c_D 1s5d_D* 1s5e_D* 1s5f_D* 1chp_D 1chq_D 1ct1_D* ...
Probab=50.71 E-value=13 Score=23.19 Aligned_cols=20 Identities=5% Similarity=0.539 Sum_probs=16.6
Q ss_pred ceEEEEeCCCCcEEEEEEcc
Q psy3712 52 NRVMIWDDLKKQVVICLEFN 71 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~ 71 (109)
.|+++|+.++-..|+.++..
T Consensus 84 ~klcvwnnktpnsiaai~~~ 103 (104)
T 3chb_D 84 EKLCVWNNKTPRAIAAISMA 103 (104)
T ss_dssp EEEEEETTSSSEEEEEEEEE
T ss_pred hheeeecCCCCcceeeeecc
Confidence 46999999999988877753
No 195
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=49.56 E-value=31 Score=27.01 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=37.0
Q ss_pred ceEEEEeCCCCcEEEEEEccC----ceeEEEecCC--EEEEEeC----------CeEEEEEcCC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNA----PVKGVRLRRD--KIVVVLE----------GLIKVYTFIQ 99 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s----~V~~V~l~r~--~lvVvl~----------~~i~vy~~~~ 99 (109)
..+.+||..+++....+.-.. .|.++.++.| +|+.+.. ..+++|++.+
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 479999999988776665544 3899999876 6777765 6789999873
No 196
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.97 E-value=17 Score=28.04 Aligned_cols=50 Identities=14% Similarity=0.288 Sum_probs=36.1
Q ss_pred CCceEEEEeCCCC--cEEEEEEccCce-------eEEEec--C------CEEEEEeC---CeEEEEEcCC
Q psy3712 50 PNNRVMIWDDLKK--QVVICLEFNAPV-------KGVRLR--R------DKIVVVLE---GLIKVYTFIQ 99 (109)
Q Consensus 50 ~~n~v~IwDd~~~--~~i~el~f~s~V-------~~V~l~--r------~~lvVvl~---~~i~vy~~~~ 99 (109)
.+-||.+||-+++ +.+..+.||.++ -++++. + +-.+-+.+ .-|-||++.+
T Consensus 121 ~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~ 190 (381)
T 3q6k_A 121 HRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK 190 (381)
T ss_dssp CCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC
Confidence 4668999999999 999999998654 445554 1 34444443 5688888874
No 197
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=48.30 E-value=52 Score=23.09 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=18.8
Q ss_pred EEEEEcCCCCCCCCCceEEEEeCCCCcE
Q psy3712 37 YLALVGGGTHPKYPNNRVMIWDDLKKQV 64 (109)
Q Consensus 37 ~ialVg~g~~p~~~~n~v~IwDd~~~~~ 64 (109)
-+-++||-....-..+.+.+||..+++=
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 3545665434444568899999998753
No 198
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=46.96 E-value=39 Score=20.14 Aligned_cols=22 Identities=27% Similarity=0.554 Sum_probs=21.2
Q ss_pred EEecCCEEEEEeCCeEEEEEcC
Q psy3712 77 VRLRRDKIVVVLEGLIKVYTFI 98 (109)
Q Consensus 77 V~l~r~~lvVvl~~~i~vy~~~ 98 (109)
+.|..+++.|+-.+.|.||.|.
T Consensus 25 vqLe~nhFgv~e~g~iKIykyd 46 (72)
T 3kvp_A 25 FPLEHNHFGVMEDGYIKIYEYN 46 (72)
T ss_dssp EECSTTEEEEEETTEEEEEEEE
T ss_pred eeecCCEEEEEeCCEEEEEEeC
Confidence 9999999999999999999997
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=46.01 E-value=77 Score=22.44 Aligned_cols=46 Identities=2% Similarity=-0.149 Sum_probs=36.1
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEec-CCEEEEEeCCeEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLR-RDKIVVVLEGLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~-r~~lvVvl~~~i~vy~~~ 98 (109)
+.|..||..+++. ..+.++..+.++... .++++|+..+.|++|+..
T Consensus 71 ~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~ 117 (326)
T 2ghs_A 71 RELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTA 117 (326)
T ss_dssp TEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETT
T ss_pred CEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECC
Confidence 5788899887654 456778888888775 467888889999999975
No 200
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=45.45 E-value=77 Score=22.31 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=39.5
Q ss_pred CceEEEEeCCCCcEEEEEEc---cCceeEEEecCCEEEEEeC---------CeEEEEEcCCCCEEeEEe
Q psy3712 51 NNRVMIWDDLKKQVVICLEF---NAPVKGVRLRRDKIVVVLE---------GLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f---~s~V~~V~l~r~~lvVvl~---------~~i~vy~~~~~~~ll~~~ 107 (109)
.++|.+||..+++.+..+.. ...+.++......+++.-. .+|++|+..+ -+.+.++
T Consensus 217 ~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~ 284 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVF 284 (329)
T ss_dssp TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEE
Confidence 46899999988998888854 3568888888855555533 2788888773 4555543
No 201
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=45.39 E-value=55 Score=21.96 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.4
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEEeCCe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGL 91 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVvl~~~ 91 (109)
+++-+.++|.+++..+..+.| +.|.++..+++.+.+.+.+.
T Consensus 139 ~~~Gi~~~~~~~~~~l~~~~~-~~I~~~~~~~~~f~i~~~~~ 179 (206)
T 1mix_A 139 TKECVMRVDEKTKEVIQEWSL-TNIKRWAASPKSFTLDFGDY 179 (206)
T ss_dssp CSSEEEEEETTTCCEEEEEEG-GGCCEEEECSSEEEEECGGG
T ss_pred cccceEEeCCCCCceeeeeeh-hHeeecccCCCEEEEEeCcc
Confidence 346799999999988777777 56889999999988877754
No 202
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=45.31 E-value=52 Score=22.75 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=18.4
Q ss_pred cEEEEEcCCCCCCCCCceEEEEeCCCCc
Q psy3712 36 NYLALVGGGTHPKYPNNRVMIWDDLKKQ 63 (109)
Q Consensus 36 n~ialVg~g~~p~~~~n~v~IwDd~~~~ 63 (109)
+.+.++||.. ..-..+.+.+||..+++
T Consensus 63 ~~l~v~GG~~-~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 63 DRIYVIGGYD-GRSRLSSVECLDYTADE 89 (301)
T ss_dssp TEEEEECCBC-SSCBCCCEEEEETTCCT
T ss_pred CEEEEEcCCC-CCccCceEEEEECCCCC
Confidence 4565666643 33356789999998876
No 203
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=44.52 E-value=58 Score=22.87 Aligned_cols=63 Identities=24% Similarity=0.363 Sum_probs=32.5
Q ss_pred cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCcee--EEEecCCEEEEEe-------CCeEEEEEcC
Q psy3712 36 NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVK--GVRLRRDKIVVVL-------EGLIKVYTFI 98 (109)
Q Consensus 36 n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~--~V~l~r~~lvVvl-------~~~i~vy~~~ 98 (109)
+.|-++||-....-..+.+.+||..+++-..-=..|.+-. +.-.-.++|.|+= .+.+++|+..
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 230 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK 230 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETT
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECC
Confidence 4455666543333346789999999876332212333211 2222344555542 2456666665
No 204
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=44.33 E-value=75 Score=25.23 Aligned_cols=26 Identities=4% Similarity=0.049 Sum_probs=23.3
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeE
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKG 76 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~ 76 (109)
...+..||.++++.+-++..++.+.+
T Consensus 506 dg~l~A~D~~tG~~lW~~~~~~g~~a 531 (582)
T 1flg_A 506 DGYFKAFDAKSGKELWKFQTGSGIVS 531 (582)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCcEEEEECCCCCEEEEecCCCCccc
Confidence 47899999999999999999988765
No 205
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=44.07 E-value=36 Score=26.76 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=36.6
Q ss_pred ceEEEEeCCCCcEEEEEEccCc----eeEEEecCC--EEEEEeC----------CeEEEEEcCC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAP----VKGVRLRRD--KIVVVLE----------GLIKVYTFIQ 99 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~----V~~V~l~r~--~lvVvl~----------~~i~vy~~~~ 99 (109)
..+.+||..+++...-+..... |.++.++.| +|+.+.. ..|+++++..
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 4799999999987665555443 889999876 6666654 6899999873
No 206
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=43.95 E-value=69 Score=24.45 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=40.0
Q ss_pred CCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEc-c-CceeEEEecCCEEEEEeC
Q psy3712 24 GGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEF-N-APVKGVRLRRDKIVVVLE 89 (109)
Q Consensus 24 g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f-~-s~V~~V~l~r~~lvVvl~ 89 (109)
.++-.+..-.+-..||+++.. ...+.||+...++. ..++. + ..|.++..+.|+++....
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~------~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd~~l~~~~ 82 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFS------EGSVNAYLYDGGET-VKLNREPINSVLDPHYGVGRVILVRD 82 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEE------TTEEEEEEEETTEE-EECCSSCCSEECEECTTCSEEEEEEE
T ss_pred cchheeecCCCCCeEEEEEcc------CCceeEEEEcCCCc-EeeecccccccccccCCCCeEEEEec
Confidence 356666666677788888742 24689999755544 44544 4 379999999998777554
No 207
>1ltr_D ETB-R2, heat-labIle enterotoxin; B subunit, anti-HSV; 3.04A {Escherichia coli} SCOP: b.40.2.1
Probab=42.36 E-value=21 Score=22.57 Aligned_cols=20 Identities=5% Similarity=0.549 Sum_probs=16.6
Q ss_pred ceEEEEeCCCCcEEEEEEcc
Q psy3712 52 NRVMIWDDLKKQVVICLEFN 71 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~ 71 (109)
.|+++|+.++-..|+.++..
T Consensus 83 ~klcvwnnktpnsiaai~~~ 102 (113)
T 1ltr_D 83 DKLCVWNNKTPNSIAAISME 102 (113)
T ss_dssp EEEEEETTSSSEEEEEEEEE
T ss_pred hheeeecCCCCchhhHhhHH
Confidence 46999999999888877764
No 208
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=41.97 E-value=92 Score=24.71 Aligned_cols=48 Identities=19% Similarity=0.269 Sum_probs=35.0
Q ss_pred CceEEEEeCCCCcEEEEEEcc---CceeEEEe--cCC--EEEEE-------eCCeEEEEEcC
Q psy3712 51 NNRVMIWDDLKKQVVICLEFN---APVKGVRL--RRD--KIVVV-------LEGLIKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~---s~V~~V~l--~r~--~lvVv-------l~~~i~vy~~~ 98 (109)
.++|.+||..+++.+.++... +.-+.|++ +.+ +..|+ |.++|.+|...
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 589999999999999999997 35677777 533 44443 55688776543
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=41.62 E-value=78 Score=21.91 Aligned_cols=38 Identities=11% Similarity=0.193 Sum_probs=31.4
Q ss_pred ceEEEEeCCCCcEEEEEEcc-CceeEEEec-C--CEEEEEeC
Q psy3712 52 NRVMIWDDLKKQVVICLEFN-APVKGVRLR-R--DKIVVVLE 89 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~-s~V~~V~l~-r--~~lvVvl~ 89 (109)
+.|..||..+++.+.++..+ ..+.++.+. . +.|.|...
T Consensus 220 ~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 57999999999999999998 579999996 3 47777664
No 210
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=41.50 E-value=75 Score=24.29 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=34.7
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEecCCE--------EEEEeC-----CeEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRDK--------IVVVLE-----GLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~--------lvVvl~-----~~i~vy~~~ 98 (109)
.-|.+||. +++.+..+.. ..+-+|-++.+. ++++.+ +++.+|++.
T Consensus 50 ~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp TEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred CCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 36999999 9999988865 567777777765 566654 579999994
No 211
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=41.42 E-value=75 Score=21.94 Aligned_cols=29 Identities=28% Similarity=0.373 Sum_probs=19.2
Q ss_pred cEEEEEcCCCCCCCCCceEEEEeCCCCcEE
Q psy3712 36 NYLALVGGGTHPKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 36 n~ialVg~g~~p~~~~n~v~IwDd~~~~~i 65 (109)
+.|-++||-..+ ...+.+.+||..+++-.
T Consensus 205 ~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 205 NLLYAVGGHDGP-LVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp TEEEEECCBSSS-SBCCCEEEEETTTTEEE
T ss_pred CEEEEECCCCCC-cccceEEEEeCCCCCEe
Confidence 456566764433 34578999999887643
No 212
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=41.27 E-value=85 Score=21.60 Aligned_cols=62 Identities=11% Similarity=0.129 Sum_probs=33.2
Q ss_pred cEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCcee--EEEecCCEEEEE-------eCCeEEEEEcC
Q psy3712 36 NYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVK--GVRLRRDKIVVV-------LEGLIKVYTFI 98 (109)
Q Consensus 36 n~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~--~V~l~r~~lvVv-------l~~~i~vy~~~ 98 (109)
+.+-++||... .-..+.+.+||..+++-..-=..|.+-. +.-.-.++|.|+ ..+.+++|+..
T Consensus 113 ~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~ 183 (301)
T 2vpj_A 113 DMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPH 183 (301)
T ss_dssp TEEEEECCBCS-SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT
T ss_pred CEEEEEcccCC-CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCC
Confidence 55656665433 3346789999998876443223343311 122224555554 23566677764
No 213
>1b44_D ETB-POL, protein (B-POL subunit of heat-labIle enterotoxin); B subunit, heat-labIle enterotoxin anti-HSV; 3.30A {Escherichia coli} SCOP: b.40.2.1
Probab=40.75 E-value=22 Score=22.92 Aligned_cols=20 Identities=5% Similarity=0.549 Sum_probs=16.6
Q ss_pred ceEEEEeCCCCcEEEEEEcc
Q psy3712 52 NRVMIWDDLKKQVVICLEFN 71 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~ 71 (109)
.|+++|+.++-..|+.++..
T Consensus 83 ~klcvwnnktpnsiaai~~~ 102 (129)
T 1b44_D 83 DKLCVWNNKTPNSIAAISME 102 (129)
T ss_dssp EEEEEETTSSSEEEEEEEEE
T ss_pred hheeeecCCCCchhhhhhhh
Confidence 35999999999888877764
No 214
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=39.56 E-value=93 Score=25.47 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=33.9
Q ss_pred cCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC
Q psy3712 32 LFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA 72 (109)
Q Consensus 32 l~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s 72 (109)
+..-..+|++|+|-++.-....|.|.|..++..+.+++.+.
T Consensus 203 ~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~ 243 (570)
T 3hx6_A 203 LHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTG 243 (570)
T ss_dssp CTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECC
T ss_pred ecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCC
Confidence 34567999999997766567889999999999999888653
No 215
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=39.53 E-value=65 Score=27.19 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=30.8
Q ss_pred CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC
Q psy3712 25 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA 72 (109)
Q Consensus 25 ~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s 72 (109)
+-.+..+.+..+++..+.. .++++|||.++++.+.+...+.
T Consensus 221 ~~~Is~~~~~~~fLftL~~-------Dh~LRiWsL~t~~lv~t~DL~~ 261 (729)
T 3f7f_A 221 DSVISCKLFHERYLIVLTQ-------NCHLKIWDLTSFTLIQDYDMVS 261 (729)
T ss_dssp CCEEEEEEETTTEEEEEET-------TCEEEEEETTTTEEEEEEETTT
T ss_pred CceEEEeccCCcEEEEEEc-------CCeEEEEEcCCCceEEeecccc
Confidence 3344455566777777764 4789999999999999999843
No 216
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=37.49 E-value=1e+02 Score=21.30 Aligned_cols=60 Identities=12% Similarity=0.088 Sum_probs=38.2
Q ss_pred EEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEe
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVL 88 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl 88 (109)
+..+..-...+.+|+++..... ....|.+||..+++...-...+. +.++..+.+ +|+.+.
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~--~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEK--KVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTT--TEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEE
T ss_pred CCCeEECCCCCEEEEEEeccCC--CcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEE
Confidence 3344555567778877642110 13458899988887665555566 889999754 566665
No 217
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=37.28 E-value=1.4e+02 Score=23.10 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=39.3
Q ss_pred CCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEE-eCC---eEEEEEc
Q psy3712 23 DGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVV-LEG---LIKVYTF 97 (109)
Q Consensus 23 ~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVv-l~~---~i~vy~~ 97 (109)
.+++.-+..-.+.+.+|+.+.+.. .|..+.+||..+++ ...++-..++.+..+.....+-+ ..+ +++.+-+
T Consensus 400 ~~~~~~~~~spdg~~l~~~~~~~~---~p~~i~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 474 (706)
T 2z3z_A 400 ESGMHRTQLSPDGSAIIDIFQSPT---VPRKVTVTNIGKGS-HTLLEAKNPDTGYAMPEIRTGTIMAADGQTPLYYKLT 474 (706)
T ss_dssp SSSEEEEEECTTSSEEEEEEECSS---CSCEEEEEESSSCE-EEEEECC------CCCCEEEEEEECTTSSSEEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEecCCC---CCcEEEEEECCCCe-EeeccccchhhhcCCCCcEEEEEEcCCCCEEEEEEEE
Confidence 456666777777788887754332 45789999998887 44455455565555544433333 322 4555544
No 218
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=36.78 E-value=47 Score=19.66 Aligned_cols=20 Identities=20% Similarity=0.418 Sum_probs=16.6
Q ss_pred CceEEEEeCCCCcEEEEEEc
Q psy3712 51 NNRVMIWDDLKKQVVICLEF 70 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f 70 (109)
|.+++.|-|++|++..|=+|
T Consensus 2 p~k~RtWtDrtG~F~VeA~f 21 (68)
T 2hbp_A 2 SKKSRLWVDRSGTFKVDAEF 21 (68)
T ss_dssp -CCSEEEEBSSSCCEEEEEE
T ss_pred CccccEEEcCCCCeEEEEEE
Confidence 56789999999998887776
No 219
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=35.87 E-value=1.1e+02 Score=21.36 Aligned_cols=94 Identities=12% Similarity=0.031 Sum_probs=52.5
Q ss_pred CcceEEEeecCCceeee--eecCCCCEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCCC--Cc--EEEEEE-ccCce
Q psy3712 2 EDGFRIYNCDPLKEKER--QDFTDGGLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDLK--KQ--VVICLE-FNAPV 74 (109)
Q Consensus 2 ~~Gf~Iy~~~P~~~~~~--~~~~~g~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~~--~~--~i~el~-f~s~V 74 (109)
..|..+|..++-.-... .....+....+..-...++++.++.... ....+.+|+... ++ .+.+.. -....
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 35778888876422211 1111223333444455566666654311 236788887544 43 333433 23356
Q ss_pred eEEEecCCEEEEEe--CCeEEEEEcC
Q psy3712 75 KGVRLRRDKIVVVL--EGLIKVYTFI 98 (109)
Q Consensus 75 ~~V~l~r~~lvVvl--~~~i~vy~~~ 98 (109)
..+.+..++++++- ++.|.+|++.
T Consensus 103 ~~~~~dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 103 CYLTTNGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEBC
T ss_pred EEEEECCCEEEEEECCCCEEEEEEeC
Confidence 66666777788875 4689999986
No 220
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=35.50 E-value=81 Score=22.02 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=17.6
Q ss_pred EEEEEcCCCCCCCCCceEEEEeCCCCcEE
Q psy3712 37 YLALVGGGTHPKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 37 ~ialVg~g~~p~~~~n~v~IwDd~~~~~i 65 (109)
.|.++||- + .-..+.+.+||..+++-.
T Consensus 26 ~i~v~GG~-~-~~~~~~~~~~d~~~~~W~ 52 (308)
T 1zgk_A 26 LIYTAGGY-F-RQSLSYLEAYNPSNGTWL 52 (308)
T ss_dssp CEEEECCB-S-SSBCCCEEEEETTTTEEE
T ss_pred EEEEEeCc-C-CCCcceEEEEcCCCCeEe
Confidence 34466663 2 224578999999988744
No 221
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=34.50 E-value=38 Score=23.18 Aligned_cols=29 Identities=7% Similarity=0.154 Sum_probs=24.0
Q ss_pred cCCEEEEEeC---CeEEEEEcCCCCEEeEEec
Q psy3712 80 RRDKIVVVLE---GLIKVYTFIQCPQQLHIYL 108 (109)
Q Consensus 80 ~r~~lvVvl~---~~i~vy~~~~~~~ll~~~~ 108 (109)
..+|+=|.|+ ..|..|+..+.+.+||+|.
T Consensus 127 ~p~rVGVfLDye~G~lSFYnv~d~~~lI~tF~ 158 (186)
T 3uv9_A 127 CPDRVGVFVDYEACTVSFFNITNHGFLIYKFS 158 (186)
T ss_dssp CCSEEEEEEETTTTEEEEEETTTTTEEEEEEC
T ss_pred cCCEEEEEeecCCCEEEEEeCCCCceEEEEeC
Confidence 4578889888 7999999987788999873
No 222
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=34.42 E-value=58 Score=22.86 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=18.9
Q ss_pred cEEEEEcCCCC-CCCCCceEEEEeCCCCcEE
Q psy3712 36 NYLALVGGGTH-PKYPNNRVMIWDDLKKQVV 65 (109)
Q Consensus 36 n~ialVg~g~~-p~~~~n~v~IwDd~~~~~i 65 (109)
+.+-++||... ..-..+.+.+||..+++-.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 140 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWS 140 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEe
Confidence 45556665431 2334578999999987644
No 223
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=33.73 E-value=95 Score=21.63 Aligned_cols=63 Identities=16% Similarity=0.072 Sum_probs=32.8
Q ss_pred ccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccCce--eEEEecCCEEEEEe-------CCeEEEEEcC
Q psy3712 35 CNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNAPV--KGVRLRRDKIVVVL-------EGLIKVYTFI 98 (109)
Q Consensus 35 tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s~V--~~V~l~r~~lvVvl-------~~~i~vy~~~ 98 (109)
.+.+-++||-.. .-..+.+.+||..+++-...=..|.+- -+.-.-.++|.|+= .+.+++|++.
T Consensus 168 ~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 168 NRLLYAVGGFDG-TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp TTEEEEECCBCS-SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCEEEEEeCCCC-CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCC
Confidence 355656665432 223688999999887643221223221 11122245555553 2567777765
No 224
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=32.60 E-value=1.2e+02 Score=20.81 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=33.7
Q ss_pred ceEEEEeCCCCcEEEEE-EccCceeEEEecCC-EEEEEeC-C-----eEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICL-EFNAPVKGVRLRRD-KIVVVLE-G-----LIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el-~f~s~V~~V~l~r~-~lvVvl~-~-----~i~vy~~~ 98 (109)
+.|.+||..+++...-. .....+.++.++++ ++.|+.. + .|++|+..
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 57999999888765433 23567999999754 5666654 3 79998876
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=32.53 E-value=1.2e+02 Score=24.34 Aligned_cols=30 Identities=7% Similarity=0.047 Sum_probs=24.1
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRL 79 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l 79 (109)
....+.+||.++++.+-++..++.+.+.-+
T Consensus 496 ~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ 525 (677)
T 1kb0_A 496 ADGRLVAYHAATGEKLWEAPTGTGVVAAPS 525 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred CCCcEEEEECCCCceeeeeeCCCCcccCCE
Confidence 357899999999999999999885554433
No 226
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=31.22 E-value=1.3e+02 Score=20.62 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=33.3
Q ss_pred CCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEEEEeCCe
Q psy3712 50 PNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIVVVLEGL 91 (109)
Q Consensus 50 ~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lvVvl~~~ 91 (109)
+++-|.++|.+++..+....| +.|.++..+++.+.+.+.+.
T Consensus 150 ~~~GI~v~~~~tk~~l~~~~~-~~I~~~~~~~~~f~I~~~~~ 190 (222)
T 4f7g_A 150 TKECVMRVDEKTKEVIQEWSL-TNIKRWAASPKSFTLDFGDY 190 (222)
T ss_dssp CSSEEEEECTTTCCEEEEEEG-GGCCEEEECSSEEEEECCTT
T ss_pred cCCcEEEEcCCCCceeEeccH-HHeeeeccCCCEEEEEECCc
Confidence 456799999999988877776 45888889999998888764
No 227
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=31.17 E-value=50 Score=26.44 Aligned_cols=47 Identities=19% Similarity=0.036 Sum_probs=37.2
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEecCC--EEEEEeCCeEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLRRD--KIVVVLEGLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~--~lvVvl~~~i~vy~~~ 98 (109)
..+.+||..+++...-...+..+..+..+.| +|+.+.++.|++++..
T Consensus 92 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~ 140 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140 (740)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESST
T ss_pred eEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECC
Confidence 3578999999885532234667999999985 7999999999999986
No 228
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=30.32 E-value=1.5e+02 Score=21.06 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=45.0
Q ss_pred CEEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCC-CCcE--EEEEEcc---CceeEEEecCC--EEEEEeC--CeEEE
Q psy3712 25 GLGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL-KKQV--VICLEFN---APVKGVRLRRD--KIVVVLE--GLIKV 94 (109)
Q Consensus 25 ~v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~-~~~~--i~el~f~---s~V~~V~l~r~--~lvVvl~--~~i~v 94 (109)
...-+..-...+.++....| .+.|.+||.. +++. +.++.++ ..+.++.++++ +++++.+ +.|.+
T Consensus 146 ~~~~~~~spdG~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 219 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLT------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICE 219 (365)
T ss_dssp CEEEEEECTTSSEEEEEETT------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cceEEEECCCCCEEEEEcCC------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEE
Confidence 34445555555666554433 3689999987 6664 3456653 45888999876 6777764 68999
Q ss_pred EEcC
Q psy3712 95 YTFI 98 (109)
Q Consensus 95 y~~~ 98 (109)
|++.
T Consensus 220 ~~~~ 223 (365)
T 1jof_A 220 YVID 223 (365)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9875
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=27.50 E-value=76 Score=23.16 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=29.4
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEec-CCEEEEE--eCCeEEEEEcC
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRLR-RDKIVVV--LEGLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l~-r~~lvVv--l~~~i~vy~~~ 98 (109)
..|..||.++++.+-+++. .++.+.-.. .+.++++ .+..++.++..
T Consensus 19 g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred CEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 5799999999999988887 555544333 3445554 46788888874
No 230
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=27.46 E-value=1.6e+02 Score=21.17 Aligned_cols=47 Identities=6% Similarity=0.123 Sum_probs=35.2
Q ss_pred CceEEEEeCCCCc-EEEEEEccCceeEEEecCCEEEEEeCCe---EEEEEcC
Q psy3712 51 NNRVMIWDDLKKQ-VVICLEFNAPVKGVRLRRDKIVVVLEGL---IKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~-~i~el~f~s~V~~V~l~r~~lvVvl~~~---i~vy~~~ 98 (109)
++-|.|+|..++. ....+.+ +.|.++..+++.+.+.+.+. .++|..+
T Consensus 239 ~~Gi~v~~~~~k~~~~~~f~w-~~I~~~~~~~~~f~i~~~~~~~~~~~f~~~ 289 (314)
T 1h4r_A 239 ALGLHIYDPENRLTPKISFPW-NEIRNISYSDKEFTIKPLDKKIDVFKFNSS 289 (314)
T ss_dssp SSEEEEECTTCSSSCSEEEEG-GGEEEEEEETTEEEEEESSTTSCCEEEECC
T ss_pred CCceEEEeCCCCcccceEEec-ccceEEEeeCCEEEEEEcCCCCceEEEEcC
Confidence 4579999998774 5567777 67999999999988887653 5566554
No 231
>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A
Probab=27.37 E-value=72 Score=18.40 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=18.4
Q ss_pred EcCCCCCCCCCceEEEEeCCCCcE
Q psy3712 41 VGGGTHPKYPNNRVMIWDDLKKQV 64 (109)
Q Consensus 41 Vg~g~~p~~~~n~v~IwDd~~~~~ 64 (109)
.|.....-|.+++|.||-|..+..
T Consensus 39 ~g~~vT~Dfr~~RV~V~vD~~g~V 62 (69)
T 1mit_A 39 EGTPVTKDFRCNRVRIWVNKRGLV 62 (69)
T ss_dssp TTCCCCSSCCTTEEEEEEETTTEE
T ss_pred CCCccCCCcCCCEEEEEECCCCcE
Confidence 455556789999999998877653
No 232
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=27.10 E-value=1.5e+02 Score=20.28 Aligned_cols=62 Identities=23% Similarity=0.153 Sum_probs=40.5
Q ss_pred EEEEEEcCCccEEEEEcCCC----CCC----------------CCCceEEEEeCCCCcEEEEEEccCceeEEEecCCEEE
Q psy3712 26 LGHVEMLFRCNYLALVGGGT----HPK----------------YPNNRVMIWDDLKKQVVICLEFNAPVKGVRLRRDKIV 85 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~----~p~----------------~~~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r~~lv 85 (109)
+..+..-...+.||+.+... .|. -....|.+||..+++.+..++.+ .+..+..+.+-++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~ 184 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIV 184 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEE
Confidence 55556666778888886321 000 01367999999988875666655 8889999998744
Q ss_pred EEe
Q psy3712 86 VVL 88 (109)
Q Consensus 86 Vvl 88 (109)
++.
T Consensus 185 ~~~ 187 (347)
T 2gop_A 185 VNV 187 (347)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 233
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=27.08 E-value=1.5e+02 Score=20.00 Aligned_cols=48 Identities=6% Similarity=0.123 Sum_probs=38.3
Q ss_pred CceEEEEeCCCCcEEEEEEcc-CceeEEEecCC--EEEEEeCC--eEEEEEcC
Q psy3712 51 NNRVMIWDDLKKQVVICLEFN-APVKGVRLRRD--KIVVVLEG--LIKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~-s~V~~V~l~r~--~lvVvl~~--~i~vy~~~ 98 (109)
.+.|.+||..+++.+..+..+ ..+.++.++++ +|.|...+ .|..|+..
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 368999999878777777777 57889998654 48888776 99999876
No 234
>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C
Probab=26.65 E-value=81 Score=18.94 Aligned_cols=25 Identities=20% Similarity=0.237 Sum_probs=19.4
Q ss_pred EEcCCCCCCCCCceEEEEeCCCCcE
Q psy3712 40 LVGGGTHPKYPNNRVMIWDDLKKQV 64 (109)
Q Consensus 40 lVg~g~~p~~~~n~v~IwDd~~~~~ 64 (109)
-.|....+.|.+++|.||-|..+..
T Consensus 48 ~~Gs~VT~Dfr~~RVrV~VD~~g~V 72 (79)
T 3rdy_A 48 PEGSAVPRDLRCDRVWVFVDERGVV 72 (79)
T ss_dssp ETTCCCCSCCCSSEEEEEECTTSBB
T ss_pred CCCCccCCccCCCEEEEEECCCCeE
Confidence 3455556789999999999987753
No 235
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=26.65 E-value=1.6e+02 Score=20.31 Aligned_cols=67 Identities=12% Similarity=0.145 Sum_probs=43.6
Q ss_pred EEEEEEcCCccEEEEEcCCCCCCCCCceEEEEeCC---CCcEEEEEEc-cCceeEEEecCC--EEEEEeC--CeEEEEEc
Q psy3712 26 LGHVEMLFRCNYLALVGGGTHPKYPNNRVMIWDDL---KKQVVICLEF-NAPVKGVRLRRD--KIVVVLE--GLIKVYTF 97 (109)
Q Consensus 26 v~~veml~~tn~ialVg~g~~p~~~~n~v~IwDd~---~~~~i~el~f-~s~V~~V~l~r~--~lvVvl~--~~i~vy~~ 97 (109)
..-+..-.+.+++++.+.+ .+.+.+||.. +-+.+..+.. ...+.++.++.+ +|+|+-. +.|.+|++
T Consensus 242 ~~~i~~spdG~~l~v~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNRG------YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEEEECTTSCEEEEEEET------TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ceeEEECCCCCEEEEEeCC------CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 4445555556666555433 4789999976 2245555555 335889999865 5777754 68999976
Q ss_pred C
Q psy3712 98 I 98 (109)
Q Consensus 98 ~ 98 (109)
.
T Consensus 316 d 316 (347)
T 3hfq_A 316 D 316 (347)
T ss_dssp C
T ss_pred e
Confidence 4
No 236
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=26.40 E-value=1.7e+02 Score=20.43 Aligned_cols=48 Identities=17% Similarity=0.035 Sum_probs=35.4
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeEEEecC---CEEEEEeCC-------eEEEEEcC
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKGVRLRR---DKIVVVLEG-------LIKVYTFI 98 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~V~l~r---~~lvVvl~~-------~i~vy~~~ 98 (109)
...+.+||..+++...-..-+..+..+.++. ++|+.+... +|++++..
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 3789999999887665555566789999988 356665542 78888875
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=26.20 E-value=2.5e+02 Score=22.48 Aligned_cols=55 Identities=18% Similarity=0.336 Sum_probs=41.1
Q ss_pred ceEEEEeCCCCcEEEEEEccCceeEEEe--cCCEEEEEe-CCeEEEEEcCCCCEEeEEe
Q psy3712 52 NRVMIWDDLKKQVVICLEFNAPVKGVRL--RRDKIVVVL-EGLIKVYTFIQCPQQLHIY 107 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~s~V~~V~l--~r~~lvVvl-~~~i~vy~~~~~~~ll~~~ 107 (109)
..|..||.++++.+-++....++.+.-+ ..+.+++.. +..+++++.. +=+.++++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~-tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA-TGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT-TCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC-CCceeeee
Confidence 6799999999999999998876654333 344555543 5799999998 46777765
No 238
>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}
Probab=24.68 E-value=85 Score=18.02 Aligned_cols=23 Identities=26% Similarity=0.573 Sum_probs=17.9
Q ss_pred EcCCCCCCCCCceEEEEeCCCCc
Q psy3712 41 VGGGTHPKYPNNRVMIWDDLKKQ 63 (109)
Q Consensus 41 Vg~g~~p~~~~n~v~IwDd~~~~ 63 (109)
.|....+-|.+++|.||-|..+.
T Consensus 38 ~g~~vT~Df~~~RV~v~vD~~g~ 60 (68)
T 1vbw_A 38 VGSGATKDFRCDRVRVWVTERGI 60 (68)
T ss_dssp TTSCCCCSCCTTEEEEEECTTSB
T ss_pred CCCccCCCcCCCEEEEEECCCCc
Confidence 34445678999999999887765
No 239
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=24.56 E-value=2e+02 Score=24.42 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=26.2
Q ss_pred EEcCCccEEEEEcCCCCCCCCCceEEEEeCCCCcEEEEEEccC
Q psy3712 30 EMLFRCNYLALVGGGTHPKYPNNRVMIWDDLKKQVVICLEFNA 72 (109)
Q Consensus 30 eml~~tn~ialVg~g~~p~~~~n~v~IwDd~~~~~i~el~f~s 72 (109)
....+..++..|.. .++++|||..+++.+.......
T Consensus 242 ~~~~~~~~lftl~~-------D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 242 IFLSTYNVLVMLSL-------DYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp EEETTTTEEEEEET-------TCEEEEEETTTTEEEEEEECCC
T ss_pred eecCCCcEEEEEEC-------CCEEEEEECCCCCeEeeecccc
Confidence 34445556655553 4789999999999999988743
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=23.42 E-value=1.4e+02 Score=24.42 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=39.4
Q ss_pred ceEEEEeCCC--CcE-EEEEEccCceeEEEecCC--EEEEEeC--CeEEEEEcC
Q psy3712 52 NRVMIWDDLK--KQV-VICLEFNAPVKGVRLRRD--KIVVVLE--GLIKVYTFI 98 (109)
Q Consensus 52 n~v~IwDd~~--~~~-i~el~f~s~V~~V~l~r~--~lvVvl~--~~i~vy~~~ 98 (109)
+.|.|.|.++ ++. +..+..+..--++.++.| +++|..+ ++|.||++.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 5599999998 666 889999999999999964 5777654 899999998
No 241
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=23.31 E-value=1.3e+02 Score=25.94 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=19.7
Q ss_pred CceEEEEeCCCCcEEEEEEccCc
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAP 73 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~ 73 (109)
.++++|||..+++.+.+....+.
T Consensus 258 D~~LRiWsl~t~~~v~t~DL~~~ 280 (1139)
T 4fhn_B 258 DYKLKVLDLSTNQCVETIELSQT 280 (1139)
T ss_dssp TCEEEEEETTTTEEEEEEECCCS
T ss_pred CCEEEEEECCCCCeEEeechhhc
Confidence 47899999999999999887653
No 242
>2nwa_A Hypothetical protein YTMB; mostly beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Bacillus subtilis} SCOP: b.122.1.13
Probab=23.20 E-value=23 Score=22.07 Aligned_cols=10 Identities=40% Similarity=1.135 Sum_probs=7.9
Q ss_pred CcceEEEeec
Q psy3712 2 EDGFRIYNCD 11 (109)
Q Consensus 2 ~~Gf~Iy~~~ 11 (109)
.+|||||-.|
T Consensus 29 KeGYRiyPld 38 (88)
T 2nwa_A 29 KDGYRVYPME 38 (88)
T ss_dssp EESCEECCSS
T ss_pred eCceEEeecc
Confidence 4799999776
No 243
>3pp4_P B-lymphocyte antigen CD20; antibody FAB fragment IG-domain, cyclic peptide, antib antigen, immune system; 1.60A {Homo sapiens} PDB: 3bky_P 2osl_P
Probab=22.74 E-value=13 Score=17.89 Aligned_cols=7 Identities=71% Similarity=1.720 Sum_probs=5.3
Q ss_pred EEeecCC
Q psy3712 7 IYNCDPL 13 (109)
Q Consensus 7 Iy~~~P~ 13 (109)
||||+|-
T Consensus 2 IynCE~a 8 (25)
T 3pp4_P 2 IYNCEPA 8 (26)
T ss_dssp CCCCSCS
T ss_pred ccccccC
Confidence 6888874
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.53 E-value=2.7e+02 Score=22.23 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=22.1
Q ss_pred CceEEEEeCCCCcEEEEEEccCceeE
Q psy3712 51 NNRVMIWDDLKKQVVICLEFNAPVKG 76 (109)
Q Consensus 51 ~n~v~IwDd~~~~~i~el~f~s~V~~ 76 (109)
...+..||.++++.+-+.+.++.+.+
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~~~ 518 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGAIG 518 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred CCeEEEEECCCCCEEEEeeCCCCcEe
Confidence 46899999999999999998875554
No 245
>1n0e_A Protein MRAZ; cell division and cell WALL biosynthesis protein, structural genomics, BSGC structure funded by NIH; 2.70A {Mycoplasma pneumoniae} SCOP: b.129.1.2 PDB: 1n0f_A 1n0g_A
Probab=21.34 E-value=53 Score=22.47 Aligned_cols=17 Identities=29% Similarity=0.620 Sum_probs=13.4
Q ss_pred EEEEEcCCCCCCCCCceEEEEeCC
Q psy3712 37 YLALVGGGTHPKYPNNRVMIWDDL 60 (109)
Q Consensus 37 ~ialVg~g~~p~~~~n~v~IwDd~ 60 (109)
=+++||.| +++-|||..
T Consensus 127 evv~vG~g-------~~fEIW~~e 143 (166)
T 1n0e_A 127 EIVLIGQF-------DHLEIWDKK 143 (166)
T ss_dssp CEEEEECB-------SCEEEEEHH
T ss_pred cEEEEeCC-------CEEEECCHH
Confidence 36789976 789999964
No 246
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=20.70 E-value=1.9e+02 Score=18.96 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=32.6
Q ss_pred ceEEEEeCCCCcEEEEEEcc--CceeEEEecCC-EEEEEe--CCeEEEEEcCC
Q psy3712 52 NRVMIWDDLKKQVVICLEFN--APVKGVRLRRD-KIVVVL--EGLIKVYTFIQ 99 (109)
Q Consensus 52 n~v~IwDd~~~~~i~el~f~--s~V~~V~l~r~-~lvVvl--~~~i~vy~~~~ 99 (109)
+.|.+||...+..... .+. ..+.++.+..+ ++.|+. .+.|.+|+...
T Consensus 171 ~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 171 NRVVKLEAESNNQVVL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp TEEEEECTTTCCEEEC-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred CEEEEEecCCCceEee-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 5788888776654322 121 45788999876 888877 46899998763
No 247
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.54 E-value=2.2e+02 Score=19.79 Aligned_cols=51 Identities=4% Similarity=-0.010 Sum_probs=37.2
Q ss_pred CCCceEEEEeCCCCcEEEEEEc----cCceeEEEecCC-EEEEEe--CCeEEEEEcCC
Q psy3712 49 YPNNRVMIWDDLKKQVVICLEF----NAPVKGVRLRRD-KIVVVL--EGLIKVYTFIQ 99 (109)
Q Consensus 49 ~~~n~v~IwDd~~~~~i~el~f----~s~V~~V~l~r~-~lvVvl--~~~i~vy~~~~ 99 (109)
...+.+.+||..+++.+..+.- -....+|.++.+ .+.|+- .++|.+|+...
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3456899999999998877632 234788999887 555554 37899998763
Done!