BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3716
(436 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus
GN=PSMD13 PE=1 SV=1
Length = 376
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 12/352 (3%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELYNKKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSSDEAVILCKTAIGALKLN---- 124
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+E+E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGC+
Sbjct: 125 -IGDLQVTKETIEEVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCI 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + VYN GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
++E F+ ++ W D+ ANE L QKI LLCLME+ F + QL+F EI+++A++
Sbjct: 244 NVETFQALKSAWGQQPDLAANEALLLQKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKVT 303
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLS-------KDQLAF 359
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL KD+L F
Sbjct: 304 VNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEF 355
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQP
Sbjct: 279 EMTFTRPANHRQLTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQP 338
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 339 RVLDLQQI 346
>sp|B0BN93|PSD13_RAT 26S proteasome non-ATPase regulatory subunit 13 OS=Rattus
norvegicus GN=Psmd13 PE=1 SV=1
Length = 376
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 229/343 (66%), Gaps = 5/343 (1%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLN---- 124
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 125 -IGDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
D+++F+ ++ W D+ ANE +L +KI LLCLME+ F + QL+F EI+++A++
Sbjct: 244 DVDRFQTLKSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT 303
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ +VE L++KAL++GLV+G ID+VD+ ++TWVQPRVL Q+
Sbjct: 304 VNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 51/68 (75%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + QL+F EI+++A++ + +VE L++KAL++GLV+G ID+VD+ ++TWVQP
Sbjct: 279 EMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQP 338
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 339 RVLDLQQI 346
>sp|Q9UNM6|PSD13_HUMAN 26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens
GN=PSMD13 PE=1 SV=2
Length = 376
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 231/352 (65%), Gaps = 12/352 (3%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ + P A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLN---- 124
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 125 -IGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + QL+F EI+++A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT 303
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLS-------KDQLAF 359
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL KD+L F
Sbjct: 304 VNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEF 355
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQP
Sbjct: 279 EMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQP 338
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 339 RVLDLQQI 346
>sp|Q5E964|PSD13_BOVIN 26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus
GN=PSMD13 PE=2 SV=1
Length = 376
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 231/352 (65%), Gaps = 12/352 (3%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSSDEAVILCKTAIGALKLN---- 124
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E +++++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 125 -IGDLQVTKETIEDVEEMLSNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL D V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + QL+F EI+ +A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIARSAKIT 303
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLS-------KDQLAF 359
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL KD+L F
Sbjct: 304 VNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEF 355
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + QL+F EI+ +A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQP
Sbjct: 279 EMTFTRPANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQP 338
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 339 RVLDLQQI 346
>sp|Q9WVJ2|PSD13_MOUSE 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus
GN=Psmd13 PE=1 SV=1
Length = 376
Score = 294 bits (753), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 228/343 (66%), Gaps = 5/343 (1%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLN---- 124
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 125 -IGDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
+++F+ ++ W D+ ANE +L +KI LLCLME+ F + QL+F EI+++A++
Sbjct: 244 AVDRFQTLKCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKIT 303
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ +VE L++KAL++GLV+G ID+VD+ ++TWVQPRVL Q+
Sbjct: 304 VNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 51/68 (75%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + QL+F EI+++A++ + +VE L++KAL++GLV+G ID+VD+ ++TWVQP
Sbjct: 279 EMTFTRPANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQP 338
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 339 RVLDLQQI 346
>sp|Q54NQ0|PSD13_DICDI 26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium
discoideum GN=psmD13 PE=2 SV=1
Length = 385
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 214/372 (57%), Gaps = 20/372 (5%)
Query: 22 PEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINPVS 81
P++S Q N+++ Y KLWHQLT + + +P + ++ EL + Y F+ FE K+ P+S
Sbjct: 18 PDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLS 77
Query: 82 LMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDADKPGSLDE 141
L+EI + D +E+ +++ KVK + A IL I N + + G ++
Sbjct: 78 LVEICIAVARQF-DTDESRKFIETISQKVKKDKSAY----ILTLSYIANMNL-RSGVAEQ 131
Query: 142 VEKLIDEIELLVNDIEGVTA----IHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLN 197
++ +EL +++GVT ++S FY V++ + +++ S +Y+ AL YL L
Sbjct: 132 LQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKNALMYLSYCKLE 191
Query: 198 DLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIE 257
++ +Q A+ + +AAL+ ++VY G+L+A+PIL +L+ + + WL+ L+AFN GDI+
Sbjct: 192 TISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQ 251
Query: 258 KFELMRPQW----SAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQL 313
+FE + Q S I N KL QKI++L L+ELAF+ +SF++I++A +L
Sbjct: 252 QFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKL 311
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAFKKIPGSHQLSFAEI 373
PL E+E L++K+L+L L+KG IDQ E ++TWV PR+L +Q+ S AE
Sbjct: 312 PLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQI------NSMNNRIAEW 365
Query: 374 SEAAQLPLIEVE 385
+E A+ L VE
Sbjct: 366 TEKAKTSLRLVE 377
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 329 GLVKGHIDQVDESFNVTWVQPR------VLSKDQLAFKKIPGSHQLSFAEISEAAQLPLI 382
GL+ H D + +T + +LS +LAF+ +SF++I++A +LPL
Sbjct: 255 GLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLPLG 314
Query: 383 EVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQV 423
E+E L++K+L+L L+KG IDQ E ++TWV PR+L +Q+
Sbjct: 315 EIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQI 355
>sp|Q9US13|RPN9_SCHPO Probable 26S proteasome regulatory subunit rpn9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn9 PE=3 SV=1
Length = 381
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 195/348 (56%), Gaps = 21/348 (6%)
Query: 19 SKNPE-ISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELR-DLYHKFVISFETK 76
++ PE + ++ +E+LY +KLW QLT A++ F P + LR LY FV SF
Sbjct: 18 TRAPESLQQSYILMEDLYERKLWKQLTDALIVFFDTP---ETVPLRLPLYTNFVNSFRPN 74
Query: 77 INPVSLMEIMEVITNHLSDQEEALVLLQSF-----EDKVKNNLEAKSLCKILQAQMIMNK 131
IN + + M + +EAL L E+K K+ S+ I + ++I
Sbjct: 75 INQLKAV-YMGLKAFESCSNDEALRNLNQIVNELDEEKYKDAY-VYSIVAIARIKLI--- 129
Query: 132 DADKPGSLDEVEKLIDEIELLVNDIEGVTA-IHSRFYLVASTLYRKQAKLSLYYRTALRY 190
G LDE +L+ + +++ I+ V + IHS +Y V++ Y+ +A + YYR L Y
Sbjct: 130 ----SGKLDEARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLY 185
Query: 191 LGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRA 250
L C+DL+ + ++ V+ A + +AA+L D +YN GELL HP+ + L T + WL +L+ A
Sbjct: 186 LSCIDLDKCSHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIA 244
Query: 251 FNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEA 310
N GD+ FE + Q + M ++++ L QKI L+ L+EL F+ P L+F I+ A
Sbjct: 245 MNVGDLPLFERLMGQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARA 304
Query: 311 AQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
++P EVE LI++AL++GL+ G ID+V + ++ VQ R+L+ Q+A
Sbjct: 305 TRIPSNEVELLIMRALSVGLITGVIDEVTQIVTISSVQSRILNHSQIA 352
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%)
Query: 350 RVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFN 409
R+++ +L F+ P L+F I+ A ++P EVE LI++AL++GL+ G ID+V +
Sbjct: 278 RLMALIELVFQLPPNQRTLTFDTIARATRIPSNEVELLIMRALSVGLITGVIDEVTQIVT 337
Query: 410 VTWVQPRVLSKDQV 423
++ VQ R+L+ Q+
Sbjct: 338 ISSVQSRILNHSQI 351
>sp|Q04062|RPN9_YEAST 26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN9 PE=1 SV=1
Length = 393
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 197/370 (53%), Gaps = 33/370 (8%)
Query: 8 TVYLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELR-DLY 66
T+ T + EA +P + + E+ Y +KLW QL+ ++ F + K LR LY
Sbjct: 9 TILSTLRMEA---DPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA---KSTPLRLRLY 62
Query: 67 HKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLL-------QSFEDKVKNNLEAKSL 119
FV F KIN +S+++ + D +E+L L Q + K + N +K
Sbjct: 63 DNFVSKFYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDH 122
Query: 120 --------CKILQAQMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVAS 171
+I + ++ N LD++EK +D+ + + I + FY S
Sbjct: 123 GDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP------LRITNSFYSTNS 176
Query: 172 TLYRKQAKLSLYYRTALRYLGCVDLN-DLTASDQVQHAFLIGLAALLADSVYNIGELLAH 230
++ + + +Y T+L YL ++ + +T +++ Q A+ + ++ALL D +YN GELL H
Sbjct: 177 QYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHH 236
Query: 231 PILDSLQQTPNA-WLVELLRAFNAGDIEKFE-LMRPQWSAMNDIKANENKLSQKIALLCL 288
PI++++ N WL +LL A GD +KF+ L++ Q S + + +E+ L QKI L+ L
Sbjct: 237 PIMETIVNDSNYDWLFQLLNALTVGDFDKFDSLIKVQISKIPILAQHESFLRQKICLMTL 296
Query: 289 MELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 348
+E F + LSF +IS+A LP VE L+++A++LGL+KG IDQV+E ++WVQ
Sbjct: 297 IETVF--VKNIRMLSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQ 354
Query: 349 PRVLSKDQLA 358
PR++S DQ+
Sbjct: 355 PRIISGDQIT 364
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 368 LSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQV 423
LSF +IS+A LP VE L+++A++LGL+KG IDQV+E ++WVQPR++S DQ+
Sbjct: 308 LSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQI 363
>sp|A4RK68|EIF3M_MAGO7 Eukaryotic translation initiation factor 3 subunit M OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=MGG_01595 PE=3 SV=1
Length = 432
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Query: 187 ALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVE 246
ALR D D T+ + Q A +A+ + + + ++ A P + +L ++ + +
Sbjct: 195 ALRTFDSEDAEDYTSEEAQQLALRALRSAISSPTRLSFEDIRALPAVHALSES-HPVHYQ 253
Query: 247 LLRAFNAGDIEKFELMRPQWSAMNDIKANENK-LSQKIALLCLMELAFKKIPGSHQLSFA 305
LL+ F D++ ++ R + + + +N+ L +K+ LL LA + + ++S+
Sbjct: 254 LLQIFGEQDLDDYDDFREEHEGFIEKENLDNEVLYRKMRLLTFASLAAASM-QTREISYN 312
Query: 306 EISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
I++A Q+P +VE I + GLV+G + Q + F + V+ RV + Q
Sbjct: 313 SITKALQIPSEDVEMWAIDVIRAGLVEGKLSQKKKVFLIHSVRYRVFGEKQ 363
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 332 KGHIDQVDESFNVTWVQPRVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKA 391
+G I++ + V + + R+L+ LA + + ++S+ I++A Q+P +VE I
Sbjct: 274 EGFIEKENLDNEVLYRKMRLLTFASLAAASM-QTREISYNSITKALQIPSEDVEMWAIDV 332
Query: 392 LALGLVKGHIDQVDESFNVTWVQPRVLSKDQVFW-----SLEETVAT 433
+ GLV+G + Q + F + V+ RV + Q W SLE+T T
Sbjct: 333 IRAGLVEGKLSQKKKVFLIHSVRYRVFGEKQ--WRQLASSLEKTKKT 377
>sp|A1CD85|EIF3M_ASPCL Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_005680 PE=3 SV=1
Length = 471
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---LMRPQWSAMN 270
+AL + +V++ L A + +L+ T ++ L ELL F A ++ +E P S
Sbjct: 241 SALKSPAVFDFTSLTAADAIQALR-TSDSSLFELLEIFTADTLDAYEDFVAATPLASISG 299
Query: 271 DIKANENK-LSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALG 329
+ A+ + L K+ LL L +A S L +A I+ A ++P +VE +I + G
Sbjct: 300 GVLADAGEALQNKLRLLTLASIAASA--PSRSLPYATIASALRVPTEDVEKWVIDTIRAG 357
Query: 330 LVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
LV+G + Q+ F V RV + Q A
Sbjct: 358 LVEGKLSQLRSEFLVHRATYRVFGEKQWA 386
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L +A I+ A ++P +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 327 SRSLPYATIASALRVPTEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 384
>sp|Q7SEK1|EIF3M_NEUCR Eukaryotic translation initiation factor 3 subunit M OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=NCU02813 PE=3 SV=1
Length = 434
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 195 DLNDLTASDQVQHAFLIGLA-ALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNA 253
D D ASD+ Q L L A+ + + ++ +L + P + +L + + +LL F
Sbjct: 197 DNQDEVASDEAQKLSLRALRMAISSPTRFDFNDLRSLPSVHALSDSHPVY-SQLLDIFTE 255
Query: 254 GDIEKFELMRPQWSA-MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQ 312
D+E + R + + + K + KL +K+ LL LA P + ++ +A I++A Q
Sbjct: 256 QDLEDYNDFRDEHQGWIENEKLDHEKLQRKMRLLTFASLA-ASTP-NREIPYASIAKALQ 313
Query: 313 LPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
+P +VE I + LV+G + Q + F V RV + Q
Sbjct: 314 IPDEDVEMWTIDVIRSKLVEGRLSQKQKVFLVHRTTYRVFGEKQ 357
>sp|Q0CPV5|EIF3M_ASPTN Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_04279
PE=3 SV=1
Length = 461
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 187 ALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVE 246
AL+ + D + A D A +AL +V++ L A + +L+ T ++ L E
Sbjct: 216 ALQTIPAADASKKEARDLAVRALT---SALSHPAVFDFTPLTASDAVQALR-TSDSTLFE 271
Query: 247 LLRAFNAGDIEKFELM---RPQWSAMNDIKANE-NKLSQKIALLCLMELAFKKIPGSHQL 302
LL F A ++ +E P S + A + L K+ LL L LA S L
Sbjct: 272 LLEIFTADTLDAYEAFVAATPLASISGGVLAPAADALQNKMRLLTLASLAAST--PSRSL 329
Query: 303 SFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
+A I+ A ++P +VE +I + GLV+G + Q+ F V RV + Q A
Sbjct: 330 PYATIASALRVPAEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWA 385
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L +A I+ A ++P +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 326 SRSLPYATIASALRVPAEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 383
>sp|A1DC62|EIF3M_NEOFI Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_024940 PE=3 SV=1
Length = 468
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---LMRPQWSAMN 270
+AL + V++ L A + +L+ + ++ L ELL F A ++ +E P +
Sbjct: 241 SALKSPGVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLETISG 299
Query: 271 DIKAN-ENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALG 329
+ A+ L K+ LL L LA P S L +A I+ A ++P+ +VE +I + G
Sbjct: 300 GVLADGAEALQTKMRLLTLASLA-ASTP-SRSLPYATIASALRVPVEDVEKWVIDTIRAG 357
Query: 330 LVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
LV+G + Q+ F V RV + Q A
Sbjct: 358 LVEGKLSQLRSEFLVHRATYRVFGEKQWA 386
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L +A I+ A ++P+ +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 327 SRSLPYATIASALRVPVEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 384
>sp|Q1DQB2|EIF3M_COCIM Eukaryotic translation initiation factor 3 subunit M
OS=Coccidioides immitis (strain RS) GN=CIMG_07501 PE=3
SV=1
Length = 465
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 165 RFYLVASTLYRKQAKLSLYYRTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNI 224
+ +L + +K + Y + L + ++ ++++ + A ++AL V++
Sbjct: 200 KLHLAVADAAKKAGDEEMSYNHVILALQAIPPSEASSNEARELAVRALISALTYPFVFDF 259
Query: 225 GELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE--LMRPQWSAMNDIKANENKLSQK 282
L + + +L+ + L ELL F + ++ +E + S+M+++ + L K
Sbjct: 260 TPLTSSDAIQNLRSAEPS-LFELLEIFASDTLDAYEEFIKSTPLSSMHNLAESAEILQNK 318
Query: 283 IALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESF 342
+ +L L LA S L + IS A ++P +VE +I + GLV+G + Q+ F
Sbjct: 319 MRVLTLASLAAST--PSRSLPYDSISNALRIPREDVEKWVIDTIRAGLVEGKLSQLKGEF 376
Query: 343 NVTWVQPRVLSKDQLA 358
V RV + Q A
Sbjct: 377 LVHRATYRVFGERQWA 392
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 350 RVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFN 409
RVL+ LA S L + IS A ++P +VE +I + GLV+G + Q+ F
Sbjct: 320 RVLTLASLAAST--PSRSLPYDSISNALRIPREDVEKWVIDTIRAGLVEGKLSQLKGEFL 377
Query: 410 VTWVQPRVLSKDQ 422
V RV + Q
Sbjct: 378 VHRATYRVFGERQ 390
>sp|Q2UDZ9|EIF3M_ASPOR Eukaryotic translation initiation factor 3 subunit M OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000816
PE=3 SV=1
Length = 466
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELM---RPQWSAMN 270
+AL +V++ L A + +L+ + ++ L ELL F A ++ +E P
Sbjct: 242 SALTHPAVFDFTPLTASDAVQALRSS-DSTLFELLEIFTADTLDAYEAFVTATPLAGISG 300
Query: 271 DIKANENK-LSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALG 329
+ A+ + L K+ LL L LA P S L +A I+ + ++P +VE +I + G
Sbjct: 301 GVLADAGEALQNKMRLLTLASLA-ASTP-SRSLPYATIAASLRVPAEDVEKWVIDTIRAG 358
Query: 330 LVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
LV+G + Q+ F V RV + Q A
Sbjct: 359 LVEGKLSQLRSEFLVHRATYRVFGEKQWA 387
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L +A I+ + ++P +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 328 SRSLPYATIAASLRVPAEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 385
>sp|Q6CB51|EIF3M_YARLI Eukaryotic translation initiation factor 3 subunit M OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=YALI0C21890g
PE=3 SV=1
Length = 400
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 215 ALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMRPQWSAMNDIKA 274
AL +D VY+ G +LA ++ L+ T L ELL +G++ K + + A D K+
Sbjct: 223 ALKSDHVYDFGSILALEPVEDLKTTEQR-LFELLTTVASGEVAKMQSL-----AAGDAKS 276
Query: 275 --NENKLSQKIALLCLMELAFKKIPG-SHQLSFAEISEAAQLPLIEVEFLIIKALALGLV 331
EN + L +A + S ++ ++ I++ + L VE +I + GLV
Sbjct: 277 LIEENDFDAESLLAKTRVIALANLAAESPEIEYSIIAKNLDVSLDTVELWVIDTIRAGLV 336
Query: 332 KGHIDQVDESFNVTWVQ 348
+G + Q +SF V Q
Sbjct: 337 EGRLSQTKQSFAVHRAQ 353
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 323 IKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLI 382
+++LA G K I++ D + RV++ LA + S ++ ++ I++ + L
Sbjct: 266 MQSLAAGDAKSLIEENDFDAESLLAKTRVIALANLAAE----SPEIEYSIIAKNLDVSLD 321
Query: 383 EVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
VE +I + GLV+G + Q +SF V Q
Sbjct: 322 TVELWVIDTIRAGLVEGRLSQTKQSFAVHRAQ 353
>sp|Q4WG69|EIF3M_ASPFU Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_7G03980 PE=3 SV=1
Length = 468
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---LMRPQWSAMN 270
+AL + +V++ L A + +L+ + ++ L ELL F A ++ +E P +
Sbjct: 241 SALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLETISG 299
Query: 271 DIKAN-ENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALG 329
+ + L K+ LL L LA P S L + I+ A ++P+ +VE +I + G
Sbjct: 300 GVLVDGAEALQTKMRLLTLASLA-ASTP-SRSLPYTTIASALRVPVEDVEKWVIDTIRAG 357
Query: 330 LVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
LV+G + Q+ F V RV + Q A
Sbjct: 358 LVEGKLSQLRSEFLVHRATYRVFGEKQWA 386
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L + I+ A ++P+ +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 327 SRSLPYTTIASALRVPVEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 384
>sp|B0YCA6|EIF3M_ASPFC Eukaryotic translation initiation factor 3 subunit M OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_089510 PE=3 SV=1
Length = 468
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---LMRPQWSAMN 270
+AL + +V++ L A + +L+ + ++ L ELL F A ++ +E P +
Sbjct: 241 SALKSPAVFDFTSLTAADAIQALRSS-DSTLFELLEIFTADTLDAYEDFIAATPLETISG 299
Query: 271 DIKAN-ENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALG 329
+ + L K+ LL L LA P S L + I+ A ++P+ +VE +I + G
Sbjct: 300 GVLVDGAEALQTKMRLLTLASLA-ASTP-SRSLPYTTIASALRVPVEDVEKWVIDTIRAG 357
Query: 330 LVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
LV+G + Q+ F V RV + Q A
Sbjct: 358 LVEGKLSQLRSEFLVHRATYRVFGEKQWA 386
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
S L + I+ A ++P+ +VE +I + GLV+G + Q+ F V RV + Q
Sbjct: 327 SRSLPYTTIASALRVPVEDVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 384
>sp|Q54KZ8|EIF3M_DICDI Eukaryotic translation initiation factor 3 subunit M
OS=Dictyostelium discoideum GN=eif3m PE=1 SV=1
Length = 401
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 133 ADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLG 192
A +L+ V+ I +I+ + D + Y + S +++++ ++ L ++ ++YL
Sbjct: 143 ASDSNNLEFVKYQITDIDSWLEDWNVSIQQKRKLYKLISNIFKEKQRM-LSHQFLVKYLQ 201
Query: 193 CVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTP---NAWLVELLR 249
D + + + A + + ++ +Y LL P + L+ + N+ EL++
Sbjct: 202 TFTKED--SQEAQEDAVRVCIESISLQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMK 259
Query: 250 AFNAGDIEKF-ELMRPQWSAMNDIKANENKLSQKIALLCLMELAFK--KIPGSHQLSFAE 306
F ++ F + + + ++ I + + QKI LL L L + K+P ++
Sbjct: 260 IFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRLLSLATLTSEQSKVP------YSL 313
Query: 307 ISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
IS+ Q+ EVE +I A+ L+ +DQ++ NV RV +K Q
Sbjct: 314 ISKMLQIDENEVEMWVINAMEGDLLDAKLDQLNRIVNVNSSTQRVFNKSQ 363
>sp|Q5DHT6|EIF3M_SCHJA Eukaryotic translation initiation factor 3 subunit M OS=Schistosoma
japonicum GN=SJCHGC06559 PE=2 SV=1
Length = 384
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 197 NDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDI 256
N++TA + Q+A ++ L + + +L A + L+ P + + + F +GD+
Sbjct: 200 NEVTAVNARQNAIKCIISVLQDPCLLSHDQLYALKPVQYLEGEP---VHDFFKIFVSGDL 256
Query: 257 EKFE---LMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQL 313
F+ P + + N++ +E K+ LL LM+L+ ++LS+ E + L
Sbjct: 257 NTFKNFLAKHPNFLSHNNL--SEEACVHKLRLLTLMQLS----ENVNELSYHEAATQLGL 310
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
+ E+E II+A+ V +DQV + +T PR + Q
Sbjct: 311 KIEELEPFIIEAVRQRAVACKLDQVQKKILITGAFPRTFGRPQ 353
>sp|Q94JU3|CSN7_ARATH COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7
PE=1 SV=1
Length = 260
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 220 SVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMRPQWSAMNDIKANENKL 279
S++ E+LA P + L+ T ++ ++LLR F G W D K N +L
Sbjct: 38 SLFAFSEILALPNVAQLEGTTDSVYLDLLRLFAHG----------TWG---DYKCNATRL 84
Query: 280 SQ-------KIALLCLMELA--FKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGL 330
K+ L ++ LA K +P + ++S +L +FLI + + G+
Sbjct: 85 PHLSPDQILKLKQLTVLTLAESNKVLPYDTLMVELDVSNVRELE----DFLINECMYAGI 140
Query: 331 VKGHIDQVDESFNVTWVQPRVLSKDQLA 358
V+G +DQ+ F V + R L QL
Sbjct: 141 VRGKLDQLKRCFEVPFAAGRDLRPGQLG 168
>sp|Q0UXJ7|EIF3M_PHANO Eukaryotic translation initiation factor 3 subunit M
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=SNOG_03517 PE=3 SV=2
Length = 441
Score = 39.3 bits (90), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 228 LAHPI---------LDSLQQTPNA--WLVELLRAFNAG---DIEKFELMRPQWSAMNDIK 273
L HP LDS+Q N+ +LL FN+ D F+ W + +
Sbjct: 233 LTHPTHFDFQDLTDLDSIQALRNSDPIFFQLLEIFNSDLLDDYNDFKDEHDGWVEESGLD 292
Query: 274 ANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKG 333
L++K+ LL L +A + L + +I++A Q+ EVE +I + GLV+G
Sbjct: 293 GA--ALNRKMRLLTLASMA-ASAGQTRSLPYDKIAKALQISSEEVEMWVIDVIRAGLVEG 349
Query: 334 HIDQVDESFNVTWVQPRVLSKDQ 356
+ Q++++F + RV +Q
Sbjct: 350 KLSQLNQTFLIHRSTYRVFGDNQ 372
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
+ L + +I++A Q+ EVE +I + GLV+G + Q++++F + RV +Q
Sbjct: 315 TRSLPYDKIAKALQISSEEVEMWVIDVIRAGLVEGKLSQLNQTFLIHRSTYRVFGDNQ 372
>sp|Q09722|EIF3M_SCHPO Eukaryotic translation initiation factor 3 subunit M
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=eif3m PE=1 SV=2
Length = 402
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 273 KANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVK 332
K +E+ +++K+ LL + LA + P ++ LS+ +++++ ++ EVE II + GLV+
Sbjct: 273 KFDEDAIARKMKLLTIASLA-TQAP-NNTLSYGDVAKSLKIDENEVELWIIDVIRAGLVE 330
Query: 333 GHIDQVDESFNVTWVQPRVLSKDQ 356
G + Q+ ++ ++ RV K +
Sbjct: 331 GRMSQLTKTLSIHRSSYRVFGKHE 354
>sp|Q5B5C1|EIF3M_EMENI Eukaryotic translation initiation factor 3 subunit M OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=AN4259 PE=3 SV=1
Length = 459
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---------LMRP 264
+AL +V++ L A + +L+ + +A L ELL F A ++ +E + P
Sbjct: 241 SALTHPAVFDFTPLTAADAVQALRSS-DAPLFELLEIFTADTLDAYEDFISATPVENILP 299
Query: 265 QWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIK 324
+ +A + K+ P + LS+ I+ A ++P EVE +I
Sbjct: 300 DNALAPHAEALQTKIRLLTLASLAAAATTTTGPSARSLSYETIASALRVPQEEVEKWVID 359
Query: 325 ALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
+ GLV+G + Q+ F V RV + Q A
Sbjct: 360 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWA 393
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 363 PGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 422
P + LS+ I+ A ++P EVE +I + GLV+G + Q+ F V RV + Q
Sbjct: 332 PSARSLSYETIASALRVPQEEVEKWVIDTIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQ 391
>sp|Q2HE94|EIF3M_CHAGB Eukaryotic translation initiation factor 3 subunit M OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=CHGG_01460 PE=3 SV=2
Length = 426
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 273 KANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVK 332
K + KL +K+ LL LA P + ++ +A I++A Q+P EVE I + LV+
Sbjct: 276 KLDNEKLQRKMRLLTFASLA-ASTP-NREIPYANIAKALQIPSEEVEMWTIDVVRAKLVE 333
Query: 333 GHIDQVDESFNVTWVQPRVLSKDQ 356
G + Q + F V RV + Q
Sbjct: 334 GRLSQQQKVFLVHRTTYRVFGEKQ 357
>sp|A7SPX9|EIF3M_NEMVE Eukaryotic translation initiation factor 3 subunit M
OS=Nematostella vectensis GN=v1g192238 PE=3 SV=1
Length = 379
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 236 LQQTPNAWLVELLRAFNAGDIEKFE-LMRPQWSAMNDIKANENKLSQKIALLCLMELAFK 294
LQ P + +LL+ F +GD++ ++ +N I + +K+ +L LM + +
Sbjct: 234 LQGDP---IYQLLQIFVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMRVLTLMSIGKE 290
Query: 295 KIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSK 354
+ ++S+ +++ + E+E +I+A+ GLVK +DQV ++ V R
Sbjct: 291 ----TDEISYEDLATKLGISSDEIEQFLIEAIQTGLVKARLDQVHRKVIISSVAQRTFGI 346
Query: 355 DQ 356
+Q
Sbjct: 347 NQ 348
>sp|Q9V4S8|CSN7_DROME COP9 signalosome complex subunit 7 OS=Drosophila melanogaster
GN=CSN7 PE=1 SV=2
Length = 278
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Query: 215 ALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMRPQWSAMNDIKA 274
AL A +V+ GELLA P + L+ P++ E L F G +++ ++ +
Sbjct: 42 ALEAPNVFVFGELLAEPSVLQLKDGPDSKHFETLNLFAYGTYKEYRAQPEKFIELTPA-- 99
Query: 275 NENKLSQKIALLCLMELAF--KKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVK 332
+ +K+ L ++ LA K IP + LS EI L E +II+A+ ++
Sbjct: 100 ----MQKKLQHLTIVSLAIKAKSIPYALLLSELEIDNVRHL-----EDIIIEAIYADIIH 150
Query: 333 GHIDQVDESFNVTWVQPR 350
G + Q V + Q R
Sbjct: 151 GKLFQNTRILEVDYAQGR 168
>sp|B3NRC6|EIF3M_DROER Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
erecta GN=Tango7 PE=3 SV=1
Length = 387
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 269 MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALAL 328
+N N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L
Sbjct: 264 VNSQGLNHEQNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKT 319
Query: 329 GLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
LV+ +DQ + ++T R Q
Sbjct: 320 KLVRARLDQANHKVHITSTMHRTFGAPQ 347
>sp|B4P6M6|EIF3M_DROYA Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
yakuba GN=Tango7 PE=2 SV=1
Length = 387
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 269 MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALAL 328
+N N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L
Sbjct: 264 VNSQGLNHEQNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKT 319
Query: 329 GLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
LV+ +DQ + ++T R Q
Sbjct: 320 KLVRARLDQANHKVHITSTMHRTFGAPQ 347
>sp|Q4PEV8|EIF3M_USTMA Eukaryotic translation initiation factor 3 subunit M OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=UM01355 PE=3 SV=1
Length = 441
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 365 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQVF 424
S +S+A I++ + +VE +I + GLV G + QV+++F V R K+Q +
Sbjct: 341 SADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFRVYKSTHRQFGKEQ-W 399
Query: 425 WSLEE 429
SLE+
Sbjct: 400 QSLEQ 404
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 299 SHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
S +S+A I++ + +VE +I + GLV G + QV+++F V R K+Q
Sbjct: 341 SADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFRVYKSTHRQFGKEQ 398
>sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1
SV=1
Length = 264
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 216 LLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMR---PQWSAMNDI 272
L A VY GELL + L + NA ++LL F G + + P+ S
Sbjct: 35 LEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELST---- 90
Query: 273 KANENKLSQKIALLCLMELA--FKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGL 330
A +NKL L ++ LA K IP S L E+ L E+E LII+A+ +
Sbjct: 91 -AQQNKLKH----LTIVSLASRMKCIPYSVLLKDLEMRN-----LRELEDLIIEAVYTDI 140
Query: 331 VKGHIDQVDESFNVTWVQPRVLSK 354
++G +DQ ++ V + R + K
Sbjct: 141 IQGKLDQRNQLLEVDFCIGRDIRK 164
>sp|Q2KI56|CSN7B_BOVIN COP9 signalosome complex subunit 7b OS=Bos taurus GN=COPS7B PE=2
SV=1
Length = 264
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 216 LLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMR---PQWSAMNDI 272
L A VY GELL + L + NA ++LL F G + + P+ S
Sbjct: 35 LEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELST---- 90
Query: 273 KANENKLSQKIALLCLMELA--FKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGL 330
A +NKL L ++ LA K IP S L E+ L E+E LII+A+ +
Sbjct: 91 -AQQNKLKH----LTIVSLASRMKCIPYSVLLKDLEMRN-----LRELEDLIIEAVYTDI 140
Query: 331 VKGHIDQVDESFNVTWVQPRVLSK 354
++G +DQ ++ V + R + K
Sbjct: 141 IQGKLDQRNQLLEVDFCIGRDIRK 164
>sp|B4QFD2|EIF3M_DROSI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
simulans GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 269 MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALAL 328
+N N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L
Sbjct: 264 VNSQGLNHEQNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKT 319
Query: 329 GLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
LV+ +DQ ++ +++ R Q
Sbjct: 320 KLVRARLDQANQKVHISSTMHRTFGAPQ 347
>sp|B4HR14|EIF3M_DROSE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
sechellia GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 269 MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALAL 328
+N N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L
Sbjct: 264 VNSQGLNHEQNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKT 319
Query: 329 GLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
LV+ +DQ ++ +++ R Q
Sbjct: 320 KLVRARLDQANQKVHISSTMHRTFGAPQ 347
>sp|Q7JVI3|EIF3M_DROME Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
melanogaster GN=Tango7 PE=2 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 269 MNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALAL 328
+N N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L
Sbjct: 264 VNSQGLNHEQNMKKMRLLTFMQLA----ESSPEMTFETLTKELQINEDEVEPFVIEVLKT 319
Query: 329 GLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
LV+ +DQ ++ +++ R Q
Sbjct: 320 KLVRARLDQANQKVHISSTMHRTFGAPQ 347
>sp|Q8BV13|CSN7B_MOUSE COP9 signalosome complex subunit 7b OS=Mus musculus GN=Cops7b PE=1
SV=1
Length = 264
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 216 LLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMR---PQWSAMNDI 272
L A VY GELL + L + NA ++LL F G + + P+ S
Sbjct: 35 LEAPGVYVFGELLELANVQELAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSV---- 90
Query: 273 KANENKLSQKIALLCLMELA--FKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGL 330
A +NKL L ++ LA K IP S L E+ L E+E LII+A+ +
Sbjct: 91 -AQQNKLKH----LTIVSLASRMKCIPYSVLLKDLEMRN-----LRELEDLIIEAVYTDI 140
Query: 331 VKGHIDQVDESFNVTWVQPRVLSK 354
++G +DQ ++ V + R + K
Sbjct: 141 IQGKLDQRNQLLEVDFCIGRDIRK 164
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 275 NENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGH 334
N + +K+ LL M+LA S +++F +++ Q+ EVE +I+ L LV+
Sbjct: 270 NHEQNMKKMRLLTFMQLA----ESSPEMTFDTLTKELQITEDEVEPFVIEVLKTKLVRAR 325
Query: 335 IDQVDESFNVTWVQPRVLSKDQ 356
+DQ + +++ R Q
Sbjct: 326 LDQANRKVHISSTMHRTFGAPQ 347
>sp|A0RJ87|LON_BACAH Lon protease OS=Bacillus thuringiensis (strain Al Hakam) GN=lon
PE=3 SV=1
Length = 794
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 44 TLAVLAFVQNPAIQKEGELRDLYHKFVISFETK-----INPVSLMEIMEVITNHLSDQEE 98
T A +A V+ P G L DL + +TK + +S+ E + + + + D++E
Sbjct: 170 TFATVADVEEP-----GRLADLIASH-LPIKTKQKQEILEIISVKERLHTLISIIQDEQE 223
Query: 99 ALVLLQSFEDKVKNNLEAKSLCKILQAQM--IMNKDADKPGSLDEVEKLIDEIE 150
L L + KVK ++E L+ QM I + DK G EVE+L ++IE
Sbjct: 224 LLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEELREKIE 277
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 275 NENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGH 334
N + +K+ LL M+LA + ++SF +++ Q+ EVE +I+ L LV+
Sbjct: 270 NHEQNMKKMRLLTFMQLA----ESNAEMSFEALTKELQITENEVEPFVIEVLKTKLVRAR 325
Query: 335 IDQVDESFNVTWVQPRVLSKDQ 356
+DQ + +++ R Q
Sbjct: 326 LDQANRKVHISSTMHRTFGAPQ 347
>sp|Q7Q068|EIF3M_ANOGA Eukaryotic translation initiation factor 3 subunit M OS=Anopheles
gambiae GN=AGAP012281 PE=3 SV=2
Length = 385
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 281 QKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDE 340
+K+ LL M+LA + +++F ++ + Q+ EVE II+ L LV+ +DQ
Sbjct: 278 KKMRLLSFMQLA----ESNSEMTFQQLQDELQIKEEEVEPFIIEVLKTKLVRARMDQRAR 333
Query: 341 SFNVTWVQPRVLSKDQ 356
+++ R + Q
Sbjct: 334 KVHISSTMHRTFGRPQ 349
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 275 NENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGH 334
N ++ +K+ LL M+LA + P ++SF +++ Q+ EVE +I+ L LV+
Sbjct: 270 NHDQNMKKMRLLTFMQLA-ESYP---EMSFDTLTKELQINDDEVEPFVIEVLKTKLVRAR 325
Query: 335 IDQVDESFNVTWVQPRVLSKDQ 356
+DQ + +++ R Q
Sbjct: 326 LDQANRKVHISSTMHRTFGAPQ 347
>sp|B0WTN3|EIF3M_CULQU Eukaryotic translation initiation factor 3 subunit M OS=Culex
quinquefasciatus GN=CPIJ010525 PE=3 SV=1
Length = 386
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 281 QKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDE 340
+K+ LL M+LA + +++FA++ + Q+ +VE II+ L LV+ +DQ
Sbjct: 279 KKMRLLSFMQLA----ESNPEMTFAQLQDELQIGENDVEPFIIEVLKTKLVRARMDQKAR 334
Query: 341 SFNVTWVQPRVLSKDQ 356
+++ R + Q
Sbjct: 335 KVHISSTMHRTFGRPQ 350
>sp|Q5VVC0|CA146_HUMAN Uncharacterized protein C1orf146 OS=Homo sapiens GN=C1orf146 PE=2
SV=1
Length = 180
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 29/145 (20%)
Query: 139 LDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLND 198
+D E L+ E+ + IE IH +LV S + L +R R+LGC +L
Sbjct: 60 MDTKECLLSTEEIFLAKIEKFINIHQNSFLVLSAALHGPEEWKLMFRIQQRFLGC-NLRI 118
Query: 199 LTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQ---TPNAWLVELLRAFNAGD 255
L + V I L +A + + P +DS+ T A+++E
Sbjct: 119 LPVHNTVN---AINLMCTIAKTT-------SKPYIDSICYRMITAKAYIIE--------- 159
Query: 256 IEKFELMRPQWSAMNDIKANENKLS 280
P W + IK N + ++
Sbjct: 160 ------QSPVWKTLQKIKLNSDSVN 178
>sp|Q292F0|EIF3M_DROPS Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
pseudoobscura pseudoobscura GN=Tango7 PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 275 NENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGH 334
N + +K+ LL M+LA + +++F +++ Q+ EVE +I+ L LV+
Sbjct: 270 NHEQNMKKMRLLTFMQLA----ESNPEMTFDTLTKELQITEDEVEPFVIQVLKTKLVRAR 325
Query: 335 IDQVDESFNVTWVQPRVLSKDQ 356
+DQ + +++ R Q
Sbjct: 326 LDQANRKVHISSTMHRTFGAPQ 347
>sp|B4GDM5|EIF3M_DROPE Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
persimilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 275 NENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGH 334
N + +K+ LL M+LA + +++F +++ Q+ EVE +I+ L LV+
Sbjct: 270 NHEQNMKKMRLLTFMQLA----ESNPEMTFDTLTKELQITEDEVEPFVIQVLKTKLVRAR 325
Query: 335 IDQVDESFNVTWVQPRVLSKDQ 356
+DQ + +++ R Q
Sbjct: 326 LDQANRKVHISSTMHRTFGAPQ 347
>sp|Q17D30|EIF3M_AEDAE Eukaryotic translation initiation factor 3 subunit M OS=Aedes
aegypti GN=AAEL004347 PE=3 SV=1
Length = 386
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 281 QKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDE 340
+K+ LL M+LA + +++F ++ + Q+ EVE II+ L LV+ +DQ
Sbjct: 279 KKMRLLSFMQLA----ESNPEMTFQQLQDELQIGENEVEPFIIEVLKTKLVRARMDQKAR 334
Query: 341 SFNVTWVQPRVLSKDQ 356
+++ R + Q
Sbjct: 335 KVHISSTMHRTFGRPQ 350
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,384,757
Number of Sequences: 539616
Number of extensions: 5951060
Number of successful extensions: 17086
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 16994
Number of HSP's gapped (non-prelim): 127
length of query: 436
length of database: 191,569,459
effective HSP length: 120
effective length of query: 316
effective length of database: 126,815,539
effective search space: 40073710324
effective search space used: 40073710324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)