Your job contains 1 sequence.
>psy3716
MSTIVDPTVYLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEG
ELRDLYHKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLC
KILQAQMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKL
SLYYRTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTP
NAWLVELLRAFNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH
QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAFK
KIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSK
DQVFWSLEETVATEVL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3716
(436 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1004 - symbol:psmd13 "proteasome (pr... 812 6.6e-81 1
FB|FBgn0028691 - symbol:Rpn9 "Regulatory particle non-ATP... 803 6.0e-80 1
UNIPROTKB|P84169 - symbol:PSMD13 "26S proteasome non-ATPa... 800 1.2e-79 1
UNIPROTKB|E2R5N5 - symbol:PSMD13 "Uncharacterized protein... 794 5.4e-79 1
UNIPROTKB|Q5E964 - symbol:PSMD13 "26S proteasome non-ATPa... 790 1.4e-78 1
RGD|1305236 - symbol:Psmd13 "proteasome (prosome, macropa... 790 1.4e-78 1
UNIPROTKB|Q9UNM6 - symbol:PSMD13 "26S proteasome non-ATPa... 789 1.8e-78 1
UNIPROTKB|F1RGC9 - symbol:PSMD13 "Uncharacterized protein... 788 2.3e-78 1
MGI|MGI:1345192 - symbol:Psmd13 "proteasome (prosome, mac... 780 1.6e-77 1
UNIPROTKB|G8JKV6 - symbol:PSMD13 "26S proteasome non-ATPa... 733 1.6e-72 1
WB|WBGene00004465 - symbol:rpn-9 species:6239 "Caenorhabd... 631 1.0e-61 1
UNIPROTKB|Q22253 - symbol:rpn-9 "Protein RPN-9" species:6... 631 1.0e-61 1
ASPGD|ASPL0000013342 - symbol:AN3716 species:162425 "Emer... 573 1.4e-55 1
DICTYBASE|DDB_G0285105 - symbol:psmD13 "26S proteasome no... 552 2.4e-53 1
TAIR|locus:2171998 - symbol:AT5G45620 "AT5G45620" species... 524 2.2e-50 1
TAIR|locus:504955552 - symbol:AT4G19006 "AT4G19006" speci... 522 3.6e-50 1
UNIPROTKB|G4N7S1 - symbol:MGG_03524 "26S proteasome regul... 509 8.5e-49 1
UNIPROTKB|E1C2R6 - symbol:E1C2R6 "Uncharacterized protein... 494 3.3e-47 1
POMBASE|SPAC607.05 - symbol:rpn9 "19S proteasome regulato... 466 3.1e-44 1
SGD|S000002835 - symbol:RPN9 "Non-ATPase regulatory subun... 440 1.7e-41 1
GENEDB_PFALCIPARUM|PF10_0298 - symbol:PF10_0298 "26S prot... 386 9.2e-36 1
UNIPROTKB|Q8IJA0 - symbol:PF10_0298 "26S proteasome subun... 386 9.2e-36 1
CGD|CAL0002740 - symbol:orf19.1993 species:5476 "Candida ... 256 3.8e-30 2
DICTYBASE|DDB_G0287005 - symbol:DDB_G0287005 "proteasome ... 133 1.0e-05 1
UNIPROTKB|A4RK68 - symbol:MGG_01595 "Eukaryotic translati... 129 3.2e-05 1
ASPGD|ASPL0000017804 - symbol:AN4259 species:162425 "Emer... 120 0.00034 1
>ZFIN|ZDB-GENE-040426-1004 [details] [associations]
symbol:psmd13 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 13" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1004 GO:GO:0000502 HOGENOM:HOG000216633
HOVERGEN:HBG053740 EMBL:AY398402 IPI:IPI00497953 UniGene:Dr.25959
STRING:Q6TGV4 PRIDE:Q6TGV4 ArrayExpress:Q6TGV4 Bgee:Q6TGV4
Uniprot:Q6TGV4
Length = 413
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 156/344 (45%), Positives = 234/344 (68%)
Query: 14 KQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISF 73
+Q++ S PEI+A+W +LE+ YN+KLWHQLTL + FVQ+P K L LY F+ F
Sbjct: 45 QQQSQSPTPEIAAEWHSLEDFYNRKLWHQLTLKLTVFVQDPYFAKGDGLIQLYENFLCDF 104
Query: 74 ETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDA 133
E +INP+SL+EI+ + + D A+ L+ ++KVK + EA LCK + ++ +
Sbjct: 105 EHRINPLSLVEIILHVARQMQDPNTAITFLEKTKEKVKASDEAVILCKTSIGSLKLDI-S 163
Query: 134 DKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGC 193
D P + +KLI+E+E ++N++ GVT++H RFY ++S YR +LYY+ ALRYLGC
Sbjct: 164 DLPAT----KKLIEEVEEMLNNLPGVTSVHGRFYDLSSKYYRIIGNHALYYKDALRYLGC 219
Query: 194 VDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNA 253
V+ DL ++Q + AF +GLA LL + VYN GELL HP+L+SL+ T WL++ L AFNA
Sbjct: 220 VEAKDLPEAEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRNTDKQWLIDTLFAFNA 279
Query: 254 GDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQL 313
G++EKF+ ++ W D+ A E KL QKI LLC+ME+ F + + QLSF EI+++A++
Sbjct: 280 GNVEKFQALKTAWGQQPDLAAQEAKLMQKIQLLCVMEMTFTRPANNRQLSFQEIAQSAKI 339
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GL+KG ID+V++ ++TWVQPRVL Q+
Sbjct: 340 QVNEVELLVMKALSVGLIKGSIDEVEKKVHMTWVQPRVLDVQQI 383
Score = 174 (66.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 31/68 (45%), Positives = 52/68 (76%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F + + QLSF EI+++A++ + EVE L++KAL++GL+KG ID+V++ ++TWVQP
Sbjct: 316 EMTFTRPANNRQLSFQEIAQSAKIQVNEVELLVMKALSVGLIKGSIDEVEKKVHMTWVQP 375
Query: 416 RVLSKDQV 423
RVL Q+
Sbjct: 376 RVLDVQQI 383
>FB|FBgn0028691 [details] [associations]
symbol:Rpn9 "Regulatory particle non-ATPase 9" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0007096 "regulation of exit from mitosis"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:AE014297 GO:GO:0006508 GO:GO:0004175 GO:GO:0008541
eggNOG:NOG272621 KO:K03039 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:AF145311 EMBL:AY061232 RefSeq:NP_651177.1 RefSeq:NP_732899.1
UniGene:Dm.3423 IntAct:Q7KMP8 STRING:Q7KMP8
EnsemblMetazoa:FBtr0084469 EnsemblMetazoa:FBtr0084470 GeneID:42802
KEGG:dme:Dmel_CG10230 UCSC:CG10230-RA CTD:42802 FlyBase:FBgn0028691
InParanoid:Q7KMP8 OrthoDB:EOG4K0P3Z GenomeRNAi:42802 NextBio:830641
Uniprot:Q7KMP8
Length = 382
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 159/350 (45%), Positives = 239/350 (68%)
Query: 8 TVYLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYH 67
T YL +++ + N E++A+W +EELYN+KLW++LT+ ++ FV++ ++Q E L LY
Sbjct: 9 TAYLATQKK--TTNKELAAEWTLIEELYNEKLWNELTIKLVTFVRHESLQDETALLQLYQ 66
Query: 68 KFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQM 127
F+ +FETKINP L++I+EV+ +++ D++EA+ L+ +DKVK EA +++Q +
Sbjct: 67 NFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEFLEKMKDKVKICDEAVWYLQVMQGNL 126
Query: 128 IMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTA 187
++ D L+ +K+I+E+ ++ + VT +H ++Y++AS YR+ K S YYR
Sbjct: 127 YLSNLND----LNATKKIIEELRDVLEEAGNVTPVHGKYYMLASQYYRRVGKHSDYYRCG 182
Query: 188 LRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVEL 247
L++LGC +++ Q AF +GLAALL D VYNIGELLAHPIL+SL+ T N WL+EL
Sbjct: 183 LQFLGC-SMDEYPRDQWAQQAFFLGLAALLGDGVYNIGELLAHPILESLKGTENEWLMEL 241
Query: 248 LRAFNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEI 307
L+AFN GDI KF M+ WS + D+ A E KL QKI+LLCLME+ FK+ +SF +I
Sbjct: 242 LKAFNTGDINKFNDMKKIWSKIPDLAAQEVKLRQKISLLCLMEMTFKRSAIERAISFTDI 301
Query: 308 SEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
++ +LP EVE LI+KALAL LV+G IDQV N++WVQPRVL++ Q+
Sbjct: 302 AQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQPRVLNRSQI 351
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ FK+ +SF +I++ +LP EVE LI+KALAL LV+G IDQV N++WVQP
Sbjct: 284 EMTFKRSAIERAISFTDIAQETKLPAKEVELLIMKALALDLVRGEIDQVAGVVNMSWVQP 343
Query: 416 RVLSKDQV 423
RVL++ Q+
Sbjct: 344 RVLNRSQI 351
>UNIPROTKB|P84169 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9031 "Gallus gallus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0022624 HOVERGEN:HBG053740 EMBL:CB017092
EMBL:CN218176 EMBL:BU427099 IPI:IPI00601716 Uniprot:P84169
Length = 376
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 158/344 (45%), Positives = 231/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELYNKKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+E+E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGC+
Sbjct: 126 --GDLQVTKETIEEVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCI 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + VYN GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
++E F+ ++ W D+ ANE L QKI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 NVETFQALKSAWGQQPDLAANEALLLQKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKV 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>UNIPROTKB|E2R5N5 [details] [associations]
symbol:PSMD13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007127 "meiosis I" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007127 GO:GO:0005838 CTD:5719
KO:K03039 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:AAEX03011305 RefSeq:XP_848457.1 ProteinModelPortal:E2R5N5
Ensembl:ENSCAFT00000039828 GeneID:475934 KEGG:cfa:475934
NextBio:20851679 Uniprot:E2R5N5
Length = 376
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 155/344 (45%), Positives = 232/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRSTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>UNIPROTKB|Q5E964 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0022624 EMBL:BT021056 EMBL:BC102200
IPI:IPI00718435 RefSeq:NP_001019703.1 UniGene:Bt.21635
STRING:Q5E964 PRIDE:Q5E964 GeneID:513525 KEGG:bta:513525 CTD:5719
eggNOG:NOG272621 HOGENOM:HOG000216633 HOVERGEN:HBG053740
InParanoid:Q5E964 KO:K03039 OrthoDB:EOG42JNRJ NextBio:20870894
Uniprot:Q5E964
Length = 376
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 155/344 (45%), Positives = 231/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E +++++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQVTKETIEDVEEMLSNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL D V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+ +A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIARSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/69 (49%), Positives = 53/69 (76%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+ +A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>RGD|1305236 [details] [associations]
symbol:Psmd13 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 13" species:10116 "Rattus norvegicus" [GO:0005838
"proteasome regulatory particle" evidence=IEA;ISO] [GO:0007127
"meiosis I" evidence=IEA;ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 RGD:1305236 GO:GO:0007127 EMBL:CH473953 GO:GO:0022624
GO:GO:0005838 CTD:5719 eggNOG:NOG272621 HOGENOM:HOG000216633
KO:K03039 OrthoDB:EOG42JNRJ OMA:LAHPILE
GeneTree:ENSGT00390000001802 EMBL:BC158732 IPI:IPI00202283
RefSeq:NP_001102395.1 UniGene:Rn.16918 IntAct:B0BN93 STRING:B0BN93
PhosphoSite:B0BN93 World-2DPAGE:0004:B0BN93 PRIDE:B0BN93
Ensembl:ENSRNOT00000019642 GeneID:365388 KEGG:rno:365388
UCSC:RGD:1305236 NextBio:687344 Genevestigator:B0BN93
Uniprot:B0BN93
Length = 376
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 153/344 (44%), Positives = 232/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
D+++F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 DVDRFQTLKSAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ +VE L++KAL++GLV+G ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/69 (46%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + +VE L++KAL++GLV+G ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>UNIPROTKB|Q9UNM6 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0007127 "meiosis I" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=TAS] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic
cell cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0007127
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:AC136475 GO:GO:0006521 Reactome:REACT_383 EMBL:CH471278
GO:GO:0005838 CTD:5719 eggNOG:NOG272621 HOGENOM:HOG000216633
HOVERGEN:HBG053740 KO:K03039 OrthoDB:EOG42JNRJ EMBL:AB009398
EMBL:AF107837 EMBL:AF086708 EMBL:BT007307 EMBL:AK094775
EMBL:BC001100 EMBL:BC001747 IPI:IPI00375380 IPI:IPI00549672
RefSeq:NP_002808.3 RefSeq:NP_787128.2 UniGene:Hs.134688
ProteinModelPortal:Q9UNM6 DIP:DIP-27576N IntAct:Q9UNM6
MINT:MINT-1161305 STRING:Q9UNM6 PhosphoSite:Q9UNM6 DMDM:20978558
PaxDb:Q9UNM6 PRIDE:Q9UNM6 DNASU:5719 Ensembl:ENST00000431206
Ensembl:ENST00000532097 GeneID:5719 KEGG:hsa:5719 UCSC:uc001lol.2
UCSC:uc001loo.2 GeneCards:GC11P000226 H-InvDB:HIX0009340
HGNC:HGNC:9558 HPA:HPA038692 MIM:603481 neXtProt:NX_Q9UNM6
PharmGKB:PA33904 InParanoid:Q9UNM6 OMA:INQVEQV PhylomeDB:Q9UNM6
ChiTaRS:PSMD13 GenomeRNAi:5719 NextBio:22226 ArrayExpress:Q9UNM6
Bgee:Q9UNM6 CleanEx:HS_PSMD13 Genevestigator:Q9UNM6
GermOnline:ENSG00000185627 Uniprot:Q9UNM6
Length = 376
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 154/344 (44%), Positives = 231/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ + P A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQNSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>UNIPROTKB|F1RGC9 [details] [associations]
symbol:PSMD13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007127 "meiosis I" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007127 GO:GO:0005838 KO:K03039
OMA:LAHPILE GeneTree:ENSGT00390000001802 EMBL:CU928488
RefSeq:XP_003124275.1 UniGene:Ssc.55246 Ensembl:ENSSSCT00000015909
GeneID:100517815 KEGG:ssc:100517815 Uniprot:F1RGC9
Length = 376
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 154/344 (44%), Positives = 231/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E +++ + GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQVTKETIEDVEEMLSSLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
++E+F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 NVERFQTLKTAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>MGI|MGI:1345192 [details] [associations]
symbol:Psmd13 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 13" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0004175 "endopeptidase
activity" evidence=ISA] [GO:0005838 "proteasome regulatory
particle" evidence=IDA] [GO:0007127 "meiosis I" evidence=IMP]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 MGI:MGI:1345192 GO:GO:0004175
GO:GO:0007127 GO:GO:0005838 CTD:5719 eggNOG:NOG272621
HOGENOM:HOG000216633 HOVERGEN:HBG053740 KO:K03039 OrthoDB:EOG42JNRJ
OMA:LAHPILE ChiTaRS:PSMD13 EMBL:AF107838 EMBL:AK051078
EMBL:AK075936 EMBL:AK081160 EMBL:AK145654 EMBL:AK163017
EMBL:AK167169 EMBL:AK171504 IPI:IPI00126048 RefSeq:NP_036005.1
UniGene:Mm.29760 ProteinModelPortal:Q9WVJ2 IntAct:Q9WVJ2
STRING:Q9WVJ2 PhosphoSite:Q9WVJ2 PaxDb:Q9WVJ2 PRIDE:Q9WVJ2
Ensembl:ENSMUST00000026560 GeneID:23997 KEGG:mmu:23997
GeneTree:ENSGT00390000001802 InParanoid:Q9WVJ2 NextBio:303913
Bgee:Q9WVJ2 Genevestigator:Q9WVJ2 GermOnline:ENSMUSG00000025487
Uniprot:Q9WVJ2
Length = 376
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 152/344 (44%), Positives = 231/344 (67%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELY KKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDAD 134
++NP+SL+EI+ + ++D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI--- 125
Query: 135 KPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
G L ++ I+++E ++N++ GVT++HSRFY ++S Y+ + YY+ ALR+LGCV
Sbjct: 126 --GDLQATKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCV 183
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAG 254
D+ DL S+Q + AF +GLA LL + V+N GELL HP+L+SL+ T WL++ L AFN+G
Sbjct: 184 DIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSG 243
Query: 255 DIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQL 313
+++F+ ++ W D+ ANE +L +KI LLCLME+ F + P +H QL+F EI+++A++
Sbjct: 244 AVDRFQTLKCAWGQQPDLAANEAQLLRKIQLLCLMEMTFTR-PANHRQLTFEEIAKSAKI 302
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ +VE L++KAL++GLV+G ID+VD+ ++TWVQPRVL Q+
Sbjct: 303 TVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQI 346
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/69 (46%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + +VE L++KAL++GLV+G ID+VD+ ++TWVQ
Sbjct: 279 EMTFTR-PANHRQLTFEEIAKSAKITVNKVELLVMKALSVGLVRGSIDEVDKRVHMTWVQ 337
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 338 PRVLDLQQI 346
>UNIPROTKB|G8JKV6 [details] [associations]
symbol:PSMD13 "26S proteasome non-ATPase regulatory subunit
13" species:9913 "Bos taurus" [GO:0007127 "meiosis I" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007127
GO:GO:0005838 OMA:LAHPILE GeneTree:ENSGT00390000001802
EMBL:DAAA02032478 EMBL:DAAA02032479 Ensembl:ENSBTAT00000002650
Uniprot:G8JKV6
Length = 345
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 143/321 (44%), Positives = 217/321 (67%)
Query: 38 KLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINPVSLMEIMEVITNHLSDQE 97
+LWHQLTL VL FVQ+P + L LY F+ FE ++NP+SL+EI+ + ++D
Sbjct: 1 RLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPN 60
Query: 98 EALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDADKPGSLDEVEKLIDEIELLVNDIE 157
AL L+ +KVK++ EA LCK + +N G L ++ I+++E +++++
Sbjct: 61 VALSFLEKTREKVKSSDEAVILCKTAIGALKLNI-----GDLQVTKETIEDVEEMLSNLP 115
Query: 158 GVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLNDLTASDQVQHAFLIGLAALL 217
GVT++HSRFY ++S Y+ + YY+ ALR+LGCVD+ DL S+Q + AF +GLA LL
Sbjct: 116 GVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLL 175
Query: 218 ADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFELMRPQWSAMNDIKANEN 277
D V+N GELL HP+L+SL+ T WL++ L AFN+G++E+F+ ++ W D+ ANE
Sbjct: 176 GDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTLKTAWGQQPDLAANEA 235
Query: 278 KLSQKIALLCLMELAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHID 336
+L +KI LLCLME+ F + P +H QL+F EI+ +A++ + EVE L++KAL++GLVKG ID
Sbjct: 236 QLLRKIQLLCLMEMTFTR-PANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVKGSID 294
Query: 337 QVDESFNVTWVQPRVLSKDQL 357
+VD+ ++TWVQPRVL Q+
Sbjct: 295 EVDKRVHMTWVQPRVLDLQQI 315
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 34/69 (49%), Positives = 53/69 (76%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+ +A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 248 EMTFTR-PANHRQLTFEEIARSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 306
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 307 PRVLDLQQI 315
>WB|WBGene00004465 [details] [associations]
symbol:rpn-9 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 EMBL:Z49130 GO:GO:0005838 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV
GeneTree:ENSGT00390000001802 PIR:T24581 RefSeq:NP_496405.1
ProteinModelPortal:Q22253 IntAct:Q22253 MINT:MINT-210985
STRING:Q22253 PaxDb:Q22253 EnsemblMetazoa:T06D8.8.1
EnsemblMetazoa:T06D8.8.2 GeneID:174715 KEGG:cel:CELE_T06D8.8
UCSC:T06D8.8.1 CTD:174715 WormBase:T06D8.8 InParanoid:Q22253
NextBio:885188 Uniprot:Q22253
Length = 387
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 136/355 (38%), Positives = 215/355 (60%)
Query: 10 YLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKF 69
YL K A N ++ W NL+EL+ KKLWHQLT+ + V+ P ++ + Y F
Sbjct: 6 YLNGKLAA--ANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYRLF 63
Query: 70 VISFETKINPVSLMEIMEVITNHLS--DQEEALVLLQSFEDKV-KNNLEAKSL-CKILQA 125
V +E ++NP+ L+EI I +++ D+++++ L + + K+ + L ++A
Sbjct: 64 VAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVINKDKIAVARLHTGEIEA 123
Query: 126 QMIMNKDADKPGSLDEVEKL---IDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSL 182
++ NKD K G + +++ + ID + V+ + GVT +H+ FY V+S R+ +
Sbjct: 124 RL-ENKD--KNGQIIDLKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLYLREVGDFAG 180
Query: 183 YYRTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNA 242
YYR ALRYLG D N+LT + HA L+G AALL ++V+N GELLAHPIL SL+ T
Sbjct: 181 YYREALRYLGVEDANNLTTEQKQVHAVLLGFAALLGENVHNFGELLAHPILKSLEGTRER 240
Query: 243 WLVELLRAFNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQL 302
W+V++L AFN+GD+ +F + W +D+K ++ L+ KI L+ +MELA + + +
Sbjct: 241 WIVDVLLAFNSGDLTRFFSLEGDWGGWDDLKKQKDFLTAKIRLMAVMELAVSRPTKARSV 300
Query: 303 SFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
SF EI+ Q+P EVEFL++KAL+ L++G I+QV++ VTWVQPRVL Q+
Sbjct: 301 SFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVYVTWVQPRVLDNPQI 355
Score = 161 (61.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 350 RVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFN 409
R+++ +LA + + +SF EI+ Q+P EVEFL++KAL+ L++G I+QV++
Sbjct: 282 RLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVY 341
Query: 410 VTWVQPRVLSKDQV 423
VTWVQPRVL Q+
Sbjct: 342 VTWVQPRVLDNPQI 355
>UNIPROTKB|Q22253 [details] [associations]
symbol:rpn-9 "Protein RPN-9" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 EMBL:Z49130 GO:GO:0005838
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV
GeneTree:ENSGT00390000001802 PIR:T24581 RefSeq:NP_496405.1
ProteinModelPortal:Q22253 IntAct:Q22253 MINT:MINT-210985
STRING:Q22253 PaxDb:Q22253 EnsemblMetazoa:T06D8.8.1
EnsemblMetazoa:T06D8.8.2 GeneID:174715 KEGG:cel:CELE_T06D8.8
UCSC:T06D8.8.1 CTD:174715 WormBase:T06D8.8 InParanoid:Q22253
NextBio:885188 Uniprot:Q22253
Length = 387
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 136/355 (38%), Positives = 215/355 (60%)
Query: 10 YLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKF 69
YL K A N ++ W NL+EL+ KKLWHQLT+ + V+ P ++ + Y F
Sbjct: 6 YLNGKLAA--ANGPLADDWKNLKELWEKKLWHQLTVLTRSLVKKPQFVASTDMHEFYRLF 63
Query: 70 VISFETKINPVSLMEIMEVITNHLS--DQEEALVLLQSFEDKV-KNNLEAKSL-CKILQA 125
V +E ++NP+ L+EI I +++ D+++++ L + + K+ + L ++A
Sbjct: 64 VAEWELRVNPLQLVEICISIAQNIATKDKQKSMEFLSKIGNVINKDKIAVARLHTGEIEA 123
Query: 126 QMIMNKDADKPGSLDEVEKL---IDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSL 182
++ NKD K G + +++ + ID + V+ + GVT +H+ FY V+S R+ +
Sbjct: 124 RL-ENKD--KNGQIIDLKSIRTQIDSTQHEVDSLVGVTEVHAPFYRVSSLYLREVGDFAG 180
Query: 183 YYRTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNA 242
YYR ALRYLG D N+LT + HA L+G AALL ++V+N GELLAHPIL SL+ T
Sbjct: 181 YYREALRYLGVEDANNLTTEQKQVHAVLLGFAALLGENVHNFGELLAHPILKSLEGTRER 240
Query: 243 WLVELLRAFNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQL 302
W+V++L AFN+GD+ +F + W +D+K ++ L+ KI L+ +MELA + + +
Sbjct: 241 WIVDVLLAFNSGDLTRFFSLEGDWGGWDDLKKQKDFLTAKIRLMAVMELAVSRPTKARSV 300
Query: 303 SFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
SF EI+ Q+P EVEFL++KAL+ L++G I+QV++ VTWVQPRVL Q+
Sbjct: 301 SFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVYVTWVQPRVLDNPQI 355
Score = 161 (61.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 350 RVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFN 409
R+++ +LA + + +SF EI+ Q+P EVEFL++KAL+ L++G I+QV++
Sbjct: 282 RLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQVEQVVY 341
Query: 410 VTWVQPRVLSKDQV 423
VTWVQPRVL Q+
Sbjct: 342 VTWVQPRVLDNPQI 355
>ASPGD|ASPL0000013342 [details] [associations]
symbol:AN3716 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:BN001302 EMBL:AACD01000061 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OrthoDB:EOG4XSPZG RefSeq:XP_661320.1
STRING:Q5B6W4 EnsemblFungi:CADANIAT00005009 GeneID:2873142
KEGG:ani:AN3716.2 OMA:ASTECAD Uniprot:Q5B6W4
Length = 381
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 124/338 (36%), Positives = 204/338 (60%)
Query: 22 PE-ISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINPV 80
PE A +L+ EE + +KLWHQLT A++ F + P + + L+ FV+SF KIN +
Sbjct: 18 PEQCQASFLSFEEYWERKLWHQLTNALIDFFRLP--ESAPQRLPLFKTFVLSFADKINQL 75
Query: 81 SLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDADKPGSLD 140
+ + + + + +D +E L L S DKV N +++ A++ K + +LD
Sbjct: 76 NFVSLGLMASTECADDQERLSFLTSLADKV-NKPDSQDAYIYALAEVANVKQ--RLHNLD 132
Query: 141 EVEKLIDEIELLVNDIEGV-TAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLNDL 199
+K ++ + +++ + V +H+ FY V + Y + + + +Y+ AL YL C+DL DL
Sbjct: 133 GAQKDLETCQKVLDSFDAVENVVHASFYKVNADYYHAKQEFASFYKNALLYLACIDLEDL 192
Query: 200 TASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKF 259
+ S++V A+ + +AAL++DS+YN GELL HPILDSL +TP++WL +LL AFN GD+ +
Sbjct: 193 SESERVSRAYNLSVAALVSDSIYNFGELLLHPILDSLTETPHSWLRDLLFAFNRGDLTAY 252
Query: 260 ELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIEVE 319
+++ S ++A+ L QKI+L L E+ F++ P L+FA IS ++ E+E
Sbjct: 253 DVLAGNISKNQLLQAHRFFLYQKISLSALTEMVFRRPPHDRNLTFASISAETKVKPEEIE 312
Query: 320 FLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
L++KAL+LGL+KG IDQV + + WVQP+VL Q+
Sbjct: 313 HLVMKALSLGLLKGAIDQVGQIAQINWVQPKVLDMKQI 350
Score = 152 (58.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
++ F++ P L+FA IS ++ E+E L++KAL+LGL+KG IDQV + + WVQP
Sbjct: 283 EMVFRRPPHDRNLTFASISAETKVKPEEIEHLVMKALSLGLLKGAIDQVGQIAQINWVQP 342
Query: 416 RVLSKDQV 423
+VL Q+
Sbjct: 343 KVLDMKQI 350
>DICTYBASE|DDB_G0285105 [details] [associations]
symbol:psmD13 "26S proteasome non-ATPase regulatory
subunit 13" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0285105 GenomeReviews:CM000153_GR GO:GO:0004175
GO:GO:0006511 EMBL:AAFI02000074 GO:GO:0005838 eggNOG:NOG272621
KO:K03039 RefSeq:XP_639866.1 STRING:Q54NQ0
EnsemblProtists:DDB0233004 GeneID:8624937 KEGG:ddi:DDB_G0285105
OMA:LAHPILE ProtClustDB:CLSZ2430421 Uniprot:Q54NQ0
Length = 385
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 121/344 (35%), Positives = 205/344 (59%)
Query: 22 PEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINPVS 81
P++S Q N+++ Y KLWHQLT + + +P + ++ EL + Y F+ FE K+ P+S
Sbjct: 18 PDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLS 77
Query: 82 LMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDADKPGSLDE 141
L+EI + D +E+ +++ KVK + A IL I N + + G ++
Sbjct: 78 LVEICIAVARQF-DTDESRKFIETISQKVKKDKSAY----ILTLSYIANMNL-RSGVAEQ 131
Query: 142 VEKLIDEIELLVNDIEGVTA----IHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLN 197
++ +EL +++GVT ++S FY V++ + +++ S +Y+ AL YL L
Sbjct: 132 LQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKNALMYLSYCKLE 191
Query: 198 DLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIE 257
++ +Q A+ + +AAL+ ++VY G+L+A+PIL +L+ + + WL+ L+AFN GDI+
Sbjct: 192 TISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQ 251
Query: 258 KFE-LM---RPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQL 313
+FE LM R S I N KL QKI++L L+ELAF+ +SF++I++A +L
Sbjct: 252 QFEGLMSQHRDIISTQTAITNNMQKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKL 311
Query: 314 PLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
PL E+E L++K+L+L L+KG IDQ E ++TWV PR+L +Q+
Sbjct: 312 PLGEIEHLLMKSLSLNLIKGSIDQTVEIIHITWVTPRILDLNQI 355
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 32/73 (43%), Positives = 52/73 (71%)
Query: 351 VLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNV 410
+LS +LAF+ +SF++I++A +LPL E+E L++K+L+L L+KG IDQ E ++
Sbjct: 283 ILSLLELAFRTPSDKRSISFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSIDQTVEIIHI 342
Query: 411 TWVQPRVLSKDQV 423
TWV PR+L +Q+
Sbjct: 343 TWVTPRILDLNQI 355
>TAIR|locus:2171998 [details] [associations]
symbol:AT5G45620 "AT5G45620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000502 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV ProtClustDB:CLSN2690225
EMBL:AY093136 EMBL:BT003384 EMBL:AY230841 IPI:IPI00516535
RefSeq:NP_199375.2 UniGene:At.23294 UniGene:At.74818
ProteinModelPortal:Q8RWF0 IntAct:Q8RWF0 STRING:Q8RWF0 PaxDb:Q8RWF0
PRIDE:Q8RWF0 EnsemblPlants:AT5G45620.1 GeneID:834602
KEGG:ath:AT5G45620 TAIR:At5g45620 InParanoid:Q8RWF0
PhylomeDB:Q8RWF0 ArrayExpress:Q8RWF0 Genevestigator:Q8RWF0
Uniprot:Q8RWF0
Length = 386
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 120/343 (34%), Positives = 200/343 (58%)
Query: 21 NPEISAQWLN-LEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINP 79
+PE+ +W N L +LY KKLWHQLTL + F+ Q L YH F+ FETKIN
Sbjct: 14 HPELG-EWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYHNFITDFETKINL 72
Query: 80 VSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDADKPGSL 139
+ L V++ S++E A+ L+S +K++ E + I+ + + G
Sbjct: 73 LKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIETQKALFKLEQGDQ 132
Query: 140 DEVEKLIDEIELLVNDIEGVT-AIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLND 198
E +K++D+ + ++ + + ++++ FY V+S ++ + + S +Y++AL YL + D
Sbjct: 133 KECKKILDDGKSSLDSMTDIDPSVYANFYWVSSQYHKCRQEFSDFYKSALLYLAYTSVED 192
Query: 199 LTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEK 258
L+ S ++ AF + L+ALL +++YN GELLAHPIL SL T WL +L+AFN GD+ +
Sbjct: 193 LSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLYHILQAFNHGDLVQ 252
Query: 259 F-ELMRPQWS---AMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLP 314
+ EL R + A + NE KL +KI +LCL+E+ F + + + I+E +L
Sbjct: 253 YQELCRVHNASLIAQPALVENEKKLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLS 312
Query: 315 LIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ +VE L++K+L++ L++G IDQV+ + V+W QPRVL Q+
Sbjct: 313 IEDVEHLLMKSLSVHLIEGIIDQVNGTIYVSWAQPRVLGIPQI 355
Score = 116 (45.9 bits), Expect = 0.00072, P = 0.00072
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 351 VLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNV 410
+L ++ F + + + I+E +L + +VE L++K+L++ L++G IDQV+ + V
Sbjct: 283 ILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVNGTIYV 342
Query: 411 TWVQPRVLSKDQV 423
+W QPRVL Q+
Sbjct: 343 SWAQPRVLGIPQI 355
>TAIR|locus:504955552 [details] [associations]
symbol:AT4G19006 "AT4G19006" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0030163 GO:GO:0000502
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
EMBL:AY230842 EMBL:AK117761 IPI:IPI00529601 RefSeq:NP_680721.2
UniGene:At.21756 ProteinModelPortal:Q8GYA6 IntAct:Q8GYA6
STRING:Q8GYA6 PaxDb:Q8GYA6 PRIDE:Q8GYA6 EnsemblPlants:AT4G19006.1
GeneID:827638 KEGG:ath:AT4G19006 TAIR:At4g19006 InParanoid:Q8GYA6
PhylomeDB:Q8GYA6 ProtClustDB:CLSN2690225 Genevestigator:Q8GYA6
Uniprot:Q8GYA6
Length = 386
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 121/356 (33%), Positives = 209/356 (58%)
Query: 10 YLTAKQEAYSKNPEISAQWLN-LEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHK 68
YL +++ A+ PE+ +W N L +LY KKLWHQLTL + F+ Q L LY+
Sbjct: 6 YLESQKNAH---PELG-EWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYNN 61
Query: 69 FVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAK--SLCKILQAQ 126
F+ FET+IN + L V++ ++E A+ L+ +K+K E++ ++ Q
Sbjct: 62 FITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIETQ 121
Query: 127 MIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVT-AIHSRFYLVASTLYRKQAKLSLYYR 185
+ + K + G E +K++D+ + L++ + + ++++ F+ V+S ++ + + S +Y+
Sbjct: 122 IALFKL--EQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVSSQYHKVRQEFSEFYK 179
Query: 186 TALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLV 245
AL YL ++ L+ S ++ AF + L+ALL +++YN GELLAHPIL SL T WL
Sbjct: 180 NALLYLAYTSVDSLSESFKLDLAFDLSLSALLGENIYNFGELLAHPILKSLLGTNVEWLY 239
Query: 246 ELLRAFNAGDIEKF-ELMR---PQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQ 301
+L+AFN GD+ ++ EL R SA + NE KL +KI +LCL+E+ F +
Sbjct: 240 HILQAFNHGDLVQYQELCRVHNASLSAQPALVENEKKLLEKINILCLIEIIFSRPAEDRT 299
Query: 302 LSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+ + I+E +L + +VE L++K+L++ L++G +DQV+ + V+W QPRVL Q+
Sbjct: 300 IPLSVIAERTKLSIEDVEHLLMKSLSVHLIEGILDQVNGTVYVSWAQPRVLGIPQI 355
>UNIPROTKB|G4N7S1 [details] [associations]
symbol:MGG_03524 "26S proteasome regulatory subunit RPN9"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0000502
GO:GO:0043581 EMBL:CM001234 KO:K03039 RefSeq:XP_003716395.1
EnsemblFungi:MGG_03524T0 GeneID:2676989 KEGG:mgr:MGG_03524
Uniprot:G4N7S1
Length = 382
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 119/340 (35%), Positives = 192/340 (56%)
Query: 23 EISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFETKINPVSL 82
E+ L E+ + +KLWHQLT A L F +P I + L Y FV F KIN + L
Sbjct: 20 ELQPLILKFEDYWERKLWHQLTEASLEFFDHP-ISRPARLH-FYKVFVAKFADKINQLKL 77
Query: 83 MEIMEVITNHLSDQEEALVLLQSFEDKV--KNNLEAKSLCKILQAQMIMN-KDADKPGS- 138
++I D +E L L++ KV +++ +A I A++ ++ KD +
Sbjct: 78 VDIALKAATAAKDPKERLQFLETVAKKVDDEDSQDAYVFALIAVARVKLDLKDPEGTRKD 137
Query: 139 LDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCVDLND 198
LD+ E+++D + +E T + + FY + Y+ QA + YYR AL YL C+D++
Sbjct: 138 LDKAERILDSFD----SVE--TVVSAAFYSAQADYYQAQADFASYYRNALLYLACIDVSA 191
Query: 199 LTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTP-NAWLVELLRAFNAGDIE 257
LT ++ A+ + +AAL + S+YN GELL HPILD+L + ++WL ELL AFN GD+
Sbjct: 192 LTPEERRSRAYDLAIAALASTSIYNFGELLLHPILDALTLSDKDSWLRELLFAFNRGDLA 251
Query: 258 KFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEAAQLPLIE 317
++++ + + + +L QKI L L E F++ P ++F I+ ++ E
Sbjct: 252 AYDVLSGHIGSNPLLAKHRGQLRQKIYLAALTEAVFRRPPHDRAMTFQTIARETKVQPDE 311
Query: 318 VEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
+E L++KAL+LGL++G+IDQVDE ++ WVQP+VL Q+
Sbjct: 312 IEHLVMKALSLGLLRGNIDQVDEVAHINWVQPKVLDMKQI 351
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 356 QLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQP 415
+ F++ P ++F I+ ++ E+E L++KAL+LGL++G+IDQVDE ++ WVQP
Sbjct: 284 EAVFRRPPHDRAMTFQTIARETKVQPDEIEHLVMKALSLGLLRGNIDQVDEVAHINWVQP 343
Query: 416 RVLSKDQV 423
+VL Q+
Sbjct: 344 KVLDMKQI 351
>UNIPROTKB|E1C2R6 [details] [associations]
symbol:E1C2R6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0007127 "meiosis I" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007127
GO:GO:0005838 GeneTree:ENSGT00390000001802 EMBL:AADN02040062
EMBL:AADN02040063 EMBL:AADN02040064 IPI:IPI00821969
Ensembl:ENSGALT00000040352 OMA:RGTPPCP ArrayExpress:E1C2R6
Uniprot:E1C2R6
Length = 381
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 135/356 (37%), Positives = 202/356 (56%)
Query: 15 QEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELRDLYHKFVISFE 74
Q++ S P +A W LEELYNKKLWHQLTL VL FVQ+P + L LY F+ FE
Sbjct: 9 QQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFE 68
Query: 75 TKINPVSLMEI-MEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQAQMIMNKDA 133
++NP+SL+EI + V+ +D AL L+ +KVK++ EA LCK + +N
Sbjct: 69 HRVNPLSLVEIILHVVRQMTADPTVALTFLEKTREKVKSSDEAVILCKTAIGALKLNI-G 127
Query: 134 DKPGSLDEVEKLIDEIELLVNDIEGVTA-IHSRFYLVASTLYRKQAKLSLYYRTALR-YL 191
D + +V + + E+E ++N++ GVT+ + +R +++ + Q ++ + TAL Y
Sbjct: 128 DL--QVTKVRRPLKEVEEMLNNLPGVTSTLIARLLMISPSQVTYQEQM--WEHTALHTYK 183
Query: 192 GCV--------DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAW 243
GC+ L + AF+ L L +V+N L ++SL T W
Sbjct: 184 GCLLRVSGVPLGLKTPPLKKKGPVAFIRRLPTLWG-TVFNSFNLRTC-FMESLPST--VW 239
Query: 244 LVEL-LRAFNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH-Q 301
LV L + + LM PQ D+ ANE L QKI LLCLME+ F + P +H Q
Sbjct: 240 LVMASLSSKGIYEAPSVGLMLPQ---QPDLAANEALLLQKIQLLCLMEMTFTR-PANHRQ 295
Query: 302 LSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
L+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQPRVL Q+
Sbjct: 296 LTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQI 351
Score = 174 (66.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/69 (49%), Positives = 54/69 (78%)
Query: 356 QLAFKKIPGSH-QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQ 414
++ F + P +H QL+F EI+++A++ + EVE L++KAL++GLVKG ID+VD+ ++TWVQ
Sbjct: 284 EMTFTR-PANHRQLTFEEIAKSAKVTVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQ 342
Query: 415 PRVLSKDQV 423
PRVL Q+
Sbjct: 343 PRVLDLQQI 351
>POMBASE|SPAC607.05 [details] [associations]
symbol:rpn9 "19S proteasome regulatory subunit Rpn9"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAC607.05
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0008541 eggNOG:NOG272621
HOGENOM:HOG000216633 KO:K03039 OMA:INQVEQV PIR:T50225
RefSeq:NP_593594.1 ProteinModelPortal:Q9US13 STRING:Q9US13
EnsemblFungi:SPAC607.05.1 GeneID:2543114 KEGG:spo:SPAC607.05
OrthoDB:EOG4XSPZG NextBio:20804141 Uniprot:Q9US13
Length = 381
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 119/348 (34%), Positives = 195/348 (56%)
Query: 19 SKNPE-ISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELR-DLYHKFVISFETK 76
++ PE + ++ +E+LY +KLW QLT A++ F P + LR LY FV SF
Sbjct: 18 TRAPESLQQSYILMEDLYERKLWKQLTDALIVFFDTP---ETVPLRLPLYTNFVNSFRPN 74
Query: 77 INPVSLMEIMEVITNHLSDQEEALVLLQSF-----EDKVKNNLEAKSLCKILQAQMIMNK 131
IN + + M + +EAL L E+K K+ S+ I + ++I
Sbjct: 75 INQLKAV-YMGLKAFESCSNDEALRNLNQIVNELDEEKYKDAY-VYSIVAIARIKLIS-- 130
Query: 132 DADKPGSLDEVEKLIDEIELLVNDIEGVTA-IHSRFYLVASTLYRKQAKLSLYYRTALRY 190
G LDE +L+ + +++ I+ V + IHS +Y V++ Y+ +A + YYR L Y
Sbjct: 131 -----GKLDEARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLY 185
Query: 191 LGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRA 250
L C+DL+ + ++ V+ A + +AA+L D +YN GELL HP+ + L T + WL +L+ A
Sbjct: 186 LSCIDLDKCSHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIA 244
Query: 251 FNAGDIEKFELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLSFAEISEA 310
N GD+ FE + Q + M ++++ L QKI L+ L+EL F+ P L+F I+ A
Sbjct: 245 MNVGDLPLFERLMGQINKMPLLQSSVALLGQKIRLMALIELVFQLPPNQRTLTFDTIARA 304
Query: 311 AQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
++P EVE LI++AL++GL+ G ID+V + ++ VQ R+L+ Q+A
Sbjct: 305 TRIPSNEVELLIMRALSVGLITGVIDEVTQIVTISSVQSRILNHSQIA 352
Score = 133 (51.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 27/74 (36%), Positives = 48/74 (64%)
Query: 350 RVLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFN 409
R+++ +L F+ P L+F I+ A ++P EVE LI++AL++GL+ G ID+V +
Sbjct: 278 RLMALIELVFQLPPNQRTLTFDTIARATRIPSNEVELLIMRALSVGLITGVIDEVTQIVT 337
Query: 410 VTWVQPRVLSKDQV 423
++ VQ R+L+ Q+
Sbjct: 338 ISSVQSRILNHSQI 351
>SGD|S000002835 [details] [associations]
symbol:RPN9 "Non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0034515 "proteasome storage granule"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 SGD:S000002835 EMBL:U33007 GO:GO:0005198
EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248
GO:GO:0008541 GO:GO:0006511 RefSeq:NP_010720.3 GeneID:852042
KEGG:sce:YDR432W GO:GO:0034515 PDB:4B4T PDBsum:4B4T
eggNOG:NOG272621 HOGENOM:HOG000216633 KO:K03039 OMA:LAHPILE
GeneTree:ENSGT00390000001802 OrthoDB:EOG4XSPZG PIR:S69708
RefSeq:NP_010715.3 ProteinModelPortal:Q04062 DIP:DIP-5261N
IntAct:Q04062 MINT:MINT-529103 STRING:Q04062 PaxDb:Q04062
PeptideAtlas:Q04062 EnsemblFungi:YDR427W GeneID:852037
KEGG:sce:YDR427W CYGD:YDR427w NextBio:970278 Genevestigator:Q04062
GermOnline:YDR427W Uniprot:Q04062
Length = 393
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 118/367 (32%), Positives = 197/367 (53%)
Query: 8 TVYLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLTLAVLAFVQNPAIQKEGELR-DLY 66
T+ T + EA +P + + E+ Y +KLW QL+ ++ F + K LR LY
Sbjct: 9 TILSTLRMEA---DPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA---KSTPLRLRLY 62
Query: 67 HKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQS----FED----KVKNNLEAKS 118
FV F KIN +S+++ + D +E+L L F++ K +NN
Sbjct: 63 DNFVSKFYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDH 122
Query: 119 LCKILQAQMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTA-IHSRFYLVASTLYRKQ 177
IL + + L + L+D++E ++ + + I + FY S ++ +
Sbjct: 123 GDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFK 182
Query: 178 AKLSLYYRTALRYLGCVDLN-DLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSL 236
+ +Y T+L YL ++ + +T +++ Q A+ + ++ALL D +YN GELL HPI++++
Sbjct: 183 NDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETI 242
Query: 237 QQTPNA-WLVELLRAFNAGDIEKFE-LMRPQWSAMNDIKANENKLSQKIALLCLMELAFK 294
N WL +LL A GD +KF+ L++ Q S + + +E+ L QKI L+ L+E F
Sbjct: 243 VNDSNYDWLFQLLNALTVGDFDKFDSLIKVQISKIPILAQHESFLRQKICLMTLIETVFV 302
Query: 295 KIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSK 354
K LSF +IS+A LP VE L+++A++LGL+KG IDQV+E ++WVQPR++S
Sbjct: 303 K--NIRMLSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISG 360
Query: 355 DQLAFKK 361
DQ+ K
Sbjct: 361 DQITKMK 367
Score = 163 (62.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 368 LSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQV 423
LSF +IS+A LP VE L+++A++LGL+KG IDQV+E ++WVQPR++S DQ+
Sbjct: 308 LSFEDISKATHLPKDNVEHLVMRAISLGLLKGSIDQVNELVTISWVQPRIISGDQI 363
>GENEDB_PFALCIPARUM|PF10_0298 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 103/362 (28%), Positives = 194/362 (53%)
Query: 10 YLTAKQEAYSKNPEISAQWLNLEELYN---KKLWHQLTLAVLAFVQNPAIQKEGELRDLY 66
YL +E K + +++++EE+ N KKL H+LTL V FV N ++ + R L+
Sbjct: 13 YLNENEEILLKELKGKYEFMDMEEIKNYKEKKLHHELTLEVQKFVNNKDVELIDKFR-LF 71
Query: 67 HKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCK-ILQA 125
+ ++ TK+ E++ ++T D + ++ E ++N+ +A + + IL
Sbjct: 72 YTYLSPLITKLKKTIYAELLYIVTVDF-DTNWTIEYVKESEKNLENDKDAIIIYRCILIL 130
Query: 126 QMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLS-LYY 184
+ I +D E I+ + ++ + G+ + +FY A Y K K S LY
Sbjct: 131 KYIKLED------YKNCEAEIENAKNMLQGVIGLNVVAHKFYNYALMCYYKALKKSDLYV 184
Query: 185 RTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILD-SLQQTPNA- 242
+ AL YL LNDL D++ I + ++++++VYNIGE++ P+++ ++
Sbjct: 185 KYALLYLAYTPLNDLNDYDRIDIGTYICIHSIISENVYNIGEIIQLPLINVCIKNNEETN 244
Query: 243 WLVELLRAFNAGDIEKFE--LMRPQWSAMNDIKAN-ENKLSQKIALLCLMELAFKKIPGS 299
WL EL+ +N G+I+ F + + Q + N I N ++ + +K+ LL LM+LAFKK
Sbjct: 245 WLYELIYIYNEGNIDSFNETIGKYQSNIENCILKNYQHNMLKKMTLLALMDLAFKKKKQR 304
Query: 300 HQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAF 359
+SF EI++ ++ + EVE ++I A + ++ ID++ ++ +TWV+PRVL+ +++ F
Sbjct: 305 EDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKITWVKPRVLNNEKIYF 364
Query: 360 KK 361
K
Sbjct: 365 MK 366
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/81 (30%), Positives = 54/81 (66%)
Query: 351 VLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNV 410
+L+ LAFKK +SF EI++ ++ + EVE ++I A + ++ ID++ ++ +
Sbjct: 290 LLALMDLAFKKKKQREDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKI 349
Query: 411 TWVQPRVLSKDQVFWSLEETV 431
TWV+PRVL+ +++++ ++E++
Sbjct: 350 TWVKPRVLNNEKIYF-MKESI 369
>UNIPROTKB|Q8IJA0 [details] [associations]
symbol:PF10_0298 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 EMBL:AE014185 KO:K03039 OMA:INQVEQV
RefSeq:XP_001347582.1 ProteinModelPortal:Q8IJA0 PRIDE:Q8IJA0
EnsemblProtists:PF10_0298:mRNA GeneID:810455 KEGG:pfa:PF10_0298
EuPathDB:PlasmoDB:PF3D7_1030500 HOGENOM:HOG000284566
ProtClustDB:CLSZ2434533 Uniprot:Q8IJA0
Length = 393
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 103/362 (28%), Positives = 194/362 (53%)
Query: 10 YLTAKQEAYSKNPEISAQWLNLEELYN---KKLWHQLTLAVLAFVQNPAIQKEGELRDLY 66
YL +E K + +++++EE+ N KKL H+LTL V FV N ++ + R L+
Sbjct: 13 YLNENEEILLKELKGKYEFMDMEEIKNYKEKKLHHELTLEVQKFVNNKDVELIDKFR-LF 71
Query: 67 HKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCK-ILQA 125
+ ++ TK+ E++ ++T D + ++ E ++N+ +A + + IL
Sbjct: 72 YTYLSPLITKLKKTIYAELLYIVTVDF-DTNWTIEYVKESEKNLENDKDAIIIYRCILIL 130
Query: 126 QMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLS-LYY 184
+ I +D E I+ + ++ + G+ + +FY A Y K K S LY
Sbjct: 131 KYIKLED------YKNCEAEIENAKNMLQGVIGLNVVAHKFYNYALMCYYKALKKSDLYV 184
Query: 185 RTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILD-SLQQTPNA- 242
+ AL YL LNDL D++ I + ++++++VYNIGE++ P+++ ++
Sbjct: 185 KYALLYLAYTPLNDLNDYDRIDIGTYICIHSIISENVYNIGEIIQLPLINVCIKNNEETN 244
Query: 243 WLVELLRAFNAGDIEKFE--LMRPQWSAMNDIKAN-ENKLSQKIALLCLMELAFKKIPGS 299
WL EL+ +N G+I+ F + + Q + N I N ++ + +K+ LL LM+LAFKK
Sbjct: 245 WLYELIYIYNEGNIDSFNETIGKYQSNIENCILKNYQHNMLKKMTLLALMDLAFKKKKQR 304
Query: 300 HQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAF 359
+SF EI++ ++ + EVE ++I A + ++ ID++ ++ +TWV+PRVL+ +++ F
Sbjct: 305 EDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKITWVKPRVLNNEKIYF 364
Query: 360 KK 361
K
Sbjct: 365 MK 366
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/81 (30%), Positives = 54/81 (66%)
Query: 351 VLSKDQLAFKKIPGSHQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNV 410
+L+ LAFKK +SF EI++ ++ + EVE ++I A + ++ ID++ ++ +
Sbjct: 290 LLALMDLAFKKKKQREDISFHEIAQHCKIDINEVEKMLITAKSKNIITCKIDEIQKTVKI 349
Query: 411 TWVQPRVLSKDQVFWSLEETV 431
TWV+PRVL+ +++++ ++E++
Sbjct: 350 TWVKPRVLNNEKIYF-MKESI 369
>CGD|CAL0002740 [details] [associations]
symbol:orf19.1993 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA] [GO:0043248
"proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 CGD:CAL0002740
EMBL:AACQ01000031 EMBL:AACQ01000030 eggNOG:NOG272621 KO:K03039
RefSeq:XP_719443.1 RefSeq:XP_719572.1 STRING:Q5AD74 GeneID:3638686
GeneID:3638846 KEGG:cal:CaO19.1993 KEGG:cal:CaO19.9545
Uniprot:Q5AD74
Length = 416
Score = 256 (95.2 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 73/235 (31%), Positives = 128/235 (54%)
Query: 139 LDEVEK-LID---EIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYYRTALRYLGCV 194
L++ E LID + E L N++ + I+S +YL + + + YY L YL V
Sbjct: 173 LNKAEDILIDVAPKFESLNNNLN--SKINSAYYLEKTEHAKILNNYNDYYSNGLLYLSSV 230
Query: 195 DLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNA-------WLVEL 247
+LT ++ + + + +AALL D +YN GEL+ H I + Q ++ WL +L
Sbjct: 231 --TNLTDEEKNKLRYELCIAALLGDKIYNFGELILHDIFQEISQPSSSTTSSQYNWLYQL 288
Query: 248 LRAFNAGDIEKFELMRPQWSAMNDIKA---NENK--LSQKIALLCLMELAFKKIPGSHQL 302
+ NAG+++ F W ++ KA +++ L +K+ ++ L+EL + +L
Sbjct: 289 IINLNAGNVDNFN----HWLSIAIKKAPILEQHQIFLKEKLTIMALLEL----VSADKKL 340
Query: 303 SFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQL 357
SF ISE P+ +VE +IIK ++L L++G+I+Q + V+W+QPR+L+ DQ+
Sbjct: 341 SFDIISEKTNTPIDQVELIIIKTMSLHLIEGYINQDQQYVVVSWIQPRILNLDQV 395
Score = 152 (58.6 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 48/171 (28%), Positives = 84/171 (49%)
Query: 267 SAMNDIKANENKLSQKIALLCLMELAFKKIPGSHQLS----FAEISEAAQLPLIEVEFLI 322
S N +NKL + LC+ L KI +L F EIS+ + ++
Sbjct: 229 SVTNLTDEEKNKLRYE---LCIAALLGDKIYNFGELILHDIFQEISQPSS-STTSSQYNW 284
Query: 323 IKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLAFKK----------IPGSHQLSFAE 372
+ L + L G++D + ++ + +L + Q+ K+ + +LSF
Sbjct: 285 LYQLIINLNAGNVDNFNHWLSIAIKKAPILEQHQIFLKEKLTIMALLELVSADKKLSFDI 344
Query: 373 ISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQV 423
ISE P+ +VE +IIK ++L L++G+I+Q + V+W+QPR+L+ DQV
Sbjct: 345 ISEKTNTPIDQVELIIIKTMSLHLIEGYINQDQQYVVVSWIQPRILNLDQV 395
Score = 135 (52.6 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 45/167 (26%), Positives = 82/167 (49%)
Query: 8 TVYLTAKQEAYSKNPEISAQWLNLEELYNKKLWHQLT--LAVLAFVQNPAIQKEGELRDL 65
TV T + + S N E++ LE+ Y +KLWHQLT L + + + I L
Sbjct: 12 TVLATIRSK--SDNSELNNIIYQLEDFYERKLWHQLTQVLDQIYYTLDSTIITSNLKNRL 69
Query: 66 YHKFVISFETKINPVSLME-IMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQ 124
Y+ F+ F+ K+NP+ +++ ++E N D +E L L + + N+L+ ++
Sbjct: 70 YNLFIKQFQLKLNPIKVVDYLLESFEN---DPKETLSTLLTLKKDFINDLKRSHNYRVTD 126
Query: 125 AQMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIH---SRFYL 168
+ N D ++ +E E +E++ L+ D E V + +R+YL
Sbjct: 127 -DVDDNDDNEE----EEEENQDEELKQLIQDDEAVIYVKLQIARYYL 168
Score = 42 (19.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 13/66 (19%), Positives = 31/66 (46%)
Query: 366 HQLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQVFW 425
H + F EIS+ + ++ + L + L G++D + ++ + +L + Q+F
Sbjct: 264 HDI-FQEISQPSS-STTSSQYNWLYQLIINLNAGNVDNFNHWLSIAIKKAPILEQHQIFL 321
Query: 426 SLEETV 431
+ T+
Sbjct: 322 KEKLTI 327
>DICTYBASE|DDB_G0287005 [details] [associations]
symbol:DDB_G0287005 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0287005 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003743 EMBL:AAFI02000095 eggNOG:NOG253821 KO:K15030
HAMAP:MF_03012 RefSeq:XP_637434.1 STRING:Q54KZ8
EnsemblProtists:DDB0238518 GeneID:8625903 KEGG:ddi:DDB_G0287005
OMA:IQANKVT Uniprot:Q54KZ8
Length = 401
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 61/296 (20%), Positives = 136/296 (45%)
Query: 65 LYHKFVISFETKINPVSLMEIMEVITNHLSDQEEALVLLQSFEDKVKNNLEAKSLCKILQ 124
+ HK + E +IN VS +I + ++ H ++ + + + + + N+ + KS +
Sbjct: 82 ILHK--LENEDEINIVS-QKIRDSLSAHPTENSQLKIKILT---NLFNSFQPKSTQRY-D 134
Query: 125 AQMIMNKDADKPGSLDEVEKLIDEIELLVNDIEGVTAIHSRFYLVASTLYRKQAKLSLYY 184
+ K A +L+ V+ I +I+ + D + Y + S +++++ ++ L +
Sbjct: 135 IFFALVKLASDSNNLEFVKYQITDIDSWLEDWNVSIQQKRKLYKLISNIFKEKQRM-LSH 193
Query: 185 RTALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTP---N 241
+ ++YL D + + + A + + ++ +Y LL P + L+ + N
Sbjct: 194 QFLVKYLQTFTKED--SQEAQEDAVRVCIESISLQELYQSDYLLDLPAVQYLEGSTVSAN 251
Query: 242 AWLVELLRAFNAGDIEKF-ELMRPQWSAMNDIKANENKLSQKIALLCLMELAFKKIPGSH 300
+ EL++ F ++ F + + + ++ I + + QKI LL L L ++
Sbjct: 252 SLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLSNDDCLQKIRLLSLATLTSEQ----S 307
Query: 301 QLSFAEISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
++ ++ IS+ Q+ EVE +I A+ L+ +DQ++ NV RV +K Q
Sbjct: 308 KVPYSLISKMLQIDENEVEMWVINAMEGDLLDAKLDQLNRIVNVNSSTQRVFNKSQ 363
>UNIPROTKB|A4RK68 [details] [associations]
symbol:MGG_01595 "Eukaryotic translation initiation factor
3 subunit M" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003743 EMBL:CM001232 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OrthoDB:EOG441TM5 RefSeq:XP_003714574.1
STRING:A4RK68 EnsemblFungi:MGG_01595T0 GeneID:2679451
KEGG:mgr:MGG_01595 Uniprot:A4RK68
Length = 432
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 42/171 (24%), Positives = 84/171 (49%)
Query: 187 ALRYLGCVDLNDLTASDQVQHAFLIGLAALLADSVYNIGELLAHPILDSLQQTPNAWLVE 246
ALR D D T+ + Q A +A+ + + + ++ A P + +L ++ +
Sbjct: 195 ALRTFDSEDAEDYTSEEAQQLALRALRSAISSPTRLSFEDIRALPAVHALSESHPVHY-Q 253
Query: 247 LLRAFNAGDIEKFELMRPQWSAMNDIKANENK-LSQKIALLCLMELAFKKIPGSHQLSFA 305
LL+ F D++ ++ R + + + +N+ L +K+ LL LA + + ++S+
Sbjct: 254 LLQIFGEQDLDDYDDFREEHEGFIEKENLDNEVLYRKMRLLTFASLAAASMQ-TREISYN 312
Query: 306 EISEAAQLPLIEVEFLIIKALALGLVKGHIDQVDESFNVTWVQPRVLSKDQ 356
I++A Q+P +VE I + GLV+G + Q + F + V+ RV + Q
Sbjct: 313 SITKALQIPSEDVEMWAIDVIRAGLVEGKLSQKKKVFLIHSVRYRVFGEKQ 363
>ASPGD|ASPL0000017804 [details] [associations]
symbol:AN4259 species:162425 "Emericella nidulans"
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006413
"translational initiation" evidence=IEA] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 EMBL:BN001302 GO:GO:0003743 eggNOG:NOG253821
KO:K15030 HAMAP:MF_03012 OMA:IQANKVT EMBL:AACD01000069
RefSeq:XP_661863.1 EnsemblFungi:CADANIAT00004396 GeneID:2873678
KEGG:ani:AN4259.2 HOGENOM:HOG000234940 OrthoDB:EOG441TM5
Uniprot:Q5B5C1
Length = 459
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 45/154 (29%), Positives = 72/154 (46%)
Query: 214 AALLADSVYNIGELLAHPILDSLQQTPNAWLVELLRAFNAGDIEKFE---LMRPQWSAMN 270
+AL +V++ L A + +L+ + +A L ELL F A ++ +E P + +
Sbjct: 241 SALTHPAVFDFTPLTAADAVQALRSS-DAPLFELLEIFTADTLDAYEDFISATPVENILP 299
Query: 271 D--IKANENKLSQKIALLCLMELAFKKI----PGSHQLSFAEISEAAQLPLIEVEFLIIK 324
D + + L KI LL L LA P + LS+ I+ A ++P EVE +I
Sbjct: 300 DNALAPHAEALQTKIRLLTLASLAAAATTTTGPSARSLSYETIASALRVPQEEVEKWVID 359
Query: 325 ALALGLVKGHIDQVDESFNVTWVQPRVLSKDQLA 358
+ GLV+G + Q+ F V RV + Q A
Sbjct: 360 TIRAGLVEGKLSQLRSEFLVHRATYRVFGEKQWA 393
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 436 436 0.00088 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 614 (65 KB)
Total size of DFA: 248 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 37.53u 0.08s 37.61t Elapsed: 00:00:12
Total cpu time: 37.54u 0.08s 37.62t Elapsed: 00:00:13
Start: Thu Aug 15 14:38:57 2013 End: Thu Aug 15 14:39:10 2013