RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3725
(760 letters)
>d1xa6a3 g.49.1.1 (A:209-270) Beta-chimaerin, middle domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 85.1 bits (210), Expect = 5e-21
Identities = 23/61 (37%), Positives = 26/61 (42%)
Query: 208 SKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCPVPPDQT 267
K H F TF P C +C + M GL QGV C CG H C VP C +
Sbjct: 2 EKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRI 61
Query: 268 K 268
K
Sbjct: 62 K 62
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus)
[TaxId: 10117]}
Length = 66
Score = 80.9 bits (199), Expect = 2e-19
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 203 RHDRSSKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCPV 262
+ D H+F +++SPT C+HC SL+ GL QG+ C C H C VP C V
Sbjct: 1 QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHRRCVRSVPSLCGV 60
Query: 263 PPDQTKR 269
D T+R
Sbjct: 61 --DHTER 65
>d1ptqa_ g.49.1.1 (A:) Protein kinase C-delta (PKCdelta) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 50
Score = 78.6 bits (193), Expect = 6e-19
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 211 HQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSC 260
H+F + SPT C+HC SL+ GL +QG+ C+ CG H C +KV C
Sbjct: 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50
>d1r79a_ g.49.1.1 (A:) Diacylglycerol kinase delta {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 77.8 bits (191), Expect = 3e-18
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Query: 184 ASSRSNLSELTIDQMNNMLRHDRSSKHHQFITRTFTSPTKCNHCTSLMVGLTR-QGVVCD 242
SS S+ + L + + D + HQ++ KC C + R Q C
Sbjct: 1 GSSGSSGTTLASIGKDIIEDADGIAMPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCL 60
Query: 243 ICGFACHLSCCDKVPPSCPVPP 264
C H SC + + C P
Sbjct: 61 WCKAMVHTSCKESLLTKCSGPS 82
>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 52
Score = 66.5 bits (162), Expect = 1e-14
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 211 HQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSC 260
H F +TF C+ C ++ G C CG+ H C KVP C
Sbjct: 4 HNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMC 49
>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 49
Score = 62.9 bits (153), Expect = 2e-13
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 208 SKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPP 258
S H+F T+++ S CN C M GV C C CH C + P
Sbjct: 2 SVTHRFSTKSWLSQV-CNVCQKSM----IFGVKCKHCRLKCHNKCTKEAPA 47
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 44.9 bits (105), Expect = 3e-06
Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 19/125 (15%)
Query: 278 GIGTAYEGYV------KVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLV 331
G G +EGYV + W + ++ ++ Y + P +
Sbjct: 5 GAGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGE 64
Query: 332 LDMRDEDFAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWV 391
++ A+ I + + R+ + L+ A DTE ++WV
Sbjct: 65 PSYDLQNAAIE-------IASDYTKKKHVLRVKLA------NGALFLLQAHDDTEMSQWV 111
Query: 392 VALSE 396
+L
Sbjct: 112 TSLKA 116
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 44.9 bits (105), Expect = 3e-06
Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 18/131 (13%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNA-----LPAVYVSLVLDMRDED 338
EG++ K GG K W R++ ++ D L+ ++ + D+ L + + VLD R +
Sbjct: 8 EGWLL--KLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPN 65
Query: 339 -FAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSEL 397
F + + K + + + A S EK +W+ ++
Sbjct: 66 CFELYNPSHKGQVIKACKTEADGRVVEGN-------HVVYRISAPSPEEKEEWMKSIK-- 116
Query: 398 HRILKRNNLPN 408
+ R+ +
Sbjct: 117 -ASISRDPFYD 126
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 42.6 bits (99), Expect = 1e-05
Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 16/111 (14%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
+G + K G +K W + ++ + +L+ P P + L
Sbjct: 5 QGCLL--KQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHL--------RGCVV 54
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVAL 394
+ K + +F I T ++ L A + E+T+W+ A+
Sbjct: 55 TSVESNSNGRKSEEENLFEIIT-----ADEVHYFLQ-AATPKERTEWIKAI 99
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 40.3 bits (93), Expect = 1e-04
Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 12/114 (10%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
+GY+ K G +K W + V+ FL+ P + V +R +
Sbjct: 14 QGYLA--KQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGG---FSLRGSLVSALE 68
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSEL 397
IT H + A S E+ +W+ A+ +L
Sbjct: 69 DNGVPTGVKGNVQGNLFKVITKD-------DTHYYIQASSKAERAEWIEAIKKL 115
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 40.0 bits (92), Expect = 1e-04
Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 15/117 (12%)
Query: 280 GTAYEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDF 339
G +YEG + K G K W ++ V+ K L + + L +
Sbjct: 7 GRSYEGILY--KKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDL------AEV 58
Query: 340 AVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSE 396
+ D F + T+ + A +WV +
Sbjct: 59 EAVAPGTPTIGAPKTVDEKAFFDVKTT-------RRVYNFCAQDVPSAQQWVDRIQS 108
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 39.4 bits (91), Expect = 2e-04
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 21/112 (18%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
GY K G V K W R++ + + + + ++ L + + V +++
Sbjct: 6 AGYCV--KQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECK----- 58
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALS 395
+ +F I T ++ + ADS E W+ A+S
Sbjct: 59 -------QSDIMMRDNLFEIVT------TSRTFYVQ-ADSPEEMHSWIKAVS 96
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 39.2 bits (90), Expect = 2e-04
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 13/112 (11%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
+G++ + G +K G + V+ L Y ++ +V
Sbjct: 6 KGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEK-------------KYMLSVDN 52
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALS 395
++ DV T + + ++ E W +
Sbjct: 53 LKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFL 104
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 38.7 bits (89), Expect = 3e-04
Identities = 20/127 (15%), Positives = 38/127 (29%), Gaps = 22/127 (17%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
EGY+ K G V W +VV+ + + Y D + + + G
Sbjct: 8 EGYLV--KKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLK-------------G 52
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHRILKR 403
+ K + TT A E+ WV +++ + ++
Sbjct: 53 STLTSPCQDFGKRMFVFKITTTKQQ-------DHFFQAAFLEERDAWVRDINKAIKCIEG 105
Query: 404 NNLPNHT 410
+H
Sbjct: 106 LEHHHHH 112
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 39.1 bits (90), Expect = 3e-04
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 14/119 (11%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDED----- 338
++K+ G K W + + V+ L +Y + + V ++ +
Sbjct: 11 ADWLKI---RGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGF 67
Query: 339 -FAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSE 396
F + E + + IT P ++ ++ A S+++ W+ AL
Sbjct: 68 CFKLFHPLEQSIWAVKGPKGEAVGSITQ-----PLPSSYLIIRATSESDGRCWMDALEL 121
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 38.8 bits (89), Expect = 4e-04
Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 16/118 (13%)
Query: 280 GTAYEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDF 339
G G++K K + K W +++ V+ +L+ Y D +Y+
Sbjct: 7 GPIKMGWLK--KQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLP---------- 54
Query: 340 AVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLML-ADSDTEKTKWVVALSE 396
G ++ ++ +F I + D + +L A S E +WV L
Sbjct: 55 ---GCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRR 109
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 38.3 bits (88), Expect = 4e-04
Identities = 17/120 (14%), Positives = 30/120 (25%), Gaps = 20/120 (16%)
Query: 284 EGYV--KVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAV 341
+GY+ K W +++ VV + Y + +
Sbjct: 4 QGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHL-- 61
Query: 342 SGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHRIL 401
K C + + + A S E WV +S L + L
Sbjct: 62 ---------RRDSKKESCFELTS------QDRRTYEFT-ATSPAEARDWVDQISFLLKDL 105
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 36.5 bits (83), Expect = 0.002
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 16/120 (13%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
EG++ K G K W ++ ++ + F+ + E +
Sbjct: 10 EGWLH--KRGEYIKTWRPRYFLLKNDGTFIG-----------YKERPQDVDQREAPLNNF 56
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHRILKR 403
+ T++ P F I + T ++ E+ +W A+ + LK+
Sbjct: 57 SVAQCQLMKTERPRPNTFIIRC--LQWTTVIERTFH-VETPEEREEWTTAIQTVADGLKK 113
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 36.5 bits (83), Expect = 0.006
Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 20/116 (17%)
Query: 284 EGYV--KVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAV 341
GY+ + + W +++ + + Y D+ +
Sbjct: 107 AGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAID----------GY 156
Query: 342 SGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSEL 397
+ + KK C F I P + + A S + +WV L +
Sbjct: 157 DVRMNNTLRKDGKK--DCCFEICA-----PDKRIYQFT-AASPKDAEEWVQQLKFI 204
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 34.1 bits (77), Expect = 0.011
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 22/122 (18%)
Query: 274 DPTRGIGTAYEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLD 333
DP + G++ + + W R++ V+ LF Y S + + L +V +
Sbjct: 4 DPNLPV--HIRGWLHK-QDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLP---- 56
Query: 334 MRDEDFAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVA 393
+ F PG + + L AD+ + W+ A
Sbjct: 57 ---------SYNIRPDGPGAPRGRRFTFTAEH-----PGMRTYVLA-ADTLEDLRGWLRA 101
Query: 394 LS 395
L
Sbjct: 102 LG 103
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 33.6 bits (76), Expect = 0.017
Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 26/114 (22%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
EGY+ K GG+ K W ++ + +L +
Sbjct: 7 EGYLT--KQGGLVKTWKTRWFTLHRNELKYF-------------------KDQMSPEPIR 45
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLML-ADSDTEKTKWVVALSE 396
+ + A + D L+ T L A + E +W+ L
Sbjct: 46 ILDLTECSAVQFDYSQERVNCFCLV----FPFRTFYLCAKTGVEADEWIKILRW 95
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 33.0 bits (74), Expect = 0.023
Identities = 17/112 (15%), Positives = 30/112 (26%), Gaps = 23/112 (20%)
Query: 284 EGYV-KVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVS 342
GY+ KTG V W RQF L V L +D+ +
Sbjct: 8 AGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-------GDVAGGLAMDIDNCSVMAV 60
Query: 343 GVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVAL 394
+ +++ A+S + +W+ +
Sbjct: 61 DCEDRRYCFQITSFDGK---------------KSSILQAESKKDHEEWICTI 97
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 33.8 bits (76), Expect = 0.024
Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 18/115 (15%)
Query: 291 KTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSGVRESDVI 350
+ GG + W + +VV+ L+LY ++ + ++ D I
Sbjct: 19 RVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLID-----------I 67
Query: 351 HATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHRILKRNN 405
++ +FR+TTS L A+ + W+ + E + + +
Sbjct: 68 SYSETKRKNVFRLTTS-------DCECLFQAEDRDDMLAWIKTIQESSNLNEEDT 115
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus
aureus [TaxId: 1280]}
Length = 130
Score = 33.3 bits (75), Expect = 0.036
Identities = 14/102 (13%), Positives = 32/102 (31%), Gaps = 2/102 (1%)
Query: 185 SSRSNLSELTIDQMNNMLRHDRSSKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDIC 244
S+RS ++E ++ + S+ + + +
Sbjct: 13 SARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILK 72
Query: 245 GFACHLSCCDKVPPSCPV-PPDQTKRPLGI-DPTRGIGTAYE 284
++ C +CP+ PP+ K G DP + ++
Sbjct: 73 QSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQ 114
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 32.0 bits (71), Expect = 0.068
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 21/118 (17%)
Query: 284 EGYV--KVPKTGGVKK----GWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDE 337
EG++ K KK W + V+ + ++ Y + + + + + +++
Sbjct: 2 EGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKE- 60
Query: 338 DFAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALS 395
+V KK + N L A D E W+ A+S
Sbjct: 61 -------AICEVALDYKKKKHVFKLRLS-------DGNEYLFQAKDDEEMNTWIQAIS 104
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 31.5 bits (70), Expect = 0.079
Identities = 17/114 (14%), Positives = 30/114 (26%), Gaps = 22/114 (19%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
G + V W + V+ K++ + G
Sbjct: 4 NGILY--LEDPVNHEWYPHYFVLTSSKIYYS-------------------EETSSDLLRG 42
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLML-ADSDTEKTKWVVALSE 396
V + + R+ + P +L + ADS E WV + E
Sbjct: 43 VLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIRE 96
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 31.6 bits (70), Expect = 0.092
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 23/117 (19%)
Query: 280 GTAYEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDF 339
G+ GY+ ++ G KK W + V+ + L+ Y S D AL + + +D
Sbjct: 7 GSTMSGYLY--RSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE 64
Query: 340 AVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSE 396
+ + + AD +W+ A E
Sbjct: 65 --------------NSESKVFQLLHK-------GMVFYVFKADDAHSTQRWIDAFQE 100
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 30.6 bits (68), Expect = 0.13
Identities = 9/31 (29%), Positives = 10/31 (32%)
Query: 224 CNHCTSLMVGLTRQGVVCDICGFACHLSCCD 254
C C + V Q V C C H C
Sbjct: 19 CVVCRQMTVASGNQLVECQECHNLYHQDCHK 49
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 31.1 bits (69), Expect = 0.15
Identities = 17/103 (16%), Positives = 30/103 (29%), Gaps = 10/103 (9%)
Query: 296 KKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSGVRESDVIHATKK 355
K ++F V L S Y R + A +
Sbjct: 11 PKSMHKRFFV-------LRAASEAGGPARLEYYENEKKWRHKSSAPKRS--IPLESCFNI 61
Query: 356 DIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELH 398
+ + + ++ + ADS+ E+ W AL +LH
Sbjct: 62 NKRADSKNKHLVALYTRDEHFAIA-ADSEAEQDSWYQALLQLH 103
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 28.8 bits (64), Expect = 0.27
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 223 KCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCPVPPDQ 266
+C C G + ++CD C A HL C P VP +
Sbjct: 2 RCKVCRK--KGEDDKLILCDECNKAFHLFCLR--PALYEVPDGE 41
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 30.5 bits (68), Expect = 0.27
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
Query: 189 NLSELTIDQMNNMLRHDRSSKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFAC 248
+ + I ++ + L R + +C C + L VVC+ C
Sbjct: 23 TMEQERIGRLVDRLETMRKNVAGD-------GVNRCILCGEQLGMLGSASVVCEDCKKNV 75
Query: 249 HLSCCDKVPPSCPVP 263
C + + P P
Sbjct: 76 CTKCGVETSNNRPHP 90
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 31.0 bits (69), Expect = 0.32
Identities = 10/118 (8%), Positives = 33/118 (27%), Gaps = 8/118 (6%)
Query: 290 PKTGGVKKGWVRQFVVVCDFKLFLYDISPD-------RNALPAVYVSLVLDMRDEDFAVS 342
K + + ++ KL Y+ + + ++ ++ V + E
Sbjct: 15 QKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPP 74
Query: 343 GVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLML-ADSDTEKTKWVVALSELHR 399
+ + + L + + ++ + +W+ L + R
Sbjct: 75 ERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 30.4 bits (67), Expect = 0.35
Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 13/120 (10%)
Query: 284 EGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
G++ + + ++R++ ++ L + L ++ VS
Sbjct: 18 CGFLDI-EDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSI 76
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHRILKR 403
P F I + A+ + WV AL++ +
Sbjct: 77 ATPKQKPKT-----PFCFVINAL-------SQRYFLQANDQKDLKDWVEALNQASKSGPS 124
>d2h5na1 a.287.1.2 (A:1-132) Hypothetical protein PG1108
{Porphyromonas gingivalis [TaxId: 837]}
Length = 132
Score = 30.1 bits (67), Expect = 0.38
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 89 AKTQISEELSKTRSELIAAQKEICDFRLKMESVSMDLRRKDS----QLKELQSRLESGDI 144
AK+ + + +E+ +E F + + V + L+ DS Q L +R++
Sbjct: 25 AKSMVMADGKIKPAEIAVMTREFMRFGILQDQVDLLLKASDSIEASQAVALIARMDE--- 81
Query: 145 LERPASQISYLDHFLKESRHTGSVESEDGDIEDNRVP--SIASSRSNLSELTI-DQMNNM 201
ER SYL G + + DGDI+DN + ++ S+ L +T+ + +NNM
Sbjct: 82 -ERKKYVASYL----------GVIMASDGDIDDNELALWTLISTLCGLPTMTVMEAINNM 130
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 72
Score = 28.5 bits (63), Expect = 0.48
Identities = 7/28 (25%), Positives = 10/28 (35%), Gaps = 2/28 (7%)
Query: 239 VVCDICGFACHLSCCDKVPPSCPVPPDQ 266
+ CD CG H C + P +
Sbjct: 32 LACDGCGVWHHTRCIG--INNADALPSK 57
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 28.5 bits (63), Expect = 0.50
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 220 SPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCPVPPDQ 266
S +C C + CD+C H C + P+ Q
Sbjct: 5 SSGQCGACGE-SYAADEFWICCDLCEMWFHGKCVK-ITPARAEHIKQ 49
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia
proto-oncoprotein PML {Human (Homo sapiens) [TaxId:
9606]}
Length = 56
Score = 27.9 bits (62), Expect = 0.68
Identities = 6/39 (15%), Positives = 11/39 (28%), Gaps = 5/39 (12%)
Query: 224 CNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCPV 262
C C + + + C C + CP+
Sbjct: 9 CQQCQAEA----KCPKLLP-CLHTLCSGCLEASGMQCPI 42
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 29.2 bits (64), Expect = 0.69
Identities = 11/118 (9%), Positives = 30/118 (25%), Gaps = 20/118 (16%)
Query: 284 EGYV--KVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAV 341
GY+ + + W +++ + + Y D+ + +
Sbjct: 12 AGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNT--- 68
Query: 342 SGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSELHR 399
+ + P + + A S + +WV L + +
Sbjct: 69 --------------LRKDGKKDCCFEICAPDKRIYQFT-AASPKDAEEWVQQLKFILQ 111
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 27.6 bits (61), Expect = 0.77
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 239 VVCDICGFACHLSCCDKVPPSCP 261
+ CD C + H+ C + P P
Sbjct: 22 LCCDTCPSSYHIHCLNPPLPEIP 44
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing
protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 28.7 bits (63), Expect = 0.79
Identities = 12/112 (10%), Positives = 35/112 (31%), Gaps = 22/112 (19%)
Query: 285 GYVKVPKTGGVKKGWVRQFVVV-CDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSG 343
G +++ ++G + W + + L+ ++ +
Sbjct: 5 GPLRLSESG---ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRT-----------IPLPS 50
Query: 344 VRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALS 395
+ S + D ++++ + K + A S + +W+ LS
Sbjct: 51 CKLSVPDPEERLDSGHVWKLQWA-------KQSWYLSASSAELQQQWLETLS 95
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 89
Score = 28.3 bits (63), Expect = 0.99
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Query: 202 LRHDRSSKHHQFITRTFTSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCDKVPPSCP 261
++H + H+ + T C+ C + CD C F H C
Sbjct: 30 VKH-VLHEEHE-LELTRVQVYTCDKCEEEGTIWSYH---CDECDFDLHAKCALNEDTKES 84
Query: 262 VPP 264
P
Sbjct: 85 GPS 87
>d2bzea1 b.34.21.1 (A:345-476) RNA polymerase-associated protein
RTF1 homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 132
Score = 29.0 bits (65), Expect = 1.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 445 RYVQIARVGDTKKIYQMDYIPEEQLLVVLAGKQ-RYVRLVPVRALDGDEVEWVK 497
R +I V +T K+YQ+ + L + G R RL V + E E++K
Sbjct: 49 RVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMK 102
>d1ccva_ g.22.1.1 (A:) Chymotrypsin inhibitor AMCI {Honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 56
Score = 27.1 bits (60), Expect = 1.1
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 244 CGFACHLSCCDKVPPSCPVP 263
CG AC +C C +
Sbjct: 12 CGSACAPTCAQPKTRICTMQ 31
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 28.6 bits (63), Expect = 1.4
Identities = 9/122 (7%), Positives = 26/122 (21%), Gaps = 18/122 (14%)
Query: 284 EGYVKV------PKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDE 337
EG ++ G W + +++ A + + +
Sbjct: 21 EGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSA- 79
Query: 338 DFAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSEL 397
+ + + F + ++ +K WV +
Sbjct: 80 -----IIEVRTTMPLEMPEKDNTFVLKVE------NGAEYILETIDSLQKHSWVADIQGC 128
Query: 398 HR 399
Sbjct: 129 VD 130
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 26.9 bits (59), Expect = 1.7
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 239 VVCDICGFACHLSCCDKVPPSCPVPPDQ 266
V+C+ C F HL C P VP ++
Sbjct: 20 VMCNQCEFCFHLDCHL--PALQDVPGEE 45
Score = 25.7 bits (56), Expect = 4.6
Identities = 6/30 (20%), Positives = 11/30 (36%), Gaps = 4/30 (13%)
Query: 239 VVCDICGFACHLSCCDKVP----PSCPVPP 264
+C +C L C++ C +P
Sbjct: 8 TICRVCQKPGDLVMCNQCEFCFHLDCHLPA 37
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for
secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 28.1 bits (61), Expect = 1.9
Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 16/116 (13%)
Query: 280 GTAYEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDF 339
G + GY+ V K W ++F V+ + + + R + ++
Sbjct: 7 GMKHSGYLWA-IGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKA--------EPQELLQ 57
Query: 340 AVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALS 395
+ + F +D + ++ WV A+
Sbjct: 58 LDGYTVDYTDPQPGLEGGRAFFNAVK------EGDTVIFA-SDDEQDRILWVQAMY 106
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 27.2 bits (59), Expect = 2.4
Identities = 16/100 (16%), Positives = 24/100 (24%), Gaps = 21/100 (21%)
Query: 295 VKKGWVRQFVVVCDFKLFLYDISPDRNALPAVYVSLVLDMRDEDFAVSGVRESDVIHATK 354
V W ++ V D L Y + + +V+
Sbjct: 11 VNSQWKSRWCSVRDNHLHFYQDR---------------NRSKVAQQPLSLVGCEVVPDPS 55
Query: 355 KDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVAL 394
D FRI + A S E W+ L
Sbjct: 56 PDHLYSFRILHKGE------ELAKLEAKSSEEMGHWLGLL 89
>d2fx0a2 a.121.1.1 (A:77-198) Hemolysin II regulatory protein,
HlyIIR {Bacillus cereus [TaxId: 1396]}
Length = 122
Score = 27.5 bits (61), Expect = 2.5
Identities = 7/36 (19%), Positives = 14/36 (38%)
Query: 532 QIILYEITRTKTRHKRLHEVILPTLAQCIHIFSEGR 567
+ EI + R +++ + + Q I EG
Sbjct: 26 TLAYEEIIKESARLEKIKPYFIGSFEQLKEILQEGE 61
>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange
factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId:
9606]}
Length = 140
Score = 27.7 bits (61), Expect = 2.9
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 13/118 (11%)
Query: 283 YEGYVKVPKTGGVKKGWVRQFVVVCDFKLFLYDISPDR----NALPAVYVSLVLDMRDED 338
+EG + K +++ D + L ++ AV S
Sbjct: 27 HEGPLT--WRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPV 84
Query: 339 FAVSGVRESDVIHATKKDIPCIFRITTSLMDPPGTKNHTLMLADSDTEKTKWVVALSE 396
++ V +I + D F I TS + PP + + L+ A + ++K W+ L E
Sbjct: 85 LKLNAV----LIRSVATDKRAFFIICTSKLGPP--QIYELV-ALTSSDKNTWMELLEE 135
>d1jb0c_ d.58.1.2 (C:) Photosystem I iron-sulfur protein PsaC
{Synechococcus elongatus [TaxId: 32046]}
Length = 80
Score = 26.6 bits (58), Expect = 3.4
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 241 CDICGFACHLSCCDKVPPSCPVPPDQTKRPLGIDPTRGIGTAY 283
C C C+ CP + LG + TR +G AY
Sbjct: 47 CVGCK------RCETA---CPTDFLSIRVYLGAETTRSMGLAY 80
>d2phcb1 b.62.1.4 (B:86-217) Uncharacterized protein PH0987
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 132
Score = 26.8 bits (59), Expect = 4.7
Identities = 11/72 (15%), Positives = 20/72 (27%), Gaps = 6/72 (8%)
Query: 241 CDICGFACHLSCCDKVPPSCPVPPDQTKRPLGIDPTRGIGTAYEGYVKVPKTGGVKKGWV 300
GF + + P + R + GI G+ + G GW
Sbjct: 40 VYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPG----GW- 94
Query: 301 RQFVVVCDFKLF 312
+ + + F
Sbjct: 95 -RIIGRIPLRTF 105
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine
herpesvirus 1 [TaxId: 10326]}
Length = 68
Score = 25.3 bits (55), Expect = 5.8
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 7/47 (14%)
Query: 219 TSPTKCNHCTSLMVGLTRQGVVCDICGFACHLSCCD---KVPPSCPV 262
T +C C + C A C + P+CP+
Sbjct: 3 TVAERCPICLEDP----SNYSMALPCLHAFCYVCITRWIRQNPTCPL 45
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.394
Gapped
Lambda K H
0.267 0.0589 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,728,204
Number of extensions: 130019
Number of successful extensions: 334
Number of sequences better than 10.0: 1
Number of HSP's gapped: 323
Number of HSP's successfully gapped: 55
Length of query: 760
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 668
Effective length of database: 1,144,436
Effective search space: 764483248
Effective search space used: 764483248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.0 bits)