BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3715
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P08879|NDKA_DROME Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd
PE=1 SV=3
Length = 153
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
MA KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S
Sbjct: 1 MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWAS 45
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+ELL++HY+DL+ +PFFPGLV YM+SGPVVPMV
Sbjct: 45 SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMV 78
>sp|Q6XI71|NDKA_DROYA Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba
GN=awd PE=2 SV=1
Length = 150
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 37/41 (90%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S
Sbjct: 2 KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWAS 42
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+ELL++HY+DL+ +PFFPGLV YM+SGPVVPMV
Sbjct: 42 SKELLEKHYADLSARPFFPGLVNYMNSGPVVPMV 75
>sp|P70011|NDKA2_XENLA Nucleoside diphosphate kinase A2 OS=Xenopus laevis PE=2 SV=1
Length = 154
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 39/45 (86%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
MA KERTF+ IKPDGVQRGL+G+IIKRFE KGF+LVAMKF+ S
Sbjct: 1 MAANKERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFLQAS 45
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S++LL+QHY DL +PF+PGLV+YM+SGPV+ MV
Sbjct: 45 SQDLLRQHYIDLKDRPFYPGLVEYMNSGPVLAMV 78
>sp|P70010|NDKA1_XENLA Nucleoside diphosphate kinase A1 OS=Xenopus laevis PE=2 SV=1
Length = 154
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
MA KERTF+ IKPDGVQRGL+G+IIKRFE KGF+LVAMKF S
Sbjct: 1 MAANKERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFQQAS 45
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S++LL+QHY DL +PF+PGLV+YMSSGPV+ MV
Sbjct: 45 SQDLLRQHYIDLKDRPFYPGLVEYMSSGPVLAMV 78
>sp|O57535|NDK_CHICK Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1
Length = 153
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 37/45 (82%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
MA ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKFV S
Sbjct: 1 MAANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHAS 45
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLKQHY DL +PF+PGLVKYM+SGPVV MV
Sbjct: 45 SEDLLKQHYIDLKDRPFYPGLVKYMNSGPVVAMV 78
>sp|Q90380|NDK_COLLI Nucleoside diphosphate kinase OS=Columba livia PE=2 SV=2
Length = 153
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
MA ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV MKFV S
Sbjct: 1 MAANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGMKFVHAS 45
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEELLKQHY DL +PF+PGLVKYM+SGP+V MV
Sbjct: 45 SEELLKQHYIDLKDRPFYPGLVKYMNSGPIVAMV 78
>sp|Q50KA8|NDKB_CANFA Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2
SV=1
Length = 152
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
+ERTF+ IKPDGVQRGLVG+I+KRFE KGF+LVAMKF+ S
Sbjct: 4 QERTFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRAS 44
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PF+PGLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYIDLKDRPFYPGLVKYMHSGPVVAMV 77
>sp|Q3T0Q4|NDKB_BOVIN Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=1 SV=1
Length = 152
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQAS 44
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEELLKQHY DL +PFFPGLVKYM+SGPVV MV
Sbjct: 44 SEELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77
>sp|Q5RFH3|NDKB_PONAB Nucleoside diphosphate kinase B OS=Pongo abelii GN=NME2 PE=2 SV=1
Length = 152
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRAS 44
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEE LKQHY+DL +PFFPGLVKYM+SGPVV MV
Sbjct: 44 SEEHLKQHYTDLKDRPFFPGLVKYMNSGPVVAMV 77
>sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1
Length = 152
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRAS 44
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEE LKQHY DL +PFFPGLVKYM+SGPVV MV
Sbjct: 44 SEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77
>sp|P22392|NDKB_HUMAN Nucleoside diphosphate kinase B OS=Homo sapiens GN=NME2 PE=1 SV=1
Length = 152
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRAS 44
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEE LKQHY DL +PFFPGLVKYM+SGPVV MV
Sbjct: 44 SEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77
>sp|P19804|NDKB_RAT Nucleoside diphosphate kinase B OS=Rattus norvegicus GN=Nme2 PE=1
SV=1
Length = 152
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRAS 44
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEE LKQHY DL +PFFPGLVKYM+SGPVV MV
Sbjct: 44 SEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMV 77
>sp|P52174|NDKA1_BOVIN Nucleoside diphosphate kinase A 1 OS=Bos taurus GN=NME1-1 PE=1
SV=3
Length = 152
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGL+G IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRAS 44
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMV 77
>sp|B0TBN6|NDK_HELMI Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1
Length = 149
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
ERT+LMIKPDGVQRGLVG II RFE KGFKLV MKF+
Sbjct: 2 ERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFL 38
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPM 177
+ E+ ++HY++ KPFF GLV Y+ SGPVV M
Sbjct: 41 TREMAEKHYAEHVGKPFFAGLVDYIISGPVVAM 73
>sp|B1XIE7|NDK_SYNP2 Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1
Length = 149
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 36/40 (90%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+M+KPDGVQRGLVG++I+RFE KGFKLV +K V VS
Sbjct: 2 ERTFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVS 41
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 RQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
R+F L KL++ S EL +QHY +PFF LV+++ S PVV MV
Sbjct: 23 RRFEAKGFKLVGLKLVS----VSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMV 74
>sp|B1I1P4|NDK_DESAP Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain
MP104C) GN=ndk PE=3 SV=1
Length = 150
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
+RTF+M+KPDGVQRGLVG +I RFE +GFKLVA+K +W+
Sbjct: 2 DRTFVMVKPDGVQRGLVGEVITRFERRGFKLVALKLLWID 41
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 148 LLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
L ++HY + KPFF LV+Y++SGPV MV
Sbjct: 44 LAERHYEEHRGKPFFDELVRYITSGPVAAMV 74
>sp|Q9WV85|NDK3_MOUSE Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3
Length = 169
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%)
Query: 1 MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWV 60
MIC VL + + + ERTFL +KPDGVQR LVG I++RFE KGFKLVA+K V
Sbjct: 1 MICLVLTIFANLFPSAYSGVNERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQA 60
Query: 61 S 61
S
Sbjct: 61 S 61
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEELL++HY +L KPF+ LVKYMSSGPVV MV
Sbjct: 61 SEELLREHYVELREKPFYSRLVKYMSSGPVVAMV 94
>sp|P52175|NDKA2_BOVIN Nucleoside diphosphate kinase A 2 OS=Bos taurus GN=NME1-2 PE=1
SV=3
Length = 152
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGL+G IIKRFE KGF+LVAMKF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMKFMRAS 44
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMV 77
>sp|Q13232|NDK3_HUMAN Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2
Length = 169
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 40/61 (65%)
Query: 1 MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWV 60
MIC VL + + ERTFL +KPDGVQR LVG I++RFE KGFKLVA+K V
Sbjct: 1 MICLVLTIFANLFPAACTGAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQA 60
Query: 61 S 61
S
Sbjct: 61 S 61
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEELL++HY++L +PF+ LVKYM+SGPVV MV
Sbjct: 61 SEELLREHYAELRERPFYGRLVKYMASGPVVAMV 94
>sp|Q05982|NDKA_RAT Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1
SV=1
Length = 152
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQAS 44
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMV 77
>sp|Q2EN76|NDKB_PIG Nucleoside diphosphate kinase B OS=Sus scrofa GN=NME2 PE=2 SV=1
Length = 152
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ +KPDGVQRGLVG IIKRFE KGF+LVA+KF+ S
Sbjct: 5 ERTFIAVKPDGVQRGLVGEIIKRFEQKGFRLVALKFLQAS 44
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEELLKQHY DL +PFFPGLVKYM SGPVV MV
Sbjct: 44 SEELLKQHYIDLKDRPFFPGLVKYMGSGPVVAMV 77
>sp|Q8YRP2|NDK_NOSS1 Nucleoside diphosphate kinase OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=ndk PE=3 SV=1
Length = 149
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTFL IKPDGVQRGLVG II+RFE KGF LV +KF+ VS
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVS 41
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+EL +QHY +PFFP LV++++SGPVV MV
Sbjct: 41 SKELAEQHYGVHRERPFFPSLVEFITSGPVVAMV 74
>sp|Q3M7K5|NDK_ANAVT Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=ndk PE=3 SV=1
Length = 149
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTFL IKPDGVQRGLVG II+RFE KGF LV +KF+ VS
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVS 41
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+EL +QHY +PFFP LV++++SGPVV MV
Sbjct: 41 SKELAEQHYGVHRERPFFPSLVEFITSGPVVAMV 74
>sp|Q9UUY8|NDK_NEUCR Nucleoside diphosphate kinase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ndk-1 PE=2 SV=2
Length = 152
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 34/38 (89%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
+E+TF+ +KPDGVQRGLVGNII RFE++GFKLVAMK
Sbjct: 4 QEQTFIAVKPDGVQRGLVGNIISRFENRGFKLVAMKLT 41
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 144 PSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
P + L++HY DL TKPFF GL+KYM+SGP+ MV
Sbjct: 43 PGQAHLEKHYEDLNTKPFFAGLIKYMNSGPICAMV 77
>sp|P15532|NDKA_MOUSE Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1
Length = 152
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQAS 44
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 29/34 (85%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY+DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYTDLKDRPFFTGLVKYMHSGPVVAMV 77
>sp|A2STK8|NDK_METLZ Nucleoside diphosphate kinase OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=ndk PE=3 SV=1
Length = 149
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKF 57
ERTF+MIKPDGVQRGLVG I+ RFE+KGFK+VA KF
Sbjct: 2 ERTFVMIKPDGVQRGLVGEILSRFENKGFKIVAGKF 37
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 142 GIPSEELLKQHYSDLATKPFFPGLVKYMSSGPV 174
G+ +E ++ +HY + KPF+PG+ Y++SGPV
Sbjct: 38 GVLAESIVDKHYEEHLAKPFYPGMKAYITSGPV 70
>sp|Q5RC56|NDKA_PONAB Nucleoside diphosphate kinase A OS=Pongo abelii GN=NME1 PE=2 SV=1
Length = 152
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQAS 44
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMV 77
>sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A OS=Homo sapiens GN=NME1 PE=1 SV=1
Length = 152
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQRGLVG IIKRFE KGF+LV +KF+ S
Sbjct: 5 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQAS 44
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMV 77
>sp|Q3IPM6|NDK_NATPD Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1
Length = 153
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+M+KPDGVQRGL+G+I+ RFED+G KLVA KF+ +
Sbjct: 5 ERTFVMVKPDGVQRGLIGDIVSRFEDRGLKLVAGKFMQID 44
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
+EL ++HY++ KPFF L ++++SGPV MV
Sbjct: 44 DDELAREHYAEHVDKPFFDELKEFITSGPVFAMV 77
>sp|O29491|NDK_ARCFU Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=ndk PE=3 SV=1
Length = 151
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+M+KPDGVQRGLVG +I R E KG K+VAMK +W++
Sbjct: 2 ERTFVMVKPDGVQRGLVGEVIGRLERKGLKIVAMKMLWIA 41
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
+ E+ + HY++ KPFF LV Y++SGPVV MV
Sbjct: 41 AREMAENHYAEHREKPFFSALVDYITSGPVVAMV 74
>sp|B2IX22|NDK_NOSP7 Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC
29133 / PCC 73102) GN=ndk PE=3 SV=1
Length = 149
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTFL IKPDGVQRGLVG II+RFE KGF LV +KF+ VS
Sbjct: 2 ERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVS 41
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+EL +QHY +PFF LV++++S PVV MV
Sbjct: 41 SKELAEQHYGVHRERPFFGSLVEFITSSPVVAMV 74
>sp|Q3AFJ7|NDK_CARHZ Nucleoside diphosphate kinase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3
SV=1
Length = 149
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+M+KPDGVQRGLVG II RFE +GFKLV +K + +S
Sbjct: 2 ERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQIS 41
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S EL + HY + KPFF GL+ +++SGPVV MV
Sbjct: 41 SRELAETHYGEHKGKPFFEGLLNFITSGPVVAMV 74
>sp|Q50KA9|NDKA_CANFA Nucleoside diphosphate kinase A OS=Canis familiaris GN=NME1 PE=2
SV=1
Length = 152
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+ IKPDGVQR LVG IIKRFE KGF+L+AMK + S
Sbjct: 5 ERTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQAS 44
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE+LLK+HY DL +PFF GLVKYM SGPVV MV
Sbjct: 44 SEDLLKEHYIDLKDRPFFAGLVKYMQSGPVVAMV 77
>sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma
cirratum PE=3 SV=1
Length = 151
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
KERTF+ +KPDGVQR +VG +IKRFE KGFKLVAMKF+
Sbjct: 3 KERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFL 40
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 29/33 (87%)
Query: 146 EELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
++LL++HY +L+ KPF+P L+KYMSSGPVV MV
Sbjct: 44 KDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMV 76
>sp|Q0W8X1|NDK_UNCMA Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon
RC-I GN=ndk PE=3 SV=1
Length = 152
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 34/41 (82%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
+ERTF+M+KPDGVQRGLVG II RFE +G K+V MK + VS
Sbjct: 4 RERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVS 44
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SEEL KQHY++ A KPFFPGLV ++ SGP V MV
Sbjct: 44 SEELAKQHYAEHAAKPFFPGLVSFIRSGPTVAMV 77
>sp|P74494|NDK_SYNY3 Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ndk PE=1 SV=1
Length = 149
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+MIKPDGVQR L+G I+ RFE KGFKLVAMK + VS
Sbjct: 2 ERTFIMIKPDGVQRQLIGEIVGRFEKKGFKLVAMKVMTVS 41
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+EL ++HY L KPFF GLV ++ S PVV MV
Sbjct: 41 SQELAEKHYEALNDKPFFSGLVNFICSSPVVAMV 74
>sp|Q5V5M1|NDK_HALMA Nucleoside diphosphate kinase OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=ndk
PE=3 SV=1
Length = 154
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+M+KPDGVQRGL+G+I+ RFED+G K+V KF+ +
Sbjct: 5 ERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQID 44
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
+EL ++HY + KPFF GLV +++SGPV MV
Sbjct: 44 DQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMV 77
>sp|Q7NMQ5|NDK_GLOVI Nucleoside diphosphate kinase OS=Gloeobacter violaceus (strain
PCC 7421) GN=ndk PE=3 SV=1
Length = 149
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVS 65
ERTF+ IKPDGVQRGLVG I++RFE +GFKLV +K + VS ++
Sbjct: 2 ERTFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALA 45
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
SE L ++HY++ +PFF GLV +++S PVV +V
Sbjct: 41 SEALAQKHYAEHKERPFFGGLVAFITSSPVVAVV 74
>sp|Q02254|NDK1_SPIOL Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1
PE=2 SV=1
Length = 148
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
E+TF+MIKPDGVQRGLVG II RFE KGF L A+KFV
Sbjct: 2 EQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFV 38
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 150 KQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
++HY+DL+ KPFF GLV+Y+ SGPVV MV
Sbjct: 46 EKHYADLSAKPFFNGLVEYIVSGPVVAMV 74
>sp|Q7Z8P9|NDK_ASPFU Nucleoside diphosphate kinase OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=ndk1 PE=3 SV=1
Length = 153
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 21 KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
E+TF+ IKPDGVQRGL+G II RFE++GFKLVAMK V
Sbjct: 3 NEQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLV 40
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 144 PSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
P + L+QHY+DL+ KPFF GLV YM SGP+ MV
Sbjct: 42 PPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMV 76
>sp|B9LPY5|NDK_HALLT Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain
ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3
SV=1
Length = 159
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
M+ ERTF+M+KPDGVQRGL+G I+ RFE++G KLV KF+ +
Sbjct: 1 MSHHDERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQID 45
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
E+L QHY + KPFF GLV +++S PV MV
Sbjct: 45 DEDLAHQHYGEHEGKPFFDGLVDFITSAPVFAMV 78
>sp|A5D5U8|NDK_PELTS Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1
Length = 149
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERT+LMIKPDGVQRGLVG II RFE +GFK+V +K + +
Sbjct: 2 ERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIG 41
Score = 37.7 bits (86), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
EL ++HY + KPFF LV Y++S PVV MV
Sbjct: 41 GRELAEKHYGEHKGKPFFEPLVGYITSSPVVAMV 74
>sp|B0JHT4|NDK_MICAN Nucleoside diphosphate kinase OS=Microcystis aeruginosa (strain
NIES-843) GN=ndk PE=3 SV=1
Length = 149
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 33/40 (82%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTFLMIKPDGVQR LVG II+RFE KGF LV +K + VS
Sbjct: 2 ERTFLMIKPDGVQRNLVGEIIQRFETKGFTLVGLKMMQVS 41
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S EL ++HY+ +PFF LV +++S PVV MV
Sbjct: 41 SSELAEKHYAVHKERPFFRSLVDFITSSPVVAMV 74
>sp|P47922|NDK1_PEA Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1
Length = 149
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCR---MVS 78
E+TF+MIKPDGVQRGLVG II RFE KGF L +KFV V F EK A S
Sbjct: 3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERA--FAEKHYADLSAKPFFS 60
Query: 79 SVPAYEISGKLLVGI--------TYSTVLGHLNLETSECPLFHIDYEL 118
+ Y ISG ++ I T ++G N SE D+ +
Sbjct: 61 GLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAI 108
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 150 KQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
++HY+DL+ KPFF GLV Y+ SGPVV M+
Sbjct: 47 EKHYADLSAKPFFSGLVDYIISGPVVAMI 75
>sp|A2BK98|NDK_HYPBU Nucleoside diphosphate kinase OS=Hyperthermus butylicus (strain
DSM 5456 / JCM 9403) GN=ndk PE=3 SV=1
Length = 142
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 20 PKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
P ERTF+MIKPDGV+RGLVG II RFE KG K+ A+K W++
Sbjct: 2 PVERTFVMIKPDGVKRGLVGEIIARFERKGLKIKALKMKWLT 43
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
+E+L + H KPFF LV +++SGPVV M+
Sbjct: 47 AEKLYEVHRG----KPFFEDLVNFVTSGPVVAMI 76
>sp|O81372|NDK1_MESCR Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum
GN=NDKP1 PE=2 SV=1
Length = 148
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFV 58
E+TF+MIKPDGVQRGLVG II RFE KGF L A+KF+
Sbjct: 2 EQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFI 38
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 150 KQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
++HY+DL+ KPFF GLV+Y+ SGPVV MV
Sbjct: 46 EKHYADLSAKPFFNGLVEYIVSGPVVAMV 74
>sp|B1WQB7|NDK_CYAA5 Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC
51142) GN=ndk PE=3 SV=1
Length = 149
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
ERTF+MIKPDGVQRGLVG +I RFE KGF LV +K + VS
Sbjct: 2 ERTFIMIKPDGVQRGLVGEVIGRFEAKGFTLVGLKLMSVS 41
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 145 SEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
S+EL ++HY +PFF LV+++ S PVV MV
Sbjct: 41 SKELAEEHYDVHKERPFFGSLVEFICSSPVVAMV 74
>sp|Q2FRE6|NDK_METHJ Nucleoside diphosphate kinase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=ndk PE=3 SV=1
Length = 149
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKF 57
ERTFLM+KPDGVQRGL+G +I RFE +GFK+VA +F
Sbjct: 2 ERTFLMVKPDGVQRGLIGEVITRFERRGFKMVASRF 37
Score = 37.0 bits (84), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 151 QHYSDLATKPFFPGLVKYMSSGPVVPMV 178
+HY++ KPFFPGL Y++SGP MV
Sbjct: 47 EHYAEHVQKPFFPGLKAYITSGPCFLMV 74
>sp|Q5N1M1|NDK_SYNP6 Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2
Length = 149
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMK 56
ERTF+ IKPDGVQRGLVG II RFE KGFKLV +K
Sbjct: 2 ERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLK 36
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 144 PSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
PS EL +QHY+ +PFF GLV++++SGP+V +V
Sbjct: 40 PSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIV 74
>sp|P50590|NDK_SYNE7 Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain
PCC 7942) GN=ndk PE=3 SV=2
Length = 149
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMK 56
ERTF+ IKPDGVQRGLVG II RFE KGFKLV +K
Sbjct: 2 ERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLK 36
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 144 PSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
PS EL +QHY+ +PFF GLV++++SGP+V +V
Sbjct: 40 PSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIV 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,544,425
Number of Sequences: 539616
Number of extensions: 2594116
Number of successful extensions: 7898
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6444
Number of HSP's gapped (non-prelim): 1457
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)