Your job contains 1 sequence.
>psy3727
MRPVSGGFGRPAPYDRNDRFGGANRFGGGSGPGPIRGGPPRGGFRGGFNNDRWNDRPGGF
AGPRPGGRWVNESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEA
DVDFATHEDAMQAMSKDRTNMQHRYIELFLNSSSPRGGVGGSGSIGGFGGSGGGRLGGFG
GSDPSSPFERRNPNQAYVENTALSRSAVKDRAINVQLCPYHRHSRPKAPCLN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3727
(232 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5F3D2 - symbol:HNRNPH3 "Uncharacterized protei... 263 1.2e-24 2
ZFIN|ZDB-GENE-060421-3878 - symbol:zgc:136953 "zgc:136953... 262 2.1e-24 2
ZFIN|ZDB-GENE-040426-1856 - symbol:hnrnph1 "heterogeneous... 257 4.8e-24 2
ZFIN|ZDB-GENE-030131-275 - symbol:hnrnph1l "heterogeneous... 253 1.8e-23 2
UNIPROTKB|E1BB17 - symbol:HNRNPH3 "Uncharacterized protei... 269 2.3e-23 1
UNIPROTKB|F1P8D3 - symbol:HNRNPH3 "Uncharacterized protei... 269 2.3e-23 1
UNIPROTKB|P31942 - symbol:HNRNPH3 "Heterogeneous nuclear ... 269 2.3e-23 1
RGD|1310019 - symbol:Hnrnph3 "heterogeneous nuclear ribon... 269 2.3e-23 1
UNIPROTKB|G3MYE8 - symbol:G3MYE8 "Uncharacterized protein... 269 2.3e-23 1
UNIPROTKB|B4DHY1 - symbol:HNRNPH3 "cDNA FLJ57726, highly ... 269 2.3e-23 1
UNIPROTKB|F5GZT4 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 2.1e-22 1
UNIPROTKB|H0YB39 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 2.1e-22 1
UNIPROTKB|H0YBD7 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 2.1e-22 1
UNIPROTKB|H0YBG7 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 2.1e-22 1
UNIPROTKB|I3L816 - symbol:HNRNPH1 "Uncharacterized protei... 260 4.3e-22 1
UNIPROTKB|E9PCY7 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 4.7e-22 1
UNIPROTKB|E2R8D6 - symbol:E2R8D6 "Uncharacterized protein... 260 5.3e-22 1
UNIPROTKB|P31943 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 6.0e-22 1
UNIPROTKB|F2Z5H9 - symbol:HNRNPH1 "Uncharacterized protei... 260 6.0e-22 1
MGI|MGI:1891925 - symbol:Hnrnph1 "heterogeneous nuclear r... 260 6.0e-22 1
UNIPROTKB|G3V9Q3 - symbol:Hnrph1 "Heterogeneous nuclear r... 260 6.0e-22 1
UNIPROTKB|E1BF20 - symbol:HNRNPH1 "Uncharacterized protei... 260 7.4e-22 1
UNIPROTKB|G8JLB6 - symbol:HNRNPH1 "Heterogeneous nuclear ... 260 7.4e-22 1
RGD|620840 - symbol:Hnrph1 "heterogeneous nuclear ribonuc... 259 7.7e-22 1
UNIPROTKB|Q8VHV7 - symbol:Hnrnph1 "Heterogeneous nuclear ... 259 7.7e-22 1
UNIPROTKB|E2RB90 - symbol:HNRNPF "Uncharacterized protein... 257 8.4e-22 1
UNIPROTKB|Q5E9J1 - symbol:HNRNPF "Heterogeneous nuclear r... 257 8.4e-22 1
UNIPROTKB|P52597 - symbol:HNRNPF "Heterogeneous nuclear r... 257 8.5e-22 1
UNIPROTKB|Q60HC3 - symbol:HNRNPF "Heterogeneous nuclear r... 257 8.5e-22 1
MGI|MGI:2138741 - symbol:Hnrnpf "heterogeneous nuclear ri... 257 8.5e-22 1
RGD|620366 - symbol:Hnrnpf "heterogeneous nuclear ribonuc... 257 8.5e-22 1
UNIPROTKB|F1NBV8 - symbol:HNRNPH1 "Uncharacterized protei... 260 8.6e-22 1
UNIPROTKB|F1LRK4 - symbol:Grsf1 "Protein Grsf1" species:1... 254 9.0e-22 1
RGD|1310858 - symbol:Grsf1 "G-rich RNA sequence binding f... 254 9.0e-22 1
UNIPROTKB|F1NJJ4 - symbol:HNRNPH1 "Uncharacterized protei... 260 9.1e-22 1
UNIPROTKB|F1NJJ5 - symbol:HNRNPH1 "Uncharacterized protei... 260 1.0e-21 1
UNIPROTKB|F1NEG6 - symbol:HNRNPH1 "Uncharacterized protei... 260 1.0e-21 1
UNIPROTKB|F1RG16 - symbol:HNRNPF "Uncharacterized protein... 254 1.9e-21 1
UNIPROTKB|F1P8D4 - symbol:HNRNPH1 "Uncharacterized protei... 251 1.9e-21 1
UNIPROTKB|I3L687 - symbol:HNRNPH2 "Uncharacterized protei... 255 1.9e-21 1
UNIPROTKB|P55795 - symbol:HNRNPH2 "Heterogeneous nuclear ... 255 2.2e-21 1
MGI|MGI:1201779 - symbol:Hnrnph2 "heterogeneous nuclear r... 255 2.2e-21 1
RGD|1549784 - symbol:Hnrnph2 "heterogeneous nuclear ribon... 255 2.2e-21 1
UNIPROTKB|A5D9B4 - symbol:HNRPH2 "Heterogeneous nuclear r... 255 2.2e-21 1
UNIPROTKB|Q3SZF3 - symbol:HNRNPH2 "Heterogeneous nuclear ... 255 2.2e-21 1
UNIPROTKB|E2RJH5 - symbol:HNRNPH2 "Uncharacterized protei... 255 2.2e-21 1
MGI|MGI:106479 - symbol:Grsf1 "G-rich RNA sequence bindin... 254 3.6e-21 1
UNIPROTKB|F1LMB8 - symbol:Grsf1 "Protein Grsf1" species:1... 254 3.6e-21 1
UNIPROTKB|F1Q0B7 - symbol:GRSF1 "Uncharacterized protein"... 247 4.9e-21 1
UNIPROTKB|F5H5I6 - symbol:GRSF1 "G-rich sequence factor 1... 243 1.3e-20 1
UNIPROTKB|A6QPB2 - symbol:GRSF1 "Uncharacterized protein"... 242 1.7e-20 1
UNIPROTKB|H0Y8R1 - symbol:GRSF1 "G-rich sequence factor 1... 243 3.4e-20 1
UNIPROTKB|F1MZF0 - symbol:GRSF1 "Uncharacterized protein"... 242 3.5e-20 1
UNIPROTKB|H0YAK1 - symbol:GRSF1 "G-rich sequence factor 1... 243 4.8e-20 1
UNIPROTKB|F1RUP2 - symbol:GRSF1 "Uncharacterized protein"... 243 5.9e-20 1
UNIPROTKB|Q12849 - symbol:GRSF1 "G-rich sequence factor 1... 243 5.9e-20 1
UNIPROTKB|E1BMP6 - symbol:E1BMP6 "Uncharacterized protein... 230 9.7e-19 1
UNIPROTKB|F1LV61 - symbol:F1LV61 "Uncharacterized protein... 224 4.2e-18 1
ZFIN|ZDB-GENE-060825-196 - symbol:grsf1 "G-rich RNA seque... 196 5.2e-15 1
UNIPROTKB|F2Z5W4 - symbol:LOC100737162 "Uncharacterized p... 189 6.9e-15 1
FB|FBgn0259139 - symbol:glo "glorund" species:7227 "Droso... 176 2.5e-14 2
UNIPROTKB|G3N1Y9 - symbol:G3N1Y9 "Uncharacterized protein... 181 2.6e-13 1
UNIPROTKB|F1NWS6 - symbol:GRSF1 "Uncharacterized protein"... 167 8.2e-12 1
UNIPROTKB|I3L8F5 - symbol:I3L8F5 "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|I3LFQ0 - symbol:HNRNPH3 "Uncharacterized protei... 151 7.4e-11 1
WB|WBGene00022253 - symbol:hrpf-2 species:6239 "Caenorhab... 159 1.2e-10 1
UNIPROTKB|H0YBK1 - symbol:HNRNPH1 "Heterogeneous nuclear ... 144 4.1e-10 1
WB|WBGene00020936 - symbol:hrpf-1 species:6239 "Caenorhab... 153 4.6e-10 1
UNIPROTKB|D6RBM0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 137 2.2e-09 1
UNIPROTKB|E5RGV0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 137 2.2e-09 1
ZFIN|ZDB-GENE-070112-1732 - symbol:esrp1 "epithelial spli... 135 5.3e-09 2
UNIPROTKB|I3L5T6 - symbol:I3L5T6 "Uncharacterized protein... 138 1.2e-08 1
UNIPROTKB|Q9Y4C8 - symbol:RBM19 "Probable RNA-binding pro... 140 2.5e-08 1
UNIPROTKB|F1RKD1 - symbol:RBM19 "Uncharacterized protein"... 140 2.5e-08 1
TAIR|locus:2156897 - symbol:AT5G66010 species:3702 "Arabi... 130 2.9e-08 1
UNIPROTKB|F1PQY5 - symbol:ESRP1 "Uncharacterized protein"... 121 5.3e-08 2
RGD|1560481 - symbol:Esrp1 "epithelial splicing regulator... 123 6.7e-08 2
MGI|MGI:1917326 - symbol:Esrp1 "epithelial splicing regul... 123 6.8e-08 2
UNIPROTKB|F1LP81 - symbol:Esrp1 "Epithelial-splicing regu... 123 6.8e-08 2
UNIPROTKB|Q6DEZ7 - symbol:esrp1 "Epithelial splicing regu... 119 7.1e-08 2
UNIPROTKB|Q7ZY29 - symbol:esrp1 "Epithelial splicing regu... 119 7.1e-08 2
UNIPROTKB|F1PSN8 - symbol:ESRP1 "Uncharacterized protein"... 121 9.1e-08 2
ZFIN|ZDB-GENE-030131-9824 - symbol:esrp2 "epithelial spli... 133 9.9e-08 1
WB|WBGene00006367 - symbol:sym-2 species:6239 "Caenorhabd... 132 1.0e-07 1
UNIPROTKB|F1MVN3 - symbol:ESRP1 "Uncharacterized protein"... 121 1.1e-07 2
UNIPROTKB|Q5ZLR4 - symbol:ESRP2 "Epithelial splicing regu... 132 1.2e-07 1
UNIPROTKB|F1RY52 - symbol:ESRP1 "Uncharacterized protein"... 121 1.2e-07 2
UNIPROTKB|E2RRF5 - symbol:RBM19 "Uncharacterized protein"... 133 1.4e-07 1
UNIPROTKB|F1P509 - symbol:ESRP1 "Uncharacterized protein"... 115 2.3e-07 2
UNIPROTKB|D6R9T0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RAM1 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RDU3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RFM3 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RIH9 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RIT2 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RIU0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|D6RJ04 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
UNIPROTKB|E7EQJ0 - symbol:HNRNPH1 "Heterogeneous nuclear ... 115 4.8e-07 1
RGD|1308928 - symbol:Rbm19 "RNA binding motif protein 19"... 123 5.8e-07 1
UNIPROTKB|H0YBR2 - symbol:ESRP1 "Epithelial-splicing regu... 123 6.9e-07 1
WARNING: Descriptions of 40 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q5F3D2 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:AADN02028014 EMBL:AJ851718 IPI:IPI00573787
RefSeq:NP_001012610.1 UniGene:Gga.22904 SMR:Q5F3D2
Ensembl:ENSGALT00000006294 GeneID:423686 KEGG:gga:423686
InParanoid:Q5F3D2 NextBio:20826120 Uniprot:Q5F3D2
Length = 342
Score = 263 (97.6 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 51/75 (68%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THEDA+ AMSK
Sbjct: 198 HFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHEDAVAAMSK 256
Query: 137 DRTNMQHRYIELFLN 151
D+ +MQHRYIELFLN
Sbjct: 257 DKNHMQHRYIELFLN 271
Score = 143 (55.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/90 (36%), Positives = 53/90 (58%)
Query: 69 WVNESSGPSRHT-----VHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGE 119
W + +GP+ T V +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GE
Sbjct: 3 WTGKHNGPTDTTNDGTVVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQ-GRSTGE 61
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 AFVQFASKEIAENALGKHKERIGHRYIEIF 91
Score = 33 (16.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 6/9 (66%), Positives = 6/9 (66%)
Query: 7 GFGRPAPYD 15
G RP PYD
Sbjct: 110 GQQRPGPYD 118
>ZFIN|ZDB-GENE-060421-3878 [details] [associations]
symbol:zgc:136953 "zgc:136953" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060421-3878 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
OrthoDB:EOG49P9ZV EMBL:BX530068 IPI:IPI00485717 UniGene:Dr.76052
Ensembl:ENSDART00000057651 Ensembl:ENSDART00000113082
Uniprot:B8A5E1
Length = 396
Score = 262 (97.3 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 55/84 (65%), Positives = 64/84 (76%)
Query: 71 NES-SG-PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATH 127
N+S SG S H VHMRGLPFRA E DVA FF P+ PV V I NG+ +GEADV+F +H
Sbjct: 280 NDSNSGFHSGHFVHMRGLPFRATESDVAHFFGPLTPVRVHIDMGPNGKSTGEADVEFRSH 339
Query: 128 EDAMQAMSKDRTNMQHRYIELFLN 151
EDA+ AMSKD+ +MQHRYIELFLN
Sbjct: 340 EDAVSAMSKDKNHMQHRYIELFLN 363
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 69 WVNESSGPSRHT------VHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSG 118
WV + SGP+ + + +RGLPF ++ ++ FF +VP + + + Y+ GR +G
Sbjct: 92 WVLKRSGPTDYDGSSGCMLRLRGLPFGCSKEEIVQFFSGLKIVPNGITLPMDYQ-GRSTG 150
Query: 119 EADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
EA V FA+ E A +A+ K + + HRYIE+F
Sbjct: 151 EAFVQFASKEIAEKALGKHKERIGHRYIEIF 181
Score = 135 (52.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 79 HTVHMRGLPFRANERDVADFFRP---VVPVH-VDIHY-ENGRPSGEADVDFATHEDAMQA 133
+ V +RGLP+ + +VA FF V V+ V + + GRPSGEA V+ + ED +A
Sbjct: 8 YVVRIRGLPWSCTQEEVASFFSDCDIVGKVNGVCFTFSKEGRPSGEAFVELKSSEDFKKA 67
Query: 134 MSKDRTNMQHRYIELF 149
++KDR M HRYIE+F
Sbjct: 68 LAKDRKYMGHRYIEVF 83
Score = 33 (16.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 10 RPAPYD 15
RP+PYD
Sbjct: 202 RPSPYD 207
>ZFIN|ZDB-GENE-040426-1856 [details] [associations]
symbol:hnrnph1 "heterogeneous nuclear
ribonucleoprotein H1" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040426-1856 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 CTD:3187 KO:K12898 InterPro:IPR012996
Pfam:PF08080 EMBL:CU855621 EMBL:CU658205 EMBL:BC065439
IPI:IPI00489200 RefSeq:NP_991247.1 UniGene:Dr.17640 SMR:Q6P0V0
Ensembl:ENSDART00000059918 GeneID:402984 KEGG:dre:402984
NextBio:20816791 Uniprot:Q6P0V0
Length = 403
Score = 257 (95.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V + +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 251 HCVHMRGLPYRATETDIYNFFSPLNPVRVHLEIGPDGRVTGEADVEFATHEDAVAAMSKD 310
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 311 KANMQHRYVELFLN 324
Score = 135 (52.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY---ENGRPSGEADVDFATHEDAMQAMS 135
V +RGLP+ + +V FF + IH+ GRPSGEA V+F + ED A+
Sbjct: 9 VRVRGLPWSCSVDEVQRFFSECKIASNGTSIHFTYTREGRPSGEAFVEFESEEDLKIAVK 68
Query: 136 KDRTNMQHRYIELF 149
KDR M HRY+E+F
Sbjct: 69 KDRETMGHRYVEVF 82
Score = 132 (51.5 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 69 WVNESSGPS-RHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP+ T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 91 WVLKHTGPNCPETGGDGLVRLRGLPFGCSKEEIVQFFAGLEIVPNGITLPVDFQGRSTGE 150
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ + A +A+ K + + HRYIE+F
Sbjct: 151 AFVQFASQDIAEKALKKHKERIGHRYIEIF 180
Score = 37 (18.1 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 7 GFGRPAPYD 15
G RP+PYD
Sbjct: 199 GMQRPSPYD 207
>ZFIN|ZDB-GENE-030131-275 [details] [associations]
symbol:hnrnph1l "heterogeneous nuclear
ribonucleoprotein H1, like" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-275
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC044161 IPI:IPI00512644 RefSeq:NP_997754.1
UniGene:Dr.782 ProteinModelPortal:Q803W8 SMR:Q803W8 STRING:Q803W8
PRIDE:Q803W8 GeneID:321556 KEGG:dre:321556 CTD:321556
InParanoid:Q803W8 NextBio:20807425 ArrayExpress:Q803W8 Bgee:Q803W8
Uniprot:Q803W8
Length = 407
Score = 253 (94.1 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 48/74 (64%), Positives = 58/74 (78%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMS D
Sbjct: 254 HCVHMRGLPYRATEPDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSND 313
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 314 KANMQHRYVELFLN 327
Score = 132 (51.5 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 69 WVNESSGPS-RHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP+ T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 91 WVLKHTGPNCPETEGDGLVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 150
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ + A +A+ K + + HRYIE+F
Sbjct: 151 AFVQFASQDIAEKALKKHKERIGHRYIEIF 180
Score = 126 (49.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 81 VHMRGLPFRANERDVADFFR--PVVPVHVDIHY---ENGRPSGEADVDFATHEDAMQAMS 135
V +RGLP+ + +V+ FF + IH+ GRPSGEA V+ + +D A+
Sbjct: 9 VRVRGLPWSCSAEEVSRFFSGCKISSNGSAIHFTYTREGRPSGEAFVELESEDDLKIAVK 68
Query: 136 KDRTNMQHRYIELF 149
KDR +M HRY+E+F
Sbjct: 69 KDRESMGHRYVEVF 82
Score = 37 (18.1 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 8/14 (57%), Positives = 8/14 (57%)
Query: 3 PVSG-GFGRPAPYD 15
P G G RP PYD
Sbjct: 194 PRKGMGMQRPGPYD 207
>UNIPROTKB|E1BB17 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 OMA:PYDRPLG
EMBL:DAAA02061815 IPI:IPI00696173 ProteinModelPortal:E1BB17
SMR:E1BB17 PRIDE:E1BB17 Ensembl:ENSBTAT00000019039 Uniprot:E1BB17
Length = 346
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 188 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 246
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLN 268
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 WVNESSGP---SRHTVHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGEAD 121
WV + +GP S TV +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GEA
Sbjct: 3 WVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQ-GRSTGEAF 61
Query: 122 VDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 VQFASKEIAENALGKHKERIGHRYIEIF 89
>UNIPROTKB|F1P8D3 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OMA:PYDRPLG
EMBL:AAEX03002774 RefSeq:XP_536369.2 ProteinModelPortal:F1P8D3
Ensembl:ENSCAFT00000000525 GeneID:479227 KEGG:cfa:479227
Uniprot:F1P8D3
Length = 346
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 188 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 246
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLN 268
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 WVNESSGP---SRHTVHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGEAD 121
WV + +GP S TV +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GEA
Sbjct: 3 WVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQ-GRSTGEAF 61
Query: 122 VDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 VQFASKEIAENALGKHKERIGHRYIEIF 89
>UNIPROTKB|P31942 [details] [associations]
symbol:HNRNPH3 "Heterogeneous nuclear ribonucleoprotein H3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=NAS]
[GO:0003723 "RNA binding" evidence=NAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 EMBL:CH471083
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 GO:GO:0000398
eggNOG:NOG262593 HOVERGEN:HBG055557 KO:K12898 EMBL:L32610
EMBL:AF132360 EMBL:AF132361 EMBL:AF132362 EMBL:AF132363
EMBL:AF132364 EMBL:AK091411 EMBL:AK291547 EMBL:AL117395
EMBL:BC004511 EMBL:BC039824 IPI:IPI00013877 IPI:IPI00216492
IPI:IPI00216493 IPI:IPI00216494 IPI:IPI00216495 IPI:IPI00216496
PIR:T17207 RefSeq:NP_036339.1 RefSeq:NP_067676.2 UniGene:Hs.643472
ProteinModelPortal:P31942 SMR:P31942 IntAct:P31942
MINT:MINT-5004191 STRING:P31942 PhosphoSite:P31942 DMDM:23503095
PaxDb:P31942 PRIDE:P31942 Ensembl:ENST00000265866
Ensembl:ENST00000354695 GeneID:3189 KEGG:hsa:3189 UCSC:uc001jnw.4
UCSC:uc001jnx.4 CTD:3189 GeneCards:GC10P070090 HGNC:HGNC:5043
HPA:HPA038264 MIM:602324 neXtProt:NX_P31942 PharmGKB:PA162391325
InParanoid:P31942 OMA:PYDRPLG OrthoDB:EOG49P9ZV PhylomeDB:P31942
ChiTaRS:HNRNPH3 GenomeRNAi:3189 NextBio:12680 ArrayExpress:P31942
Bgee:P31942 CleanEx:HS_HNRNPH3 Genevestigator:P31942
GermOnline:ENSG00000096746 Uniprot:P31942
Length = 346
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 188 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 246
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLN 268
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 WVNESSGP---SRHTVHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGEAD 121
WV + +GP S TV +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GEA
Sbjct: 3 WVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQ-GRSTGEAF 61
Query: 122 VDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 VQFASKEIAENALGKHKERIGHRYIEIF 89
>RGD|1310019 [details] [associations]
symbol:Hnrnph3 "heterogeneous nuclear ribonucleoprotein H3
(2H9)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:1310019 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 EMBL:CH473988
GeneTree:ENSGT00620000087736 KO:K12898 CTD:3189 OrthoDB:EOG49P9ZV
IPI:IPI00372854 RefSeq:NP_001102002.1 UniGene:Rn.60652 SMR:D4ABK7
Ensembl:ENSRNOT00000032600 GeneID:361838 KEGG:rno:361838
UCSC:RGD:1310019 NextBio:677788 Uniprot:D4ABK7
Length = 346
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 188 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 246
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 247 AVAAMSKDKNNMQHRYIELFLN 268
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 WVNESSGP---SRHTVHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGEAD 121
WV + +GP S TV +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GEA
Sbjct: 3 WVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQ-GRSTGEAF 61
Query: 122 VDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 VQFASKEIAENALGKHKERIGHRYIEIF 89
>UNIPROTKB|G3MYE8 [details] [associations]
symbol:G3MYE8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02039421 Ensembl:ENSBTAT00000065600 OMA:EVPRRIM
Uniprot:G3MYE8
Length = 248
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 90 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 148
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 149 AVAAMSKDKNNMQHRYIELFLN 170
>UNIPROTKB|B4DHY1 [details] [associations]
symbol:HNRNPH3 "cDNA FLJ57726, highly similar to
Heterogeneous nuclear ribonucleoprotein H3" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
UniGene:Hs.643472 HGNC:HGNC:5043 ChiTaRS:HNRNPH3 EMBL:AC016395
EMBL:AK295316 IPI:IPI00908651 SMR:B4DHY1 STRING:B4DHY1
Ensembl:ENST00000441000 UCSC:uc010qiv.2 Uniprot:B4DHY1
Length = 238
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/82 (67%), Positives = 64/82 (78%)
Query: 73 SSG-PSRHTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHED 129
SSG H VHMRGLPFRA E D+A+FF P+ P VH+DI + GR +GEADV+F THED
Sbjct: 80 SSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIRVHIDIGAD-GRATGEADVEFVTHED 138
Query: 130 AMQAMSKDRTNMQHRYIELFLN 151
A+ AMSKD+ NMQHRYIELFLN
Sbjct: 139 AVAAMSKDKNNMQHRYIELFLN 160
>UNIPROTKB|F5GZT4 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 IPI:IPI00983613
ProteinModelPortal:F5GZT4 SMR:F5GZT4 PRIDE:F5GZT4
Ensembl:ENST00000511300 UCSC:uc011dgn.2 ArrayExpress:F5GZT4
Bgee:F5GZT4 Uniprot:F5GZT4
Length = 159
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 19 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 78
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 79 KANMQHRYVELFLN 92
>UNIPROTKB|H0YB39 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
PRIDE:H0YB39 Ensembl:ENST00000521173 Bgee:H0YB39 Uniprot:H0YB39
Length = 277
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 164 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 223
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 224 KANMQHRYVELFLN 237
>UNIPROTKB|H0YBD7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
PRIDE:H0YBD7 Ensembl:ENST00000523921 Bgee:H0YBD7 Uniprot:H0YBD7
Length = 195
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 103 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 162
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 163 KANMQHRYVELFLN 176
>UNIPROTKB|H0YBG7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 PRIDE:H0YBG7
Ensembl:ENST00000519033 Bgee:H0YBG7 Uniprot:H0YBG7
Length = 185
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 45 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 104
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 105 KANMQHRYVELFLN 118
>UNIPROTKB|I3L816 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU915704
Ensembl:ENSSSCT00000031735 Uniprot:I3L816
Length = 423
Score = 260 (96.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 288 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 347
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 348 KANMQHRYVELFLN 361
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 94 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 153
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 154 AFVQFASQEIAEKALKKHKERIGHRYIEIF 183
Score = 115 (45.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 4 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 63
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 64 DEVKLALKKDRETMGHRYVEVF 85
>UNIPROTKB|E9PCY7 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 IPI:IPI00908896
ProteinModelPortal:E9PCY7 SMR:E9PCY7 PRIDE:E9PCY7
Ensembl:ENST00000510411 ArrayExpress:E9PCY7 Bgee:E9PCY7
Uniprot:E9PCY7
Length = 429
Score = 260 (96.6 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|E2R8D6 [details] [associations]
symbol:E2R8D6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AAEX03007686
Ensembl:ENSCAFT00000000520 Uniprot:E2R8D6
Length = 439
Score = 260 (96.6 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|P31943 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0043484 "regulation of RNA splicing" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0008266 "poly(U) RNA binding" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] Reactome:REACT_71
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0008266 GO:GO:0000166
GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0043484
GO:GO:0000398 GO:GO:0071013 EMBL:CH471165 eggNOG:NOG262593
HOGENOM:HOG000220896 HOVERGEN:HBG055557 EMBL:L22009 EMBL:CR456778
EMBL:AK124530 EMBL:BC001348 IPI:IPI00013881 PIR:I39358
RefSeq:NP_001244222.1 RefSeq:NP_005511.1 UniGene:Hs.604001 PDB:2LXU
PDBsum:2LXU ProteinModelPortal:P31943 SMR:P31943 IntAct:P31943
MINT:MINT-1160934 STRING:P31943 PhosphoSite:P31943 DMDM:1710632
REPRODUCTION-2DPAGE:IPI00013881 REPRODUCTION-2DPAGE:P31943
PaxDb:P31943 PRIDE:P31943 Ensembl:ENST00000356731
Ensembl:ENST00000393432 Ensembl:ENST00000442819 GeneID:3187
KEGG:hsa:3187 UCSC:uc003mke.4 CTD:3187 GeneCards:GC05M179043
HGNC:HGNC:5041 HPA:HPA001359 HPA:HPA016884 MIM:601035
neXtProt:NX_P31943 PharmGKB:PA162391284 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 GenomeRNAi:3187 NextBio:12670 ArrayExpress:P31943
Bgee:P31943 CleanEx:HS_HNRNPH1 Genevestigator:P31943
GermOnline:ENSG00000169045 InterPro:IPR012996 Pfam:PF08080
Uniprot:P31943
Length = 449
Score = 260 (96.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|F2Z5H9 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0071013 GeneTree:ENSGT00620000087736 CTD:3187
KO:K12898 InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:CU915704
RefSeq:XP_003123691.1 UniGene:Ssc.13767 ProteinModelPortal:F2Z5H9
SMR:F2Z5H9 PRIDE:F2Z5H9 Ensembl:ENSSSCT00000015317 GeneID:100519535
KEGG:ssc:100519535 Uniprot:F2Z5H9
Length = 449
Score = 260 (96.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>MGI|MGI:1891925 [details] [associations]
symbol:Hnrnph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1891925 GO:GO:0005654 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 CTD:3187 KO:K12898 OrthoDB:EOG4CRM03
ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080 EMBL:Y14196
EMBL:BC056224 IPI:IPI00133916 RefSeq:NP_067485.1 UniGene:Mm.21740
ProteinModelPortal:O35737 SMR:O35737 IntAct:O35737 STRING:O35737
PhosphoSite:O35737 REPRODUCTION-2DPAGE:IPI00133916
REPRODUCTION-2DPAGE:O35737 PaxDb:O35737 PRIDE:O35737 DNASU:59013
Ensembl:ENSMUST00000069304 Ensembl:ENSMUST00000109142 GeneID:59013
KEGG:mmu:59013 NextBio:314564 Bgee:O35737 Genevestigator:O35737
GermOnline:ENSMUSG00000007850 Uniprot:O35737
Length = 449
Score = 260 (96.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 AEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|G3V9Q3 [details] [associations]
symbol:Hnrph1 "Heterogeneous nuclear ribonucleoprotein H1,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0043484 "regulation of RNA
splicing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 EMBL:CH473948
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
UniGene:Rn.23677 ProteinModelPortal:G3V9Q3 SMR:G3V9Q3 PRIDE:G3V9Q3
Ensembl:ENSRNOT00000059190 Uniprot:G3V9Q3
Length = 449
Score = 260 (96.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 AEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|E1BF20 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:DAAA02018972
IPI:IPI00734138 Ensembl:ENSBTAT00000012357 Uniprot:E1BF20
Length = 472
Score = 260 (96.6 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|G8JLB6 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0015629
"actin cytoskeleton" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
InterPro:IPR012996 Pfam:PF08080 ProteinModelPortal:G8JLB6
SMR:G8JLB6 PRIDE:G8JLB6 Ensembl:ENST00000329433 OMA:FSECKIQ
PhylomeDB:G8JLB6 Bgee:G8JLB6 Uniprot:G8JLB6
Length = 472
Score = 260 (96.6 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 137 (53.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>RGD|620840 [details] [associations]
symbol:Hnrph1 "heterogeneous nuclear ribonucleoprotein H1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:620840 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0005681 GO:GO:0003723 GO:GO:0006396 GO:GO:0043484
eggNOG:NOG262593 HSSP:P55795 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 InterPro:IPR012996 Pfam:PF08080
EMBL:AF367468 EMBL:AABR03073723 EMBL:BC129087 IPI:IPI00202027
IPI:IPI00851133 IPI:IPI00851145 RefSeq:NP_543172.1 UniGene:Rn.23677
ProteinModelPortal:Q8VHV7 SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7
PhosphoSite:Q8VHV7 World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7
GeneID:140931 KEGG:rno:140931 UCSC:RGD:620840 CTD:140931
NextBio:620799 ArrayExpress:Q8VHV7 Genevestigator:Q8VHV7
Uniprot:Q8VHV7
Length = 449
Score = 259 (96.2 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 141 (54.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF +E ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 AEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|Q8VHV7 [details] [associations]
symbol:Hnrnph1 "Heterogeneous nuclear ribonucleoprotein H"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 RGD:620840 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
GO:GO:0006396 GO:GO:0043484 eggNOG:NOG262593 HSSP:P55795
HOGENOM:HOG000220896 HOVERGEN:HBG055557 KO:K12898
InterPro:IPR012996 Pfam:PF08080 EMBL:AF367468 EMBL:AABR03073723
EMBL:BC129087 IPI:IPI00202027 IPI:IPI00851133 IPI:IPI00851145
RefSeq:NP_543172.1 UniGene:Rn.23677 ProteinModelPortal:Q8VHV7
SMR:Q8VHV7 IntAct:Q8VHV7 STRING:Q8VHV7 PhosphoSite:Q8VHV7
World-2DPAGE:0004:Q8VHV7 PRIDE:Q8VHV7 GeneID:140931 KEGG:rno:140931
UCSC:RGD:620840 CTD:140931 NextBio:620799 ArrayExpress:Q8VHV7
Genevestigator:Q8VHV7 Uniprot:Q8VHV7
Length = 449
Score = 259 (96.2 bits), Expect = 7.7e-22, P = 7.7e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIETGPDGRVTGEADVEFATHEDAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 349 KANMQHRYVELFLN 362
Score = 141 (54.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF +E ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSEEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 AEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 50 (22.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 142 QHRYIELFLN 151
+HRY+ELFLN
Sbjct: 373 EHRYVELFLN 382
>UNIPROTKB|E2RB90 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0003727 Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0071013
GeneTree:ENSGT00620000087736 KO:K12898 InterPro:IPR012996
Pfam:PF08080 CTD:3185 OMA:SDCTIRD EMBL:AAEX03015383
RefSeq:XP_848697.1 RefSeq:XP_856894.1 RefSeq:XP_856973.1
ProteinModelPortal:E2RB90 Ensembl:ENSCAFT00000011299 GeneID:477757
KEGG:cfa:477757 NextBio:20853178 Uniprot:E2RB90
Length = 414
Score = 257 (95.5 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 133 (51.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP S T V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRPVVPVH---VDIHY---ENGRPSGEADVDFATHE 128
G V +RGLP+ + DV +F +H +H+ GR SGEA V+ + +
Sbjct: 7 GGEGFVVKLRGLPWSCSVEDVQNFLSDCT-IHDGAAGVHFIYTREGRQSGEAFVELESED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKMALKKDRESMGHRYIEVF 86
>UNIPROTKB|Q5E9J1 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9913 "Bos taurus" [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
GO:GO:0008380 GO:GO:0000166 GO:GO:0003727 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484 HSSP:Q9Z2X1
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 EMBL:BT020929 EMBL:BC102955
IPI:IPI00685278 RefSeq:NP_001014860.1 UniGene:Bt.23170
ProteinModelPortal:Q5E9J1 SMR:Q5E9J1 STRING:Q5E9J1 PRIDE:Q5E9J1
Ensembl:ENSBTAT00000011658 GeneID:506917 KEGG:bta:506917 CTD:3185
eggNOG:NOG326351 InParanoid:Q5E9J1 OMA:SDCTIRD NextBio:20867801
Uniprot:Q5E9J1
Length = 414
Score = 257 (95.5 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 132 (51.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP S T V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 128 (50.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 32/81 (39%), Positives = 43/81 (53%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRP------VVPVHVDIHYENGRPSGEADVDFATHE 128
G V +RGLP+ + DV +F V VH I+ GR SGEA V+ + +
Sbjct: 7 GGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHF-IYTREGRQSGEAFVELESED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKLALKKDRESMGHRYIEVF 86
>UNIPROTKB|P52597 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043484 "regulation of RNA splicing" evidence=IDA;IMP]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
Gene3D:3.30.70.330 GO:GO:0043484 GO:GO:0000398 GO:GO:0071013
EMBL:CH471160 EMBL:AL512654 HOGENOM:HOG000220896 HOVERGEN:HBG055557
HPA:HPA001359 HPA:HPA016884 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:L28010 EMBL:AK001364 EMBL:BC001432 EMBL:BC004254
EMBL:BC015580 EMBL:BC016736 EMBL:BC106008 IPI:IPI00003881
PIR:S43484 RefSeq:NP_001091674.1 RefSeq:NP_001091675.1
RefSeq:NP_001091676.1 RefSeq:NP_001091677.1 RefSeq:NP_001091678.1
RefSeq:NP_004957.1 UniGene:Hs.712955 UniGene:Hs.808 PDB:2HGL
PDB:2HGM PDB:2HGN PDB:2KFY PDB:2KG0 PDB:2KG1 PDB:3TFY PDBsum:2HGL
PDBsum:2HGM PDBsum:2HGN PDBsum:2KFY PDBsum:2KG0 PDBsum:2KG1
PDBsum:3TFY ProteinModelPortal:P52597 SMR:P52597 IntAct:P52597
MINT:MINT-1157890 STRING:P52597 PhosphoSite:P52597 DMDM:1710628
OGP:P52597 PaxDb:P52597 PeptideAtlas:P52597 PRIDE:P52597 DNASU:3185
Ensembl:ENST00000337970 Ensembl:ENST00000356053
Ensembl:ENST00000357065 Ensembl:ENST00000443950
Ensembl:ENST00000544000 GeneID:3185 KEGG:hsa:3185 UCSC:uc001jar.2
GeneCards:GC10M043881 HGNC:HGNC:5039 MIM:601037 neXtProt:NX_P52597
PharmGKB:PA162391271 InParanoid:P52597 PhylomeDB:P52597
ChiTaRS:HNRNPF EvolutionaryTrace:P52597 GenomeRNAi:3185
NextBio:12654 ArrayExpress:P52597 Bgee:P52597 CleanEx:HS_HNRNPF
Genevestigator:P52597 GermOnline:ENSG00000169813 Uniprot:P52597
Length = 415
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRPVVPVH---VDIHY---ENGRPSGEADVDFATHE 128
G V +RGLP+ + DV +F +H +H+ GR SGEA V+ + +
Sbjct: 7 GGEGFVVKLRGLPWSCSVEDVQNFLSDCT-IHDGAAGVHFIYTREGRQSGEAFVELGSED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKMALKKDRESMGHRYIEVF 86
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 69 WVNESSGPSRHT------VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP+ V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
>UNIPROTKB|Q60HC3 [details] [associations]
symbol:HNRNPF "Heterogeneous nuclear ribonucleoprotein F"
species:9541 "Macaca fascicularis" [GO:0003727 "single-stranded RNA
binding" evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HOVERGEN:HBG055557 InterPro:IPR012996 Pfam:PF08080
EMBL:AB125204 EMBL:AB168246 ProteinModelPortal:Q60HC3 SMR:Q60HC3
PRIDE:Q60HC3 Uniprot:Q60HC3
Length = 415
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRPVVPVH---VDIHY---ENGRPSGEADVDFATHE 128
G V +RGLP+ + DV +F +H +H+ GR SGEA V+ + +
Sbjct: 7 GGEGFVVKLRGLPWSCSVEDVQNFLSDCT-IHDGAAGVHFIYTREGRQSGEAFVELGSED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKMALKKDRESMGHRYIEVF 86
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 69 WVNESSGPSRHT------VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP+ V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
>MGI|MGI:2138741 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2138741
GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0003727
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0043484
HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD ChiTaRS:HNRNPF EMBL:AK076478 EMBL:BC018185
EMBL:BC025481 EMBL:BC027003 EMBL:BC029163 EMBL:BC029764
EMBL:BC033483 EMBL:BC089313 IPI:IPI00226073 IPI:IPI00798511
RefSeq:NP_001159899.1 RefSeq:NP_001159900.1 RefSeq:NP_001159901.1
RefSeq:NP_001159902.1 RefSeq:NP_001159903.1 RefSeq:NP_001159904.1
RefSeq:NP_598595.1 UniGene:Mm.422979 UniGene:Mm.476420 PDB:2DB1
PDBsum:2DB1 ProteinModelPortal:Q9Z2X1 SMR:Q9Z2X1 IntAct:Q9Z2X1
STRING:Q9Z2X1 PhosphoSite:Q9Z2X1 REPRODUCTION-2DPAGE:Q9Z2X1
PaxDb:Q9Z2X1 PRIDE:Q9Z2X1 Ensembl:ENSMUST00000035493
Ensembl:ENSMUST00000163168 Ensembl:ENSMUST00000167182
Ensembl:ENSMUST00000167657 Ensembl:ENSMUST00000170346
Ensembl:ENSMUST00000180020 Ensembl:ENSMUST00000180341 GeneID:98758
KEGG:mmu:98758 UCSC:uc009dle.2 InParanoid:Q9Z2X1
EvolutionaryTrace:Q9Z2X1 NextBio:353639 Bgee:Q9Z2X1
Genevestigator:Q9Z2X1 GermOnline:ENSMUSG00000042079 Uniprot:Q9Z2X1
Length = 415
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRP------VVPVHVDIHYENGRPSGEADVDFATHE 128
G + V +RGLP+ + DV +F V VH I+ GR SGEA V+ + +
Sbjct: 7 GGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHF-IYTREGRQSGEAFVELESED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKLALKKDRESMGHRYIEVF 86
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 69 WVNESSGPSRHT------VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP+ V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
>RGD|620366 [details] [associations]
symbol:Hnrnpf "heterogeneous nuclear ribonucleoprotein F"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0043484 "regulation of RNA splicing"
evidence=ISO;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:620366 GO:GO:0005634 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
GO:GO:0003727 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0043484 HSSP:Q9Z2X1 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3185 eggNOG:NOG326351
OMA:SDCTIRD EMBL:AB022209 EMBL:BC097275 EMBL:BC103634
IPI:IPI00210357 RefSeq:NP_001032362.1 RefSeq:NP_001032363.1
RefSeq:NP_001032364.1 RefSeq:NP_071792.1 UniGene:Rn.144596
ProteinModelPortal:Q794E4 SMR:Q794E4 IntAct:Q794E4 STRING:Q794E4
PhosphoSite:Q794E4 PRIDE:Q794E4 Ensembl:ENSRNOT00000019529
GeneID:64200 KEGG:rno:64200 UCSC:RGD:620366 InParanoid:Q794E4
NextBio:612884 Genevestigator:Q794E4 GermOnline:ENSRNOG00000014562
Uniprot:Q794E4
Length = 415
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATHE+A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRP------VVPVHVDIHYENGRPSGEADVDFATHE 128
G + V +RGLP+ + DV +F V VH I+ GR SGEA V+ + +
Sbjct: 7 GGEGYVVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHF-IYTREGRQSGEAFVELESED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKLALKKDRESMGHRYIEVF 86
Score = 130 (50.8 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 69 WVNESSGPSRHT------VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP+ V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
>UNIPROTKB|F1NBV8 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00589313
Ensembl:ENSGALT00000009575 ArrayExpress:F1NBV8 Uniprot:F1NBV8
Length = 492
Score = 260 (96.6 bits), Expect = 8.6e-22, P = 8.6e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 312 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 371
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 372 KANMQHRYVELFLN 385
Score = 137 (53.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 125 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 184
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 185 AFVQFASQEIAEKALKKHKERIGHRYIEIF 214
Score = 124 (48.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 79 HTVHMRGLPFRANERDVADFFRP--VVPVHVDIHY---ENGRPSGEADVDFATHEDAMQA 133
+ V +RGLP+ + +V FF ++ + I + GRPSGEA + + ED A
Sbjct: 41 YVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESEEDVKLA 100
Query: 134 MSKDRTNMQHRYIELF 149
+ KDR M HRY+E+F
Sbjct: 101 LKKDRETMGHRYVEVF 116
>UNIPROTKB|F1LRK4 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 GeneTree:ENSGT00620000087736
IPI:IPI00364208 PRIDE:F1LRK4 Ensembl:ENSRNOT00000004551
ArrayExpress:F1LRK4 Uniprot:F1LRK4
Length = 361
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 76 PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAM 134
PS H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 279 PSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAM 338
Query: 135 SKDRTNMQHRYIELFLN 151
KDR+++QHRYIELFLN
Sbjct: 339 LKDRSHVQHRYIELFLN 355
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 133 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 192
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 193 EEIGNRYIEIF 203
>RGD|1310858 [details] [associations]
symbol:Grsf1 "G-rich RNA sequence binding factor 1"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 CTD:2926 eggNOG:NOG319259
HOGENOM:HOG000220896 OrthoDB:EOG4XPQGW IPI:IPI00364208
EMBL:BC103654 RefSeq:NP_001094360.1 UniGene:Rn.66912 GeneID:305256
KEGG:rno:305256 UCSC:RGD:1310858 InParanoid:Q3SYP9 NextBio:654276
ArrayExpress:Q3SYP9 Genevestigator:Q3SYP9 Uniprot:Q3SYP9
Length = 142
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 76 PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAM 134
PS H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 60 PSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAM 119
Query: 135 SKDRTNMQHRYIELFLN 151
KDR+++QHRYIELFLN
Sbjct: 120 LKDRSHVQHRYIELFLN 136
>UNIPROTKB|F1NJJ4 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00684493
Ensembl:ENSGALT00000034274 ArrayExpress:F1NJJ4 Uniprot:F1NJJ4
Length = 499
Score = 260 (96.6 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 319 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 378
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 379 KANMQHRYVELFLN 392
Score = 137 (53.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 125 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 184
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 185 AFVQFASQEIAEKALKKHKERIGHRYIEIF 214
Score = 124 (48.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 79 HTVHMRGLPFRANERDVADFFRP--VVPVHVDIHY---ENGRPSGEADVDFATHEDAMQA 133
+ V +RGLP+ + +V FF ++ + I + GRPSGEA + + ED A
Sbjct: 41 YVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESEEDVKLA 100
Query: 134 MSKDRTNMQHRYIELF 149
+ KDR M HRY+E+F
Sbjct: 101 LKKDRETMGHRYVEVF 116
>UNIPROTKB|F1NJJ5 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:AADN02028603 EMBL:AADN02028604
EMBL:AADN02028605 EMBL:AADN02028590 EMBL:AADN02028591
EMBL:AADN02028592 EMBL:AADN02028593 EMBL:AADN02028594
EMBL:AADN02028595 EMBL:AADN02028596 EMBL:AADN02028597
EMBL:AADN02028598 EMBL:AADN02028599 EMBL:AADN02028600
EMBL:AADN02028601 EMBL:AADN02028602 IPI:IPI00679403
Ensembl:ENSGALT00000034273 ArrayExpress:F1NJJ5 Uniprot:F1NJJ5
Length = 519
Score = 260 (96.6 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 339 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 398
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 399 KANMQHRYVELFLN 412
Score = 137 (53.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 145 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 204
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 205 AFVQFASQEIAEKALKKHKERIGHRYIEIF 234
Score = 124 (48.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 79 HTVHMRGLPFRANERDVADFFRP--VVPVHVDIHY---ENGRPSGEADVDFATHEDAMQA 133
+ V +RGLP+ + +V FF ++ + I + GRPSGEA + + ED A
Sbjct: 61 YVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESEEDVKLA 120
Query: 134 MSKDRTNMQHRYIELF 149
+ KDR M HRY+E+F
Sbjct: 121 LKKDRETMGHRYVEVF 136
>UNIPROTKB|F1NEG6 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:FSECKIQ EMBL:AADN02028603
EMBL:AADN02028604 EMBL:AADN02028605 EMBL:AADN02028590
EMBL:AADN02028591 EMBL:AADN02028592 EMBL:AADN02028593
EMBL:AADN02028594 EMBL:AADN02028595 EMBL:AADN02028596
EMBL:AADN02028597 EMBL:AADN02028598 EMBL:AADN02028599
EMBL:AADN02028600 EMBL:AADN02028601 EMBL:AADN02028602
IPI:IPI00823306 Ensembl:ENSGALT00000040330 ArrayExpress:F1NEG6
Uniprot:F1NEG6
Length = 521
Score = 260 (96.6 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ +FF P+ PV V I +GR +GEADV+FATHEDA+ AMSKD
Sbjct: 341 HCVHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKD 400
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 401 KANMQHRYVELFLN 414
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 145 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 204
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 205 AFVQFASQEIAEKALKKHKERIGHRYIEIF 234
Score = 124 (48.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 79 HTVHMRGLPFRANERDVADFFRP--VVPVHVDIHY---ENGRPSGEADVDFATHEDAMQA 133
+ V +RGLP+ + +V FF ++ + I + GRPSGEA + + ED A
Sbjct: 61 YVVKVRGLPWSCSTEEVQRFFSDCKILNGALGIRFIYTREGRPSGEAFAELESEEDVKLA 120
Query: 134 MSKDRTNMQHRYIELF 149
+ KDR M HRY+E+F
Sbjct: 121 LKKDRETMGHRYVEVF 136
>UNIPROTKB|F1RG16 [details] [associations]
symbol:HNRNPF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
KO:K12898 InterPro:IPR012996 Pfam:PF08080 CTD:3185 OMA:SDCTIRD
EMBL:CU468599 RefSeq:XP_001929089.1 RefSeq:XP_003359253.1
RefSeq:XP_003483523.1 UniGene:Ssc.93755 Ensembl:ENSSSCT00000011169
GeneID:100155475 KEGG:ssc:100155475 Uniprot:F1RG16
Length = 414
Score = 254 (94.5 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP++A E D+ +FF P+ PV V I +GR +GEADV+FATH++A+ AMSKD
Sbjct: 289 HCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHDEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R NMQHRYIELFLN
Sbjct: 349 RANMQHRYIELFLN 362
Score = 133 (51.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 34/90 (37%), Positives = 51/90 (56%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + SGP S T V +RGLPF + ++ FF +VP + + + G+ +GE
Sbjct: 95 WVLKHSGPNSADTANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQELAEKALGKHKERIGHRYIEVF 184
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/81 (38%), Positives = 42/81 (51%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRP------VVPVHVDIHYENGRPSGEADVDFATHE 128
G V +RGLP+ + DV +F VH I+ GR SGEA V+ + +
Sbjct: 7 GGEGFVVKLRGLPWSCSVEDVQNFLSDCTIRDGAAGVHF-IYTREGRQSGEAFVELESED 65
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ KDR +M HRYIE+F
Sbjct: 66 DVKMALKKDRESMGHRYIEVF 86
>UNIPROTKB|F1P8D4 [details] [associations]
symbol:HNRNPH1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
EMBL:AAEX03018089 Ensembl:ENSCAFT00000000519 OMA:THEDAGA
Uniprot:F1P8D4
Length = 193
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 49/74 (66%), Positives = 56/74 (75%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VHMRGLP+RA E D+ FF P+ PV V I GR +GEADV+FATHEDA AMSKD
Sbjct: 88 HCVHMRGLPYRATENDIYIFFSPLNPVRVHIEIGPGGRVAGEADVEFATHEDAGAAMSKD 147
Query: 138 RTNMQHRYIELFLN 151
+ NMQHRY+ELFLN
Sbjct: 148 KANMQHRYVELFLN 161
>UNIPROTKB|I3L687 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 OMA:MEANMTI
Ensembl:ENSSSCT00000030700 Uniprot:I3L687
Length = 437
Score = 255 (94.8 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 277 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 335
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 336 DKANMQHRYVELFLN 350
Score = 115 (45.5 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 106 (42.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/89 (37%), Positives = 47/89 (52%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYENGRPSGEA 120
WV + +GP S T V +RGLPF ++ ++ FF +VP NG EA
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVP--------NGX---EA 143
Query: 121 DVDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A +A+ K + + HRYIE+F
Sbjct: 144 FVQFASQEIAEKALKKHKERIGHRYIEIF 172
Score = 42 (19.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 362 HSYVELFLN 370
>UNIPROTKB|P55795 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
GO:GO:0000166 GO:GO:0015629 Reactome:REACT_1675 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 EMBL:U78027 EMBL:AL035422 GO:GO:0000398
EMBL:CH471115 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 HPA:HPA001359 HPA:HPA016884 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:U01923 EMBL:BC130343 EMBL:BC130345 IPI:IPI00026230
RefSeq:NP_001027565.1 RefSeq:NP_062543.1 UniGene:Hs.432485 PDB:1WEZ
PDB:1WG5 PDBsum:1WEZ PDBsum:1WG5 ProteinModelPortal:P55795
SMR:P55795 IntAct:P55795 MINT:MINT-2804293 STRING:P55795
PhosphoSite:P55795 DMDM:2500576 REPRODUCTION-2DPAGE:IPI00026230
PaxDb:P55795 PeptideAtlas:P55795 PRIDE:P55795 DNASU:3188
Ensembl:ENST00000316594 GeneID:3188 KEGG:hsa:3188 UCSC:uc004ehm.3
GeneCards:GC0XP100663 HGNC:HGNC:5042 HPA:CAB004436 MIM:300610
neXtProt:NX_P55795 PharmGKB:PA162391316 InParanoid:P55795
OMA:MEANMTI PhylomeDB:P55795 EvolutionaryTrace:P55795
GenomeRNAi:3188 NextBio:12674 ArrayExpress:P55795 Bgee:P55795
CleanEx:HS_HNRNPH2 Genevestigator:P55795 GermOnline:ENSG00000126945
Uniprot:P55795
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 118 (46.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
E+ A+ KDR M HRY+E+F
Sbjct: 65 EEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>MGI|MGI:1201779 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1201779
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:U58105 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 GeneTree:ENSGT00620000087736 KO:K12898
OrthoDB:EOG4CRM03 InterPro:IPR012996 Pfam:PF08080 CTD:3188
EMBL:AK077716 EMBL:AK164115 EMBL:AK168116 EMBL:AK169104
EMBL:BC005461 IPI:IPI00108143 RefSeq:NP_063921.1 UniGene:Mm.315909
ProteinModelPortal:P70333 SMR:P70333 STRING:P70333
PhosphoSite:P70333 PaxDb:P70333 PRIDE:P70333 DNASU:56258
Ensembl:ENSMUST00000050331 Ensembl:ENSMUST00000059297
Ensembl:ENSMUST00000074950 Ensembl:ENSMUST00000113202
Ensembl:ENSMUST00000113203 GeneID:56258 KEGG:mmu:56258
InParanoid:P70333 NextBio:312148 Bgee:P70333 Genevestigator:P70333
GermOnline:ENSMUSG00000045427 Uniprot:P70333
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 117 (46.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>RGD|1549784 [details] [associations]
symbol:Hnrnph2 "heterogeneous nuclear ribonucleoprotein H2 (H')"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1549784 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 GO:GO:0015629
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593
HSSP:P55795 HOGENOM:HOG000220896 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 KO:K12898 OrthoDB:EOG4CRM03
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI EMBL:BC079240
IPI:IPI00464512 RefSeq:NP_001014041.1 UniGene:Rn.229731
ProteinModelPortal:Q6AY09 SMR:Q6AY09 IntAct:Q6AY09 STRING:Q6AY09
PhosphoSite:Q6AY09 PRIDE:Q6AY09 Ensembl:ENSRNOT00000015518
GeneID:308650 KEGG:rno:308650 UCSC:RGD:1549784 InParanoid:Q6AY09
NextBio:659306 Genevestigator:Q6AY09 Uniprot:Q6AY09
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 117 (46.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSAEEVMRFFSDCKIQNGTSGVRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>UNIPROTKB|A5D9B4 [details] [associations]
symbol:HNRPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 eggNOG:NOG262593 HOVERGEN:HBG055557
GeneTree:ENSGT00620000087736 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 IPI:IPI00696405 UniGene:Bt.8355 OMA:MEANMTI
EMBL:DAAA02070773 EMBL:DAAA02070774 EMBL:BT030533 SMR:A5D9B4
Ensembl:ENSBTAT00000009864 InParanoid:A5D9B4 Uniprot:A5D9B4
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>UNIPROTKB|Q3SZF3 [details] [associations]
symbol:HNRNPH2 "Heterogeneous nuclear ribonucleoprotein H2"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 eggNOG:NOG262593 HOGENOM:HOG000220896
HOVERGEN:HBG055557 KO:K12898 OrthoDB:EOG4CRM03 InterPro:IPR012996
Pfam:PF08080 EMBL:BC102894 IPI:IPI00696405 RefSeq:NP_001069476.1
UniGene:Bt.8355 ProteinModelPortal:Q3SZF3 SMR:Q3SZF3 PRIDE:Q3SZF3
GeneID:534001 KEGG:bta:534001 CTD:3188 InParanoid:Q3SZF3
NextBio:20876226 Uniprot:Q3SZF3
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>UNIPROTKB|E2RJH5 [details] [associations]
symbol:HNRNPH2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0015629 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 GeneTree:ENSGT00620000087736 KO:K12898
InterPro:IPR012996 Pfam:PF08080 CTD:3188 OMA:MEANMTI
EMBL:AAEX03026717 RefSeq:XP_861916.1 RefSeq:XP_862053.2
Ensembl:ENSCAFT00000028063 GeneID:480989 KEGG:cfa:480989
Uniprot:E2RJH5
Length = 449
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP+RA E D+ +FF P+ P VH++I +GR +GEADV+FATHEDA+ AM+K
Sbjct: 289 HCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIG-PDGRVTGEADVEFATHEDAVAAMAK 347
Query: 137 DRTNMQHRYIELFLN 151
D+ NMQHRY+ELFLN
Sbjct: 348 DKANMQHRYVELFLN 362
Score = 135 (52.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVD-----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGREGFVVKVRGLPWSCSADEVMRFFSDCKIQNGTSGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 143 HRYIELFLN 151
H Y+ELFLN
Sbjct: 374 HSYVELFLN 382
>MGI|MGI:106479 [details] [associations]
symbol:Grsf1 "G-rich RNA sequence binding factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:106479 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016331 CTD:2926
eggNOG:NOG319259 HOGENOM:HOG000220896 HOVERGEN:HBG055557
OrthoDB:EOG4XPQGW EMBL:AK044889 EMBL:AK045986 EMBL:AK077782
IPI:IPI00453582 RefSeq:NP_848815.2 UniGene:Mm.332474
ProteinModelPortal:Q8C5Q4 SMR:Q8C5Q4 STRING:Q8C5Q4
PhosphoSite:Q8C5Q4 PaxDb:Q8C5Q4 PRIDE:Q8C5Q4 DNASU:231413
Ensembl:ENSMUST00000078945 GeneID:231413 KEGG:mmu:231413
UCSC:uc008yab.1 GeneTree:ENSGT00620000087736 InParanoid:Q8C5Q4
OMA:LSFFSDC NextBio:380544 Bgee:Q8C5Q4 CleanEx:MM_GRSF1
Genevestigator:Q8C5Q4 GermOnline:ENSMUSG00000044221 Uniprot:Q8C5Q4
Length = 479
Score = 254 (94.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 76 PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAM 134
PS H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 397 PSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAM 456
Query: 135 SKDRTNMQHRYIELFLN 151
KDR+++QHRYIELFLN
Sbjct: 457 LKDRSHVQHRYIELFLN 473
Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 251 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 310
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 311 EEIGNRYIEIF 321
>UNIPROTKB|F1LMB8 [details] [associations]
symbol:Grsf1 "Protein Grsf1" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1310858
GO:GO:0005739 GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0016331 OMA:LSFFSDC IPI:IPI00949228
PRIDE:F1LMB8 Ensembl:ENSRNOT00000065436 ArrayExpress:F1LMB8
Uniprot:F1LMB8
Length = 479
Score = 254 (94.5 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 76 PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAM 134
PS H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 397 PSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAM 456
Query: 135 SKDRTNMQHRYIELFLN 151
KDR+++QHRYIELFLN
Sbjct: 457 LKDRSHVQHRYIELFLN 473
Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 251 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 310
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 311 EEIGNRYIEIF 321
>UNIPROTKB|F1Q0B7 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 EMBL:AAEX03009136
Ensembl:ENSCAFT00000004672 OMA:GESEMAN Uniprot:F1Q0B7
Length = 281
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 46/76 (60%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYE-NGRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y NG+ +GEADV F THEDA+ AM
Sbjct: 200 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSNGKATGEADVHFDTHEDAVAAML 259
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 260 KDRSHVHHRYIELFLN 275
Score = 137 (53.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 53 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 112
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 113 EEIGNRYIEIF 123
>UNIPROTKB|F5H5I6 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
IPI:IPI00979483 ProteinModelPortal:F5H5I6 SMR:F5H5I6 PRIDE:F5H5I6
Ensembl:ENST00000545193 UCSC:uc011caz.1 ArrayExpress:F5H5I6
Bgee:F5H5I6 Uniprot:F5H5I6
Length = 362
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 281 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAML 340
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 341 KDRSHVHHRYIELFLN 356
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 134 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 193
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 194 EEIGNRYIEIF 204
>UNIPROTKB|A6QPB2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000220896
HOVERGEN:HBG055557 OrthoDB:EOG4XPQGW GeneTree:ENSGT00620000087736
EMBL:DAAA02018025 EMBL:DAAA02018026 EMBL:BC149233 IPI:IPI00705255
UniGene:Bt.53639 SMR:A6QPB2 Ensembl:ENSBTAT00000039551
Uniprot:A6QPB2
Length = 362
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 281 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAML 340
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 341 KDRSHVHHRYIELFLN 356
Score = 138 (53.6 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 134 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHR 193
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 194 EEIGNRYIEIF 204
>UNIPROTKB|H0Y8R1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
PRIDE:H0Y8R1 Ensembl:ENST00000514161 Bgee:H0Y8R1 Uniprot:H0Y8R1
Length = 417
Score = 243 (90.6 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 336 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAML 395
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 396 KDRSHVHHRYIELFLN 411
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 189 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 248
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 249 EEIGNRYIEIF 259
>UNIPROTKB|F1MZF0 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:DAAA02018025 EMBL:DAAA02018026 IPI:IPI00700446
Ensembl:ENSBTAT00000011313 ArrayExpress:F1MZF0 Uniprot:F1MZF0
Length = 399
Score = 242 (90.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 318 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAML 377
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 378 KDRSHVHHRYIELFLN 393
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 171 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMASQALLKHR 230
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 231 EEIGNRYIEIF 241
>UNIPROTKB|H0YAK1 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC021989 HGNC:HGNC:4610 ChiTaRS:GRSF1
OMA:LSFFSDC PRIDE:H0YAK1 Ensembl:ENST00000499044 Bgee:H0YAK1
Uniprot:H0YAK1
Length = 453
Score = 243 (90.6 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 372 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAML 431
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 432 KDRSHVHHRYIELFLN 447
Score = 137 (53.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 225 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 284
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 285 EEIGNRYIEIF 295
>UNIPROTKB|F1RUP2 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 GO:GO:0009952 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016331 GeneTree:ENSGT00620000087736 OMA:LSFFSDC
EMBL:FP325194 RefSeq:XP_003129120.1 UniGene:Ssc.12808
Ensembl:ENSSSCT00000009793 GeneID:100516986 KEGG:ssc:100516986
Uniprot:F1RUP2
Length = 479
Score = 243 (90.6 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 398 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAML 457
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 458 KDRSHVHHRYIELFLN 473
Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 251 VRLRGLPYSCNEKDIVDFFAGLHIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 310
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 311 EEIGNRYIEIF 321
>UNIPROTKB|Q12849 [details] [associations]
symbol:GRSF1 "G-rich sequence factor 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006378
"mRNA polyadenylation" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0000166 GO:GO:0009952
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006378 EMBL:CH471057
GO:GO:0016331 EMBL:U07231 EMBL:AK056891 EMBL:AK090755 EMBL:AK094806
EMBL:AK095799 EMBL:AK097055 EMBL:AK127161 EMBL:AC021989
EMBL:BC040485 IPI:IPI00478657 IPI:IPI00914953 PIR:S48081
RefSeq:NP_001091947.1 RefSeq:NP_002083.3 UniGene:Hs.309763 PDB:2LMI
PDBsum:2LMI ProteinModelPortal:Q12849 SMR:Q12849 IntAct:Q12849
STRING:Q12849 PhosphoSite:Q12849 DMDM:215274142 PaxDb:Q12849
PRIDE:Q12849 Ensembl:ENST00000254799 Ensembl:ENST00000439371
Ensembl:ENST00000502323 GeneID:2926 KEGG:hsa:2926 UCSC:uc003hfs.2
CTD:2926 GeneCards:GC04M071681 HGNC:HGNC:4610 HPA:HPA036985
MIM:604851 neXtProt:NX_Q12849 PharmGKB:PA29003 eggNOG:NOG319259
HOGENOM:HOG000220896 HOVERGEN:HBG055557 InParanoid:Q12849
OrthoDB:EOG4XPQGW ChiTaRS:GRSF1 GenomeRNAi:2926 NextBio:11601
ArrayExpress:Q12849 Bgee:Q12849 CleanEx:HS_GRSF1
Genevestigator:Q12849 GermOnline:ENSG00000132463 Uniprot:Q12849
Length = 480
Score = 243 (90.6 bits), Expect = 5.9e-20, P = 5.9e-20
Identities = 45/76 (59%), Positives = 59/76 (77%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S H VHMRGLPF+AN +D+ +FF P+ PV + + Y + G+ +GEADV F THEDA+ AM
Sbjct: 399 SLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFETHEDAVAAML 458
Query: 136 KDRTNMQHRYIELFLN 151
KDR+++ HRYIELFLN
Sbjct: 459 KDRSHVHHRYIELFLN 474
Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V +RGLP+ NE+D+ DFF +V + + Y R +GEA V F E A QA+ K R
Sbjct: 252 VRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHR 311
Query: 139 TNMQHRYIELF 149
+ +RYIE+F
Sbjct: 312 EEIGNRYIEIF 322
>UNIPROTKB|E1BMP6 [details] [associations]
symbol:E1BMP6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
EMBL:DAAA02072842 IPI:IPI00699769 ProteinModelPortal:E1BMP6
Ensembl:ENSBTAT00000027332 Uniprot:E1BMP6
Length = 415
Score = 230 (86.0 bits), Expect = 9.7e-19, P = 9.7e-19
Identities = 47/75 (62%), Positives = 58/75 (77%)
Query: 79 HTVHMRGLPFRANERDVADF--FRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H VHMRGLP++A E D+ +F PV VH++I +GR + EADV+FATHE+AM AMSK
Sbjct: 291 HCVHMRGLPYKATENDIYNFSLLNPV-RVHIEIG-PDGRVTSEADVEFATHEEAMVAMSK 348
Query: 137 DRTNMQHRYIELFLN 151
+R NMQHRYIELFLN
Sbjct: 349 NRANMQHRYIELFLN 363
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 71 NESSGPSRHTVHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGEADVDFATH 127
N S V +RGLPF E D+ FF ++P + + + G+ +GEA V FA+
Sbjct: 105 NSGDSSSDGFVRLRGLPFGCTE-DIIQFFSGLEIMPNRITLPVDPEGKTTGEAFVQFASQ 163
Query: 128 EDAMQAMSKDRTNM-QHRYIELF 149
E A +A+ K++ + HRYIE+F
Sbjct: 164 ELAEKALGKNKKRIIGHRYIEVF 186
>UNIPROTKB|F1LV61 [details] [associations]
symbol:F1LV61 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 InterPro:IPR012996 Pfam:PF08080
IPI:IPI00952226 ProteinModelPortal:F1LV61
Ensembl:ENSRNOT00000020819 Uniprot:F1LV61
Length = 408
Score = 224 (83.9 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 44/74 (59%), Positives = 55/74 (74%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
H VH RGLP++A E D+ +FF P+ PV V +GR +GEAD +FATHE+A+ AMSKD
Sbjct: 289 HCVHTRGLPYKATENDIYNFFSPLNPVRVHTEIGPDGRVTGEADAEFATHEEAVAAMSKD 348
Query: 138 RTNMQHRYIELFLN 151
R MQHRYI+LFLN
Sbjct: 349 RA-MQHRYIQLFLN 361
Score = 113 (44.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 75 GPSRHTVHMRGLPFRANERDVADFFRP------VVPVHVDIHYENGRPSGEADVDFATHE 128
G + V + GLP+ + +V +F VV VH I+ GR SGEA V + E
Sbjct: 8 GGEGYVVKLLGLPWSCSIPEVQNFLSDCTIHDGVVGVHF-IYTREGRQSGEAFVKPESEE 66
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
D A+ +DR +M HRYIE+F
Sbjct: 67 DVKLALKEDRESMGHRYIEVF 87
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIH-YENGRPSGE 119
WV + SGP S ++ V ++GLP + + FF +VP + Y G+ +GE
Sbjct: 96 WVLKRSGPNSAYSANDGFVSLQGLPCGCTKEEAIQFFSGLEIVPNGNTLPVYLEGKITGE 155
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A K + + HRYIE+F
Sbjct: 156 AFVQFASQELAEKAFGKHKERIGHRYIEVF 185
>ZFIN|ZDB-GENE-060825-196 [details] [associations]
symbol:grsf1 "G-rich RNA sequence binding factor 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-060825-196 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BX323596 GeneTree:ENSGT00620000087736
IPI:IPI01023901 ProteinModelPortal:F8W4V6
Ensembl:ENSDART00000149868 ArrayExpress:F8W4V6 Bgee:F8W4V6
Uniprot:F8W4V6
Length = 403
Score = 196 (74.1 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 38/76 (50%), Positives = 52/76 (68%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMS 135
+++ +HMRGLPF A D+ FF PV + V + + G+P+GEA+ F THEDA+ AMS
Sbjct: 320 TKNVIHMRGLPFDAKAEDIVKFFAPVRLMKVVVEFGPEGKPTGEAEAYFKTHEDAVLAMS 379
Query: 136 KDRTNMQHRYIELFLN 151
KDR + RYIEL+LN
Sbjct: 380 KDREFIMERYIELYLN 395
Score = 121 (47.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 81 VHMRGLPFRANERDVADFFR--PVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMSKD 137
V +RGLP+ E D+ FF VV V I G+ SG+A V+FAT A +A+ KD
Sbjct: 214 VRLRGLPYSCTEGDIIRFFSGLDVVEDGVTIILNRRGKSSGDAFVEFATKAMAEKALKKD 273
Query: 138 RTNMQHRYIELF 149
R + +RYIE+F
Sbjct: 274 REILGNRYIEIF 285
>UNIPROTKB|F2Z5W4 [details] [associations]
symbol:LOC100737162 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00620000087736 EMBL:CU468421
Ensembl:ENSSSCT00000011205 Uniprot:F2Z5W4
Length = 133
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 38/56 (67%), Positives = 45/56 (80%)
Query: 98 FFRPVVP--VHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTNMQHRYIELFLN 151
FF P+ P VH+DI + GR +GEADV+F THEDA+ AMSKD+ NMQHRYIELFLN
Sbjct: 1 FFSPLNPIRVHIDIGAD-GRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLN 55
>FB|FBgn0259139 [details] [associations]
symbol:glo "glorund" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0006417
"regulation of translation" evidence=IMP;NAS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0043234
"protein complex" evidence=IPI] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0007311 "maternal specification of dorsal/ventral
axis, oocyte, germ-line encoded" evidence=IMP] [GO:0045451 "pole
plasm oskar mRNA localization" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051276 "chromosome organization"
evidence=IMP] [GO:0042060 "wound healing" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
EMBL:AE014297 GO:GO:0043234 GO:GO:0006417 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0042060 GO:GO:0046427
GO:GO:0051276 GO:GO:0045451 GO:GO:0007311
GeneTree:ENSGT00620000087828 KO:K12898 FlyBase:FBgn0259139
UniGene:Dm.4997 GeneID:41431 KEGG:dme:Dmel_CG6946 CTD:41431
GenomeRNAi:41431 NextBio:823816 EMBL:AY089465 RefSeq:NP_650120.1
RefSeq:NP_731639.1 SMR:Q9VGH5 IntAct:Q9VGH5 MINT:MINT-293245
STRING:Q9VGH5 EnsemblMetazoa:FBtr0089917 EnsemblMetazoa:FBtr0089919
UCSC:CG6946-RA InParanoid:Q9VGH5 OMA:NFGPIGG Uniprot:Q9VGH5
Length = 586
Score = 176 (67.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
+T+HMRGLP+ + E DV FF P+ P +V I+Y + G SG AD F T+ED+ AM +
Sbjct: 481 YTIHMRGLPYTSFENDVFKFFEPIRPANVRINYNKKGLHSGTADAYFDTYEDSQVAMKRH 540
Query: 138 RTNMQHRYIELF 149
R M RYIELF
Sbjct: 541 REQMGSRYIELF 552
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 72 ESSGPSRHTVHMRGLPFRANERDVADFFRPV------VPVHVDIHYENGRPSGEADVDFA 125
E+ G S V +RGLP+ A +++ DF V +H+ +G+ +GEA V+ A
Sbjct: 42 ENVGESPKFVRLRGLPWSATHKEILDFLENVNVTNGSAGIHLVTSRVDGKNTGEAYVEVA 101
Query: 126 THEDAMQAMSKDRTNMQHRYIELF 149
+ ED +A ++ +M HRYIE+F
Sbjct: 102 SQEDVEEARKLNKASMGHRYIEVF 125
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVD------IHYENGRPSGEADVDFATHEDAMQAM 134
V +RGLP+ E+ + +FF + + D + GR +GEA V F + +D QA+
Sbjct: 148 VKLRGLPYAVTEQQIEEFFSGL-DIKTDREGILFVMDRRGRATGEAFVQFESQDDTEQAL 206
Query: 135 SKDRTNMQHRYIELF 149
++R + HRYIE+F
Sbjct: 207 GRNREKIGHRYIEIF 221
Score = 40 (19.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 6 GGFG-RPAPYD 15
GG G RP PYD
Sbjct: 236 GGVGGRPGPYD 246
>UNIPROTKB|G3N1Y9 [details] [associations]
symbol:G3N1Y9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
EMBL:DAAA02057210 Ensembl:ENSBTAT00000065958 Uniprot:G3N1Y9
Length = 426
Score = 181 (68.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 40/81 (49%), Positives = 48/81 (59%)
Query: 69 WVNESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHE 128
W + H+ HM G P RA E+ F P+ PV V NGR +GEADV+FATHE
Sbjct: 271 WGTVEQDTTGHSAHMWGPPHRAPEKS----FSPLNPVRVHTETGNGRVTGEADVEFATHE 326
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
DA+ A SKD+ NM H Y ELF
Sbjct: 327 DAVAATSKDKANMHHMY-ELF 346
Score = 104 (41.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/90 (34%), Positives = 47/90 (52%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYENGRPS-GE 119
WV E +GP S T V + GLPF ++ ++ FF +VP + + + R S GE
Sbjct: 93 WVLEHTGPHSPDTASDGFVRLSGLPFGCSKEEMVQFFAGLEIVPNGITLQVDMQRRSTGE 152
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A A+ K + + RY+ +F
Sbjct: 153 AFVWFASQEIAEMALKKHKERIGRRYMGIF 182
>UNIPROTKB|F1NWS6 [details] [associations]
symbol:GRSF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0016331 "morphogenesis of
embryonic epithelium" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087736 EMBL:AADN02009154 IPI:IPI00602123
Ensembl:ENSGALT00000018869 OMA:ISTKREM Uniprot:F1NWS6
Length = 411
Score = 167 (63.8 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 77 SRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQAMS 135
S TVH+RG P + + +D+ DFF P+ P + I Y + G +GEADV F +++DA+ AM+
Sbjct: 327 SLRTVHVRGFPPQVSAQDIVDFFAPLKPTRILIEYNSDGVATGEADVHFESYDDAVAAMA 386
Query: 136 KDRTNMQHRYIELFL 150
K+R +Q +E+FL
Sbjct: 387 KERAQLQFGTVEVFL 401
Score = 132 (51.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 72 ESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAM 131
ES S V +RGLPF + E D+ADFF + + Y R +GEA V FA E
Sbjct: 167 ESEVMSDGVVLLRGLPFDSTEDDIADFFAGLRITDMTFVYRGERKTGEAYVQFAAPEMVA 226
Query: 132 QAMSKDRTNMQHRYIELFLN 151
+A+ + + M++RYIE++++
Sbjct: 227 KALLRHKEYMENRYIEVYIS 246
>UNIPROTKB|I3L8F5 [details] [associations]
symbol:I3L8F5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
GeneTree:ENSGT00620000087736 EMBL:CU861910
Ensembl:ENSSSCT00000030195 OMA:PENGSAM Uniprot:I3L8F5
Length = 194
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPV--HVDIHYENGRPSGEADVDFATHEDAMQAMSK 136
H + M GL F + E+D+A+FF + PV H DI + G+ + EADV+F T +D + +MSK
Sbjct: 51 HIMLMGGLHFHSTEKDIANFFSTLNPVLVHTDISAD-GKET-EADVEFMTCKDPVFSMSK 108
Query: 137 DRTNMQHRYIELFLN 151
D+ N H+Y EL LN
Sbjct: 109 DKNNTLHQYFELLLN 123
>UNIPROTKB|I3LFQ0 [details] [associations]
symbol:HNRNPH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087736 EMBL:FP476068
Ensembl:ENSSSCT00000027886 OMA:NDIANXH Uniprot:I3LFQ0
Length = 216
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 35/88 (39%), Positives = 54/88 (61%)
Query: 69 WVNESSGP---SRHTVHMRGLPFRANERDVADFFR--PVVP--VHVDIHYENGRPSGEAD 121
WV + +GP S TV +RGLPF ++ ++ FF+ +VP + + + Y+ GR +GEA
Sbjct: 3 WVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQ-GRSTGEAF 61
Query: 122 VDFATHEDAMQAMSKDRTNMQHRYIELF 149
V FA+ E A A+ K + + HRYIE+F
Sbjct: 62 VQFASKEIAENALGKHKERIGHRYIEIF 89
>WB|WBGene00022253 [details] [associations]
symbol:hrpf-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0040018 GO:GO:0003676 EMBL:FO081731 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K12898 RefSeq:NP_741422.1
ProteinModelPortal:Q8MXR2 SMR:Q8MXR2 DIP:DIP-24945N IntAct:Q8MXR2
MINT:MINT-1106723 STRING:Q8MXR2 PaxDb:Q8MXR2
EnsemblMetazoa:Y73B6BL.33 GeneID:177398 KEGG:cel:CELE_Y73B6BL.33
UCSC:Y73B6BL.33 CTD:177398 WormBase:Y73B6BL.33 HOGENOM:HOG000017787
InParanoid:Q8MXR2 OMA:QRMGRRY NextBio:896644 Uniprot:Q8MXR2
Length = 610
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 73 SSG--PSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDA 130
SSG P + +RGLPF A E+D+ +FF + V GRP+GEA V+F E+A
Sbjct: 56 SSGEPPRSQYIRLRGLPFNATEKDIHEFFAGLTIERVKFVCTTGRPNGEAYVEFKNTEEA 115
Query: 131 MQAMSKDRTNMQHRYIELF 149
+AM DR + +RYIE+F
Sbjct: 116 GKAMENDRKEISNRYIEVF 134
Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 81 VHMRGLPFRANERDVADFFRPVV--PVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V+MRGLP+ A++ +A FF P+ V + I+ E GRPSG+A +F + D A+S++
Sbjct: 327 VYMRGLPYDADDHAIAAFFSPLRCHSVKIGIN-ETGRPSGDAIAEFDNYNDLQVALSRNN 385
Query: 139 TNMQHRYIELFLN 151
M RY+ELF N
Sbjct: 386 QRMGRRYVELFDN 398
Score = 133 (51.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 72 ESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHY-----ENGRPSGEADVDFAT 126
+S+G H + +RG+P+ E DV FF + P +I RPSGEA V F T
Sbjct: 150 DSNGEVNHVIRLRGVPWSCKEDDVRKFFEGLEPPPAEIVIGGTGGPRSRPSGEAFVRFTT 209
Query: 127 HEDAMQAMSKDRTNMQHRYIELFLN 151
+ A +AM + +M RY+E+F++
Sbjct: 210 QDAAEKAMDYNNRHMGSRYVEVFMS 234
>UNIPROTKB|H0YBK1 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] InterPro:IPR012677 GO:GO:0005634 GO:GO:0000166
GO:GO:0015629 Gene3D:3.30.70.330 EMBL:AC136604 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 Ensembl:ENST00000523449 Uniprot:H0YBK1
Length = 117
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELFLN 151
ADV+FATHEDA+ AMSKD+ NMQHRY+ELFLN
Sbjct: 2 ADVEFATHEDAVAAMSKDKANMQHRYVELFLN 33
>WB|WBGene00020936 [details] [associations]
symbol:hrpf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:FO081084 GeneID:172395 KEGG:cel:CELE_W02D3.11 CTD:172395
RefSeq:NP_740877.1 ProteinModelPortal:Q9BIB7 SMR:Q9BIB7
DIP:DIP-24897N IntAct:Q9BIB7 MINT:MINT-1090704 STRING:Q9BIB7
PRIDE:Q9BIB7 EnsemblMetazoa:W02D3.11a.1 EnsemblMetazoa:W02D3.11a.2
UCSC:W02D3.11b WormBase:W02D3.11a HOGENOM:HOG000017293
InParanoid:Q9BIB7 OMA:EPYAQRE NextBio:875329 ArrayExpress:Q9BIB7
Uniprot:Q9BIB7
Length = 549
Score = 153 (58.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 77 SRHTV-HMRGLPFRANERDVADFFRPVVPVHVDI--HYENGRPSGEADVDFATHEDAMQA 133
++H V MRG+PFRA+E DV DFF P+ P V++ ++ RPSG+A V F +D A
Sbjct: 468 NQHFVLRMRGVPFRASEADVYDFFHPIRPNQVELLRDHQFQRPSGDARVIFYNRKDYDDA 527
Query: 134 MSKDRTNMQHRYIEL 148
+ KD+ M RYIE+
Sbjct: 528 LMKDKQYMGERYIEM 542
Score = 141 (54.7 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 34/80 (42%), Positives = 42/80 (52%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDI---HYENGRPSGEADVDFATHED 129
SSGP V +RGLPF RD++DF P+ V I + RP GEA V F T E
Sbjct: 118 SSGPDS-IVRLRGLPFSVTSRDISDFLAPLPIVRDGILLPDQQRARPGGEAYVCFETMES 176
Query: 130 AMQAMSKDRTNMQHRYIELF 149
A + N+ HRYIE+F
Sbjct: 177 VQIAKQRHMKNIGHRYIEVF 196
Score = 138 (53.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
+ V RGLP+ A E+++ DFF ++I NGR SG+A V F ED A+ KDR
Sbjct: 5 YEVQCRGLPWEATEQELRDFFGNNGIESLEIPRRNGRTSGDAKVVFTNEEDYNNALKKDR 64
Query: 139 TNMQHRYIELF 149
++ RYIE+F
Sbjct: 65 EHLGSRYIEVF 75
>UNIPROTKB|D6RBM0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HOGENOM:HOG000220896 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 IPI:IPI00964535 ProteinModelPortal:D6RBM0
SMR:D6RBM0 Ensembl:ENST00000505811 ArrayExpress:D6RBM0 Bgee:D6RBM0
Uniprot:D6RBM0
Length = 212
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 95 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 154
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 155 AFVQFASQEIAEKALKKHKERIGHRYIEIF 184
Score = 115 (45.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|E5RGV0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00974526
ProteinModelPortal:E5RGV0 SMR:E5RGV0 Ensembl:ENST00000519056
ArrayExpress:E5RGV0 Bgee:E5RGV0 Uniprot:E5RGV0
Length = 155
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 43 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 102
Query: 120 ADVDFATHEDAMQAMSKDRTNMQHRYIELF 149
A V FA+ E A +A+ K + + HRYIE+F
Sbjct: 103 AFVQFASQEIAEKALKKHKERIGHRYIEIF 132
>ZFIN|ZDB-GENE-070112-1732 [details] [associations]
symbol:esrp1 "epithelial splicing regulatory
protein 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-070112-1732 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 EMBL:BC129044 EMBL:BC134218 IPI:IPI00829273
RefSeq:NP_001074045.1 UniGene:Dr.13001 ProteinModelPortal:A1L1G1
SMR:A1L1G1 STRING:A1L1G1 Ensembl:ENSDART00000103431 GeneID:560190
KEGG:dre:560190 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 InParanoid:A4FVM7
KO:K14947 OMA:HIRQVIH OrthoDB:EOG42RD72 NextBio:20883322
Bgee:A1L1G1 Uniprot:A1L1G1
Length = 714
Score = 135 (52.6 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A V FF P PV + + + +GRP+G+A V F+ E A A+
Sbjct: 328 VRMRGLPFNATAEQVLQFFSPACPVTDGSEGILFVRFPDGRPTGDAFVLFSCEEHAQNAL 387
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 388 KKHKDMLGKRYIELF 402
Score = 33 (16.7 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ R+ +A++ + ++K+R + V C
Sbjct: 499 QMRSAERAFLAAQRCHKRSMKERYVEVFAC 528
>UNIPROTKB|I3L5T6 [details] [associations]
symbol:I3L5T6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087736
InterPro:IPR012996 Pfam:PF08080 EMBL:CU633293
Ensembl:ENSSSCT00000028833 Uniprot:I3L5T6
Length = 413
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/73 (45%), Positives = 41/73 (56%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
H +H+RGL E D+ FF + PV V H G P G +FA HE+ M A+SK R
Sbjct: 288 HCIHLRGL---YTENDIYSFFSSLNPVRV--HTGIG-PDGRVISEFAIHEEDMAAISKHR 341
Query: 139 TNMQHRYIELFLN 151
N Q Y+ELFLN
Sbjct: 342 ANKQQSYMELFLN 354
>UNIPROTKB|Q9Y4C8 [details] [associations]
symbol:RBM19 "Probable RNA-binding protein 19" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS;IDA] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0040019 eggNOG:COG0724 KO:K14787
HOGENOM:HOG000211156 OMA:VFREKNV EMBL:AB014582 EMBL:AL117547
EMBL:AC009731 EMBL:AC073863 EMBL:AC090669 EMBL:BC004289
EMBL:BC006137 IPI:IPI00000686 PIR:T17297 RefSeq:NP_001140170.1
RefSeq:NP_001140171.1 RefSeq:NP_057280.2 UniGene:Hs.7482 PDB:2DGW
PDBsum:2DGW ProteinModelPortal:Q9Y4C8 SMR:Q9Y4C8 MINT:MINT-1196129
STRING:Q9Y4C8 PhosphoSite:Q9Y4C8 DMDM:308153566 SWISS-2DPAGE:Q9Y4C8
PaxDb:Q9Y4C8 PRIDE:Q9Y4C8 DNASU:9904 Ensembl:ENST00000261741
Ensembl:ENST00000392561 Ensembl:ENST00000545145 GeneID:9904
KEGG:hsa:9904 UCSC:uc001tvm.3 CTD:9904 GeneCards:GC12M114259
HGNC:HGNC:29098 HPA:HPA038860 neXtProt:NX_Q9Y4C8
PharmGKB:PA134886784 HOVERGEN:HBG055637 InParanoid:Q9Y4C8
OrthoDB:EOG4D7Z56 PhylomeDB:Q9Y4C8 ChiTaRS:RBM19
EvolutionaryTrace:Q9Y4C8 GenomeRNAi:9904 NextBio:37345 Bgee:Q9Y4C8
CleanEx:HS_RBM19 Genevestigator:Q9Y4C8 GermOnline:ENSG00000122965
Uniprot:Q9Y4C8
Length = 960
Score = 140 (54.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 71 NESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADVDFATHED 129
N+ + HTV +RG PF E++V +F P+ PV + I +G +G VDF+ E+
Sbjct: 286 NQKEPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEE 345
Query: 130 AMQAMSKDRTNMQHRYIELF 149
QA+ +R M RYIE+F
Sbjct: 346 VKQALKCNREYMGGRYIEVF 365
>UNIPROTKB|F1RKD1 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:CT971483
Ensembl:ENSSSCT00000010816 Uniprot:F1RKD1
Length = 965
Score = 140 (54.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 69 WVNESSGPSR-----HTVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADV 122
WV E R HTV +RG PF E++V +F P+ PV + I +G +G V
Sbjct: 280 WVTEKPAHQREPTTPHTVKLRGAPFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYVFV 339
Query: 123 DFATHEDAMQAMSKDRTNMQHRYIELF 149
DF++ E+ +A+ +R M RYIE+F
Sbjct: 340 DFSSEEEVKKALQCNREYMGGRYIEVF 366
>TAIR|locus:2156897 [details] [associations]
symbol:AT5G66010 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K12898
IPI:IPI00541506 RefSeq:NP_201402.3 UniGene:At.28214
ProteinModelPortal:F4JZ11 SMR:F4JZ11 EnsemblPlants:AT5G66010.1
GeneID:836731 KEGG:ath:AT5G66010 OMA:YEVGSKR Uniprot:F4JZ11
Length = 255
Score = 130 (50.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 83 MRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGEADVDFATHEDAMQAMSKDRT 139
MRGLP+ N+ + +FF V+ V + +G+ +GEA V+F T E+A +AM+KD+
Sbjct: 170 MRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKM 229
Query: 140 NMQHRYIELF 149
++ RY+ELF
Sbjct: 230 SIGSRYVELF 239
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
V +RGLPF + D+ +FF + V V + +NG+ SGEA V FA A+ +DR N
Sbjct: 51 VRLRGLPFNCADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHN 110
Query: 141 MQHRYIELF 149
M RY+E+F
Sbjct: 111 MGRRYVEVF 119
>UNIPROTKB|F1PQY5 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03015961 Ensembl:ENSCAFT00000014811 Uniprot:F1PQY5
Length = 521
Score = 121 (47.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 168 VRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 227
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 228 RKHKDLLGKRYIELF 242
Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 284 RDCIRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSADRAF 342
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 343 MAAQKCHKKTMKDRYVEVF 361
Score = 34 (17.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 334 QMKSADRAFMAAQKCHKKTMKDRYVEVFQC 363
>RGD|1560481 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484
"regulation of RNA splicing" evidence=IEA;ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
EMBL:AABR03040708 EMBL:AABR03042124 EMBL:BC166735 IPI:IPI00929919
IPI:IPI00948834 RefSeq:NP_001121036.2 UniGene:Rn.161971
Ensembl:ENSRNOT00000067129 GeneID:500409 KEGG:rno:500409
UCSC:RGD:1560481 NextBio:706112 ArrayExpress:B2RYD2
Genevestigator:B2RYD2 Uniprot:B2RYD2
Length = 677
Score = 123 (48.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 328 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 387
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 388 RKHKDLLGKRYIELF 402
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R V +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 444 RDCVRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSTDRAF 502
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 503 MAAQKYHKKTMKDRYVEVF 521
Score = 34 (17.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 494 QMKSTDRAFMAAQKYHKKTMKDRYVEVFQC 523
>MGI|MGI:1917326 [details] [associations]
symbol:Esrp1 "epithelial splicing regulatory protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917326 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 EMBL:CH466538 SUPFAM:SSF53098 GO:GO:0043484
EMBL:AL772170 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 EMBL:AK042164 EMBL:AK140848
EMBL:AK166376 EMBL:BC031468 EMBL:BC059280 IPI:IPI00377935
IPI:IPI00649037 IPI:IPI00828247 IPI:IPI00828788 IPI:IPI01027663
RefSeq:NP_918944.2 UniGene:Mm.387719 HSSP:Q9Z2X1
ProteinModelPortal:Q3US41 SMR:Q3US41 STRING:Q3US41 PaxDb:Q3US41
PRIDE:Q3US41 Ensembl:ENSMUST00000043781 Ensembl:ENSMUST00000108310
Ensembl:ENSMUST00000108313 Ensembl:ENSMUST00000147342
Ensembl:ENSMUST00000155519 GeneID:207920 KEGG:mmu:207920
UCSC:uc008rzk.2 UCSC:uc008rzl.2 UCSC:uc008rzm.2 UCSC:uc008rzn.1
InParanoid:Q3US41 NextBio:372085 Bgee:Q3US41 CleanEx:MM_RBM35A
Genevestigator:Q3US41 Uniprot:Q3US41
Length = 680
Score = 123 (48.4 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 327 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 386
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 387 RKHKELLGKRYIELF 401
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 443 RDCIRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSTDRAF 501
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 502 MAAQKYHKKTMKDRYVEVF 520
Score = 34 (17.0 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 493 QMKSTDRAFMAAQKYHKKTMKDRYVEVFQC 522
>UNIPROTKB|F1LP81 [details] [associations]
symbol:Esrp1 "Epithelial-splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1560481
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 IPI:IPI00558323
Ensembl:ENSRNOT00000010846 ArrayExpress:F1LP81 Uniprot:F1LP81
Length = 681
Score = 123 (48.4 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 328 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 387
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 388 RKHKDLLGKRYIELF 402
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R V +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 444 RDCVRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSTDRAF 502
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 503 MAAQKYHKKTMKDRYVEVF 521
Score = 34 (17.0 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 494 QMKSTDRAFMAAQKYHKKTMKDRYVEVFQC 523
>UNIPROTKB|Q6DEZ7 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043484 "regulation of RNA splicing" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
SUPFAM:SSF53098 GO:GO:0043484 CTD:54845 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:P55795 EMBL:BC076946 RefSeq:NP_001005057.1
UniGene:Str.5962 ProteinModelPortal:Q6DEZ7 SMR:Q6DEZ7 PRIDE:Q6DEZ7
Ensembl:ENSXETT00000032125 GeneID:448608 KEGG:xtr:448608
Xenbase:XB-GENE-985138 InParanoid:Q6DEZ7 Bgee:Q6DEZ7 Uniprot:Q6DEZ7
Length = 687
Score = 119 (46.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF PV + + Y + RP+G+A V FA E A A+
Sbjct: 329 VRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNAL 388
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 389 KKHKELLGKRYIELF 403
Score = 38 (18.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++AY+ + +KDR + V C
Sbjct: 495 QMKSADRAYLAAQKCHKKTMKDRYVEVFQC 524
>UNIPROTKB|Q7ZY29 [details] [associations]
symbol:esrp1 "Epithelial splicing regulatory protein 1"
species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0043484
"regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
CTD:54845 KO:K14947 EMBL:BC044002 RefSeq:NP_001079524.1
UniGene:Xl.14515 HSSP:P55795 ProteinModelPortal:Q7ZY29 SMR:Q7ZY29
PRIDE:Q7ZY29 GeneID:379211 KEGG:xla:379211 Xenbase:XB-GENE-985143
Uniprot:Q7ZY29
Length = 688
Score = 119 (46.9 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 31/75 (41%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF PV + + Y + RP+G+A V FA E A A+
Sbjct: 329 VRMRGLPFTATAEEVLAFFGQQCPVTGGKEGILFVTYPDNRPTGDAFVLFACEEYAQNAL 388
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 389 KKHKELLGKRYIELF 403
Score = 38 (18.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++AY+ + +KDR + V C
Sbjct: 495 QMKSADRAYLAAQKCHKKTMKDRYVEVFQC 524
>UNIPROTKB|F1PSN8 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:AAEX03015961
Ensembl:ENSCAFT00000014804 Uniprot:F1PSN8
Length = 634
Score = 121 (47.7 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 285 VRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 344
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 345 RKHKDLLGKRYIELF 359
Score = 104 (41.7 bits), Expect = 0.00042, P = 0.00042
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 401 RDCIRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSADRAF 459
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 460 MAAQKCHKKTMKDRYVEVF 478
Score = 34 (17.0 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 451 QMKSADRAFMAAQKCHKKTMKDRYVEVFQC 480
>ZFIN|ZDB-GENE-030131-9824 [details] [associations]
symbol:esrp2 "epithelial splicing regulatory
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0043484 "regulation of RNA
splicing" evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-9824 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098
GO:GO:0043484 eggNOG:NOG262593 HOGENOM:HOG000112401 KO:K14947
OrthoDB:EOG42RD72 HSSP:Q9Z2X1 CTD:80004 EMBL:BC045439 EMBL:BC065688
IPI:IPI00488983 IPI:IPI00769676 RefSeq:NP_954966.1 UniGene:Dr.200
ProteinModelPortal:Q7ZVR8 SMR:Q7ZVR8 STRING:Q7ZVR8 PRIDE:Q7ZVR8
GeneID:572992 KEGG:dre:572992 InParanoid:Q7ZVR8 NextBio:20891026
Uniprot:Q7ZVR8
Length = 736
Score = 133 (51.9 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
+ MRGLPF A +DV F P PV + + Y +GRP+G+A V FA E A A+
Sbjct: 327 IRMRGLPFTATPQDVLGFLGPECPVTDGTEGLLFVKYPDGRPTGDAFVLFACEEYAQNAL 386
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 387 KKHKQILGKRYIELF 401
>WB|WBGene00006367 [details] [associations]
symbol:sym-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0010172 "embryonic body morphogenesis"
evidence=IGI] [GO:0050879 "multicellular organismal movement"
evidence=IGI] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0009792 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043484
GO:GO:0010172 eggNOG:NOG262593 GeneTree:ENSGT00620000087828
KO:K14947 HSSP:P55795 EMBL:Z68319 EMBL:Z70038 EMBL:AY220985
PIR:T25208 RefSeq:NP_495960.2 UniGene:Cel.5905
ProteinModelPortal:Q22708 SMR:Q22708 IntAct:Q22708 STRING:Q22708
PaxDb:Q22708 EnsemblMetazoa:ZK1067.6 GeneID:174461
KEGG:cel:CELE_ZK1067.6 UCSC:ZK1067.6 CTD:174461 WormBase:ZK1067.6
HOGENOM:HOG000154473 InParanoid:Q22708 OMA:VENVMFT NextBio:884134
GO:GO:0050879 Uniprot:Q22708
Length = 618
Score = 132 (51.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V MRGLP+ + + FF P+ + I +GRP+G+A V F T EDA Q + K R
Sbjct: 283 VRMRGLPYDCTDAQIRTFFEPLKLTDKILFITRTDGRPTGDAFVQFETEEDAQQGLLKHR 342
Query: 139 TNMQHRYIELF 149
+ RYIELF
Sbjct: 343 QVIGQRYIELF 353
>UNIPROTKB|F1MVN3 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 CTD:54845
GeneTree:ENSGT00620000087828 KO:K14947 OMA:VAAMTEC
EMBL:DAAA02039465 IPI:IPI00913393 RefSeq:NP_001179931.1
UniGene:Bt.62027 Ensembl:ENSBTAT00000037192 GeneID:538640
KEGG:bta:538640 NextBio:20877490 Uniprot:F1MVN3
Length = 677
Score = 121 (47.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 328 VRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 387
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 388 RKHKDLLGKRYIELF 402
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 444 RDCIRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSADRAF 502
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 503 MAAQKCHKKTMKDRYVEVF 521
Score = 34 (17.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 494 QMKSADRAFMAAQKCHKKTMKDRYVEVFQC 523
>UNIPROTKB|Q5ZLR4 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9031 "Gallus gallus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484
eggNOG:NOG262593 GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401
KO:K14947 HSSP:Q9Z2X1 EMBL:AJ719670 IPI:IPI00574410
RefSeq:NP_001025737.1 UniGene:Gga.9032 ProteinModelPortal:Q5ZLR4
SMR:Q5ZLR4 PRIDE:Q5ZLR4 Ensembl:ENSGALT00000005333 GeneID:415710
KEGG:gga:415710 CTD:80004 InParanoid:Q5ZLR4 OMA:VIKQKYE
OrthoDB:EOG49078K NextBio:20819270 Uniprot:Q5ZLR4
Length = 701
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
+ MRGLPF A + DV F P PV + + Y +GRP+G+A V F+ E A A+
Sbjct: 329 IRMRGLPFTATQEDVLGFLGPECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNAL 388
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 389 KKHKEILGKRYIELF 403
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFF----RPVVP--VHVDIHYENGRPSGEADVDFAT 126
++G R V +RGLP+ A D+ DF + P VH+ ++ + GRPSG+A + +
Sbjct: 441 ATGSIRDCVRLRGLPYTAGIDDILDFMGDATADIKPHGVHMVLN-QQGRPSGDAFIQMKS 499
Query: 127 HEDAMQAMSK-DRTNMQHRYIELF 149
+ A K + M+ RY+E+F
Sbjct: 500 ADKAFMVAQKCHKKMMKDRYVEVF 523
>UNIPROTKB|F1RY52 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005886 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VAAMTEC EMBL:CU468309
Ensembl:ENSSSCT00000006690 Uniprot:F1RY52
Length = 711
Score = 121 (47.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 358 VRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 417
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 418 RKHKDLLGKRYIELF 432
Score = 104 (41.7 bits), Expect = 0.00048, P = 0.00048
Identities = 26/79 (32%), Positives = 40/79 (50%)
Query: 78 RHTVHMRGLPFRANERDVADF---FRPVVPVHVDIHY---ENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF F + H +H GRPSG+A + + + A
Sbjct: 474 RDCIRLRGLPYAATIEDILDFLGEFSTDIRTH-GVHMVLNHQGRPSGDAFIQMKSADRAF 532
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + M+ RY+E+F
Sbjct: 533 MAAQKCHKKTMKDRYVEVF 551
Score = 34 (17.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 524 QMKSADRAFMAAQKCHKKTMKDRYVEVFQC 553
>UNIPROTKB|E2RRF5 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:AAEX03014696
Ensembl:ENSCAFT00000014561 Uniprot:E2RRF5
Length = 968
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 71 NESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADVDFATHED 129
N+ + +TV +RG PF E++V +F P+ PV + I +G +G VDF + E+
Sbjct: 289 NQKEPTTPYTVKLRGAPFNVTEKNVLEFLAPLRPVAIRIVRNAHGNKTGYIFVDFRSEEE 348
Query: 130 AMQAMSKDRTNMQHRYIELF 149
QA+ +R M RYIE+F
Sbjct: 349 IKQALKCNREYMGGRYIEIF 368
>UNIPROTKB|F1P509 [details] [associations]
symbol:ESRP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0043484 "regulation
of RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0043484 GeneTree:ENSGT00620000087828 OMA:VAAMTEC
EMBL:AADN02024878 IPI:IPI00596521 Ensembl:ENSGALT00000025730
Uniprot:F1P509
Length = 523
Score = 115 (45.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF +V FF PV + + Y + RP+G+A V FA E A A+
Sbjct: 244 VRMRGLPFNVTTEEVLAFFGQHCPVTGGKEGVLFVTYPDSRPTGDAFVLFACEEYAQNAL 303
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 304 KKHKDLLGKRYIELF 318
Score = 34 (17.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 189 ERRNPNQAYVENTALSRSAVKDRAINVQLC 218
+ ++ ++A++ + +KDR + V C
Sbjct: 410 QMKSADRAFLAAQRCHKKTMKDRYVEVFQC 439
>UNIPROTKB|D6R9T0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964846
ProteinModelPortal:D6R9T0 SMR:D6R9T0 Ensembl:ENST00000510431
HOGENOM:HOG000134241 ArrayExpress:D6R9T0 Bgee:D6R9T0 Uniprot:D6R9T0
Length = 162
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RAM1 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967835
ProteinModelPortal:D6RAM1 SMR:D6RAM1 Ensembl:ENST00000515158
ArrayExpress:D6RAM1 Bgee:D6RAM1 Uniprot:D6RAM1
Length = 130
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RDU3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00968132
ProteinModelPortal:D6RDU3 SMR:D6RDU3 Ensembl:ENST00000506721
ArrayExpress:D6RDU3 Bgee:D6RDU3 Uniprot:D6RDU3
Length = 171
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RFM3 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041 ChiTaRS:HNRNPH1
HOGENOM:HOG000134241 IPI:IPI00965435 ProteinModelPortal:D6RFM3
SMR:D6RFM3 Ensembl:ENST00000513225 ArrayExpress:D6RFM3 Bgee:D6RFM3
Uniprot:D6RFM3
Length = 163
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RIH9 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00966018
ProteinModelPortal:D6RIH9 SMR:D6RIH9 Ensembl:ENST00000510678
ArrayExpress:D6RIH9 Bgee:D6RIH9 Uniprot:D6RIH9
Length = 184
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RIT2 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 InterPro:IPR012996 Pfam:PF08080
HOGENOM:HOG000134241 IPI:IPI00966932 ProteinModelPortal:D6RIT2
SMR:D6RIT2 Ensembl:ENST00000503105 ArrayExpress:D6RIT2 Bgee:D6RIT2
Uniprot:D6RIT2
Length = 164
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RIU0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604 HGNC:HGNC:5041
ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00967216
ProteinModelPortal:D6RIU0 SMR:D6RIU0 Ensembl:ENST00000504348
ArrayExpress:D6RIU0 Bgee:D6RIU0 Uniprot:D6RIU0
Length = 168
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|D6RJ04 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 HOGENOM:HOG000134241 IPI:IPI00963924
ProteinModelPortal:D6RJ04 SMR:D6RJ04 Ensembl:ENST00000508103
ArrayExpress:D6RJ04 Bgee:D6RJ04 Uniprot:D6RJ04
Length = 172
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>UNIPROTKB|E7EQJ0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00977852
ProteinModelPortal:E7EQJ0 SMR:E7EQJ0 Ensembl:ENST00000521116
ArrayExpress:E7EQJ0 Bgee:E7EQJ0 Uniprot:E7EQJ0
Length = 115
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIELF 149
++ A+ KDR M HRY+E+F
Sbjct: 65 DEVKLALKKDRETMGHRYVEVF 86
>RGD|1308928 [details] [associations]
symbol:Rbm19 "RNA binding motif protein 19" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0040019 "positive regulation
of embryonic development" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1308928 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CH473973 IPI:IPI00777247 Ensembl:ENSRNOT00000060041
UCSC:RGD:1308928 Uniprot:D3ZUN0
Length = 451
Score = 123 (48.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 79 HTVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADVDFATHEDAMQAMSKD 137
+TV +RG PF E++V +F P+ PV + I +G +G VD ++ E+ +A+ +
Sbjct: 294 YTVKLRGAPFNVTEKNVLEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEEEVKKALKCN 353
Query: 138 RTNMQHRYIELF 149
R M RYIE+F
Sbjct: 354 REYMGGRYIEVF 365
>UNIPROTKB|H0YBR2 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000519505
Uniprot:H0YBR2
Length = 502
Score = 123 (48.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 194 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 253
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 254 RKHKDLLGKRYIELF 268
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 78 RHTVHMRGLPFRANERDVADFFRPVVP------VHVDIHYENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF VH+ ++++ GRPSG+A + + + A
Sbjct: 310 RDCIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQ-GRPSGDAFIQMKSADRAF 368
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + NM+ RY+E+F
Sbjct: 369 MAAQKCHKKNMKDRYVEVF 387
>UNIPROTKB|H0YBB3 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 Ensembl:ENST00000517610
Bgee:H0YBB3 Uniprot:H0YBB3
Length = 522
Score = 123 (48.4 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 187 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 246
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 247 RKHKDLLGKRYIELF 261
Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 78 RHTVHMRGLPFRANERDVADFFRPVVP------VHVDIHYENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF VH+ ++++ GRPSG+A + + + A
Sbjct: 303 RDCIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQ-GRPSGDAFIQMKSADRAF 361
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + NM+ RY+E+F
Sbjct: 362 MAAQKCHKKNMKDRYVEVF 380
>MGI|MGI:1921361 [details] [associations]
symbol:Rbm19 "RNA binding motif protein 19" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1921361 GO:GO:0007275 GO:GO:0005737 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0040019 eggNOG:COG0724 KO:K14787
HOGENOM:HOG000211156 OMA:VFREKNV GeneTree:ENSGT00700000104575
CTD:9904 HOVERGEN:HBG055637 OrthoDB:EOG4D7Z56 ChiTaRS:RBM19
EMBL:BC025619 EMBL:BC034010 EMBL:AK004657 EMBL:AK053511
IPI:IPI00165762 IPI:IPI00475221 RefSeq:NP_083038.1 UniGene:Mm.41022
PDB:1WHW PDB:1WHX PDB:2CPF PDB:2CPH PDBsum:1WHW PDBsum:1WHX
PDBsum:2CPF PDBsum:2CPH ProteinModelPortal:Q8R3C6 SMR:Q8R3C6
STRING:Q8R3C6 PhosphoSite:Q8R3C6 PaxDb:Q8R3C6 PRIDE:Q8R3C6
Ensembl:ENSMUST00000031590 GeneID:74111 KEGG:mmu:74111
UCSC:uc008zha.1 InParanoid:Q8R3C6 EvolutionaryTrace:Q8R3C6
NextBio:339804 Bgee:Q8R3C6 CleanEx:MM_RBM19 Genevestigator:Q8R3C6
Uniprot:Q8R3C6
Length = 952
Score = 126 (49.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 70 VNESSGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADVDFATHE 128
V++ + +TV +RG PF E++V +F P+ PV + I +G +G VD ++ E
Sbjct: 284 VSQKEPTTPYTVKLRGAPFNVTEKNVIEFLAPLKPVAIRIVRNAHGNKTGYVFVDLSSEE 343
Query: 129 DAMQAMSKDRTNMQHRYIELF 149
+ +A+ +R M RYIE+F
Sbjct: 344 EVKKALKCNRDYMGGRYIEVF 364
>RGD|1310855 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=IEA;ISO;ISS]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:1310855 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
eggNOG:NOG262593 HOGENOM:HOG000112401 OrthoDB:EOG49078K
EMBL:BC166804 IPI:IPI00359594 UniGene:Rn.231924
ProteinModelPortal:B2RYJ8 SMR:B2RYJ8 PhosphoSite:B2RYJ8
PRIDE:B2RYJ8 UCSC:RGD:1310855 ArrayExpress:B2RYJ8
Genevestigator:B2RYJ8 Uniprot:B2RYJ8
Length = 716
Score = 124 (48.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VD----IHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV DF P PV VD + + +GRP+G+A FA E A A+
Sbjct: 349 LRLRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAAL 408
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 409 RRHKGMLGKRYIELF 423
>UNIPROTKB|G3V8M2 [details] [associations]
symbol:Esrp2 "Epithelial-splicing regulatory protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 RGD:1310855 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098 EMBL:CH473972
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
UniGene:Rn.231924 RefSeq:NP_001100893.1 PRIDE:G3V8M2
Ensembl:ENSRNOT00000026873 GeneID:307810 KEGG:rno:307810
NextBio:657907 Uniprot:G3V8M2
Length = 717
Score = 124 (48.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VD----IHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV DF P PV VD + + +GRP+G+A FA E A A+
Sbjct: 350 LRLRGLPFSAGPADVLDFLGPECPVTGGVDGLLFVRHPDGRPTGDAFALFACEELAQAAL 409
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 410 RRHKGMLGKRYIELF 424
>UNIPROTKB|Q6NXG1 [details] [associations]
symbol:ESRP1 "Epithelial splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005886
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GO:GO:0043484 CTD:54845 eggNOG:NOG262593 KO:K14947 EMBL:BX647570
EMBL:AC108860 EMBL:AP005660 EMBL:BC019932 EMBL:BC067098
EMBL:BC099916 EMBL:BC112043 EMBL:AK000178 IPI:IPI00184262
IPI:IPI00654821 IPI:IPI00789651 IPI:IPI00797684 IPI:IPI00889741
RefSeq:NP_001030087.2 RefSeq:NP_001116297.1 RefSeq:NP_001116298.1
RefSeq:NP_001116299.1 RefSeq:NP_060167.2 UniGene:Hs.487471 PDB:2DHA
PDBsum:2DHA ProteinModelPortal:Q6NXG1 SMR:Q6NXG1 STRING:Q6NXG1
PhosphoSite:Q6NXG1 DMDM:124020999 PaxDb:Q6NXG1 PRIDE:Q6NXG1
Ensembl:ENST00000358397 Ensembl:ENST00000423620
Ensembl:ENST00000433389 Ensembl:ENST00000454170 GeneID:54845
KEGG:hsa:54845 UCSC:uc003ygq.4 UCSC:uc003ygr.4 UCSC:uc003ygt.4
UCSC:uc003ygv.3 GeneCards:GC08P095653 HGNC:HGNC:25966 HPA:HPA023719
HPA:HPA023720 MIM:612959 neXtProt:NX_Q6NXG1 PharmGKB:PA164719324
InParanoid:Q6NXG1 OMA:VAAMTEC ChiTaRS:ESRP1
EvolutionaryTrace:Q6NXG1 GenomeRNAi:54845 NextBio:57677
ArrayExpress:Q6NXG1 Bgee:Q6NXG1 CleanEx:HS_RBM35A
Genevestigator:Q6NXG1 Uniprot:Q6NXG1
Length = 681
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/75 (41%), Positives = 41/75 (54%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
V MRGLPF A +V FF P+ + + Y +GRP+G+A V FA E A A+
Sbjct: 328 VRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNAL 387
Query: 135 SKDRTNMQHRYIELF 149
K + + RYIELF
Sbjct: 388 RKHKDLLGKRYIELF 402
Score = 110 (43.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 78 RHTVHMRGLPFRANERDVADFFRPVVP------VHVDIHYENGRPSGEADVDFATHEDAM 131
R + +RGLP+ A D+ DF VH+ ++++ GRPSG+A + + + A
Sbjct: 444 RDCIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMVLNHQ-GRPSGDAFIQMKSADRAF 502
Query: 132 QAMSK-DRTNMQHRYIELF 149
A K + NM+ RY+E+F
Sbjct: 503 MAAQKCHKKNMKDRYVEVF 521
>UNIPROTKB|D6RDL0 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HOGENOM:HOG000220896 HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00964237
ProteinModelPortal:D6RDL0 SMR:D6RDL0 Ensembl:ENST00000515714
ArrayExpress:D6RDL0 Bgee:D6RDL0 Uniprot:D6RDL0
Length = 84
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIE 147
++ A+ KDR M HRY+E
Sbjct: 65 DEVKLALKKDRETMGHRYVE 84
>UNIPROTKB|E7EN40 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00981333
ProteinModelPortal:E7EN40 SMR:E7EN40 Ensembl:ENST00000523137
ArrayExpress:E7EN40 Bgee:E7EN40 Uniprot:E7EN40
Length = 166
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 73 SSGPSRHTVHMRGLPFRANERDVADFFRPV-VPVHVD----IHYENGRPSGEADVDFATH 127
+ G V +RGLP+ + +V FF + I+ GRPSGEA V+ +
Sbjct: 5 TEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESE 64
Query: 128 EDAMQAMSKDRTNMQHRYIE 147
++ A+ KDR M HRY+E
Sbjct: 65 DEVKLALKKDRETMGHRYVE 84
>UNIPROTKB|F1NVJ4 [details] [associations]
symbol:RBM12B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AADN02024868 IPI:IPI00599613 Ensembl:ENSGALT00000025676
ArrayExpress:F1NVJ4 Uniprot:F1NVJ4
Length = 415
Score = 112 (44.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 71 NESSGPSRHT-VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFAT 126
N S G R + ++ LPF+A ++ DFF V+P V + Y E G PSG+A V
Sbjct: 330 NFSGGSDRIVPIRLKNLPFKATPNEILDFFYGYRVIPESVSVQYNEQGLPSGDAIVAMTN 389
Query: 127 HEDAMQAMSK 136
+E+AM A+++
Sbjct: 390 YEEAMTAINE 399
>FB|FBgn0023441 [details] [associations]
symbol:fus "fusilli" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS;NAS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE013599 GO:GO:0005634
GO:GO:0007173 GO:GO:0008380 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 KO:K14947 HSSP:P55795 EMBL:AF321979
EMBL:BT025963 EMBL:BT003299 EMBL:BT023793 EMBL:AY052064
RefSeq:NP_524691.1 RefSeq:NP_725479.1 RefSeq:NP_725480.1
RefSeq:NP_725481.1 RefSeq:NP_725482.1 RefSeq:NP_725483.1
UniGene:Dm.7727 ProteinModelPortal:Q9BJZ5 SMR:Q9BJZ5
MINT:MINT-1023688 STRING:Q9BJZ5 PRIDE:Q9BJZ5
EnsemblMetazoa:FBtr0087343 EnsemblMetazoa:FBtr0087344
EnsemblMetazoa:FBtr0087346 GeneID:44095 KEGG:dme:Dmel_CG8205
UCSC:CG8205-RD CTD:2521 FlyBase:FBgn0023441 InParanoid:A1ZA30
OMA:KFRYIEV OrthoDB:EOG4866TJ PhylomeDB:Q9BJZ5 ChiTaRS:FUS
GenomeRNAi:44095 NextBio:836730 Bgee:Q9BJZ5 Uniprot:Q9BJZ5
Length = 967
Score = 116 (45.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHV-D-------IHYENGRPSGEADVDFATHEDA 130
+ MRGLP+ A + V DFF P HV D + +GR +G+A V FA DA
Sbjct: 382 IRMRGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFANETDA 441
Query: 131 MQAMSKDRTNMQHRYIELF 149
+A+ + R ++ RYIELF
Sbjct: 442 PKALGRHRESIGQRYIELF 460
>ZFIN|ZDB-GENE-031125-3 [details] [associations]
symbol:rbm19 "RNA binding motif protein 19"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0048546 "digestive
tract morphogenesis" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-031125-3 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0048546 HOGENOM:HOG000211156 HOVERGEN:HBG055637
EMBL:AY648773 IPI:IPI00654470 UniGene:Dr.79791
ProteinModelPortal:Q6DRI6 SMR:Q6DRI6 STRING:Q6DRI6 PRIDE:Q6DRI6
InParanoid:Q6DRI6 Bgee:Q6DRI6 Uniprot:Q6DRI6
Length = 927
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 80 TVHMRGLPFRANERDVADFFRPVVPVHVDI-HYENGRPSGEADVDFATHEDAMQAMSKDR 138
TV +RG PF E+ V +F P+ PV + +GR SG VD + + +A+ D+
Sbjct: 291 TVKLRGAPFNVKEQQVKEFMMPLKPVAIRFAKNSDGRNSGYVYVDLRSEAEVERALRLDK 350
Query: 139 TNMQHRYIELF 149
M RYIE+F
Sbjct: 351 DYMGGRYIEVF 361
>UNIPROTKB|E5RGH4 [details] [associations]
symbol:HNRNPH1 "Heterogeneous nuclear ribonucleoprotein H"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC136604
HGNC:HGNC:5041 ChiTaRS:HNRNPH1 IPI:IPI00982782
ProteinModelPortal:E5RGH4 SMR:E5RGH4 Ensembl:ENST00000521790
ArrayExpress:E5RGH4 Bgee:E5RGH4 Uniprot:E5RGH4
Length = 100
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 69 WVNESSGP-SRHT-----VHMRGLPFRANERDVADFFR--PVVPVHVDIHYE-NGRPSGE 119
WV + +GP S T V +RGLPF ++ ++ FF +VP + + + GR +GE
Sbjct: 18 WVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGE 77
Query: 120 ADVDFATHEDAMQAMSKDR 138
A V FA+ E A +A+ K +
Sbjct: 78 AFVQFASQEIAEKALKKHK 96
>UNIPROTKB|F1MSN9 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012337
InterPro:IPR012677 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484
GeneTree:ENSGT00620000087828 OMA:VIKQKYE EMBL:DAAA02046691
IPI:IPI00699877 UniGene:Bt.94194 Ensembl:ENSBTAT00000005736
NextBio:20869663 Uniprot:F1MSN9
Length = 717
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VD----IHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV F P PV D + + +GRP+G+A FA E A A+
Sbjct: 350 LRLRGLPFSAGPADVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAAL 409
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 410 RRHKGMLGKRYIELF 424
>MGI|MGI:1924661 [details] [associations]
symbol:Esrp2 "epithelial splicing regulatory protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0043484 "regulation of RNA splicing" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1924661 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 SUPFAM:SSF53098 GO:GO:0043484 eggNOG:NOG262593
GeneTree:ENSGT00620000087828 HOGENOM:HOG000112401 KO:K14947
HSSP:P55795 CTD:80004 OMA:VIKQKYE OrthoDB:EOG49078K EMBL:BC031444
EMBL:AK020578 IPI:IPI00276878 RefSeq:NP_789808.1 UniGene:Mm.183003
ProteinModelPortal:Q8K0G8 SMR:Q8K0G8 STRING:Q8K0G8
PhosphoSite:Q8K0G8 PaxDb:Q8K0G8 PRIDE:Q8K0G8
Ensembl:ENSMUST00000115979 GeneID:77411 KEGG:mmu:77411
UCSC:uc009nff.1 InParanoid:Q8K0G8 NextBio:346885 Bgee:Q8K0G8
CleanEx:MM_RBM35B Genevestigator:Q8K0G8 Uniprot:Q8K0G8
Length = 717
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VD----IHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV F P PV D + + +GRP+G+A FA E A A+
Sbjct: 350 LRLRGLPFSAGPTDVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAAL 409
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 410 RRHKGMLGKRYIELF 424
>UNIPROTKB|F1PA85 [details] [associations]
symbol:ESRP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012337 InterPro:IPR012677 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 SUPFAM:SSF53098
GeneTree:ENSGT00620000087828 KO:K14947 CTD:80004 OMA:VIKQKYE
EMBL:AAEX03004121 RefSeq:XP_851504.1 Ensembl:ENSCAFT00000032365
GeneID:489745 KEGG:cfa:489745 Uniprot:F1PA85
Length = 717
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH--VD----IHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV F P PV D + + +GRP+G+A FA E A A+
Sbjct: 350 LRLRGLPFSAGPADVLGFLGPECPVTGGADGLLFVRHPDGRPTGDAFALFACEELAQAAL 409
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 410 RRHKGILGKRYIELF 424
>UNIPROTKB|Q9H6T0 [details] [associations]
symbol:ESRP2 "Epithelial splicing regulatory protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043484 "regulation of
RNA splicing" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0005739 GO:GO:0005634 GO:GO:0005813
GO:GO:0008380 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0043484 eggNOG:NOG262593
HOGENOM:HOG000112401 KO:K14947 HSSP:Q9Z2X1 CTD:80004 OMA:VIKQKYE
OrthoDB:EOG49078K EMBL:AK025571 EMBL:AK025901 EMBL:BC030146
EMBL:AF289577 IPI:IPI00034099 IPI:IPI00827597 RefSeq:NP_079215.2
UniGene:Hs.436585 UniGene:Hs.592053 ProteinModelPortal:Q9H6T0
SMR:Q9H6T0 IntAct:Q9H6T0 STRING:Q9H6T0 PhosphoSite:Q9H6T0
DMDM:74761482 PaxDb:Q9H6T0 PRIDE:Q9H6T0 Ensembl:ENST00000473183
Ensembl:ENST00000565858 GeneID:80004 KEGG:hsa:80004 UCSC:uc002evq.1
UCSC:uc010cfa.1 GeneCards:GC16M068263 HGNC:HGNC:26152 HPA:HPA048597
MIM:612960 neXtProt:NX_Q9H6T0 PharmGKB:PA164719361
InParanoid:Q9H6T0 ChiTaRS:ESRP2 GenomeRNAi:80004 NextBio:70079
Bgee:Q9H6T0 CleanEx:HS_RBM35B Genevestigator:Q9H6T0 Uniprot:Q9H6T0
Length = 727
Score = 112 (44.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVH------VDIHYENGRPSGEADVDFATHEDAMQAM 134
+ +RGLPF A DV F P PV + + + +GRP+G+A FA E A A+
Sbjct: 360 LRLRGLPFSAGPTDVLGFLGPECPVTGGTEGLLFVRHPDGRPTGDAFALFACEELAQAAL 419
Query: 135 SKDRTNMQHRYIELF 149
+ + + RYIELF
Sbjct: 420 RRHKGMLGKRYIELF 434
>UNIPROTKB|E5RHG1 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00982580 ProteinModelPortal:E5RHG1
SMR:E5RHG1 Ensembl:ENST00000520560 ArrayExpress:E5RHG1 Bgee:E5RHG1
Uniprot:E5RHG1
Length = 122
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF + +H G GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGE-IGEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>UNIPROTKB|E5RJW8 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00980861 ProteinModelPortal:E5RJW8
SMR:E5RJW8 Ensembl:ENST00000521947 ArrayExpress:E5RJW8 Bgee:E5RJW8
Uniprot:E5RJW8
Length = 82
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF + +H G GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGE-IGEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>RGD|1593040 [details] [associations]
symbol:LOC679087 "similar to swan" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1593040
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087828 OrthoDB:EOG4NKBVV CTD:389677
IPI:IPI00765757 RefSeq:XP_001053414.1 RefSeq:XP_232819.3
ProteinModelPortal:D3ZM54 Ensembl:ENSRNOT00000061333 GeneID:313069
KEGG:rno:313069 NextBio:665610 Uniprot:D3ZM54
Length = 843
Score = 109 (43.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ ++GLPF A D+ FF+ + +H G+ +GEA + FAT EDA +A+S+
Sbjct: 5 IRLQGLPFIAGPVDIRHFFKGLTIPDGGVHVIGGK-AGEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>UNIPROTKB|J9NZV3 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
EMBL:AAEX03013911 Ensembl:ENSCAFT00000048972 Uniprot:J9NZV3
Length = 888
Score = 108 (43.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
Score = 106 (42.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V + G+PF A E DV DFF V VH+ + GR +G V F + +D +A+ ++R
Sbjct: 306 VSVHGMPFSAMENDVRDFFHGLRVDAVHL-LKDHVGRNNGNGLVKFLSPQDTFEALKRNR 364
Query: 139 TNMQHRYIEL 148
M RY+E+
Sbjct: 365 MLMIQRYVEV 374
>UNIPROTKB|Q9NTZ6 [details] [associations]
symbol:RBM12 "RNA-binding protein 12" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
EMBL:CH471077 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL109827 UniGene:Hs.700188 GermOnline:ENSG00000125976
eggNOG:NOG299235 HOVERGEN:HBG057691 EMBL:AJ289772 EMBL:AF345332
EMBL:AF345335 EMBL:AF393214 EMBL:AB018308 EMBL:AK092239
EMBL:BC012787 EMBL:BC013981 EMBL:AL834472 EMBL:AB015336
IPI:IPI00550308 RefSeq:NP_001185767.1 RefSeq:NP_001185769.1
RefSeq:NP_006038.2 RefSeq:NP_690051.1 PDB:1WEL PDB:2CPY PDB:2DNN
PDB:2EK1 PDB:2EK6 PDBsum:1WEL PDBsum:2CPY PDBsum:2DNN PDBsum:2EK1
PDBsum:2EK6 ProteinModelPortal:Q9NTZ6 SMR:Q9NTZ6 IntAct:Q9NTZ6
MINT:MINT-1366084 STRING:Q9NTZ6 PhosphoSite:Q9NTZ6 DMDM:30173387
PaxDb:Q9NTZ6 PeptideAtlas:Q9NTZ6 PRIDE:Q9NTZ6 DNASU:10137
Ensembl:ENST00000359646 Ensembl:ENST00000374104
Ensembl:ENST00000374114 GeneID:10137 KEGG:hsa:10137 UCSC:uc002xdq.3
CTD:10137 GeneCards:GC20M034236 HGNC:HGNC:9898 HPA:HPA043258
HPA:HPA043621 MIM:607179 neXtProt:NX_Q9NTZ6 PharmGKB:PA34261
InParanoid:Q9NTZ6 OMA:PVFLGPL OrthoDB:EOG44TP7C PhylomeDB:Q9NTZ6
EvolutionaryTrace:Q9NTZ6 GenomeRNAi:10137 NextBio:38349
ArrayExpress:Q9NTZ6 Bgee:Q9NTZ6 CleanEx:HS_RBM12
Genevestigator:Q9NTZ6 Uniprot:Q9NTZ6
Length = 932
Score = 108 (43.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V + G+PF A E DV DFF V VH+ + GR +G V F + +D +A+ ++R
Sbjct: 306 VSVHGMPFSAMENDVRDFFHGLRVDAVHL-LKDHVGRNNGNGLVKFLSPQDTFEALKRNR 364
Query: 139 TNMQHRYIEL 148
M RY+E+
Sbjct: 365 MLMIQRYVEV 374
>UNIPROTKB|F1P982 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:AAEX03013911 Ensembl:ENSCAFT00000013161
Uniprot:F1P982
Length = 945
Score = 108 (43.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 454 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRH 513
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 514 KQYMGNRFIQV 524
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V + G+PF A E DV DFF V VH+ + GR +G V F + +D +A+ ++R
Sbjct: 328 VSVHGMPFSAMENDVRDFFHGLRVDAVHL-LKDHVGRNNGNGLVKFLSPQDTFEALKRNR 386
Query: 139 TNMQHRYIEL 148
M RY+E+
Sbjct: 387 MLMIQRYVEV 396
>UNIPROTKB|F1MND5 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00620000087828 CTD:10137 OMA:PVFLGPL
EMBL:DAAA02036525 IPI:IPI00924418 RefSeq:NP_001185821.1
UniGene:Bt.91136 Ensembl:ENSBTAT00000061188 GeneID:100138139
KEGG:bta:100138139 NextBio:20789665 Uniprot:F1MND5
Length = 953
Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
Score = 106 (42.4 bits), Expect = 0.00010, P = 0.00010
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDR 138
V + G+PF A E DV DFF V VH+ + GR +G V F + +D +A+ ++R
Sbjct: 306 VSVHGMPFSAMENDVRDFFHGLRVDAVHL-LKDHVGRNNGNGLVKFLSPQDTFEALKRNR 364
Query: 139 TNMQHRYIEL 148
M RY+E+
Sbjct: 365 MLMIQRYVEV 374
>UNIPROTKB|I3LLW0 [details] [associations]
symbol:RBM12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:PVFLGPL EMBL:CU210870 EMBL:CU914282 Ensembl:ENSSSCT00000023753
Ensembl:ENSSSCT00000028045 Uniprot:I3LLW0
Length = 955
Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 454 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALCRH 513
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 514 KQYMGNRFIQV 524
>MGI|MGI:1922960 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1922960 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AL833786 UniGene:Mm.27660
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AF345334 EMBL:AF393215 EMBL:AF393216 EMBL:AK017591
EMBL:AK029180 EMBL:AK035014 EMBL:AK080772 EMBL:AK166833
EMBL:BC026891 EMBL:BC027810 EMBL:BC052473 IPI:IPI00322263
RefSeq:NP_083673.3 RefSeq:NP_733486.2 UniGene:Mm.441281 PDB:2CQP
PDBsum:2CQP ProteinModelPortal:Q8R4X3 SMR:Q8R4X3 IntAct:Q8R4X3
STRING:Q8R4X3 PhosphoSite:Q8R4X3 PRIDE:Q8R4X3
Ensembl:ENSMUST00000059647 Ensembl:ENSMUST00000109604 GeneID:75710
KEGG:mmu:75710 UCSC:uc008nmh.1 InParanoid:Q3TKT7 ChiTaRS:RBM12
EvolutionaryTrace:Q8R4X3 NextBio:343756 Bgee:Q8R4X3
CleanEx:MM_RBM12 Genevestigator:Q8R4X3
GermOnline:ENSMUSG00000038171 Uniprot:Q8R4X3
Length = 992
Score = 107 (42.7 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
>UNIPROTKB|D4A116 [details] [associations]
symbol:Rbm12 "Protein Rbm12" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC118414 IPI:IPI00560597 Ensembl:ENSRNOT00000026700
ArrayExpress:D4A116 Uniprot:D4A116
Length = 1003
Score = 107 (42.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
>RGD|1594333 [details] [associations]
symbol:Rbm12 "RNA binding motif protein 12" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1594333 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:CH474050 eggNOG:NOG299235
GeneTree:ENSGT00620000087828 HOVERGEN:HBG057691 CTD:10137
OMA:PVFLGPL EMBL:AC118414 EMBL:AY226099 IPI:IPI00421433
RefSeq:NP_001032746.1 UniGene:Rn.7119 SMR:Q6XLI7
Ensembl:ENSRNOT00000047246 GeneID:652928 KEGG:rno:652928
UCSC:RGD:1594333 HOGENOM:HOG000143525 InParanoid:Q6XLI7
NextBio:714873 Genevestigator:Q6XLI7 Uniprot:Q6XLI7
Length = 1032
Score = 107 (42.7 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V+++GLPF A + V DFF+ +V + I Y NG+ +GE V+F D A+ +
Sbjct: 432 VYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNDADYKAALCRH 491
Query: 138 RTNMQHRYIEL 148
+ M +R+I++
Sbjct: 492 KQYMGNRFIQV 502
>FB|FBgn0035235 [details] [associations]
symbol:CG7879 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:AE014296
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000381
GeneTree:ENSGT00620000087828 FlyBase:FBgn0035235 RefSeq:NP_647626.1
RefSeq:NP_728631.1 UniGene:Dm.21365 SMR:Q9W0D6 IntAct:Q9W0D6
MINT:MINT-286284 EnsemblMetazoa:FBtr0072826
EnsemblMetazoa:FBtr0072827 GeneID:38184 KEGG:dme:Dmel_CG7879
UCSC:CG7879-RA InParanoid:Q9W0D6 OMA:RAEMQKV GenomeRNAi:38184
NextBio:807399 Uniprot:Q9W0D6
Length = 985
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ ++ LP+ AN RD+ +FF + +H G G+A + F+T EDA AM KDR
Sbjct: 5 IRLQNLPWTANARDIRNFFSGLSIPEGGVHIIGGE-MGDAFIAFSTDEDARCAMLKDREK 63
Query: 141 MQHRYIELFLN 151
+ + L L+
Sbjct: 64 LMEIQVRLLLS 74
>UNIPROTKB|E5RJ83 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00982018 ProteinModelPortal:E5RJ83
SMR:E5RJ83 Ensembl:ENST00000518597 ArrayExpress:E5RJ83 Bgee:E5RJ83
Uniprot:E5RJ83
Length = 143
Score = 98 (39.6 bits), Expect = 0.00011, P = 0.00011
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF + +H G GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGE-IGEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>UNIPROTKB|E5RJV8 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AC010834
HGNC:HGNC:32310 IPI:IPI00981453 ProteinModelPortal:E5RJV8
SMR:E5RJV8 Ensembl:ENST00000519109 ArrayExpress:E5RJV8 Bgee:E5RJV8
Uniprot:E5RJV8
Length = 149
Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF + +H G GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGE-IGEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>CGD|CAL0002736 [details] [associations]
symbol:NOP4 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 CGD:CAL0002736 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0035690 EMBL:AACQ01000272
EMBL:AACQ01000273 eggNOG:COG0724 KO:K14573 RefSeq:XP_710406.1
RefSeq:XP_710417.1 ProteinModelPortal:Q59KZ0 STRING:Q59KZ0
GeneID:3647980 GeneID:3647991 KEGG:cal:CaO19.12665
KEGG:cal:CaO19.5198 Uniprot:Q59KZ0
Length = 741
Score = 105 (42.0 bits), Expect = 0.00020, P = 0.00020
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 71 NESSGPSRHTVHMRGLPFRANERDVADFFRPVVPV-HVDIHYENGRPS-GEADVDFATHE 128
N+ G R T+ +R +PF A ++++FF VPV H I +N R S G V F +
Sbjct: 25 NQDDGLDRKTLFVRSIPFEATSEELSEFFSQFVPVKHAVIVTDNERKSRGFGFVSFTLDD 84
Query: 129 DAMQAMSKDR-TNMQHRYIEL 148
D + A+ + R T + R + +
Sbjct: 85 DCLTALVESRKTKFKDRLLRV 105
>UNIPROTKB|Q59KZ0 [details] [associations]
symbol:NOP4 "Putative uncharacterized protein NOP4"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
CGD:CAL0002736 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0035690 EMBL:AACQ01000272 EMBL:AACQ01000273 eggNOG:COG0724
KO:K14573 RefSeq:XP_710406.1 RefSeq:XP_710417.1
ProteinModelPortal:Q59KZ0 STRING:Q59KZ0 GeneID:3647980
GeneID:3647991 KEGG:cal:CaO19.12665 KEGG:cal:CaO19.5198
Uniprot:Q59KZ0
Length = 741
Score = 105 (42.0 bits), Expect = 0.00020, P = 0.00020
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 71 NESSGPSRHTVHMRGLPFRANERDVADFFRPVVPV-HVDIHYENGRPS-GEADVDFATHE 128
N+ G R T+ +R +PF A ++++FF VPV H I +N R S G V F +
Sbjct: 25 NQDDGLDRKTLFVRSIPFEATSEELSEFFSQFVPVKHAVIVTDNERKSRGFGFVSFTLDD 84
Query: 129 DAMQAMSKDR-TNMQHRYIEL 148
D + A+ + R T + R + +
Sbjct: 85 DCLTALVESRKTKFKDRLLRV 105
>UNIPROTKB|E5RI26 [details] [associations]
symbol:ESRP1 "Epithelial-splicing regulatory protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC108860
EMBL:AP005660 HGNC:HGNC:25966 ChiTaRS:ESRP1 IPI:IPI00889667
ProteinModelPortal:E5RI26 SMR:E5RI26 Ensembl:ENST00000522756
ArrayExpress:E5RI26 Bgee:E5RI26 Uniprot:E5RI26
Length = 94
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHYE-NGRPSGEADVDFATHEDAMQAMSKD 137
V RGLP++++++D+A FF+ + + GR +GEA V F + E A+ +
Sbjct: 10 VRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRH 69
Query: 138 RTNMQHRYIELF 149
+ +M RYIE++
Sbjct: 70 KHHMGTRYIEVY 81
>ZFIN|ZDB-GENE-081022-16 [details] [associations]
symbol:rbm12 "RNA binding motif protein 12"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-081022-16 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 HOVERGEN:HBG057691 CTD:10137 HOGENOM:HOG000143525
EMBL:BC162102 EMBL:BC162473 EMBL:AY226101 IPI:IPI00483025
RefSeq:NP_001003856.1 UniGene:Dr.133225 SMR:Q6XLI5 GeneID:445379
KEGG:dre:445379 NextBio:20832083 Uniprot:Q6XLI5
Length = 876
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 74 SGPSRHTVHMRGLPFRANERDVADFFRPVVPVHVDIHYEN-GRPSGEADVDFATHEDAMQ 132
+ P VH+ GLPF E ++ DFF + + + +N GR SG A V F + ++ +
Sbjct: 297 TNPDDFYVHLHGLPFSVLEHEIRDFFHGLGIESIRLLKDNLGRNSGRALVKFYSPHESFE 356
Query: 133 AMSKDRTNMQHRYIEL 148
A+ ++ + RYIE+
Sbjct: 357 ALKRNAGMIGQRYIEV 372
>UNIPROTKB|B9ZVT1 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC010834 HOGENOM:HOG000231575
HGNC:HGNC:32310 IPI:IPI00217626 ProteinModelPortal:B9ZVT1
SMR:B9ZVT1 PRIDE:B9ZVT1 Ensembl:ENST00000517700 ArrayExpress:B9ZVT1
Bgee:B9ZVT1 Uniprot:B9ZVT1
Length = 881
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 75 GPSRHT-VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDA 130
G R T + + LPF+AN ++ DFF ++P V I Y E G P+GEA V + +A
Sbjct: 800 GSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTGEAIVAMINYNEA 859
Query: 131 MQAMSKD 137
M A+ KD
Sbjct: 860 MAAI-KD 865
>UNIPROTKB|Q8IXT5 [details] [associations]
symbol:RBM12B "RNA-binding protein 12B" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:NOG299235 EMBL:AC010834 HOGENOM:HOG000231575
HOVERGEN:HBG057691 OMA:EHFRRPP OrthoDB:EOG4NKBVV IPI:IPI00871780
RefSeq:NP_976324.2 UniGene:Hs.606916 HSSP:Q9NTZ6
ProteinModelPortal:Q8IXT5 SMR:Q8IXT5 IntAct:Q8IXT5 STRING:Q8IXT5
PhosphoSite:Q8IXT5 DMDM:215273872 PaxDb:Q8IXT5 PRIDE:Q8IXT5
Ensembl:ENST00000399300 GeneID:389677 KEGG:hsa:389677
UCSC:uc003yfz.3 CTD:389677 GeneCards:GC08M094813 H-InvDB:HIX0025665
HGNC:HGNC:32310 HPA:HPA024398 neXtProt:NX_Q8IXT5
PharmGKB:PA142671098 GenomeRNAi:389677 NextBio:103029
ArrayExpress:Q8IXT5 Bgee:Q8IXT5 CleanEx:HS_RBM12B
Genevestigator:Q8IXT5 Uniprot:Q8IXT5
Length = 1001
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 75 GPSRHT-VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDA 130
G R T + + LPF+AN ++ DFF ++P V I Y E G P+GEA V + +A
Sbjct: 920 GSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYNEQGLPTGEAIVAMINYNEA 979
Query: 131 MQAMSKD 137
M A+ KD
Sbjct: 980 MAAI-KD 985
>ZFIN|ZDB-GENE-030131-6428 [details] [associations]
symbol:zgc:56148 "zgc:56148" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-6428 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00620000087828 EMBL:BX321920
IPI:IPI00491398 Ensembl:ENSDART00000111912 ArrayExpress:E7F6E2
Bgee:E7F6E2 Uniprot:E7F6E2
Length = 665
Score = 104 (41.7 bits), Expect = 0.00044, P = 0.00044
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 72 ESSGPSRHTVHMR--GLPFRANERDVADFFRPV-VPVHVDIHYENGRPSGEADVDFATHE 128
+ P R V+++ G+PF A + +V +FF + V + + G SG + V F T E
Sbjct: 147 DGDAPERAEVYLKLTGMPFSATKDNVHNFFAGLKVDDILFLKNPRGMFSGNSMVRFTTKE 206
Query: 129 DAMQAMSKDRTNMQHRYIEL 148
DA++ + +DR M RYI++
Sbjct: 207 DAIEGLKRDRQYMGSRYIQI 226
>UNIPROTKB|F1RY40 [details] [associations]
symbol:RBM12B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:EHFRRPP CTD:389677 EMBL:CU633952 RefSeq:XP_003125614.1
UniGene:Ssc.32661 Ensembl:ENSSSCT00000006702 GeneID:100514101
KEGG:ssc:100514101 Uniprot:F1RY40
Length = 986
Score = 103 (41.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 81 VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
+ + LPF+AN ++ DFF V+P V I Y E G P+GEA V + +AM A+ KD
Sbjct: 912 IKIMNLPFKANVNEILDFFHGYRVIPDSVSIQYNEQGLPTGEAIVAMINYNEAMAAI-KD 970
Score = 33 (16.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 2 RPVSGGFGRPAPYD 15
RP G F RP D
Sbjct: 638 RPPEGDFRRPPEED 651
>UNIPROTKB|E2RRS5 [details] [associations]
symbol:RBM12B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00620000087828
OMA:EHFRRPP CTD:389677 EMBL:AAEX03015951 RefSeq:XP_544177.3
Ensembl:ENSCAFT00000014490 GeneID:487048 KEGG:cfa:487048
NextBio:20860720 Uniprot:E2RRS5
Length = 994
Score = 104 (41.7 bits), Expect = 0.00072, P = 0.00072
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 70 VNESSGPSRHT-VHMRGLPFRANERDVADFFRP--VVPVHVDIHY-ENGRPSGEADVDFA 125
+N SSG R T + + LPF+AN ++ DFF ++P V I Y E G P+GEA V
Sbjct: 910 LNCSSG--RVTPIKIMNLPFKANVNEILDFFHGYRILPDSVSIQYNEQGLPTGEAIVAMI 967
Query: 126 THEDAMQAMSKD 137
+ +AM A+ KD
Sbjct: 968 NYNEAMAAI-KD 978
>MGI|MGI:1924854 [details] [associations]
symbol:Rbm12b2 "RNA binding motif protein 12 B2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1924854 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
HSSP:Q8R4X3 eggNOG:NOG299235 GeneTree:ENSGT00620000087828
HOGENOM:HOG000231575 HOVERGEN:HBG057691 OrthoDB:EOG4NKBVV
EMBL:AK080943 EMBL:AK169895 EMBL:AL772167 EMBL:BC030408
EMBL:BC080741 IPI:IPI00471450 IPI:IPI00828825 RefSeq:NP_945195.1
UniGene:Mm.474129 UniGene:Mm.483494 ProteinModelPortal:Q66JV4
SMR:Q66JV4 STRING:Q66JV4 PhosphoSite:Q66JV4 PRIDE:Q66JV4
Ensembl:ENSMUST00000063839 Ensembl:ENSMUST00000095143 GeneID:77604
KEGG:mmu:77604 UCSC:uc008san.2 CTD:77604 InParanoid:A2AJP4
NextBio:347196 Bgee:Q66JV4 CleanEx:MM_C430048L16RIK
Genevestigator:Q66JV4 Uniprot:Q66JV4
Length = 834
Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 81 VHMRGLPFRANERDVADFFR--PVVPVHVDIHY-ENGRPSGEADVDFATHEDAMQAMSKD 137
V + LPF+AN ++ DFF V+P V I Y E G P GEA V + +A+ A+ KD
Sbjct: 760 VMISNLPFKANANEILDFFHGYKVIPDSVSIQYNEEGLPLGEAIVSMTNYNEALSAV-KD 818
Score = 103 (41.3 bits), Expect = 0.00093, P = 0.00093
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF+ + +H G+ GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFKGLTIPDGGVHIIGGKV-GEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
>MGI|MGI:1919647 [details] [associations]
symbol:Rbm12b1 "RNA binding motif protein 12 B1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1919647 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
HSSP:Q8R4X3 eggNOG:NOG299235 GeneTree:ENSGT00620000087828
EMBL:AL929413 EMBL:AK013872 EMBL:AK031339 EMBL:BC050844
EMBL:BC054081 IPI:IPI00134417 RefSeq:NP_082502.2 UniGene:Mm.430709
UniGene:Mm.490798 ProteinModelPortal:Q80YR9 SMR:Q80YR9
STRING:Q80YR9 PhosphoSite:Q80YR9 PRIDE:Q80YR9
Ensembl:ENSMUST00000050069 Ensembl:ENSMUST00000069128 GeneID:72397
KEGG:mmu:72397 UCSC:uc008sam.1 CTD:72397 HOGENOM:HOG000231575
HOVERGEN:HBG057691 InParanoid:B1AZ74 OMA:EHFRRPP OrthoDB:EOG4NKBVV
NextBio:336186 Bgee:Q80YR9 Genevestigator:Q80YR9 Uniprot:Q80YR9
Length = 836
Score = 103 (41.3 bits), Expect = 0.00094, P = 0.00094
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 81 VHMRGLPFRANERDVADFFRPVVPVHVDIHYENGRPSGEADVDFATHEDAMQAMSKDRTN 140
+ + GLPF A D+ FF+ + +H G+ GEA + FAT EDA +A+S+
Sbjct: 5 IRLLGLPFIAGPVDIRHFFKGLTIPDGGVHIIGGKV-GEAFIIFATDEDARRAISRSGGF 63
Query: 141 MQHRYIELFLN 151
++ +ELFL+
Sbjct: 64 IKDSSVELFLS 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 232 145 0.00071 103 3 11 22 0.45 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 140
No. of states in DFA: 586 (62 KB)
Total size of DFA: 151 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.75u 0.09s 12.84t Elapsed: 00:00:01
Total cpu time: 12.77u 0.10s 12.87t Elapsed: 00:00:01
Start: Thu Aug 15 15:22:11 2013 End: Thu Aug 15 15:22:12 2013
WARNINGS ISSUED: 1