BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3714
(467 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 243/362 (67%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFYP+VK+Q
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYPVVKEQ 331
Query: 446 SR 447
S+
Sbjct: 332 SQ 333
Score = 271 bits (692), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 270 bits (691), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 10 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 69
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 70 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 129
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 189
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 190 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 249
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 250 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 304
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 305 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 336
Query: 446 SR 447
+R
Sbjct: 337 AR 338
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 148 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 207
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 208 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 267
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 268 IELDPRFNDILGR 280
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 4 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 63
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 64 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 123
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 298
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 299 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 330
Query: 446 SR 447
+R
Sbjct: 331 AR 332
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 262 IELDPRFNDILGR 274
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/362 (61%), Positives = 242/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VAVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNV+IDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNV+IDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/362 (61%), Positives = 241/362 (66%), Gaps = 86/362 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
QTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Query: 446 SR 447
+R
Sbjct: 332 AR 333
Score = 271 bits (692), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 240/360 (66%), Gaps = 86/360 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 331
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/360 (61%), Positives = 240/360 (66%), Gaps = 86/360 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 4 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 63
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 64 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 123
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 298
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
FLDKLLRYDH RLTAREAM+HPYFY +VKDQ
Sbjct: 299 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQ 330
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 262 IELDPRFNDILGR 274
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/359 (61%), Positives = 239/359 (66%), Gaps = 86/359 (23%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDYES+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 3 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 62
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 63 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 122
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 297
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKD 444
FLDKLLRYDH RLTAREAM+HPYFY +VKD
Sbjct: 298 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 328
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 141 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 261 IELDPRFNDILGR 273
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/358 (60%), Positives = 237/358 (66%), Gaps = 86/358 (24%)
Query: 139 ILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDX 198
+ RARVY DVN+H+PREYWDY S+VV+WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 199 XXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL 258
LENLRGG NIITL +VKDPVSRTPAL+FEHVNNTDFKQL
Sbjct: 65 VVVKILKPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 259 YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
YQTLTDYDIR+Y+YE+LKALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 319 GQEYNVRVASRYFKGPELLADYQ------------------------------------- 341
GQEYNVRVASRYFKGPELL DYQ
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 ----------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
Y+IELDPRF DILGRHSRKRWERFVH+ENQHLVSPEALD
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD----- 299
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
FLDKLLRYDH RLTAREAM+HPYFY +VK
Sbjct: 300 ----------------------------FLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 125/133 (93%), Positives = 131/133 (98%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHSMGIMHRDVKPHNVMIDHE+RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE+L++Y+DKY+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 130 IELDPRFADILGR 142
IELDPRF DILGR
Sbjct: 263 IELDPRFNDILGR 275
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 232/360 (64%), Gaps = 86/360 (23%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
RARVYA+VNS + REYWDYE++V WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 8 SRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVV 67
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
LENLRGGTNII L VKDPVS+TPAL+FE++NNTDFKQLYQ
Sbjct: 68 VKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ 127
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
LTD+DIR+Y+YELLKALDYCHS GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP Q
Sbjct: 128 ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ 187
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL DYQ
Sbjct: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 247
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
YHI+LDP F DILG+HSRKRWE F+H+EN+HLVSPEAL
Sbjct: 248 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEAL-------- 299
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSR 447
D LDKLLRYDH +RLTA+EAM+HPYFYP+VK+QS+
Sbjct: 300 -------------------------DLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQ 334
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 118/133 (88%), Positives = 124/133 (93%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP QEYNVRVASRYFKGPEL
Sbjct: 144 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 203
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFR+EPFFHG DNYDQLVRIAKVLGTEEL+ YL KYH
Sbjct: 204 LVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYH 263
Query: 130 IELDPRFADILGR 142
I+LDP F DILG+
Sbjct: 264 IDLDPHFNDILGQ 276
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 232/360 (64%), Gaps = 86/360 (23%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
RARVYA+VNS + REYWDYE++V WG QDDYQLVRKLGRGKYSEVFEAIN+ +++
Sbjct: 13 SRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVV 72
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
LENLRGGTNII L VKDPVS+TPAL+FE++NNTDFKQLYQ
Sbjct: 73 VKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ 132
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
LTD+DIR+Y+YELLKALDYCHS GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP Q
Sbjct: 133 ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ 192
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL DYQ
Sbjct: 193 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 252
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
YHI+LDP F DILG+HSRKRWE F+H+EN+HLVSPEAL
Sbjct: 253 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEAL-------- 304
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSR 447
D LDKLLRYDH +RLTA+EAM+HPYFYP+VK+QS+
Sbjct: 305 -------------------------DLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQ 339
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/133 (88%), Positives = 124/133 (93%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDH+ +KLRLIDWGLAEFYHP QEYNVRVASRYFKGPEL
Sbjct: 149 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPEL 208
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L DYQMYDYSLDMWSLGCMLASMIFR+EPFFHG DNYDQLVRIAKVLGTEEL+ YL KYH
Sbjct: 209 LVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYH 268
Query: 130 IELDPRFADILGR 142
I+LDP F DILG+
Sbjct: 269 IDLDPHFNDILGQ 281
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 218/363 (60%), Gaps = 86/363 (23%)
Query: 140 LGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXX 199
+ +ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
Query: 200 XXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY 259
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IIKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG
Sbjct: 121 PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 180
Query: 320 QEYNVRVASRYFKGPELLADYQ-------------------------------------- 341
+EYNVRVASRYFKGPELL D Q
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 240
Query: 342 ---------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 AKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------ 294
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
FLDKLLRYDH ERLTA EAM HPYF + ++
Sbjct: 295 ---------------------------FLDKLLRYDHQERLTALEAMTHPYFQQVRAAEN 327
Query: 447 RHT 449
T
Sbjct: 328 SRT 330
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 257
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 258 IELDPQLEALVGR 270
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 346 bits (887), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 218/363 (60%), Gaps = 86/363 (23%)
Query: 140 LGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXX 199
+ +ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 60
Query: 200 XXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY 259
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 120
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG
Sbjct: 121 PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 180
Query: 320 QEYNVRVASRYFKGPELLADYQ-------------------------------------- 341
+EYNVRVASRYFKGPELL D Q
Sbjct: 181 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 240
Query: 342 ---------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 AKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------ 294
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
FLDKLLRYDH ERLTA EAM HPYF + ++
Sbjct: 295 ---------------------------FLDKLLRYDHQERLTALEAMTHPYFQQVRAAEN 327
Query: 447 RHT 449
T
Sbjct: 328 SRT 330
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 257
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 258 IELDPQLEALVGR 270
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 218/363 (60%), Gaps = 86/363 (23%)
Query: 140 LGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXX 199
+ +ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 21 MSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKC 80
Query: 200 XXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY 259
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 81 IIKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY 140
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG
Sbjct: 141 PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 200
Query: 320 QEYNVRVASRYFKGPELLADYQ-------------------------------------- 341
+EYNVRVASRYFKGPELL D Q
Sbjct: 201 KEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 260
Query: 342 ---------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 261 AKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------ 314
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
FLDKLLRYDH ERLTA EAM HPYF + ++
Sbjct: 315 ---------------------------FLDKLLRYDHQERLTALEAMTHPYFQQVRAAEN 347
Query: 447 RHT 449
T
Sbjct: 348 SRT 350
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 217
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 218 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYR 277
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 278 IELDPQLEALVGR 290
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 217/362 (59%), Gaps = 86/362 (23%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSR 447
FLDKLLRYDH ERLTA EAM HPYF + ++
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYFQQVRAAENS 327
Query: 448 HT 449
T
Sbjct: 328 RT 329
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 345 bits (884), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 217/362 (59%), Gaps = 86/362 (23%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 3 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 62
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 63 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 122
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 123 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 182
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 243 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 295
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSR 447
FLDKLLRYDH ERLTA EAM HPYF + ++
Sbjct: 296 --------------------------FLDKLLRYDHQERLTALEAMTHPYFQQVRAAENS 329
Query: 448 HT 449
T
Sbjct: 330 RT 331
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 199 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 258
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 259 IELDPQLEALVGR 271
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 344 bits (882), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 213/351 (60%), Gaps = 86/351 (24%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
FLDKLLRYDH ERLTA EAM HPYF
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYF 318
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 344 bits (882), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 213/351 (60%), Gaps = 86/351 (24%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
FLDKLLRYDH ERLTA EAM HPYF
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYF 318
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 344 bits (882), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 213/351 (60%), Gaps = 86/351 (24%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
FLDKLLRYDH ERLTA EAM HPYF
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYF 318
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 343 bits (881), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 213/351 (60%), Gaps = 86/351 (24%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
FLDKLLRYDH ERLTA EAM HPYF
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYF 318
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 213/351 (60%), Gaps = 86/351 (24%)
Query: 141 GRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXX 200
+ARVYADVN +P+EYWDYE+ V WG+QDDY++VRK+GRGKYSEVFE INV +++
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 201 XXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ 260
L+NL GG NI+ L +V+D S+TP+LIFE+VNNTDFK LY
Sbjct: 61 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TLTDYDIRYY+YELLKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 321 EYNVRVASRYFKGPELLADYQ--------------------------------------- 341
EYNVRVASRYFKGPELL D Q
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 342 --------------YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y IELDP+ ++GRHSRK W +F++ +NQHLVSPEA+D
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAID------- 293
Query: 388 GRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
FLDKLLRYDH ERLTA EAM HPYF
Sbjct: 294 --------------------------FLDKLLRYDHQERLTALEAMTHPYF 318
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/133 (82%), Positives = 119/133 (89%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
ALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPG+EYNVRVASRYFKGPEL
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
L D Q YDYSLDMWSLGCM A MIFRKEPFF+GHDN+DQLV+IAKVLGT+ L YL+KY
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYR 256
Query: 130 IELDPRFADILGR 142
IELDP+ ++GR
Sbjct: 257 IELDPQLEALVGR 269
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS+GI HRD+KP N+++D + L+LID+G A+ G+ + SRY++ PEL
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPEL 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y ++D+WS GC++A ++ + +P F G DQLV I KVLGT
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGESGIDQLVEIIKVLGT 260
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 27/216 (12%)
Query: 245 LIFEHVNNTDFK------QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI 298
L+ E+V T ++ +L QT+ I+ Y+Y+LL++L Y HS+GI HRD+KP N+++
Sbjct: 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL--------- 346
D + L+LID+G A+ G+ + SRY++ PEL+ +Y +I++
Sbjct: 175 DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE 234
Query: 347 ----DPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTE 402
P F G + + T ++ + ++++ + + R F
Sbjct: 235 LMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH----KFPQIRPHPFSKVF 290
Query: 403 NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
P+A+D + +LL Y RLTA EA+ HP+F
Sbjct: 291 RPR-TPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ + HS+GI HRD+KP N++++ ++ L+L D+G A+ P + + SR+++ PEL
Sbjct: 153 AVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPEL 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
+ Y S+D+WS+GC+ +I K P F G + DQLVRI +++GT +
Sbjct: 213 MLGATEYTPSIDLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQIMGTPT-----KEQM 266
Query: 130 IELDPRFADI 139
I ++P + ++
Sbjct: 267 IRMNPHYTEV 276
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 27/191 (14%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV 326
I Y+Y+L +A+ + HS+GI HRD+KP N++++ ++ L+L D+G A+ P + +
Sbjct: 143 ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXI 202
Query: 327 ASRYFKGPELL---ADYQYHIEL---DPRFADIL-------GRHSRKRWERFVHTENQHL 373
SR+++ PEL+ +Y I+L F +++ G S + R + Q +
Sbjct: 203 CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRII----QIM 258
Query: 374 VSPEALDFLDKNILGRHSR------KRWERFVHTENQHLVSPEALDFLDKLLRYDHYERL 427
+P + N R K W + + L A+D L+++LRY+ R+
Sbjct: 259 GTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL----AIDLLEQILRYEPDLRI 314
Query: 428 TAREAMDHPYF 438
EAM HP+F
Sbjct: 315 NPYEAMAHPFF 325
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 255 FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ + QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 315 FYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHS 358
G+ + SRY++ PEL+ DY I++ P F G
Sbjct: 206 QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265
Query: 359 RKRWERFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFL 415
+ + T + + +P +F I W + PEA+
Sbjct: 266 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALC 317
Query: 416 DKLLRYDHYERLTAREAMDHPYF 438
+LL Y RLT EA H +F
Sbjct: 318 SRLLEYTPTARLTPLEACAHSFF 340
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 253
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 249 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 300
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 301 YTPTARLTPLEACAHSFF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 249
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 125 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 184
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 185 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 244
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 245 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 296
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 297 YTPTARLTPLEACAHSFF 314
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 260
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 136 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 195
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 196 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 255
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 256 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 307
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 308 YTPTARLTPLEACAHSFF 325
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 253
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 129 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 189 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 249 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 300
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 301 YTPTARLTPLEACAHSFF 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFAFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 245
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 121 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 180
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 181 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 240
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 241 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 292
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 293 YTPTARLTPLEACAHSFF 310
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 242
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 118 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 177
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 178 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 237
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 238 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 289
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 290 YTPTARLTPLEACAHSFF 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 221
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 145 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 204
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 205 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 264
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 265 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 316
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 317 YTPTARLTPLEACAHSFF 334
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 231
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 255 FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ + QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+
Sbjct: 150 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
Query: 315 FYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHS 358
G+ + SRY++ PEL+ DY I++ P F G
Sbjct: 210 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 269
Query: 359 RKRWERFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFL 415
+ + T + + +P +F I W + PEA+
Sbjct: 270 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALC 321
Query: 416 DKLLRYDHYERLTAREAMDHPYF 438
+LL Y RLT EA H +F
Sbjct: 322 SRLLEYTPTARLTPLEACAHSFF 344
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 229
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 255 FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ + QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+
Sbjct: 148 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
Query: 315 FYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHS 358
G+ + SRY++ PEL+ DY I++ P F G
Sbjct: 208 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 267
Query: 359 RKRWERFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFL 415
+ + T + + +P +F I W + PEA+
Sbjct: 268 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALC 319
Query: 416 DKLLRYDHYERLTAREAMDHPYF 438
+LL Y RLT EA H +F
Sbjct: 320 SRLLEYTPTARLTPLEACAHSFF 342
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 246
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 122 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 181
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 182 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 241
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 242 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 293
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 294 YTPTARLTPLEACAHSFF 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 255 FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ + QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+
Sbjct: 146 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
Query: 315 FYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHS 358
G+ + SRY++ PEL+ DY I++ P F G
Sbjct: 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 265
Query: 359 RKRWERFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFL 415
+ + T + + +P +F I W + PEA+
Sbjct: 266 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALC 317
Query: 416 DKLLRYDHYERLTAREAMDHPYF 438
+LL Y RLT EA H +F
Sbjct: 318 SRLLEYTPTARLTPLEACAHSFF 340
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 272
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 320
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 255 FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ + QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+
Sbjct: 191 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
Query: 315 FYHPGQEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHS 358
G+ + SRY++ PEL+ DY I++ P F G
Sbjct: 251 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 310
Query: 359 RKRWERFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFL 415
+ + T + + +P +F I W + PEA+
Sbjct: 311 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALC 362
Query: 416 DKLLRYDHYERLTAREAMDHPYF 438
+LL Y RLT EA H +F
Sbjct: 363 SRLLEYTPTARLTPLEACAHSFF 385
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
L+Y H I+HRD+KP+N+++D EN L+L D+GLA+ F P + Y +V +R+++ PE
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPE 182
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
LL +MY +DMW++GC+LA ++ R PF G + DQL RI + LGT
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRIFETLGT 231
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 244 ALIFEHVNNTDFKQLYQ----TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
+L+F+ + TD + + + LT I+ Y+ L+ L+Y H I+HRD+KP+N+++D
Sbjct: 88 SLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD 146
Query: 300 HENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLADYQYH-------------IE 345
EN L+L D+GLA+ F P + Y +V +R+++ PELL + + E
Sbjct: 147 -ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 205
Query: 346 LDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQH 405
L R + G + R T L +P + D L + ++ F H
Sbjct: 206 LLLRVPFLPGDSDLDQLTRIFET----LGTPTEEQWPDMCSLPDYV--TFKSFPGIPLHH 259
Query: 406 LVSPEA---LDFLDKLLRYDHYERLTAREAMDHPYF 438
+ S LD + L ++ R+TA +A+ YF
Sbjct: 260 IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 254
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 130 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 190 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 249
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 250 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 301
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 302 YTPTARLTPLEACAHSFF 319
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFAFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+L Y HS GI HRD+KP N+++D + L+L D+G A+ G+ + SRY++ PEL
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y S+D+WS GC+LA ++ +P F G DQLV I KVLGT
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
QTL ++ Y+Y+L ++L Y HS GI HRD+KP N+++D + L+L D+G A+ G
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 320 QEYNVRVASRYFKGPELL---ADYQYHIEL-------------DPRFADILGRHSRKRWE 363
+ + SRY++ PEL+ DY I++ P F G
Sbjct: 177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
Query: 364 RFVHTENQHLV---SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLR 420
+ + T + + +P +F I W + PEA+ +LL
Sbjct: 237 KVLGTPTREQIREMNPNYTEFKFPQIKAHP----WTKVFRPRT----PPEAIALCSRLLE 288
Query: 421 YDHYERLTAREAMDHPYF 438
Y RLT EA H +F
Sbjct: 289 YTPTARLTPLEACAHSFF 306
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
S+ + S+ + HRD+KPHNV+++ + L+L D+G A+ P + + SRY++ P
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELFEYL 125
EL+ Q Y ++D+WS+GC+ A M+ EP F G ++ QL I +VLG + E+ L
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 126 DKYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDW 167
+ H ++D + + + V++D + +E +D S ++ +
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQY 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 26/193 (13%)
Query: 267 IRYYLYELLKALDYCH--SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV 324
I+ +L++L++++ H S+ + HRD+KPHNV+++ + L+L D+G A+ P +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 325 RVASRYFKGPELLADYQYHI------ELDPRFADIL-------GRHSRKRWERFVHT--- 368
+ SRY++ PEL+ Q++ + FA+++ G +S + V
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250
Query: 369 ---ENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYE 425
E ++P D N G W V +++ + EA D L LL+Y E
Sbjct: 251 PSREVLRKLNPSHTDVDLYNSKG----IPWSN-VFSDHSLKDAKEAYDLLSALLQYLPEE 305
Query: 426 RLTAREAMDHPYF 438
R+ EA+ HPYF
Sbjct: 306 RMKPYEALCHPYF 318
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ N +L+L D+GLA F P + Y+ V + +++ P+
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINR-NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L ++Y S+DMWS GC+ A + P F G+D DQL RI ++LGT
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGT 221
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 41/295 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX-----XXXXXXXXXXXXXLENLRGGTN 227
Y+ + K+G G Y VF+A N ++ + L+ L+ N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KN 62
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLT-DYD---IRYYLYELLKALDYCHS 283
I+ L V+ T L+FE + D K+ + + D D ++ +L++LLK L +CHS
Sbjct: 63 IVRLHDVLHSDKKLT--LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLADYQ- 341
++HRD+KP N++I+ N +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 120 RNVLHRDLKPQNLLINR-NGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 342 YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFV 399
Y +D A + + + + D L + +LG + ++W
Sbjct: 179 YSTSIDMWSAGCI-------FAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 400 H------------TENQHLVSPE----ALDFLDKLLRYDHYERLTAREAMDHPYF 438
T + V P+ D L LL+ + +R++A EA+ HPYF
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE+
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + + F G D DQL RI +V+GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 247
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 39/243 (16%)
Query: 220 ENLRGGTNIITLQAVVKD--PVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKA 277
EN+ G ++ T ++D V L+ +NN Q L+D +++ +Y+LL+
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQFLVYQLLRG 143
Query: 278 LDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE++
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIM 200
Query: 338 ADYQYHIE------LDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
++ ++ + + A++L + KR V T SPE L
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP-----SPEVL-- 253
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVS------PEALDFLDKLLRYDHYERLTAREAMDH 435
I H+R + + L S P A+D L ++L D +R++A EA+ H
Sbjct: 254 --AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 436 PYF 438
YF
Sbjct: 312 AYF 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE+
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + + F G D DQL RI +V+GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 247
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 39/243 (16%)
Query: 220 ENLRGGTNIITLQAVVKD--PVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKA 277
EN+ G ++ T ++D V L+ +NN Q L+D +++ +Y+LL+
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI---VKCQALSDEHVQFLVYQLLRG 143
Query: 278 LDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE++
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIM 200
Query: 338 ADYQYHIE------LDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
++ ++ + + A++L + KR V T SPE L
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP-----SPEVL-- 253
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVS------PEALDFLDKLLRYDHYERLTAREAMDH 435
I H+R + + L S P A+D L ++L D +R++A EA+ H
Sbjct: 254 --AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 436 PYF 438
YF
Sbjct: 312 AYF 314
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ N +L+L ++GLA F P + Y+ V + +++ P+
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINR-NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L ++Y S+DMWS GC+ A + P F G+D DQL RI ++LGT
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 41/295 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX-----XXXXXXXXXXXXXLENLRGGTN 227
Y+ + K+G G Y VF+A N ++ + L+ L+ N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KN 62
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLT-DYD---IRYYLYELLKALDYCHS 283
I+ L V+ T L+FE + D K+ + + D D ++ +L++LLK L +CHS
Sbjct: 63 IVRLHDVLHSDKKLT--LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLADYQ- 341
++HRD+KP N++I+ N +L+L ++GLA F P + Y+ V + +++ P++L +
Sbjct: 120 RNVLHRDLKPQNLLINR-NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 342 YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFV 399
Y +D A + + + + D L + +LG + ++W
Sbjct: 179 YSTSIDMWSAGCI-------FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231
Query: 400 H------------TENQHLVSPE----ALDFLDKLLRYDHYERLTAREAMDHPYF 438
T + V P+ D L LL+ + +R++A EA+ HPYF
Sbjct: 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE+
Sbjct: 135 GLKYIHSAGIIHRDLKPSNVAVN-EDCELRILDFGLAR--QADEEMTGYVATRWYRAPEI 191
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + + F G D DQL RI +V+GT
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 239
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%), Gaps = 39/243 (16%)
Query: 220 ENLRGGTNIITLQAVVKD--PVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKA 277
EN+ G ++ T ++D V L+ +NN Q L+D +++ +Y+LL+
Sbjct: 79 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI---VKCQALSDEHVQFLVYQLLRG 135
Query: 278 LDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
L Y HS GI+HRD+KP NV ++ E+ +LR++D+GLA +E VA+R+++ PE++
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAVN-EDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIM 192
Query: 338 ADYQYHIE------LDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
++ ++ + + A++L + KR V T SPE L
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP-----SPEVL-- 245
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVS------PEALDFLDKLLRYDHYERLTAREAMDH 435
I H+R + + L S P A+D L ++L D +R++A EA+ H
Sbjct: 246 --AKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 303
Query: 436 PYF 438
YF
Sbjct: 304 AYF 306
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLSFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 231
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 70 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 244
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 245 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FEHV+ D K LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 122 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 231
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 70 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 244
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 245 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 61 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 235
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 236 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
Query: 442 VK 443
K
Sbjct: 292 TK 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 228
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 67 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 124 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 241
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 242 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 62 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 236
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 237 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
Query: 442 VK 443
K
Sbjct: 293 TK 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 62 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 236
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 237 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
Query: 442 VK 443
K
Sbjct: 293 TK 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FEHV+ D K+ LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 177
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 228
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 64 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 238
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 239 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 294
Query: 442 VK 443
K
Sbjct: 295 TK 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K LT I+ YL++LL+ L
Sbjct: 62 NHPNIVKLLDVIH--TENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 236
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 237 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
Query: 442 VK 443
K
Sbjct: 293 TK 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 62 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 236
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 237 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 61 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 235
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 236 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
Query: 442 VK 443
K
Sbjct: 292 TK 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 35/294 (11%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRGGT 226
+++Q V K+G G Y V++A N + + L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L +C
Sbjct: 63 NIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 63 NHPNIVKLLDVIH--TENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 237
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 238 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 293
Query: 442 VK 443
K
Sbjct: 294 TK 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 61 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 235
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 236 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
Query: 442 VK 443
K
Sbjct: 292 TK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 62 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 236
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 237 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 292
Query: 442 VK 443
K
Sbjct: 293 TK 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 61 NHPNIVKLLDVIH--TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 235
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 236 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
Query: 442 VK 443
K
Sbjct: 292 TK 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLR 223
G +++Q V K+G G Y V++A N + + L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 224 GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYD---IRYYLYELLKAL 278
NI+ L V+ L+FE ++ D K+ LT I+ YL++LL+ L
Sbjct: 61 NHPNIVKLLDVIH--TENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 338 ADYQYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDF 381
+Y+ L FA+++ R + R R + T ++ +V P
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSM 235
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPI 441
D + S +W R ++ + + L ++L YD +R++A+ A+ HP+F +
Sbjct: 236 PDY----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 291
Query: 442 VK 443
K
Sbjct: 292 TK 293
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L +CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE
Sbjct: 115 GLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
+L + Y ++D+WSLGC+ A M+ R+ F G DQL RI + LGT +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 31/299 (10%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX----XXXXXXXXXXXXXXXLENLRG 224
+++Q V K+G G Y V++A N + + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 225 GTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L V+ F H + DF LT I+ YL++LL+ L +C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMD-ASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADY 340
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 HSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 341 QYHI------ELDPRFADILGRHS----------RKRWERFVHTENQHLVSPEALDFLDK 384
+Y+ L FA+++ R + R R + T ++ +V P D
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE-VVWPGVTSMPDY 237
Query: 385 NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
+ S +W R ++ + + L ++L YD +R++A+ A+ HP+F + K
Sbjct: 238 ----KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 80/148 (54%), Gaps = 16/148 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ +CHS I+HRD+KP N+++ ++ ++L D+G A PG+ Y+ VA+R+++ PE
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY 128
LL Y ++D+W++GC++ M F EP F G + DQL I LG
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEM-FMGEPLFPGDSDIDQLYHIMMCLGN---------- 243
Query: 129 HIELDPRFADILGRARVYADVNSHKPRE 156
L PR ++ + V+A V + +E
Sbjct: 244 ---LIPRHQELFNKNPVFAGVRLPEIKE 268
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT--DFKQLYQTLTDYDI-RYYLYELLKALDYCHS 283
N++ L V K + L+FE V++T D +L+ DY + + YL++++ + +CHS
Sbjct: 85 NLVNLLEVCKK--KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELL-ADYQ 341
I+HRD+KP N+++ ++ ++L D+G A PG+ Y+ VA+R+++ PELL D +
Sbjct: 143 HNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 342 YHIELD 347
Y +D
Sbjct: 202 YGKAVD 207
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ YCH ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y ++D+WS+GC+ A M+ P F G DQL+RI ++LGT
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGT 219
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT----LTDYDIRYYLYELLKALDYC 281
+NI+ L V+ + L+FEH++ D K+L L + +L +LL + YC
Sbjct: 60 SNIVKLYDVIH--TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LLAD 339
H ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P+ L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 340 YQYHIELD---------------PRFADILGRHSRKRWERFVHTEN-QHLVSPEALDFLD 383
+Y +D P F + R R + T N ++ + L D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 384 KNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
N + WE F+ ++ +D L K+L+ D +R+TA++A++H YF
Sbjct: 236 PN-FTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ YCH ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y ++D+WS+GC+ A M+ P F G DQL+RI ++LGT
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMV-NGAPLFPGVSEADQLMRIFRILGT 219
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT----LTDYDIRYYLYELLKALDYC 281
+NI+ L V+ + L+FEH++ D K+L L + +L +LL + YC
Sbjct: 60 SNIVKLYDVIH--TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LLAD 339
H ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P+ L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 340 YQYHIELD---------------PRFADILGRHSRKRWERFVHTEN-QHLVSPEALDFLD 383
+Y +D P F + R R + T N ++ + L D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 384 KNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
N + WE F+ ++ +D L K+L+ D +R+TA++A++H YF
Sbjct: 236 PN-FTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS G++HRD+KP N+ ++ E+ +L+++D+GLA H E V +R+++ PE+
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEV 194
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ + Y+ ++D+WS+GC++A M+ K F G D DQL +I KV G
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTGV 242
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 252 NTDFKQLYQ-TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
TD +++ ++ I+Y +Y++LK L Y HS G++HRD+KP N+ ++ E+ +L+++D+
Sbjct: 112 QTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRHSRKRWER 364
GLA H E V +R+++ PE++ + ++ + + A++L + + +
Sbjct: 171 GLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228
Query: 365 FVHTENQHL--VSPEALDFLDKNILGRHSRKRWERFVHTENQHLV------SPEALDFLD 416
++ Q L +F+ K + + ++ + T + SP+A D L+
Sbjct: 229 YLDQLTQILKVTGVPGTEFVQK-LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 287
Query: 417 KLLRYDHYERLTAREAMDHPYFYP 440
K+L D +RLTA +A+ HP+F P
Sbjct: 288 KMLELDVDKRLTAAQALTHPFFEP 311
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ YCH ++HRD+KP N++I+ E +L++ D+GLA F P ++Y + + +++ P+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y ++D+WS+GC+ A M+ P F G DQL+RI ++LGT
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGT 219
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 32/235 (13%)
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT----LTDYDIRYYLYELLKALDYC 281
+NI+ L V+ + L+FEH++ D K+L L + +L +LL + YC
Sbjct: 60 SNIVKLYDVIH--TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LLAD 339
H ++HRD+KP N++I+ E +L++ D+GLA F P ++Y + + +++ P+ L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 340 YQYHIELD---------------PRFADILGRHSRKRWERFVHTEN-QHLVSPEALDFLD 383
+Y +D P F + R R + T N ++ + L D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 384 KNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
N + WE F+ ++ +D L K+L+ D +R+TA++A++H YF
Sbjct: 236 PN-FTVYEPLPWESFLKGLDE-----SGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS G++HRD+KP N+ ++ E+ +L+++D+GLA H E V +R+++ PE+
Sbjct: 156 GLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEV 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ + Y+ ++D+WS+GC++A M+ K F G D DQL +I KV G
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTGV 260
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 252 NTDFKQLY-QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
TD +++ ++ I+Y +Y++LK L Y HS G++HRD+KP N+ ++ E+ +L+++D+
Sbjct: 130 QTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-EDCELKILDF 188
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRHSRKRWER 364
GLA H E V +R+++ PE++ + ++ + + A++L + + +
Sbjct: 189 GLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246
Query: 365 FVHTENQHL--VSPEALDFLDKNILGRHSRKRWERFVHTENQHLV------SPEALDFLD 416
++ Q L +F+ K + + ++ + T + SP+A D L+
Sbjct: 247 YLDQLTQILKVTGVPGTEFVQK-LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305
Query: 417 KLLRYDHYERLTAREAMDHPYFYP 440
K+L D +RLTA +A+ HP+F P
Sbjct: 306 KMLELDVDKRLTAAQALTHPFFEP 329
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y H+ GI+HRD+KP N+ ++ E+ +L+++D+GLA E V +R+++ PE+
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVN-EDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y ++D+WS+GC++A MI K F G D+ DQL I KV GT
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKT-LFKGSDHLDQLKEIMKVTGT 244
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 32/209 (15%)
Query: 252 NTDFKQL--YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLID 309
TD +L ++ L + I++ +Y++LK L Y H+ GI+HRD+KP N+ + +E+ +L+++D
Sbjct: 113 GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV-NEDCELKILD 171
Query: 310 WGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADIL-------GR 356
+GLA E V +R+++ PE++ ++ + + + A+++ G
Sbjct: 172 FGLAR--QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
Query: 357 HSRKRWERFVHTEN-------QHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSP 409
+ + + Q L S EA +++ L +K + + SP
Sbjct: 230 DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG--LPELEKKDFASILTN-----ASP 282
Query: 410 EALDFLDKLLRYDHYERLTAREAMDHPYF 438
A++ L+K+L D +R+TA EA+ HPYF
Sbjct: 283 LAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 56/307 (18%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGG-- 225
G + YQ + K+G G Y V++A + Q +L
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 226 -TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY----QTLTDYDIRYYLYELLKALDY 280
NI++L V+ R L+FE + D K++ L D I+ YLY+LL+ + +
Sbjct: 78 HPNIVSLIDVIHS--ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LLA 338
CH I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P+ L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 339 DYQYHIELD---------------------------PRFADILGRHSRKRWERFVHTENQ 371
+Y +D P+ ILG + + W +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV------ 247
Query: 372 HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE 431
+ L + +K W + Q E +D L +L +D +R++AR+
Sbjct: 248 -----QELPLWKQRTFQVFEKKPWSSIIPGFCQ-----EGIDLLSNMLCFDPNKRISARD 297
Query: 432 AMDHPYF 438
AM+HPYF
Sbjct: 298 AMNHPYF 304
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ +CH I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P+
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y S+D+WS+GC+ A MI K P F G + DQL +I +LGT
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGT 238
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 56/307 (18%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGG-- 225
G + YQ + K+G G Y V++A + Q +L
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 226 -TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY----QTLTDYDIRYYLYELLKALDY 280
NI++L V+ R L+FE + D K++ L D I+ YLY+LL+ + +
Sbjct: 78 HPNIVSLIDVIHS--ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LLA 338
CH I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P+ L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 339 DYQYHIELD---------------------------PRFADILGRHSRKRWERFVHTENQ 371
+Y +D P+ ILG + + W +
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV------ 247
Query: 372 HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE 431
+ L + +K W + Q E +D L +L +D +R++AR+
Sbjct: 248 -----QELPLWKQRTFQVFEKKPWSSIIPGFCQ-----EGIDLLSNMLCFDPNKRISARD 297
Query: 432 AMDHPYF 438
AM+HPYF
Sbjct: 298 AMNHPYF 304
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
+ +CH I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P+
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y S+D+WS+GC+ A MI K P F G + DQL +I +LGT
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGT 238
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEI 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 169
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 170 ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 225
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEI 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 169
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 170 ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 225
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEI 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 169
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 170 ELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 225
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 195
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDS 164
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 165 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 220
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDX 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDX 167
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 168 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 223
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDX 167
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 168 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 223
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDS 168
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 169 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 224
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGXVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE 68
L +CH I+HRD+KP N++I+ +L+L D+GLA F P ++ V + +++ P+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRG-QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L + Y S+D+WS GC+LA MI K P F G ++ +QL I ++GT
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIMGT 227
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 37/297 (12%)
Query: 173 YQLVRKLGRGKYSEVFEAIN----VQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNI 228
++ + KLG G Y+ V++ +N V + ++ L+ NI
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH-ENI 65
Query: 229 ITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD---------IRYYLYELLKALD 279
+ L V+ T L+FE ++N D K+ + T + ++Y+ ++LL+ L
Sbjct: 66 VRLYDVIHTENKLT--LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-LL 337
+CH I+HRD+KP N++I+ +L+L D+GLA F P ++ V + +++ P+ L+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRG-QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLM 181
Query: 338 ADYQYHIELD---------------PRFADILGRHSRKRWERFVHTENQHL-VSPEALDF 381
Y +D P F K + T N+ L S L
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241
Query: 382 LDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ NI R R + + + + +DFL LL+ + RL+A++A+ HP+F
Sbjct: 242 YNPNIQQRPPRD-LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 204
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 252
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDX 173
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 174 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 229
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 287
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 288 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDYGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 195
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 164
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 165 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 220
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 167
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 168 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 223
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 192
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 240
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 161
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 162 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 217
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 218 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 275
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 276 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 203
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 251
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 114 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 172
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 173 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 228
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 229 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 286
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 287 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 169
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 170 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 225
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 283
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 284 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 205
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 174
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 175 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 230
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 205
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 174
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 175 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 230
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 238
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 159
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 160 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 215
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 273
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 274 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 195
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 164
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 165 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 220
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 205
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 174
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 175 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 230
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 288
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 289 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 158
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 159 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 214
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 272
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 167
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 168 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 223
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 281
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 282 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 195
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 164
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 165 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 220
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 278
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 279 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 238
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 159
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 160 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 215
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 273
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 274 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 191
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 239
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 160
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 161 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 216
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 217 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 274
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 275 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + + LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 100 LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 158
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 159 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 214
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 168
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 169 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 224
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 158
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 159 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 214
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 168
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 169 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 224
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 282
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 204
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 252
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 173
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 174 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 229
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 287
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 288 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 260
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 181
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 182 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 237
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 295
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 296 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMXGXVATRWYRAPEI 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 182
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 183 ELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 238
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 296
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 216
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 264
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 185
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 186 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 241
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 299
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 300 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 260
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 181
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 182 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 237
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 295
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 296 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 182
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 183 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 238
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 296
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 168
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 169 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 224
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 282
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 283 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 182
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 183 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 238
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 296
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 297 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMXGYVATRWYRAPEI 216
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 264
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 185
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 186 ELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 241
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 299
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 300 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GL H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDSELKILDFGLCR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDS 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GL H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLCR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 222
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ +QL +I ++ GT
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRT-LFPGTDHINQLQQIMRLTGT 270
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 54/325 (16%)
Query: 151 SHKPR-EYWDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXX 209
SHK R ++ E W + YQ + +G G Y V + +V+S
Sbjct: 30 SHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQ 89
Query: 210 XXXXXXXXXLENLR-----GGTNIITLQAVVKDPVSRTPALIFE---------HVNNTDF 255
E LR N+I L V TPA E H+ D
Sbjct: 90 SIIHAKRTYRE-LRLLKHMKHENVIGLLDVF------TPATSLEEFNDVYLVTHLMGADL 142
Query: 256 KQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA
Sbjct: 143 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLA 201
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQ-YHIELD-----PRFADIL-GR---------H 357
H E VA+R+++ PE++ ++ Y++ +D A++L GR +
Sbjct: 202 R--HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 358 SRKRWERFVHTENQHLVSP----EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALD 413
++ R T ++S EA +++ N L + ++ + N P A+D
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHEARNYI--NSLPQMPKRNFADVFIGAN-----PLAVD 312
Query: 414 FLDKLLRYDHYERLTAREAMDHPYF 438
L+K+L D +R+TA EA+ HPYF
Sbjct: 313 LLEKMLVLDTDKRITASEALAHPYF 337
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEI 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 158
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 159 ELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 214
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLAQMPKMNFANVFIG 272
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 273 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 149/328 (45%), Gaps = 70/328 (21%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXX-----XXXXXXXXXXXXXXXLENLRGGTN 227
Y+LV+KLG+G Y V+++I+ ++ + L L G N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMG 285
I+ L V++ R L+F+++ TD + + L +Y +Y+L+K + Y HS G
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 286 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR-------------------- 325
++HRD+KP N++++ E +++ D+GL+ + N+R
Sbjct: 130 LLHRDMKPSNILLNAECH-VKVADFGLSRSF-----VNIRRVTNNIPLSINENTENFDDD 183
Query: 326 -------VASRYFKGPELL---ADYQYHIE---LDPRFADIL-------GRHSRKRWERF 365
VA+R+++ PE+L Y I+ L +IL G + + ER
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 366 V-------HTENQHLVSPEA---LDFLDKNILGRHSRKR-----WERFVHTENQHL-VSP 409
+ + + + + SP A ++ L + + R S KR W+ + N +
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 410 EALDFLDKLLRYDHYERLTAREAMDHPY 437
EALD LDKLL+++ +R++A +A+ HP+
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPF 331
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 34/134 (25%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR----------- 58
+ Y HS G++HRD+KP N++++ E +++ D+GL+ + N+R
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECH-VKVADFGLSRSF-----VNIRRVTNNIPLSIN 174
Query: 59 ----------------VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 102
VA+R+++ PE+L Y +DMWSLGC+L ++ K P F G
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PIFPG 233
Query: 103 HDNYDQLVRIAKVL 116
+QL RI V+
Sbjct: 234 SSTMNQLERIIGVI 247
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDGGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDGGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ + Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+GLA H E VA+R+++ PE++ + ++ + + A++L
Sbjct: 163 ELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDAGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDAGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDRGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDRGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +D+WS+GC+ A M FR++P F G + DQL +I V+G
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 133/336 (39%), Gaps = 68/336 (20%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLR--------G 224
Y+ V ++G G Y +VF+A ++++ + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 225 GTNIITLQAVVKDPVSRTP-----ALIFEHVNNTDFKQLYQTLTDY------------DI 267
N++ L V VSRT L+FEHV+ Q LT Y I
Sbjct: 73 HPNVVRLFDVCT--VSRTDRETKLTLVFEHVD--------QDLTTYLDKVPEPGVPTETI 122
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
+ +++LL+ LD+ HS ++HRD+KP N+++ +++L D+GLA Y V
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVV 181
Query: 328 SRYFKGPELLADYQYHIELD-----PRFADILGRHSRKRWERFVHTENQHLVSPEALDFL 382
+ +++ PE+L Y +D FA++ R R V + L
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL--------- 232
Query: 383 DKNILGRHSRKRWERFVHTENQHLVSPEAL--------------DFLDKLLRYDHYERLT 428
+++G + W R V Q S A D L K L ++ +R++
Sbjct: 233 --DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Query: 429 AREAMDHPYFYPI--VKDQSRHTLPSSSPTPIVNSV 462
A A+ HPYF + K+ LP S T +N+
Sbjct: 291 AYSALSHPYFQDLERCKENLDSHLPPSQNTSELNTA 326
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +D+WS+GC+ A M FR++P F G + DQL +I V+G
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 66/310 (21%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLR--------G 224
Y+ V ++G G Y +VF+A ++++ + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 225 GTNIITLQAVVKDPVSRTP-----ALIFEHVNNTDFKQLYQTLTDY------------DI 267
N++ L V VSRT L+FEHV+ Q LT Y I
Sbjct: 73 HPNVVRLFDVCT--VSRTDRETKLTLVFEHVD--------QDLTTYLDKVPEPGVPTETI 122
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
+ +++LL+ LD+ HS ++HRD+KP N+++ +++L D+GLA Y V
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVV 181
Query: 328 SRYFKGPELLADYQYHIELD-----PRFADILGRHSRKRWERFVHTENQHLVSPEALDFL 382
+ +++ PE+L Y +D FA++ R R V + L
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL--------- 232
Query: 383 DKNILGRHSRKRWERFVHTENQHLVSPEAL--------------DFLDKLLRYDHYERLT 428
+++G + W R V Q S A D L K L ++ +R++
Sbjct: 233 --DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Query: 429 AREAMDHPYF 438
A A+ HPYF
Sbjct: 291 AYSALSHPYF 300
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +D+WS+GC+ A M FR++P F G + DQL +I V+G
Sbjct: 191 LLQSS-YATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 66/310 (21%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLR--------G 224
Y+ V ++G G Y +VF+A ++++ + +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 225 GTNIITLQAVVKDPVSRTP-----ALIFEHVNNTDFKQLYQTLTDY------------DI 267
N++ L V VSRT L+FEHV+ Q LT Y I
Sbjct: 73 HPNVVRLFDVCT--VSRTDRETKLTLVFEHVD--------QDLTTYLDKVPEPGVPTETI 122
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
+ +++LL+ LD+ HS ++HRD+KP N+++ +++L D+GLA Y V
Sbjct: 123 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVV 181
Query: 328 SRYFKGPELLADYQYHIELD-----PRFADILGRHSRKRWERFVHTENQHLVSPEALDFL 382
+ +++ PE+L Y +D FA++ R R V + L
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL--------- 232
Query: 383 DKNILGRHSRKRWERFVHTENQHLVSPEAL--------------DFLDKLLRYDHYERLT 428
+++G + W R V Q S A D L K L ++ +R++
Sbjct: 233 --DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS 290
Query: 429 AREAMDHPYF 438
A A+ HPYF
Sbjct: 291 AYSALSHPYF 300
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++I+ L++ D+GLA P ++ VA+R+++
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 266
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 34/219 (15%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
I + + TD +L Q L++ I Y+LY++L+ L Y HS ++HRD+KP N++I+
Sbjct: 123 IVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLIN-TTC 181
Query: 304 KLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLADYQYHIE------LDPRFADI 353
L++ D+GLA P ++ VA+R+++ PE++ + + + + + A++
Sbjct: 182 DLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 354 L-------GRHSRKRWERFV-------HTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
L G+H + + + +++ +A ++L L ++ W +
Sbjct: 242 LSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQS--LPSKTKVAWAKLF 299
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +ALD LD++L ++ +R+T EA+ HPY
Sbjct: 300 PKSDS-----KALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++ +GLA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILGFGLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++ +GLA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILGFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 123/252 (48%), Gaps = 35/252 (13%)
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQ----LYQTLTDYDIRYYLYELLKALDYC 281
NI+TL ++ S T L+FE+++ D KQ + ++++ +L++LL+ L YC
Sbjct: 60 ANIVTLHDIIHTEKSLT--LVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPE-LLAD 339
H ++HRD+KP N++I+ E +L+L D+GLA P + Y+ V + +++ P+ LL
Sbjct: 117 HRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
Y ++D + F + + E L F+ + ILG + + W +
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-----EQLHFIFR-ILGTPTEETWPGIL 229
Query: 400 HTEN-----------QHLVS------PEALDFLDKLLRYDHYERLTAREAMDHPYFYPIV 442
E + L+S + D L KLL+++ R++A +AM HP+F +
Sbjct: 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL- 288
Query: 443 KDQSRHTLPSSS 454
+ H LP ++
Sbjct: 289 -GERIHKLPDTT 299
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPE 68
L YCH ++HRD+KP N++I+ E +L+L D+GLA P + Y+ V + +++ P+
Sbjct: 112 GLAYCHRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+L Y +DMW +GC+ M + P F G +QL I ++LGT
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQLHFIFRILGT 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 30/180 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQ------EYNVRVAS 61
L Y HS ++HRD+KP N++++ EN +L++ D+G+A P + EY VA+
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEY---VAT 226
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
R+++ PEL+ Y ++D+WS+GC+ M+ R++ F G + QL I VLGT
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQLIMMVLGTP-- 283
Query: 122 FEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGR 181
P +G RV A + S PR+ +E+ D Q + LGR
Sbjct: 284 -----------SPAVIQAVGAERVRAYIQSLPPRQPVPWETVY----PGADRQALSLLGR 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYH 317
Q LT +RY+LY+LL+ L Y HS ++HRD+KP N++++ EN +L++ D+G+A
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTS 212
Query: 318 PGQ------EYNVRVASRYFKGPEL---LADYQYHIEL---DPRFADILGRHSRKRWERF 365
P + EY VA+R+++ PEL L +Y I+L F ++L R + +
Sbjct: 213 PAEHQYFMTEY---VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 269
Query: 366 VH----------TENQHLVSPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALD 413
VH T + ++ + + I R+ WE ++ +AL
Sbjct: 270 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR-----QALS 324
Query: 414 FLDKLLRYDHYERLTAREAMDHPYF 438
L ++LR++ R++A A+ HP+
Sbjct: 325 LLGRMLRFEPSARISAAAALRHPFL 349
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 6/115 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE 120
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+ E
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPE 246
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 140 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 339 D---YQYHIEL---DPRFADILGRHSRKRWERFVHTENQ---HLVSPEALDF-LDKNILG 388
+ Y I++ A++L + ++ N L SPE D N+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 389 RH--------SRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
R+ ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 30/180 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQ------EYNVRVAS 61
L Y HS ++HRD+KP N++++ EN +L++ D+G+A P + EY VA+
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEY---VAT 225
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
R+++ PEL+ Y ++D+WS+GC+ M+ R++ F G + QL I VLGT
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQLIMMVLGTP-- 282
Query: 122 FEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRKLGR 181
P +G RV A + S PR+ +E+ D Q + LGR
Sbjct: 283 -----------SPAVIQAVGAERVRAYIQSLPPRQPVPWETVY----PGADRQALSLLGR 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYH 317
Q LT +RY+LY+LL+ L Y HS ++HRD+KP N++++ EN +L++ D+G+A
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTS 211
Query: 318 PGQ------EYNVRVASRYFKGPEL---LADYQYHIEL---DPRFADILGRHSRKRWERF 365
P + EY VA+R+++ PEL L +Y I+L F ++L R + +
Sbjct: 212 PAEHQYFMTEY---VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 268
Query: 366 VH----------TENQHLVSPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALD 413
VH T + ++ + + I R+ WE ++ +AL
Sbjct: 269 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR-----QALS 323
Query: 414 FLDKLLRYDHYERLTAREAMDHPYF 438
L ++LR++ R++A A+ HP+
Sbjct: 324 LLGRMLRFEPSARISAAAALRHPFL 348
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
L Y HS I+HRD+KP N+ ++ E+ +L+++D+ LA H E VA+R+++ PE+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFYLAR--HTDDEMTGYVATRWYRAPEI 193
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ ++ Y+ ++D+WS+GC++A ++ + F G D+ DQL I +++GT
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 246 IFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ H+ D + Q LTD +++ +Y++L+ L Y HS I+HRD+KP N+ ++ E+
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDC 162
Query: 304 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIE------LDPRFADILGRH 357
+L+++D+ LA H E VA+R+++ PE++ ++ ++ + + A++L
Sbjct: 163 ELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-- 218
Query: 358 SRKRWERFVHTENQHLV-----SPEALDFLDKNILGRHSRKRWERFVHTENQHL------ 406
R + H + L+ +P A L K I +R + +
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGA--ELLKKISSESARNYIQSLTQMPKMNFANVFIG 276
Query: 407 VSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+P A+D L+K+L D +R+TA +A+ H YF
Sbjct: 277 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 246
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 261 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 248
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 32/238 (13%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 339 D---YQYHIEL---DPRFADILGRHSRKRWERFVHTENQ---HLVSPEALDF-LDKNILG 388
+ Y I++ A++L + ++ N L SP D N+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 389 RH--------SRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
R+ ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 251
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 147 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 266 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 246
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 261 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P + H+ D +L +T L++ I Y+LY++L+ L Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 162 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 281 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 246
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 261 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y + V + +++ PE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +DMWS+GC+ A M FR++P F G+ DQL +I ++G
Sbjct: 183 LLQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 31/217 (14%)
Query: 244 ALIFEHVNNTDF-----KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI 298
L+FEHV+ D K L I+ + + L+ LD+ H+ I+HRD+KP N+++
Sbjct: 87 TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 145
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHS 358
++L D+GLA Y + V + +++ PE+L Y +D +
Sbjct: 146 T-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 359 RKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFVHTENQHL---------- 406
+R F D L K +++G W R V
Sbjct: 205 FRRKPLFCGNSEA--------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS 256
Query: 407 VSPE----ALDFLDKLLRYDHYERLTAREAMDHPYFY 439
V PE L ++L ++ ++R++A A+ H Y +
Sbjct: 257 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 246
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 261 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 251
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 147 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 266 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 248
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 263 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 252
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 148 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 267 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 243
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 139 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 258 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYN----VRVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+
Sbjct: 132 GLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +DMWS+GC+ A M FR++P F G+ DQL +I ++G
Sbjct: 191 LLQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 236
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 31/217 (14%)
Query: 244 ALIFEHVNNTDF-----KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI 298
L+FEHV+ D K L I+ + + L+ LD+ H+ I+HRD+KP N+++
Sbjct: 95 TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 153
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHS 358
++L D+GLA Y V + +++ PE+L Y +D +
Sbjct: 154 T-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
Query: 359 RKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFVHTENQHL---------- 406
+R F D L K +++G W R V
Sbjct: 213 FRRKPLFCGNSEA--------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS 264
Query: 407 VSPE----ALDFLDKLLRYDHYERLTAREAMDHPYFY 439
V PE L ++L ++ ++R++A A+ H Y +
Sbjct: 265 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 244
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 140 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 259 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 254
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 150 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 269 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 246
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 261 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 248
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 263 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 266
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L +T L++ I Y+LY++L+ L Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 162 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 281 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
L Y HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
PE++ + + Y S+D+WS+GC+LA M+ + P F G DQL I +LG+
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGS 250
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 117/240 (48%), Gaps = 36/240 (15%)
Query: 227 NIITLQAVVKDPV--SRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCH 282
NII + +++ P I + + TD +L Q L++ I Y+LY++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY----NVRVASRYFKGPELLA 338
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 339 D---YQYHIEL---DPRFADIL-------GRHSRKRWERFV-------HTENQHLVSPEA 378
+ Y I++ A++L G+H + + + +++ +A
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
++L L ++ W R + +ALD LDK+L ++ ++R+ +A+ HPY
Sbjct: 265 RNYLLS--LPHKNKVPWNRLFPNADS-----KALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +DMWS+GC+ A M FR++P F G+ DQL +I ++G
Sbjct: 183 LLQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 31/217 (14%)
Query: 244 ALIFEHVNNTDF-----KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI 298
L+FEHV+ D K L I+ + + L+ LD+ H+ I+HRD+KP N+++
Sbjct: 87 TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 145
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHS 358
++L D+GLA Y V + +++ PE+L Y +D +
Sbjct: 146 T-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 359 RKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFVHTENQHL---------- 406
+R F D L K +++G W R V
Sbjct: 205 FRRKPLFCGNSEA--------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS 256
Query: 407 VSPE----ALDFLDKLLRYDHYERLTAREAMDHPYFY 439
V PE L ++L ++ ++R++A A+ H Y +
Sbjct: 257 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID----HENRKLRLIDWGLAE-FYHPGQEYNVRVASRYF 64
+++CHS +HRD+KP N+++ E L++ D+GLA F P +++ + + ++
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
+ PE+L + Y S+D+WS+ C+ A M+ K P F G DQL +I +VLG
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLG 255
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXX-----XXXXXXXXXXXXXXXLENLRGG 225
D Y+ + KLG G Y EV++AI+ +++ L+ L+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH- 92
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRY---YLYELLKALDYCH 282
NII L++V+ + LIFE+ N D K+ D +R +LY+L+ +++CH
Sbjct: 93 RNIIELKSVIHH--NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 283 SMGIMHRDVKPHNVMID----HENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPE-L 336
S +HRD+KP N+++ E L++ D+GLA F P +++ + + +++ PE L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 337 LADYQYHIELD 347
L Y +D
Sbjct: 210 LGSRHYSTSVD 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPE 68
A+++CH +HRDVKP N++I ++ ++L D+G A P Y+ VA+R+++ PE
Sbjct: 114 AVNFCHKHNCIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE 172
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
LL Y +D+W++GC+ A ++ P + G + DQL I K LG
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLG 220
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 52/303 (17%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXX-----XXXXXXXXXXLENLRGG 225
+ Y+ + K+G G Y VF+ N + L+ L+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH- 61
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQL--YQ-TLTDYDIRYYLYELLKALDYCH 282
N++ L V + R L+FE+ ++T +L YQ + ++ ++ ++ L+A+++CH
Sbjct: 62 PNLVNLLEVFRR--KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELL-ADY 340
+HRDVKP N++I ++ ++L D+G A P Y+ VA+R+++ PELL D
Sbjct: 120 KHNCIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 341 QYHIELD-----PRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRW 395
QY +D FA++L W + +L+ D ++ RH +
Sbjct: 179 QYGPPVDVWAIGCVFAELLS--GVPLWPGKSDVDQLYLIRKTLGD-----LIPRHQQ--- 228
Query: 396 ERFVHTENQHL--------------------VSPEALDFLDKLLRYDHYERLTAREAMDH 435
V + NQ+ +S AL L L D ERLT + + H
Sbjct: 229 ---VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285
Query: 436 PYF 438
PYF
Sbjct: 286 PYF 288
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
L Y +DMWS+GC+ A M FR++P F G+ DQL +I ++G
Sbjct: 183 LLQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 31/217 (14%)
Query: 244 ALIFEHVNNTDF-----KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI 298
L+FEHV+ D K L I+ + + L+ LD+ H+ I+HRD+KP N+++
Sbjct: 87 TLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 145
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHS 358
++L D+GLA Y V + +++ PE+L Y +D +
Sbjct: 146 T-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
Query: 359 RKRWERFVHTENQHLVSPEALDFLDK--NILGRHSRKRWERFVHTENQHL---------- 406
+R F D L K +++G W R V
Sbjct: 205 FRRKPLFCGNSEA--------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQS 256
Query: 407 VSPE----ALDFLDKLLRYDHYERLTAREAMDHPYFY 439
V PE L ++L ++ ++R++A A+ H Y +
Sbjct: 257 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH---------PGQEYNVR-- 58
A+ H ++HRD+KP N++I+ N L++ D+GLA GQ+ +
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 59 VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
VA+R+++ PE++ Y ++D+WS GC+LA + R+ P F G D QL+ I ++GT
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 42/227 (18%)
Query: 246 IFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
I + + TD ++ T L+D I+Y++Y+ L+A+ H ++HRD+KP N++I+ N
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SNC 149
Query: 304 KLRLIDWGLAEFYH---------PGQEYNVR--VASRYFKGPE-LLADYQYHIELD---- 347
L++ D+GLA GQ+ + VA+R+++ PE +L +Y +D
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 348 -----------PRFADILGRHSRKRWERFV---HTEN--QHLVSPEALDFLDKNILGRHS 391
P F RH + H++N + + SP A +++ L +
Sbjct: 210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS--LPMYP 267
Query: 392 RKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
E+ V+P+ +D L ++L +D +R+TA+EA++HPY
Sbjct: 268 AAPLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH---------PGQEYNVR-- 58
A+ H ++HRD+KP N++I+ N L++ D+GLA GQ+ +
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 59 VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
VA+R+++ PE++ Y ++D+WS GC+LA + R+ P F G D QL+ I ++GT
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 42/227 (18%)
Query: 246 IFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
I + + TD ++ T L+D I+Y++Y+ L+A+ H ++HRD+KP N++I+ N
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SNC 149
Query: 304 KLRLIDWGLAEFYH---------PGQEYNVR--VASRYFKGPE-LLADYQYHIELD---- 347
L++ D+GLA GQ+ + VA+R+++ PE +L +Y +D
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 348 -----------PRFADILGRHSRKRWERFV---HTEN--QHLVSPEALDFLDKNILGRHS 391
P F RH + H++N + + SP A +++ L +
Sbjct: 210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS--LPMYP 267
Query: 392 RKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
E+ V+P+ +D L ++L +D +R+TA+EA++HPY
Sbjct: 268 AAPLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 13/120 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH---------PGQEYNVR-- 58
A+ H ++HRD+KP N++I+ N L++ D+GLA GQ+ +
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 59 VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
VA+R+++ PE++ Y ++D+WS GC+LA + R+ P F G D QL+ I ++GT
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 42/227 (18%)
Query: 246 IFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
I + + TD ++ T L+D I+Y++Y+ L+A+ H ++HRD+KP N++I+ N
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-SNC 149
Query: 304 KLRLIDWGLAEFYH---------PGQEYNVR--VASRYFKGPE-LLADYQYHIELD---- 347
L++ D+GLA GQ+ + VA+R+++ PE +L +Y +D
Sbjct: 150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC 209
Query: 348 -----------PRFADILGRHSRKRWERFV---HTEN--QHLVSPEALDFLDKNILGRHS 391
P F RH + H++N + + SP A +++ L +
Sbjct: 210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS--LPMYP 267
Query: 392 RKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
E+ V+P+ +D L ++L +D +R+TA+EA++HPY
Sbjct: 268 AAPLEKMFPR-----VNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L H G++HRD+ P N+++ +N + + D+ LA V R+++ PE
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
L+ ++ + +DMWS GC++A M F ++ F G Y+QL +I +V+GT ++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 253 TDFKQLYQ----TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLI 308
TD Q+ ++ I+Y++Y +L L H G++HRD+ P N+++ +N + +
Sbjct: 118 TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITIC 176
Query: 309 DWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIEL------DPRFADILGRHSRKRW 362
D+ LA V R+++ PEL+ ++ +L A++ R + R
Sbjct: 177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 363 ERFVHTENQ--------------HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVS 408
F + N+ SP A D+L +N L + W V T +
Sbjct: 237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYL-RNSLSNVPARAWTAVVPTAD----- 290
Query: 409 PEALDFLDKLLRYDHYERLTAREAMDHPYF 438
P ALD + K+L ++ R++ +A+ HPYF
Sbjct: 291 PVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L H G++HRD+ P N+++ +N + + D+ LA V R+++ PE
Sbjct: 145 LGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADANKTHYVTHRWYRAPE 203
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
L+ ++ + +DMWS GC++A M F ++ F G Y+QL +I +V+GT ++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 253 TDFKQLYQ----TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLI 308
TD Q+ ++ I+Y++Y +L L H G++HRD+ P N+++ +N + +
Sbjct: 118 TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITIC 176
Query: 309 DWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIEL------DPRFADILGRHSRKRW 362
D+ LA V R+++ PEL+ ++ +L A++ R + R
Sbjct: 177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 363 ERFVHTENQ--------------HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVS 408
F + N+ SP A D+L +N L + W V T +
Sbjct: 237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYL-RNSLSNVPARAWTAVVPTAD----- 290
Query: 409 PEALDFLDKLLRYDHYERLTAREAMDHPYF 438
P ALD + K+L ++ R++ +A+ HPYF
Sbjct: 291 PVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD 126
++ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 127 ---KYHIELDPRFA 137
+ ++E P++A
Sbjct: 254 PTVRTYVENRPKYA 267
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 255 TVRNYVENRPKYAGL 269
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 17 MGIMHRDVKPHNVMIDHENRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQM 75
+ I+H D+KP N+++ + R ++++D+G + GQ + SR+++ PE+L
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMP- 215
Query: 76 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
YD ++DMWSLGC+L M EP F G + DQ+ +I +VLG
Sbjct: 216 YDLAIDMWSLGCILVEM-HTGEPLFSGANEVDQMNKIVEVLG 256
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 246 IFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHS--MGIMHRDVKPHNVMIDHENR 303
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 123 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 178
Query: 304 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++++D+G + GQ + SR+++ PE+L Y + +D
Sbjct: 179 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAID 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E PE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 255 TVRNYVENRPKYAGL 269
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 255 TVRNYVENRPKYAGL 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 17 MGIMHRDVKPHNVMIDHENRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQM 75
+ I+H D+KP N+++ + R ++++D+G + GQ + SR+++ PE+L
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMP- 234
Query: 76 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
YD ++DMWSLGC+L M EP F G + DQ+ +I +VLG
Sbjct: 235 YDLAIDMWSLGCILVEM-HTGEPLFSGANEVDQMNKIVEVLG 275
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 246 IFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHS--MGIMHRDVKPHNVMIDHENR 303
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 304 K-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++++D+G + GQ + SR+++ PE+L Y + +D
Sbjct: 198 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAID 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 255 TVRNYVENRPKYAGL 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 190 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 248 TVRNYVENRPKYAGL 262
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 105 DANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDF 163
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 224 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 17 MGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQM 75
+ I+H D+KP N+++ + R ++++D+G + GQ + SR+++ PE+L
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMP- 234
Query: 76 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
YD ++DMWSLGC+L M EP F G + DQ+ +I +VLG
Sbjct: 235 YDLAIDMWSLGCILVEM-HTGEPLFSGANEVDQMNKIVEVLG 275
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 246 IFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHS--MGIMHRDVKPHNVMIDHENR 303
+++ + NT+F+ + LT R + ++ AL + + + I+H D+KP N+++ + R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 304 -KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++++D+G + GQ + SR+++ PE+L Y + +D
Sbjct: 198 XAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYDLAID 240
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D ++ G +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD 126
++ Y ++D+WS+G ++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 196 VILGMG-YKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 127 ---KYHIELDPRFA 137
+ ++E P++A
Sbjct: 254 PTVRTYVENRPKYA 267
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D ++ G +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD 126
++ Y ++D+WS+G ++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 196 VILGMG-YKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 127 ---KYHIELDPRFA 137
+ ++E P++A
Sbjct: 254 PTVRTYVENRPKYA 267
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ K F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D + GR +W + + E PE + L +
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 235 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 291
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 292 PTVRNYVENRPKYAGL 307
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDF 208
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 209 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 269 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 36/197 (18%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R ++Y+LL+ L Y HS ++HRD+KP N+ I+ E+ L++ D+GLA P + ++
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 328 ----SRYFKGPELLA---DYQYHIEL---DPRFADIL-------GRHSRKRWERF----- 365
+++++ P LL +Y I++ FA++L G H ++ +
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 366 -VHTEN-QHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL--VSPEALDFLDKLLRY 421
VH E+ Q L+S ++ + R Q L +S EA+DFL+++L +
Sbjct: 243 VVHEEDRQELLS----------VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTF 292
Query: 422 DHYERLTAREAMDHPYF 438
+RLTA EA+ HPY
Sbjct: 293 SPMDRLTAEEALSHPYM 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA----SRYFK 65
L Y HS ++HRD+KP N+ I+ E+ L++ D+GLA P + ++ +++++
Sbjct: 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYR 191
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
P LL Y ++DMW+ GC+ A M+ K F H+
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 254
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 255 PTVRNYVENRPKYAGL 270
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 171
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 172 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 232 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 289
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 290 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 196 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 252
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 253 PTVRNYVENRPKYAGL 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 111 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 169
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 170 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 229
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 230 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 287
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 288 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 253
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 254 PTVRNYVENRPKYAGL 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 235 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 291
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 292 PTVRNYVENRPKYAGL 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 208
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 209 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 269 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 254
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 255 PTVRNYVENRPKYAGL 270
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 171
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 172 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 232 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 289
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 290 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFADI 139
+ ++E P++A +
Sbjct: 255 TVRNYVENRPKYAGL 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 170
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 231 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 288
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 289 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 190 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 246
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 247 PTVRNYVENRPKYAGL 262
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 105 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 163
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 224 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 191 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 247
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 248 PTVRNYVENRPKYAGL 263
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 164
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 165 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 225 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 282
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 283 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y ++D+WS+GC++ M+ K F G D DQ ++ + LGT
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 243
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D + GR +W + + E P + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI--EQLGTPCPAFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 10/136 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY- 128
+ Y ++D+WS+GC++ M+ R + F G D DQ ++ + LGT E++ K
Sbjct: 191 ILGMG-YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT-PCPEFMKKLQ 247
Query: 129 -----HIELDPRFADI 139
++E P++A +
Sbjct: 248 PTVRNYVENRPKYAGL 263
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 252 NTDFKQLYQTLTDYD-IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
+ + Q+ Q D++ + Y LY++L + + HS GI+HRD+KP N+++ + L+++D+
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDF 164
Query: 311 GLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKR-------- 361
GLA V +RY++ PE++ Y +D I+G R +
Sbjct: 165 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
Query: 362 ---WERFVHTENQHLVSPEALDFLDKNILG-RHSRKRWERFVH------------TENQH 405
W + + E PE + L + +R ++ +E+
Sbjct: 225 IDQWNKVI--EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 282
Query: 406 LVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L + +A D L K+L D +R++ +A+ HPY
Sbjct: 283 LKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 256 TVRTYVENRPKYA 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 84 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 140
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E PE + L +
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQPTV 257
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 317
Query: 434 DHPYF 438
HPY
Sbjct: 318 QHPYI 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E SPE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 255 TVRTYVENRPKYA 267
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 83 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 139
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E PE + L +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQPTV 256
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 434 DHPYF 438
HPY
Sbjct: 317 QHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ M+ K F G D DQ ++ + LGT E + L
Sbjct: 202 ILGMG-YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 259
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 260 TVRTYVENRPKYA 272
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 88 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 144
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 203
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D + GR +W + + E PE + L +
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQPTV 261
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 262 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 321
Query: 434 DHPYF 438
HPY
Sbjct: 322 QHPYI 326
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y ++D+WS+GC++ ++ + F G D+ DQ ++ + LGT
Sbjct: 195 ILGMG-YKENVDIWSVGCIMGELV-KGSVIFQGTDHIDQWNKVIEQLGT 241
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ E ++ + ++ L + Y LY++L + + HS GI+HRD+KP N+++ +
Sbjct: 104 LVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-T 162
Query: 305 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRK--- 360
L+++D+GLA V +RY++ PE++ Y +D I+G +
Sbjct: 163 LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 222
Query: 361 --------RWERFVH------TENQHLVSPEALDFLDK-----NILGRHSRKRWERFVHT 401
+W + + E + P ++++ I W +
Sbjct: 223 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSES 282
Query: 402 ENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
E + + +A D L K+L D +R++ EA+ HPY
Sbjct: 283 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y ++D+WS+GC++ M+ K F G D DQ ++ + LGT
Sbjct: 191 ILGMG-YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 237
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 77 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 133
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 339 DYQYHIELDPRFADIL------------GRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
Y +D + GR +W + + E PE + L +
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQPTV 250
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 251 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 310
Query: 434 DHPYF 438
HPY
Sbjct: 311 QHPYI 315
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EELFEYLD- 126
+ Y ++D+WS+GC++ MI + F G D+ DQ ++ + LGT E + L
Sbjct: 199 ILGMG-YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 256
Query: 127 --KYHIELDPRFA 137
+ ++E P++A
Sbjct: 257 TVRTYVENRPKYA 269
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 220 ENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD-IRYYLYELLKAL 278
+N+ G N+ T Q +++ I + + + Q+ Q D++ + Y LY++L +
Sbjct: 85 KNIIGLLNVFTPQKSLEE---FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGI 141
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA 338
+ HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE++
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 339 DYQYHIELDP-RFADILGRHSRK-----------RWERFVHTENQHLVSPEALDFLDKNI 386
Y +D I+G + +W + + E PE + L +
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQPTV 258
Query: 387 LG------RHSRKRWERF-------VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAM 433
+++ +E+ +E+ L + +A D L K+L D +R++ EA+
Sbjct: 259 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 318
Query: 434 DHPYF 438
HPY
Sbjct: 319 QHPYI 323
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
LD H I+H D+KP N+++ + R +++ID+G + + H Q + SR+++ PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPE 269
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
++ + Y +DMWSLGC+LA ++ P G D DQL + ++LG
Sbjct: 270 VILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 256 KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAE 314
K +Q + +R + + +L+ LD H I+H D+KP N+++ + R +++ID+G +
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 315 FYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+ H Q + SR+++ PE++ +Y + +D
Sbjct: 251 YEH--QRVYTXIQSRFYRAPEVILGARYGMPID 281
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
LD H I+H D+KP N+++ + R +++ID+G + + H Q + SR+++ PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPE 269
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
++ + Y +DMWSLGC+LA ++ P G D DQL + ++LG
Sbjct: 270 VILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 256 KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAE 314
K +Q + +R + + +L+ LD H I+H D+KP N+++ + R +++ID+G +
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 315 FYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+ H Q + SR+++ PE++ +Y + +D
Sbjct: 251 YEH--QRVYTXIQSRFYRAPEVILGARYGMPID 281
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
LD H I+H D+KP N+++ + R +++ID+G + + H Q + SR+++ PE
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYXXIQSRFYRAPE 269
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 117
++ + Y +DMWSLGC+LA ++ P G D DQL + ++LG
Sbjct: 270 VILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 256 KQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK-LRLIDWGLAE 314
K +Q + +R + + +L+ LD H I+H D+KP N+++ + R +++ID+G +
Sbjct: 191 KNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Query: 315 FYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+ H Q + SR+++ PE++ +Y + +D
Sbjct: 251 YEH--QRVYXXIQSRFYRAPEVILGARYGMPID 281
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
+ + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 118
+ Y ++D+WS+GC++ ++ + F G D+ DQ ++ + LGT
Sbjct: 197 ILGMG-YAANVDIWSVGCIMGELV-KGCVIFQGTDHIDQWNKVIEQLGT 243
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 24/217 (11%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ E ++ + ++ L + Y LY++L + + HS GI+HRD+KP N+++ +
Sbjct: 106 LVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC-T 164
Query: 305 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRK--- 360
L+++D+GLA V +RY++ PE++ Y +D I+G +
Sbjct: 165 LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVI 224
Query: 361 --------RWERFVH------TENQHLVSPEALDFLDK-----NILGRHSRKRWERFVHT 401
+W + + E + P ++++ I W +
Sbjct: 225 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSES 284
Query: 402 ENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
E + + +A D L K+L D +R++ EA+ HPY
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYF 64
L Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + ++
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELF 122
+ PELL + Y +D+W GC++A M + + P G+ QL I+++ G T E++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 123 EYLDKYHIELDPRFADILGRARVYAD 148
+D Y EL + + G+ R D
Sbjct: 255 PNVDNY--ELYEKLELVKGQKRKVKD 278
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 41/303 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 228
Y+ + K+G+G + EVF+A + ++ E L N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 229 ITLQAVVK---DPVSRTPALIF------EHVNNTDFKQLYQTLTDYDIRYYLYELLKALD 279
+ L + + P +R I+ EH + T +I+ + LL L
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGP 334
Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + +++ P
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 335 ELL-ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHL----------VSPEALDFLD 383
ELL + Y +D A + R QH ++PE +D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 384 K-------NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ RK +R ++ P ALD +DKLL D +R+ + +A++H
Sbjct: 259 NYELYEKLELVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 437 YFY 439
+F+
Sbjct: 315 FFW 317
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMI--DHENRKLRLIDWGLAEFYHPGQEYNVRV 59
RI A+ YCH + + HRD+KP N + D + L+LID+GLA + PG+ +V
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 186
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ P++L +Y D WS G M+ ++ PF D + +++I E
Sbjct: 187 GTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDX-EVMLKI-----RE 238
Query: 120 ELFEYLDKYHIELDPRFADILGR 142
F + +K + + P+ ++ R
Sbjct: 239 GTFTFPEKDWLNVSPQAESLIRR 261
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI--DHENRKLRLIDWGLAEFYHPGQE 321
+ D + ++L A+ YCH + + HRD+KP N + D + L+LID+GLA + PG+
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 322 YNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDF 381
+V + Y+ P++L Y E D W V P
Sbjct: 182 MRTKVGTPYYVSPQVLEGL-YGPECD-------------EWSAGVMMYVLLCGYPPFSAP 227
Query: 382 LDKNILGRHSRKRWERFVHTENQHL-VSPEALDFLDKLLRYDHYERLTAREAMDHPYFYP 440
D ++ + R F E L VSP+A + +LL +R+T+ +A++H +F
Sbjct: 228 TDXEVM---LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
Query: 441 IVKDQSRHTL 450
+ R+ L
Sbjct: 285 QLSSSPRNLL 294
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMI--DHENRKLRLIDWGLAEFYHPGQEYNVRV 59
RI A+ YCH + + HRD+KP N + D + L+LID+GLA + PG+ +V
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 169
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ P++L +Y D WS G M+ ++ PF D + +++I E
Sbjct: 170 GTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDX-EVMLKI-----RE 221
Query: 120 ELFEYLDKYHIELDPRFADILGR 142
F + +K + + P+ ++ R
Sbjct: 222 GTFTFPEKDWLNVSPQAESLIRR 244
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI--DHENRKLRLIDWGLAEFYHPGQE 321
+ D + ++L A+ YCH + + HRD+KP N + D + L+LID+GLA + PG+
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 322 YNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDF 381
+V + Y+ P++L Y E D A ++ + F + ++
Sbjct: 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM------- 216
Query: 382 LDKNILGRHSRKRWERFVHTENQHL-VSPEALDFLDKLLRYDHYERLTAREAMDHPYFYP 440
+ R F E L VSP+A + +LL +R+T+ +A++H +F
Sbjct: 217 ---------LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
Query: 441 IVKDQSRHTL 450
+ R+ L
Sbjct: 268 QLSSSPRNLL 277
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYF 64
L Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + ++
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELF 122
+ PELL + Y +D+W GC++A M + + P G+ QL I+++ G T E++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 123 EYLDKYHIELDPRFADILGRARVYAD 148
+D Y EL + + G+ R D
Sbjct: 255 PNVDNY--ELYEKLELVKGQKRKVKD 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 122/303 (40%), Gaps = 41/303 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 228
Y+ + K+G+G + EVF+A + ++ E L N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 229 ITLQAVVK---DPVSRTPALIF------EHVNNTDFKQLYQTLTDYDIRYYLYELLKALD 279
+ L + + P +R A I+ EH + T +I+ + LL L
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGP 334
Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + +++ P
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 335 ELL-ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHL----------VSPEALDFLD 383
ELL + Y +D A + R QH ++PE +D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 384 K-------NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ RK +R ++ P ALD +DKLL D +R+ + +A++H
Sbjct: 259 NYELYEKLELVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 437 YFY 439
+F+
Sbjct: 315 FFW 317
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYF 64
L Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + ++
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELF 122
+ PELL + Y +D+W GC++A M + + P G+ QL I+++ G T E++
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 123 EYLDKYHIELDPRFADILGRARVYAD 148
+D Y EL + + G+ R D
Sbjct: 255 PNVDNY--ELYEKLELVKGQKRKVKD 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 41/303 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 228
Y+ + K+G+G + EVF+A + ++ E L N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 229 ITLQAVVK---DPVSRTPALIF------EHVNNTDFKQLYQTLTDYDIRYYLYELLKALD 279
+ L + + P +R I+ EH + T +I+ + LL L
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGP 334
Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + +++ P
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 335 ELL-ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHL----------VSPEALDFLD 383
ELL + Y +D A + R QH ++PE +D
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 384 K-------NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ RK +R ++ P ALD +DKLL D +R+ + +A++H
Sbjct: 259 NYELYEKLELVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 437 YFY 439
+F+
Sbjct: 315 FFW 317
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYF 64
L Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + ++
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELF 122
+ PELL + Y +D+W GC++A M + + P G+ QL I+++ G T E++
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 123 EYLDKYHIELDPRFADILGRARVYAD 148
+D Y EL + + G+ R D
Sbjct: 254 PNVDNY--ELYEKLELVKGQKRKVKD 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 121/303 (39%), Gaps = 41/303 (13%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTNI 228
Y+ + K+G+G + EVF+A + ++ E L N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 229 ITLQAVVK---DPVSRTPALIF------EHVNNTDFKQLYQTLTDYDIRYYLYELLKALD 279
+ L + + P +R I+ EH + T +I+ + LL L
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGP 334
Y H I+HRD+K NV+I + L+L D+GLA + + Y RV + +++ P
Sbjct: 139 YIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 335 ELL-ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHL----------VSPEALDFLD 383
ELL + Y +D A + R QH ++PE +D
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 384 K-------NILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ RK +R ++ P ALD +DKLL D +R+ + +A++H
Sbjct: 258 NYELYEKLELVKGQKRKVKDRL----KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 437 YFY 439
+F+
Sbjct: 314 FFW 316
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ +++ +R+ID+GL+ + ++ ++
Sbjct: 130 RIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ PE+L + YD D+WS G +L ++ P F+G + YD L ++ K T
Sbjct: 190 GTAYYIAPEVL--HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTF 246
Query: 120 EL 121
EL
Sbjct: 247 EL 248
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 32/200 (16%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
++ D + ++L + Y H I+HRD+KP N++++ +++ +R+ID+GL+ +
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV-----HTENQHLV 374
++ ++ + Y+ PE+L H D + D+ W V +
Sbjct: 183 KKXKDKIGTAYYIAPEVL-----HGTYDEK-CDV--------WSTGVILYILLSGCPPFN 228
Query: 375 SPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
D L K G+++ + +W++ VS A D + K L Y R++AR+A
Sbjct: 229 GANEYDILKKVEKGKYTFELPQWKK---------VSESAKDLIRKXLTYVPSXRISARDA 279
Query: 433 MDHPYFYPIVKDQSRHTLPS 452
+DH + K+Q +PS
Sbjct: 280 LDHEWIQTYTKEQISVDVPS 299
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
+ Y+ PE+L YD D+WS G +L ++ P F+G + YD L R+
Sbjct: 185 GTAYYIAPEVLRG--TYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 31/205 (15%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
+++D + ++ + Y H I+HRD+KP N++++ + + +++ID+GL+ +
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ R+ + Y+ PE+L Y + D A ++ +++
Sbjct: 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVI----------------LYILLSGTP 220
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
F KN R ++ Q +S +A D + K+L + R+TA + ++HP+
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Query: 439 YPIVKDQSRHTLPSSSPTPIVNSVP 463
SS TP ++ +P
Sbjct: 281 QKY-----------SSETPTISDLP 294
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ +++ +R+ID+GL+ + ++ ++
Sbjct: 136 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 195
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ PE+L + YD D+WS G +L ++ P F+G + YD L ++ K T
Sbjct: 196 GTAYYIAPEVL--HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTF 252
Query: 120 EL 121
EL
Sbjct: 253 EL 254
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
++ D + ++L + Y H I+HRD+KP N++++ +++ +R+ID+GL+ +
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 188
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV-----HTENQHLV 374
++ ++ + Y+ PE+L H D + D+ W V +
Sbjct: 189 KKMKDKIGTAYYIAPEVL-----HGTYDEK-CDV--------WSTGVILYILLSGCPPFN 234
Query: 375 SPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
D L K G+++ + +W++ VS A D + K+L Y R++AR+A
Sbjct: 235 GANEYDILKKVEKGKYTFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDA 285
Query: 433 MDHPYFYPIVKDQ 445
+DH + K+Q
Sbjct: 286 LDHEWIQTYTKEQ 298
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ +++ +R+ID+GL+ + ++ ++
Sbjct: 130 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 189
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ PE+L + YD D+WS G +L ++ P F+G + YD L ++ K T
Sbjct: 190 GTAYYIAPEVL--HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTF 246
Query: 120 EL 121
EL
Sbjct: 247 EL 248
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
++ D + ++L + Y H I+HRD+KP N++++ +++ +R+ID+GL+ +
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV-----HTENQHLV 374
++ ++ + Y+ PE+L H D + D+ W V +
Sbjct: 183 KKMKDKIGTAYYIAPEVL-----HGTYDEK-CDV--------WSTGVILYILLSGCPPFN 228
Query: 375 SPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
D L K G+++ + +W++ VS A D + K+L Y R++AR+A
Sbjct: 229 GANEYDILKKVEKGKYTFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDA 279
Query: 433 MDHPYFYPIVKDQSRHTLPS 452
+DH + K+Q +PS
Sbjct: 280 LDHEWIQTYTKEQISVDVPS 299
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
+ Y+ PE+L YD D+WS G +L ++ P F+G + YD L R+
Sbjct: 185 GTAYYIAPEVLRG--TYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
+++D + ++ + Y H I+HRD+KP N++++ + + +++ID+GL+ +
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ R+ + Y+ PE+L Y + D A ++ +++
Sbjct: 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVI----------------LYILLSGTP 220
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
F KN R ++ Q +S +A D + K+L + R+TA + ++HP+
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ + + +++ID+GL+ + + R+
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
+ Y+ PE+L YD D+WS G +L ++ P F+G + YD L R+
Sbjct: 185 GTAYYIAPEVLRG--TYDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
+++D + ++ + Y H I+HRD+KP N++++ + + +++ID+GL+ +
Sbjct: 118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ R+ + Y+ PE+L Y + D A ++ +++
Sbjct: 178 TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVI----------------LYILLSGTP 220
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
F KN R ++ Q +S +A D + K+L + R+TA + ++HP+
Sbjct: 221 PFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ +++ +R+ID+GL+ + ++ ++
Sbjct: 153 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 212
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ PE+L + YD D+WS G +L ++ P F+G + YD L ++ K T
Sbjct: 213 GTAYYIAPEVL--HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTF 269
Query: 120 EL 121
EL
Sbjct: 270 EL 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
++ D + ++L + Y H I+HRD+KP N++++ +++ +R+ID+GL+ +
Sbjct: 146 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV-----HTENQHLV 374
++ ++ + Y+ PE+L H D + D+ W V +
Sbjct: 206 KKMKDKIGTAYYIAPEVL-----HGTYDEK-CDV--------WSTGVILYILLSGCPPFN 251
Query: 375 SPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
D L K G+++ + +W++ VS A D + K+L Y R++AR+A
Sbjct: 252 GANEYDILKKVEKGKYTFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDA 302
Query: 433 MDHPYFYPIVKDQSRHTLPS 452
+DH + K+Q +PS
Sbjct: 303 LDHEWIQTYTKEQISVDVPS 322
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRV 59
RI + Y H I+HRD+KP N++++ +++ +R+ID+GL+ + ++ ++
Sbjct: 154 RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI 213
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+ Y+ PE+L + YD D+WS G +L ++ P F+G + YD L ++ K T
Sbjct: 214 GTAYYIAPEVL--HGTYDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTF 270
Query: 120 EL 121
EL
Sbjct: 271 EL 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPG 319
++ D + ++L + Y H I+HRD+KP N++++ +++ +R+ID+GL+ +
Sbjct: 147 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV-----HTENQHLV 374
++ ++ + Y+ PE+L H D + D+ W V +
Sbjct: 207 KKMKDKIGTAYYIAPEVL-----HGTYDEK-CDV--------WSTGVILYILLSGCPPFN 252
Query: 375 SPEALDFLDKNILGRHSRK--RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
D L K G+++ + +W++ VS A D + K+L Y R++AR+A
Sbjct: 253 GANEYDILKKVEKGKYTFELPQWKK---------VSESAKDLIRKMLTYVPSMRISARDA 303
Query: 433 MDHPYFYPIVKDQSRHTLPS 452
+DH + K+Q +PS
Sbjct: 304 LDHEWIQTYTKEQISVDVPS 323
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 29/148 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG----------------- 52
AL H GI+HRDVKP N + + +K L+D+GLA+ H
Sbjct: 129 ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERC 188
Query: 53 ------------QEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
Q+ R + F+ PE+L ++DMWS G + S++ + PF+
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
Query: 101 HGHDNYDQLVRIAKVLGTEELFEYLDKY 128
D+ L +I + G+ E + +
Sbjct: 249 KASDDLTALAQIMTIRGSRETIQAAKTF 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
F + +L+ ++R Y+ L KAL H GI+HRDVKP N + + +K L+D+GLA
Sbjct: 106 SFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165
Query: 314 EFYH 317
+ H
Sbjct: 166 QGTH 169
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
N+ITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NVITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITSVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
HT S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 HT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 17/124 (13%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYH----PGQEYNVRVASR 62
+ Y H+ ++HRD+KP N+++ E ++++ D G A ++ P + + V +
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIA 113
+++ PELL + Y ++D+W++GC+ A ++ EP FH ++DQL RI
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIF 258
Query: 114 KVLG 117
V+G
Sbjct: 259 NVMG 262
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 67/269 (24%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVN---------------NTDFKQLYQTLTDYDIRYYL 271
N+I+LQ V R L+F++ N QL + + ++ L
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM----VKSLL 134
Query: 272 YELLKALDYCHSMGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYH----PGQEYNV 324
Y++L + Y H+ ++HRD+KP N+++ E ++++ D G A ++ P + +
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194
Query: 325 RVASRYFKGPELLADYQYHIE------LDPRFADILGRHSRKRWERFVHTENQHLVS--P 376
V + +++ PELL +++ + + FA++L E H + + + P
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS------EPIFHCRQEDIKTSNP 248
Query: 377 EALDFLDK--NILGRHSRKRWE-----------------------RFVHTENQHLVSPEA 411
D LD+ N++G + K WE + +H V P++
Sbjct: 249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDS 308
Query: 412 LDF--LDKLLRYDHYERLTAREAMDHPYF 438
F L KLL D +R+T+ +AM PYF
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 201 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANA 191
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 192 FVGTAQYVSPELLTE 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 105
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEG 240
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 249 HVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKL 305
+ N + + + + +D R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHI 171
Query: 306 RLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLAD 339
++ D+G A+ P + N V + + PELL +
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKL--RLIDWGLAEFYHP-GQEYNVRVASRYFKG 66
A+ + H +G++HRD+KP N++ EN L ++ID+G A P Q + ++
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + YD S D+WSLG +L +M+ + P F HD
Sbjct: 178 PELL-NQNGYDESCDLWSLGVILYTMLSGQVP-FQSHD 213
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 110/259 (42%), Gaps = 20/259 (7%)
Query: 177 RKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQAVVK 236
+ LG G +S + ++ +S+ L+ G NI+ L V
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 237 DPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHSMGIMHRDVKP 293
D + L+ E +N + F+++ + ++ + Y + +L+ A+ + H +G++HRD+KP
Sbjct: 77 DQLHTF--LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 294 HNVMIDHENRKL--RLIDWGLAEFYHP-GQEYNVRVASRYFKGPELLADYQYHIELDPRF 350
N++ EN L ++ID+G A P Q + ++ PELL Y D
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWS 194
Query: 351 ADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHS--RKRWERFVHTENQHLVS 408
++ ++ + + ++ L A++ + K G S + W+ VS
Sbjct: 195 LGVI-LYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN---------VS 244
Query: 409 PEALDFLDKLLRYDHYERL 427
EA D + LL D +RL
Sbjct: 245 QEAKDLIQGLLTVDPNKRL 263
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 105
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEG 240
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 249 HVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKL 305
+ N + + + + +D R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +
Sbjct: 113 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHI 171
Query: 306 RLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLAD 339
++ D+G A+ P + N V + + PELL +
Sbjct: 172 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRY- 63
+ ++Y H+ G++HRD+KP N++ E+ +R+ D+G A+ E + + Y
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLLMTPCYT 183
Query: 64 --FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
F PE+L + Q YD + D+WSLG +L +M+ PF +G D+ + I +G+ +
Sbjct: 184 ANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGK- 239
Query: 122 FEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRK--- 178
F Y + D++ + ++ D + ++V W Q YQL R+
Sbjct: 240 FSLSGGYWNSVSDTAKDLVSKM-LHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAP 298
Query: 179 -LGRGKYSEVFEAINVQSS 196
L +G + + A+N S
Sbjct: 299 HLVKGAMAATYSALNRNQS 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDF--KQLYQTL-TDYDIRYYLYELLKALDYCHS 283
NIITL+ V D + ++ E + + K L Q ++ + L+ + K ++Y H+
Sbjct: 77 NIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELL 337
G++HRD+KP N++ E+ +R+ D+G A+ E + + Y F PE+L
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL 192
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
Y D +L + F + + +PE IL R ++
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPE-------EILARIGSGKFSL 242
Query: 398 FVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
N VS A D + K+L D ++RLTA + HP+
Sbjct: 243 SGGYWNS--VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
N+ITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NVITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITSVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
HT S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 HT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 181 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 217
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 113 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 171
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 172 FVGTAQYVSPELLTE 186
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 198
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 199 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 94 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 253
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 254 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
N+ITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NVITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITSVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
HT S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 HT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 201 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 192 FVGTAQYVSPELLTE 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 179 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 215
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 169
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 170 FVGTAQYVSPELLTE 184
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 201 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 192 FVGTAQYVSPELLTE 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 178 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 214
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 110 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 168
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 169 FVGTAQYVSPELLTE 183
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 194 FVGTAQYVSPELLTE 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 201 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 237
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 191
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 192 FVGTAQYVSPELLTE 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 206 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 242
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 247 FEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ N + + + + +D R+Y E++ AL+Y H GI+HRD+KP N++++ E+
Sbjct: 114 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDM 172
Query: 304 KLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLAD 339
+++ D+G A+ P + N V + + PELL +
Sbjct: 173 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 194 FVGTAQYVSPELLTE 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 204 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 240
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 194
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 195 FVGTAQYVSPELLTE 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 180 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 216
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 112 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 170
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 171 FVGTAQYVSPELLTE 185
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 239
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 193
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 194 FVGTAQYVSPELLTE 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-------------PGQEYN 56
AL Y HS GI+HRD+KP N+ ID E+R +++ D+GLA+ H PG N
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 57 VR--VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + + + E+L Y+ +DM+SLG + MI+ PF G + + L ++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRS 243
Query: 115 V 115
V
Sbjct: 244 V 244
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH 317
++L+AL Y HS GI+HRD+KP N+ ID E+R +++ D+GLA+ H
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVH 167
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 132 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 189
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 190 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 249 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 292
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 85 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 141
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 142 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 244
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 245 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-------------PGQEYN 56
AL Y HS GI+HRD+KP N+ ID E+R +++ D+GLA+ H PG N
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 57 VR--VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + + + E+L Y+ +DM+SLG + MI+ PF G + + L ++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRS 243
Query: 115 V 115
V
Sbjct: 244 V 244
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH 317
++L+AL Y HS GI+HRD+KP N+ ID E+R +++ D+GLA+ H
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVH 167
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 185 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 221
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 117 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 175
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 176 FVGTAQYVSPELLTE 190
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + + S D+W+LGC++ ++ PF G++
Sbjct: 203 PELLTE-KSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANS 193
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 194 FVGTAQYVSPELLTE 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 204 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 240
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANS 194
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 195 FVGTAQYVSPELLTE 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 200 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 190
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 191 FVGTAQYVSPELLTE 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 208 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 244
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANX 198
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 199 FVGTAQYVSPELLTE 213
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKG 66
AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N V + +
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
PELL + S D+W+LGC++ ++ PF G++
Sbjct: 200 PELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNV 324
R+Y E++ AL+Y H GI+HRD+KP N++++ E+ +++ D+G A+ P + N
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARANS 190
Query: 325 RVASRYFKGPELLAD 339
V + + PELL +
Sbjct: 191 FVGTAQYVSPELLTE 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 246 IFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHEN-RK 304
+F+ + D+K +++ ++ Y+ + + L + H I+H D+KP N+M + +
Sbjct: 135 LFDRIAAEDYK-----MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS 189
Query: 305 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWER 364
+++ID+GLA +P + V A+ F PE++ D +LG
Sbjct: 190 VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
Query: 365 FVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHY 424
F + D L R WE + VSPEA DF+ LL+ +
Sbjct: 250 FAGED-------------DLETLQNVKRCDWE--FDEDAFSSVSPEAKDFIKNLLQKEPR 294
Query: 425 ERLTAREAMDHPYF 438
+RLT +A++HP+
Sbjct: 295 KRLTVHDALEHPWL 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHEN-RKLRLIDWGLAEFYHPGQEYNVRVASRYFK 65
A L + H I+H D+KP N+M + + +++ID+GLA +P + V A+ F
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ D + + DMW++G + ++ P F G D+ + L + +
Sbjct: 218 APEIV-DREPVGFYTDMWAIGVLGYVLLSGLSP-FAGEDDLETLQNVKRC 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + + +
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDTLCGTLDY 173
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 174 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 69 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + + PE++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 228
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 229 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 189 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 229
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 230 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 279
Query: 437 YF 438
+
Sbjct: 280 WI 281
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 189 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 229
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 230 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 279
Query: 437 YF 438
+
Sbjct: 280 WI 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 187 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 170 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 227
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 228 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 277
Query: 437 YF 438
+
Sbjct: 278 WI 279
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 233 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 273
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 274 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323
Query: 437 YF 438
+
Sbjct: 324 WI 325
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 275
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 188 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 222
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 111 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 171 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 228
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 229 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 278
Query: 437 YF 438
+
Sbjct: 279 WI 280
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 178 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 280
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 73 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 232
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 233 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 178 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 280
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCH 282
NI+ L D +R LI E+ + + Q L+ +D Y+ EL AL YCH
Sbjct: 73 PNILRLYGYFHD-ATRV-YLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
S ++HRD+KP N+++ +L++ D+G + + P + + PE++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 343 HIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
++D +L + +E + E +S F D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---------------- 232
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 233 ------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 194 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 228
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 117 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 177 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 234
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 235 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 284
Query: 437 YF 438
+
Sbjct: 285 WI 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 193 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 227
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 116 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 176 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 233
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 234 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 283
Query: 437 YF 438
+
Sbjct: 284 WI 285
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 239 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 273
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 162 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 222 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 279
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 280 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 329
Query: 437 YFYPIVK 443
+ K
Sbjct: 330 WIMQSTK 336
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 195 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 229
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 118 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 177
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 178 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 235
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 236 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 285
Query: 437 YF 438
+
Sbjct: 286 WI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 203 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 237
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 126 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 186 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 243
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 244 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 293
Query: 437 YFYPIVK 443
+ K
Sbjct: 294 WIMQSTK 300
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S + PE+
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
++ +D+WS G +L M+ R+ PF
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 161 ESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXX----- 215
+S + D +YQ+V+ LG G + +V A + +
Sbjct: 3 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 62
Query: 216 -XXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ--TLTDYDIRYYLY 272
L LR +II L V+K ++ E+ N F + Q +++ + R +
Sbjct: 63 EISYLRLLRH-PHIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 119
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 332
+++ A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S +
Sbjct: 120 QIISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 333 GPELLADYQY 342
PE+++ Y
Sbjct: 179 APEVISGKLY 188
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
S+AL+Y H GI++RD+K NV++D E ++L D+G+ E PG + + +
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF--FHGHDNYDQ 108
PE+L + Y +S+D W+LG ++ M+ + PF DN DQ
Sbjct: 222 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFK---QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + L + R+Y E+ AL+Y H GI++RD+K NV++D E
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++L D+G+ E PG + + + PE+L Y +D
Sbjct: 190 GH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVD 235
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S + PE+
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
++ +D+WS G +L M+ R+ PF
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 172 DYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXX------XXXLENLRGG 225
+YQ+V+ LG G + +V A + + L LR
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH- 63
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ--TLTDYDIRYYLYELLKALDYCHS 283
+II L V+K ++ E+ N F + Q +++ + R + +++ A++YCH
Sbjct: 64 PHIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+KP N+++D E+ +++ D+GL+ G S + PE+++ Y
Sbjct: 122 HKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S + PE+
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
++ +D+WS G +L M+ R+ PF
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 164 VVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXX------XX 217
+ D +YQ+V+ LG G + +V A + +
Sbjct: 1 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS 60
Query: 218 XLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ--TLTDYDIRYYLYELL 275
L LR +II L V+K ++ E+ N F + Q +++ + R + +++
Sbjct: 61 YLRLLRH-PHIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S + PE
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 176
Query: 336 LLADYQY 342
+++ Y
Sbjct: 177 VISGKLY 183
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 114/281 (40%), Gaps = 28/281 (9%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLR---- 223
G D YQ V+KLG G Y EV + + L+ +
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 224 -GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQ---LYQTLTDYDIRYYLYELLKALD 279
NI+ L +D R L+ E + L Q ++ D + ++L
Sbjct: 78 LDHPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
Y H I+HRD+KP N++++ ++R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
+Y + D W V P D+ IL R + ++
Sbjct: 196 RK-KYDEKCDV-------------WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS- 240
Query: 398 FVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ VS EA + +L Y+ +R++A EA++HP+
Sbjct: 241 -FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 70
Y H I+HRD+KP N++++ ++R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 71 ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ YD D+WS G +L ++ P F G + + L R+ K
Sbjct: 196 R--KKYDEKCDVWSCGVILYILLCGYPP-FGGQTDQEILKRVEK 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S + PE+
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
++ +D+WS G +L M+ R+ PF
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 161 ESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXX----- 215
+S + D +YQ+V+ LG G + +V A + +
Sbjct: 4 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 63
Query: 216 -XXXLENLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ--TLTDYDIRYYLY 272
L LR +II L V+K ++ E+ N F + Q +++ + R +
Sbjct: 64 EISYLRLLRH-PHIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ 120
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 332
+++ A++YCH I+HRD+KP N+++D E+ +++ D+GL+ G S +
Sbjct: 121 QIISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 333 GPELLADYQY 342
PE+++ Y
Sbjct: 180 APEVISGKLY 189
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
L + I +L+AL Y H+ G++HRD+K ++++ + R ++L D+G A+
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVP 196
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
+ V + Y+ PE+++ Y E+D W + +V E
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDI-------------WSLGIMV--IEMVDGEPPY 241
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
F D + R R +N H VSP DFL+++L D ER TA+E +DHP+
Sbjct: 242 FSDSPVQA-MKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVAS 61
+ AL Y H+ G++HRD+K ++++ + R ++L D+G A+ + V +
Sbjct: 146 VCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLVGT 204
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
Y+ PE+++ +Y +D+WSLG M+ M+ + P+F
Sbjct: 205 PYWMAPEVIS-RSLYATEVDIWSLGIMVIEMVDGEPPYF 242
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + + +
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDDLCGTLDY 198
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 199 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 94 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + + PE++
Sbjct: 151 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 253
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 254 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKKVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF D Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 267
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 37/279 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A S +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D S LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD--STRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKKVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EALDFLDKNILGRHSRKRWERFV 399
+ ++D W V + P EA + D + KR R V
Sbjct: 183 HDEKVD-------------LWSLGVLCYEFLVGKPPFEANTYQD-------TYKRISR-V 221
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-CHAPSSRRTTLSGTLDY 173
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 174 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNSQNKES 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 122/296 (41%), Gaps = 45/296 (15%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 69 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 228
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSS 454
V+ A D + +LL+++ +R RE ++HP+ I + S+ PS+S
Sbjct: 229 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPW---ITANSSK---PSNS 271
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 244 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 302
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 355
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 356 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V + Y+ PE
Sbjct: 259 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 317
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
L++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 318 LISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 278
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 167 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 225
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 278
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 279 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V + Y+ PE
Sbjct: 182 ALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 240
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
L++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 241 LISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
S+AL+Y H GI++RD+K NV++D E ++L D+G+ E PG + + +
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF--FHGHDNYDQ 108
PE+L + Y +S+D W+LG ++ M+ + PF DN DQ
Sbjct: 190 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFK---QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + L + R+Y E+ AL+Y H GI++RD+K NV++D E
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++L D+G+ E PG + + + PE+L Y +D
Sbjct: 158 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 203
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
S+AL+Y H GI++RD+K NV++D E ++L D+G+ E PG + + +
Sbjct: 116 SLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF--FHGHDNYDQ 108
PE+L + Y +S+D W+LG ++ M+ + PF DN DQ
Sbjct: 175 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFK---QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + L + R+Y E+ AL+Y H GI++RD+K NV++D E
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++L D+G+ E PG + + + PE+L Y +D
Sbjct: 143 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 188
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTELCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDY 174
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 175 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 70 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 229
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 230 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
S+AL+Y H GI++RD+K NV++D E ++L D+G+ E PG + + +
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF--FHGHDNYDQ 108
PE+L + Y +S+D W+LG ++ M+ + PF DN DQ
Sbjct: 179 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFK---QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + L + R+Y E+ AL+Y H GI++RD+K NV++D E
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++L D+G+ E PG + + + PE+L Y +D
Sbjct: 147 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVD 192
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+ + Y+ P
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
E+L + YD S DMWSLG ++ ++ PF+ H
Sbjct: 187 EVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 110 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F ++ + +SP
Sbjct: 170 SHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF-YSNHGLAISP- 227
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G +R R ++ + VS E + LL+ + +R+T E M+HP
Sbjct: 228 ----------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 277
Query: 437 YF 438
+
Sbjct: 278 WI 279
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 124 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 182
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 235
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 236 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVAS 61
+ AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V +
Sbjct: 132 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGT 190
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PEL++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 191 PYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
N+ITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NVITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITAVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
T S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 QT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 122 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 180
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 233
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 234 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVAS 61
+ AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V +
Sbjct: 130 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGT 188
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PEL++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 189 PYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
+ Y H I+HRD+KP N++++++N ++++D+GL+ F+ + R+ + Y+ P
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAP 217
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
E+L + Y+ D+WS G ++ ++ P F G ++ D + ++ K
Sbjct: 218 EVLK--KKYNEKCDVWSCGVIMYILLCGYPP-FGGQNDQDIIKKVEK 261
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 271 LYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVAS 328
+ ++L + Y H I+HRD+KP N++++++N ++++D+GL+ F+ + R+ +
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGT 211
Query: 329 RYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA-----LDFLD 383
Y+ PE+L +Y+ + D ++ + F +Q ++ DF D
Sbjct: 212 AYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFND 270
Query: 384 KNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMD 434
W+ +S EA + + +L YD+ +R TA EA++
Sbjct: 271 -----------WKN---------ISDEAKELIKLMLTYDYNKRCTAEEALN 301
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
N+ITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NVITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITAVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
T S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 QT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 70
Y H I+HRD+KP N++++ ++R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 71 ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ YD D+WS G +L ++ P F G + + L R+ K
Sbjct: 179 R--KKYDEKCDVWSCGVILYILLCGYPP-FGGQTDQEILKRVEK 219
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 119/300 (39%), Gaps = 32/300 (10%)
Query: 168 GQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLR---- 223
G D YQ V+KLG G Y EV + + L+ +
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 224 -GGTNIITLQAVVKDPVSRTPALIFEHVNNTDFKQ---LYQTLTDYDIRYYLYELLKALD 279
NI+ L +D R L+ E + L Q ++ D + ++L
Sbjct: 61 LDHPNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
Y H I+HRD+KP N++++ ++R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
+Y + D W V P D+ IL R + ++
Sbjct: 179 RK-KYDEKCDV-------------WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS- 223
Query: 398 FVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK----DQSRHTLPSS 453
+ VS EA + +L Y+ +R++A EA++HP+ D +H L +
Sbjct: 224 -FDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGA 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 117 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 175
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 228
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 229 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVAS 61
+ AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V +
Sbjct: 125 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGT 183
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PEL++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 184 PYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 227 NIITLQAVVKDPVSRTPA-LIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCH 282
NIITL V ++ RT LI E V+ DF ++L++ + ++ ++L ++Y H
Sbjct: 76 NIITLHDVYEN---RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 283 SMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
+ I H D+KP N+M+ +N ++LID+GLA G E+ + F PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+E D ++ F+ Q ++ NI E F
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA---------NITAVSYDFDEEFFS 243
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
T S A DF+ KLL + +RLT +EA+ HP+ P+ Q+
Sbjct: 244 QT------SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQA 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
++Y H+ I H D+KP N+M+ +N ++LID+GLA G E+ + F
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ +Y+ DMWS+G + ++ PF G + L I V
Sbjct: 187 PEIV-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ ++G + + P + +
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIANFGWS-VHAPSSRRTTLCGTLDY 174
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 175 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 70 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ ++G + + P + + PE++
Sbjct: 127 HSKRVIHRDIKPENLLLGSAG-ELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 229
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 230 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL H+ G++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 113 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVP 171
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP--EA 378
V + Y+ PEL++ Y E+D I+ V E + P +A
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPPYFNEPPLKA 224
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + N+ R +N H VSP FLD+LL D +R TA E + HP+
Sbjct: 225 MKMIRDNLPPR-----------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVAS 61
+ AL H+ G++HRD+K ++++ H+ R ++L D+G A+ V +
Sbjct: 121 VCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGT 179
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PEL++ Y +D+WSLG M+ M+ + P+F+
Sbjct: 180 PYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM-IDHENRKLRLIDWGLAEFYHPG 319
LT+ D ++ ++ + + + H M I+H D+KP N++ ++ + +++++ID+GLA Y P
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
++ V + F PE++ D ++ F+ + ++
Sbjct: 243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN---- 298
Query: 380 DFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
NIL RW+ + E +S EA +F+ KLL + R++A EA+ HP+
Sbjct: 299 -----NILAC----RWD--LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM-IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ + H M I+H D+KP N++ ++ + +++++ID+GLA Y P ++ V + F PE
Sbjct: 199 GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPE 258
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
++ +Y + DMWS+G + ++ PF +D
Sbjct: 259 VV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLA-EFYHPGQEYNVRVASRY 63
+ ++Y H+ G++HRD+KP N++ E+ +R+ D+G A + +
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN 185
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
F PE+L + Q YD + D+WSLG +L + + PF +G D+ + I +G+ + F
Sbjct: 186 FVAPEVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGK-FS 241
Query: 124 YLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDWGQQDDYQLVRK----L 179
Y + D++ + ++ D + ++V W Q YQL R+ L
Sbjct: 242 LSGGYWNSVSDTAKDLVSKX-LHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHL 300
Query: 180 GRGKYSEVFEAINVQSS 196
+G + + A+N S
Sbjct: 301 VKGAXAATYSALNRNQS 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 271 LYELLKALDYCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLA-EFYHPGQEYNVRV 326
L+ + K ++Y H+ G++HRD+KP N++ E+ +R+ D+G A +
Sbjct: 122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 327 ASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
+ F PE+L Y D +L + F + + +PE I
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDD---TPE-------EI 231
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
L R ++ N VS A D + K L D ++RLTA + HP+
Sbjct: 232 LARIGSGKFSLSGGYWNS--VSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDY 173
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 174 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 69 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 228
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 229 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLXGTLDY 177
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 178 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 280
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 37/279 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCH 282
NI+ L D +R LI E+ + + Q L+ +D Y+ EL AL YCH
Sbjct: 73 PNILRLYGYFHD-ATRV-YLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
S ++HRD+KP N+++ +L++ D+G + + P + + PE++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 343 HIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
++D +L + +E + E +S F D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---------------- 232
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 233 ------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 171
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 172 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 231 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 266
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 67 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 123
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 124 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 226
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 227 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDY 177
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 178 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKPSNCQNKES 280
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 73 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 232
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 233 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI-DHENR 303
L FE V D +Y ++ +Y+ ++L+AL YCH I+HRDVKP NV++ EN
Sbjct: 113 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENS 169
Query: 304 K-LRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKR 361
++L D+G+A + G RV + +F PE++ Y +D ++
Sbjct: 170 APVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Query: 362 WERFVHTENQHLVSPEALDFLDKNILGRH--SRKRWERFVHTENQHLVSPEALDFLDKLL 419
F T+ + + I G++ + ++W +S A D + ++L
Sbjct: 230 CLPFYGTKER---------LFEGIIKGKYKMNPRQWSH---------ISESAKDLVRRML 271
Query: 420 RYDHYERLTAREAMDHPYF 438
D ER+T EA++HP+
Sbjct: 272 MLDPAERITVYEALNHPWL 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMI-DHENRK-LRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
AL YCH I+HRDVKP NV++ EN ++L D+G+A + G RV + +F
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE-LFEYL 125
PE++ + Y +D+W G +L ++ PF+ GT+E LFE +
Sbjct: 202 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFEGI 244
Query: 126 DKYHIELDPR 135
K +++PR
Sbjct: 245 IKGKYKMNPR 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 177 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 236 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 72 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 128
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 129 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 231
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 232 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 234 VVKDPVSRTPALIFEHVNNT--------DFKQLYQTLTDYDIRYYLYELLKALDYCHSMG 285
VVK + P E +N + DF Q + +++ + ++ AL Y H+ G
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI-----MRQIFSALHYLHNQG 188
Query: 286 IMHRDVKPHNVMID-HENRKLRLIDWGLA-EFY--HPGQEYNV--RVASRYFKGPELL-- 337
I HRD+KP N + +++ +++L+D+GL+ EFY + G+ Y + + + YF PE+L
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
+ Y + D A +L HL+ A+ F N S+ ++
Sbjct: 249 TNESYGPKCDAWSAGVL----------------LHLLLMGAVPFPGVNDADTISQVLNKK 292
Query: 398 FV-HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
N +++SP A D L LL + ER A A+ HP+
Sbjct: 293 LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 13/138 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID-HENRKLRLIDWGLA-EFY--HPGQEYNV--RVASRY 63
AL Y H+ GI HRD+KP N + +++ +++L+D+GL+ EFY + G+ Y + + + Y
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 64 FKGPELL-ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELF 122
F PE+L + Y D WS G +L ++ P F G ++ D I++VL + F
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP-FPGVNDADT---ISQVLNKKLCF 295
Query: 123 EYLDKYHIELDPRFADIL 140
E + Y++ L P D+L
Sbjct: 296 ENPN-YNV-LSPLARDLL 311
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ N +L++ D+G + + P + + +
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRDTLCGTLDY 176
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--------- 115
PE++ + +M+D +D+WSLG + + P F H + RI++V
Sbjct: 177 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGMPP-FEAHTYQETYRRISRVEFTFPDFVT 234
Query: 116 LGTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ A++L + A NS KP
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKA--NSSKP 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+ + R LG+GK+ V+ A QS +++
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D + LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYC 128
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ N +L++ D+G + + P + + + PE++
Sbjct: 129 HSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L +E + E +S F D
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD--------------- 231
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +RLT E ++HP+
Sbjct: 232 -------FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTXLCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 267
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 267
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CHS G++HRD+K N++ID +LID+G H + Y +R + PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPEW 209
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
++ +Q + +WSLG +L M+ PF
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPF 239
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R + +++ A+ +CHS G++HRD+K N++ID +LID+G H + Y
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDG 200
Query: 328 SRYFKGPELLADYQYH 343
+R + PE ++ +QYH
Sbjct: 201 TRVYSPPEWISRHQYH 216
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVA 60
I A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 166 IXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 225
Query: 61 SRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
+ Y+ PE+L + YD S D WSLG + ++ PF+ H
Sbjct: 226 TPYYVAPEVLGP-EKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYH 317
Q T+ + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 156 QAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELD 347
+ Y+ PE+L +Y D
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCD 245
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ N +L++ D+G + + P + +
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--------- 115
PE++ + +M+D +D+WSLG + + P F H + RI++V
Sbjct: 177 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGMPP-FEAHTYQETYRRISRVEFTFPDFVT 234
Query: 116 LGTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ A++L + A NS KP
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKA--NSSKP 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+ + R LG+GK+ V+ A QS +++
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D + LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 72 PNILRLYGYFHD--ATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYC 128
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ N +L++ D+G + + P + + PE++
Sbjct: 129 HSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L +E + E +S F D
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD--------------- 231
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +RLT E ++HP+
Sbjct: 232 -------FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 246 IFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID-HENRK 304
IFE +N + F+ L + +I Y++++ +AL + HS I H D++P N++ +
Sbjct: 88 IFERINTSAFE-----LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142
Query: 305 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWER 364
+++I++G A PG + + + + PE+ D L
Sbjct: 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
Query: 365 FVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHY 424
F+ NQ ++ +NI+ E F +S EA+DF+D+LL +
Sbjct: 203 FLAETNQQII---------ENIMNAEYTFDEEAFKE------ISIEAMDFVDRLLVKERK 247
Query: 425 ERLTAREAMDHPYF 438
R+TA EA+ HP+
Sbjct: 248 SRMTASEALQHPWL 261
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
AL + HS I H D++P N++ + +++I++G A PG + + + + PE
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE 173
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
+ + + + DMWSLG ++ ++ PF
Sbjct: 174 -VHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG + + +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE+LA + Y ++D WS+G + ++ PF+ +D +LFE +
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDEND--------------AKLFEQIL 231
Query: 127 KYHIELD-PRFADILGRAR 144
K E D P + DI A+
Sbjct: 232 KAEYEFDSPYWDDISDSAK 250
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPG 319
T+ D ++++L A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPG 172
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ + + PE+LA Y +D ++ +++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA----------------YILLCGYP 216
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ------HLVSPEALDFLDKLLRYDHYERLTAREAM 433
F D+N K +E+ + E + +S A DF+ L+ D +R T +A+
Sbjct: 217 PFYDEN-----DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 434 DHPYF 438
HP+
Sbjct: 272 QHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG + + +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE+LA + Y ++D WS+G + ++ PF+ +D +LFE +
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------------KLFEQIL 231
Query: 127 KYHIELD-PRFADILGRAR 144
K E D P + DI A+
Sbjct: 232 KAEYEFDSPYWDDISDSAK 250
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPG 319
T+ D ++++L A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPG 172
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ + + PE+LA Y +D ++ +++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA----------------YILLCGYP 216
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ------HLVSPEALDFLDKLLRYDHYERLTAREAM 433
F D+N K +E+ + E + +S A DF+ L+ D +R T +A+
Sbjct: 217 PFYDEN-----DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 434 DHPYF 438
HP+
Sbjct: 272 QHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG + + +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE+LA + Y ++D WS+G + ++ PF+ +D +LFE +
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------------KLFEQIL 231
Query: 127 KYHIELD-PRFADILGRAR 144
K E D P + DI A+
Sbjct: 232 KAEYEFDSPYWDDISDSAK 250
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPG 319
T+ D ++++L A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPG 172
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ + + PE+LA Y +D ++ +++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA----------------YILLCGYP 216
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ------HLVSPEALDFLDKLLRYDHYERLTAREAM 433
F D+N K +E+ + E + +S A DF+ L+ D +R T +A+
Sbjct: 217 PFYDEN-----DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 434 DHPYF 438
HP+
Sbjct: 272 QHPWI 276
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 74/282 (26%)
Query: 246 IFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHEN 302
I + ++D K+L++T LT+ I+ LY LL ++ H GI+HRD+KP N +++ ++
Sbjct: 107 IVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN-QD 165
Query: 303 RKLRLIDWGLAEFYHPGQEYNV-----------------------RVASRYFKGPELL-- 337
+++ D+GLA + ++ N+ V +R+++ PEL+
Sbjct: 166 CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225
Query: 338 -ADYQYHIEL-------------------DP--RFADILGRH----SRKRWERFVHTENQ 371
+Y I++ DP RF G S R + VH ++
Sbjct: 226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSN 285
Query: 372 --------HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL------VSPEALDFLDK 417
+++ D L KNI K + F H + +L +S + ++ L+
Sbjct: 286 RDQLNIIFNIIGTPTEDDL-KNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLES 344
Query: 418 LLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSSPTPIV 459
+L+++ +R+T +A+DHPY +KD + L + S I+
Sbjct: 345 MLKFNPNKRITIDQALDHPY----LKDVRKKKLENFSTKKII 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 24/105 (22%)
Query: 12 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV-------------- 57
++ H GI+HRD+KP N +++ ++ +++ D+GLA + ++ N+
Sbjct: 143 NFIHESGIIHRDLKPANCLLN-QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 58 ---------RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
V +R+++ PEL+ + Y S+D+WS GC+ A ++
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ + H+ I+HRD+KP N+++D +N ++RL D+G + PG++ + + PE+
Sbjct: 212 AVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
Query: 70 LA-----DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
L + Y +D+W+ G +L +++ PF+H
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 44/195 (22%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
L++ + R + LL+A+ + H+ I+HRD+KP N+++D +N ++RL D+G + PG+
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFSCHLEPGE 254
Query: 321 EYNVRVASRYFKGPELLADYQ------YHIELDPRFADI----LGRHSRKRWERFVHTEN 370
+ + + PE+L Y E+D + L S W R
Sbjct: 255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR------ 308
Query: 371 QHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPE-------ALDFLDKLLRYDH 423
+ IL R + SPE D + +LL+ D
Sbjct: 309 -------------RQIL-------MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDP 348
Query: 424 YERLTAREAMDHPYF 438
RLTA +A+ HP+F
Sbjct: 349 EARLTAEQALQHPFF 363
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 74 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 192 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 234
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 235 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 188 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 74 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 192 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 234
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 235 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 187
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 188 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 231
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG + + +
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVA 186
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE+LA + Y ++D WS+G + ++ PF+ +D +LFE +
Sbjct: 187 PEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------------KLFEQIL 231
Query: 127 KYHIELD-PRFADILGRAR 144
K E D P + DI A+
Sbjct: 232 KAEYEFDSPYWDDISDSAK 250
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM---IDHENRKLRLIDWGLAEFYHPG 319
T+ D ++++L A+ Y H +GI+HRD+KP N++ +D E+ K+ + D+GL++ PG
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPG 172
Query: 320 QEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ + + PE+LA Y +D ++ +++
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA----------------YILLCGYP 216
Query: 380 DFLDKNILGRHSRKRWERFVHTENQ------HLVSPEALDFLDKLLRYDHYERLTAREAM 433
F D+N K +E+ + E + +S A DF+ L+ D +R T +A+
Sbjct: 217 PFYDEN-----DAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 434 DHPYF 438
HP+
Sbjct: 272 QHPWI 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENR---KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A L+ H I++RD+KP N+++D ++ +R+ D GLA GQ RV +
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ PE++ + + Y +S D W+LGC+L MI + PF
Sbjct: 351 YMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 269 YYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 328
+Y E+ L+ H I++RD+KP N+++D ++ +R+ D GLA GQ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 329 RYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILG 388
+ PE++ + +Y D W + + K I
Sbjct: 349 VGYMAPEVVKNERYTFSPD--------------WWALGCLLYEMIAGQSPFQQRKKKI-K 393
Query: 389 RHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERL-----TAREAMDHPYF 438
R +R + V E SP+A +LL D ERL +ARE +HP F
Sbjct: 394 REEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDY 172
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 173 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 267
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 68 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 227
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 228 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A++YCH I+HRD+KP N+++D +N +++ D+GL+ G S + PE+
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WS G +L M+ + PF
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT--LTDYDIRYYLYELLKALDYCHSMG 285
II L V+ P ++ E+ F + + +T+ + R + +++ A++YCH
Sbjct: 71 IIKLYDVITTPTD--IVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 286 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+KP N+++D +N +++ D+GL+ G S + PE++ Y
Sbjct: 129 IVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A L+ H I++RD+KP N+++D ++ +R+ D GLA GQ RV +
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ PE++ + + Y +S D W+LGC+L MI + PF
Sbjct: 351 YMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF 385
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 269 YYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 328
+Y E+ L+ H I++RD+KP N+++D ++ +R+ D GLA GQ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 329 RYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILG 388
+ PE++ + +Y D W + + K I
Sbjct: 349 VGYMAPEVVKNERYTFSPD--------------WWALGCLLYEMIAGQSPFQQRKKKI-K 393
Query: 389 RHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERL-----TAREAMDHPYF 438
R +R + V E SP+A +LL D ERL +ARE +HP F
Sbjct: 394 REEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ ++G + + P + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIANFGWS-VHAPSSRRTTLCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 270
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ ++G + + P + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE + + + +D +D+WSLG + + K PF + Y ++ R+
Sbjct: 178 LPPEXI-EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKPREYWDYES 162
G +L L K++ P ++L + A NS KP + ES
Sbjct: 237 GARDLISRLLKHNPSQRPXLREVLEHPWITA--NSSKPSNCQNKES 280
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 73 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 232
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 233 -------FVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 50/301 (16%)
Query: 173 YQLVRKLGRGKYSEVF----EAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNI 228
YQ V+KLG G Y EV + +V+ + + L NI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 229 ITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQTL--TDYDIRYYLYELLKALDYCHSMG 285
+ L +D R L+ E + F ++ + + D + ++L + Y H
Sbjct: 99 MKLYDFFEDK--RNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 286 IMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYH 343
I+HRD+KP N++++ + + ++++D+GL+ + ++ R+ + Y+ PE+L +Y
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYD 215
Query: 344 IELDPRFADIL-----------GRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSR 392
+ D ++ G + + R V SPE
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE--------------- 260
Query: 393 KRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIV-KDQSRHTLP 451
W+ VS A D + ++L++D R++A++A++HP+ + K +S LP
Sbjct: 261 --WKN---------VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELP 309
Query: 452 S 452
S
Sbjct: 310 S 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
+ Y H I+HRD+KP N++++ + + ++++D+GL+ + ++ R+ + Y+ P
Sbjct: 148 GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAP 207
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
E+L + YD D+WS+G +L ++ P F G + + L ++ K
Sbjct: 208 EVL--RKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEK 251
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
SMAL + H GI++RD+KP N+M++H+ ++L D+GL E H G + + +
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHTFCGTIEYMA 189
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE+L ++ ++D WSLG ++ M+ P F G + + +I K
Sbjct: 190 PEILM-RSGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILKC 236
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQ 232
++L+R LG+G Y +VF+ V ++ + + NI+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL--- 75
Query: 233 AVVKDP----------VSRTPALIFEHVNNTD-FKQLYQ--TLTDYDIRYYLYELLKALD 279
VK P LI E+++ + F QL + + +YL E+ AL
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
+ H GI++RD+KP N+M++H+ ++L D+GL E H G + + + PE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 339 DYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
++ +D W + +P G + +K ++
Sbjct: 195 RSGHNRAVD-------------WWSLGALMYDMLTGAPP--------FTGENRKKTIDKI 233
Query: 399 VHTENQ--HLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYF 438
+ + ++ EA D L KLL+ + RL A E HP+F
Sbjct: 234 LKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDDLCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYADVNSHKP 154
G +L L K++ P ++L + A NS KP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITA--NSSKP 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
A+DYCH ++HRD+KP NV++D H N K+ D+GL+ G+ S + PE
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPE 180
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+++ +D+WS G +L +++ PF
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
+II L V+ P ++ E+V+ D+ + + + + R ++L A+DYCH
Sbjct: 72 HIIKLYQVISTPTDFF--MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 284 MGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
++HRD+KP NV++D H N K+ D+GL+ G+ S + PE+++ Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQEYNVRVASRYFK 65
++ LD+ HS+GI++RD+KP N+++D E ++L D+GL++ H + Y+ Y
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYM- 197
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ + Q + +S D WS G ++ M+ P F G D + + I K
Sbjct: 198 APEVV-NRQGHSHSADWWSYGVLMFEMLTGSLP-FQGKDRKETMTLILKA 245
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
T+ D+++YL EL LD+ HS+GI++RD+KP N+++D E ++L D+GL++
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK 178
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI-DHENR 303
L FE V D +Y ++ +Y+ ++L+AL YCH I+HRDVKPH V++ EN
Sbjct: 115 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 171
Query: 304 K-LRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKR 361
++L +G+A + G RV + +F PE++ Y +D ++
Sbjct: 172 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Query: 362 WERFVHTENQHLVSPEALDFLDKNILGRH--SRKRWERFVHTENQHLVSPEALDFLDKLL 419
F T+ + + I G++ + ++W +S A D + ++L
Sbjct: 232 CLPFYGTKER---------LFEGIIKGKYKMNPRQWSH---------ISESAKDLVRRML 273
Query: 420 RYDHYERLTAREAMDHPYF 438
D ER+T EA++HP+
Sbjct: 274 MLDPAERITVYEALNHPWL 292
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMI-DHENRK-LRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
AL YCH I+HRDVKPH V++ EN ++L +G+A + G RV + +F
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE-LFEYL 125
PE++ + Y +D+W G +L ++ PF+ GT+E LFE +
Sbjct: 204 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFEGI 246
Query: 126 DKYHIELDPR 135
K +++PR
Sbjct: 247 IKGKYKMNPR 256
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 10/157 (6%)
Query: 166 DWGQQDDYQLVRKLGRGKYSEVFEAIN-----VQSSDXXXXXXXXXXXXXXXXXXXXXLE 220
DW D Y++ +G G Y V EA + V + L
Sbjct: 48 DWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILN 107
Query: 221 NLRGGTNIITLQAVVKDPVSRTPAL-IFEHVNNTDFKQLYQT---LTDYDIRYYLYELLK 276
L + L V+ V + L + + ++DFK+L++T LT+ I+ LY LL
Sbjct: 108 RLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 277 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ Y HS GI+HRD+KP N +++ ++ +++ D+GLA
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVN-QDCSVKVCDFGLA 203
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 61/179 (34%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--------------------- 47
+ + Y HS GI+HRD+KP N +++ ++ +++ D+GLA
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVN-QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 48 ----FYHPG---QEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI------- 93
F H ++ V +R+++ PEL+ + Y ++D+WS+GC+ A ++
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 94 ---------------FRKEP--------FFHGHDNYDQLVRIAKVLGT--EELFEYLDK 127
F P FH N DQL I +LGT EE E L+K
Sbjct: 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEK 344
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQL--YQTLTDYDIRYYLYELLKALDYCHSM 284
N++ L V+ DP ++FE VN ++ + L++ R+Y +L+K ++Y H
Sbjct: 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ 156
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
I+HRD+KP N+++ E+ +++ D+G++ EF + V + F PE L++ +
Sbjct: 157 KIIHRDIKPSNLLVG-EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR-- 213
Query: 344 IELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTEN 403
I + W V + F+D+ I+ HS+ + + + +
Sbjct: 214 --------KIFSGKALDVWAMGV---TLYCFVFGQCPFMDERIMCLHSKIK-SQALEFPD 261
Query: 404 QHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
Q ++ + D + ++L + R+ E HP+
Sbjct: 262 QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
++Y H I+HRD+KP N+++ E+ +++ D+G++ EF + V + F PE
Sbjct: 149 GIEYLHYQKIIHRDIKPSNLLVG-EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE 207
Query: 69 LLADYQ--MYDYSLDMWSLGCMLASMIFRKEPFF 100
L++ + +LD+W++G L +F + PF
Sbjct: 208 SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQEYNVRVASRYFK 65
++ALD+ HS+GI++RD+KP N+++D E ++L D+GL++ H + Y+ Y
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYM- 193
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ + + + S D WS G ++ M+ P F G D + + I K
Sbjct: 194 APEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKA 241
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
T+ D+++YL EL ALD+ HS+GI++RD+KP N+++D E ++L D+GL++
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK 174
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP-GQEYNVRVASRYFKGPE 68
AL++ HS +MHRD+KP NV I ++L D GL F+ + V + Y+ PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 111
+ + Y++ D+WSLGC+L M + PF+ N L +
Sbjct: 207 RIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 172 DYQLVRKLGRGKYSEVFEA------INVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
++++ +K+GRG++SEV+ A + V L+ L
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTD-------FKQLYQTLTDYDIRYYLYELLKAL 278
I + ++D ++ E + D FK+ + + + + Y +L AL
Sbjct: 93 NVIKYYASFIED---NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 279 DYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP-GQEYNVRVASRYFKGPELL 337
++ HS +MHRD+KP NV I ++L D GL F+ + V + Y+ PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 338 ADYQYHIELD 347
+ Y+ + D
Sbjct: 209 HENGYNFKSD 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
N+ITL V ++ LI E V DF ++LT+ + +L ++L + Y HS
Sbjct: 75 NVITLHEVYENKTDVI--LIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 284 MGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 341 QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFL---DKNILGRHSRKRWER 397
+E D W V T +++ A FL + L S +E
Sbjct: 193 PLGLEAD-------------MWSIGVIT---YILLSGASPFLGDTKQETLANVSAVNYE- 235
Query: 398 FVHTENQHLVSPEAL--DFLDKLLRYDHYERLTAREAMDHPYFYP 440
E+++ + AL DF+ +LL D +R+T ++++ HP+ P
Sbjct: 236 ---FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHEN---RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS+ I H D+KP N+M+ N ++++ID+GLA G E+ + F PE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L ++ V
Sbjct: 189 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
SMAL + H GI++RD+KP N+M++H+ ++L D+GL E H G + + +
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHXFCGTIEYMA 189
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE+L ++ ++D WSLG ++ M+ P F G + + +I K
Sbjct: 190 PEILM-RSGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILKC 236
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 46/287 (16%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQ 232
++L+R LG+G Y +VF+ V ++ + + NI+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL--- 75
Query: 233 AVVKDP----------VSRTPALIFEHVNNTD-FKQLYQ--TLTDYDIRYYLYELLKALD 279
VK P LI E+++ + F QL + + +YL E+ AL
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
+ H GI++RD+KP N+M++H+ ++L D+GL E H G + + + PE+L
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 339 DYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
++ +D W + +P G + +K ++
Sbjct: 195 RSGHNRAVD-------------WWSLGALMYDMLTGAPP--------FTGENRKKTIDKI 233
Query: 399 VHTENQ--HLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYF 438
+ + ++ EA D L KLL+ + RL A E HP+F
Sbjct: 234 LKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI-DHENR 303
L FE V D +Y ++ +Y+ ++L+AL YCH I+HRDVKPH V++ EN
Sbjct: 113 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 304 K-LRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKR 361
++L +G+A + G RV + +F PE++ Y +D ++
Sbjct: 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Query: 362 WERFVHTENQHLVSPEALDFLDKNILGRH--SRKRWERFVHTENQHLVSPEALDFLDKLL 419
F T+ + + I G++ + ++W +S A D + ++L
Sbjct: 230 CLPFYGTKER---------LFEGIIKGKYKMNPRQWSH---------ISESAKDLVRRML 271
Query: 420 RYDHYERLTAREAMDHPYF 438
D ER+T EA++HP+
Sbjct: 272 MLDPAERITVYEALNHPWL 290
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMI-DHENRK-LRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
AL YCH I+HRDVKPH V++ EN ++L +G+A + G RV + +F
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEE-LFEYL 125
PE++ + Y +D+W G +L ++ PF+ GT+E LFE +
Sbjct: 202 PEVV-KREPYGKPVDVWGCGVILFILLSGCLPFY----------------GTKERLFEGI 244
Query: 126 DKYHIELDPR 135
K +++PR
Sbjct: 245 IKGKYKMNPR 254
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 39/285 (13%)
Query: 170 QDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGG 225
Q YQL +LG+G +S V + V + E L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 226 TNIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDY 280
NI+ L D +S LIF+ V + F+ + + ++ D + + ++L+A+ +
Sbjct: 81 PNIVRLH----DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 281 CHSMGIMHRDVKPHNVMIDH--ENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELL 337
CH MG++HRD+KP N+++ + ++L D+GLA E Q + + + PE+L
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQH----LVSPEALDFLDKNILGRHSRK 393
Y +D ++ + F E+QH + A DF
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQIKAGAYDF---------PSP 246
Query: 394 RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
W+ V+PEA D ++K+L + +R+TA EA+ HP+
Sbjct: 247 EWDT---------VTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDH--ENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
A+ +CH MG++HRD+KP N+++ + ++L D+GLA E Q + + +
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 192
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y +D+W+ G +L ++ PF+
Sbjct: 193 PEVLRK-DPYGKPVDLWACGVILYILLVGYPPFW 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQEYNVRVASRYFK 65
++ALD+ HS+GI++RD+KP N+++D E ++L D+GL++ H + Y+ Y
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYM- 194
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ + + + S D WS G ++ M+ P F G D + + I K
Sbjct: 195 APEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKA 242
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
T+ D+++YL EL ALD+ HS+GI++RD+KP N+++D E ++L D+GL++
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK 175
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE--FYHPGQEYNVRVASRYFK 65
++ALD+ HS+GI++RD+KP N+++D E ++L D+GL++ H + Y+ Y
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYM- 193
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
PE++ + + + S D WS G ++ M+ P F G D + + I K
Sbjct: 194 APEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKA 241
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
T+ D+++YL EL ALD+ HS+GI++RD+KP N+++D E ++L D+GL++
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSK 174
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGT 226
D+YQL +LG+G +S V + + + E L
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 227 NIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDYC 281
NI+ L D +S L+F+ V + F+ + + ++ D + + ++L+++++C
Sbjct: 64 NIVRLH----DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
H GI+HRD+KP N+++ +++ ++L D+GLA E Q + + + PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 339 DYQYHIELDPRFADILGRHSRKRWERFVHTENQH----LVSPEALDFLDKNILGRHSRKR 394
Y +D ++ + F E+QH + A DF
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQIKAGAYDF---------PSPE 229
Query: 395 WERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
W+ V+PEA D ++K+L + +R+TA EA+ HP+
Sbjct: 230 WDT---------VTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
++++CH GI+HRD+KP N+++ +++ ++L D+GLA E Q + + +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y +DMW+ G +L ++ PF+
Sbjct: 175 PEVLRK-DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+ GA L Y HS ++HRDVK N+++ E ++L D+G A P N V +
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA---NXFVGTP 175
Query: 63 YFKGPE--LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PE L D YD +D+WSLG + RK P F+
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L + +I + L+ L Y HS ++HRDVK N+++ E ++L D+G A P
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA 168
Query: 320 QEYNVRVASRYFKGPELL 337
N V + Y+ PE++
Sbjct: 169 ---NXFVGTPYWMAPEVI 183
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+ GA L Y HS ++HRDVK N+++ E ++L D+G A P N V +
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA---NXFVGTP 214
Query: 63 YFKGPE--LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
Y+ PE L D YD +D+WSLG + RK P F+
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L + +I + L+ L Y HS ++HRDVK N+++ E ++L D+G A P
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA 207
Query: 320 QEYNVRVASRYFKGPELL 337
N V + Y+ PE++
Sbjct: 208 ---NXFVGTPYWMAPEVI 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGT 226
D+YQL +LG+G +S V + + + E L
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 227 NIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDYC 281
NI+ L D +S L+F+ V + F+ + + ++ D + + ++L+++++C
Sbjct: 64 NIVRLH----DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
H GI+HRD+KP N+++ +++ ++L D+GLA E Q + + + PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 339 DYQYHIELDPRFADILGRHSRKRWERFVHTENQH----LVSPEALDFLDKNILGRHSRKR 394
Y +D ++ + F E+QH + A DF
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQIKAGAYDF---------PSPE 229
Query: 395 WERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
W+ V+PEA D ++K+L + +R+TA EA+ HP+
Sbjct: 230 WDT---------VTPEAKDLINKMLTINPAKRITASEALKHPWI 264
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
++++CH GI+HRD+KP N+++ +++ ++L D+GLA E Q + + +
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y +DMW+ G +L ++ PF+
Sbjct: 175 PEVLRK-DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYAD 148
G +L L K++ P ++L + A+
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A +AL+Y HS I++RD+KP N+++D +N +++ D+G A+ Y P Y + Y
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAK-YVPDVTYXLCGTPDY 169
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+++ + Y+ S+D WS G ++ M+ PF+
Sbjct: 170 I-APEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFY 204
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 31/182 (17%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
++Y E+ AL+Y HS I++RD+KP N+++D +N +++ D+G A+ Y P Y +
Sbjct: 109 KFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAK-YVPDVTYXLCGT 166
Query: 328 SRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNIL 387
Y PE+++ Y+ +D W F + L F D N +
Sbjct: 167 PDYI-APEVVSTKPYNKSID--------------WWSFGILIYEMLAG--YTPFYDSNTM 209
Query: 388 GRHSRKRWERFVHTENQH--LVSPEALDFLDKLLRYDHYERL-----TAREAMDHPYFYP 440
K +E+ ++ E + + + D L +L+ D +RL + +HP+F
Sbjct: 210 -----KTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
Query: 441 IV 442
+V
Sbjct: 265 VV 266
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDY 169
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 170 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYAD 148
G +L L K++ P ++L + A+
Sbjct: 229 GARDLISRLLKHNPSQRPMLREVLEHPWITAN 260
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQ-----SSDXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A Q + +++
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D + LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 65 PNILRLYGYFHD--ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 121
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 122 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 224
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 225 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDF--KQLYQTL-TDYDIRYYLYELLKALDYCHS 283
NIITL+ V D + L+ E + + K L Q ++ + + L+ + K ++Y HS
Sbjct: 82 NIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 284 MGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELL 337
G++HRD+KP N++ E+ LR+ D+G A+ E + + Y F PE+L
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL 197
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
Y D IL + F + + +PE IL R ++
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD---TPE-------EILTRIGSGKFT- 246
Query: 398 FVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
+ N + VS A D + K+L D ++RLTA++ + HP+
Sbjct: 247 -LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRY--- 63
++Y HS G++HRD+KP N++ E+ LR+ D+G A+ E + + Y
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTAN 190
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ--LVRIA 113
F PE+L Q YD D+WSLG +L +M+ PF +G + + L RI
Sbjct: 191 FVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS I H D+KP N+M+ + N +++LID+G+A G E+ + F PE+
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 189
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L I+ V
Sbjct: 190 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 233
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NIITL + ++ LI E V+ DF ++LT+ + +L ++L + Y HS
Sbjct: 76 NIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 284 MGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
I H D+KP N+M+ + N +++LID+G+A G E+ + F PE++
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 190
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS I H D+KP N+M+ + N +++LID+G+A G E+ + F PE+
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 182
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L I+ V
Sbjct: 183 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 226
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NIITL + ++ LI E V+ DF ++LT+ + +L ++L + Y HS
Sbjct: 69 NIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 284 MGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
I H D+KP N+M+ + N +++LID+G+A G E+ + F PE++
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 341 QYHIELDPRFADILGRHSRKRWERFV-HTENQHLVSPEALDF-LDKNILGRHSRKRWERF 398
+E D ++ F+ T+ + L + A+++ D+ E F
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE-----------EYF 235
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSR 447
+T S A DF+ +LL D R+T ++++H + I + R
Sbjct: 236 SNT------SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVR 278
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDF--KQLYQTL-TDYDIRYYLYELLKALDYCHS 283
NIITL+ V D + L+ E + + K L Q ++ + + L+ + K ++Y HS
Sbjct: 82 NIITLKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 284 MGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELL 337
G++HRD+KP N++ E+ LR+ D+G A+ E + + Y F PE+L
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL 197
Query: 338 ADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWER 397
Y D IL + F + + +PE IL R ++
Sbjct: 198 KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD---TPE-------EILTRIGSGKFT- 246
Query: 398 FVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
+ N + VS A D + K+L D ++RLTA++ + HP+
Sbjct: 247 -LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK---LRLIDWGLAEFYHPGQEYNVRVASRY--- 63
++Y HS G++HRD+KP N++ E+ LR+ D+G A+ E + + Y
Sbjct: 133 TVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTAN 190
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ--LVRIA 113
F PE+L Q YD D+WSLG +L +M+ PF +G + + L RI
Sbjct: 191 FVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
Y HS I H D+KP N+M+ + N +++LID+G+A G E+ + F PE+
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 115
+ +Y+ DMWS+G + ++ PF G + L I+ V
Sbjct: 204 V-NYEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 247
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NIITL + ++ LI E V+ DF ++LT+ + +L ++L + Y HS
Sbjct: 90 NIITLHDIFENKTD--VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 284 MGIMHRDVKPHNVMI---DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
I H D+KP N+M+ + N +++LID+G+A G E+ + F PE++
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
A+DYCH ++HRD+KP NV++D H N K+ D+GL+ G+ S + PE
Sbjct: 123 AVDYCHRHMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRDSCGSPNYAAPE 180
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+++ +D+WS G +L +++ PF
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
+II L V+ P ++ E+V+ D+ + + + + R ++L A+DYCH
Sbjct: 72 HIIKLYQVISTPTDFF--MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 284 MGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
++HRD+KP NV++D H N K+ D+GL+ G+ S + PE+++ Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-------------PGQEYN 56
AL Y HS GI+HR++KP N+ ID E+R +++ D+GLA+ H PG N
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 57 VR--VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + + + E+L Y+ +D +SLG + I+ PF G + + L ++
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRS 243
Query: 115 V 115
V
Sbjct: 244 V 244
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH 317
++L+AL Y HS GI+HR++KP N+ ID E+R +++ D+GLA+ H
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVH 167
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y H MGI+HRD+KP N++ E K+ + D+GL++ G + + + P
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDK 127
E+LA + Y ++D WS+G + ++ PF+ +D+ +LFE + K
Sbjct: 192 EVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDS--------------KLFEQILK 236
Query: 128 YHIELD-PRFADILGRAR 144
E D P + DI A+
Sbjct: 237 AEYEFDSPYWDDISDSAK 254
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFYHPGQ 320
T+ D + ++L A+ Y H MGI+HRD+KP N++ E K+ + D+GL++ G
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
+ + + PE+LA Y +D ++ +++
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA----------------YILLCGYPP 221
Query: 381 FLDKNILGRHSRKRWERFVHTENQH------LVSPEALDFLDKLLRYDHYERLTAREAMD 434
F D+N K +E+ + E + +S A DF+ L+ D +R T +A
Sbjct: 222 FYDEN-----DSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
Query: 435 HPYF 438
HP+
Sbjct: 277 HPWI 280
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 184
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 103 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 162
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 163 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 191
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 1 MRIATGASMALDYCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY 55
+R+ T ++AL CH ++HRD+KP NV +D + + ++L D+GLA + +++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDF 172
Query: 56 NVR-VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
V + Y+ PE + + Y+ D+WSLGC+L + PF
Sbjct: 173 AKEFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 32/223 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY-------QTLTDYDIRYYLYELLKALD 279
NI+ + D + T ++ E+ D + Q L + + + +L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 280 YCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKG 333
CH ++HRD+KP NV +D + + ++L D+GLA + +++ V + Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 334 PELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRK 393
PE + Y+ + +DI W + P F K + G+
Sbjct: 185 PEQMNRMSYNEK-----SDI--------WSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 394 RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ R + S E + + ++L Y R + E +++P
Sbjct: 232 KFRRIPYR-----YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 177
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 178 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 227
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 206 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 234
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 179 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 207
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 185
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 164 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 192
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 185
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 164 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 192
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
+ ++ + S +WSLG +L M+ PF H + V + + +E ++L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--CQHLIRWC 271
Query: 130 IELDP 134
+ L P
Sbjct: 272 LALRP 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 192 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 199
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 118 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 177
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 178 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 206
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 185
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 104 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 163
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 164 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 192
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 179 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 207
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 191 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 219
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 227
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 206 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 184
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 103 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 162
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 163 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 191
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
+ ++ + S +WSLG +L M+ PF H + V + + +E ++L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--CQHLIRWC 270
Query: 130 IELDP 134
+ L P
Sbjct: 271 LALRP 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 191 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 119 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 178
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 179 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 207
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 192 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
+ ++ + S +WSLG +L M+ PF H + V + + +E ++L ++
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--CQHLIRWC 271
Query: 130 IELDP 134
+ L P
Sbjct: 272 LALRP 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 192 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 220
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 180
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 159 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 187
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 191 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 219
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 102 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 161
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 162 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 190
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 227
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 206 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 234
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 212
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYH 129
+ ++ + S +WSLG +L M+ PF H + V + + +E ++L ++
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--CQHLIRWC 270
Query: 130 IELDP 134
+ L P
Sbjct: 271 LALRP 275
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 131 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 190
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 191 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 232
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 151 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 211 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 213
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 132 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 191
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 192 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 180
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 159 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 187
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 207
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 126 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 185
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 186 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 214
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 180
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 99 DFITERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSG 158
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 159 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 187
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ +CH+ G++HRD+K N++ID +L+LID+G Y +R + PE
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEW 219
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+ ++ + S +WSLG +L M+ PF H
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 254 DFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID +L+LID+G
Sbjct: 138 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQYH 343
Y +R + PE + ++YH
Sbjct: 198 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 226
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGT 226
++YQL +LG+G +S V + V + E L
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 227 NIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDYC 281
NI+ L D +S LIF+ V + F+ + + ++ D + + ++L+A+ +C
Sbjct: 71 NIVRLH----DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 282 HSMGIMHRDVKPHNVMIDH--ENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
H MG++HR++KP N+++ + ++L D+GLA E Q + + + PE+L
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 339 DYQYHIELDPRFADILGRHSRKRWERFVHTENQH----LVSPEALDFLDKNILGRHSRKR 394
Y +D ++ + F E+QH + A DF
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQIKAGAYDF---------PSPE 236
Query: 395 WERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
W+ V+PEA D ++K+L + +R+TA EA+ HP+
Sbjct: 237 WD---------TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDH--ENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
A+ +CH MG++HR++KP N+++ + ++L D+GLA E Q + + +
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y +D+W+ G +L ++ PF+
Sbjct: 182 PEVLRK-DPYGKPVDLWACGVILYILLVGYPPFW 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 5 TGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYF 64
T + AL YCHS ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDY 175
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG--HDNYDQLVRIAKVL------ 116
PE++ + +M+D +D+WSLG + + K PF + Y ++ R+
Sbjct: 176 LPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 117 GTEELFEYLDKYHIELDPRFADILGRARVYAD 148
G +L L K++ P ++L + A+
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHPWITAN 266
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 39/280 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
+D+++ R LG+GK+ V+ A QS +++
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVN-NTDFKQLYQTLTDYD---IRYYLYELLKALDYC 281
NI+ L D +R LI E+ T +++L Q L+ +D Y+ EL AL YC
Sbjct: 71 PNILRLYGYFHD-ATRV-YLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
HS ++HRD+KP N+++ +L++ D+G + + P + + PE++
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 342 YHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERF 398
+ ++D +L + +E + E +S F D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD--------------- 230
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
V+ A D + +LL+++ +R RE ++HP+
Sbjct: 231 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 26/187 (13%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE 321
L++ + R +++ A+ Y HS G HRD+KP N++ D E KL+LID+GL ++
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLCAKPKGNKD 163
Query: 322 YNVR--VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
Y+++ S + PEL+ Y LG + W + +++ L
Sbjct: 164 YHLQTCCGSLAYAAPELIQGKSY-----------LGSEA-DVWSMGILL---YVLMCGFL 208
Query: 380 DFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP--- 436
F D N++ + + ++ + +SP ++ L ++L+ D +R++ + ++HP
Sbjct: 209 PFDDDNVMALYKKIMRGKY---DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 265
Query: 437 --YFYPI 441
Y YP+
Sbjct: 266 QDYNYPV 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR--VASRYFKGP 67
A+ Y HS G HRD+KP N++ D E KL+LID+GL ++Y+++ S + P
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAP 178
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL-GTEELFEYLD 126
EL+ D+WS+G +L ++ PF D+ + + K++ G ++ ++L
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCGFLPF----DDDNVMALYKKIMRGKYDVPKWLS 234
Query: 127 KYHIELDPRFADILGRARVYADVNSHKPREYWDYESYVVDWGQQDDY 173
I L + + + R+ + P DY +Y V+W ++ +
Sbjct: 235 PSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY-NYPVEWQSKNPF 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + AL Y HS+ I++RD+KP N+++D + + L D+GL + E+N S +
Sbjct: 145 AAEIASALGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLCK---ENIEHN-STTSTF 199
Query: 64 FKGPELLAD----YQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE LA Q YD ++D W LG +L M++ PF+
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y E+ AL Y HS+ I++RD+KP N+++D + + L D+GL + E+N
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH-IVLTDFGLCK---ENIEHN-STT 196
Query: 328 SRYFKGPELLADYQYH 343
S + PE LA H
Sbjct: 197 STFCGTPEYLAPEVLH 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+DYCH ++HRD+KP NV++D H N K + D+GL+ G+ S + PE
Sbjct: 128 GVDYCHRHMVVHRDLKPENVLLDAHMNAK--IADFGLSNMMSDGEFLRXSCGSPNYAAPE 185
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
+++ +D+WS G +L +++ PF H
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 239 VSRTPALIFEHVNNTDFKQLYQ------TLTDYDIRYYLYELLKALDYCHSMGIMHRDVK 292
V TP+ IF + +L+ L + + R ++L +DYCH ++HRD+K
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 293 PHNVMID-HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
P NV++D H N K + D+GL+ G+ S + PE+++ Y
Sbjct: 144 PENVLLDAHMNAK--IADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 1 MRIATGASMALDYCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-HPGQE 54
+R+ T ++AL CH ++HRD+KP NV +D + + ++L D+GLA H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSF 172
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
V + Y+ PE + + Y+ D+WSLGC+L + PF
Sbjct: 173 AKTFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 32/223 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY-------QTLTDYDIRYYLYELLKALD 279
NI+ + D + T ++ E+ D + Q L + + + +L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 280 YCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKG 333
CH ++HRD+KP NV +D + + ++L D+GLA H V + Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 334 PELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRK 393
PE + Y+ + +DI W + P F K + G+
Sbjct: 185 PEQMNRMSYNEK-----SDI--------WSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 394 RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ R + S E + + ++L Y R + E +++P
Sbjct: 232 KFRRIPYR-----YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 244 ALIFEHVNNTDFKQLYQTLTDYDIRYYLY-------------------ELLKALDYCHSM 284
+L + TD + + DIRY++Y +++ L++ H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPELLADYQYH 343
I++RD+KP NV++D + +R+ D GLA GQ A F PELL +Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 344 IELD------PRFADILGRHS-RKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWE 396
+D + I R R R E+ + E + V +A+ + DK
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK------------ 415
Query: 397 RFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE-AMDHPYFYPIVKDQSRHTLPSSSP 455
SP + DF + LL+ D +RL R+ + D +P+ +D S L +
Sbjct: 416 ----------FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGML 465
Query: 456 TP 457
TP
Sbjct: 466 TP 467
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPE 68
L++ H I++RD+KP NV++D + +R+ D GLA GQ A F PE
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY 128
LL + YD+S+D ++LG L MI + PF + + +VL E+ Y DK+
Sbjct: 360 LLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF 416
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 1 MRIATGASMALDYCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-HPGQE 54
+R+ T ++AL CH ++HRD+KP NV +D + + ++L D+GLA H
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSF 172
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
V + Y+ PE + + Y+ D+WSLGC+L + PF
Sbjct: 173 AKAFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 32/223 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY-------QTLTDYDIRYYLYELLKALD 279
NI+ + D + T ++ E+ D + Q L + + + +L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 280 YCHSMG-----IMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-HPGQEYNVRVASRYFKG 333
CH ++HRD+KP NV +D + + ++L D+GLA H V + Y+
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 334 PELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRK 393
PE + Y+ + +DI W + P F K + G+
Sbjct: 185 PEQMNRMSYNEK-----SDI--------WSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 394 RWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
++ R + S E + + ++L Y R + E +++P
Sbjct: 232 KFRRIPYR-----YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 244 ALIFEHVNNTDFKQLYQTLTDYDIRYYLY-------------------ELLKALDYCHSM 284
+L + TD + + DIRY++Y +++ L++ H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPELLADYQYH 343
I++RD+KP NV++D + +R+ D GLA GQ A F PELL +Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 344 IELD------PRFADILGRHS-RKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWE 396
+D + I R R R E+ + E + V +A+ + DK
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK------------ 415
Query: 397 RFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE-AMDHPYFYPIVKDQSRHTLPSSSP 455
SP + DF + LL+ D +RL R+ + D +P+ +D S L +
Sbjct: 416 ----------FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGML 465
Query: 456 TP 457
TP
Sbjct: 466 TP 467
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPE 68
L++ H I++RD+KP NV++D + +R+ D GLA GQ A F PE
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY 128
LL + YD+S+D ++LG L MI + PF + + +VL E+ Y DK+
Sbjct: 360 LLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF 416
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 244 ALIFEHVNNTDFKQLYQTLTDYDIRYYLY-------------------ELLKALDYCHSM 284
+L + TD + + DIRY++Y +++ L++ H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPELLADYQYH 343
I++RD+KP NV++D + +R+ D GLA GQ A F PELL +Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 344 IELD------PRFADILGRHS-RKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWE 396
+D + I R R R E+ + E + V +A+ + DK
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK------------ 415
Query: 397 RFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE-AMDHPYFYPIVKDQSRHTLPSSSP 455
SP + DF + LL+ D +RL R+ + D +P+ +D S L +
Sbjct: 416 ----------FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGML 465
Query: 456 TP 457
TP
Sbjct: 466 TP 467
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPE 68
L++ H I++RD+KP NV++D + +R+ D GLA GQ A F PE
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY 128
LL + YD+S+D ++LG L MI + PF + + +VL E+ Y DK+
Sbjct: 360 LLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF 416
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 51/242 (21%)
Query: 244 ALIFEHVNNTDFKQLYQTLTDYDIRYYLY-------------------ELLKALDYCHSM 284
+L + TD + + DIRY++Y +++ L++ H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPELLADYQYH 343
I++RD+KP NV++D + +R+ D GLA GQ A F PELL +Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 344 IELD------PRFADILGRHS-RKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWE 396
+D + I R R R E+ + E + V +A+ + DK
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK------------ 415
Query: 397 RFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE-AMDHPYFYPIVKDQSRHTLPSSSP 455
SP + DF + LL+ D +RL R+ + D +P+ +D S L +
Sbjct: 416 ----------FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGML 465
Query: 456 TP 457
TP
Sbjct: 466 TP 467
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR-YFKGPE 68
L++ H I++RD+KP NV++D + +R+ D GLA GQ A F PE
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKY 128
LL + YD+S+D ++LG L MI + PF + + +VL E+ Y DK+
Sbjct: 360 LLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL--EQAVTYPDKF 416
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 39/283 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGT 226
D+YQL +G+G +S V + + + E L +
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 227 NIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDYC 281
NI+ L D +S L+F+ V + F+ + + ++ D + + ++L+A+ +C
Sbjct: 64 NIVRLH----DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 282 HSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
H MG++HRD+KP N+++ + + ++L D+GLA E Q + + + PE+L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 339 DYQYHIELDPRFAD----ILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKR 394
Y +D IL W+ H Q + A DF
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ-IKAGAYDF---------PSPE 229
Query: 395 WERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
W+ V+PEA + ++++L + +R+TA EA+ HP+
Sbjct: 230 WDT---------VTPEAKNLINQMLTINPAKRITAHEALKHPW 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
A+ +CH MG++HRD+KP N+++ + + ++L D+GLA E Q + + +
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLS 174
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L + Y +D+W+ G +L ++ PF+
Sbjct: 175 PEVLRK-EAYGKPVDIWACGVILYILLVGYPPFW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEIXINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL++ HS I+HRD+K NV++ E +RL D+G+ A+ Q+ + + + Y+ PE
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 69 LLADYQM----YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ M YDY D+WSLG L M + EP H + L++IAK
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVLLKIAK 236
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 257 QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEF 315
+L + LT+ I+ ++L+AL++ HS I+HRD+K NV++ E +RL D+G+ A+
Sbjct: 109 ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKN 167
Query: 316 YHPGQEYNVRVASRYFKGPELL 337
Q+ + + + Y+ PE++
Sbjct: 168 LKTLQKRDSFIGTPYWMAPEVV 189
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQ 320
+ + D + + ++L+ + Y H +GI HRD+KP N+++D E L++ D+GLA F + +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNR 159
Query: 321 E--YNVRVASRYFKGPELLADYQYHIE 345
E N + + PELL ++H E
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL++ HS I+HRD+K NV++ E +RL D+G+ A+ Q+ + + + Y+ PE
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 69 LLADYQM----YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ M YDY D+WSLG L M + EP H + L++IAK
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVLLKIAK 228
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 257 QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEF 315
+L + LT+ I+ ++L+AL++ HS I+HRD+K NV++ E +RL D+G+ A+
Sbjct: 101 ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKN 159
Query: 316 YHPGQEYNVRVASRYFKGPELL 337
Q+ + + + Y+ PE++
Sbjct: 160 LKTLQKRDSFIGTPYWMAPEVV 181
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 118 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 58
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 59 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 119 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 338 ADYQYHIE 345
++H E
Sbjct: 178 KRREFHAE 185
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ Y I+HRD+K N++I E+ ++LID+G A + G+ + + + PE+
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
L L+MWSLG L +++F + PF + + +
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI 241
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 269 YYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 328
Y +L+ A+ Y I+HRD+K N++I E+ ++LID+G A + G+ + +
Sbjct: 134 YIFRQLVSAVGYLRLKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGT 192
Query: 329 RYFKGPELLADYQY 342
+ PE+L Y
Sbjct: 193 IEYCAPEVLMGNPY 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLIDWGLAEFYHP 51
AL + H + H D+KP N++ + +N +R+ D+G A F H
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH- 193
Query: 52 GQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 111
+ + VA+R+++ PE++ + + D+WS+GC+L +R F H+N + LV
Sbjct: 194 -EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEY-YRGFTLFQTHENREHLVM 250
Query: 112 IAKVLG 117
+ K+LG
Sbjct: 251 MEKILG 256
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 48/234 (20%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLI 308
+R+ Y+L AL + H + H D+KP N++ + +N +R+
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 309 DWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKRWERFVH 367
D+G A F H + + VA+R+++ PE++ + + D IL + R H
Sbjct: 185 DFGSATFDH--EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242
Query: 368 TENQHLVSPEA-LDFLDKNILGRHSRKR--------WE------RFVHTENQHLVS---- 408
+HLV E L + +++ R +++ W+ R+V + L S
Sbjct: 243 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQ 302
Query: 409 -----PEALDFLDKLLRYDHYERLTAREAMDHPYFYPIV-KDQSRHTLPSSSPT 456
+ D + ++L +D +R+T EA+ HP+F + +++S HT S +P+
Sbjct: 303 DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT--SRNPS 354
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLIDWGLAEFYHP 51
AL + H + H D+KP N++ + +N +R+ D+G A F H
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH- 225
Query: 52 GQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 111
+ + VA+R+++ PE++ + + D+WS+GC+L +R F H+N + LV
Sbjct: 226 -EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEY-YRGFTLFQTHENREHLVM 282
Query: 112 IAKVLG 117
+ K+LG
Sbjct: 283 MEKILG 288
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLI 308
+R+ Y+L AL + H + H D+KP N++ + +N +R+
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 309 DWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKRWERFVH 367
D+G A F H + + VA+R+++ PE++ + + D IL + R H
Sbjct: 217 DFGSATFDH--EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 274
Query: 368 TENQHLVSPEA-LDFLDKNILGRHSRKR--------WE------RFVHTENQHLVS---- 408
+HLV E L + +++ R +++ W+ R+V + L S
Sbjct: 275 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQ 334
Query: 409 -----PEALDFLDKLLRYDHYERLTAREAMDHPYFYPIV-KDQSRHT 449
+ D + ++L +D +R+T EA+ HP+F + +++S HT
Sbjct: 335 DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT 381
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA--- 71
H + I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE++
Sbjct: 141 HKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 72 --DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
++ Y +DMWS G ++ +++ PF+H
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TL++ + R + LL+ + H + I+HRD+KP N+++D ++ ++L D+G + PG+
Sbjct: 120 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGE 178
Query: 321 EYNVRVASRYFKGPELLADYQ------YHIELDPRFADILGRHSRKRWERFVHTENQHLV 374
+ + + PE++ Y E+D ++ F H + ++
Sbjct: 179 KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 375 SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPE-------ALDFLDKLLRYDHYERL 427
R + + N SPE D + + L +R
Sbjct: 239 ----------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276
Query: 428 TAREAMDHPYFYPIVKDQSRH 448
TA EA+ HP+F V ++ RH
Sbjct: 277 TAEEALAHPFFQQYVVEEVRH 297
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 79/286 (27%)
Query: 246 IFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHEN 302
I + ++D K+L++T LT+ ++ LY LL + H GI+HRD+KP N +++ ++
Sbjct: 109 IVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN-QD 167
Query: 303 RKLRLIDWGLAEFYH-------------------PG-------QEYNVRVASRYFKGPEL 336
+++ D+GLA + PG ++ V +R+++ PEL
Sbjct: 168 CSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 227
Query: 337 L---ADYQYHIEL---DPRFADILG---RHSRKRWERF-------------------VHT 368
+ +Y I++ FA++L H RF VH
Sbjct: 228 ILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHE 287
Query: 369 ENQH---------LVSPEALDFLDKNILGRHSRKRWERFVHTENQHL------VSPEALD 413
++ + +P D K I + K + F + L +S E +D
Sbjct: 288 KSNRDQLNIIFNVIGTPPEEDL--KCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGID 345
Query: 414 FLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSSPTPIV 459
L+ +LR++ +R+T +A+ HPY +KD + L + S I+
Sbjct: 346 LLESMLRFNAQKRITIDKALSHPY----LKDVRKENLENFSTEKII 387
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 27/107 (25%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-------------------PG- 52
+ H GI+HRD+KP N +++ ++ +++ D+GLA + PG
Sbjct: 146 FIHESGIIHRDLKPANCLLN-QDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 53 ------QEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
++ V +R+++ PEL+ + Y S+D+WS GC+ A ++
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLIDWGLAEFYHP 51
AL + H + H D+KP N++ + +N +R+ D+G A F H
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH- 202
Query: 52 GQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 111
+ + VA+R+++ PE++ + + D+WS+GC+L +R F H+N + LV
Sbjct: 203 -EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEY-YRGFTLFQTHENREHLVM 259
Query: 112 IAKVLG 117
+ K+LG
Sbjct: 260 MEKILG 265
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDH------------------ENRKLRLI 308
+R+ Y+L AL + H + H D+KP N++ + +N +R+
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 309 DWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRKRWERFVH 367
D+G A F H + + VA+R+++ PE++ + + D IL + R H
Sbjct: 194 DFGSATFDH--EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 251
Query: 368 TENQHLVSPEA-LDFLDKNILGRHSRKR--------WE------RFVHTENQHLVS---- 408
+HLV E L + +++ R +++ W+ R+V + L S
Sbjct: 252 ENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQ 311
Query: 409 -----PEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQ 445
+ D + ++L +D +R+T EA+ HP+F + ++
Sbjct: 312 DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEE 353
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINA 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEIXINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE-NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
L + H +H D+KP N+M + + +L+LID+GL P Q V + F PE
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 220
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+A+ + Y DMWS+G + ++ PF G +N D+ +R K
Sbjct: 221 -VAEGKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK 263
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 16/194 (8%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHE-NRKLRLIDWGLAEFYHPGQEYNVRVAS 328
Y+ ++ K L + H +H D+KP N+M + + +L+LID+GL P Q V +
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 213
Query: 329 RYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILG 388
F PE+ D +L ++ E D +N+
Sbjct: 214 AEFAAPEVAEGKPVGYYTDMWSVGVLS---------YILLSGLSPFGGENDDETLRNV-- 262
Query: 389 RHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRH 448
K + + +S + DF+ KLL D R+T +A++HP+ P
Sbjct: 263 ----KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 318
Query: 449 TLPSSSPTPIVNSV 462
+PSS T I +S+
Sbjct: 319 QIPSSRYTKIRDSI 332
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE-NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
L + H +H D+KP N+M + + +L+LID+GL P Q V + F PE
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 326
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+A+ + Y DMWS+G + ++ PF G +N D+ +R K
Sbjct: 327 -VAEGKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK 369
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 16/194 (8%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHE-NRKLRLIDWGLAEFYHPGQEYNVRVAS 328
Y+ ++ K L + H +H D+KP N+M + + +L+LID+GL P Q V +
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 329 RYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILG 388
F PE+ D +L ++ E D +N+
Sbjct: 320 AEFAAPEVAEGKPVGYYTDMWSVGVLS---------YILLSGLSPFGGENDDETLRNV-- 368
Query: 389 RHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRH 448
K + + +S + DF+ KLL D R+T +A++HP+ P
Sbjct: 369 ----KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424
Query: 449 TLPSSSPTPIVNSV 462
+PSS T I +S+
Sbjct: 425 QIPSSRYTKIRDSI 438
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGD-MNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPEL 184
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 75 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 133 KYIVHRDLKAENLLLDGD-MNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 120 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEIXINK 60
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 61 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 121 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 338 ADYQYHIE 345
++H E
Sbjct: 180 KRREFHAE 187
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA--- 71
H + I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE++
Sbjct: 141 HKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 72 --DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
++ Y +DMWS G ++ +++ PF+H
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TL++ + R + LL+ + H + I+HRD+KP N+++D ++ ++L D+G + PG+
Sbjct: 120 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGE 178
Query: 321 EYNVRVASRYFKGPELLADYQ------YHIELDPRFADILGRHSRKRWERFVHTENQHLV 374
+ + + PE++ Y E+D ++ F H + ++
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 375 SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPE-------ALDFLDKLLRYDHYERL 427
R + + N SPE D + + L +R
Sbjct: 239 ----------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276
Query: 428 TAREAMDHPYFYPIVKDQSRH 448
TA EA+ HP+F V ++ RH
Sbjct: 277 TAEEALAHPFFQQYVVEEVRH 297
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPEL 181
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T LI E+ + D+ + + + + R +++ A+ YCH
Sbjct: 72 NIVKLFEVIE--TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 130 KRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPEL 69
Y H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PEL
Sbjct: 119 YLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 108
L + + +D+WS G +L +M+ + P+ D+ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIIT 230
+D+ LV+ LG G Y EV A+N + + EN++ I
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP------ENIKKEICINK 59
Query: 231 L---QAVVKDPVSRTPA----LIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDY 280
+ + VVK R L E+ + + + + + D + + ++L+ + Y
Sbjct: 60 MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQE--YNVRVASRYFKGPELL 337
H +GI HRD+KP N+++D E L++ D+GLA F + +E N + + PELL
Sbjct: 120 LHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 338 ADYQYHIE 345
++H E
Sbjct: 179 KRREFHAE 186
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLA--- 71
H + I+HRD+KP N+++D ++ ++L D+G + PG++ + + PE++
Sbjct: 128 HKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 72 --DYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
++ Y +DMWS G ++ +++ PF+H
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 36/191 (18%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TL++ + R + LL+ + H + I+HRD+KP N+++D ++ ++L D+G + PG+
Sbjct: 107 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-DDMNIKLTDFGFSCQLDPGE 165
Query: 321 EYNVRVASRYFKGPELLADYQ------YHIELDPRFADILGRHSRKRWERFVHTENQHLV 374
+ + + PE++ Y E+D ++ F H + ++
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 375 SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPE-------ALDFLDKLLRYDHYERL 427
R + + N SPE D + + L +R
Sbjct: 226 ----------------------RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 263
Query: 428 TAREAMDHPYF 438
TA EA+ HP+F
Sbjct: 264 TAEEALAHPFF 274
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG-QEYNVRVASR 62
A + L + HS GI++RD+K N+++D + +++ D+G+ + G + N +
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
+ PE+L Q Y++S+D WS G +L M+ + P FHG D
Sbjct: 183 DYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSP-FHGQD 222
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIR---YYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E++N D Q+ +D+ +Y E++ L + HS GI++RD+K N+++D +
Sbjct: 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 154
Query: 302 NRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLADYQYHIELD 347
+++ D+G+ + G + N + + PE+L +Y+ +D
Sbjct: 155 GH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVD 200
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + + + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + + + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL Y H+ G++HRD+K ++++ + R ++L D+G A+ + V + Y+ PE
Sbjct: 153 ALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE 211
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
+++ Y +D+WSLG M+ MI + P+F+
Sbjct: 212 VISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFN 243
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQ 320
+ + I +L+AL Y H+ G++HRD+K ++++ + R ++L D+G A+
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVP 196
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
+ V + Y+ PE+++ Y E+D W + P
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVD-------------IWSLGIMVIEMIDGEPP--- 240
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ ++ L R R ++ H VS FLD +L + +R TA+E + HP+
Sbjct: 241 YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG----LAEFYHPGQEYN 56
+ + A AL++ H GI+HRDVKP N+MI N ++++D+G +A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTA 177
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + PE A D D++SLGC+L ++ + PF
Sbjct: 178 AVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N+MI N ++++D+G+A
Sbjct: 143 KPANIMISATN-AVKVMDFGIA 163
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG----LAEFYHPGQEYN 56
+ + A AL++ H GI+HRDVKP N+MI N ++++D+G +A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTA 177
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + PE A D D++SLGC+L ++ + PF
Sbjct: 178 AVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N+MI N ++++D+G+A
Sbjct: 143 KPANIMISATN-AVKVMDFGIA 163
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG----LAEFYHPGQEYN 56
+ + A AL++ H GI+HRDVKP N+MI N ++++D+G +A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTA 177
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + PE A D D++SLGC+L ++ + PF
Sbjct: 178 AVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N+MI N ++++D+G+A
Sbjct: 143 KPANIMISATN-AVKVMDFGIA 163
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 118 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 176
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 172 DYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGTN 227
+Y+L++ +G+G +++V A ++ + E + N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHSM 284
I+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 68 IVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 126 FIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG----LAEFYHPGQEYNVRVASR 62
A AL++ H GI+HRDVKP N+MI N ++++D+G +A+ + + + +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ PE A D D++SLGC+L ++ + PF
Sbjct: 184 QYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N+MI N ++++D+G+A
Sbjct: 143 KPANIMISATN-AVKVMDFGIA 163
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG-QEYNVRVASR 62
A + L + HS GI++RD+K N+++D + +++ D+G+ + G + N +
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
+ PE+L Q Y++S+D WS G +L M+ + P FHG D
Sbjct: 184 DYIAPEILLG-QKYNHSVDWWSFGVLLYEMLIGQSP-FHGQD 223
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIR---YYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E++N D Q+ +D+ +Y E++ L + HS GI++RD+K N+++D +
Sbjct: 96 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD 155
Query: 302 NRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLADYQYHIELD 347
+++ D+G+ + G + N + + PE+L +Y+ +D
Sbjct: 156 GH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVD 201
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG----LAEFYHPGQEYN 56
+ + A AL++ H GI+HRDVKP N+MI N ++++D+G +A+ + +
Sbjct: 136 IEVIADACQALNFSHQNGIIHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTA 194
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + PE A D D++SLGC+L ++ + PF
Sbjct: 195 AVIGTAQYLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 100 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 159
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N+MI N ++++D+G+A
Sbjct: 160 KPANIMISATN-AVKVMDFGIA 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG-----QEY 55
+ + A AL++ H GI+HRDVKP N++I N ++++D+G+A Q
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATN-AVKVVDFGIARAIADSGNSVXQTA 177
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
V ++Y + D D D++SLGC+L ++ + PF
Sbjct: 178 AVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVLTGEPPF 219
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 235 VKDPVSRTPALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSMGIMHRDV 291
+ P P ++ E+V+ + + T +T + + +AL++ H GI+HRDV
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDV 142
Query: 292 KPHNVMIDHENRKLRLIDWGLA 313
KP N++I N ++++D+G+A
Sbjct: 143 KPANILISATN-AVKVVDFGIA 163
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + + + PEL
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPEL 184
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T LI E+ + D+ + + + + R +++ A+ YCH
Sbjct: 75 NIVKLFEVIE--TEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + + + PEL +Y
Sbjct: 133 KRIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 28/215 (13%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNV--MIDHENRKLRLIDWGLAEFYHPGQ 320
T+ D + ++L A+ Y H GI+HRD+KP N+ + EN K+ + D+GL++ G
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
+ + + PE+LA Y +D W V T P +
Sbjct: 164 -MSTACGTPGYVAPEVLAQKPYSKAVDC-------------WSIGVITYILLCGYPPFYE 209
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY--- 437
+ + + +E + +S A DF+ LL D ER T +A+ HP+
Sbjct: 210 ETESKLFEKIKEGYYE--FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267
Query: 438 -------FYPIVKDQSRHTLPSSSPTPIVNSVPVV 465
YP V Q + S N+ VV
Sbjct: 268 NTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVV 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNV--MIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y H GI+HRD+KP N+ + EN K+ + D+GL++ G + + + P
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACGTPGYVAP 176
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+LA + Y ++D WS+G + ++ PF+
Sbjct: 177 EVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP---GQEYNVRVASRYFKG 66
+ + H M I+HRD+KP N++ID N+ L++ D+G+A+ Q +V +YF
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILID-SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF-S 180
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE A + D D++S+G +L M+ + PF
Sbjct: 181 PE-QAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ ++L + + H M I+HRD+KP N++ID N+ L++ D+G+A+
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILID-SNKTLKIFDFGIAK 159
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + S + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDY------DIRYYLYELLKALDY 280
NI+ + V+ P A+I E+ + +LY+ + + + R++ +LL + Y
Sbjct: 77 NIVRFKEVILTPTHL--AIIMEYASG---GELYERICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 281 CHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD 339
CHSM I HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 132 CHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 340 YQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+Y D + AD+ W V +++ A F D R RK +R +
Sbjct: 192 QEY----DGKIADV--------WSCGV---TLYVMLVGAYPFEDPE-EPRDYRKTIQRIL 235
Query: 400 HTE----NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + +SPE + ++ D R++ E H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ YCHSM I HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187
Query: 69 LLADYQMYDYSL-DMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 119
+L Q YD + D+WS G L M+ PF + D I ++L +
Sbjct: 188 VLL-RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
A+ YCH I+HRD+K N+++D + +++ D+G + + G + + + + PEL
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPEL 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D+WSLG +L +++ PF
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYDIRYYLYELLKALDYCHS 283
NI+ L V++ +T L+ E+ + D+ + + + + R +++ A+ YCH
Sbjct: 74 NIVKLFEVIE--TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
I+HRD+K N+++D + +++ D+G + + G + + + + PEL +Y
Sbjct: 132 KFIVHRDLKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
AL++ HS ++HRD+K N+++ + ++L D+G P Q + + V + Y+ PE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
++ + Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVR 325
I E L+AL++ HS ++HRD+K N+++ + ++L D+G P Q + +
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTM 176
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
V + Y+ PE++ Y ++D I+ ++ E +L++N
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI---------------EMIEGEP-PYLNEN 220
Query: 386 ILGRHSRKRWERFVHTENQ-HLVSPEAL-----DFLDKLLRYDHYERLTAREAMDHPYFY 439
L R + T L +PE L DFL++ L D +R +A+E + H F
Sbjct: 221 PL------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH-QFL 273
Query: 440 PIVKDQSRHTLPSSSPTPIVNSV 462
I K P SS TP++ +
Sbjct: 274 KIAK-------PLSSLTPLIAAA 289
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + + + V + + PE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPE 360
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L YD S D +SLGCML ++ PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
++ D+R+Y E++ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + +
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKK 346
Query: 321 EYNVRVASRYFKGPELL 337
+ V + + PE+L
Sbjct: 347 PH-ASVGTHGYMAPEVL 362
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + + + V + + PE
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPE 359
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L YD S D +SLGCML ++ PF
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
++ D+R+Y E++ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + +
Sbjct: 287 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKK 345
Query: 321 EYNVRVASRYFKGPELL 337
+ V + + PE+L
Sbjct: 346 PH-ASVGTHGYMAPEVL 361
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + + + V + + PE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPE 360
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L YD S D +SLGCML ++ PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
++ D+R+Y E++ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + +
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKK 346
Query: 321 EYNVRVASRYFKGPELL 337
+ V + + PE+L
Sbjct: 347 PH-ASVGTHGYMAPEVL 362
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + + + V + + PE
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPE 360
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L YD S D +SLGCML ++ PF
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
++ D+R+Y E++ L++ H+ +++RD+KP N+++D E+ +R+ D GLA + +
Sbjct: 288 VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-EHGHVRISDLGLACDFSKKK 346
Query: 321 EYNVRVASRYFKGPELL 337
+ V + + PE+L
Sbjct: 347 PH-ASVGTHGYMAPEVL 362
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYH--------PGQEYNV 57
+ ALD+ H+ GI HRD+KP N++ +H N+ +++ D+GL E
Sbjct: 121 ASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 58 RVASRYFKGPELLADY----QMYDYSLDMWSLGCMLASMIFRKEPF 99
S + PE++ + +YD D+WSLG +L ++ PF
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 48/226 (21%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYH-- 317
+ + + ++ ALD+ H+ GI HRD+KP N++ +H N+ +++ D+GL
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 318 ------PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADI-----------------L 354
E S + PE++ + + + D+ +
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 355 GR-HSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALD 413
GR S W+R P + L ++I ++E F + H +S A D
Sbjct: 228 GRCGSDCGWDR-------GEACPACQNMLFESI----QEGKYE-FPDKDWAH-ISCAAKD 274
Query: 414 FLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSSPTPIV 459
+ KLL D +RL+A + + HP+ + +TL PTP+V
Sbjct: 275 LISKLLVRDAKQRLSAAQVLQHPWVQGCAPE---NTL----PTPMV 313
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 225
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 226 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 437 YF 438
+
Sbjct: 277 WL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 225
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 226 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 437 YF 438
+
Sbjct: 277 WL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 231
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 232 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 282
Query: 437 YF 438
+
Sbjct: 283 WL 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 224
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 225 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 275
Query: 437 YF 438
+
Sbjct: 276 WL 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 225
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 226 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 276
Query: 437 YF 438
+
Sbjct: 277 WL 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
AL++ HS ++HRD+K N+++ + ++L D+G P Q + + V + Y+ PE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
++ + Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVR 325
I E L+AL++ HS ++HRD+K N+++ + ++L D+G P Q + +
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXM 176
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
V + Y+ PE++ Y ++D I+ ++ E +L++N
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI---------------EMIEGEP-PYLNEN 220
Query: 386 ILGRHSRKRWERFVHTENQ-HLVSPEAL-----DFLDKLLRYDHYERLTAREAMDHPYFY 439
L R + T L +PE L DFL++ L D +R +A+E + H F
Sbjct: 221 PL------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-QFL 273
Query: 440 PIVKDQSRHTLPSSSPTPIVNSV 462
I K P SS TP++ +
Sbjct: 274 KIAK-------PLSSLTPLIAAA 289
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
AL++ HS ++HRD+K N+++ + ++L D+G P Q + + V + Y+ PE
Sbjct: 129 ALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
++ + Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 188 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 237
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVR 325
I E L+AL++ HS ++HRD+K N+++ + ++L D+G P Q + +
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXM 177
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
V + Y+ PE++ Y ++D I+ ++ E +L++N
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI---------------EMIEGEP-PYLNEN 221
Query: 386 ILGRHSRKRWERFVHTENQ-HLVSPEAL-----DFLDKLLRYDHYERLTAREAMDHPYFY 439
L R + T L +PE L DFL++ L D +R +A+E + H F
Sbjct: 222 PL------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH-QFL 274
Query: 440 PIVKDQSRHTLPSSSPTPIVNS 461
I K P SS TP++ +
Sbjct: 275 KIAK-------PLSSLTPLIAA 289
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 364
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 365 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 415
Query: 437 YF 438
+
Sbjct: 416 WL 417
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ + HS I HRDVKP N++ + + L+L D+G A+ + Y+ P
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 179
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L + YD S DMWSLG ++ ++ PF+
Sbjct: 180 EVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFY 211
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYH 317
Q T+ + + ++ A+ + HS I HRDVKP N++ + + L+L D+G A+
Sbjct: 104 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ET 162
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F Q +SP
Sbjct: 163 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-AISP- 220
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G R R ++ + VS +A + LL+ D ERLT + M+HP
Sbjct: 221 ----------GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 270
Query: 437 YF 438
+
Sbjct: 271 WI 272
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 19/182 (10%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPG 319
L + + Y Y++L A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 320 QEYNVRVASRYFKGPELLADY---QYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + PE+L Y+ +D ++ + F Q
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 350
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
+ D+ G+++ F+ E VS +ALD + KLL D R T EA+ HP
Sbjct: 351 --VSLKDQITSGKYN------FI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401
Query: 437 YF 438
+
Sbjct: 402 WL 403
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+A+ Y H GI+HRD+KP NV++ E+ +++ D+G ++ + +
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 67 PELLADYQM--YDYSLDMWSLGCMLASMIFRKEPF 99
PE+L Y+ ++D WSLG +L + PF
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ + HS I HRDVKP N++ + + L+L D+G A+ + Y+ P
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 198
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L + YD S DMWSLG ++ ++ PF+
Sbjct: 199 EVLGP-EKYDKSCDMWSLGVIMYILLCGFPPFY 230
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK--LRLIDWGLAEFYH 317
Q T+ + + ++ A+ + HS I HRDVKP N++ + + L+L D+G A+
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ET 181
Query: 318 PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPE 377
+ Y+ PE+L +Y D ++ + F Q +SP
Sbjct: 182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-AISP- 239
Query: 378 ALDFLDKNILGRHSRKRWERFVHTENQ-HLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
G R R ++ + VS +A + LL+ D ERLT + M+HP
Sbjct: 240 ----------GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289
Query: 437 YF 438
+
Sbjct: 290 WI 291
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 28/131 (21%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID------------------------HENRKLRLIDWGL 45
AL+Y M + H D+KP N+++D ++ ++LID+G
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 46 AEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 105
A F + + +R ++ PE++ + +D S DMWS GC+LA + + F H++
Sbjct: 209 ATF--KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAEL-YTGSLLFRTHEH 264
Query: 106 YDQLVRIAKVL 116
+ L + ++
Sbjct: 265 MEHLAMMESII 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 266 DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID------------------------HE 301
DI+ Y E+LKAL+Y M + H D+KP N+++D +
Sbjct: 138 DIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADILGRHSRK 360
+ ++LID+G A F + + +R ++ PE++ + + + D F +L
Sbjct: 198 STGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Query: 361 RWERFVHTENQHLVSPEA-LDFLDKNILGRHSRKRWERFVHTENQHLVSPE 410
H +HL E+ + + KN+L ++ ++V+ + L PE
Sbjct: 256 SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPE 68
AL++ HS ++HRD+K N+++ + ++L D+G P Q V + Y+ PE
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
++ + Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 187 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR- 325
I E L+AL++ HS ++HRD+K N+++ + ++L D+G P Q
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEM 176
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
V + Y+ PE++ Y ++D I+ ++ E +L++N
Sbjct: 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI---------------EMIEGEP-PYLNEN 220
Query: 386 ILGRHSRKRWERFVHTENQ-HLVSPEAL-----DFLDKLLRYDHYERLTAREAMDHPYFY 439
L R + T L +PE L DFL++ L D +R +A+E + H F
Sbjct: 221 PL------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH-QFL 273
Query: 440 PIVKDQSRHTLPSSSPTPIVNSV 462
I K P SS TP++ +
Sbjct: 274 KIAK-------PLSSLTPLIAAA 289
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+GLA+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGLAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+GLA+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGLAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 13 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 71
Y HS GI+HRD+ N+++ N +++ D+GLA + P +++ + + PE+ A
Sbjct: 127 YLHSHGILHRDLTLSNLLLT-RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI-A 184
Query: 72 DYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ D+WSLGCM +++ + PF
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 25/199 (12%)
Query: 245 LIFEHVNNTD----FKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDH 300
L+ E +N + K + ++ + R+++++++ + Y HS GI+HRD+ N+++
Sbjct: 88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT- 146
Query: 301 ENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSR 359
N +++ D+GLA + P +++ + + PE+ + +E D
Sbjct: 147 RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDV----------- 195
Query: 360 KRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLL 419
W + P KN L + +E +S EA D + +LL
Sbjct: 196 --WSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM------PSFLSIEAKDLIHQLL 247
Query: 420 RYDHYERLTAREAMDHPYF 438
R + +RL+ +DHP+
Sbjct: 248 RRNPADRLSLSSVLDHPFM 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A S+ L + H GI++RD+K NVM+D E +++ D+G+ + + V +R
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGH-IKIADFGMCK-----EHMMDGVTTRE 179
Query: 64 FKG------PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
F G PE++A YQ Y S+D W+ G +L M+ + PF
Sbjct: 180 FCGTPDYIAPEIIA-YQPYGKSVDWWAYGVLLYEMLAGQPPF 220
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 245 LIFEHVNNTDFKQLYQTLTDY---DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + + +Y E+ L + H GI++RD+K NVM+D E
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 156
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG------PELLADYQYHIELD 347
+++ D+G+ + + V +R F G PE++A Y +D
Sbjct: 157 GH-IKIADFGMCK-----EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
AL++ HS ++HR++K N+++ + ++L D+G P Q + + V + Y+ PE
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEEL 121
++ + Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 188 VVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 237
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVR 325
I E L+AL++ HS ++HR++K N+++ + ++L D+G P Q + +
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTM 177
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
V + Y+ PE++ Y ++D I+ ++ E +L++N
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAI---------------EMIEGEP-PYLNEN 221
Query: 386 ILGRHSRKRWERFVHTENQ-HLVSPEAL-----DFLDKLLRYDHYERLTAREAMDHPYFY 439
L R + T L +PE L DFL++ L D +R +A+E + H F
Sbjct: 222 PL------RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQH-QFL 274
Query: 440 PIVKDQSRHTLPSSSPTPIVNS 461
I K P SS TP++ +
Sbjct: 275 KIAK-------PLSSLTPLIAA 289
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+GLA+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGLAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+GLA+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGLAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 2 RIATGASMALDYC-HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+I AL++ ++ I+HRD+KP N+++D ++L D+G++
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN-IKLCDFGISGQLVDSIAKTRDAG 187
Query: 61 SRYFKGPELL---ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
R + PE + A Q YD D+WSLG L + + P+ + +DQL ++ K
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 33/176 (18%)
Query: 275 LKALDYC-HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 333
+KAL++ ++ I+HRD+KP N+++D ++L D+G++ R +
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGN-IKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 334 PELLADYQYHIELDPRFADI-----------LGRHSRKRWERFVHTENQHLVSPEALDFL 382
PE + D R +D+ GR +W D L
Sbjct: 194 PERIDPSASRQGYDVR-SDVWSLGITLYELATGRFPYPKWN-------------SVFDQL 239
Query: 383 DKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ + G + + + SP ++F++ L D +R +E + HP+
Sbjct: 240 TQVVKGDPPQ------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR----VASRYF 64
+ALD HSMG +HRDVKP N+++D L+L D+G +E VR V + +
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTC--MKMNKEGMVRCDTAVGTPDY 235
Query: 65 KGPELLADY---QMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y D WS+G L M+ PF+
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDI-----RYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
++ E++ D L +++YD+ R+Y E++ ALD HSMG +HRDVKP N+++D
Sbjct: 146 MVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 202
Query: 300 HENRKLRLIDWGLA 313
L+L D+G
Sbjct: 203 KSGH-LKLADFGTC 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR----VASRYF 64
+ALD HSMG +HRDVKP N+++D L+L D+G +E VR V + +
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTC--MKMNKEGMVRCDTAVGTPDY 240
Query: 65 KGPELLADY---QMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y D WS+G L M+ PF+
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDI-----RYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
++ E++ D L +++YD+ R+Y E++ ALD HSMG +HRDVKP N+++D
Sbjct: 151 MVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 300 HENRKLRLIDWGLA 313
L+L D+G
Sbjct: 208 KSGH-LKLADFGTC 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR----VASRYF 64
+ALD HSMG +HRDVKP N+++D L+L D+G +E VR V + +
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTC--MKMNKEGMVRCDTAVGTPDY 240
Query: 65 KGPELLADY---QMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y D WS+G L M+ PF+
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDI-----RYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
++ E++ D L +++YD+ R+Y E++ ALD HSMG +HRDVKP N+++D
Sbjct: 151 MVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 207
Query: 300 HENRKLRLIDWGLA 313
L+L D+G
Sbjct: 208 KSGH-LKLADFGTC 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASR 62
A ++ L + S GI++RD+K NVM+D E +++ D+G+ E G +
Sbjct: 127 AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTP 185
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
+ PE++A YQ Y S+D W+ G +L M+ + P F G D
Sbjct: 186 DYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAP-FEGED 225
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + + +Y E+ L + S GI++RD+K NVM+D E
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 157
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+++ D+G+ E G + + PE++A Y +D
Sbjct: 158 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
++ YCHS GI+HR++KP N+++ + + ++L D+GLA + + ++ + + P
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L Y +D+W+ G +L ++ PF+
Sbjct: 177 EVLKK-DPYSKPVDIWACGVILYILLVGYPPFW 208
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQ 320
++ D + + ++L+++ YCHS GI+HR++KP N+++ + + ++L D+GLA + +
Sbjct: 103 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
++ + + PE+L Y +D ++ + F + L +
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 222
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
D + W+ V+PEA +D +L + +R+TA +A+ P+
Sbjct: 223 AYD------YPSPEWDT---------VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMI---DHE---------------NRKLRLIDWG 44
+A A+ + H + H D+KP N++ D+E + +R++D+G
Sbjct: 142 MAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG 201
Query: 45 LAEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 104
A F H + ++ V++R+++ PE++ + + D+WS+GC++ + F HD
Sbjct: 202 SATFDH--EHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEY-YVGFTLFQTHD 257
Query: 105 NYDQLVRIAKVLG 117
N + L + ++LG
Sbjct: 258 NREHLAMMERILG 270
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 96/220 (43%), Gaps = 51/220 (23%)
Query: 265 YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMI---DHE---------------NRKLR 306
+ +R+ ++L +A+ + H + H D+KP N++ D+E + +R
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 307 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLAD----------------YQYHIELDPRF 350
++D+G A F H + ++ V++R+++ PE++ + ++Y++ F
Sbjct: 197 VVDFGSATFDH--EHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF-TLF 253
Query: 351 ADILGRHSRKRWERFV---------HTENQHLVSPEALDFLDKNILGRHSR---KRWERF 398
R ER + T Q LD+ + GR+ R K R+
Sbjct: 254 QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRY 313
Query: 399 VHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +E + + D ++ +L Y+ +RLT EA+ HP+F
Sbjct: 314 LTSEAEE--HHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y H G +HRDVK N+++ E+ +++ D+G++ F G + + F G
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE++ + YD+ D+WS G + P+
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
L + I L E+L+ L+Y H G +HRDVK N+++ E+ +++ D+G++ F G
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGG 175
Query: 321 EYNVRVASRYFKG 333
+ + F G
Sbjct: 176 DITRNKVRKTFVG 188
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ V + + P
Sbjct: 126 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 185 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 215
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 168
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ V + + PE+L+ + E+D
Sbjct: 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ V + + P
Sbjct: 152 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 211 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 241
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 194
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ V + + PE+L+ + E+D
Sbjct: 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ V + + P
Sbjct: 150 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 209 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 239
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 192
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ V + + PE+L+ + E+D
Sbjct: 193 GERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
++ YCHS GI+HR++KP N+++ + + ++L D+GLA + + ++ + + P
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L Y +D+W+ G +L ++ PF+
Sbjct: 177 EVLKK-DPYSKPVDIWACGVILYILLVGYPPFW 208
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQ 320
++ D + + ++L+++ YCHS GI+HR++KP N+++ + + ++L D+GLA + +
Sbjct: 103 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
++ + + PE+L Y +D ++ + F + L +
Sbjct: 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 222
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
D + W+ V+PEA +D +L + +R+TA +A+ P+
Sbjct: 223 AYD------YPSPEWDT---------VTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y H G +HRDVK N+++ E+ +++ D+G++ F G + + F G
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE++ + YD+ D+WS G + P+
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
L + I L E+L+ L+Y H G +HRDVK N+++ E+ +++ D+G++ F G
Sbjct: 112 VLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGG 170
Query: 321 EYNVRVASRYFKG 333
+ + F G
Sbjct: 171 DITRNKVRKTFVG 183
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
++ YCHS GI+HR++KP N+++ + + ++L D+GLA + + ++ + + P
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 175
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L Y +D+W+ G +L ++ PF+
Sbjct: 176 EVLKK-DPYSKPVDIWACGVILYILLVGYPPFW 207
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQ 320
++ D + + ++L+++ YCHS GI+HR++KP N+++ + + ++L D+GLA + +
Sbjct: 102 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 161
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALD 380
++ + + PE+L Y +D ++ + F + L +
Sbjct: 162 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 221
Query: 381 FLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
D + W+ V+PEA +D +L + +R+TA +A+ P+
Sbjct: 222 AYD------YPSPEWD---------TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEY-NVRVASRYFKG 66
+ALD HSMG++HRDVKP N+++D L+L D+G + G + + V + +
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYIS 243
Query: 67 PELLADY---QMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y D WS+G L M+ PF+
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDI-----RYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
++ E++ D L +++YD+ ++Y E++ ALD HSMG++HRDVKP N+++D
Sbjct: 152 MVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 208
Query: 300 HENRKLRLIDWGLA 313
L+L D+G
Sbjct: 209 KHGH-LKLADFGTC 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 263 TDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQ 320
++ D + + ++L+++ YCHS GI+HR++KP N+++ + + ++L D+GLA + +
Sbjct: 126 SEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185
Query: 321 EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQH----LVSP 376
++ + + PE+L Y +D ++ + F E+QH +
Sbjct: 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLYAQIKA 244
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
A D+ W+ V+PEA +D +L + +R+TA +A+ P
Sbjct: 245 GAYDY---------PSPEWD---------TVTPEAKSLIDSMLTVNPKKRITADQALKVP 286
Query: 437 YF 438
+
Sbjct: 287 WI 288
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
++ YCHS GI+HR++KP N+++ + + ++L D+GLA + + ++ + + P
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L Y +D+W+ G +L ++ PF+
Sbjct: 200 EVLKK-DPYSKPVDIWACGVILYILLVGYPPFW 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYH--------P 51
R+ + ALD+ H+ GI HRD+KP N++ + + +++ D+ L
Sbjct: 115 RVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 52 GQEYNVRVASRYFKGPELLADY----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 107
E S + PE++ + YD D+WSLG +L M+ PF GH D
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV-GHCGAD 233
Query: 108 ------QLVRIAKVLGTEELFEYLDKYHIEL-DPRFADILGRAR 144
++ R+ + +LFE + + E D +A I A+
Sbjct: 234 CGWDRGEVCRVCQ----NKLFESIQEGKYEFPDKDWAHISSEAK 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 114/296 (38%), Gaps = 36/296 (12%)
Query: 170 QDDYQLVRKL-GRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENL---RGG 225
+D Y+L +L G G Y++V A+++Q+ +E L +G
Sbjct: 11 EDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIR---YYLYELLKALDYCH 282
NI+ L +D L+FE + Q ++ R + ++ ALD+ H
Sbjct: 71 KNILELIEFFEDDTRFY--LVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH 128
Query: 283 SMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADY 340
+ GI HRD+KP N++ + + +++ D+ L G + + PEL
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDL------GSGMKLNNSCTPITTPELTTPC 182
Query: 341 QYHIELDPRFADILGRHSR---KRWERFVHTENQHLVSPEALDFL---------DKNILG 388
+ P ++ + KR + + +++ F+ D+ +
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 389 RHSRKRWERFVHTENQHL-------VSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
R + + + +S EA D + KLL D +RL+A + + HP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASR 62
A ++ L + S GI++RD+K NVM+D E +++ D+G+ E G +
Sbjct: 448 AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTP 506
Query: 63 YFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ PE++A YQ Y S+D W+ G +L M+ + PF
Sbjct: 507 DYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQAPF 542
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E+VN D Q + + +Y E+ L + S GI++RD+K NVM+D E
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+++ D+G+ E G + + PE++A Y +D
Sbjct: 479 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 524
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPG 319
TL + I Y E+L+ L + H ++HRD+K NV++ EN +++L+D+G+ A+
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTV 183
Query: 320 QEYNVRVASRYFKGPELLA-----DYQYHIELDPRFADILGRHSRKRWERFVHTENQHLV 374
N + + Y+ PE++A D Y + D LG + + E + H +
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS---LGITAIEMAEGAPPLCDMHPM 240
Query: 375 SPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMD 434
AL + +N R K+W + + F++ L +H +R + M
Sbjct: 241 --RALFLIPRNPAPRLKSKKWSKKFQS------------FIESCLVKNHSQRPATEQLMK 286
Query: 435 HPYF 438
HP+
Sbjct: 287 HPFI 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
L + H ++HRD+K NV++ EN +++L+D+G+ A+ N + + Y+ PE
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 199
Query: 69 LLADYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
++A + YD+ D+WSLG M P H
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 21/216 (9%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHS 283
NII L+ + + P + L+ E V + F ++ + ++ D + ++L+A+ Y H
Sbjct: 109 NIIKLKEIFETPTEIS--LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 284 MGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQ 341
GI+HRD+KP N++ + L++ D+GL++ + + PE+L
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 342 YHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHT 401
Y E+D I+ +E F F+ + IL E + +
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQ--------FMFRRIL------NCEYYFIS 272
Query: 402 ENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
VS A D + KL+ D +RLT +A+ HP+
Sbjct: 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y H GI+HRD+KP N++ + L++ D+GL++ + + P
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP 219
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
E+L Y +DMWS+G + ++ EPF+
Sbjct: 220 EILRGCA-YGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKL--RLIDWGLAEFYHPGQEYNVRVASRYFK 65
S AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PELL + + Y ++D WS G + I PF
Sbjct: 191 APELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 224
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 243 PALIFEHVNNTDFKQLYQT------LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNV 296
P L E+ D ++ L + IR L ++ AL Y H I+HRD+KP N+
Sbjct: 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152
Query: 297 MIDHENRKL--RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++ ++L ++ID G A+ G+ V + + PELL +Y + +D
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 179 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 225
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 103 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 161
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 162 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 222 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 262
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 263 EHRFFLSI 270
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 158
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 219 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 260 EHRFFLSI 267
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKL--RLIDWGLAEFYHPGQEYNVRVASRYFK 65
S AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PELL + + Y ++D WS G + I PF
Sbjct: 192 APELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 225
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 243 PALIFEHVNNTDFKQLYQT------LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNV 296
P L E+ D ++ L + IR L ++ AL Y H I+HRD+KP N+
Sbjct: 94 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 153
Query: 297 MIDHENRKL--RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
++ ++L ++ID G A+ G+ V + + PELL +Y + +D
Sbjct: 154 VLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD 206
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 114/292 (39%), Gaps = 41/292 (14%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSS-----DXXXXXXXXXXXXXXXXXXXXXLENLRGG 225
DD+ +VR LG+GK+ V+ A Q+ +++
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 226 TNIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIR---YYLYELLKALDYCH 282
NI+ + D + L+ E + + Q +D + ++ EL AL YCH
Sbjct: 74 PNILRMYNYFHD--RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
++HRD+KP N+++ ++ +L++ D+G + + P + + PE++ +
Sbjct: 132 ERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 343 HIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
++D A +L ++ HTE + L F
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF------------------ 231
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLP 451
+S + D + KLLRY +RL + M+HP+ VK SR LP
Sbjct: 232 ----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW----VKANSRRVLP 275
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
AL YCH ++HRD+KP N+++ ++ +L++ D+G + + P + + PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + +D +D+W G + + PF
Sbjct: 184 I-EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 158
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 219 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 260 EHRFFLSI 267
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N+MID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYH--------PG 52
+ + ALD+ H+ GI HRD+KP N++ +H N+ +++ D+ L
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 53 QEYNVRVASRYFKGPELLADY----QMYDYSLDMWSLGCMLASMIFRKEPF 99
E S + PE++ + +YD D+WSLG +L ++ PF
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFYH-- 317
+ + + ++ ALD+ H+ GI HRD+KP N++ +H N+ +++ D+ L
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 318 ------PGQEYNVRVASRYFKGPELLADYQYHIELDPRFADI-----------------L 354
E S + PE++ + + + D+ +
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
Query: 355 GR-HSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALD 413
GR S W+R P + L ++I ++E F + H +S A D
Sbjct: 228 GRCGSDCGWDR-------GEACPACQNMLFESI----QEGKYE-FPDKDWAH-ISCAAKD 274
Query: 414 FLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSSPTPIV 459
+ KLL D +RL+A + + HP+ + +TL PTP+V
Sbjct: 275 LISKLLVRDAKQRLSAAQVLQHPWVQGCAPE---NTL----PTPMV 313
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
MALDY + I+HRD+KP N+++D E+ + + D+ +A + ++ + PE
Sbjct: 126 MALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPE 184
Query: 69 LLADYQ--MYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + Y +++D WSLG ++ + P+
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV 326
++ ++ EL+ ALDY + I+HRD+KP N+++D E+ + + D+ +A +
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMA 175
Query: 327 ASRYFKGPELLA 338
++ + PE+ +
Sbjct: 176 GTKPYMAPEMFS 187
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE +++ D+GLA + Q+
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D + + D++S G +L ++ + P+ H +N DQ++
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH-INNRDQII 247
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 258 LYQTLTDYDIRYYLYELL-------KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDW 310
LY+ L + ++ +++L+ + +DY H+ I+HRD+K +N+ + HE +++ D+
Sbjct: 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDF 176
Query: 311 GLAEF---YHPGQEYNVRVASRYFKGPELL 337
GLA + Q+ S + PE++
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 158
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 219 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 260 EHRFFLSI 267
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 181 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 227
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 105 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 163
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 224 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 264
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 265 EHRFFLSI 272
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLXGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLXGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 237 DPVSRTPALIFEHVNNTDFKQLY-QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHN 295
DPV ++ E+V K+ Q L + YL E+L AL Y HS+G+++ D+KP N
Sbjct: 156 DPVGY---IVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN 212
Query: 296 VMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 337
+M+ E +L+LID G + + + F+ PE++
Sbjct: 213 IMLTEE--QLKLIDLGAVSRIN---SFGYLYGTPGFQAPEIV 249
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
AL Y HS+G+++ D+KP N+M+ E +L+LID G + + + F+ PE+
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLTEE--QLKLIDLGAVSRIN---SFGYLYGTPGFQAPEI 248
Query: 70 LADYQMYDYSLDMWSLGCMLASMIF--------------RKEPFFHGHDNYDQLVRIA 113
+ + D++++G LA++ +P +D+Y +L+R A
Sbjct: 249 VRTGPT--VATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRA 304
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 158
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 219 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 260 EHRFFLSI 267
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL+Y HS +++RD+K N+M+D + +++ D+GL E G + + PE
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIAKV 115
+L D Y ++D W LG ++ M+ + PF++ H+ +L+ + ++
Sbjct: 176 VLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ T+ R+Y E++ AL+Y HS +++RD+K N+M+D + +++ D+GL E
Sbjct: 100 RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISD 158
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEA 378
G + + PE+L D Y +D ++ F + +++ L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 379 LDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAM 433
++ + RF T +SPEA L LL+ D +RL A+E M
Sbjct: 219 MEEI--------------RFPRT-----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVM 259
Query: 434 DHPYFYPI 441
+H +F I
Sbjct: 260 EHRFFLSI 267
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 207
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKD 230
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLAGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLAGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDX----------XXXXXXXXXXXXXXXXXXXXLE 220
++++L++ LG G Y +VF + D LE
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 221 NLRGGTNIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKA 277
++R ++TL + LI +++N + F L Q T+++++ Y+ E++ A
Sbjct: 114 HIRQSPFLVTLHYAFQTETKL--HLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 278 LDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY 316
L++ H +GI++RD+K N+++D N + L D+GL++ +
Sbjct: 172 LEHLHKLGIIYRDIKLENILLD-SNGHVVLTDFGLSKEF 209
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQE--YNVRVASRYFK 65
+AL++ H +GI++RD+K N+++D N + L D+GL+ EF E Y+ Y
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLD-SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ +D ++D WSLG ++ ++ PF
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 178 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 103 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 160
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 161 TTSVVKDSQVGTVNYMPPEAIKD 183
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 123 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 106 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 163
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 164 TTSVVKDSQVGTVNYMPPEAIKD 186
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 207
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 208 TTSVVKDSQVGTVNYMPPEAIKD 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 196
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 179
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 180 TTSVVKDSQVGTVNYMPPEAIKD 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 13/106 (12%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG---LAEFYHPG-------QEY 55
G L+ H+ G HRD+KP N+++ E + + L+D G A + G Q++
Sbjct: 142 GICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 56 NVRVASRYFKGPELLA--DYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + ++ PEL + + + D D+WSLGC+L +M+F + P+
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG---LAEFYHP 318
LT+ I + L + + L+ H+ G HRD+KP N+++ E + + L+D G A +
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVE 189
Query: 319 G-------QEYNVRVASRYFKGPELLADYQYHIELDPR 349
G Q++ + + ++ PEL + Q H +D R
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFS-VQSHCVIDER 226
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMP 196
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 122 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 179
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 180 XXXVVKDSQVGTVNYMPPEAIKD 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP 224
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 225 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 207
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 208 TTSVVKDSQVGAVNYMPPEAIKD 230
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR---VASRYFKG 66
A+ H GI+H D+KP N +I + L+LID+G+A P V+ V + +
Sbjct: 119 AVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 67 PELLADYQ----------MYDYSLDMWSLGCMLASMIFRKEPF 99
PE + D D+WSLGC+L M + K PF
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+++ ++ + Y +L+A+ H GI+H D+KP N +I + L+LID+G+A P
Sbjct: 102 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPD 159
Query: 320 QEYNVR---VASRYFKGPELLAD 339
V+ V + + PE + D
Sbjct: 160 TTSVVKDSQVGTVNYMPPEAIKD 182
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 133 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWTLCGTPEY 190
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 191 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 225
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 130 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWTLCGT 187
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 188 PEYL-APEIILSKGYNKAVD 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE---FYHPGQEYNVRVASRYFKG 66
L Y H I+HRD+K NV+I+ + L++ D+G ++ +P E + +
Sbjct: 134 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGTLQYMA 191
Query: 67 PELL-ADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
PE++ + Y + D+WSLGC + M K PF+
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
I +Y ++L+ L Y H I+HRD+K NV+I+ + L++ D+G ++
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVRVASRYFKG 66
+A+D H + +HRD+KP NV++D N +RL D+G + G + +V V + +
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 67 PELLADYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI-AKVLGTEEL 121
PE+L + Y D WSLG + M++ + PF+ + LV K++ EE
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIMNHEER 315
Query: 122 FEY 124
F++
Sbjct: 316 FQF 318
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVR 325
R+Y+ E++ A+D H + +HRD+KP NV++D N +RL D+G + G + +V
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 326 VASRYFKGPELL 337
V + + PE+L
Sbjct: 253 VGTPDYISPEIL 264
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ + + P
Sbjct: 128 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 187 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 170
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L+ + E+D
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E+ +++L D+G+A Q + N V + ++ PE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD D+WSLG + A + R EP
Sbjct: 175 VIKQ-SAYDSKADIWSLG-ITAIELARGEP 202
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ- 320
L + I L E+LK LDY HS +HRD+K NV++ E+ +++L D+G+A Q
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQI 159
Query: 321 EYNVRVASRYFKGPELLADYQYHIELD 347
+ N V + ++ PE++ Y + D
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKAD 186
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ + + P
Sbjct: 132 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 191 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 221
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 174
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L+ + E+D
Sbjct: 175 GERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
+ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + + G+ + + P
Sbjct: 128 LGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+L+ + + + +D+WS+GC++ +++ K PF
Sbjct: 187 EVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ LT+ + RYYL +++ Y H ++HRD+K N+ ++ E+ ++++ D+GLA + +
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYD 170
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L+ + E+D
Sbjct: 171 GERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVRVASRYFKG 66
+A+D H + +HRD+KP NV++D N +RL D+G + G + +V V + +
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 67 PELLADYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI-AKVLGTEEL 121
PE+L + Y D WSLG + M++ + PF+ + LV K++ EE
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIMNHEER 299
Query: 122 FEY 124
F++
Sbjct: 300 FQF 302
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVR 325
R+Y+ E++ A+D H + +HRD+KP NV++D N +RL D+G + G + +V
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 326 VASRYFKGPELL 337
V + + PE+L
Sbjct: 237 VGTPDYISPEIL 248
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E+ +++L D+G+A Q + N V + ++ PE
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD D+WSLG + A + R EP
Sbjct: 195 VIKQ-SAYDSKADIWSLG-ITAIELARGEP 222
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ- 320
L + I L E+LK LDY HS +HRD+K NV++ E+ +++L D+G+A Q
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQI 179
Query: 321 EYNVRVASRYFKGPELLADYQYHIELD 347
+ N V + ++ PE++ Y + D
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKAD 206
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWTLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWTLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE---FYHPGQEYNVRVASRYFKG 66
L Y H I+HRD+K NV+I+ + L++ D+G ++ +P E + +
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGTLQYMA 177
Query: 67 PELL-ADYQMYDYSLDMWSLGCMLASMIFRKEPFFH 101
PE++ + Y + D+WSLGC + M K PF+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 213
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
I +Y ++L+ L Y H I+HRD+K NV+I+ + L++ D+G ++
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
++ EL AL YCH ++HRD+KP N+++ ++ +L++ D+G + + P +
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTL 176
Query: 330 YFKGPELLADYQYHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNI 386
+ PE++ + ++D A +L ++ HTE + L F
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF----- 231
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
+S + D + KLLRY +RL + M+HP+ VK S
Sbjct: 232 -----------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW----VKANS 270
Query: 447 RHTLP 451
R LP
Sbjct: 271 RRVLP 275
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
AL YCH ++HRD+KP N+++ ++ +L++ D+G + + P + + PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + +D +D+W G + + PF
Sbjct: 184 I-EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
++ EL AL YCH ++HRD+KP N+++ ++ +L++ D+G + + P +
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTL 177
Query: 330 YFKGPELLADYQYHIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNI 386
+ PE++ + ++D A +L ++ HTE + L F
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF----- 232
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
+S + D + KLLRY +RL + M+HP+ VK S
Sbjct: 233 -----------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW----VKANS 271
Query: 447 RHTLP 451
R LP
Sbjct: 272 RRVLP 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
AL YCH ++HRD+KP N+++ ++ +L++ D+G + + P + + PE+
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 184
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ + + +D +D+W G + + PF
Sbjct: 185 I-EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 142 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 199
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 200 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 234
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 139 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 196
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 197 PEYL-APEIILSKGYNKAVD 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYQMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP-GQEYNVRVA--SRYFKG 66
L+Y HS GI+H+D+KP N+++ L++ G+AE HP + R + S F+
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 67 PELLADYQMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
PE+ + + +D+WS G L ++ P F G + Y I K
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP-FEGDNIYKLFENIGK 227
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 76/195 (38%), Gaps = 28/195 (14%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP-GQEYNVRVA- 327
Y +L+ L+Y HS GI+H+D+KP N+++ L++ G+AE HP + R +
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 328 -SRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNI 386
S F+ PE+ D W V N ++ F NI
Sbjct: 173 GSPAFQPPEIANGL-----------DTFSGFKVDIWSAGVTLYN---ITTGLYPFEGDNI 218
Query: 387 LGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQS 446
+ + P D L +L Y+ +R + R+ H +F +
Sbjct: 219 YKLFENIGKGSYAIPGD---CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF------RK 269
Query: 447 RHTLPSSSPTPIVNS 461
+H P+ +P PI S
Sbjct: 270 KHP-PAEAPVPIPPS 283
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 197
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 198 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 137 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 194
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 195 PEYL-APEIILSKGYNKAVD 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 2 RIATGASMALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+IA AL++ HS + ++HRDVKP NV+I+ + +++ D+G++ + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVDSVAKTIDAG 215
Query: 61 SRYFKGPELL---ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE + + + Y D+WSLG + + + P+ + QL ++ +
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 34/190 (17%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
QT+ + + ++KAL++ HS + ++HRDVKP NV+I+ + +++ D+G++ +
Sbjct: 148 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVD 206
Query: 319 GQEYNVRVASRYFKGPEL----LADYQYHIELDPRFADI------LGRHSRKRWERFVHT 368
+ + + PE L Y ++ D I + R W
Sbjct: 207 SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 266
Query: 369 ENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT 428
Q + P DK S E +DF + L+ + ER T
Sbjct: 267 LKQVVEEPSPQLPADK----------------------FSAEFVDFTSQCLKKNSKERPT 304
Query: 429 AREAMDHPYF 438
E M HP+F
Sbjct: 305 YPELMQHPFF 314
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E+ +++L D+G+A Q + N V + ++ PE
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 189
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD D+WSLG + A + R EP
Sbjct: 190 VIKQ-SAYDSKADIWSLG-ITAIELARGEP 217
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ- 320
L + I L E+LK LDY HS +HRD+K NV++ E+ +++L D+G+A Q
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQI 174
Query: 321 EYNVRVASRYFKGPELLADYQYHIELD 347
+ N V + ++ PE++ Y + D
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKAD 201
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID E +++ D+G A+ G+ + + Y
Sbjct: 134 AAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAKRVK-GRTWXLCGTPEY 191
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 192 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 226
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID E +++ D+G A+ G+ + +
Sbjct: 131 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAKRVK-GRTWXLCGT 188
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 189 PEYL-APEIILSKGYNKAVD 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E+ +++L D+G+A Q + N V + ++ PE
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD D+WSLG + A + R EP
Sbjct: 175 VIKQ-SAYDSKADIWSLG-ITAIELARGEP 202
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ- 320
L + I L E+LK LDY HS +HRD+K NV++ E+ +++L D+G+A Q
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQI 159
Query: 321 EYNVRVASRYFKGPELLADYQYHIELD 347
+ N V + ++ PE++ Y + D
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKAD 186
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 197
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 198 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 137 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 194
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 195 PEYL-APEIILSKGYNKAVD 213
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIIISKGYNKAVD 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVRVASRYFKG 66
+A+D H + +HRD+KP N+++D N +RL D+G + G + +V V + +
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDM-NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 67 PELLADYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI-AKVLGTEEL 121
PE+L + Y D WSLG + M++ + PF+ + LV K++ +E
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA-----ESLVETYGKIMNHKER 299
Query: 122 FEY 124
F++
Sbjct: 300 FQF 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQ-EYNVR 325
R+YL E++ A+D H + +HRD+KP N+++D N +RL D+G + G + +V
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM-NGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 326 VASRYFKGPELL 337
V + + PE+L
Sbjct: 237 VGTPDYISPEIL 248
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G + + Y
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GATWTLCGTPEY 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 226 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GATWTLCGT 222
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 223 PEYL-APEIILSKGYNKAVD 241
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 201
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 202 PEYL-APEIILSKGYNKAVD 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 226 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 222
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 223 PEYL-APEIILSKGYNKAVD 241
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 205
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 206 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 202
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 203 PEYL-APEIILSKGYNKAVD 221
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 ALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
ALDY HS +++RD+K N+M+D + +++ D+GL E G + + P
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAP 321
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQL-----VRIAKVLGTE 119
E+L D Y ++D W LG ++ M+ + PF++ H+ +L +R + LG E
Sbjct: 322 EVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 378
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 39/188 (20%)
Query: 268 RYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVR 325
R+Y E++ ALDY HS +++RD+K N+M+D + +++ D+GL E G
Sbjct: 254 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTF 312
Query: 326 VASRYFKGPELLADYQYHIELD------PRFADILGRHSRKRWERFVHTENQHLVSPEAL 379
+ + PE+L D Y +D + + GR F + +++ L +
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP------FYNQDHEKLFELILM 366
Query: 380 DFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAMD 434
+ + RF T + PEA L LL+ D +RL A+E M
Sbjct: 367 EEI--------------RFPRT-----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 407
Query: 435 HPYFYPIV 442
H +F IV
Sbjct: 408 HRFFAGIV 415
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE++ + Y+ ++D W+LG ++ M PFF
Sbjct: 226 L-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGT 222
Query: 328 SRYFKGPELLADYQYHIELD 347
Y PE++ Y+ +D
Sbjct: 223 PEYL-APEIILSKGYNKAVD 241
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY-NVRVASRYFKG 66
+AL + H I+HRD+K N+ + + ++L D+G+A + E + + Y+
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 102
PE + + + Y+ D+W+LGC+L + K F G
Sbjct: 194 PE-ICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY-NVRVAS 328
+ ++ AL + H I+HRD+K N+ + + ++L D+G+A + E + +
Sbjct: 130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGT 188
Query: 329 RYFKGPELLADYQYHIELD 347
Y+ PE+ + Y+ + D
Sbjct: 189 PYYLSPEICENKPYNNKSD 207
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 170 QDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRG--GTN 227
D Y+LV+ +G G + V + + S+ + N R N
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPN 76
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHSM 284
I+ + V+ P A++ E+ + + F+++ ++ + R++ +L+ + YCH+M
Sbjct: 77 IVRFKEVILTPTHL--AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 285 GIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYH 343
+ HRD+K N ++D +L++ D+G ++ + V + + PE+L +Y
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY- 193
Query: 344 IELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTE- 402
D + AD+ W V +++ A F D ++ RK R ++ +
Sbjct: 194 ---DGKVADV--------WSCGV---TLYVMLVGAYPFEDPE-EPKNFRKTIHRILNVQY 238
Query: 403 ---NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +SPE + ++ D +R++ E +H +F
Sbjct: 239 AIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ YCH+M + HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + D+WS G L M+ PF
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
+ Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G+ + + PE
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + + + +D+WSLGC+L +++ K PF
Sbjct: 213 VLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ +T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA +
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFD 195
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L + E+D
Sbjct: 196 GERKKTLCGTPNYIAPEVLCKKGHSFEVD 224
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 ALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
ALDY HS +++RD+K N+M+D + +++ D+GL E G + + P
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAP 318
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQL-----VRIAKVLGTE 119
E+L D Y ++D W LG ++ M+ + PF++ H+ +L +R + LG E
Sbjct: 319 EVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 375
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 268 RYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVR 325
R+Y E++ ALDY HS +++RD+K N+M+D + +++ D+GL E G
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTF 309
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
+ + PE+L D Y +D ++ F + +++ L ++ +
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--- 366
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYFYP 440
RF T + PEA L LL+ D +RL A+E M H +F
Sbjct: 367 -----------RFPRT-----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
Query: 441 IV 442
IV
Sbjct: 411 IV 412
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHS 283
NI+ + V+ P A++ E+ + + F+++ ++ + R++ +L+ + YCH+
Sbjct: 75 NIVRFKEVILTPTHL--AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 284 MGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
M + HRD+K N ++D +L++ D+G ++ + V + + PE+L +Y
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 343 HIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTE 402
D + AD+ W V +++ A F D ++ RK R ++ +
Sbjct: 193 ----DGKVADV--------WSCGV---TLYVMLVGAYPFEDPE-EPKNFRKTIHRILNVQ 236
Query: 403 ----NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +SPE + ++ D +R++ E +H +F
Sbjct: 237 YAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ YCH+M + HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 126 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 185
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + D+WS G L M+ PF
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E ++L D+G+A Q + N V + ++ PE
Sbjct: 128 GLDYLHSERKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD+ D+WSLG + A + + EP
Sbjct: 187 VIKQ-SAYDFKADIWSLG-ITAIELAKGEP 214
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 267 IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVR 325
I L E+LK LDY HS +HRD+K NV++ E ++L D+G+A Q + N
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXF 176
Query: 326 VASRYFKGPELLADYQYHIELD 347
V + ++ PE++ Y + D
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKAD 198
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 2 RIATGASMALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+IA AL++ HS + ++HRDVKP NV+I+ + +++ D+G++ + ++
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVDDVAKDIDAG 171
Query: 61 SRYFKGPELL---ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE + + + Y D+WSLG + + + P+ + QL ++ +
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 34/190 (17%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
QT+ + + ++KAL++ HS + ++HRDVKP NV+I+ + +++ D+G++ +
Sbjct: 104 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKMCDFGISGYLVD 162
Query: 319 GQEYNVRVASRYFKGPEL----LADYQYHIELDPRFADI------LGRHSRKRWERFVHT 368
++ + + PE L Y ++ D I + R W
Sbjct: 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 222
Query: 369 ENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT 428
Q + P DK S E +DF + L+ + ER T
Sbjct: 223 LKQVVEEPSPQLPADK----------------------FSAEFVDFTSQCLKKNSKERPT 260
Query: 429 AREAMDHPYF 438
E M HP+F
Sbjct: 261 YPELMQHPFF 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
AL + H GI++RD+K NV++DHE +L D+G+ E G + + PE
Sbjct: 136 ALMFLHDKGIIYRDLKLDNVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPE 194
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + +Y ++D W++G +L M+ PF
Sbjct: 195 ILQE-MLYGPAVDWWAMGVLLYEMLCGHAPF 224
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYD---IRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E VN D Q +D R+Y E++ AL + H GI++RD+K NV++DHE
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 302 NRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLADYQYHIELD 347
+L D+G+ E G + + PE+L + Y +D
Sbjct: 161 GH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVD 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 13 YCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL 70
Y H I+H D+KP N+++ + ++++D+G++ E + + + PE+L
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL 205
Query: 71 ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEELFEYLDKY 128
+Y + DMW++G ++A M+ F G DN + + I++V +EE F + +
Sbjct: 206 -NYDPITTATDMWNIG-IIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 129 HIELDPRFADILGRARVYADVN-SHKPREYWDYES 162
+ R A++ SH + WD+E+
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN 298
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 257 QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID--HENRKLRLIDWGLAE 314
+L + +++ D+ + ++L+ + Y H I+H D+KP N+++ + ++++D+G++
Sbjct: 123 ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 315 FYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHL- 373
E + + + PE+L D I+ FV +NQ
Sbjct: 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242
Query: 374 --VSPEALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTARE 431
+S +D+ ++ VS A DF+ LL + +R TA
Sbjct: 243 LNISQVNVDYSEETFSS------------------VSQLATDFIQSLLVKNPEKRPTAEI 284
Query: 432 AMDHPYF 438
+ H +
Sbjct: 285 CLSHSWL 291
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 24/96 (25%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE------------------- 169
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
+ YD S DMWSLG ++ ++ PF+ H
Sbjct: 170 ---TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE--NRKLRLIDWGLAE 314
Q T+ + + + +A+ Y HS+ I HRDVKP N++ + N L+L D+G A+
Sbjct: 112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 134/349 (38%), Gaps = 115/349 (32%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQ 232
Y++V LG G + +V E I+ ++ GG ++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKA----------------------------GGRHVAV-- 45
Query: 233 AVVKD-----PVSRTPALIFEHVNNTDFKQLYQT---------------------LTDYD 266
+VK+ +R+ + EH+N TD ++ L+ YD
Sbjct: 46 KIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD 105
Query: 267 --------------IRYYLYELLKALDYCHSMGIMHRDVKPHNVM-------------ID 299
IR Y++ K++++ HS + H D+KP N++ I
Sbjct: 106 FIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165
Query: 300 HENRKL-----RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADI 353
+ R L +++D+G A + + ++ V++R+++ PE++ + D I
Sbjct: 166 RDERTLINPDIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCI 223
Query: 354 LGRHSRKRWERFVHTENQHLVSPE-ALDFLDKNILGR--------HSRKRWE------RF 398
L + H +HL E L L K+++ + H R W+ R+
Sbjct: 224 LIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRY 283
Query: 399 VHTENQHL--------VSPEAL-DFLDKLLRYDHYERLTAREAMDHPYF 438
V + L V E L D + K+L YD +R+T REA+ HP+F
Sbjct: 284 VSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVM-------------IDHENRKL-----RLIDW 43
++A ++++ HS + H D+KP N++ I + R L +++D+
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 44 GLAEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
G A + + ++ V++R+++ PE++ + D+WS+GC+L + F H
Sbjct: 182 GSATY--DDEHHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEY-YLGFTVFPTH 237
Query: 104 DNYDQLVRIAKVLG 117
D+ + L + ++LG
Sbjct: 238 DSKEHLAMMERILG 251
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ PE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 69 LL----ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ + + YDY D+WSLG L M EP H + L++IAK
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 160 YESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL 219
YE D +D ++++ +LG G + +V++A N ++S +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 220 ENLRGG--TNIITLQAVVKDPVSRTPALIFEHVNNTD--FKQLYQTLTDYDIRYYLYELL 275
+ L NI+ L + + F D +L + LT+ I+ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGP 334
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 204
Query: 335 ELL 337
E++
Sbjct: 205 EVV 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLATVKSRWSGSHQFEQLS 171
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 113
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++ +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQIIEMV 226
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 258 LYQTLTDYDIRYYL---YELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
L+ + T ++++ + + + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 98 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLA 155
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
+ Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G+ + + PE
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE 212
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + + + +D+WSLGC+L +++ K PF
Sbjct: 213 VLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ +T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA +
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFD 195
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L + E+D
Sbjct: 196 GERKKXLCGTPNYIAPEVLCKKGHSFEVD 224
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ PE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 69 LL----ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ + + YDY D+WSLG L M EP H + L++IAK
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 160 YESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL 219
YE D +D ++++ +LG G + +V++A N ++S +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 220 ENLRGG--TNIITLQAVVKDPVSRTPALIFEHVNNTD--FKQLYQTLTDYDIRYYLYELL 275
+ L NI+ L + + F D +L + LT+ I+ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGP 334
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAP 204
Query: 335 ELL 337
E++
Sbjct: 205 EVV 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 3 IATGASMALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 61
I + Y H+ I HRDVKP N+++D +N +++L D+G +E Y ++ +
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMD-KNGRVKLSDFGESE-YMVDKKIKGSRGT 213
Query: 62 RYFKGPELLADYQMYDYS-LDMWSLGCMLASMIFRKEPF 99
F PE ++ Y+ + +D+WSLG L M + PF
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Query: 267 IRYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 325
I+ + +L + Y H+ I HRDVKP N+++D +N +++L D+G +E Y ++
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD-KNGRVKLSDFGESE-YMVDKKIKGS 210
Query: 326 VASRYFKGPELLAD-----------YQYHIELDPRFADILGRHSRKRW-ERFVHTENQHL 373
+ F PE ++ + I L F +++ + E F + +++
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
Query: 374 VSPEALDFLDKN-ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREA 432
P LD+N L + K+ T + + +S E +DFL LR + ER+T+ +A
Sbjct: 271 EYP-----LDRNHFLYPLTNKK-----STCSNNFLSNEDIDFLKLFLRKNPAERITSEDA 320
Query: 433 MDHPYF 438
+ H +
Sbjct: 321 LKHEWL 326
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 ALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
ALDY HS +++RD+K N+M+D + +++ D+GL E G + + P
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQL-----VRIAKVLGTE 119
E+L D Y ++D W LG ++ M+ + PF++ H+ +L +R + LG E
Sbjct: 180 EVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 236
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 268 RYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVR 325
R+Y E++ ALDY HS +++RD+K N+M+D + +++ D+GL E G
Sbjct: 112 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXF 170
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
+ + PE+L D Y +D ++ F + +++ L ++ +
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--- 227
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYFYP 440
RF T + PEA L LL+ D +RL A+E M H +F
Sbjct: 228 -----------RFPRT-----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
Query: 441 IV 442
IV
Sbjct: 272 IV 273
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 ALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
ALDY HS +++RD+K N+M+D + +++ D+GL E G + + P
Sbjct: 122 ALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQL-----VRIAKVLGTE 119
E+L D Y ++D W LG ++ M+ + PF++ H+ +L +R + LG E
Sbjct: 181 EVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 237
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 268 RYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVR 325
R+Y E++ ALDY HS +++RD+K N+M+D + +++ D+GL E G
Sbjct: 113 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXF 171
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
+ + PE+L D Y +D ++ F + +++ L ++ +
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--- 228
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYFYP 440
RF T + PEA L LL+ D +RL A+E M H +F
Sbjct: 229 -----------RFPRT-----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
Query: 441 IV 442
IV
Sbjct: 273 IV 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPE 68
LDY HS +HRD+K NV++ E ++L D+G+A Q + N V + ++ PE
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 190
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEP 98
++ YD D+WSLG + A + + EP
Sbjct: 191 VIQQ-SAYDSKADIWSLG-ITAIELAKGEP 218
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EY 322
++ I L E+LK LDY HS +HRD+K NV++ E ++L D+G+A Q +
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKR 177
Query: 323 NVRVASRYFKGPELLADYQYHIELD 347
N V + ++ PE++ Y + D
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKAD 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 10 ALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGP 67
ALDY HS +++RD+K N+M+D + +++ D+GL E G + + P
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQL-----VRIAKVLGTE 119
E+L D Y ++D W LG ++ M+ + PF++ H+ +L +R + LG E
Sbjct: 179 EVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 235
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 268 RYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVR 325
R+Y E++ ALDY HS +++RD+K N+M+D + +++ D+GL E G
Sbjct: 111 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXF 169
Query: 326 VASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKN 385
+ + PE+L D Y +D ++ F + +++ L ++ +
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI--- 226
Query: 386 ILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLT-----AREAMDHPYFYP 440
RF T + PEA L LL+ D +RL A+E M H +F
Sbjct: 227 -----------RFPRT-----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
Query: 441 IV 442
IV
Sbjct: 271 IV 272
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGPE 68
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ PE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 69 LL----ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ + + YDY D+WSLG L M EP H + L++IAK
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 160 YESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL 219
YE D +D ++++ +LG G + +V++A N ++S +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 220 ENLRGG--TNIITLQAVVKDPVSRTPALIFEHVNNTD--FKQLYQTLTDYDIRYYLYELL 275
+ L NI+ L + + F D +L + LT+ I+ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKGP 334
AL+Y H I+HRD+K N++ + ++L D+G+ A+ Q + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAP 204
Query: 335 ELL 337
E++
Sbjct: 205 EVV 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFK 65
+ Y H+ +HRD+ NV++D+ +R +++ D+GLA+ G E Y VR + ++
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEEL 121
PE L +Y+ Y Y+ D+WS G L ++ + + +L+ IA+ VL EL
Sbjct: 205 APECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263
Query: 122 FE 123
E
Sbjct: 264 LE 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+II + +D + + L+ E+V + ++ + + ++ + + Y H+
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFKGPELLADY 340
+HRD+ NV++D+ +R +++ D+GLA+ G E Y VR + ++ PE L +Y
Sbjct: 154 HYIHRDLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 341 QYHIELD 347
+++ D
Sbjct: 213 KFYYASD 219
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 2 RIATGASMALDYCHS-MGIMHRDVKPHNVMID----HENR-KLRLIDWGLAEFYHPGQEY 55
+I+ + LDY H GI+H D+KP NV+++ EN ++++ D G A +Y + Y
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHY 192
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI---FRKEPFFHGHD---NYDQL 109
+ +R ++ PE+L + D+WS C++ +I F EP GH + D +
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEP-DEGHSYTKDDDHI 250
Query: 110 VRIAKVLGTEELFEYL 125
+I ++LG EL YL
Sbjct: 251 AQIIELLG--ELPSYL 264
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 273 ELLKALDYCHS-MGIMHRDVKPHNVMID----HENR-KLRLIDWGLAEFYHPGQEYNVRV 326
+LL LDY H GI+H D+KP NV+++ EN ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSI 196
Query: 327 ASRYFKGPELL 337
+R ++ PE+L
Sbjct: 197 QTREYRSPEVL 207
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 2 RIATGASMALDYCHS-MGIMHRDVKPHNVMID----HENR-KLRLIDWGLAEFYHPGQEY 55
+I+ + LDY H GI+H D+KP NV+++ EN ++++ D G A +Y + Y
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHY 192
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI---FRKEPFFHGHD---NYDQL 109
+ +R ++ PE+L + D+WS C++ +I F EP GH + D +
Sbjct: 193 TNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEP-DEGHSYTKDDDHI 250
Query: 110 VRIAKVLGTEELFEYL 125
+I ++LG EL YL
Sbjct: 251 AQIIELLG--ELPSYL 264
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 273 ELLKALDYCHS-MGIMHRDVKPHNVMID----HENR-KLRLIDWGLAEFYHPGQEYNVRV 326
+LL LDY H GI+H D+KP NV+++ EN ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSI 196
Query: 327 ASRYFKGPELL 337
+R ++ PE+L
Sbjct: 197 QTREYRSPEVL 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ G+ + + Y
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVK-GRTWXLCGTPEY 204
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
+L+ + Y+ ++D W+LG ++ M PFF
Sbjct: 205 LAPAIILS--KGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK 189
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHEN--RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 67
AL Y HS ++H+D+KP N++ + +++ID+GLAE + + + + P
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 68 ELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
E+ + + D+WS G ++ ++ PF
Sbjct: 196 EVFK--RDVTFKCDIWSAGVVMYFLLTGCLPF 225
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/182 (18%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHEN--RKLRLIDWGLAEFYH 317
+ L++ + + +++ AL Y HS ++H+D+KP N++ + +++ID+GLAE +
Sbjct: 119 KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178
Query: 318 PGQEYNVRVASRYFKGPELLA-DYQYHIELDPRFADILGRHSRKRWERFVHTENQHLVSP 376
+ + + PE+ D + ++ W V + +
Sbjct: 179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDI---------------WSAGV---VMYFLLT 220
Query: 377 EALDFLDKNILGRHSRKRWERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHP 436
L F ++ + ++ + ++P+A+D L ++L D R +A + + H
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHE 280
Query: 437 YF 438
+F
Sbjct: 281 WF 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 2 RIATGASMALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+IA AL++ HS + ++HRDVKP NV+I+ + ++ D+G++ + ++
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKXCDFGISGYLVDDVAKDIDAG 198
Query: 61 SRYFKGPELL---ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE + + + Y D+WSLG + + P+ + QL ++ +
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHS-MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHP 318
QT+ + + ++KAL++ HS + ++HRDVKP NV+I+ + ++ D+G++ +
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQ-VKXCDFGISGYLVD 189
Query: 319 GQEYNVRVASRYFKGPE 335
++ + + PE
Sbjct: 190 DVAKDIDAGCKPYXAPE 206
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQII 247
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQII 246
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLA 178
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQII 224
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRVASRYFK 332
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 333 GPELL 337
PE++
Sbjct: 179 APEVI 183
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 18/104 (17%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
A + +Y HS+ +++RD+KP N++ID + +++ D+G A+ RV R
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK----------RVKGRT 195
Query: 64 FK---GPELLAD----YQMYDYSLDMWSLGCMLASMIFRKEPFF 100
+ PE LA + Y+ ++D W+LG ++ M PFF
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 268 RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
R+Y +++ +Y HS+ +++RD+KP N++ID + +++ D+G A+
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAK 189
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 221
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRVASRYFK 332
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++ S +
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 333 GPELL 337
PE++
Sbjct: 176 APEVI 180
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQIIEM 237
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 258 LYQTLTDYDIRYYL---YELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
L+ + T ++++ + + + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQIIEM 237
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 258 LYQTLTDYDIRYYL---YELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
L+ + T ++++ + + + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 110 LHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDFGLA 167
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 224
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRVASRYFK 332
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 333 GPELL 337
PE++
Sbjct: 179 APEVI 183
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 145 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 198
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLDKYHIELDP 134
Y D+WS+G L M + P G G+ +FE LD E P
Sbjct: 199 -YSVQSDIWSMGLSLVEMAVGRYPIGSGS-------------GSMAIFELLDYIVNEPPP 244
Query: 135 RF 136
+
Sbjct: 245 KL 246
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 158
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 159 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 204
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRVASRYFK 332
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 333 GPELL 337
PE++
Sbjct: 174 APEVI 178
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
+ Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G+ + + PE
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 196
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + + + +D+WSLGC+L +++ K PF
Sbjct: 197 VLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 226
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ +T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA +
Sbjct: 121 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFD 179
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L + E+D
Sbjct: 180 GERKKDLCGTPNYIAPEVLCKKGHSFEVD 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF---YHPGQEYNVRVASRYFK 332
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 333 GPELL 337
PE++
Sbjct: 174 APEVI 178
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
+ Y H+ ++HRD+K N+ ++ ++ +++ D+GLA + G+ + + PE
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 212
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + + + +D+WSLGC+L +++ K PF
Sbjct: 213 VLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+ +T+ + RY++ + ++ + Y H+ ++HRD+K N+ ++ ++ +++ D+GLA +
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFD 195
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
G+ + + PE+L + E+D
Sbjct: 196 GERKKDLCGTPNYIAPEVLCKKGHSFEVD 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 39/283 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLE----NLRGGT 226
DDYQL +LG+G +S V + + E L
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 227 NIITLQAVVKDPVSRTPA--LIFEHVNNTD-FKQLY--QTLTDYDIRYYLYELLKALDYC 281
NI+ L D +S L+F+ V + F+ + + ++ D + ++++L+++++
Sbjct: 91 NIVRLH----DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 282 HSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLA 338
H I+HRD+KP N+++ + + ++L D+GLA E Q + + + PE+L
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 339 DYQYHIELDPRFAD----ILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKR 394
Y +D IL W+ H Q + A DF
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ-IKAGAYDF---------PSPE 256
Query: 395 WERFVHTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPY 437
W+ V+PEA + ++++L + +R+TA +A+ HP+
Sbjct: 257 WDT---------VTPEAKNLINQMLTINPAKRITADQALKHPW 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLA-EFYHPGQEYNVRVASRYFKG 66
++++ H I+HRD+KP N+++ + + ++L D+GLA E Q + + +
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFF 100
PE+L Y +D+W+ G +L ++ PF+
Sbjct: 202 PEVLRK-DPYGKPVDIWACGVILYILLVGYPPFW 234
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFK 65
+ Y HS +HR++ NV++D+ +R +++ D+GLA+ G E Y VR + ++
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEEL 121
PE L +Y+ Y Y+ D+WS G L ++ + + +L+ IA+ VL EL
Sbjct: 188 APECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 246
Query: 122 FE 123
E
Sbjct: 247 LE 248
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+II + +D ++ L+ E+V + ++ + + ++ + + Y HS
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFKGPELLADY 340
+HR++ NV++D+ +R +++ D+GLA+ G E Y VR + ++ PE L +Y
Sbjct: 137 HYIHRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 341 QYHIELD 347
+++ D
Sbjct: 196 KFYYASD 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHP 318
+TLT+ +I L LK L+Y H M +HRD+K N++++ E +L D+G+A +
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDX 178
Query: 319 GQEYNVRVASRYFKGPELLADYQYHIELD 347
+ N + + ++ PE++ + Y+ D
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPE 68
L+Y H M +HRD+K N++++ E +L D+G+A + + N + + ++ PE
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
++ + Y+ D+WSLG M K P+ H
Sbjct: 196 VIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIH 229
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWGLAEFY 49
+IA+G + + HS+ I+HRD+KP N+++ EN ++ + D+GL +
Sbjct: 141 QIASGVA----HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 50 HPGQ-----EYNVRVASRYFKGPELL--ADYQMYDYSLDMWSLGCMLASMIFR-KEPFFH 101
GQ N + ++ PELL + + S+D++S+GC+ ++ + K PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 102 GHDNYDQLVR 111
+ ++R
Sbjct: 257 KYSRESNIIR 266
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 45/206 (21%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWG 311
+Y+ L ++ + + HS+ I+HRD+KP N+++ EN ++ + D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 312 LAEFYHPGQ-----EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV 366
L + GQ N + ++ PELL + +++R R +
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE-----------------STKRRLTRSI 234
Query: 367 HTENQ-----HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL----VSPEALDFLDK 417
+ +++S F DK R S F E + L + EA D + +
Sbjct: 235 DIFSMGCVFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQ 292
Query: 418 LLRYDHYERLTAREAMDHPYFYPIVK 443
++ +D +R TA + + HP F+P K
Sbjct: 293 MIDHDPLKRPTAMKVLRHPLFWPKSK 318
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 24/130 (18%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWGLAEFY 49
+IA+G + + HS+ I+HRD+KP N+++ EN ++ + D+GL +
Sbjct: 141 QIASGVA----HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 50 HPGQ-----EYNVRVASRYFKGPELL--ADYQMYDYSLDMWSLGCMLASMIFR-KEPFFH 101
GQ N + ++ PELL + + S+D++S+GC+ ++ + K PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 102 GHDNYDQLVR 111
+ ++R
Sbjct: 257 KYSRESNIIR 266
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 45/206 (21%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWG 311
+Y+ L ++ + + HS+ I+HRD+KP N+++ EN ++ + D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 312 LAEFYHPGQ-----EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV 366
L + GQ N + ++ PELL + +++R R +
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE-----------------STKRRLTRSI 234
Query: 367 HTENQ-----HLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL----VSPEALDFLDK 417
+ +++S F DK R S F E + L + EA D + +
Sbjct: 235 DIFSMGCVFYYILSKGKHPFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQ 292
Query: 418 LLRYDHYERLTAREAMDHPYFYPIVK 443
++ +D +R TA + + HP F+P K
Sbjct: 293 MIDHDPLKRPTAMKVLRHPLFWPKSK 318
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 132/349 (37%), Gaps = 115/349 (32%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNIITLQ 232
Y++V LG G + +V E I+ ++ GG ++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKA----------------------------GGRHVAV-- 45
Query: 233 AVVKD-----PVSRTPALIFEHVNNTDFKQLYQT---------------------LTDYD 266
+VK+ +R+ + EH+N TD ++ L+ YD
Sbjct: 46 KIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD 105
Query: 267 --------------IRYYLYELLKALDYCHSMGIMHRDVKPHNVM-------------ID 299
IR Y++ K++++ HS + H D+KP N++ I
Sbjct: 106 FIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165
Query: 300 HENRKL-----RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDP-RFADI 353
+ R L +++D+G A + + ++ V R+++ PE++ + D I
Sbjct: 166 RDERTLINPDIKVVDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCI 223
Query: 354 LGRHSRKRWERFVHTENQHLVSPE-ALDFLDKNILGR--------HSRKRWE------RF 398
L + H +HL E L L K+++ + H R W+ R+
Sbjct: 224 LIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRY 283
Query: 399 VHTENQHL--------VSPEAL-DFLDKLLRYDHYERLTAREAMDHPYF 438
V + L V E L D + K+L YD +R+T REA+ HP+F
Sbjct: 284 VSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVM-------------IDHENRKL-----RLIDW 43
++A ++++ HS + H D+KP N++ I + R L +++D+
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 44 GLAEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 103
G A + + ++ V R+++ PE++ + D+WS+GC+L + F H
Sbjct: 182 GSATY--DDEHHSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEY-YLGFTVFPTH 237
Query: 104 DNYDQLVRIAKVLG 117
D+ + L + ++LG
Sbjct: 238 DSKEHLAMMERILG 251
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 239
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLA 171
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P+ + +N DQ++
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN-INNRDQII 247
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLA 179
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKG 66
+ +DY HS ++HRD+KP N+ + + +++++ D+GL + G+ + RY
Sbjct: 146 TKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYM-S 203
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMI------FRKEPFF 100
PE ++ Q Y +D+++LG +LA ++ F FF
Sbjct: 204 PEQISS-QDYGKEVDLYALGLILAELLHVCDTAFETSKFF 242
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYF 331
++ K +DY HS ++HRD+KP N+ + + +++++ D+GL + G+ + RY
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYM 202
Query: 332 KGPELLADYQYHIELD 347
PE ++ Y E+D
Sbjct: 203 -SPEQISSQDYGKEVD 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVRV 59
IA + +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA + ++
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 60 ASRYFKGPEL--LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
S + PE+ + D Y + D+++ G +L ++ + P + +N DQ++
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +DY H+ I+HRD+K +N+ + HE+ +++ D+GLA
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLA 151
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 18 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL----ADY 73
G++HRDVKP N+++D E +++L D+G++ + + + PE +
Sbjct: 145 GVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 74 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 112
YD D+WSLG L + + P+ + +++ L ++
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 274 LLKALDYCHSM-GIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
++KAL Y G++HRDVKP N+++D E +++L D+G++
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLD-ERGQIKLCDFGIS 172
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 19/108 (17%)
Query: 4 ATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA-----EFYHP------- 51
A + + Y HSM I+HRD+ HN ++ EN+ + + D+GLA E P
Sbjct: 114 AKDIASGMAYLHSMNIIHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 52 ----GQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFR 95
+ Y V V + Y+ PE++ + + YD +D++S G +L +I R
Sbjct: 173 KPDRKKRYTV-VGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGR 218
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
+ ++ + Y HSM I+HRD+ HN ++ EN+ + + D+GLA
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLV-RENKNVVVADFGLARL 157
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFK 65
+ Y H+ +HR++ NV++D+ +R +++ D+GLA+ G E Y VR + ++
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK----VLGTEEL 121
PE L +Y+ Y Y+ D+WS G L ++ + + +L+ IA+ VL EL
Sbjct: 188 APECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 246
Query: 122 FE 123
E
Sbjct: 247 LE 248
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+II + +D ++ L+ E+V + ++ + + ++ + + Y H+
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFKGPELLADY 340
+HR++ NV++D+ +R +++ D+GLA+ G E Y VR + ++ PE L +Y
Sbjct: 137 HYIHRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 341 QYHIELD 347
+++ D
Sbjct: 196 KFYYASD 202
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHS 283
NI+ + V+ P A++ E+ + + F+++ ++ + R++ +L+ + YCH+
Sbjct: 76 NIVRFKEVILTPTHL--AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 284 MGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
M + HRD+K N ++D +L++ +G ++ + V + + PE+L +Y
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 343 HIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTE 402
D + AD+ W V +++ A F D ++ RK R ++ +
Sbjct: 194 ----DGKVADV--------WSCGV---TLYVMLVGAYPFEDPE-EPKNFRKTIHRILNVQ 237
Query: 403 ----NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +SPE + ++ D +R++ E +H +F
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ YCH+M + HRD+K N ++D +L++ +G ++ + V + + PE
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + D+WS G L M+ PF
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA--EFYHPGQEYNVRVASRYFKGP 67
AL+Y H I+HRD+K N++ + ++L D+G++ Q + + + Y+ P
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 68 ELL----ADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
E++ + + YDY D+WSLG L M EP H + L++IAK
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 228
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 257 QLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA--E 314
+L + LT+ I+ + L AL+Y H I+HRD+K N++ + ++L D+G++
Sbjct: 100 ELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKN 158
Query: 315 FYHPGQEYNVRVASRYFKGPELL 337
Q + + + Y+ PE++
Sbjct: 159 TRTXIQRRDSFIGTPYWMAPEVV 181
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWGLAEFY 49
+IA+G + + HS+ I+HRD+KP N+++ EN ++ + D+GL +
Sbjct: 123 QIASGVA----HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 50 HPGQE-----YNVRVASRYFKGPELLADYQMYDY------SLDMWSLGCMLASMIFR-KE 97
GQ N + ++ PELL + S+D++S+GC+ ++ + K
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 98 PFFHGHDNYDQLVR 111
PF + ++R
Sbjct: 239 PFGDKYSRESNIIR 252
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWG 311
+Y+ L ++ + + HS+ I+HRD+KP N+++ EN ++ + D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 312 LAEFYHPGQE-----YNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV 366
L + GQ N + ++ PELL + +++ R + S ++
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESN-NLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 367 HTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL----VSPEALDFLDKLLRYD 422
++ +H F DK R S F E + L + EA D + +++ +D
Sbjct: 233 LSKGKH-------PFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283
Query: 423 HYERLTAREAMDHPYFYPIVK 443
+R TA + + HP F+P K
Sbjct: 284 PLKRPTAMKVLRHPLFWPKSK 304
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 28/134 (20%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWGLAEFY 49
+IA+G + + HS+ I+HRD+KP N+++ EN ++ + D+GL +
Sbjct: 123 QIASGVA----HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 50 HPGQ-----EYNVRVASRYFKGPELLADYQMYDY------SLDMWSLGCMLASMIFR-KE 97
GQ N + ++ PELL + S+D++S+GC+ ++ + K
Sbjct: 179 DSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 98 PFFHGHDNYDQLVR 111
PF + ++R
Sbjct: 239 PFGDKYSRESNIIR 252
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 31/201 (15%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID------------HENRKLRLIDWG 311
+Y+ L ++ + + HS+ I+HRD+KP N+++ EN ++ + D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 312 LAEFYHPGQ-----EYNVRVASRYFKGPELLADYQYHIELDPRFADILGRHSRKRWERFV 366
L + GQ N + ++ PELL + +++ R + S ++
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESN-NLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 367 HTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHL----VSPEALDFLDKLLRYD 422
++ +H F DK R S F E + L + EA D + +++ +D
Sbjct: 233 LSKGKH-------PFGDK--YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283
Query: 423 HYERLTAREAMDHPYFYPIVK 443
+R TA + + HP F+P K
Sbjct: 284 PLKRPTAMKVLRHPLFWPKSK 304
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+AL + HS G++H DVKP N+ + R +L D+GL V+ + PE
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
LL Y + D++SLG + + E HG + + QL
Sbjct: 227 LLQGS--YGTAADVFSLGLTILEVACNME-LPHGGEGWQQL 264
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
+L + + YL + L AL + HS G++H DVKP N+ + R +L D+GL
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVELGTAG 211
Query: 321 EYNVRVASRYFKGPELL 337
V+ + PELL
Sbjct: 212 AGEVQEGDPRYMAPELL 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHS 283
NI+ + V+ P A++ E+ + + F+++ ++ + R++ +L+ + YCH+
Sbjct: 76 NIVRFKEVILTPTHL--AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 284 MGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
M + HRD+K N ++D +L++ +G ++ + V + + PE+L +Y
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 343 HIELDPRFADILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTE 402
D + AD+ W V +++ A F D ++ RK R ++ +
Sbjct: 194 ----DGKVADV--------WSCGV---TLYVMLVGAYPFEDPE-EPKNFRKTIHRILNVQ 237
Query: 403 ----NQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYF 438
+ +SPE + ++ D +R++ E +H +F
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ YCH+M + HRD+K N ++D +L++ +G ++ + V + + PE
Sbjct: 127 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + D+WS G L M+ PF
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLEN----LRG 224
Q+DD+++++ +GRG +SEV Q+ E + G
Sbjct: 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG 118
Query: 225 GTNIIT-LQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYD----IRYYLYELLKALD 279
IT L +D L+ E+ D L + R+YL E++ A+D
Sbjct: 119 DRRWITQLHFAFQD--ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAID 176
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG 311
H +G +HRD+KP N+++D +RL D+G
Sbjct: 177 SVHRLGYVHRDIKPDNILLDRCGH-IRLADFG 207
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 9 MALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG-LAEFYHPGQEYN-VRVASRYFKG 66
MA+D H +G +HRD+KP N+++D +RL D+G + G + V V + +
Sbjct: 173 MAIDSVHRLGYVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLS 231
Query: 67 PELLADYQMYDY------SLDMWSLGCMLASMIFRKEPFF 100
PE+L D W+LG M + + PF+
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 188 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 241
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 242 -YSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 201
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 202 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 247
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMID----HENRKLRLIDWGLAEFYHPGQ-EYNVRVAS 61
+ L + HS+ I+HRD+KPHN++I H K + D+GL + G+ ++ R
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 62 RYFKG---PELLAD--YQMYDYSLDMWSLGCML 89
+G PE+L++ + Y++D++S GC+
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 239 VSRTPALIFEHVNNTDFKQL-YQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+ A + E+V DF L + +T L + L + HS+ I+HRD+KPHN++
Sbjct: 97 IELCAATLQEYVEQKDFAHLGLEPIT------LLQQTTSGLAHLHSLNIVHRDLKPHNIL 150
Query: 298 ID----HENRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKG---PELLADYQYHIELDPR 349
I H K + D+GL + G+ ++ R +G PE+L++ + +P
Sbjct: 151 ISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE---DCKENPT 207
Query: 350 FA-DILGRHSRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFVHTENQHLVS 408
+ DI S +V +E H ++L +LG S +H E V
Sbjct: 208 YTVDIF---SAGCVFYYVISEGSHPFG-KSLQRQANILLGACSLD----CLHPEKHEDVI 259
Query: 409 PEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVK 443
A + ++K++ D +R +A+ + HP+F+ + K
Sbjct: 260 --ARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYFKG 66
+ +DY HS +++RD+KP N+ + + +++++ D+GL + G+ + RY
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM-S 189
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMI------FRKEPFF 100
PE ++ Q Y +D+++LG +LA ++ F FF
Sbjct: 190 PEQISS-QDYGKEVDLYALGLILAELLHVCDTAFETSKFF 228
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL-AEFYHPGQEYNVRVASRYF 331
++ K +DY HS +++RD+KP N+ + + +++++ D+GL + G+ + RY
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 332 KGPELLADYQYHIELD 347
PE ++ Y E+D
Sbjct: 189 -SPEQISSQDYGKEVD 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 153 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 206
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 207 -YSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 166
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 167 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 139
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 140 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 139
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 140 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 139
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 140 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQT--LTDYDIRYYLYELLKALDYCHS 283
NI+ + V+ P A++ E+ + + F+++ ++ + R++ +L+ + Y H+
Sbjct: 76 NIVRFKEVILTPTHL--AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 284 MGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
M + HRD+K N ++D +L++ D+G ++ + V + + PE+L +Y
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 343 HIELDPRFADI 353
D + AD+
Sbjct: 194 ----DGKVADV 200
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 68
+ Y H+M + HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 127 GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPE 186
Query: 69 LLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+L + D+WS G L M+ PF
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 139
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 140 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 179
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L M + P
Sbjct: 180 -YSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 139
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 140 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y HS I+H DVK NV++ + L D+G A P + Y G
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEP---FFHG 102
PE++ + D +D+WS CM+ M+ P FF G
Sbjct: 257 HMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Query: 245 LIFEHVNNTDFKQLYQ---TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E + QL + L + YYL + L+ L+Y HS I+H DVK NV++ +
Sbjct: 162 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
L D+G A P + Y G E
Sbjct: 222 GSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTE 255
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 11/85 (12%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 136 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGTH 189
Query: 75 MYDYSLDMWSLGCMLASMIFRKEPF 99
Y D+WS+G L + + P
Sbjct: 190 -YSVQSDIWSMGLSLVELAVGRYPI 213
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + +L+ L Y IMHRDVKP N++++
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN 149
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 150 SRG-EIKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSD 195
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQ 74
IMHRDVKP N++++ +++L D+G++ GQ N V +R + PE L
Sbjct: 129 IMHRDVKPSNILVNSRG-EIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGTH 182
Query: 75 MYDYSLDMWSLGCMLASMIFRKEP 98
Y D+WS+G L M + P
Sbjct: 183 -YSVQSDIWSMGLSLVEMAVGRYP 205
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 244 ALIFEHVNNTDFKQLYQT---LTDYDIRYYLYELLKALDYCHSM-GIMHRDVKPHNVMID 299
++ EH++ Q+ + + + + ++K L Y IMHRDVKP N++++
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 142
Query: 300 HENRKLRLIDWGLAEFYHPGQ----EYNVRVASRYFKGPELLADYQYHIELD 347
+++L D+G++ GQ N V +R + PE L Y ++ D
Sbjct: 143 SRG-EIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSD 188
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y HS I+H DVK NV++ + L D+G A P + Y G
Sbjct: 178 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEP---FFHG 102
PE++ + D +D+WS CM+ M+ P FF G
Sbjct: 238 HMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 245 LIFEHVNNTDFKQLYQ---TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E + QL + L + YYL + L+ L+Y HS I+H DVK NV++ +
Sbjct: 143 IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 302 NRKLRLIDWGLAEFYHP 318
L D+G A P
Sbjct: 203 GSHAALCDFGHAVCLQP 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 4 ATGASMALDYCHS---MGIMHRDVKPHNVMI-------DHENRKLRLIDWGLAEFYHPGQ 53
A + ++Y H + I+HRD+K N++I D N+ L++ D+GLA +H +
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--R 168
Query: 54 EYNVRVASRY-FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+ A Y + PE++ M+ D+WS G +L ++ + PF
Sbjct: 169 TTKMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPF 214
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 270 YLYELLKALDYCHS---MGIMHRDVKPHNVMI-------DHENRKLRLIDWGLAEFYHPG 319
+ ++ + ++Y H + I+HRD+K N++I D N+ L++ D+GLA +H
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-- 167
Query: 320 QEYNVRVASRY-FKGPELL 337
+ + A Y + PE++
Sbjct: 168 RTTKMSAAGAYAWMAPEVI 186
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y H+ I+H DVK NV++ + + L D+G A P + Y G
Sbjct: 178 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 237
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE++ + D +D+WS CM+ M+ P+
Sbjct: 238 HMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 272
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 245 LIFEHVNNTDFKQLYQ---TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E + QL + L + YYL + L+ L+Y H+ I+H DVK NV++ +
Sbjct: 143 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 202
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
+ L D+G A P + Y G E
Sbjct: 203 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 69
AL YCH ++HRD+KP N++ +L++ D+G + + P + + PE+
Sbjct: 135 ALMYCHGKKVIHRDIKPENLL-LGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEM 192
Query: 70 LADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRI 112
+ + +M++ +D+W +G + ++ PF N Y ++V++
Sbjct: 193 I-EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 111/295 (37%), Gaps = 41/295 (13%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGT---- 226
DD+++ R LG+GK+ V+ A +S +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 227 -NIITLQAVVKDPVSRTPALIFEHVNNTD-FKQLYQTLT--DYDIRYYLYELLKALDYCH 282
NI+ L D R LI E+ + +K+L ++ T + + EL AL YCH
Sbjct: 83 PNILRLYNYFYD--RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQY 342
++HRD+KP N++ +L++ D+G + + P + + PE++ +
Sbjct: 141 GKKVIHRDIKPENLL-LGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 343 HIELDPRFADILGRH---SRKRWERFVHTENQHLVSPEALDFLDKNILGRHSRKRWERFV 399
+ ++D +L +E H E + L F G
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTG----------- 247
Query: 400 HTENQHLVSPEALDFLDKLLRYDHYERLTAREAMDHPYFYPIVKDQSRHTLPSSS 454
A D + KLLR++ ERL + HP+ V+ SR LP S+
Sbjct: 248 -----------AQDLISKLLRHNPSERLPLAQVSAHPW----VRANSRRVLPPSA 287
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y H+ I+H DVK NV++ + + L D+G A P + Y G
Sbjct: 162 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 221
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE++ + D +D+WS CM+ M+ P+
Sbjct: 222 HMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 256
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 245 LIFEHVNNTDFKQLYQ---TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E + QL + L + YYL + L+ L+Y H+ I+H DVK NV++ +
Sbjct: 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 186
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
+ L D+G A P + Y G E
Sbjct: 187 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 342
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 343 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 346 KWTAPEAALYGRFTIKSD 363
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG--- 66
L+Y H+ I+H DVK NV++ + + L D+G A P + Y G
Sbjct: 176 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 67 ---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
PE++ + D +D+WS CM+ M+ P+
Sbjct: 236 HMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 270
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 245 LIFEHVNNTDFKQLYQ---TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHE 301
+ E + QL + L + YYL + L+ L+Y H+ I+H DVK NV++ +
Sbjct: 141 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 200
Query: 302 NRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
+ L D+G A P + Y G E
Sbjct: 201 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 234
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 342
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 343 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 346 KWTAPEAALYGRFTIKSD 363
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 342
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 343 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 346 KWTAPEAALYGRFTIKSD 363
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 16/99 (16%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEF--YHPG-----------QEYNVRVASRYFK 65
I+HRD+K N+++ ++ ++L D+G A ++P +E R + ++
Sbjct: 159 IIHRDLKVENLLLSNQG-TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYR 217
Query: 66 GPELLADYQMYDYS--LDMWSLGCMLASMIFRKEPFFHG 102
PE++ Y + D+W+LGC+L + FR+ PF G
Sbjct: 218 TPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 186
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 187 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 215
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 24 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 83
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 144 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 342 YHIELD 347
+ I+ D
Sbjct: 202 FSIKSD 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHVVKVADFGLSRL-MTGDTYTAHAGAK 192
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 193 FPIKWTAPESLA-YNTFSIKSDVWAFGVLL 221
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ +T + Y ++ A++Y +HRD+ N ++ EN +++ D+GL+ G
Sbjct: 125 EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHVVKVADFGLSRL-MTG 182
Query: 320 QEYNVRVASRY---FKGPELLADYQYHIELD 347
Y +++ + PE LA + I+ D
Sbjct: 183 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 425
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 426 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 428
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 429 KWTAPEAALYGRFTIKSD 446
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 178
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 179 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 207
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 342 YHIELD 347
+ I+ D
Sbjct: 194 FSIKSD 199
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 178
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 179 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 207
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXX--XXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 342 YHIELD 347
+ I+ D
Sbjct: 194 FSIKSD 199
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAK 175
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 176 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 204
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 133 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 342 YHIELD 347
+ I+ D
Sbjct: 191 FSIKSD 196
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 178
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 179 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 207
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 342 YHIELD 347
+ I+ D
Sbjct: 194 FSIKSD 199
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 169
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 170 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 172
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 173 KWTAPEAALYGRFTIKSD 190
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 175
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 176 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 204
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 133 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 342 YHIELD 347
+ I+ D
Sbjct: 191 FSIKSD 196
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 178
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 179 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 207
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 342 YHIELD 347
+ I+ D
Sbjct: 194 FSIKSD 199
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 173
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 174 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 202
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 342 YHIELD 347
+ I+ D
Sbjct: 189 FSIKSD 194
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 167
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 168 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 170
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 171 KWTAPEAALYGRFTIKSD 188
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAK 177
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 178 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 206
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 74
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 135 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 342 YHIELD 347
+ I+ D
Sbjct: 193 FSIKSD 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 61
+IA+G + Y M +HRD++ N+++ EN ++ D+GLA EY R +
Sbjct: 119 QIASG----MAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGA 172
Query: 62 RY---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 173 KFPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 176
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 177 KWTAPEAALYGRFTIKSD 194
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 108 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 165
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 166 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 168
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 169 KWTAPEAALYGRFTIKSD 186
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAPAGAK 174
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 175 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 203
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 132 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 342 YHIELD 347
+ I+ D
Sbjct: 190 FSIKSD 195
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G Y ++
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAPAGAK 175
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 176 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 204
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 133 NFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 342 YHIELD 347
+ I+ D
Sbjct: 191 FSIKSD 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFK 65
+ Y H+ +HR + NV++D+ +R +++ D+GLA+ G E Y VR + ++
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
PE L + + Y Y+ D+WS G L ++ + H + +L+
Sbjct: 182 APECLKECKFY-YASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 225
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+I+ + +D ++ L+ E+V + + + + ++ + + Y H+
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFKGPELLADY 340
+HR + NV++D+ +R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 131 HYIHRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 341 QYHIELD 347
+++ D
Sbjct: 190 KFYYASD 196
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFK 65
+ Y H+ +HR + NV++D+ +R +++ D+GLA+ G E Y VR + ++
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
PE L + + Y Y+ D+WS G L ++ + H + +L+
Sbjct: 183 APECLKECKFY-YASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 226
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+I+ + +D ++ L+ E+V + + + + ++ + + Y H+
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRV---ASRYFKGPELLADY 340
+HR + NV++D+ +R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 132 HYIHRALAARNVLLDN-DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 341 QYHIELD 347
+++ D
Sbjct: 191 KFYYASD 197
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HR++ N ++ EN +++ D+GL+ G Y ++
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAK 380
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 381 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 409
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXX--XXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HR++ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 338 NFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 342 YHIELD 347
+ I+ D
Sbjct: 396 FSIKSD 401
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HR++ N ++ EN +++ D+GL+ G Y ++
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAK 419
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 420 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 448
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXX--XXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 257 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 316
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HR++ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 377 NFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 342 YHIELD 347
+ I+ D
Sbjct: 435 FSIKSD 440
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HR++ N ++ EN +++ D+GL+ G Y ++
Sbjct: 320 MATQISSAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAK 377
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 378 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 406
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXX--XXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 215 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 274
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HR++ N ++ EN +++ D+GL+ G Y +++ + PE LA +
Sbjct: 335 NFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 342 YHIELD 347
+ I+ D
Sbjct: 393 FSIKSD 398
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ G + ++
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTFTAHAGAK 171
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCML 89
+ + PE LA Y + D+W+ G +L
Sbjct: 172 FPIKWTAPESLA-YNKFSIKSDVWAFGVLL 200
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 75/186 (40%), Gaps = 9/186 (4%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQ 341
+HRD+ N ++ EN +++ D+GL+ G + +++ + PE LA +
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 342 YHIELD 347
+ I+ D
Sbjct: 187 FSIKSD 192
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GL EY R ++
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGRLIE-DNEYTARQGAK 343
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 344 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GL EY R +++
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGRLIE-DNEYTARQGAKFPI 346
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 347 KWTAPEAALYGRFTIKSD 364
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD+ N+++ EN ++ D+GLA EY R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD+ N+++ EN ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 560 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRY 540
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 3 IATGASMA--LDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
I+ G +A ++Y +HRD+ N M+D E+ +++ D+GLA E+Y Q
Sbjct: 127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQH 185
Query: 55 YNVRVASRYFKGPELLADYQMYDYSL--DMWSLGCMLASMIFRKEPFFHGHDNYD 107
+ R+ ++ L Q Y ++ D+WS G +L ++ R P + D +D
Sbjct: 186 RHARLPVKWTA----LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD 236
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTL----TDYDIRYYLYELLKALDYCH 282
N++ L ++ P P ++ ++ + D Q ++ T D+ + ++ + ++Y
Sbjct: 83 NVLALIGIMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRYFKGPEL 336
+HRD+ N M+D E+ +++ D+GLA E+Y Q + R+ ++ E
Sbjct: 142 EQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW-TALES 199
Query: 337 LADYQYHIELD 347
L Y++ + D
Sbjct: 200 LQTYRFTTKSD 210
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 1 MRIATGASMALDYCHSM---GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV 57
M S + Y HSM ++HRD+KP N+++ L++ D+G A N
Sbjct: 106 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN- 164
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
S + PE+ + Y D++S G +L +I R++PF
Sbjct: 165 -KGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPF 204
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTL---------TDYDIRYYLYELLKA 277
NI+ L +PV L+ E+ LY L T + + +
Sbjct: 63 NIVKLYGACLNPV----CLVMEYAEGGS---LYNVLHGAEPLPYYTAAHAMSWCLQCSQG 115
Query: 278 LDYCHSM---GIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ Y HSM ++HRD+KP N+++ L++ D+G A
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 1 MRIATGASMALDYCHSM---GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV 57
M S + Y HSM ++HRD+KP N+++ L++ D+G A N
Sbjct: 105 MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN- 163
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
S + PE+ + Y D++S G +L +I R++PF
Sbjct: 164 -KGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPF 203
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 19/99 (19%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTL---------TDYDIRYYLYELLKA 277
NI+ L +PV L+ E+ LY L T + + +
Sbjct: 62 NIVKLYGACLNPV----CLVMEYAEGGS---LYNVLHGAEPLPYYTAAHAMSWCLQCSQG 114
Query: 278 LDYCHSM---GIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ Y HSM ++HRD+KP N+++ L++ D+G A
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 61
+IA+G + Y M +HRD++ N+++ EN ++ D+GLA E+ R +
Sbjct: 119 QIASG----MAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEWTARQGA 172
Query: 62 RY---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
++ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 173 KFPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA E+ R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEWTARQGAKFPI 176
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 177 KWTAPEAALYGRFTIKSD 194
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 20/158 (12%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL-ENLRGGTNII 229
+ ++L RK+G G + E++ N+Q+++ + L+GGT I
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 230 TLQ---------AVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDY 280
++ +V D + + +F + + L D +++ +++
Sbjct: 67 NVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLAD--------QMINRVEF 118
Query: 281 CHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFY 316
HS +HRD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 11 LDYCHSMGIMHRDVKPHNVMIDHENR--KLRLIDWGLAEFY 49
+++ HS +HRD+KP N ++ R ++ +ID+GLA+ Y
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 182
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 183 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRY 163
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 181
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 182 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 118 YAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRY 162
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 11/95 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ I GA+ L Y H+ I+HRDVK N+++D EN ++ D+G+++ G E +
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK---KGTELDQTHL 197
Query: 61 SRYFKG------PELLADYQMYDYSLDMWSLGCML 89
KG PE ++ + S D++S G +L
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVL 231
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 335
+ L Y H+ I+HRDVK N+++D EN ++ D+G+++ G E + KG
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK---KGTELDQTHLXXVVKGTL 205
Query: 336 LLADYQYHIE 345
D +Y I+
Sbjct: 206 GYIDPEYFIK 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEY 55
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ H G ++
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
++ + PE LA Y + D+W+ G +L
Sbjct: 173 PIK-----WTAPESLA-YNKFSIKSDVWAFGVLL 200
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY--- 316
Q ++ + Y ++ A++Y +HRD+ N ++ EN +++ D+GL+
Sbjct: 104 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGD 162
Query: 317 ----HPGQEYNVRVASRYFKGPELLADYQYHIELD 347
H G ++ ++ + PE LA ++ I+ D
Sbjct: 163 TXTAHAGAKFPIK-----WTAPESLAYNKFSIKSD 192
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ + ++ D+GLA E R ++
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGN-GLICKIADFGLARLIE-DNEXTARQGAK 167
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L ++ + + G +N + L ++ +
Sbjct: 168 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 177 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 113 YAYQLSTALAYLESKRFVHRDIAARNVLVSS-NDCVKLGDFGLSRY 157
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +R+ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMRIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +R+ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMRIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 185 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 121 YAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY 165
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 208 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 144 YAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY 188
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEY 55
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ H G ++
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
++ + PE LA Y + D+W+ G +L
Sbjct: 176 PIK-----WTAPESLA-YNKFSIKSDVWAFGVLL 203
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 17/190 (8%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEYNVRVASRYFKGPELL 337
+HRD+ N ++ EN +++ D+GL+ H G ++ ++ + PE L
Sbjct: 132 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTAPESL 185
Query: 338 ADYQYHIELD 347
A ++ I+ D
Sbjct: 186 AYNKFSIKSD 195
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY 160
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + Y K
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY 160
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ I GA+ L Y H+ I+HRDVK N+++D EN ++ D+G+++ G E
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK---KGTELGQTHL 197
Query: 61 SRYFKG------PELLADYQMYDYSLDMWSLGCML 89
KG PE ++ + S D++S G +L
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVL 231
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 276 KALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE 314
+ L Y H+ I+HRDVK N+++D EN ++ D+G+++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK 187
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEY 55
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ H G ++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
++ + PE LA Y + D+W+ G +L
Sbjct: 180 PIK-----WTAPESLA-YNKFSIKSDVWAFGVLL 207
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 75/190 (39%), Gaps = 17/190 (8%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q + + Y ++ A++Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEYNVRVASRYFKGPELL 337
+HRD+ N ++ EN +++ D+GL+ H G ++ ++ + PE L
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTAPESL 189
Query: 338 ADYQYHIELD 347
A ++ I+ D
Sbjct: 190 AYNKFSIKSD 199
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEF 315
+T T + +LL ++Y HS +++RDVKP N +I + K + +ID+GLA+
Sbjct: 92 RTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKE 151
Query: 316 Y 316
Y
Sbjct: 152 Y 152
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
+ IA ++Y HS +++RDVKP N +I + K + +ID+GLA+ Y
Sbjct: 100 LMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEY 152
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEY 55
+AT S A++Y +HRD+ N ++ EN +++ D+GL+ H G ++
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKF 172
Query: 56 NVRVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
++ + PE LA Y + D+W+ G +L
Sbjct: 173 PIK-----WTAPESLA-YNKFSIKSDVWAFGVLL 200
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 76/190 (40%), Gaps = 17/190 (8%)
Query: 169 QQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXX--XXXXXXXXXXXXXLENLRGGT 226
++ D + KLG G+Y EV+E + + S ++ ++
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLY--QTLTDYDIRYYLYELLKALDYCHSM 284
+ L ++P + N D+ + Q ++ + Y ++ A++Y
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 285 GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY-------HPGQEYNVRVASRYFKGPELL 337
+HRD+ N ++ EN +++ D+GL+ H G ++ ++ + PE L
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTAPESL 182
Query: 338 ADYQYHIELD 347
A ++ I+ D
Sbjct: 183 AYNKFSIKSD 192
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 15/98 (15%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-------------YN 56
A+++ HS G+MHRD+KP N+ ++ +++ D+GL +E +
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIF 94
+V ++ + PE + Y + +D++SLG +L +++
Sbjct: 189 GQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY 225
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
++ +A+++ HS G+MHRD+KP N+ ++ +++ D+GL
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLV 165
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GLA P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GLA P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 215 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 271
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 272 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 316
Query: 124 YLDKYH 129
L + H
Sbjct: 317 LLKEGH 322
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 256
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 257 DYYK--KTTNGRLPVKWM-APEALFDRVY 282
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH----PGQEYNVRVASRYFK 65
++Y S +HRD+ NV++ +N +++ D+GLA H + N R+ ++
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDXXKKTTNGRLPVKWM- 219
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYL 125
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 220 APEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLL 265
Query: 126 DKYH 129
+ H
Sbjct: 266 KEGH 269
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH-- 317
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 318 --PGQEYNVRVASRYFKGPELLADYQY 342
+ N R+ ++ PE L D Y
Sbjct: 204 DXXKKTTNGRLPVKWM-APEALFDRIY 229
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA E R ++
Sbjct: 109 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEXTARQGAK 166
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 167 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA E R +++
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEXTARQGAKFPI 169
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 170 KWTAPEAALYGRFTIKSD 187
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGFVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV------------ 57
A+++ HS G+MHRD+KP N+ ++ +++ D+GL +E
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHX 234
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIF 94
+V ++ + PE + Y + +D++SLG +L +++
Sbjct: 235 GQVGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLY 271
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
++ +A+++ HS G+MHRD+KP N+ ++ +++ D+GL
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLV 211
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ + ++L D+GL+ + Y K
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 560 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ + ++L D+GL+ +
Sbjct: 496 YAYQLSTALAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRY 540
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E + N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGAVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
LT D+ + Y++ K +++ +HRD+ NV++ H + +++ D+GLA
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDS 226
Query: 321 EYNVRVASRY---FKGPELLADYQYHIELD 347
Y VR +R + PE L + Y I+ D
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ A + +++ +HRD+ NV++ H + +++ D+GLA Y VR
Sbjct: 175 LCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE L + +Y D+WS G +L
Sbjct: 234 ARLPVKWMAPESLFE-GIYTIKSDVWSYGILL 264
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 151 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 209
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 210 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 255
Query: 127 KYH 129
+ H
Sbjct: 256 EGH 258
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 192
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIY 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 62
+A + + Y M +HRD++ N+++ EN ++ D+GLA E R ++
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEXTARQGAK 176
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 114
+ + PE A Y + D+WS G +L + + + G N + L ++ +
Sbjct: 177 FPIKWTAPE-AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ + Y M +HRD++ N+++ EN ++ D+GLA E R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEXTARQGAKFPI 179
Query: 331 -FKGPELLADYQYHIELD 347
+ PE ++ I+ D
Sbjct: 180 KWTAPEAALYGRFTIKSD 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 155 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 213
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 214 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 259
Query: 127 KYH 129
+ H
Sbjct: 260 EGH 262
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 196
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIY 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 221 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 266
Query: 127 KYH 129
+ H
Sbjct: 267 EGH 269
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 154 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 212
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 213 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 258
Query: 127 KYH 129
+ H
Sbjct: 259 EGH 261
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 195
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIY 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
S + Y M ++HRD+ N+++ E RK+++ D+GL+ + Y R R +
Sbjct: 160 SQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKW 218
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMI 93
E L D+ +Y D+WS G +L ++
Sbjct: 219 MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ LT D+ + +++ + + Y M ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEE 203
Query: 320 QEYNVRVASR 329
Y R R
Sbjct: 204 DSYVKRSQGR 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 156 GMEYLASQKCIHRDLTARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 212
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 213 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 257
Query: 124 YLDKYH 129
L + H
Sbjct: 258 LLKEGH 263
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV-TENNVMKIADFGLARDINNI 197
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 198 DYYK--KTTNGRLPVKWM-APEALFDRVY 223
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 221 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 266
Query: 127 KYH 129
+ H
Sbjct: 267 EGH 269
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 147 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 205
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 206 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 251
Query: 127 KYH 129
+ H
Sbjct: 252 EGH 254
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 188
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIY 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 161 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 217
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 218 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 262
Query: 124 YLDKYH 129
L + H
Sbjct: 263 LLKEGH 268
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 202
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 203 DYYK--KTTNGRLPVKWM-APEALFDRVY 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 158 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 214
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 215 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 259
Query: 124 YLDKYH 129
L + H
Sbjct: 260 LLKEGH 265
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 199
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 200 DYYK--KTTNGRLPVKWM-APEALFDRVY 225
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 203 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 261
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 262 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPGVP-------VEELFKLLK 307
Query: 127 KYH 129
+ H
Sbjct: 308 EGH 310
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 244
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIY 270
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNI 210
Query: 314 EFYHPGQEYNVRVASRYFKGPELLADYQY 342
++Y + N R+ ++ PE L D Y
Sbjct: 211 DYYK--KTTNGRLPVKWM-APEALFDRVY 236
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 244 ALIFE----HVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHS-MGIMHRDVKPHNVMI 298
++FE H+ K YQ L ++ + ++L+ LDY HS I+H D+KP N+++
Sbjct: 115 CMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
Query: 299 DHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQYHIELDPRFAD 352
++ +R + E+ G A +LL + LDPR AD
Sbjct: 175 CVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVN-----PLDPRNAD 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E + N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 212 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 105 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 160 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
++Y S +HRD+ NV++ +N +++ D+GLA H Y R +
Sbjct: 162 GMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA 220
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYLD 126
PE L D ++Y + D+WS G +L E F G Y + EELF+ L
Sbjct: 221 PEALFD-RIYTHQSDVWSFGVLLW------EIFTLGGSPYPG-------VPVEELFKLLK 266
Query: 127 KYH 129
+ H
Sbjct: 267 EGH 269
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ Y++ + ++Y S +HRD+ NV++ +N +++ D+GLA H
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGLARDIHHI 203
Query: 320 QEYNVRVASRY---FKGPELLADYQY 342
Y R + PE L D Y
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIY 229
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--------KLRLIDWGLAE-FYHPGQ 53
I G ALDY H MG +HR VK +++I + + L +I G + H
Sbjct: 117 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 176
Query: 54 EYNVRVASRYFKGPELL-ADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+Y+V+V + PE+L + Q YD D++S+G + PF
Sbjct: 177 KYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 221
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ + I Y L +LKALDY H MG +HR VK +++I + +
Sbjct: 109 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 150
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 185 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 78 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 133 YLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 185 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E + N L +D ++ + +L+ +
Sbjct: 78 NIIRLEGVVTK--SKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 133 YLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 3 IATGASMALDYCHSMGIMHRDVKPHNVMIDHENR--------KLRLIDWGLAE-FYHPGQ 53
I G ALDY H MG +HR VK +++I + + L +I G + H
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFP 192
Query: 54 EYNVRVASRYFKGPELL-ADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
+Y+V+V + PE+L + Q YD D++S+G + PF
Sbjct: 193 KYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR 303
+ + I Y L +LKALDY H MG +HR VK +++I + +
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 166
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 139 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 194 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 289
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 164
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 165 LD-EKFTVKVADFGLARDMYDKEYYSV 190
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 132 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 187 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 244
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 245 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 282
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 98 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 157
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 158 LD-EKFTVKVADFGLARDMYDKEYYSV 183
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 202 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 95 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I + N ++ D+GL+ P Y R
Sbjct: 150 YLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ + ++L D+GL+ + Y K
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ + ++L D+GL+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRY 160
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 140 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 195 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 290
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 165
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 166 LD-EKFTVKVADFGLARDMYDKEYYSV 191
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 159 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 214 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 271
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 272 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 309
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 125 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 184
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 185 LD-EKFTVKVADFGLARDMYDKEYYSV 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 140 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 195 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 290
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 165
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 166 LD-EKFTVKVADFGLARDMYDKEYYSV 191
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 135 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 190 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 247
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 160
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 161 LD-EKFTVKVADFGLARDMYDKEYYSV 186
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + + Y MG +HRD+ N++I+ N ++ D+GL P Y R
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCML-ASMIFRKEPFFH 101
+ PE +A Y+ + + D+WS G +L M + + P++
Sbjct: 214 IRWTSPEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV S+ ++ E++ N L +D ++ + +L+ +
Sbjct: 107 NIIRLEGVVTK--SKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
Y MG +HRD+ N++I+ N ++ D+GL P Y R
Sbjct: 162 YLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLGRVLEDDPEAAYTTR 208
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 137 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 192 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 103 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 162
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 163 LD-EKFTVKVADFGLARDMYDKEYYSV 188
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVASRY 63
++Y S +HRD+ NV++ EN +++ D+GLA ++Y N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK--NTTNGRLPVKW 225
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFE 123
PE L D ++Y + D+WS G ++ E F G Y + EELF+
Sbjct: 226 M-APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFK 270
Query: 124 YLDKYH 129
L + H
Sbjct: 271 LLKEGH 276
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLA 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+R + ++Y S +HRD+ N M+ E+ + + D+GL+ + G Y A
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCML-AEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 107
S+ + E LAD +Y D+W+ G + ++ R + + G +N +
Sbjct: 199 SKLPVKWLALESLAD-NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ + F QTL ++ ++ ++Y S +HRD+ N M+ E+
Sbjct: 122 LLASRIGENPFNLPLQTLV-----RFMVDIACGMEYLSSRNFIHRDLAARNCML-AEDMT 175
Query: 305 LRLIDWGLAEFYHPGQEYNVRVASRY---FKGPELLADYQYHIELD 347
+ + D+GL+ + G Y AS+ + E LAD Y + D
Sbjct: 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK--GP 67
A+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V K P
Sbjct: 137 AMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 68 ELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
E + +++ + + D+W CM + F K+PFF
Sbjct: 196 ESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 228
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
Y ++ KA+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V
Sbjct: 130 YSLQICKAMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVT 186
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 138 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 193 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 288
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 163
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 164 LD-EKFTVKVADFGLARDMYDKEYYSV 189
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK-- 65
S AL Y S +HRD+ NV++ N ++L D+GL+ + K
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 66 GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFHGHDNYDQLVRI 112
PE + +++ + + D+W G CM ++ +P F G N D + RI
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y Y+L AL Y S +HRD+ NV++ N ++L D+GL+ +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRY 160
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E+Y +
Sbjct: 158 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 213 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 270
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 271 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 308
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 124 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 183
Query: 298 IDHENRKLRLIDWGLAEFYHPGQEYNV 324
+D E +++ D+GLA + + Y+V
Sbjct: 184 LD-EKFTVKVADFGLARDMYDKEYYSV 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA----EFYHPGQEYNVRVASRYFK 65
++Y S +HRD+ NV++ EN +++ D+GLA + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM- 226
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYL 125
PE L D ++Y + D+WS G ++ E F G Y + EELF+ L
Sbjct: 227 APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFKLL 272
Query: 126 DKYH 129
+ H
Sbjct: 273 KEGH 276
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLA 204
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA----EFYHPGQEYNVRVASRYFK 65
++Y S +HRD+ NV++ EN +++ D+GLA + N R+ ++
Sbjct: 169 GMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM- 226
Query: 66 GPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEELFEYL 125
PE L D ++Y + D+WS G ++ E F G Y + EELF+ L
Sbjct: 227 APEALFD-RVYTHQSDVWSFGVLMW------EIFTLGGSPYPG-------IPVEELFKLL 272
Query: 126 DKYH 129
+ H
Sbjct: 273 KEGH 276
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ +T D+ Y+L + ++Y S +HRD+ NV++ EN +++ D+GLA
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLA 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK--GP 67
A+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V K P
Sbjct: 121 AMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 68 ELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
E + +++ + + D+W CM + F K+PFF
Sbjct: 180 ESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 212
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
Y ++ KA+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V
Sbjct: 114 YSLQICKAMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVT 170
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK--GP 67
A+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V K P
Sbjct: 125 AMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 68 ELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
E + +++ + + D+W CM + F K+PFF
Sbjct: 184 ESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFF 216
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 327
Y ++ KA+ Y S+ +HRD+ N+++ ++L D+GL+ + Y V
Sbjct: 118 YSLQICKAMAYLESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVT 174
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASR---YFKGPELLA 338
+ +HRD+ N+++++ENR +++ D+GL + +E + V+ ++ PE L
Sbjct: 132 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 339 DYQYHIELD 347
+ ++ + D
Sbjct: 191 ESKFSVASD 199
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASR---YFK 65
++Y + +HRD+ N+++++ENR +++ D+GL + +E + V+ ++
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 66 GPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 185 APESLTESK-FSVASDVWSFGVVL 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 2 RIATGASMALDYCHSMG---IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 58
RIA G++ L Y H I+HRDVK N+++D E + + D+GLA+ ++ +V
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVX 192
Query: 59 VASRYFKG---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
A R G PE L+ + + + D++ G ML +I + F
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 235
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 2 RIATGASMALDYCHS---MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 58
RIA G++ L Y H I+HRDVK N+++D E + + D+GLA+ ++ +V
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVX 200
Query: 59 VASRYFKG---PELLADYQMYDYSLDMWSLGCMLASMIFRKEPF 99
A R G PE L+ + + + D++ G ML +I + F
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 243
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 256 KQLYQTLTDYDI-------RYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLI 308
+ LY + D I R E++K + Y H+ GI+H+D+K NV D N K+ +
Sbjct: 114 RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD--NGKVVIT 171
Query: 309 DWGL 312
D+GL
Sbjct: 172 DFGL 175
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL 45
+IA + Y H+ GI+H+D+K NV D N K+ + D+GL
Sbjct: 134 QIAQEIVKGMGYLHAKGILHKDLKSKNVFYD--NGKVVITDFGL 175
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G S + Y MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 64 FK--GPELLADYQMYDYSLDMWSLGCMLASMI 93
+ PE +A ++ + + D+WS G ++ ++
Sbjct: 191 IRWTAPEAIA-FRKFTSASDVWSYGIVMWEVV 221
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNN----TDFKQLYQTLTDYDIRYYLYELLKALDYCH 282
NII L+ VV S+ ++ E++ N T K+ T + L + + Y
Sbjct: 84 NIIHLEGVVTK--SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS 141
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVR 325
MG +HRD+ N++I+ N ++ D+GL+ P Y R
Sbjct: 142 DMGYVHRDLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTR 185
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
++ A +DY S +HRD+ NV+++ E++ +++ D+GL + +E
Sbjct: 129 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKD 187
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
R + ++ PE L + Y S D+WS G L ++
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 223
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQ-LYQTLTDYDIRY---YLYELLKALDYCH 282
NI+ + + + LI E + + K+ L + +++ Y ++ K +DY
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLA 338
S +HRD+ NV+++ E++ +++ D+GL + +E R + ++ PE L
Sbjct: 144 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 339 DYQYHIELD 347
+++I D
Sbjct: 203 QSKFYIASD 211
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
++ A +DY S +HRD+ NV+++ E++ +++ D+GL + +E
Sbjct: 117 LKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKD 175
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
R + ++ PE L + Y S D+WS G L ++
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIAS-DVWSFGVTLHELL 211
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQ-LYQTLTDYDIRY---YLYELLKALDYCH 282
NI+ + + + LI E + + K+ L + +++ Y ++ K +DY
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLA 338
S +HRD+ NV+++ E++ +++ D+GL + +E R + ++ PE L
Sbjct: 132 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 339 DYQYHIELD 347
+++I D
Sbjct: 191 QSKFYIASD 199
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
+L+ ++Y HS +++RDVKP N +I K + +ID+GLA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEY 160
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
+ IA ++Y HS +++RDVKP N +I K + +ID+GLA+ Y
Sbjct: 108 LMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEY 160
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASR---YFKGPELLA 338
+ +HR++ N+++++ENR +++ D+GL + +E Y V+ ++ PE L
Sbjct: 133 TKRYIHRNLATRNILVENENR-VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 339 DYQYHIELD 347
+ ++ + D
Sbjct: 192 ESKFSVASD 200
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASR---YFK 65
++Y + +HR++ N+++++ENR +++ D+GL + +E Y V+ ++
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENR-VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 66 GPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 186 APESLTESK-FSVASDVWSFGVVL 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLA 71
H I HRD K NV++ + + L D+GLA + PG+ + + +V +R + PE+L
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLE 198
Query: 72 ---DYQMYDY-SLDMWSLGCMLASMIFR 95
++Q + +DM+++G +L ++ R
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSR 226
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 282 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL 337
H I HRD K NV++ + + L D+GLA + PG+ + + +V +R + PE+L
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 18/150 (12%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNV---RVA 60
G + Y +G +HRD+ NV++D N ++ D+GL+ P Y ++
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 61 SRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV------RIAK 114
R+ PE +A ++ + + D+WS G ++ ++ E + N D + R+
Sbjct: 218 IRW-TAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
Query: 115 VLGTEELFE--YLDKYHIELD--PRFADIL 140
+G LD +H + PRF+ I+
Sbjct: 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV R ++ E++ N +T +D ++ + +L+ +
Sbjct: 111 NIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMR 165
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
Y +G +HRD+ NV++D N ++ D+GL+
Sbjct: 166 YLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLS 198
>pdb|3BIT|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIT|B Chain B, Crystal Structure Of Yeast Spt16 N-Terminal Domain
Length = 453
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 40 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLG------CMLASMI 93
L+DW + G+++++RV++R + Q+Y + S G C +
Sbjct: 254 LLDWTYSPIIQSGKKFDLRVSARS-------TNDQLYGNGCILASCGIRYNNYCSNITRT 306
Query: 94 FRKEPFFHGHDNYDQLVRIAKVLGT-------------EELFEYLDKYHIELDPRFADIL 140
F +P +NYD L+ + K + T E + EY++K EL P F +
Sbjct: 307 FLIDPSEEXANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNI 366
Query: 141 G 141
G
Sbjct: 367 G 367
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG---QEYNV 57
+++ A+ ++Y S +HRD+ N ++ +N L++ D+G++ G +
Sbjct: 216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-VLKISDFGMSREEADGVXAASGGL 274
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
R + PE L +Y Y D+WS G +L
Sbjct: 275 RQVPVKWTAPEAL-NYGRYSSESDVWSFGILL 305
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG---QEYNV 57
+++ A+ ++Y S +HRD+ N ++ +N L++ D+G++ G +
Sbjct: 216 LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN-VLKISDFGMSREEADGVYAASGGL 274
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCML 89
R + PE L +Y Y D+WS G +L
Sbjct: 275 RQVPVKWTAPEAL-NYGRYSSESDVWSFGILL 305
>pdb|3BIP|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIP|B Chain B, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIQ|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
Length = 467
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 26/121 (21%)
Query: 40 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQMYDYSLDMWSLG------CMLASMI 93
L+DW + G+++++RV++R + Q+Y + S G C +
Sbjct: 254 LLDWTYSPIIQSGKKFDLRVSARS-------TNDQLYGNGCILASCGIRYNNYCSNITRT 306
Query: 94 FRKEPFFHGHDNYDQLVRIAKVLGT-------------EELFEYLDKYHIELDPRFADIL 140
F +P +NYD L+ + K + T E + EY++K EL P F +
Sbjct: 307 FLIDPSEEMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNI 366
Query: 141 G 141
G
Sbjct: 367 G 367
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 20 MHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLADYQMYD 77
HRDVKP N+++ ++ L+D+G+A + + V + Y+ PE ++
Sbjct: 156 THRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHAT- 213
Query: 78 YSLDMWSLGCMLASMIFRKEPF 99
Y D+++L C+L + P+
Sbjct: 214 YRADIYALTCVLYECLTGSPPY 235
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 287 MHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLAD 339
HRDVKP N+++ ++ L+D+G+A + + V + Y+ PE ++
Sbjct: 156 THRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSE 209
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNV 57
+IA GA+ +++ H +HRD+K N+++D E ++ D+GLA E + +
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSR 185
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
V + + PE L ++ S D++S G +L +I
Sbjct: 186 IVGTTAYXAPEALRG-EITPKS-DIYSFGVVLLEII 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 139 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 196
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 197 TESKFSVASD 206
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 190
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 191 YAPESLTESK-FSVASDVWSFGVVL 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
S + Y M ++HRD+ N+++ E RK+++ D+GL+ + R R +
Sbjct: 160 SQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKW 218
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMI 93
E L D+ +Y D+WS G +L ++
Sbjct: 219 MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ LT D+ + +++ + + Y M ++HRD+ N+++ E RK+++ D+GL+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLS 197
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 138 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 195
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 196 TESKFSVASD 205
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 189
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 190 YAPESLTESK-FSVASDVWSFGVVL 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 137 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 194
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 195 TESKFSVASD 204
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 188
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 189 YAPESLTESK-FSVASDVWSFGVVL 212
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 171 DDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL-ENLRGGTNII 229
+ Y+L RK+G G + +++ N+ S + + ++GG I
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 68
Query: 230 TLQ---------AVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDY 280
+++ +V + + + +F + + L D +++ ++Y
Sbjct: 69 SIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD--------QMISRIEY 120
Query: 281 CHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 316
HS +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 11 LDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 49
++Y HS +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 150 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 207
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 208 TESKFSVASD 217
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 201
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 202 YAPESLTESK-FSVASDVWSFGVVL 225
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 150 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 207
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 208 TESKFSVASD 217
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 201
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 202 YAPESLTESK-FSVASDVWSFGVVL 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 135 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 192
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 193 TESKFSVASD 202
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 187 YAPESLTESK-FSVASDVWSFGVVL 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ---EYNVRV 326
YL+E + L H I HRD+K NV++ + N + D+GLA + G+ + + +V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKN-NLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 327 ASRYFKGPELL 337
+R + PE+L
Sbjct: 195 GTRRYMAPEVL 205
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL- 70
H I HRD+K NV++ + N + D+GLA + G+ + + +V +R + PE+L
Sbjct: 148 HKPAISHRDIKSKNVLLKN-NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 71 --ADYQMYDY-SLDMWSLGCMLASMIFR 95
++Q + +DM+++G +L + R
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 132 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 189
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 190 TESKFSVASD 199
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 183
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 184 YAPESLTESK-FSVASDVWSFGVVL 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 163 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 220
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 221 TESKFSVASD 230
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 214
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 215 YAPESLTESK-FSVASDVWSFGVVL 238
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 136 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 193
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 194 TESKFSVASD 203
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 187
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 188 YAPESLTESK-FSVASDVWSFGVVL 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 132 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 189
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 190 TESKFSVASD 199
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 183
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 184 YAPESLTESK-FSVASDVWSFGVVL 207
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 131 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 188
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 189 TESKFSVASD 198
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 182
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 183 YAPESLTESK-FSVASDVWSFGVVL 206
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q ++ D+ + Y ++ K ++Y
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 130 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 187
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 188 TESKFSVASD 197
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 181
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 182 YAPESLTESK-FSVASDVWSFGVVL 205
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
+L+ ++Y H+ +++RDVKP N ++ K + +ID+GLA+ Y
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY 155
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
+ IA ++Y H+ +++RDVKP N ++ K + +ID+GLA+ Y
Sbjct: 103 LMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY 155
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
S + Y M ++HRD+ N+++ E RK+++ D+GL+ + R R +
Sbjct: 160 SQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKW 218
Query: 65 KGPELLADYQMYDYSLDMWSLGCMLASMI 93
E L D+ +Y D+WS G +L ++
Sbjct: 219 MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+ LT D+ + +++ + + Y M ++HRD+ N+++ E RK+++ D+GL+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLS 197
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHV---NNTDFKQLYQTLTDY-DIRYYLYELLKALDYCH 282
NI+ + V R LI E++ + D+ Q + D+ + Y ++ K ++Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 135 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 192
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 193 TESKFSVASD 202
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 187 YAPESLTESK-FSVASDVWSFGVVL 210
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+++ S +HRD+ N+++ EN +++ D+GLA + +Y + +R +
Sbjct: 211 GMEFLSSRKCIHRDLAARNILL-SENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMA 269
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 270 PESIFD-KIYSTKSDVWSYGVLL 291
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ +T D+ Y +++ + +++ S +HRD+ N+++ EN +++ D+GLA +
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILL-SENNVVKICDFGLARDIYKN 252
Query: 320 QEYNVRVASRY---FKGPELLADYQYHIELD 347
+Y + +R + PE + D Y + D
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSD 283
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
+ A + +DY +HRD+ N+++ EN ++ D+GL+ GQE V
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSR----GQEVYVKKT 189
Query: 58 --RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
R+ R+ L +Y +Y + D+WS G +L ++
Sbjct: 190 MGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 225
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TL+ + ++ ++ + +DY +HRD+ N+++ EN ++ D+GL+ G
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSR----G 181
Query: 320 QEYNVR 325
QE V+
Sbjct: 182 QEVYVK 187
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
+ A + +DY +HRD+ N+++ EN ++ D+GL+ GQE V
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSR----GQEVYVKKT 199
Query: 58 --RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
R+ R+ L +Y +Y + D+WS G +L ++
Sbjct: 200 MGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 235
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TL+ + ++ ++ + +DY +HRD+ N+++ EN ++ D+GL+ G
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSR----G 191
Query: 320 QEYNVR 325
QE V+
Sbjct: 192 QEVYVK 197
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ + A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V
Sbjct: 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVG 160
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
S++ + PE+L Y + D+W+ G ++
Sbjct: 161 SKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLM 191
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ +A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPV 165
Query: 331 -FKGPELLADYQYHIELDPRFADILGRH----SRKRWERFVHTEN 370
+ PE+L ++ + D +L + +ERF ++E
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 210
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++ +
Sbjct: 116 AMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSP 173
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 174 PEVLM-YSKFSSKSDIWAFGVLM 195
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ +A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPV 169
Query: 331 -FKGPELLADYQYHIELDPRFADILGRH----SRKRWERFVHTEN 370
+ PE+L ++ + D +L + +ERF ++E
Sbjct: 170 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++ +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSP 189
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 190 PEVLM-YSKFSSKSDIWAFGVLM 211
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ +A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLSR-YVLDDEYTSSVGSKFPV 185
Query: 331 -FKGPELLADYQYHIELDPRFADILGRH----SRKRWERFVHTEN 370
+ PE+L ++ + D +L + +ERF ++E
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++ +
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSP 180
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 181 PEVLM-YSKFSSKSDIWAFGVLM 202
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ +A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPV 176
Query: 331 -FKGPELLADYQYHIELDPRFADILGRH----SRKRWERFVHTEN 370
+ PE+L ++ + D +L + +ERF ++E
Sbjct: 177 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++ +
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSP 174
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 175 PEVLM-YSKFSSKSDIWAFGVLM 196
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY-- 330
++ +A++Y S +HRD+ N +++ + +++ D+GL+ Y EY V S++
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSVGSKFPV 170
Query: 331 -FKGPELLADYQYHIELDPRFADILGRH----SRKRWERFVHTEN 370
+ PE+L ++ + D +L + +ERF ++E
Sbjct: 171 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 26/154 (16%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGL---------AEFYHPGQEYN 56
G + Y +G +HRD+ NV++D N ++ D+GL A G +
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 57 VRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV------ 110
+R + PE +A ++ + + D+WS G ++ ++ E + N D +
Sbjct: 218 IR-----WTAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
Query: 111 RIAKVLGTEELFE--YLDKYHIELD--PRFADIL 140
R+ +G LD +H + PRF+ I+
Sbjct: 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELL-------KALD 279
NII L+ VV R ++ E++ N +T +D ++ + +L+ +
Sbjct: 111 NIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRT---HDGQFTIMQLVGMLRGVGAGMR 165
Query: 280 YCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
Y +G +HRD+ NV++D N ++ D+GL+
Sbjct: 166 YLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLS 198
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
+L+ ++Y HS +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 181
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
+ IA ++Y HS +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 129 LMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 181
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
+L+ ++Y HS +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
+ IA ++Y HS +++RDVKP N +I K + +ID+ LA+ Y
Sbjct: 108 LMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQT----LTDYDIRYYLYELLKALDYCH 282
NI+ + V R LI E + ++ Q + + Y ++ K ++Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 283 SMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYFKGPELL 337
+ +HRD+ N+++++ENR +++ D+GL + P + +V + ++ PE L
Sbjct: 135 TKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESL 192
Query: 338 ADYQYHIELD 347
+ ++ + D
Sbjct: 193 TESKFSVASD 202
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRV-----ASRYF 64
++Y + +HRD+ N+++++ENR +++ D+GL + P + +V + ++
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE L + + + + D+WS G +L
Sbjct: 187 YAPESLTESK-FSVASDVWSFGVVL 210
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYD-IRYYLYELLKALDYCHS 283
I+ + V P ++ L+ E++ + DF Q ++ D + Y ++ K ++Y S
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLAD 339
+HRD+ N++++ E +++ D+GLA+ ++Y V + ++ PE L+D
Sbjct: 133 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
++Y S +HRD+ N++++ E +++ D+GLA+ ++Y V + ++
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 66 GPELLADYQMYDYSLDMWSLGCML 89
PE L+D ++ D+WS G +L
Sbjct: 185 APESLSD-NIFSRQSDVWSFGVVL 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 255 FKQLYQT-LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+K LY+ LT + Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN-VVKICDFGLA 191
Query: 314 EFYHPGQEYNVRVASRY---FKGPELLADYQYHIELD 347
+ +Y + +R + PE + D Y I+ D
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 228
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 212 WMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
+ Y++ K + + S +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + + Y E D
Sbjct: 232 LPVKWMAPESIFNCVYTFESD 252
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+ + S +HRD+ N+++ H R ++ D+GLA Y V+ +R +
Sbjct: 180 GMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARHIKNDSNYVVKGNARLPVKWMA 238
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
PE + + +Y + D+WS G IF E F G Y +
Sbjct: 239 PESIFNC-VYTFESDVWSYG------IFLWELFSLGSSPYPGM 274
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 201 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 259
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 260 MAPETIFD-RVYTIQSDVWSFGVLL 283
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 255 LPLKWMAPETIFDRVYTIQSD 275
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYD-IRYYLYELLKALDYCHS 283
I+ + V P ++ L+ E++ + DF Q ++ D + Y ++ K ++Y S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLAD 339
+HRD+ N++++ E +++ D+GLA+ ++Y V + ++ PE L+D
Sbjct: 146 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
++Y S +HRD+ N++++ E +++ D+GLA+ ++Y V + ++
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 66 GPELLADYQMYDYSLDMWSLGCML 89
PE L+D ++ D+WS G +L
Sbjct: 198 APESLSD-NIFSRQSDVWSFGVVL 220
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA---EFYHPGQEYNVR 58
+IA GA+ +++ H +HRD+K N+++D E ++ D+GLA E + +
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 59 VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
V + + PE L ++ S D++S G +L +I
Sbjct: 196 VGTTAYMAPEALRG-EITPKS-DIYSFGVVLLEII 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYD-IRYYLYELLKALDYCHS 283
I+ + V P ++ L+ E++ + DF Q ++ D + Y ++ K ++Y S
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFKGPELLAD 339
+HRD+ N++++ E +++ D+GLA+ ++Y V + ++ PE L+D
Sbjct: 134 RRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV----RVASRYFK 65
++Y S +HRD+ N++++ E +++ D+GLA+ ++Y V + ++
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 66 GPELLADYQMYDYSLDMWSLGCML 89
PE L+D ++ D+WS G +L
Sbjct: 186 APESLSD-NIFSRQSDVWSFGVVL 208
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 210 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 268
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 269 MAPETIFD-RVYTIQSDVWSFGVLL 292
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 264 LPLKWMAPETIFDRVYTIQSD 284
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 203 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 261
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 262 MAPETIFD-RVYTIQSDVWSFGVLL 285
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 257 LPLKWMAPETIFDRVYTIQSD 277
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 208 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 266
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 267 MAPETIFD-RVYTIQSDVWSFGVLL 290
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 262 LPLKWMAPETIFDRVYTIQSD 282
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 20/156 (12%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL-ENLRGGTNIITL 231
Y+L RK+G G + +++ ++ + + + + ++GG I T+
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 232 Q---------AVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCH 282
+ +V + + + +F + + L D +++ ++Y H
Sbjct: 69 RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD--------QMISRIEYIH 120
Query: 283 SMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 316
S +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 11 LDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 49
++Y HS +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/156 (19%), Positives = 66/156 (42%), Gaps = 20/156 (12%)
Query: 173 YQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXL-ENLRGGTNIITL 231
Y+L RK+G G + +++ ++ + + + + ++GG I T+
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 232 Q---------AVVKDPVSRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCH 282
+ +V + + + +F + + L D +++ ++Y H
Sbjct: 71 RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD--------QMISRIEYIH 122
Query: 283 SMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 316
S +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 11 LDYCHSMGIMHRDVKPHNVM--IDHENRKLRLIDWGLAEFY 49
++Y HS +HRDVKP N + + + + +ID+GLA+ Y
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 149 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 207
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 208 MAPETIFD-RVYTIQSDVWSFGVLL 231
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSD 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
+ Y++ K + + S +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + + Y E D
Sbjct: 225 LPVKWMAPESIFNCVYTFESD 245
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+ + S +HRD+ N+++ H R ++ D+GLA Y V+ +R +
Sbjct: 173 GMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 231
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
PE + + +Y + D+WS G IF E F G Y +
Sbjct: 232 PESIFNC-VYTFESDVWSYG------IFLWELFSLGSSPYPGM 267
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 149 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 207
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 208 MAPETIFD-RVYTIQSDVWSFGVLL 231
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSD 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 255 FKQLYQT-LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA 313
+K LY+ LT + Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKN-VVKIXDFGLA 191
Query: 314 EFYHPGQEYNVRVASRY---FKGPELLADYQYHIELD 347
+ +Y + +R + PE + D Y I+ D
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 228
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKN-VVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 212 WMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
+ Y++ K + + S +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + + Y E D
Sbjct: 209 LPVKWMAPESIFNCVYTFESD 229
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+ + S +HRD+ N+++ H R ++ D+GLA Y V+ +R +
Sbjct: 157 GMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 215
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
PE + + +Y + D+WS G IF E F G Y +
Sbjct: 216 PESIFNC-VYTFESDVWSYG------IFLWELFSLGSSPYPGM 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 194 VAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLK 252
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 253 WMAPETIFD-RVYTIQSDVWSFGVLL 277
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 249 LPLKWMAPETIFDRVYTIQSD 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLK 215
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 216 WMAPETIFD-RVYTIQSDVWSFGVLL 240
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSD 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
+ Y++ K + + S +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + + Y E D
Sbjct: 227 LPVKWMAPESIFNCVYTFESD 247
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+ + S +HRD+ N+++ H R ++ D+GLA Y V+ +R +
Sbjct: 175 GMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 233
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
PE + + +Y + D+WS G IF E F G Y +
Sbjct: 234 PESIFNC-VYTFESDVWSYG------IFLWELFSLGSSPYPGM 269
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R +
Sbjct: 160 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDARLPLKW 218
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 219 MAPETIFD-RVYTIQSDVWSFGVLL 242
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + +Y + +R
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 214 LPLKWMAPETIFDRVYTIQSD 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA----EFYHPGQEYNV 57
+IA GA+ +++ H +HRD+K N+++D E ++ D+GLA +F +
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
V + + PE L ++ S D++S G +L +I
Sbjct: 196 -VGTTAYMAPEALRG-EITPKS-DIYSFGVVLLEII 228
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQE 54
+++A G + Y S +HRD+ N M+D E +++ D+GLA E +
Sbjct: 139 LQVAKG----MKYLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 55 YNVRVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA- 113
++ ++ L Q + D+WS G +L ++ R P + + +D V +
Sbjct: 194 TGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 251
Query: 114 --KVLGTE----ELFEYLDKY---HIELDPRFADILGR 142
++L E L+E + K E+ P F++++ R
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 289
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + Y S +HRD+ N M
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 164
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 165 LD-EKFTVKVADFGLA 179
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
+ Y++ K + + S +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + + Y E D
Sbjct: 232 LPVKWMAPESIFNCVYTFESD 252
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
+ + S +HRD+ N+++ H R ++ D+GLA Y V+ +R +
Sbjct: 180 GMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMA 238
Query: 67 PELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 109
PE + + +Y + D+WS G IF E F G Y +
Sbjct: 239 PESIFNC-VYTFESDVWSYG------IFLWELFSLGSSPYPGM 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
+ A + +DY +HR++ N+++ EN ++ D+GL+ GQE V
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVG-ENYVAKIADFGLSR----GQEVYVKKT 196
Query: 58 --RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
R+ R+ L +Y +Y + D+WS G +L ++
Sbjct: 197 MGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIV 232
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
TL+ + ++ ++ + +DY +HR++ N+++ EN ++ D+GL+ G
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG-ENYVAKIADFGLSR----G 188
Query: 320 QEYNVR 325
QE V+
Sbjct: 189 QEVYVK 194
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ------TLTDYDIRYYLYELLKALDY 280
NI+ L A+ ++ +R LI E + + L + + L +++ +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 281 CHSMGIMHRDVKPHNVM--IDHENRKL-RLIDWGLA 313
GI+HR++KP N+M I + + + +L D+G A
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM--IDHENRKL-RLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+++ GI+HR++KP N+M I + + + +L D+G A +++ + +
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLH 183
Query: 67 PE------LLADYQ-MYDYSLDMWSLGCML-----ASMIFRKEPFFHGHDNYDQLVRI 112
P+ L D+Q Y ++D+WS+G S+ FR PF N + + +I
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNKEVMYKI 239
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEY-NVRV 59
++ ++ ++Y + +HRD+ N M+ ++ + + D+GL++ + G Y R+
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCML-RDDMTVCVADFGLSKKIYSGDYYRQGRI 208
Query: 60 ASRYFK--GPELLADYQMYDYSLDMWSLGCMLASMIFRKE---PFFHGHDNYDQLV 110
A K E LAD ++Y D+W+ G + + R P H+ YD L+
Sbjct: 209 AKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL 263
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ E + + + D L LL++L G H DV+P NVM+D +
Sbjct: 319 LVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVD-ARQH 377
Query: 305 LRLIDWG 311
RLID+G
Sbjct: 378 ARLIDFG 384
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG 44
+L G H DV+P NVM+D + RLID+G
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVD-ARQHARLIDFG 384
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ E + + + D L LL++L G H DV+P NVM+D +
Sbjct: 319 LVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVD-ARQH 377
Query: 305 LRLIDWG 311
RLID+G
Sbjct: 378 ARLIDFG 384
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG 44
+L G H DV+P NVM+D + RLID+G
Sbjct: 351 SLAALEKQGFWHDDVRPWNVMVD-ARQHARLIDFG 384
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 19 IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLADYQMYDY 78
I+HRD+K N+ I +++ D GLA V + + F PE + YD
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-IGTPEFXAPEXYEE--KYDE 208
Query: 79 SLDMWSLG-CML 89
S+D+++ G C L
Sbjct: 209 SVDVYAFGXCXL 220
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 267 IRYYLYELLKALDYCHSMG--IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV 324
+R + ++LK L + H+ I+HRD+K N+ I +++ D GLA V
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 190
Query: 325 RVASRYFKGPE 335
+ + F PE
Sbjct: 191 -IGTPEFXAPE 200
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 65
G + + Y M +HRD+ N++++ N ++ D+GL+ F +S K
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNS-NLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 66 ------GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
PE +A ++ + + D WS G M M F + P++
Sbjct: 185 IPIRWTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYW 225
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR--- 58
+IA GA+ +++ H +HRD+K N+++D E ++ D+GLA + +
Sbjct: 131 KIAQGAANGINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 59 VASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI 93
V + + PE L ++ S D++S G +L +I
Sbjct: 190 VGTTAYMAPEALRG-EITPKS-DIYSFGVVLLEII 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNV---RVA 60
G + + Y +M +HRD+ N++++ N ++ D+GL+ P Y ++
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILVN-SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 61 SRYFKGPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFFH 101
R+ PE ++ Y+ + + D+WS G M M + + P++
Sbjct: 214 IRW-TAPEAIS-YRKFTSASDVWSFGIVMWEVMTYGERPYWE 253
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 227 NIITLQAVVKDPVSRTPALIFEHVNNTDFKQLYQ------TLTDYDIRYYLYELLKALDY 280
NI+ L A+ ++ +R LI E + + L + + L +++ +++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 281 CHSMGIMHRDVKPHNVM--IDHENRKL-RLIDWGLA 313
GI+HR++KP N+M I + + + +L D+G A
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 10 ALDYCHSMGIMHRDVKPHNVM--IDHENRKL-RLIDWGLAEFYHPGQEYNVRVASRYFKG 66
+++ GI+HR++KP N+M I + + + +L D+G A +++ + +
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 67 PE------LLADYQ-MYDYSLDMWSLGCML-----ASMIFRKEPFFHGHDNYDQLVRI 112
P+ L D+Q Y ++D+WS+G S+ FR PF N + + +I
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR--PFEGPRRNKEVMYKI 239
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + Y M +HRD+ N+++ + N ++ D+G++ P Y R
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILV-NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 64 FK--GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
+ PE +A Y+ + + D+WS G M M + + P++
Sbjct: 198 IRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW 236
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 244 ALIFE----HVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMG-IMHRDVKPHNVMI 298
++FE H+ K YQ L ++ + ++L+ LDY H+ I+H D+KP N+++
Sbjct: 121 CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
Query: 299 DHENRKLRLIDWGLAEFYHPG 319
+ +R + E+ G
Sbjct: 181 SVNEQYIRRLAAEATEWQRSG 201
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASR 62
G + + Y M +HRD+ N++++ N ++ D+GL+ F Y + +
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNS-NLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
+ PE +A ++ + + D WS G M M F + P++
Sbjct: 183 IPIRWTAPEAIA-FRKFTSASDAWSYGIVMWEVMSFGERPYW 223
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 244 ALIFE----HVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMG-IMHRDVKPHNVMI 298
++FE H+ K YQ L ++ + ++L+ LDY H+ I+H D+KP N+++
Sbjct: 105 CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
Query: 299 DHENRKLRLIDWGLAEFYHPG 319
+ +R + E+ G
Sbjct: 165 SVNEQYIRRLAAEATEWQRSG 185
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 245 LIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRK 304
L+ E + + + D L LL++L G H DV+P NVM+D +
Sbjct: 319 LVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKKGFWHDDVRPWNVMVD-ARQH 377
Query: 305 LRLIDWG 311
RLID+G
Sbjct: 378 ARLIDFG 384
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWG 44
+L G H DV+P NVM+D + RLID+G
Sbjct: 351 SLAALEKKGFWHDDVRPWNVMVD-ARQHARLIDFG 384
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 18/90 (20%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFY----------HPGQEYNVRV 59
++Y S +HRD+ N++++ E +++ D+GLA+ PGQ
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQ------ 175
Query: 60 ASRYFKGPELLADYQMYDYSLDMWSLGCML 89
+ ++ PE L+D ++ D+WS G +L
Sbjct: 176 SPIFWYAPESLSD-NIFSRQSDVWSFGVVL 204
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 228 IITLQAVVKDPVSRTPALIFEHVNNT---DFKQLYQTLTDYD-IRYYLYELLKALDYCHS 283
I+ + V P L+ E++ + DF Q ++ D + Y ++ K ++Y S
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 284 MGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
+HRD+ N++++ E +++ D+GLA+
Sbjct: 130 RRCVHRDLAARNILVESEAH-VKIADFGLAKL 160
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ + +E + V S++ +
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLDDEETS-SVGSKFPVRWSP 189
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 190 PEVLM-YSKFSSKSDIWAFGVLM 211
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + Y M +HRD+ N++++ N ++ D+G++ P Y R
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNS-NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 64 FK--GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
+ PE +A Y+ + + D+WS G M M + + P++
Sbjct: 183 IRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNVRVASRY 63
G + Y M +HRD+ N+++ + N ++ D+G++ P Y R
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILV-NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 64 FK--GPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
+ PE +A Y+ + + D+WS G M M + + P++
Sbjct: 177 IRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYW 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---FKG 66
A++Y S +HRD+ N +++ + +++ D+GL+ Y EY S++ +
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQG-VVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSP 174
Query: 67 PELLADYQMYDYSLDMWSLGCML 89
PE+L Y + D+W+ G ++
Sbjct: 175 PEVLM-YSKFSSKSDIWAFGVLM 196
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYH--PGQEYNV---RVA 60
G + + Y MG +HRD+ N++++ N ++ D+GL+ P Y ++
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVN-SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 61 SRYFKGPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
R+ PE + Y+ + + D+WS G M M + + P++
Sbjct: 212 VRW-TAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
TL+ D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDS 218
Query: 321 EYNVRVASRY---FKGPELLADYQYHIELD 347
Y V+ +R + PE + D Y ++ D
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 226 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 256
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
++L + H +++RD+KP N +I N K + ++D+G+ +FY
Sbjct: 114 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
H +++RD+KP N +I N K + ++D+G+ +FY
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 273 ELLKALDYCHSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 316
++L + H +++RD+KP N +I N K + ++D+G+ +FY
Sbjct: 113 QMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 160
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 15 HSMGIMHRDVKPHNVMIDHENRK----LRLIDWGLAEFY 49
H +++RD+KP N +I N K + ++D+G+ +FY
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 160
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 25/146 (17%)
Query: 2 RIATGASMALDYCHSM---------GIMHRDVKPHNVMIDHENRKLRLIDWGLA------ 46
R+A + L Y H+ I HRD+ NV++ ++ + + D+GL+
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGN 173
Query: 47 EFYHPGQEYNV---RVASRYFKGPELLA------DYQMYDYSLDMWSLGCMLASMIFRKE 97
PG+E N V + + PE+L D + +DM++LG + + R
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 98 PFFHGHDNYDQLVRIAKVLGTEELFE 123
F G + + +G FE
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFE 259
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
+ +++ L ++ + L Y HSM ++H D+KP N+ I
Sbjct: 110 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 145
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID 32
L Y HSM ++H D+KP N+ I
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFIS 145
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 61
+IA G ++Y S ++H+D+ NV++ ++ +++ D GL + Y + S
Sbjct: 153 QIAAG----MEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 62 RY---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVL 116
+ PE + Y + D+WS G +L + + G+ N D +++R +VL
Sbjct: 208 LLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 117 GT-EELFEYLDKYHIEL-------DPRFADILGRARVYADVN 150
++ ++ IE PRF DI R R + +++
Sbjct: 267 PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGNLS 308
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
+ +++ L ++ + L Y HSM ++H D+KP N+ I
Sbjct: 114 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID 32
L Y HSM ++H D+KP N+ I
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFIS 149
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 252 NTDFKQLYQTLTDYDIRYYLYEL----LKALDYCHSMGIMHRDVKPHNVMIDHEN-RKLR 306
+D +++Y+ R + +L L L+Y H +H D+K N++++++N ++
Sbjct: 135 GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY 194
Query: 307 LIDWGLAEFYHP 318
L+D+GLA Y P
Sbjct: 195 LVDYGLAYRYCP 206
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LDYCHSMGIMHRDVKPHNVMIDHEN-RKLRLIDWGLAEFYHP 51
L+Y H +H D+K N++++++N ++ L+D+GLA Y P
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
+ +++ L ++ + L Y HSM ++H D+KP N+ I
Sbjct: 112 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID 32
L Y HSM ++H D+KP N+ I
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 264 DYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMID 299
+ +++ L ++ + L Y HSM ++H D+KP N+ I
Sbjct: 112 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 147
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 10 ALDYCHSMGIMHRDVKPHNVMID 32
L Y HSM ++H D+KP N+ I
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFIS 147
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 6 GASMALDYCHSMG----------IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-E 54
G+ + L++C + ++HRD+ NV++ N +++ D+GLA + E
Sbjct: 115 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKE 173
Query: 55 YNVRVASRYFKGPEL-LADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
YN K L Y+ + + D+WS G + M F +P+
Sbjct: 174 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV 324
+ ++ K + Y ++HRD+ NV++ N +++ D+GLA + EYN
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNA 176
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 252 NTDFKQLYQTLTDYDIRYYLYEL----LKALDYCHSMGIMHRDVKPHNVMIDHEN-RKLR 306
+D +++Y+ R + +L L L+Y H +H D+K N++++++N ++
Sbjct: 135 GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY 194
Query: 307 LIDWGLAEFYHP 318
L+D+GLA Y P
Sbjct: 195 LVDYGLAYRYCP 206
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LDYCHSMGIMHRDVKPHNVMIDHEN-RKLRLIDWGLAEFYHP 51
L+Y H +H D+K N++++++N ++ L+D+GLA Y P
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNV--- 57
+ IA + + Y S +HRD+ N ++ EN +++ D+G++ + Y V
Sbjct: 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-ENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDN 105
+ R+ ++ Y+ + D+WSLG +L + + K+P++ +N
Sbjct: 190 TMLPIRWMPPESIM--YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + + + +R +
Sbjct: 158 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDXVRKGDARLPLKW 216
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 217 MAPETIFD-RVYTIQSDVWSFGVLL 240
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSD 232
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 6 GASMALDYCHSMG----------IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-E 54
G+ + L++C + ++HRD+ NV++ N +++ D+GLA + E
Sbjct: 138 GSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKE 196
Query: 55 YNVRVASRYFKGPEL-LADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
YN K L Y+ + + D+WS G + M F +P+
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYN 323
+ ++ K + Y ++HRD+ NV++ N +++ D+GLA + EYN
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYN 198
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 252 NTDFKQLYQTLTDYDIRYYLYEL----LKALDYCHSMGIMHRDVKPHNVMIDHEN-RKLR 306
+D +++Y+ R + +L L L+Y H +H D+K N++++++N ++
Sbjct: 135 GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY 194
Query: 307 LIDWGLAEFYHP 318
L+D+GLA Y P
Sbjct: 195 LVDYGLAYRYCP 206
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 11 LDYCHSMGIMHRDVKPHNVMIDHEN-RKLRLIDWGLAEFYHP 51
L+Y H +H D+K N++++++N ++ L+D+GLA Y P
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 2 RIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVAS 61
+IA G ++Y S ++H+D+ NV++ ++ +++ D GL + Y + S
Sbjct: 136 QIAAG----MEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 62 RY---FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD--QLVRIAKVL 116
+ PE + Y + D+WS G +L + + G+ N D +++R +VL
Sbjct: 191 LLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 249
Query: 117 GT-EELFEYLDKYHIEL-------DPRFADILGRARVYAD 148
++ ++ IE PRF DI R R + +
Sbjct: 250 PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + + +R +
Sbjct: 149 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDARLPLKW 207
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 208 MAPETIFD-RVYTIQSDVWSFGVLL 231
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSD 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + + +R +
Sbjct: 149 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDARLPLKW 207
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 208 MAPETIFD-RVYTIQSDVWSFGVLL 231
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 203 LPLKWMAPETIFDRVYTIQSD 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 226 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 256
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 261 TLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ 320
T + D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDS 218
Query: 321 EYNVRVASRY---FKGPELLADYQYHIELD 347
Y V+ +R + PE + D Y ++ D
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSD 248
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 1 MRIATGASMALDYCHSMG--IMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 58
+ +A + ++Y H+ I+HRD+K N+++D + +++ D+GL+ +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK-YTVKVCDFGLSRLKASXFLXSKX 198
Query: 59 VA-SRYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 110
A + + PE+L D + S D++S G +L + ++P+ G+ N Q+V
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQPW--GNLNPAQVV 248
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 272 YELLKALDYCHSMG--IMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
Y++ K ++Y H+ I+HRD+K N+++D + +++ D+GL+
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK-YTVKVCDFGLSRL 188
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 6 GASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE---YNVRVASR 62
G + + Y M +HRD+ N++++ N ++ D+GL+ F Y + +
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 63 Y---FKGPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPFF 100
+ PE + Y+ + + D+WS G M M + + P++
Sbjct: 202 IPIRWTAPEAI-QYRKFTSASDVWSYGIVMWEVMSYGERPYW 242
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 228 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 258
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 260 QTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPG 319
+ L+ D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMND 219
Query: 320 QEYNVRVASRY---FKGPELLADYQYHIELD 347
Y V+ +R + PE + D Y ++ D
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSD 250
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 214 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 244
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 266 DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 325
D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVK 211
Query: 326 VASRY---FKGPELLADYQYHIELD 347
+R + PE + D Y ++ D
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSD 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 222 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 252
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 266 DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 325
D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVK 219
Query: 326 VASRY---FKGPELLADYQYHIELD 347
+R + PE + D Y ++ D
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSD 244
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 10 ALDYCHSM------GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
+LD C +M +HRD+ NV++ +N ++ D+GL + Q+ ++ ++
Sbjct: 108 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTG-KLPVKW 165
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
PE L + + S D+WS G +L
Sbjct: 166 -TAPEALREKKFSTKS-DVWSFGILL 189
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 216 WMAPETIFD-RVYTIQSDVWSFGVLL 240
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSD 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 262 LTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEF 315
L D+ + ++ K + Y + ++HRD+ NV++ N +++ D+GLA
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNH-VKITDFGLARL 168
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
M+IA G S Y + ++HRD+ NV++ N +++ D+GLA + EY+
Sbjct: 126 MQIAKGMS----YLEDVRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADG 180
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L + + + D+WS G + M F +P+
Sbjct: 181 GKVPIKWMALESIL--RRRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY---F 64
+ +++ S +HRD+ N+++ +N +++ D+GLA + + +R +
Sbjct: 158 AKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDARLPLKW 216
Query: 65 KGPELLADYQMYDYSLDMWSLGCML 89
PE + D ++Y D+WS G +L
Sbjct: 217 MAPETIFD-RVYTIQSDVWSFGVLL 240
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSD 232
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 11 LDYCHSMGIMHRDVKPHNVMI----------DHENRKLRLIDWGLA---EFYHPGQEYNV 57
++ H I+H D+KP N ++ D + L LID G + + + G +
Sbjct: 185 IEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTA 244
Query: 58 RVASRYFKGPELLADYQMYDYSLDMWSLGCMLASMIF 94
+ + F+ E+L++ + ++Y +D + + + M+F
Sbjct: 245 KCETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLF 280
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMI----------DHENRKLRLIDWGLA---EFY 316
+ +L ++ H I+H D+KP N ++ D + L LID G + + +
Sbjct: 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236
Query: 317 HPGQEYNVRVASRYFKGPELLADYQYHIELD 347
G + + + F+ E+L++ ++ ++D
Sbjct: 237 PKGTIFTAKCETSGFQCVEMLSNKPWNYQID 267
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 10 ALDYCHSM------GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
+LD C +M +HRD+ NV++ +N ++ D+GL + Q+ ++ ++
Sbjct: 123 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTG-KLPVKW 180
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
PE L + + S D+WS G +L
Sbjct: 181 -TAPEALREKKFSTKS-DVWSFGILL 204
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 10 ALDYCHSM------GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
+LD C +M +HRD+ NV++ +N ++ D+GL + Q+ ++ ++
Sbjct: 295 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTG-KLPVKW 352
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
PE L + + S D+WS G +L
Sbjct: 353 -TAPEALREKKFSTKS-DVWSFGILL 376
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVA 60
+ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 161 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGN 219
Query: 61 SRY---FKGPELLADYQMYDYSLDMWSLGCML 89
+R + PE + D +Y D+WS G +L
Sbjct: 220 ARLPVKWMAPESIFDC-VYTVQSDVWSYGILL 250
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 266 DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 325
D+ ++ ++ + + + S +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVK 217
Query: 326 VASRY---FKGPELLADYQYHIELD 347
+R + PE + D Y ++ D
Sbjct: 218 GNARLPVKWMAPESIFDCVYTVQSD 242
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 7 ASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY--- 63
+ +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
+ PE + D ++Y D+WS G +L
Sbjct: 216 WMAPETIFD-RVYTIQSDVWSFGVLL 240
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 270 YLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASR 329
Y +++ K +++ S +HRD+ N+++ +N +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKN-VVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 330 Y---FKGPELLADYQYHIELD 347
+ PE + D Y I+ D
Sbjct: 212 LPLKWMAPETIFDRVYTIQSD 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 29/205 (14%)
Query: 158 WDYESYVVDWGQQDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXX 217
WD +++ + ++ +LV++LG G++ EV+ S+
Sbjct: 3 WDKDAWEI---PRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEA 59
Query: 218 XLENLRGGTNIITLQAVV--KDPVSRTPALIFEHVNNT---DF-------KQLYQTLTDY 265
L ++ L AVV ++P+ +I E++ DF K L L D+
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIY----IITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 266 DIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVR 325
++ + + Y +HRD++ NV++ E+ ++ D+GLA EY R
Sbjct: 116 SA-----QIAEGMAYIERKNYIHRDLRAANVLV-SESLMCKIADFGLARVIE-DNEYTAR 168
Query: 326 VASRY---FKGPELLADYQYHIELD 347
+++ + PE + + I+ D
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSD 193
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 10 ALDYCHSM------GIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 63
+LD C +M +HRD+ NV++ +N ++ D+GL + Q+ ++ ++
Sbjct: 114 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA-KVSDFGLTKEASSTQDTG-KLPVKW 171
Query: 64 FKGPELLADYQMYDYSLDMWSLGCML 89
PE L + S D+WS G +L
Sbjct: 172 -TAPEALREAAFSTKS-DVWSFGILL 195
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 479 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 538 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 480 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 539 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 596 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 630
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 196 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 253 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 287
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 196 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 253 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 287
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 135 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 194 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 251 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 285
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 115 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 174 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 231 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 265
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 117 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 176 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 267
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 180 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 237 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 271
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 224
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 225 LD-EKFTVKVADFGLA 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLA------EFYHPGQEYNVRVAS 61
SM + Y +HRD+ NV++ ++ ++ D+GL+ E Y+ Q +
Sbjct: 127 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 62 RYFKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT- 118
Y PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 186 WY--APECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
Query: 119 ----EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 243 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 170 QDDYQLVRKLGRGKYSEVFEAINVQSSDXXXXXXXXXXXXXXXXXXXXXLENLRGGTNII 229
++ +LV+KLG G++ EV+ S+ L ++
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 230 TLQAVV--KDPV-------SRTPALIFEHVNNTDFKQLYQTLTDYDIRYYLYELLKALDY 280
L AVV ++P+ ++ L F ++ K L L D+ ++ + + Y
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLK-SDEGGKVLLPKLIDFSA-----QIAEGMAY 124
Query: 281 CHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQEYNVRVASRY 330
+HRD++ NV++ E+ ++ D+GLA EY R +++
Sbjct: 125 IERKNYIHRDLRAANVLV-SESLMCKIADFGLARVIE-DNEYTAREGAKF 172
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 252 NTDFKQLYQTLTDYDIRYYLYELLKALDYCHSMGIMHRDVKPHNVMIDHENR-KLRLIDW 310
N FK+ T+ IR +L L+Y H +H D+K N+++ ++N ++ L D+
Sbjct: 145 NGTFKK--STVLQLGIR-----MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADY 197
Query: 311 GLAEFYHP 318
GL+ Y P
Sbjct: 198 GLSYRYCP 205
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 165
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 166 LD-EKFTVKVADFGLA 180
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 166
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 167 LD-EKFTVKVADFGLA 181
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 111 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 170
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 171 LD-EKFTVKVADFGLA 185
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 107 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 166
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 167 LD-EKFTVKVADFGLA 181
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 165
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 166 LD-EKFTVKVADFGLA 180
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 242 TPALIFEHVNNTDFKQLYQTLTD----YDIRYYLYELLKALDYCHSMGIMHRDVKPHNVM 297
+P ++ ++ + D + + T D+ + ++ K + + S +HRD+ N M
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 163
Query: 298 IDHENRKLRLIDWGLA 313
+D E +++ D+GLA
Sbjct: 164 LD-EKFTVKVADFGLA 178
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASRY--- 63
SM + Y +HRD+ NV++ + + ++ D+GL++ Y R A ++
Sbjct: 120 SMGMKYLEEKNFVHRDLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 64 FKGPELLADYQMYDYSLDMWSLG-CMLASMIFRKEPF 99
+ PE + +++ + D+WS G M ++ + ++P+
Sbjct: 179 WYAPECI-NFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 8 SMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQE-YNVRVASRY--- 63
SM + Y +HRD+ NV++ ++ ++ D+GL++ + Y + ++
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 64 FKGPELLADYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV--LGT--- 118
+ PE + +Y + D+WS G ++ + + G + + K +G
Sbjct: 180 WYAPECI-NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAG 238
Query: 119 --EELFEYLD---KYHIELDPRFADILGRARVY 146
E+++ ++ Y +E P FA + R R Y
Sbjct: 239 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 271
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 124 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 179 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 149 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 203
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 204 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 124 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 179 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 130 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 185 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ +++ D+GLA+ + EY+
Sbjct: 134 VQIAKG----MNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 188
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 189 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ +++ D+GLA+ + EY+
Sbjct: 158 VQIAKG----MNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 212
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 213 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 118 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 172
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 173 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 125 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 180 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 124 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 179 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ +++ D+GLA+ + EY+
Sbjct: 131 VQIAKG----MNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 185
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 186 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 126 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 181 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ +++ D+GLA+ + EY+
Sbjct: 131 VQIAKG----MNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 185
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 186 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ +++ D+GLA+ + EY+
Sbjct: 124 VQIAKG----MNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEG 178
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 179 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 127 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 182 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 131 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 185
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 186 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1 MRIATGASMALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAEFYHPGQ-EYNV-- 57
++IA G ++Y ++HRD+ NV++ + +++ D+GLA+ + EY+
Sbjct: 125 VQIAKG----MNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 58 -RVASRYFKGPELLADYQMYDYSLDMWSLGCMLAS-MIFRKEPF 99
+V ++ +L +++Y + D+WS G + M F +P+
Sbjct: 180 GKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKPY 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,800,632
Number of Sequences: 62578
Number of extensions: 638055
Number of successful extensions: 4914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 2649
length of query: 467
length of database: 14,973,337
effective HSP length: 102
effective length of query: 365
effective length of database: 8,590,381
effective search space: 3135489065
effective search space used: 3135489065
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)