BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3734
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332029859|gb|EGI69728.1| Homeobox protein aristaless [Acromyrmex echinatior]
Length = 248
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 63/108 (58%), Gaps = 16/108 (14%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT +G A
Sbjct: 150 SEAEADDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRSGPAATV------- 200
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRI-------EVEIKFIPNDLVI 153
LV N + Y G + +VY + E E K IPN+ +
Sbjct: 201 WVLVINEDGREYAERGEAGRVSVVYGQAKLEPNLSEEENKAIPNEFSV 248
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+GE ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 69 SDGEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 118
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 119 IGLTEAR-IQVW 129
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 64/96 (66%), Gaps = 14/96 (14%)
Query: 29 DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFS 88
DS +E L+ +G S ++ SE E++++A PKRKQRRYRTTFTSFQLEELEKAF+
Sbjct: 110 DSMAEGGTLDPVG---SSNASDNNSECELDEFA--PKRKQRRYRTTFTSFQLEELEKAFA 164
Query: 89 RTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RTHYPDVFT + L MK+ L + R +Q +
Sbjct: 165 RTHYPDVFT--------REELAMKIGLTEAR-IQVW 191
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E++DYA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L MK
Sbjct: 57 SDCEVDDYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAMK 106
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 107 IGLTEAR-IQVW 117
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 15/85 (17%)
Query: 44 SSGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTST 99
+SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT
Sbjct: 59 ASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT-- 114
Query: 100 GSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L MK+ L + R +Q +
Sbjct: 115 ------REELAMKIGLTEAR-IQVW 132
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 20/93 (21%)
Query: 41 GVPS-----SGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
G PS SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTH
Sbjct: 51 GAPSGASGASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTH 108
Query: 92 YPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
YPDVFT + L MK+ L + R +Q +
Sbjct: 109 YPDVFT--------REELAMKIGLTEAR-IQVW 132
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 20/93 (21%)
Query: 41 GVPS-----SGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
G PS SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTH
Sbjct: 51 GAPSGASGASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTH 108
Query: 92 YPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
YPDVFT + L MK+ L + R +Q +
Sbjct: 109 YPDVFT--------REELAMKIGLTEAR-IQVW 132
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 20/93 (21%)
Query: 41 GVPS-----SGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
G PS SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTH
Sbjct: 51 GAPSGASGASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTH 108
Query: 92 YPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
YPDVFT + L MK+ L + R +Q +
Sbjct: 109 YPDVFT--------REELAMKIGLTEAR-IQVW 132
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 27 SEAEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 76
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 77 IGLTEAR-IQVW 87
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 77/132 (58%), Gaps = 26/132 (19%)
Query: 6 LTNLILILSEYSRTGSYSHHSAEDSPSELSDL-NRMGV-----PSSG-------RGEEDV 52
++NL+ + + + GS + P+E + + MG+ PS+G + D
Sbjct: 25 ISNLVDV--DENHKGSIDQNGGHLEPAEQKETPDNMGISEEITPSAGIEPRTLQADQSDG 82
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFT + L MK
Sbjct: 83 SEAETDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFT--------REELAMK 132
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 133 IGLTEAR-IQVW 143
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE +++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 150 SEADVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 199
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 200 IGLTEAR-IQVW 210
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 144 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 193
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 194 IGLTEAR-IQVW 204
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 26 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 75
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 76 IGLTEAR-IQVW 86
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 57/90 (63%), Gaps = 17/90 (18%)
Query: 41 GVPSSGRG------EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 94
VPS G + S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPD
Sbjct: 41 AVPSGASGGTNSPISDPNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 98
Query: 95 VFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
VFT + L MK+ L + R +Q +
Sbjct: 99 VFT--------REELAMKIGLTEAR-IQVW 119
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 26 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 75
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 76 IGLTEAR-IQVW 86
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 56 SDCETDEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 105
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 106 IGLTEAR-IQVW 116
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 72 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 121
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 122 IGLTEAR-IQVW 132
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 51/72 (70%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L MK
Sbjct: 59 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAMK 108
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 109 IGLTEAR-IQVW 119
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 70 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 119
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 120 IGLTEAR-IQVW 130
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 70 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 119
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 120 IGLTEAR-IQVW 130
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 52/72 (72%), Gaps = 11/72 (15%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK
Sbjct: 78 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMK 127
Query: 113 LDLVKNRPVQTY 124
+ L + R +Q +
Sbjct: 128 IGLTEAR-IQVW 138
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ + EGE++++A PKRKQRRYRTTFTSFQLEELEKAF+RTHYPDVFT
Sbjct: 83 DHNSEEGELDEFA--PKRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFT 129
>gi|270008150|gb|EFA04598.1| aristaless [Tribolium castaneum]
Length = 182
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 60/96 (62%), Gaps = 11/96 (11%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
G D S+ E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFT
Sbjct: 46 GPDNSDGSDPEPDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFT-------- 95
Query: 106 KPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
+ L MK+ L + R +Q V GR+ Y +E
Sbjct: 96 REELAMKIGLTEAR-IQVGVVKTAGRESHARYAFLE 130
>gi|322780040|gb|EFZ09800.1| hypothetical protein SINV_11608 [Solenopsis invicta]
Length = 130
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 41/45 (91%), Gaps = 2/45 (4%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
SE E +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT
Sbjct: 87 SEAEADDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 129
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 11/79 (13%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
G D S+ E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFT
Sbjct: 74 GPDNSDGSDPEPDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREE----- 126
Query: 106 KPFLLMKLDLVKNRPVQTY 124
L MK+ L + R +Q +
Sbjct: 127 ---LAMKIGLTEAR-IQVW 141
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 20/102 (19%)
Query: 28 EDSPSELSDLNRMGV-----PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEE 82
+DSP +L+R P G + D + +D+A PKRKQRRYRTTFTSFQLEE
Sbjct: 87 DDSPRTTPELSRNDQSPSERPPPGSADSD----DPDDFA--PKRKQRRYRTTFTSFQLEE 140
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LEKAFSRTHYPDVFT + L MK+ L + R +Q +
Sbjct: 141 LEKAFSRTHYPDVFT--------REELAMKIGLTEAR-IQVW 173
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 61/112 (54%), Gaps = 25/112 (22%)
Query: 13 LSEYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYR 72
L + TG S D S LSD P S G +D + PKRKQRRYR
Sbjct: 40 LERSASTGQLMGSSGGDPNSPLSD------PHSDDGGDDFA----------PKRKQRRYR 83
Query: 73 TTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
TTFTSFQLEELEKAFSRTHYPDVFT + L MK+ L + R +Q +
Sbjct: 84 TTFTSFQLEELEKAFSRTHYPDVFT--------REELAMKIGLTEAR-IQVW 126
>gi|170052026|ref|XP_001862034.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872990|gb|EDS36373.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 219
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
P+S ++ +G ++++ PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT
Sbjct: 116 PNSPMSDQHSDDGGVDEFQ--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT----- 168
Query: 103 AVFKPFLLMKLDLVKNR 119
+ L MK+ L + R
Sbjct: 169 ---REELAMKIGLTEAR 182
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKN--RPV 121
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTS + + L+ + + + RP
Sbjct: 78 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSHRPMGISDEGKLLGAEDIPHEARPP 137
Query: 122 Q 122
Q
Sbjct: 138 Q 138
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 42/56 (75%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK+ L + R
Sbjct: 193 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMKIGLTEAR 240
>gi|156356366|ref|XP_001623896.1| predicted protein [Nematostella vectensis]
gi|156210636|gb|EDO31796.1| predicted protein [Nematostella vectensis]
Length = 93
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S E+E S KRKQRRYRTTFTS+QLEELE+AF++THYPDVFT + L +K
Sbjct: 16 SNNELEGKDSTAKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFT--------REALAVK 67
Query: 113 LDLVKNRPVQTY 124
+DL + R VQ +
Sbjct: 68 IDLTEAR-VQVW 78
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 60/98 (61%), Gaps = 11/98 (11%)
Query: 28 EDSPSELSDLNRMG-VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKA 86
+DSP +L+ P+S R ++ + D + PKRKQRRYRTTFTSFQLEELEKA
Sbjct: 9 DDSPRTTPELSHADQSPASERPPPGSADSDDADEFA-PKRKQRRYRTTFTSFQLEELEKA 67
Query: 87 FSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
FSRTHYPDVFT L MK+ L + R +Q +
Sbjct: 68 FSRTHYPDVFTREE--------LAMKIGLTEAR-IQVW 96
>gi|241254920|ref|XP_002404118.1| homeobox protein arx, putative [Ixodes scapularis]
gi|215496594|gb|EEC06234.1| homeobox protein arx, putative [Ixodes scapularis]
Length = 206
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 42/57 (73%), Gaps = 5/57 (8%)
Query: 44 SSGRGE---EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
SSGR S EM D PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFT
Sbjct: 151 SSGRASMLMRPDSPQEMTD--DFPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFT 205
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 66/119 (55%), Gaps = 28/119 (23%)
Query: 25 HSAEDSPSEL------SDLNRMGVP-SSGRGEED-------VSEGEMEDYASL-----PK 65
H EDS SE SDL G P SSG ED G++ A + K
Sbjct: 117 HEGEDSGSESDCGPLGSDLPPCGSPTSSGAVHEDKLNDLCDSINGQVNSLAGIDLENGGK 176
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RKQRRYRTTFTS+QLEELE+AF++THYPDVFT + L M++DL + R VQ +
Sbjct: 177 RKQRRYRTTFTSYQLEELERAFAKTHYPDVFT--------REELAMRVDLTEAR-VQVW 226
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L MK+ L + R +Q
Sbjct: 43 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAMKIGLTEAR-IQV 93
Query: 124 Y 124
+
Sbjct: 94 W 94
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P+RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L +++DL + R VQ
Sbjct: 71 PRRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAVRVDLTEAR-VQV 121
Query: 124 Y 124
+
Sbjct: 122 W 122
>gi|290789888|pdb|3A01|B Chain B, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
gi|290789892|pdb|3A01|F Chain F, Crystal Structure Of Aristaless And Clawless Homeodomains
Bo
Length = 67
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L MK+ L + R +Q
Sbjct: 2 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAMKIGLTEAR-IQV 52
Query: 124 Y 124
+
Sbjct: 53 W 53
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 9/62 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
PKRKQRRYRTTFTS+QLEELEKAF +THYPDVFT + L M++DL + R VQ
Sbjct: 49 FPKRKQRRYRTTFTSYQLEELEKAFGKTHYPDVFT--------REELAMRVDLTEAR-VQ 99
Query: 123 TY 124
+
Sbjct: 100 VW 101
>gi|389614437|dbj|BAM20266.1| aristaless, partial [Papilio xuthus]
Length = 80
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT L MK+ L + R +Q
Sbjct: 4 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE--------LAMKIGLTEAR-IQV 54
Query: 124 Y 124
+
Sbjct: 55 W 55
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 15/99 (15%)
Query: 41 GVPSSGRGEEDV-SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTST 99
G P R D+ + ++EDY KRKQRRYRTTFTSFQLEELE+AF +THYPDVF
Sbjct: 92 GSPIDFRSSADLYGDRDIEDYG---KRKQRRYRTTFTSFQLEELERAFQKTHYPDVF--- 145
Query: 100 GSIAVFKPFLLMKLDLVKNRPVQTYVAY--GTGRKKDLV 136
+ L M++DL + R VQ + RKK+ V
Sbjct: 146 -----MREELAMRIDLTEAR-VQVWFQNRRAKWRKKEKV 178
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 12/79 (15%)
Query: 48 GEEDV--SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
GEE V S G + L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 271 GEESVCLSAGSDSEEGML-KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT-------- 321
Query: 106 KPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 322 REELAMRLDLTEAR-VQVW 339
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 15/102 (14%)
Query: 40 MGVPSSGRGEED---VSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
+ P + +ED +S+G+ D + KRKQRRYRTTFTSFQLEELE+AF +THYPDVF
Sbjct: 169 IQAPKEVKVQEDNLSISDGDG-DLDEMGKRKQRRYRTTFTSFQLEELERAFQKTHYPDVF 227
Query: 97 TSTGSIAVFKPFLLMKLDLVKNRPVQTYVAY--GTGRKKDLV 136
T + L M+++L + R VQ + RKK+ V
Sbjct: 228 T--------REELAMRINLTEAR-VQVWFQNRRAKWRKKEKV 260
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 17/85 (20%)
Query: 48 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTST 99
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 194 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT-- 251
Query: 100 GSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 252 ------REELAMRLDLTEAR-VQVW 269
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 227 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 277
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 282 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 332
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 12/64 (18%)
Query: 34 LSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYP 93
+ D++R P SG G +D ED +P+RKQRRYRTTFTS+QL+ELEKAF RTHYP
Sbjct: 16 VHDIDR---PGSGSGVDD------ED---IPRRKQRRYRTTFTSYQLDELEKAFGRTHYP 63
Query: 94 DVFT 97
DVFT
Sbjct: 64 DVFT 67
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 240 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 290
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 290 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 340
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHY 92
D+ PS + D S G + ++ S KRKQRRYRTTFT+FQLEELE +F +THY
Sbjct: 40 DVTGCDSPSDRCDDNDQSSGSLSTDQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTHY 99
Query: 93 PDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
PDVF F+ L M++DL + R VQ +
Sbjct: 100 PDVF--------FREELAMRIDLTEAR-VQVW 122
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 298 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 348
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 17/85 (20%)
Query: 48 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTST 99
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 194 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT-- 251
Query: 100 GSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 252 ------REELAMRLDLTEAR-VQVW 269
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 17/85 (20%)
Query: 48 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTST 99
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 193 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT-- 250
Query: 100 GSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 251 ------REELAMRLDLTEAR-VQVW 268
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 290 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 340
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 143 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 193
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 217 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 267
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 327 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 377
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 141 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 191
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 9/55 (16%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P SG G +D ED +P+RKQRRYRTTFTS+QL+ELEKAF RTHYPDVFT
Sbjct: 22 PGSGSGMDD------ED---IPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFT 67
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 333 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 383
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 187 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 237
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 218 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 268
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 8/78 (10%)
Query: 42 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGS 101
P + R +++ + + L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 52 APLASRADQEKAVQGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT---- 107
Query: 102 IAVFKPFLLMKLDLVKNR 119
+ L M+LDL + R
Sbjct: 108 ----REELAMRLDLTEAR 121
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 9/73 (12%)
Query: 48 GEEDVSEGEMEDYAS-LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFK 106
GEE V D L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT +
Sbjct: 254 GEESVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------R 305
Query: 107 PFLLMKLDLVKNR 119
L M+LDL + R
Sbjct: 306 EELAMRLDLTEAR 318
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 212 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 262
>gi|355757247|gb|EHH60772.1| Aristaless-related homeobox [Macaca fascicularis]
Length = 290
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 147 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 193
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 159 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 209
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 11 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 61
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 51 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 101
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 212 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 262
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 192 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 238
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 270 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 318
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 266 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 316
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 8/59 (13%)
Query: 48 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTS 98
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTS
Sbjct: 193 GDGDVRDGEDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTS 251
>gi|345317707|ref|XP_001510573.2| PREDICTED: homeobox protein ARX-like, partial [Ornithorhynchus
anatinus]
Length = 159
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 108 GLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 157
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 6/59 (10%)
Query: 45 SGRGEEDVSEGEMEDYASLP------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G G++ ++ E + Y P KRKQRRYRTTFTS+QL+ELEKAF RTHYPDVFT
Sbjct: 205 AGGGQDASADNEDDCYGGPPSAGGTNKRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFT 263
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M++DL + R VQ +
Sbjct: 209 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFT--------REELAMRVDLTEAR-VQVW 259
>gi|321473819|gb|EFX84785.1| hypothetical protein DAPPUDRAFT_36325 [Daphnia pulex]
Length = 64
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFT + L MK+ L + R +Q +
Sbjct: 1 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFT--------REELAMKIGLTEAR-IQVW 51
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 391 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 439
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 286 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 334
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 323 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 371
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R VQ +
Sbjct: 103 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR-VQVW 152
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 59 DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D +P+RKQRRYRTTFTS+QL+ELEKAF RTHYPDVFT
Sbjct: 3 DDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFT 41
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 323 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 371
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 327 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 375
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M++DL + R
Sbjct: 181 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFT--------REELAMRVDLTEAR 227
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M+LDL + R
Sbjct: 335 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT--------REELAMRLDLTEAR 383
>gi|6136895|dbj|BAA85852.1| Arx homeodomain protein [Mus musculus]
Length = 562
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 41/57 (71%), Gaps = 9/57 (15%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT L M+LDL + R
Sbjct: 325 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTEE---------LAMRLDLTEAR 372
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + L M++DL + R
Sbjct: 209 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFT--------REELAMRVDLTEAR 255
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 20/109 (18%)
Query: 20 GSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDV-SEGEMED---YASLPKRKQRRYRTTF 75
GS H S +DS + + N G+G +DV S G+ +D S KRK+RR RTTF
Sbjct: 72 GSGIHKSEQDSTNNNAGAN-------GKGNDDVKSPGDPKDDDKNDSDAKRKKRRNRTTF 124
Query: 76 TSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
TS+QLEE+EK F RTHYPDV+ + L ++ DL + R VQ +
Sbjct: 125 TSYQLEEMEKVFQRTHYPDVYC--------REQLALRCDLTEAR-VQVW 164
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 15/94 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF F+ L +++ L + R VQ +
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVF--------FREELALRIQLTEAR-VQVW 141
Query: 125 VAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
+ R K +R+ E + K + L L PS
Sbjct: 142 --FQNRRAK---WRKQEKQCK-VTTHLTSHLPPS 169
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 15/94 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF F+ L +++ L + R VQ +
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVF--------FREELALRIQLTEAR-VQVW 141
Query: 125 VAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
+ R K +R+ E + K + L L PS
Sbjct: 142 --FQNRRAK---WRKQEKQCK-VTTHLTSHLPPS 169
>gi|334329497|ref|XP_003341233.1| PREDICTED: homeobox protein ARX-like [Monodelphis domestica]
Length = 562
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTS 98
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTS
Sbjct: 317 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTS 352
>gi|322800741|gb|EFZ21645.1| hypothetical protein SINV_12341 [Solenopsis invicta]
Length = 247
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKL 113
E E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF F+ L +++
Sbjct: 80 ENEERSSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVF--------FREELAVRI 131
Query: 114 DLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
L + R VQ + + R K +R+ E + K I + L PS
Sbjct: 132 QLTEAR-VQVW--FQNRRAK---WRKQEKQCK-IATHMTSHLPPS 169
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF++FQLEELE+AF +THYPDVFT + L M++DL + R VQ +
Sbjct: 217 KRKQRRYRTTFSAFQLEELERAFQKTHYPDVFT--------REELAMRVDLTEAR-VQVW 267
>gi|307175916|gb|EFN65729.1| Homeobox protein ARX [Camponotus floridanus]
Length = 249
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 14/94 (14%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
SE E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF F+ L ++
Sbjct: 82 SESEERPSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVF--------FREELAVR 133
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKF 146
+ L + R VQ + + R K +R+ E + K
Sbjct: 134 IQLTEAR-VQVW--FQNRRAK---WRKQEKQCKI 161
>gi|307195645|gb|EFN77487.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 271
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKL 113
E E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF F+ L +++
Sbjct: 82 ESEERPSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVF--------FREELAVRI 133
Query: 114 DLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
L + R VQ + + R K +R+ E + K I + L PS
Sbjct: 134 QLTEAR-VQVW--FQNRRAK---WRKQEKQCK-IATHMTSHLPPS 171
>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
castaneum]
gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
Length = 220
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 14/92 (15%)
Query: 58 EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVK 117
+D + KRKQRRYRTTF+++QLEELE+AF +THYPDVF F+ L +++DL +
Sbjct: 36 DDANNASKRKQRRYRTTFSNYQLEELERAFHKTHYPDVF--------FREELALRIDLTE 87
Query: 118 NRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPN 149
R VQ + + R K +R+ E +K N
Sbjct: 88 AR-VQVW--FQNRRAK---WRKQEKSVKNAQN 113
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 15/94 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF F+ L +++ L + R VQ +
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVF--------FREELALRIQLTEAR-VQVW 141
Query: 125 VAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
+ R K +R+ E + K + L + PS
Sbjct: 142 --FQNRRAK---WRKQEKQCK-VTTHLTSHMPPS 169
>gi|312382759|gb|EFR28101.1| hypothetical protein AND_04364 [Anopheles darlingi]
Length = 158
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNSMQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 36 DLNRMGVPSSGRGEED-VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHY 92
+L R G P RG + + EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHY
Sbjct: 19 ELPRCGSPGELRGPGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHY 78
Query: 93 PDVFT 97
PD++T
Sbjct: 79 PDIYT 83
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 14/85 (16%)
Query: 61 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRP 120
++ KRKQRRYRTTFT+FQLEELE+AF +THYPDVF F+ L +++ L + R
Sbjct: 89 GAIGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVF--------FREELALRIQLTEAR- 139
Query: 121 VQTYVAYGTGRKKDLVYRRIEVEIK 145
VQ + + R K +R+ E + K
Sbjct: 140 VQVW--FQNRRAK---WRKQEKQCK 159
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
D G PS G D + KRKQRRYRTTF++FQL+ELEK F RTHYPDV
Sbjct: 95 DCRENGSPSDGTNSPDDNG----------KRKQRRYRTTFSAFQLDELEKVFGRTHYPDV 144
Query: 96 FT 97
FT
Sbjct: 145 FT 146
>gi|157137459|ref|XP_001663998.1| hypothetical protein AaeL_AAEL013809 [Aedes aegypti]
gi|108869695|gb|EAT33920.1| AAEL013809-PA [Aedes aegypti]
Length = 358
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
D G PS G D + KRKQRRYRTTF++FQL+ELEK F RTHYPDV
Sbjct: 86 DCRENGSPSDGTNSPDDNG----------KRKQRRYRTTFSAFQLDELEKVFGRTHYPDV 135
Query: 96 FT 97
FT
Sbjct: 136 FT 137
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
D G PS G D + KRKQRRYRTTF++FQL+ELEK F RTHYPDV
Sbjct: 86 DCRENGSPSDGTNSPDDNG----------KRKQRRYRTTFSAFQLDELEKVFGRTHYPDV 135
Query: 96 FT 97
FT
Sbjct: 136 FT 137
>gi|431895109|gb|ELK04900.1| Aristaless-related homeobox protein [Pteropus alecto]
Length = 264
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 158 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT 190
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 57
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 57
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 57
>gi|332017817|gb|EGI58478.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 248
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 14/93 (15%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKL 113
E E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF F+ L +++
Sbjct: 82 ESEERPSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVF--------FREELAVRI 133
Query: 114 DLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKF 146
L + R VQ + + R K +R+ E + K
Sbjct: 134 QLTEAR-VQVW--FQNRRAK---WRKQEKQCKI 160
>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
Length = 360
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFT
Sbjct: 116 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFT 148
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 10/57 (17%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G PS G D + KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFT
Sbjct: 100 GSPSDGTNSPDENG----------KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFT 146
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFT
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFT 146
>gi|242008553|ref|XP_002425067.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212508732|gb|EEB12329.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 181
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 9/64 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF+++QL+ELE+AF THYPDVF F+ L +++DL + R VQ
Sbjct: 84 KRKQRRYRTTFSNYQLDELERAFRETHYPDVF--------FREELALRIDLTEAR-VQNL 134
Query: 125 VAYG 128
+++G
Sbjct: 135 LSFG 138
>gi|195470310|ref|XP_002087451.1| GE16946 [Drosophila yakuba]
gi|194173552|gb|EDW87163.1| GE16946 [Drosophila yakuba]
Length = 353
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFT
Sbjct: 187 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFT 219
>gi|443683114|gb|ELT87482.1| hypothetical protein CAPTEDRAFT_113148 [Capitella teleta]
Length = 54
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRRYRTTFTS+QLEELEKAF +THYPDVF + L +++DL + R
Sbjct: 2 KRKQRRYRTTFTSYQLEELEKAFQKTHYPDVFC--------REELALRIDLTEAR 48
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTF 75
S+ S+ SAED + ++ + ++G E D + + + LP KRKQRR RTTF
Sbjct: 141 SKGCDTSNESAEDPENGNTNSDTSSNGATGEREADEGDSDCDSEPELPLKRKQRRSRTTF 200
Query: 76 TSFQLEELEKAFSRTHYPDVFT 97
++ QLEELE+ F RTHYPD++T
Sbjct: 201 SADQLEELERCFERTHYPDIYT 222
>gi|449282367|gb|EMC89211.1| Homeobox protein ARX, partial [Columba livia]
Length = 45
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 11 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT 45
>gi|42601333|gb|AAS21360.1| aristaless related homeobox protein [Oikopleura dioica]
Length = 293
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR+RTTF+++QLEELE F RTHYPDVFT + L ++DL + R VQ +
Sbjct: 123 RRKQRRFRTTFSAYQLEELENTFVRTHYPDVFT--------REELAARIDLTEAR-VQVW 173
Query: 125 VAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLT 156
R+ R V++K I N ++F T
Sbjct: 174 FQ---NRRAKWRKREKHVKVKLIRNPNMLFQT 202
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFT
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFT 239
>gi|194758607|ref|XP_001961553.1| GF15026 [Drosophila ananassae]
gi|190615250|gb|EDV30774.1| GF15026 [Drosophila ananassae]
Length = 325
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L +++DL + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIDLTEAR-VQVW 52
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFT
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFT 239
>gi|170033842|ref|XP_001844785.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874862|gb|EDS38245.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 48 GEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE+ GE D S P KRKQRR RTTFT QLEELEKAF RTHYPD++T
Sbjct: 170 GEKGGCRGEDSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYT 223
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFT
Sbjct: 186 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFT 218
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+K+RRYRTTFTSFQL ELEKAF RTHYPDVFT
Sbjct: 80 KKKRRYRTTFTSFQLRELEKAFERTHYPDVFT 111
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 17/75 (22%)
Query: 28 EDSPS-----ELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEE 82
E +PS +LS L+ P SG +E+ KRKQRRYRTTF+++QL+E
Sbjct: 140 ETAPSVSDAQDLSILSEQQSPCSGSPDEN------------GKRKQRRYRTTFSAYQLDE 187
Query: 83 LEKAFSRTHYPDVFT 97
LEK F+RTHYPDVFT
Sbjct: 188 LEKVFARTHYPDVFT 202
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 25 HSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELE 84
HSA PS N G + +D +E E K+K RR RTTFT+FQL ELE
Sbjct: 96 HSANGFPSAPQTPNGNGAAETAEDADDRAEDEKTQVGEDMKKKHRRNRTTFTTFQLHELE 155
Query: 85 KAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIEVE 143
+AF ++HYPDV++ + L MK++L + V+ V + R K +IE +
Sbjct: 156 RAFEKSHYPDVYS--------REELAMKINLPE---VRVQVWFQNRRAKWRRQEKIEAQ 203
>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein VSX-1; AltName: Full=Transcription factor VSX1
gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
Length = 341
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPF 108
++D G+ D + KRK+RR+RT FTS QLEELEKAF HYPDV+ +
Sbjct: 129 DDDCLSGDRNDGKNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYA--------REM 180
Query: 109 LLMKLDLVKNRPVQTYVAY--GTGRKKDLVYRRIEVEIKF 146
L MK +L ++R +Q + RK++ + R V ++
Sbjct: 181 LAMKTELPEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 219
>gi|195035409|ref|XP_001989170.1| GH10195 [Drosophila grimshawi]
gi|193905170|gb|EDW04037.1| GH10195 [Drosophila grimshawi]
Length = 636
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
EED+S+ E E +L KRKQRR RTTF++ QLEELE+AF RT YPD+FT
Sbjct: 186 EEDLSDCESEPGIAL-KRKQRRCRTTFSASQLEELERAFERTQYPDIFT 233
>gi|195066771|ref|XP_001996841.1| GH11036 [Drosophila grimshawi]
gi|193891514|gb|EDV90380.1| GH11036 [Drosophila grimshawi]
Length = 372
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 72/144 (50%), Gaps = 31/144 (21%)
Query: 2 DFLKLTNLILILSEYSRTGSYSHHSAEDSPSELS--------DLNRMGVPSSGRGEEDVS 53
DFL+ L IL E S G +S H A D+ E S D + +G+ SS ++
Sbjct: 70 DFLEELVLDWIL-EISWKGGHSRHVAADAAKESSLGEPELPPDSDTVGMDSSYLSVKEAG 128
Query: 54 EGEMEDYAS--LP-----------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
+D AS LP K K+RR RTTFTS+QLEELEK F +THYPDV+
Sbjct: 129 VKGPQDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--- 185
Query: 101 SIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+ DL + R VQ +
Sbjct: 186 -----REQLAMRTDLTEAR-VQVW 203
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 24 HHSAEDS----PSELSDLNRMG--VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
HHS D P +D G P+ R D S E +A+ K+K+RR RTTFTS
Sbjct: 62 HHSNSDDENRVPLTNADAKPAGPASPNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTS 121
Query: 78 FQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
FQLEE+E+ F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 122 FQLEEMERVFQKTHYPDVY--------MREQLALRADLTEAR-VQVW 159
>gi|195032847|ref|XP_001988573.1| GH11236 [Drosophila grimshawi]
gi|193904573|gb|EDW03440.1| GH11236 [Drosophila grimshawi]
Length = 372
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|82395408|gb|ABB72468.1| NVHD100-paired class homeobox protein [Nematostella vectensis]
gi|110339227|gb|ABG67877.1| ARX, partial [Nematostella vectensis]
Length = 60
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 9/57 (15%)
Query: 68 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
QRRYRTTFTS+QLEELE+AF++THYPDVFT L +K+DL + R VQ +
Sbjct: 1 QRRYRTTFTSYQLEELERAFAKTHYPDVFTREA--------LAVKIDLTEAR-VQVW 48
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 14/86 (16%)
Query: 44 SSGRGEEDVSE--GEMED---YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTS 98
++G+G +DV G+ +D S KRK+RR RTTFTS+QLEE+EK F RTHYPDV+
Sbjct: 89 ANGKGSDDVKSPMGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYC- 147
Query: 99 TGSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L ++ DL + R VQ +
Sbjct: 148 -------REQLALRCDLTEAR-VQVW 165
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 24 HHSAEDS----PSELSDLNRMG--VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
HHS D P +D G P+ R D S E +A+ K+K+RR RTTFTS
Sbjct: 62 HHSNSDDENRVPLTNADAKPTGPASPNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTS 121
Query: 78 FQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
FQLEE+E+ F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 122 FQLEEMERVFQKTHYPDVY--------MREQLALRADLTEAR-VQVW 159
>gi|195437558|ref|XP_002066707.1| GK24418 [Drosophila willistoni]
gi|194162792|gb|EDW77693.1| GK24418 [Drosophila willistoni]
Length = 364
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF F+ L ++++L + R VQ +
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVF--------FREELAVRIELTEAR-VQVW 52
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 11/77 (14%)
Query: 24 HHSAEDSPSELSDLNRMGVPSSGRGEEDV-SEGEMED---YASLPKRKQRRYRTTFTSFQ 79
H + +DS + N G ++G+G +DV S G+ +D S KRK+RR RTTFTS+Q
Sbjct: 159 HKAEQDSTN-----NNAG--ANGKGNDDVKSPGDPKDDDKNDSDAKRKKRRNRTTFTSYQ 211
Query: 80 LEELEKAFSRTHYPDVF 96
LEE+EK F RTHYPDV+
Sbjct: 212 LEEMEKVFQRTHYPDVY 228
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 49 EEDVSEG-EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKP 107
+++ EG E D + KRK+RR RTTFTSFQL+E+EK F RTHYPDV++ +
Sbjct: 85 QDENKEGTEQSDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYS--------RE 136
Query: 108 FLLMKLDLVKNRPVQTY 124
L ++ DL + R VQ +
Sbjct: 137 QLALRCDLTEAR-VQVW 152
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E + E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++T
Sbjct: 183 ECPIKEDELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYT 231
>gi|313224351|emb|CBY20140.1| unnamed protein product [Oikopleura dioica]
Length = 291
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR+RTTF+++QLEELE F RTHYPDVFT + L ++DL + R VQ +
Sbjct: 123 RRKQRRFRTTFSAYQLEELENTFVRTHYPDVFT--------REELAARIDLTEAR-VQVW 173
Query: 125 VAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLT 156
R+ R V++ I N +F T
Sbjct: 174 FQ---NRRAKWRKREKHVKVNIIRNPNTLFQT 202
>gi|67968091|dbj|BAE00526.1| unnamed protein product [Macaca fascicularis]
Length = 246
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 37 LNRMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
+N MG S+ + +E +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD+
Sbjct: 17 VNSMGKASAPQSDEG---SDIDSEPDLPLKRKQRRNRTTFTAEQLEELERAFERTHYPDI 73
Query: 96 FT 97
+T
Sbjct: 74 YT 75
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 24 HHSAEDS----PSELSDLNRMG--VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
HHS D P +D G P+ R D S E +A+ K+K+RR RTTFTS
Sbjct: 62 HHSNSDDENRVPLTNADPKPAGPASPNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTS 121
Query: 78 FQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
FQLEE+E+ F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 122 FQLEEMERVFQKTHYPDVY--------MREQLALRADLTEAR-VQVW 159
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 210 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 258
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 210 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 258
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 50 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFL 109
E G + D A+ KRK+RR RTTFTSFQLEE+EK F +THYPDV+ + L
Sbjct: 89 EGALNGSLGDDANA-KRKKRRNRTTFTSFQLEEMEKVFQKTHYPDVYC--------REQL 139
Query: 110 LMKLDLVKNRPVQTY 124
++ DL + R VQ +
Sbjct: 140 ALRCDLTEAR-VQVW 153
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 196 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 192 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 240
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 196 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 192 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 240
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 209 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQVW 185
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 205 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 253
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 209 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 205 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 253
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 199 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 198 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 205 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 252
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
KRKQRRYRTTFT FQL+ELE+AF +THYPDVF
Sbjct: 47 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVF 78
>gi|301508010|gb|ADK77973.1| aristaless-related homeobox protein [Macropus eugenii]
Length = 552
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 8/57 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
L KRKQRRYRTTFTS+QL ELE+AF +TH PDVFT + L M+LDL + R
Sbjct: 313 LLKRKQRRYRTTFTSYQLLELERAFQKTHCPDVFT--------REELAMRLDLTEAR 361
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 198 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 46 GRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 199 GPGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 251
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 LGDRSPGNRTDDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 260
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 45 SGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G ED S+ + E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 190 AGSTVEDSSDVDSE--PDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 241
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQVW 185
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E+E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 207 EVESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 46 GRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 GPGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 259
>gi|449270500|gb|EMC81167.1| Paired mesoderm homeobox protein 2A, partial [Columba livia]
Length = 178
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 26/93 (27%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ-- 122
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ
Sbjct: 15 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVS 65
Query: 123 ---------------TYVAYGTGRKKDLVYRRI 140
+ VA GTG K D V R+
Sbjct: 66 CRGGTVGALRMEVGLSSVAAGTGSKWDNVPWRV 98
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 512 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 554
>gi|307182442|gb|EFN69677.1| Paired mesoderm homeobox protein 2B [Camponotus floridanus]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 136 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQGW 186
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|440808052|gb|AGC24169.1| Phox2 [Sepia officinalis]
Length = 336
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELEKAF+ THYPD++T + + MK+DL + R VQ +
Sbjct: 129 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYT--------REEIAMKIDLTEAR-VQVW 179
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 195 LGDRSPGNRTDDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 251
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 47 RGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 198 KGNRTDESSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|395512821|ref|XP_003760632.1| PREDICTED: retinal homeobox protein Rx1-like [Sarcophilus
harrisii]
Length = 208
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G P+ GR GE ED PK+K RR RTTFT+FQL +LE+AF R+HYPDV++
Sbjct: 8 GEPAEGRAP---GSGEAED---APKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYS 58
>gi|328788663|ref|XP_001120833.2| PREDICTED: paired mesoderm homeobox protein 2B [Apis mellifera]
Length = 196
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 181
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 51 DVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 198 DDGASDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 48 GEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G++ E+ D S P KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 191 GDKGSRMNEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 335 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 377
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++T
Sbjct: 144 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYT 195
>gi|194224085|ref|XP_001491024.2| PREDICTED: acyl-CoA synthetase short-chain family member 1 [Equus
caballus]
Length = 967
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 42/77 (54%), Gaps = 21/77 (27%)
Query: 21 SYSHHSAEDSPSE-LSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQ 79
S HH+ EDSPSE S+L PS +RK+RR+ T FT+ Q
Sbjct: 3 SAEHHTYEDSPSEDRSELKASPTPS--------------------RRKRRRHSTVFTAHQ 42
Query: 80 LEELEKAFSRTHYPDVF 96
LEELEKAFS HYPDV+
Sbjct: 43 LEELEKAFSEAHYPDVY 59
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
KRKQRRYRTTFT FQL+ELE+AF +THYPDVF
Sbjct: 18 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVF 49
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++T
Sbjct: 144 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYT 195
>gi|295321888|pdb|3LNQ|A Chain A, Structure Of Aristaless Homeodomain In Complex With Dna
Length = 58
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 9/55 (16%)
Query: 70 RYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RYRTTFTSFQLEELEKAFSRTHYPDVFT + L MK+ L + R +Q +
Sbjct: 1 RYRTTFTSFQLEELEKAFSRTHYPDVFT--------REELAMKIGLTEAR-IQVW 46
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 57/106 (53%), Gaps = 21/106 (19%)
Query: 24 HHSAEDSPSELSDLNRMGVPSSGRGEEDVSE-----GEMEDYASLPKRKQRRYRTTFTSF 78
H S +DS + + N G+G +DV + + S KRK+RR RTTFTS+
Sbjct: 55 HKSEQDSTNNNAGAN-------GKGNDDVKSPMGDSKDDDKNDSDAKRKKRRNRTTFTSY 107
Query: 79 QLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
QLEE+EK F RTHYPDV+ + L ++ DL + R VQ +
Sbjct: 108 QLEEMEKVFQRTHYPDVYC--------REQLALRCDLTEAR-VQVW 144
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 203 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++T
Sbjct: 168 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYT 219
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 217 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 259
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 31/34 (91%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PKRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 218 PKRKQRRSRTTFTADQLEELERAFERTHYPDIYT 251
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR RTTFTSFQLEE+EK F RTHYPDV+ + L ++ DL + R VQ +
Sbjct: 107 KRKKRRNRTTFTSFQLEEMEKVFQRTHYPDVY--------MREQLALRCDLTEAR-VQVW 157
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 3 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 45
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 49 EEDVSEG-EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKP 107
+++ EG E D + KRK+RR RTTFTSFQL+E+EK F RTHYPDV++ +
Sbjct: 85 QDENKEGTEQSDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYS--------RE 136
Query: 108 FLLMKLDLVKNRPVQTY 124
L ++ DL + R VQ +
Sbjct: 137 QLALRCDLTEAR-VQVW 152
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 206 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 248
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 220 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 262
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 203 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 196 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 238
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 186 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 228
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 203 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 245
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 327 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 369
>gi|431915726|gb|ELK16059.1| Homeobox protein aristaless-like 4 [Pteropus alecto]
Length = 195
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 9/67 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ
Sbjct: 126 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVS 176
Query: 125 VAYGTGR 131
G GR
Sbjct: 177 GVSGVGR 183
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|340375161|ref|XP_003386105.1| PREDICTED: hypothetical protein LOC100637124 [Amphimedon
queenslandica]
Length = 332
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 59/121 (48%), Gaps = 28/121 (23%)
Query: 4 LKLTNLILILSEYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASL 63
L T+L + + S G Y HH + VPSS +S G E Y
Sbjct: 87 LNSTSLATVHAPNSHAGMYLHHPSAGP----------MVPSS------MSIGRSEPYR-- 128
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
K KQRR+RT FTS QLEELEKAF +T YPDVF + L MK+ L + R VQ
Sbjct: 129 -KGKQRRHRTNFTSHQLEELEKAFEKTRYPDVF--------MREELAMKISLTEAR-VQV 178
Query: 124 Y 124
+
Sbjct: 179 W 179
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 220 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 262
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|332027511|gb|EGI67588.1| Paired mesoderm homeobox protein 2B [Acromyrmex echinatior]
Length = 212
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 137 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 183
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 206 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 248
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
SE E D S P KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 214 SEDEESDCDSEPGLSVKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 262
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 177 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 219
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 214 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 256
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 200 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 242
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 246
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
Length = 510
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 210 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 252
>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
Length = 850
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 219 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 261
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 221 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 263
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 136 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 178
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 185 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 227
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 24/110 (21%)
Query: 33 ELSDLNRMG-VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
+L DL G P+ G EED +PK+K RR RTTFT++QL ELE+AF R+H
Sbjct: 9 DLCDLREDGSTPTRGTPEED---------NEIPKKKHRRNRTTFTTYQLHELERAFERSH 59
Query: 92 YPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
YPDV++ + L MK+ L + V+ V + R K +RR E
Sbjct: 60 YPDVYS--------REELAMKVSLPE---VRVQVWFQNRRAK---WRRQE 95
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|326674430|ref|XP_001919624.3| PREDICTED: paired box protein Pax-3 [Danio rerio]
Length = 653
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E+E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 212 EVESEPDLPLKRKQRRSRTTFTADQLEELERAFERTHYPDIYT 254
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 197 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 239
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 205 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 247
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 257
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 336 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 378
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris
gallopavo]
Length = 330
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 8 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 50
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 191 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 233
>gi|345314187|ref|XP_003429473.1| PREDICTED: paired box protein Pax-7-like, partial
[Ornithorhynchus anatinus]
Length = 84
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 9 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 51
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 8 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 50
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 24/110 (21%)
Query: 33 ELSDLNRMG-VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
+L DL G P+ G EED +PK+K RR RTTFT++QL ELE+AF R+H
Sbjct: 9 DLCDLREDGSTPTRGTPEED---------NEIPKKKHRRNRTTFTTYQLHELERAFERSH 59
Query: 92 YPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
YPDV++ + L MK+ L + V+ V + R K +RR E
Sbjct: 60 YPDVYS--------REELAMKVSLPE---VRVQVWFQNRRAK---WRRQE 95
>gi|157129916|ref|XP_001661815.1| paired box protein, putative [Aedes aegypti]
gi|108872028|gb|EAT36253.1| AAEL011647-PA [Aedes aegypti]
Length = 283
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 21 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQVW 71
>gi|444515967|gb|ELV11025.1| Homeobox protein unc-4 like protein [Tupaia chinensis]
Length = 302
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAFS +HYPDVF + L ++LDLV++R VQ
Sbjct: 13 PGCKRRRTRTNFTGWQLEELEKAFSESHYPDVF--------MREALALRLDLVESR-VQV 63
Query: 124 Y 124
+
Sbjct: 64 W 64
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 714 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 767
>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
Length = 280
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 249
>gi|312118188|ref|XP_003151537.1| homeobox protein [Loa loa]
Length = 113
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
+ +RKQRR RTTFTS QL+ELE+AF THYPD++T + L M++DL + R VQ
Sbjct: 1 MERRKQRRIRTTFTSAQLKELERAFLETHYPDIYT--------REDLAMRIDLTEAR-VQ 51
Query: 123 TYVAYGTGR-KKDLVYRRIEVEIK 145
+ + +K RR++ EI+
Sbjct: 52 VWFQNRRAKFRKQEKMRRMKEEIR 75
>gi|281333979|gb|ADA61179.1| paired box 7 [Meleagris gallopavo]
Length = 520
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|322797345|gb|EFZ19457.1| hypothetical protein SINV_02900 [Solenopsis invicta]
Length = 185
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 137 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 183
>gi|393897730|gb|EFO12532.2| homeobox protein [Loa loa]
Length = 116
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
+ +RKQRR RTTFTS QL+ELE+AF THYPD++T + L M++DL + R VQ
Sbjct: 1 MERRKQRRIRTTFTSAQLKELERAFLETHYPDIYT--------REDLAMRIDLTEAR-VQ 51
Query: 123 TYVAYGTGR-KKDLVYRRIEVEIK 145
+ + +K RR++ EI+
Sbjct: 52 VWFQNRRAKFRKQEKMRRMKEEIR 75
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 40 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQVW 90
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 196 LGDKSPGSRTDDGSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 252
>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
Length = 275
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|242019572|ref|XP_002430234.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
gi|212515334|gb|EEB17496.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
Length = 168
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R VQ +
Sbjct: 24 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR-VQVW 74
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++T
Sbjct: 223 EEELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYT 266
>gi|307205017|gb|EFN83540.1| Paired mesoderm homeobox protein 2B [Harpegnathos saltator]
Length = 223
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 142 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 188
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 208 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 250
>gi|350418342|ref|XP_003491830.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Bombus
impatiens]
Length = 200
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 181
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 203 LGDKSPGSRTDDGSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 259
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 50 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
ED S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 193 EDSSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 239
>gi|380018965|ref|XP_003693389.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Apis florea]
Length = 187
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 181
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 50 EDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E G+ D S P KRKQRR RTTFT QLEELEKAF RTHYPD++T
Sbjct: 167 EKNGPGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYT 218
>gi|56694804|gb|AAW23064.1| Arx [Oikopleura dioica]
Length = 277
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 9/66 (13%)
Query: 59 DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKN 118
+ A+ +RKQRR+RTTF+++QLEELE F RTHYPDVFT + L ++DL +
Sbjct: 117 ESAAESRRKQRRFRTTFSAYQLEELENTFVRTHYPDVFT--------REELAARIDLTEA 168
Query: 119 RPVQTY 124
R VQ +
Sbjct: 169 R-VQVW 173
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 50 EDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E G+ D S P KRKQRR RTTFT QLEELEKAF RTHYPD++T
Sbjct: 167 EKNGPGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYT 218
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 44 SSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
++G+G +D G++ + + K K+RR RTTFTS+QLEELEK F +THYPDV+
Sbjct: 99 TAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--- 155
Query: 101 SIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+ DL + R VQ +
Sbjct: 156 -----REQLAMRTDLTEAR-VQVW 173
>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
Length = 835
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
Length = 836
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
Query: 56 EMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E D+ S P KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 244 EGSDFESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 289
>gi|122892559|gb|ABM67330.1| PAX7 [Hylobates klossii]
Length = 111
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 53 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 95
>gi|429836904|dbj|BAM72542.1| paired box 3, partial [Pipistrellus abramus]
Length = 403
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 134 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 187
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 157 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 189
>gi|291230020|ref|XP_002734968.1| PREDICTED: Unc4.1 homeobox-like [Saccoglossus kowalevskii]
Length = 442
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+RR RT F +QLEELEKAF+ +HYPDVFT + L MKLDLV++R VQ +
Sbjct: 96 KRRRTRTNFNGWQLEELEKAFNDSHYPDVFT--------REALAMKLDLVESR-VQVW 144
>gi|56714085|gb|AAW24013.1| homeodomain protein Pax37a, partial [Oikopleura dioica]
Length = 440
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++T
Sbjct: 176 EDELDESVRPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYT 219
>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
Length = 250
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 4/55 (7%)
Query: 47 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G D+ G D S P K+KQRR+RTTFT+ Q++ELEKAF RT YPDV+T
Sbjct: 159 KGHNDMDAGTGSDCDSEPGLSLKQKQRRHRTTFTAQQMDELEKAFDRTQYPDVYT 213
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 218 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 250
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella teleta]
Length = 116
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 10/69 (14%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
E++D A +RKQRR RTTFT QLEELEKAF++THYPDVFT + L M+++L
Sbjct: 39 ELQDDA-FARRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFT--------REELAMRINL 89
Query: 116 VKNRPVQTY 124
+ R VQ +
Sbjct: 90 TEAR-VQVW 97
>gi|440808050|gb|AGC24168.1| Phox2 [Aplysia californica]
Length = 329
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELEKAF+ THYPD++T + + MK DL + R VQ +
Sbjct: 132 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYT--------REEIAMKTDLTEAR-VQVW 182
>gi|73989846|ref|XP_850138.1| PREDICTED: visual system homeobox 1 [Canis lupus familiaris]
Length = 363
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 34/102 (33%)
Query: 26 SAEDSPSELSDLNRMGV---PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEE 82
S EDSPSE +R G+ PSSG KRK+RR+RT FT+ QLEE
Sbjct: 140 SDEDSPSE----DRSGLKASPSSG------------------KRKKRRHRTVFTAHQLEE 177
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LEKAFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 178 LEKAFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 210
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Query: 44 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIA 103
S G + S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 107 SPGLSTSNNSDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS------ 160
Query: 104 VFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
+ L MK++L + V+ V + R K ++EV
Sbjct: 161 --REELAMKVNLPE---VRVQVWFQNRRAKWRRQEKLEV 194
>gi|440808048|gb|AGC24167.1| Phox2 [Lymnaea stagnalis]
Length = 343
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELEKAF+ THYPD++T + + MK DL + R VQ +
Sbjct: 134 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYT--------REEIAMKTDLTEAR-VQVW 184
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
Query: 57 MEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 169 VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 210
>gi|410972832|ref|XP_003992860.1| PREDICTED: paired mesoderm homeobox protein 2A, partial [Felis
catus]
Length = 273
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 34 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 93
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 94 LERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 126
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 221 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 253
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 226 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 258
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 212 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 212 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|18859553|ref|NP_571408.1| visual system homeobox 1 [Danio rerio]
gi|25009566|sp|O42250.2|VSX1_DANRE RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor VSX1
gi|7159413|gb|AAB71611.2| paired-like homeobox protein [Danio rerio]
Length = 344
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF+ HYPDV+ + L MK +L ++R +Q +
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYA--------REMLAMKTELPEDR-IQVW 198
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 199 FQNRRAKWRKREKCWGRSSVMAEY 222
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 8 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 50
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|73988195|ref|XP_542326.2| PREDICTED: paired mesoderm homeobox protein 2A [Canis lupus
familiaris]
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|335294428|ref|XP_003357226.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Sus scrofa]
Length = 286
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|149719311|ref|XP_001499207.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Equus
caballus]
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 75 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 117
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 215 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 247
>gi|86355079|dbj|BAE78774.1| paired box containing Pax3 [Pelodiscus sinensis]
Length = 418
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 129 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 182
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|37748754|gb|AAH59574.1| Vsx1 protein [Danio rerio]
Length = 340
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF+ HYPDV+ + L MK +L ++R +Q +
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYA--------REMLAMKTELPEDR-IQVW 198
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 199 FQNRRAKWRKREKCWGRSSVMAEY 222
>gi|2583019|gb|AAB82744.1| ARIX homeodomain protein [Homo sapiens]
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYNFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|431898078|gb|ELK06781.1| Paired mesoderm homeobox protein 2A [Pteropus alecto]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|395814903|ref|XP_003780977.1| PREDICTED: paired mesoderm homeobox protein 2A [Otolemur garnettii]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
Length = 613
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 35 SDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 94
SD++ G ++ +ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD
Sbjct: 182 SDVSGGGHHNNKPSDEDISDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPD 240
Query: 95 VFT 97
++T
Sbjct: 241 IYT 243
>gi|426369665|ref|XP_004051805.1| PREDICTED: paired mesoderm homeobox protein 2A [Gorilla gorilla
gorilla]
Length = 342
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 104 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 163
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 164 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 195
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 212 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 244
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ
Sbjct: 94 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVQ 144
Query: 125 VAYGTGRKK 133
V + R K
Sbjct: 145 VWFQNRRAK 153
>gi|402894541|ref|XP_003910413.1| PREDICTED: paired mesoderm homeobox protein 2A [Papio anubis]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 253 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 285
>gi|46249382|ref|NP_005160.2| paired mesoderm homeobox protein 2A [Homo sapiens]
gi|297689630|ref|XP_002822248.1| PREDICTED: paired mesoderm homeobox protein 2A [Pongo abelii]
gi|77416873|sp|O14813.2|PHX2A_HUMAN RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|27371330|gb|AAH41564.1| Paired-like homeobox 2a [Homo sapiens]
gi|119595262|gb|EAW74856.1| paired-like (aristaless) homeobox 2a [Homo sapiens]
gi|158254722|dbj|BAF83334.1| unnamed protein product [Homo sapiens]
gi|167773113|gb|ABZ91991.1| paired-like homeobox 2a [synthetic construct]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S PKRK+RR RTTFT++QLEE+E+ F +THYPDV+T
Sbjct: 8 SAPKRKKRRNRTTFTAYQLEEMERVFQKTHYPDVYT 43
>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
Length = 525
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 193 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 246
>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
Length = 319
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 165 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 218
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 42 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 95
>gi|328802691|ref|NP_001179086.1| paired mesoderm homeobox protein 2A [Bos taurus]
gi|296479851|tpg|DAA21966.1| TPA: paired-like homeobox 2a-like [Bos taurus]
Length = 284
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 106 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|148684574|gb|EDL16521.1| paired-like homeobox 2a [Mus musculus]
Length = 263
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 28 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 87
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 88 LERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 120
>gi|62183710|gb|AAX73253.1| Uncx4.1 [Danio rerio]
Length = 470
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 97 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 147
Query: 124 Y 124
+
Sbjct: 148 W 148
>gi|53791211|dbj|BAD54702.1| transcription factor [Rattus norvegicus]
Length = 281
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|325980252|gb|ADZ48385.1| Pax3 [Polyodon spathula]
Length = 285
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 111 DIESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 153
>gi|440907876|gb|ELR57965.1| Paired mesoderm homeobox protein 2A, partial [Bos grunniens mutus]
Length = 155
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 47 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 106
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 107 ERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 138
>gi|119591196|gb|EAW70790.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_b [Homo
sapiens]
Length = 330
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 46 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 99
>gi|27807477|ref|NP_777192.1| visual system homeobox 1 [Bos taurus]
gi|25009569|sp|Q9GMA3.1|VSX1_BOVIN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802261|gb|AAF99655.1|AF251032_1 homeodomain protein RINX [Bos taurus]
gi|296481350|tpg|DAA23465.1| TPA: visual system homeobox 1 [Bos taurus]
Length = 365
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L MK +L ++R +Q +
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAMKTELPEDR-IQVW 211
>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|444512202|gb|ELV10061.1| Paired box protein Pax-3 [Tupaia chinensis]
Length = 458
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 169 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 222
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 186 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 236
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 9/70 (12%)
Query: 29 DSPSELSDLNRMG-VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAF 87
D +L DL G P+ G E + +E LPK+K RR RTTFT++QL ELE+AF
Sbjct: 4 DKCEDLCDLREDGSTPTPGTPEGEDNE--------LPKKKHRRNRTTFTTYQLHELERAF 55
Query: 88 SRTHYPDVFT 97
R+HYPDV++
Sbjct: 56 ERSHYPDVYS 65
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|149068721|gb|EDM18273.1| paired-like homeobox 2a [Rattus norvegicus]
Length = 281
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|6679399|ref|NP_032913.1| paired mesoderm homeobox protein 2A [Mus musculus]
gi|6093752|sp|Q62066.1|PHX2A_MOUSE RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=Aristaless homeobox protein homolog; AltName:
Full=PHOX2A homeodomain protein; AltName:
Full=Paired-like homeobox 2A
gi|402642|emb|CAA52923.1| Phox2 homeodomain protein [Mus musculus]
gi|225000420|gb|AAI72722.1| Paired-like homeobox 2a [synthetic construct]
gi|225000566|gb|AAI72615.1| Paired-like homeobox 2a [synthetic construct]
Length = 280
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 137
>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
Length = 529
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 240 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 293
>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
Length = 505
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 65/125 (52%), Gaps = 18/125 (14%)
Query: 8 NLILILSEYSRTGSYSHHS-AEDSPSELSDLNRMGVPSSG-RGEED------VSEGEMED 59
N L +S Y + GS A +S D N +GV +G +G +D S E D
Sbjct: 154 NGPLQVSCYGKEGSLGETEIAPNSDPVGMDSNYLGVKEAGVKGSQDRAGTDLPSPMEKAD 213
Query: 60 YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 214 SESN-KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 264
Query: 120 PVQTY 124
VQ +
Sbjct: 265 -VQVW 268
>gi|224080279|ref|XP_002189321.1| PREDICTED: paired box protein Pax-7-like, partial [Taeniopygia
guttata]
gi|327292272|ref|XP_003230844.1| PREDICTED: paired box protein Pax-7-like, partial [Anolis
carolinensis]
gi|120974931|gb|ABM46764.1| PAX7 [Gorilla gorilla]
gi|121484047|gb|ABM54349.1| PAX7 [Pan paniscus]
gi|339791146|gb|AEK12234.1| transcription factor pax7 [Bos taurus]
gi|339791148|gb|AEK12235.1| transcription factor pax7 [Bos taurus]
Length = 66
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 52 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 3 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 50
>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
sapiens]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|432904372|ref|XP_004077298.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 321
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R +Q +
Sbjct: 117 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYA--------REMLAMKTELPEDR-IQVW 167
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 168 FQNRRAKWRKREKCWGRSSVMAEY 191
>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 625
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 29 DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAF 87
+S + L NR SSG +V + E LP KRKQRR RTTF++ QL+ELE+ F
Sbjct: 151 ESSARLDPGNRSS--SSGGEPNEVGGSDSESEPDLPLKRKQRRSRTTFSAEQLDELERCF 208
Query: 88 SRTHYPDVFT 97
RTHYPD++T
Sbjct: 209 ERTHYPDIYT 218
>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
Length = 488
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 199 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 252
>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|449273455|gb|EMC82949.1| Paired mesoderm homeobox protein 2B [Columba livia]
Length = 149
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 28/105 (26%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYG 128
E+ F+ THYPD++T + L +K+DL + R VQ G
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVCAGCG 149
>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
Length = 484
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
Length = 481
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 14/80 (17%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
S +RKQRR RTTFT QLEELE AF++THYPDVFT L MK++L + R V
Sbjct: 43 SFARRKQRRNRTTFTLQQLEELENAFAKTHYPDVFTRED--------LAMKINLTEAR-V 93
Query: 122 QTYVAYGTGRKKDLVYRRIE 141
Q + + R K +R++E
Sbjct: 94 QVW--FQNRRAK---WRKME 108
>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
Length = 484
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
Length = 505
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
Length = 484
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
Length = 479
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
Length = 479
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
Length = 473
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 61 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRP 120
A+ KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R
Sbjct: 150 ANSQKRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYA--------REMLAMKTELPEDR- 200
Query: 121 VQTYVAY--GTGRKKDLVYRRIEVEIKF 146
+Q + RK++ + R V ++
Sbjct: 201 IQVWFQNRRAKWRKREKCWGRSSVMAEY 228
>gi|402591778|gb|EJW85707.1| hypothetical protein WUBG_03381 [Wuchereria bancrofti]
Length = 143
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 9/62 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
+ +RKQRR RTTFTS QL+ELE+AF THYPD++T + L M++DL + R VQ
Sbjct: 28 MERRKQRRIRTTFTSGQLKELERAFLETHYPDIYT--------REDLAMRIDLTEAR-VQ 78
Query: 123 TY 124
+
Sbjct: 79 VW 80
>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
Length = 473
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|311250806|ref|XP_003124306.1| PREDICTED: homeobox protein unc-4 homolog [Sus scrofa]
Length = 398
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 106 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 156
Query: 124 Y 124
+
Sbjct: 157 W 157
>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
Length = 484
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
gorilla]
gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
sapiens]
gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
Length = 484
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELEKAF++THYPDVFT + L M+++L + R VQ +
Sbjct: 95 RRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFT--------REDLAMRINLTEAR-VQVW 145
>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
Length = 509
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 224 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 277
>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
abelii]
gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
sapiens]
Length = 505
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
Length = 403
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|397489578|ref|XP_003815802.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2A
[Pan paniscus]
Length = 221
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 26/101 (25%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEEL 83
G P G + + G + D+ P KRKQRR RTTFTS QL+EL
Sbjct: 39 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 98
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 99 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 130
>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
carolinensis]
Length = 484
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
Full=Paired-domain transcription factor Pax3-B
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 192 RERAPASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 170 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 223
>gi|16758738|ref|NP_446321.1| paired mesoderm homeobox protein 2A [Rattus norvegicus]
gi|8134639|sp|Q62782.1|PHX2A_RAT RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|1002494|gb|AAB04168.1| Arix1 homeodomain protein [Rattus norvegicus]
Length = 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 105 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 137
>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 168 RERAPASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 224
>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|219660952|gb|ACL30968.1| visual system homeobox [Carassius auratus]
gi|229424351|gb|ACQ63564.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R +Q +
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYA--------REMLAMKTELPEDR-IQVW 198
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 199 FQNRRAKWRKREKCWGRSSVMAEY 222
>gi|281340522|gb|EFB16106.1| hypothetical protein PANDA_016951 [Ailuropoda melanoleuca]
Length = 172
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 32 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 91
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 92 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 124
>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
laevis]
Length = 461
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 170 RERAPASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 226
>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
aries]
Length = 489
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 200 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 253
>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 190 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 243
>gi|410917898|ref|XP_003972423.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 512
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 98 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 148
Query: 124 Y 124
+
Sbjct: 149 W 149
>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 20 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 70
>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
sapiens]
Length = 407
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|348540080|ref|XP_003457516.1| PREDICTED: visual system homeobox 1-like [Oreochromis niloticus]
Length = 306
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R +Q +
Sbjct: 96 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYA--------REMLAMKTELPEDR-IQVW 146
Query: 125 VA--YGTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 147 FQNRRAKWRKREKCWGRSSVMAEY 170
>gi|295855150|gb|ADG46024.1| Vsx1 A2 [Carassius auratus]
gi|316936358|gb|ADU60208.1| vsx1A2 [Carassius auratus]
Length = 340
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R +Q +
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYA--------REMLAMKTELPEDR-IQVW 198
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 199 FQNRRAKWRKREKCWGRSSVMAEY 222
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 207 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 194 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 247
>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
Length = 479
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
Length = 506
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 183 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 236
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 9/82 (10%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
P + R E G+ A+ K+K+RR RTTFTSFQLEE+E+ F +THYPDV+
Sbjct: 94 PGADRTEGGDQAGKEAPPAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVY------ 147
Query: 103 AVFKPFLLMKLDLVKNRPVQTY 124
+ L ++ DL + R VQ +
Sbjct: 148 --MREQLALRADLTEAR-VQVW 166
>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
Length = 407
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 207 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|410927106|ref|XP_003977007.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
rubripes]
Length = 66
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
Query: 55 GEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E+ D S P KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 4 DEVSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 50
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 169 RERAPASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 225
>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
Length = 619
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+E+VS+ E E +L KRKQRR RTTF++ QLEELE+AF RT YPD+FT
Sbjct: 192 DEEVSDCESEPGIAL-KRKQRRCRTTFSAAQLEELERAFERTQYPDIFT 239
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 49 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 99
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 42 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 173 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 226
>gi|391332291|ref|XP_003740569.1| PREDICTED: uncharacterized protein LOC100905961 [Metaseiulus
occidentalis]
Length = 302
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL ELE+AF THYPD++T + + MK DL + R VQ +
Sbjct: 137 KRKQRRIRTTFTSAQLRELERAFQETHYPDIYT--------REEIAMKTDLTEAR-VQVW 187
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D S G + + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++
Sbjct: 128 DDSMGNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYS 174
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 174 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 206
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 122 KRKQRRSRTTFTAEQLEELERAFGRTHYPDIYT 154
>gi|395857545|ref|XP_003801152.1| PREDICTED: visual system homeobox 1 [Otolemur garnettii]
Length = 365
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 11/75 (14%)
Query: 50 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFL 109
EDVS ++ +L KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L
Sbjct: 148 EDVSG--LKASPTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REML 197
Query: 110 LMKLDLVKNRPVQTY 124
+K +L ++R +Q +
Sbjct: 198 AVKTELPEDR-IQVW 211
>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
Length = 612
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFT 76
S +GS + + S S SD++ + +ED+S+ E E +L KRKQRR RTTF+
Sbjct: 163 SASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIAL-KRKQRRCRTTFS 221
Query: 77 SFQLEELEKAFSRTHYPDVFT 97
+ QL+ELE+AF RT YPD++T
Sbjct: 222 ASQLDELERAFERTQYPDIYT 242
>gi|301618086|ref|XP_002938457.1| PREDICTED: homeobox protein unc-4 homolog [Xenopus (Silurana)
tropicalis]
Length = 483
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 97 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 147
Query: 124 Y 124
+
Sbjct: 148 W 148
>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
Length = 268
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 192 RERAPASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 214 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 246
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 44 SSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
++G+G +D G++ + + K K+RR RTTFTS+QLEELEK F +THYPDV+
Sbjct: 159 TAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--- 215
Query: 101 SIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+ DL + R VQ +
Sbjct: 216 -----REQLAMRTDLTEAR-VQVW 233
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT+ QLEELE AF RTHYPDVFT L +K++L + R VQ +
Sbjct: 53 RRKQRRNRTTFTAQQLEELESAFGRTHYPDVFTRED--------LAVKINLTEAR-VQVW 103
>gi|24762822|ref|NP_523862.1| gooseberry-neuro [Drosophila melanogaster]
gi|27923971|sp|P09083.2|GSBN_DROME RecName: Full=Protein gooseberry-neuro; AltName: Full=BSH4;
AltName: Full=Protein gooseberry proximal
gi|7291896|gb|AAF47314.1| gooseberry-neuro [Drosophila melanogaster]
gi|17946362|gb|AAL49215.1| RE64348p [Drosophila melanogaster]
gi|220945952|gb|ACL85519.1| gsb-n-PA [synthetic construct]
gi|220952700|gb|ACL88893.1| gsb-n-PA [synthetic construct]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
Length = 613
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFT 76
S +GS + + S S SD++ + +ED+S+ E E +L KRKQRR RTTF+
Sbjct: 163 SASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIAL-KRKQRRCRTTFS 221
Query: 77 SFQLEELEKAFSRTHYPDVFT 97
+ QL+ELE+AF RT YPD++T
Sbjct: 222 ASQLDELERAFERTQYPDIYT 242
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 45 SGRGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S RG E D S P KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 169 SERGPVTPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 225
>gi|391347837|ref|XP_003748160.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Metaseiulus occidentalis]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRRYRTTF++ QL+ELEKAFS +HYPDVFT + L +K DL + R VQ +
Sbjct: 22 RRKQRRYRTTFSAQQLDELEKAFSVSHYPDVFT--------REELAVKTDLTEAR-VQVW 72
Query: 125 VAYGTGRKKDLVYRRIE 141
+ R K R+E
Sbjct: 73 --FQNRRAKWRKQERVE 87
>gi|147905324|ref|NP_001088286.1| paired-like homeobox 2b [Xenopus laevis]
gi|54038154|gb|AAH84305.1| LOC495120 protein [Xenopus laevis]
Length = 293
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|395856676|ref|XP_003800747.1| PREDICTED: uncharacterized protein LOC100945104 isoform 2 [Otolemur
garnettii]
Length = 281
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQLQ 145
Query: 125 VAYGTGRKK 133
V + R K
Sbjct: 146 VWFQNRRAK 154
>gi|2190464|emb|CAB09537.1| Uncx4.1 [Mus musculus]
Length = 387
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 155
Query: 124 Y 124
+
Sbjct: 156 W 156
>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
carolinensis]
Length = 485
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 45 SGRGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S RG E D S P KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 193 SERGPVTPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|301783553|ref|XP_002927192.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Ailuropoda
melanoleuca]
Length = 179
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 30 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 89
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 90 LERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 122
>gi|172355888|ref|NP_001116492.1| paired-like homeobox 2b [Xenopus (Silurana) tropicalis]
gi|171846498|gb|AAI61760.1| phox2b protein [Xenopus (Silurana) tropicalis]
Length = 293
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|47203313|emb|CAF94225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Query: 63 LP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 16 LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 51
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 217 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
Length = 221
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 62 SLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 169 GLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 205
>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 546
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 219 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 251
>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
Length = 614
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFT 76
S +GS + + S S SD++ + +ED+S+ E E +L KRKQRR RTTF+
Sbjct: 163 SASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIAL-KRKQRRCRTTFS 221
Query: 77 SFQLEELEKAFSRTHYPDVFT 97
+ QL+ELE+AF RT YPD++T
Sbjct: 222 ASQLDELERAFERTQYPDIYT 242
>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
Length = 613
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFT 76
S +GS + + S S SD++ + +ED+S+ E E +L KRKQRR RTTF+
Sbjct: 163 SASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIAL-KRKQRRCRTTFS 221
Query: 77 SFQLEELEKAFSRTHYPDVFT 97
+ QL+ELE+AF RT YPD++T
Sbjct: 222 ASQLDELERAFERTQYPDIYT 242
>gi|339252892|ref|XP_003371669.1| ALX homeobox protein 1 [Trichinella spiralis]
gi|316968043|gb|EFV52386.1| ALX homeobox protein 1 [Trichinella spiralis]
Length = 325
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 14/88 (15%)
Query: 53 SEGE---MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFL 109
SEGE M ++ K+RR RT FTS+QLE+LE AF +HYPDVF + L
Sbjct: 104 SEGENAEMNKSTNISNAKRRRTRTNFTSWQLEQLESAFETSHYPDVF--------MREAL 155
Query: 110 LMKLDLVKNRPVQTYVAY--GTGRKKDL 135
++LDLV++R VQ + RKK++
Sbjct: 156 ALRLDLVESR-VQVWFQNRRAKWRKKEM 182
>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
Length = 447
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E VS+ + E L KRKQRR RTTFT+ QL+ELEKAF RT YPD++T
Sbjct: 158 NEGVSDCDSEPGIPL-KRKQRRSRTTFTAHQLDELEKAFERTQYPDIYT 205
>gi|195489906|ref|XP_002092936.1| GE11387 [Drosophila yakuba]
gi|194179037|gb|EDW92648.1| GE11387 [Drosophila yakuba]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|195353358|ref|XP_002043172.1| GM11765 [Drosophila sechellia]
gi|195586619|ref|XP_002083071.1| GD24898 [Drosophila simulans]
gi|194127260|gb|EDW49303.1| GM11765 [Drosophila sechellia]
gi|194195080|gb|EDX08656.1| GD24898 [Drosophila simulans]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 193 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 225
>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
Full=Paired-domain transcription factor Pax3-A
gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
Length = 484
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 217 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|147904024|ref|NP_001084383.1| paired-like homeobox 2b [Xenopus laevis]
gi|38425329|gb|AAR19766.1| homeodomain protein [Xenopus laevis]
Length = 293
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|49523081|gb|AAH75577.1| paired box 3 [Xenopus (Silurana) tropicalis]
Length = 254
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 42 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 196 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 249
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 173 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 223
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 30 SPSELSDLNRMGVPSSGRGEEDVSEGEMEDYAS------LP-KRKQRRYRTTFTSFQLEE 82
S S +S L R E+ VS+G+ D + +P KRKQRR RTTFT+ QL+E
Sbjct: 148 SISAISRLLRGHDGDDSASEKKVSDGKTSDGSDCDSEPGIPLKRKQRRSRTTFTALQLDE 207
Query: 83 LEKAFSRTHYPDVFT 97
LEKAF RT YPD++T
Sbjct: 208 LEKAFERTQYPDIYT 222
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 193 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 225
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 50 EDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E G+ D S P KRKQRR RTTFT QL+ELEKAF RTHYPD++T
Sbjct: 74 EKNGPGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLDELEKAFERTHYPDIYT 125
>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
Length = 590
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 17 SRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFT 76
S +GS + + S S SD++ + +ED+S+ E E +L KRKQRR RTTF+
Sbjct: 140 SASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIAL-KRKQRRCRTTFS 198
Query: 77 SFQLEELEKAFSRTHYPDVFT 97
+ QL+ELE+AF RT YPD++T
Sbjct: 199 ASQLDELERAFERTQYPDIYT 219
>gi|403306599|ref|XP_003943814.1| PREDICTED: uncharacterized protein LOC101038211 [Saimiri
boliviensis boliviensis]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
P +G G G+ + + P K+RR RT FT +QLEELEKAF+ +HYPDVF
Sbjct: 136 PQAGPGRSASDSGDPDKES--PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF------ 187
Query: 103 AVFKPFLLMKLDLVKNR 119
+ L ++LDLV++R
Sbjct: 188 --MREALALRLDLVESR 202
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 295 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 327
>gi|34419191|dbj|BAC84954.1| homeobox protein Chx10-1 [Cynops pyrrhogaster]
Length = 341
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L MK +L ++R +Q +
Sbjct: 146 KRKKRRHRTVFTAHQLEELEKAFSDAHYPDVYA--------REMLAMKTELPEDR-IQVW 196
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 197 FQNRRAKWRKREKCWGRSSVMAEY 220
>gi|390351642|ref|XP_797654.3| PREDICTED: uncharacterized protein LOC593067 [Strongylocentrotus
purpuratus]
Length = 392
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELEKAF+ THYPD++ + L +K DL + R VQ +
Sbjct: 110 KRKQRRIRTTFTSAQLKELEKAFNETHYPDIYK--------REELALKTDLTEAR-VQVW 160
>gi|328705901|ref|XP_003242937.1| PREDICTED: hypothetical protein LOC100570786 [Acyrthosiphon pisum]
Length = 400
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 35/53 (66%), Gaps = 10/53 (18%)
Query: 55 GEMEDYASLP----------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + Y SLP KRKQRR RTTFTS QL+ELE+AF THYPD++T
Sbjct: 125 GGLAAYKSLPYTTHDSILTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 177
>gi|270005124|gb|EFA01572.1| hypothetical protein TcasGA2_TC007133 [Tribolium castaneum]
Length = 169
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 37 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 83
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
Length = 613
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 9/85 (10%)
Query: 17 SRTGSYSHHSAEDSPSELSDLN----RMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYR 72
S +GS + + S S SD++ G PS +ED+S+ E E +L KRKQRR R
Sbjct: 163 SASGSPAGDGTKASSSCGSDVSGGHHNHGKPS----DEDISDCESEPGIAL-KRKQRRCR 217
Query: 73 TTFTSFQLEELEKAFSRTHYPDVFT 97
TTF++ QL+ELE+AF RT YPD++T
Sbjct: 218 TTFSASQLDELERAFERTQYPDIYT 242
>gi|449476334|ref|XP_002191285.2| PREDICTED: homeobox protein unc-4 homolog [Taeniopygia guttata]
Length = 381
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 40 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 90
Query: 124 Y 124
+
Sbjct: 91 W 91
>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
Length = 484
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 216 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|432892481|ref|XP_004075802.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oryzias
latipes]
Length = 299
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 139
>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
Length = 482
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 214 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 246
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RK+RR RTTFTS+QLEE+EK F RTHYPDV+ + L ++ DL + R VQ +
Sbjct: 134 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYC--------REQLALRCDLTEAR-VQVW 183
>gi|348509388|ref|XP_003442231.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 491
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDL+++R VQ
Sbjct: 96 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLIESR-VQV 146
Query: 124 Y 124
+
Sbjct: 147 W 147
>gi|339259158|ref|XP_003369765.1| homeobox protein SMOX-3 [Trichinella spiralis]
gi|316965991|gb|EFV50627.1| homeobox protein SMOX-3 [Trichinella spiralis]
Length = 395
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 22/81 (27%)
Query: 44 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIA 103
+SG G++D +RKQRR RTTFTS QL+ELEKAF THYPD++T
Sbjct: 283 TSGGGQQD-------------RRKQRRIRTTFTSSQLKELEKAFQATHYPDIYT------ 323
Query: 104 VFKPFLLMKLDLVKNRPVQTY 124
+ + K+DL + R VQ +
Sbjct: 324 --REEIAFKIDLTEAR-VQVW 341
>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
Length = 484
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 216 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 248
>gi|432868791|ref|XP_004071635.1| PREDICTED: homeobox protein unc-4 homolog [Oryzias latipes]
Length = 351
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDL+++R VQ
Sbjct: 96 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLIESR-VQV 146
Query: 124 Y 124
+
Sbjct: 147 W 147
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 56 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++E LP KRKQRR RTTFT+ QL+ELE+AF RTHYPD++T
Sbjct: 210 DVESEPDLPLKRKQRRSRTTFTAEQLDELERAFERTHYPDIYT 252
>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|327262713|ref|XP_003216168.1| PREDICTED: visual system homeobox 1-like [Anolis carolinensis]
Length = 371
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ + L MK +L ++R +Q +
Sbjct: 173 KRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------REMLAMKTELPEDR-IQVW 223
Query: 125 VAY--GTGRKKDLVYRRIEV 142
RK++ + R V
Sbjct: 224 FQNRRAKWRKREKCWGRSSV 243
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 99
>gi|194886957|ref|XP_001976718.1| GG19864 [Drosophila erecta]
gi|190659905|gb|EDV57118.1| GG19864 [Drosophila erecta]
Length = 453
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|126010754|gb|AAI33553.1| VSX1 protein [Bos taurus]
Length = 236
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ L MK +L ++R
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE--------MLAMKTELPEDR 207
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DL + P G G + E + PK+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 11 DLGELRKPGDGEGTPPAATEEEQ-----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 65
Query: 96 FTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++ L MK++L + V+ V + R K ++EV
Sbjct: 66 YSREE--------LAMKVNLPE---VRVQVWFQNRRAKWRRQEKLEV 101
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 19/106 (17%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DL + P G G + E + PK+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 9 DLGELRKPGDGEGTPPAAAEEEQ-----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 96 FTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
++ L MK++L + V+ V + R K +RR E
Sbjct: 64 YSREE--------LAMKVNLPE---VRVQVWFQNRRAK---WRRQE 95
>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
Length = 460
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 193 KRKQRRGRTTFTAEQLEELERAFERTHYPDIYT 225
>gi|170572557|ref|XP_001892152.1| homeobox protein [Brugia malayi]
gi|158602775|gb|EDP39026.1| homeobox protein, putative [Brugia malayi]
Length = 286
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 9/62 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
+ +RKQRR RTTFTS QL+ELE+AF THYPD++T + L M++DL + R VQ
Sbjct: 171 MERRKQRRIRTTFTSGQLKELERAFLETHYPDIYT--------REDLAMRIDLTEAR-VQ 221
Query: 123 TY 124
+
Sbjct: 222 VW 223
>gi|109726691|gb|ABG45802.1| paired box protein Pax-3-like protein [Bos taurus]
Length = 195
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 20 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 52
>gi|443715779|gb|ELU07595.1| hypothetical protein CAPTEDRAFT_70059, partial [Capitella teleta]
Length = 65
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELEKAF+ THYPD++T + + MK DL + R VQ +
Sbjct: 2 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYT--------REEIAMKTDLTEAR-VQVW 52
>gi|354505845|ref|XP_003514978.1| PREDICTED: paired box protein Pax-3-like, partial [Cricetulus
griseus]
Length = 288
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 20 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 52
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 21 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 53
>gi|348568378|ref|XP_003469975.1| PREDICTED: homeobox protein unc-4 homolog [Cavia porcellus]
Length = 619
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 13/69 (18%)
Query: 56 EMEDYASLPKR-----KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
E E Y+ P + K+RR RT FT +QLEELEKAF+ +HYPDVF + L
Sbjct: 171 ECESYSGDPDKESPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALA 222
Query: 111 MKLDLVKNR 119
++LDLV++R
Sbjct: 223 LRLDLVESR 231
>gi|348511737|ref|XP_003443400.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oreochromis
niloticus]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 61 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 93
>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
Length = 439
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 48 GEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ++ + E +P KRKQRR RTTFT+ QL+ELEKAF RT YPD++T
Sbjct: 160 GCKNSDNSDCESEPGIPLKRKQRRSRTTFTALQLDELEKAFERTQYPDIYT 210
>gi|297557144|gb|ADI46415.1| homeobox protein unc-4-like protein, partial [Monodelphis
domestica]
Length = 160
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 102 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 152
Query: 124 Y 124
+
Sbjct: 153 W 153
>gi|158289998|ref|XP_311581.3| AGAP010359-PA [Anopheles gambiae str. PEST]
gi|157018428|gb|EAA07188.4| AGAP010359-PA [Anopheles gambiae str. PEST]
Length = 172
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 45 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GRG D S+ E E L KRKQRR RTTFTS QLE LEKAF+RT YPDV+T
Sbjct: 104 GGRGS-DSSDTESEP-GILLKRKQRRSRTTFTSEQLEALEKAFTRTQYPDVYT 154
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 31 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 81
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 20 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 52
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 51 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RT YPD++T
Sbjct: 197 DKDEGLDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTRYPDIYT 245
>gi|195124301|ref|XP_002006632.1| GI18478 [Drosophila mojavensis]
gi|193911700|gb|EDW10567.1| GI18478 [Drosophila mojavensis]
Length = 464
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|432960958|ref|XP_004086512.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oryzias
latipes]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|431917932|gb|ELK17161.1| Paired box protein Pax-3 [Pteropus alecto]
Length = 320
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 52 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 84
>gi|410954493|ref|XP_003983899.1| PREDICTED: visual system homeobox 1 [Felis catus]
Length = 364
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L ++R +
Sbjct: 158 TLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTELPEDR-I 208
Query: 122 QTY 124
Q +
Sbjct: 209 QVW 211
>gi|402883434|ref|XP_003905223.1| PREDICTED: visual system homeobox 1 isoform 1 [Papio anubis]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 28/99 (28%)
Query: 26 SAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEK 85
S EDSPSE D N +++ +L KRK+RR+RT FT+ QLEELEK
Sbjct: 141 SDEDSPSE--DRN-----------------DLKASPTLGKRKKRRHRTVFTAHQLEELEK 181
Query: 86 AFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
AFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 182 AFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 211
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 84 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 134
>gi|118792272|ref|XP_320238.3| AGAP012303-PA [Anopheles gambiae str. PEST]
gi|116116821|gb|EAA00674.4| AGAP012303-PA [Anopheles gambiae str. PEST]
Length = 108
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 47 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 93
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|256070449|ref|XP_002571555.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 415
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T L +++DL + R VQ +
Sbjct: 176 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTRED--------LALRIDLTEAR-VQVW 226
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 22 YSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYAS--LP-----------KRKQ 68
Y+ S+ P D + +G+ SS +D +D AS LP K K+
Sbjct: 352 YAKESSLGEPELPPDSDTVGMDSSYLSVKDAGVKGPQDRASADLPSPLEKADSESNKGKK 411
Query: 69 RRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 412 RRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 454
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT L MK++L + R VQ +
Sbjct: 48 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRED--------LAMKINLTEAR-VQVW 98
>gi|3493363|dbj|BAA32556.1| Pax-3 [Oryzias latipes]
Length = 137
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Query: 63 LP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 102 LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 137
>gi|426245932|ref|XP_004016756.1| PREDICTED: paired mesoderm homeobox protein 2A [Ovis aries]
Length = 252
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEE 82
G P G + + G + D+ P KRKQRR RTTFTS QL+E
Sbjct: 45 AGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKE 104
Query: 83 LEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRK 132
LE+ F+ THYPD++T + L +K+ L + P + V GTG +
Sbjct: 105 LERVFAETHYPDIYT--------REELALKIAL-RTTPAEARVQGGTGAR 145
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMK 166
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++L + V+ V + R K ++EV
Sbjct: 167 VNLPE---VRVQVWFQNRRAKWRRQEKLEV 193
>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
Length = 322
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMK 166
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++L + V+ V + R K ++EV
Sbjct: 167 VNLPE---VRVQVWFQNRRAKWRRQEKLEV 193
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 25/127 (19%)
Query: 15 EYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTT 74
+Y +G +++ E ELS+L + G+ E + + PK+K RR RTT
Sbjct: 101 QYHDSGLFANKCEE----ELSELRKSVESDEGKSPESCKDDQ-------PKKKHRRNRTT 149
Query: 75 FTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKD 134
FT++QL ELE+AF ++HYPDV++ + L MK++L + V+ V + R K
Sbjct: 150 FTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRVQVWFQNRRAK- 197
Query: 135 LVYRRIE 141
+RR E
Sbjct: 198 --WRRQE 202
>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
Length = 414
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E VS+ + E L KRKQRR RTTFT+ QL+ELEKAF RT YPD++T
Sbjct: 202 NEGVSDCDSEPGIPL-KRKQRRSRTTFTAHQLDELEKAFERTQYPDIYT 249
>gi|363739532|ref|XP_414766.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Gallus gallus]
Length = 445
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 93 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 143
Query: 124 Y 124
+
Sbjct: 144 W 144
>gi|114681337|ref|XP_001149985.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan troglodytes]
gi|397518460|ref|XP_003829404.1| PREDICTED: visual system homeobox 1 isoform 1 [Pan paniscus]
Length = 365
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|26342783|dbj|BAC35048.1| unnamed protein product [Mus musculus]
Length = 192
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR 141
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 61 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRP 120
A+ KRK+RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R
Sbjct: 150 ANSQKRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYA--------REMLAMKTELPEDR- 200
Query: 121 VQTYVAY--GTGRKKDLVYRRIEVEIKF 146
+Q + RK++ + R V ++
Sbjct: 201 IQVWFQNRRAKWRKREKCWGRSSVMAEY 228
>gi|170045356|ref|XP_001850278.1| paired box protein [Culex quinquefasciatus]
gi|167868438|gb|EDS31821.1| paired box protein [Culex quinquefasciatus]
Length = 479
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + MK+DL + R
Sbjct: 87 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYT--------REEIAMKIDLTEAR 133
>gi|395734890|ref|XP_002814749.2| PREDICTED: uncharacterized protein LOC100444086 [Pongo abelii]
Length = 276
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|355784763|gb|EHH65614.1| Transcription factor VSX1, partial [Macaca fascicularis]
Length = 228
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L ++R +
Sbjct: 21 TLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTELPEDR-I 71
Query: 122 QTY 124
Q +
Sbjct: 72 QVW 74
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMK 166
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++L + V+ V + R K ++EV
Sbjct: 167 VNLPE---VRVQVWFQNRRAKWRRQEKLEV 193
>gi|344258001|gb|EGW14105.1| Paired box protein Pax-3 [Cricetulus griseus]
Length = 301
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 33 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 65
>gi|444513675|gb|ELV10425.1| Paired mesoderm homeobox protein 2B [Tupaia chinensis]
Length = 236
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 31/129 (24%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQNSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRI--- 140
E+ F+ THYPD++T + L +K+DL + R VQ R + RR+
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVPRTAARLRARGGRERRVLML 164
Query: 141 EVEIKFIPN 149
EV I +P
Sbjct: 165 EVRIPRVPK 173
>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
Short=Xrx1; AltName: Full=Retina and anterior neural
fold homeobox protein A
gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
Length = 322
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMK 166
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++L + V+ V + R K ++EV
Sbjct: 167 VNLPE---VRVQVWFQNRRAKWRRQEKLEV 193
>gi|195380433|ref|XP_002048975.1| GJ21339 [Drosophila virilis]
gi|194143772|gb|EDW60168.1| GJ21339 [Drosophila virilis]
Length = 464
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYT 211
>gi|47218913|emb|CAF98111.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ
Sbjct: 69 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQV 119
Query: 124 Y 124
+
Sbjct: 120 W 120
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|449269616|gb|EMC80374.1| Visual system homeobox 1, partial [Columba livia]
Length = 204
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ + L MK +L ++R +
Sbjct: 21 SQTKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------REMLAMKTELPEDR-I 71
Query: 122 QTYVA--YGTGRKKDLVYRRIEVEIKF 146
Q + RK++ + R V ++
Sbjct: 72 QVWFQNRRAKWRKREKCWGRSSVMAEY 98
>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_a [Homo sapiens]
gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
Length = 365
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|291410619|ref|XP_002721593.1| PREDICTED: visual system homeobox 1-like [Oryctolagus cuniculus]
Length = 405
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
L KRK+RR+RT F++ QLEELEKAFS HYPDV+ + L MK +L ++R +Q
Sbjct: 123 LGKRKKRRHRTVFSALQLEELEKAFSEAHYPDVYA--------REMLAMKTELPEDR-IQ 173
Query: 123 TY 124
+
Sbjct: 174 VW 175
>gi|296200374|ref|XP_002747576.1| PREDICTED: visual system homeobox 1 [Callithrix jacchus]
Length = 364
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 151 DLKASPTLSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 202
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 203 PEDR-IQVW 210
>gi|139948588|ref|NP_001077272.1| homeobox protein unc-4 homolog [Bos taurus]
gi|126010703|gb|AAI33625.1| UNCX protein [Bos taurus]
Length = 293
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 102 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 149
>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
Length = 614
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 44 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+S +ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++T
Sbjct: 187 NSKPSDEDISDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPDIYT 239
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|147899161|ref|NP_001080642.1| UNC homeobox [Xenopus laevis]
gi|28278689|gb|AAH44278.1| Uncx4.1-prov protein [Xenopus laevis]
gi|393689250|gb|AFN10839.1| UNC homeobox transcription factor [Xenopus laevis]
Length = 163
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 14/70 (20%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR---- 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 97 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESRVQVQ 148
Query: 120 --PVQTYVAY 127
P+ Y Y
Sbjct: 149 SSPLPMYALY 158
>gi|354505900|ref|XP_003515005.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Cricetulus griseus]
Length = 148
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|444731497|gb|ELW71850.1| Paired mesoderm homeobox protein 2A [Tupaia chinensis]
Length = 317
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 155 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 205
>gi|403256605|ref|XP_003920957.1| PREDICTED: uncharacterized protein LOC101038269 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 16 YSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTF 75
+S + + ++E S +EL + R G P +G ED G ED A K+KQRR RT F
Sbjct: 105 WSWSQPLENSASESSDTELPEKERGGEP---KGPEDSGAGGAEDPAK--KKKQRRQRTHF 159
Query: 76 TSFQLEELEKAFSRTHYPDV 95
TS QL+ELE F R YPD+
Sbjct: 160 TSQQLQELEATFQRNRYPDM 179
>gi|297706526|ref|XP_002830085.1| PREDICTED: visual system homeobox 1 isoform 1 [Pongo abelii]
Length = 365
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|126331693|ref|XP_001365345.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Monodelphis
domestica]
Length = 314
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|52353979|gb|AAU44354.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KR++RR+RT FTS QLEELEKAF HYPDV+ + L MK +L ++R +Q +
Sbjct: 148 KRRKRRHRTVFTSHQLEELEKAFHEAHYPDVYA--------REMLAMKTELPEDR-IQVW 198
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 199 FQNRRAKWRKREKCWGRSSVMAEY 222
>gi|402869237|ref|XP_003898672.1| PREDICTED: paired mesoderm homeobox protein 2B [Papio anubis]
Length = 314
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|345433362|dbj|BAK69338.1| paired-box transcription factor [Balanoglossus simodensis]
Length = 214
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ S GE D E LP KRKQRR RTTFT QLE LE+AF RTHYPD++T
Sbjct: 143 GILSRQDGESDC-----ELQPDLPLKRKQRRSRTTFTCEQLEHLERAFERTHYPDIYT 195
>gi|344258328|gb|EGW14432.1| Paired mesoderm homeobox protein 2B [Cricetulus griseus]
Length = 182
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 27/96 (28%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
E+ F+ THYPD++T + L +K+DL + R
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR 141
>gi|6094305|sp|Q26602.1|SMOX3_SCHMA RecName: Full=Homeobox protein SMOX-3
gi|552250|gb|AAA29930.1| paired-like homeodomain protein, partial [Schistosoma mansoni]
Length = 288
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T L +++DL + R VQ +
Sbjct: 1 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTRED--------LALRIDLTEAR-VQVW 51
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 13 LSEYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLP-------- 64
S S+T S+ ++ P + S G + E + Y+S+P
Sbjct: 24 FSSCSQTSSFQYNPIRSGPFSNPGCTPLSTASCTLGA--LREHQPTSYSSVPYKFFSDPS 81
Query: 65 ----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRP 120
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R
Sbjct: 82 GINEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR- 132
Query: 121 VQTY 124
VQ +
Sbjct: 133 VQVW 136
>gi|297260462|ref|XP_002798304.1| PREDICTED: visual system homeobox 1-like, partial [Macaca mulatta]
Length = 354
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 141 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 192
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 193 PEDR-IQVW 200
>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
Length = 479
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQRR RTTFT QLEELE+AF RTHYPD++T
Sbjct: 195 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTVEQLEELERAFERTHYPDIYT 248
>gi|348523580|ref|XP_003449301.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oreochromis
niloticus]
Length = 301
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 139
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|194318573|gb|ACF47676.1| paired box gene 3, partial [Capra hircus]
Length = 68
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 1 SAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 52
>gi|195430056|ref|XP_002063073.1| GK21727 [Drosophila willistoni]
gi|194159158|gb|EDW74059.1| GK21727 [Drosophila willistoni]
Length = 472
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+T
Sbjct: 161 GSRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYT 211
>gi|355563427|gb|EHH19989.1| Transcription factor VSX1, partial [Macaca mulatta]
Length = 246
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L ++R +
Sbjct: 39 TLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTELPEDR-I 89
Query: 122 QTY 124
Q +
Sbjct: 90 QVW 92
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S +RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 233 SFVRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR 282
>gi|157110497|ref|XP_001651130.1| hypothetical protein AaeL_AAEL015234 [Aedes aegypti]
gi|108868381|gb|EAT32606.1| AAEL015234-PA, partial [Aedes aegypti]
Length = 180
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
S +RKQRR RTTFT QLEELE AF++THYPDVFT L MK++L + R
Sbjct: 13 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRED--------LAMKINLTEARVQ 64
Query: 122 QTYVAYGTGRKKDLVYR 138
+ ++ R+K + +
Sbjct: 65 VSSTSFLQSREKSITQK 81
>gi|297289779|ref|XP_001112703.2| PREDICTED: homeobox protein unc-4 homolog, partial [Macaca mulatta]
Length = 149
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 100 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFV--------REALALRLDLVESR 147
>gi|73974940|ref|XP_852840.1| PREDICTED: paired mesoderm homeobox protein 2B [Canis lupus
familiaris]
Length = 314
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|407025359|gb|AFS65546.1| Alx1 [Patiria miniata]
Length = 393
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR RTTFTSFQLEE+E+ F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 105 KRKKRRNRTTFTSFQLEEMERVFQKTHYPDVYC--------REQLALRCDLTEAR-VQVW 155
>gi|327273654|ref|XP_003221595.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Anolis
carolinensis]
Length = 95
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
Query: 59 DYASL-PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVK 117
D+ L KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL +
Sbjct: 16 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTE 67
Query: 118 NR--PVQTYVAYGTGRK 132
R Q + A+ R+
Sbjct: 68 ARVQAEQKFAAHSKKRR 84
>gi|124111297|gb|ABM92047.1| PAX7 [Pan troglodytes]
Length = 54
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 6 KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 38
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPGS--CSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|45382115|ref|NP_990100.1| visual system homeobox 1 [Gallus gallus]
gi|25009570|sp|Q9IAL2.1|VSX1_CHICK RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein Chx10-1; AltName: Full=Transcription factor VSX1
gi|7211446|gb|AAF40312.1|AF178670_1 homeobox protein Chx10-1 [Gallus gallus]
Length = 350
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D SE +M AS KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ + L
Sbjct: 142 DASELKMP--ASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------REMLA 191
Query: 111 MKLDLVKNRPVQTYVA--YGTGRKKDLVYRRIEVEIKF 146
+K +L ++R +Q + RK++ + R V ++
Sbjct: 192 VKTELPEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 228
>gi|363733528|ref|XP_001234151.2| PREDICTED: paired mesoderm homeobox protein 2B [Gallus gallus]
Length = 250
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 194 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 244
>gi|426391199|ref|XP_004061968.1| PREDICTED: visual system homeobox 1 isoform 1 [Gorilla gorilla
gorilla]
Length = 365
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 49 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA-------- 193
Query: 106 KPFLLMKLDLVKNRPVQTY 124
+ L +K +L ++R +Q +
Sbjct: 194 REMLAVKTELPEDR-IQVW 211
>gi|46309511|ref|NP_996953.1| paired mesoderm homeobox protein 2A [Danio rerio]
gi|42542899|gb|AAH66448.1| Paired-like homeobox 2a [Danio rerio]
Length = 277
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 86 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 136
>gi|47220084|emb|CAG12232.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDL+++R VQ
Sbjct: 95 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLIESR-VQV 145
Query: 124 Y 124
+
Sbjct: 146 W 146
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
KR +RRYRTTFT FQL+ELE+AF +THYPDVF
Sbjct: 37 KRNERRYRTTFTQFQLDELERAFDKTHYPDVF 68
>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
Length = 617
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 29 DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELE 84
DS S+ N S ++ E+ D S P KRKQRR RTTF++ QLEELE
Sbjct: 160 DSAKPSSNSNNSDQCGSNSTHNKATDDEVSDCESEPGIALKRKQRRCRTTFSAAQLEELE 219
Query: 85 KAFSRTHYPDVFT 97
+AF RT YPD+FT
Sbjct: 220 RAFERTQYPDIFT 232
>gi|125809508|ref|XP_001361148.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|195154827|ref|XP_002018314.1| GL16831 [Drosophila persimilis]
gi|54636322|gb|EAL25725.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|194114110|gb|EDW36153.1| GL16831 [Drosophila persimilis]
Length = 461
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYT 211
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 139
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 247
>gi|296473008|tpg|DAA15123.1| TPA: UNC homeobox [Bos taurus]
Length = 213
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 102 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 149
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|154147573|ref|NP_001093670.1| visual system homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134254267|gb|AAI35614.1| vsx1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ + L +K +L
Sbjct: 138 DLKASSSQAKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------REMLALKTEL 189
Query: 116 VKNRPVQTYVAY--GTGRKKDLVYRRIEVEIKF 146
++R +Q + RK++ + R V ++
Sbjct: 190 PEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 221
>gi|395543713|ref|XP_003773758.1| PREDICTED: homeobox protein aristaless-like 4 [Sarcophilus
harrisii]
Length = 154
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 15/95 (15%)
Query: 36 DLNRMGVPSSG-RGEEDVSEGE----MEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSR 89
D N +GV +G +G +D + + ME S K K+RR RTTFTS+QLEELEK F +
Sbjct: 24 DSNYLGVKEAGVKGSQDRAGTDLPSPMEKADSESNKGKKRRNRTTFTSYQLEELEKVFQK 83
Query: 90 THYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
THYPDV+ + L M+ DL + R VQ +
Sbjct: 84 THYPDVYA--------REQLAMRTDLTEAR-VQVW 109
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF +THYPDVFT + L MK++L + R VQ +
Sbjct: 93 RRKQRRNRTTFTLQQLEELESAFVQTHYPDVFT--------REDLAMKINLTEAR-VQVW 143
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 214 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 264
>gi|4633284|gb|AAD26698.1|AF117979_1 homeodomain transcription factor NBPHOX [Homo sapiens]
gi|1841338|dbj|BAA11555.1| NBPhox [Homo sapiens]
gi|5672611|dbj|BAA82670.1| NBPhox [Homo sapiens]
Length = 314
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|432114786|gb|ELK36541.1| Visual system homeobox 1 [Myotis davidii]
Length = 221
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L MK +L ++R +Q +
Sbjct: 23 KRKKRRHRTVFTNQQLEELEKAFSEAHYPDVYA--------REMLAMKTELPEDR-IQVW 73
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 224 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 274
>gi|344280090|ref|XP_003411818.1| PREDICTED: visual system homeobox 1-like [Loxodonta africana]
Length = 366
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L MK L ++R VQ +
Sbjct: 162 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------RETLAMKTKLPEDR-VQVW 212
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 58 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 108
>gi|397518462|ref|XP_003829405.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan paniscus]
gi|410054951|ref|XP_003953742.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|148224192|ref|NP_001084385.1| paired-like homeobox 2a [Xenopus laevis]
gi|38425325|gb|AAR19764.1| homeodomain protein [Xenopus laevis]
gi|115529155|gb|AAI24892.1| Phox2a protein [Xenopus laevis]
Length = 281
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 139
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 249
>gi|195058142|ref|XP_001995396.1| GH23137 [Drosophila grimshawi]
gi|193899602|gb|EDV98468.1| GH23137 [Drosophila grimshawi]
Length = 351
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYT 211
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 258
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 249
>gi|194756342|ref|XP_001960438.1| GF11512 [Drosophila ananassae]
gi|190621736|gb|EDV37260.1| GF11512 [Drosophila ananassae]
Length = 458
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+T
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYT 211
>gi|432956147|ref|XP_004085652.1| PREDICTED: homeobox protein unc-4 homolog [Oryzias latipes]
Length = 151
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 95 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 142
>gi|18860107|ref|NP_573242.1| unc-4 [Drosophila melanogaster]
gi|54036548|sp|O77215.1|UNC4_DROME RecName: Full=Homeobox protein unc-4; AltName: Full=Paired-like
homeodomain protein unc-4; Short=DPHD-1
gi|3641287|gb|AAC36333.1| paired-like homeodomain protein UNC-4 [Drosophila melanogaster]
gi|7293384|gb|AAF48762.1| unc-4 [Drosophila melanogaster]
gi|115646544|gb|ABJ17079.1| RT01021p [Drosophila melanogaster]
Length = 428
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 58 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 111
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 112 ----MREALAMRLDLKESR 126
>gi|402883438|ref|XP_003905225.1| PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]
Length = 301
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 28/99 (28%)
Query: 26 SAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEK 85
S EDSPSE D N +++ +L KRK+RR+RT FT+ QLEELEK
Sbjct: 141 SDEDSPSE--DRN-----------------DLKASPTLGKRKKRRHRTVFTAHQLEELEK 181
Query: 86 AFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
AFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 182 AFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 211
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 206 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 256
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 139
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 119 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 169
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 247
>gi|291384330|ref|XP_002708569.1| PREDICTED: paired-like homeobox 2a-like [Oryctolagus cuniculus]
Length = 290
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Query: 43 PSSGRGEEDVSEGEMEDYASLP-----------------KRKQRRYRTTFTSFQLEELEK 85
P G + + G + D+ P KRKQRR RTTFTS QL+ELE+
Sbjct: 53 PCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELER 112
Query: 86 AFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 113 VFAETHYPDIYT--------REELALKIDLTEAR-VQVW 142
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 47 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 97
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 185 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 235
>gi|350593920|ref|XP_003359706.2| PREDICTED: paired box protein Pax-3-like, partial [Sus scrofa]
Length = 136
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 20 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 52
>gi|281340875|gb|EFB16459.1| hypothetical protein PANDA_013398 [Ailuropoda melanoleuca]
Length = 412
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 184 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 231
>gi|397518464|ref|XP_003829406.1| PREDICTED: visual system homeobox 1 isoform 3 [Pan paniscus]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|112820188|gb|ABI23975.1| visual system homeobox 1 transcript variant 3 [Homo sapiens]
Length = 280
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|410054957|ref|XP_003953745.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT L MK++L + R VQ +
Sbjct: 66 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRED--------LAMKINLTEAR-VQVW 116
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 259
>gi|358337692|dbj|GAA56038.1| homeobox protein SMOX-3 [Clonorchis sinensis]
Length = 1388
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 30/150 (20%)
Query: 15 EYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLP---KRKQRRY 71
+Y+ +GS + H+A + + P+ G + + A++ +RKQRR
Sbjct: 1072 QYASSGSPNEHNANITEGCFN-------PTVGHQRSPILPAGSANLATMTLQERRKQRRI 1124
Query: 72 RTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGR 131
RTTFTS QL+ELE+AF THYPD++T + + +++DL + R V + R
Sbjct: 1125 RTTFTSSQLKELERAFQETHYPDIYT--------REDIALRIDLTEAR-----VWFQNRR 1171
Query: 132 KKDLVYRRIEVEIKFI----PNDLVIFLTP 157
K +R++E ++ + P +L + + P
Sbjct: 1172 AK---FRKLERSVQPVSRSNPPELQLMVVP 1198
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 261
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 261
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 261
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 189 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 239
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 261
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 213 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 263
>gi|432108245|gb|ELK33133.1| Paired mesoderm homeobox protein 2B [Myotis davidii]
Length = 236
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 27/96 (28%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 39 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 96
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
E+ F+ THYPD++T + L +K+DL + R
Sbjct: 97 ERVFAETHYPDIYT--------REELALKIDLTEAR 124
>gi|402883436|ref|XP_003905224.1| PREDICTED: visual system homeobox 1 isoform 2 [Papio anubis]
Length = 280
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 28/99 (28%)
Query: 26 SAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEK 85
S EDSPSE D N +++ +L KRK+RR+RT FT+ QLEELEK
Sbjct: 141 SDEDSPSE--DRN-----------------DLKASPTLGKRKKRRHRTVFTAHQLEELEK 181
Query: 86 AFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
AFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 182 AFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 211
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPGS--CSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 259
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 259
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ S G + E +P KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 147 GDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 198
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 259
>gi|335304550|ref|XP_003359967.1| PREDICTED: visual system homeobox 1-like [Sus scrofa]
Length = 364
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 211
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 210 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 260
>gi|332210907|ref|XP_003254555.1| PREDICTED: paired mesoderm homeobox protein 2A [Nomascus
leucogenys]
Length = 287
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 90 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 140
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 259
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 123 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 173
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 6/65 (9%)
Query: 33 ELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHY 92
E D+N SS G+ D ++G+ K+K RR RTTFT+FQL ELE+AF ++HY
Sbjct: 56 EEDDINSDNDLSSNDGKSDEADGDSS------KKKLRRNRTTFTTFQLHELERAFEKSHY 109
Query: 93 PDVFT 97
PDV+T
Sbjct: 110 PDVYT 114
>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
impatiens]
Length = 522
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ S G + E +P KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 192 GDRKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 243
>gi|372266156|ref|NP_001243201.1| visual system homeobox 1 isoform d [Homo sapiens]
gi|112820194|gb|ABI23978.1| visual system homeobox 1 transcript variant 6 [Homo sapiens]
Length = 301
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|158905366|gb|ABW82162.1| Uncx4.1 [Pantherophis guttatus]
Length = 131
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 83 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 130
>gi|312377652|gb|EFR24431.1| hypothetical protein AND_10977 [Anopheles darlingi]
Length = 167
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S +RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 113 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 162
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 28/101 (27%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 114 ERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|402862720|ref|XP_003895694.1| PREDICTED: homeobox protein unc-4 homolog [Papio anubis]
Length = 490
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 101 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 148
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S +RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 231 SFVRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFT--------REDLAMKINLTEAR 280
>gi|328711031|ref|XP_001947663.2| PREDICTED: hypothetical protein LOC100159095 [Acyrthosiphon pisum]
Length = 578
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 18/102 (17%)
Query: 18 RTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
R + S + ++DS SE G P G + D + G ED A+ K+RR RT F +
Sbjct: 189 RIINMSGNHSDDSASE------NGSPKKGGVDGDSAAGSSEDLAN----KRRRSRTNFNT 238
Query: 78 FQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
+QLEELE+AF +HYPDVF + L ++LDL ++R
Sbjct: 239 WQLEELERAFLASHYPDVF--------MREALALRLDLKESR 272
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 261
>gi|119630510|gb|EAX10105.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_b [Homo sapiens]
Length = 386
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNR 119
++R
Sbjct: 204 PEDR 207
>gi|426241769|ref|XP_004014761.1| PREDICTED: visual system homeobox 1 [Ovis aries]
Length = 310
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L ++R +Q +
Sbjct: 106 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTELPEDR-IQVW 156
>gi|321453331|gb|EFX64576.1| hypothetical protein DAPPUDRAFT_334067 [Daphnia pulex]
Length = 265
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 45 SGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+GR ED ++E + KRKQRR RTTF++ QLEELE+AF R+ YPDV+T
Sbjct: 194 AGRSSEDEDSSDIESEPGIALKRKQRRSRTTFSADQLEELERAFERSQYPDVYT 247
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 99 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 149
>gi|56411858|gb|AAV88499.1| paired-type homeodomain protein [Drosophila mauritiana]
Length = 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 44 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 97
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 98 ----MREALAMRLDLKESR 112
>gi|56411856|gb|AAV88498.1| paired-type homeodomain protein [Drosophila simulans]
Length = 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 44 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 97
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 98 ----MREALAMRLDLKESR 112
>gi|341883114|gb|EGT39049.1| CBN-CEH-17 protein [Caenorhabditis brenneri]
Length = 231
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 194
>gi|56411860|gb|AAV88500.1| paired-type homeodomain protein [Drosophila sechellia]
Length = 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 44 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 97
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 98 ----MREALAMRLDLKESR 112
>gi|426391205|ref|XP_004061971.1| PREDICTED: visual system homeobox 1 isoform 4 [Gorilla gorilla
gorilla]
Length = 280
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 49 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA-------- 193
Query: 106 KPFLLMKLDLVKNRPVQTY 124
+ L +K +L ++R +Q +
Sbjct: 194 REMLAVKTELPEDR-IQVW 211
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT + L ++++L + R VQ +
Sbjct: 51 RRKQRRNRTTFTVQQLEELESAFAKTHYPDVFT--------REDLALRINLTEAR-VQVW 101
>gi|268564155|ref|XP_002639030.1| C. briggsae CBR-CEH-17 protein [Caenorhabditis briggsae]
Length = 234
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 194
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 11/87 (12%)
Query: 39 RMGVPSSGRGEEDVSE-GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R+ +SG + D+ E GE D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 91 RVSPATSGPDKTDLDELGEKCD-SNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYV 149
Query: 98 STGSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+ +L + R VQ +
Sbjct: 150 --------REQLAMRTELTEAR-VQVW 167
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 207 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 257
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E +A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+
Sbjct: 41 EQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYA 82
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 105
>gi|426391201|ref|XP_004061969.1| PREDICTED: visual system homeobox 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 301
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 49 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA-------- 193
Query: 106 KPFLLMKLDLVKNRPVQTY 124
+ L +K +L ++R +Q +
Sbjct: 194 REMLAVKTELPEDR-IQVW 211
>gi|353230507|emb|CCD76678.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 901
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+AF THYPD++T + L +++DL + R
Sbjct: 610 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYT--------REDLALRIDLTEAR 656
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 9/66 (13%)
Query: 33 ELSDLNRMG-VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTH 91
+L DL G P+ G EGE DY LP +K RR RTTFT++QL ELE AF R+H
Sbjct: 9 DLCDLREDGSTPTPG-----TPEGE--DY-KLPTKKHRRNRTTFTTYQLHELEHAFERSH 60
Query: 92 YPDVFT 97
YPDV++
Sbjct: 61 YPDVYS 66
>gi|322366546|gb|ADW95347.1| Unc4 [Paracentrotus lividus]
Length = 171
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+RR RT F +QLEELE+AF+ +HYPDVFT + L M+LDLV++R VQ +
Sbjct: 112 KRRRSRTNFNGWQLEELERAFNESHYPDVFT--------REALAMRLDLVESR-VQVW 160
>gi|395752027|ref|XP_003779346.1| PREDICTED: visual system homeobox 1 isoform 2 [Pongo abelii]
Length = 301
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNRPVQTY 124
++R +Q +
Sbjct: 204 PEDR-IQVW 211
>gi|405961985|gb|EKC27709.1| Homeobox protein ARX [Crassostrea gigas]
Length = 442
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 14/81 (17%)
Query: 44 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIA 103
SS +G++ G E ++S P RK RR RTTFT++QL +LE+AF +T YPDVFT
Sbjct: 91 SSDKGDD----GSDESFSSKP-RKIRRSRTTFTTYQLHQLERAFEKTQYPDVFT------ 139
Query: 104 VFKPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 140 --REELAMRLDLSEAR-VQVW 157
>gi|395507743|ref|XP_003758180.1| PREDICTED: visual system homeobox 1 [Sarcophilus harrisii]
Length = 346
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 49 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFK 106
E+ +SE E++ S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ +
Sbjct: 150 EDSLSEDKNELKTPTSHIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------R 201
Query: 107 PFLLMKLDLVKNRPVQTYVAY--GTGRKKDLVYRRIEVEIKF 146
L +K +L ++R +Q + RK++ + R V ++
Sbjct: 202 EMLALKTELPEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 242
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 37 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 87
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 60 YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+
Sbjct: 40 FAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYA 77
>gi|157875755|pdb|1FJL|A Chain A, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
gi|157875756|pdb|1FJL|B Chain B, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
gi|157875757|pdb|1FJL|C Chain C, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
Length = 81
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Query: 50 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++T
Sbjct: 1 EDISDCESEPGIAL-KRKQRRSRTTFSASQLDELERAFERTQYPDIYT 47
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 215 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 265
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 12/98 (12%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PK+K RR RTTFT+FQL ELE+AF ++HYPDV++ + L +K++L + R VQ
Sbjct: 11 PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYS--------REELALKVNLPEVR-VQV 61
Query: 124 YVAYGTG---RKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
+ R++ L I+++ P L+ F PS
Sbjct: 62 WFQNRRAKWRRQEKLEVSSIKLQDTSSPPSLLSFGRPS 99
>gi|170062890|ref|XP_001866865.1| retinal homeobox protein [Culex quinquefasciatus]
gi|167880713|gb|EDS44096.1| retinal homeobox protein [Culex quinquefasciatus]
Length = 441
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 19/85 (22%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTS 98
+MG S G ED K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 367 KMGSGSDDEGGED----------GCSKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS- 415
Query: 99 TGSIAVFKPFLLMKLDLVKNRPVQT 123
+ L MK++L + R VQT
Sbjct: 416 -------REELAMKVNLPEVR-VQT 432
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 258
>gi|170038395|ref|XP_001847036.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882013|gb|EDS45396.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 68
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S +RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 16 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 65
>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
Length = 292
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++
Sbjct: 90 DADGGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYS 135
>gi|122937321|ref|NP_001073930.1| homeobox protein unc-4 homolog [Homo sapiens]
gi|189037644|sp|A6NJT0.1|UNC4_HUMAN RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
Length = 531
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 101 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 148
>gi|348581289|ref|XP_003476410.1| PREDICTED: visual system homeobox 1-like [Cavia porcellus]
Length = 425
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 22/105 (20%)
Query: 20 GSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQ 79
G HH+A P+E L+ ED S+ ++ L KRK+RR+RT FT+ Q
Sbjct: 202 GKEDHHTALSVPTEEDSLS-----------EDKSDPKVSP--GLGKRKKRRHRTVFTAQQ 248
Query: 80 LEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
LEELEKAF HYPDV+ + L +K L ++R +Q +
Sbjct: 249 LEELEKAFREAHYPDVYA--------REMLALKTQLPEDR-IQVW 284
>gi|332259353|ref|XP_003278751.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Nomascus leucogenys]
Length = 504
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 102 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 149
>gi|334312715|ref|XP_003339770.1| PREDICTED: visual system homeobox 1-like [Monodelphis domestica]
Length = 348
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 49 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFK 106
E+ +SE E++ S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ +
Sbjct: 151 EDSLSEDKSELKTSTSHIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYA--------R 202
Query: 107 PFLLMKLDLVKNRPVQTYVAY--GTGRKKDLVYRRIEVEIKF 146
L +K +L ++R +Q + RK++ + R V ++
Sbjct: 203 EMLALKTELPEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 243
>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
Length = 292
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++
Sbjct: 90 DADGGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYS 135
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 222 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 272
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Query: 42 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+P+ GE SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 101 LPAGSGGEGKPSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 150
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+R QRR RTTFT QLEELE+AF++THYPDVFT + L MK++L + R VQ +
Sbjct: 295 RRGQRRNRTTFTVQQLEELERAFAQTHYPDVFT--------REDLAMKINLTEAR-VQVW 345
>gi|344296919|ref|XP_003420149.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A-like [Loxodonta africana]
Length = 262
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 66 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 116
>gi|350580147|ref|XP_003480752.1| PREDICTED: hypothetical protein LOC100738855, partial [Sus scrofa]
Length = 397
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 349 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 395
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMK 112
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK
Sbjct: 286 SDGKLSD-EDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMK 336
Query: 113 LDLVKNRPVQTYVAYGTGRKKDLVYRRIEV 142
++L + V+ V + R K ++EV
Sbjct: 337 VNLPE---VRVQVWFQNRRAKWRRQEKLEV 363
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 139 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 189
>gi|308497829|ref|XP_003111101.1| CRE-CEH-17 protein [Caenorhabditis remanei]
gi|308240649|gb|EFO84601.1| CRE-CEH-17 protein [Caenorhabditis remanei]
Length = 231
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 194
>gi|194753694|ref|XP_001959145.1| GF12207 [Drosophila ananassae]
gi|190620443|gb|EDV35967.1| GF12207 [Drosophila ananassae]
Length = 925
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 529 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 587
Query: 96 FT 97
++
Sbjct: 588 YS 589
>gi|350406116|ref|XP_003487660.1| PREDICTED: retinal homeobox protein Rx1-like [Bombus impatiens]
Length = 305
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVWF 124
Query: 126 AY--GTGRKKDLVYRR 139
RKK+ V R
Sbjct: 125 QNRRAKWRKKEKVLGR 140
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E +A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+
Sbjct: 120 EQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYA 161
>gi|449504259|ref|XP_002198614.2| PREDICTED: homeobox protein aristaless-like 4 [Taeniopygia guttata]
Length = 429
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 188 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 234
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+ +RKQRR RTTFT QLEELEKAF++THYPDVF + L M+++L + R V
Sbjct: 42 AFARRKQRRNRTTFTLQQLEELEKAFAQTHYPDVF--------MREDLAMRINLTEAR-V 92
Query: 122 QTY 124
Q +
Sbjct: 93 QVW 95
>gi|224047324|ref|XP_002195530.1| PREDICTED: visual system homeobox 1 [Taeniopygia guttata]
Length = 260
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 43 PSSGRGEEDVSE-----GEMEDY---ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 94
P + R +E++S+ G+ D S KRK+RR+RT FT+ QLEELEKAF+ HYPD
Sbjct: 34 PDARRHKENISDEDSLSGDASDLKMTTSQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPD 93
Query: 95 VFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAY--GTGRKKDLVYRRIEVEIKF 146
V+ + L +K +L ++R +Q + RK++ + R V ++
Sbjct: 94 VYA--------REMLAVKTELPEDR-IQVWFQNRRAKWRKREKCWGRSSVMAEY 138
>gi|395521290|ref|XP_003764751.1| PREDICTED: paired mesoderm homeobox protein 2A [Sarcophilus
harrisii]
Length = 294
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 90 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 140
>gi|351695035|gb|EHA97953.1| Paired mesoderm homeobox protein 2B [Heterocephalus glaber]
Length = 300
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 145
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLEELE AF++THYPDVFT L +K++L + R VQ +
Sbjct: 151 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRED--------LALKINLTEAR-VQVW 201
>gi|341892467|gb|EGT48402.1| hypothetical protein CAEBREN_31131 [Caenorhabditis brenneri]
Length = 237
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 150 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 200
>gi|40806216|ref|NP_955457.1| visual system homeobox 1 isoform b [Homo sapiens]
gi|9802265|gb|AAF99657.1|AF251034_1 homeodomain protein RINX, S1 isoform [Homo sapiens]
gi|112820186|gb|ABI23974.1| visual system homeobox 1 transcript variant 2 [Homo sapiens]
Length = 239
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNR 119
++R
Sbjct: 204 PEDR 207
>gi|410054953|ref|XP_003953743.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 218
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNR 119
++R
Sbjct: 204 PEDR 207
>gi|410054955|ref|XP_003953744.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 236
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA 193
>gi|112820190|gb|ABI23976.1| visual system homeobox 1 transcript variant 4 [Homo sapiens]
Length = 218
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ + L +K +L
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA--------REMLAVKTEL 203
Query: 116 VKNR 119
++R
Sbjct: 204 PEDR 207
>gi|296479667|tpg|DAA21782.1| TPA: homeobox protein aristaless-like 4 [Bos taurus]
Length = 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 243
>gi|340709846|ref|XP_003393511.1| PREDICTED: retinal homeobox protein Rx1-like [Bombus terrestris]
Length = 304
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVWF 124
Query: 126 AY--GTGRKKDLVYRR 139
RKK+ V R
Sbjct: 125 QNRRAKWRKKEKVLGR 140
>gi|113195661|ref|NP_001037829.1| homeodomain protein Phox2 [Ciona intestinalis]
gi|106647225|gb|ABF82264.1| Phox2 [Ciona intestinalis]
Length = 154
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELEK F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 43 RRKQRRIRTTFTSSQLKELEKVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 93
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 25/127 (19%)
Query: 15 EYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTT 74
+Y TG +++ S E EL++L + S + +E S +D PK+K RR RTT
Sbjct: 101 QYHDTGLFANQSDE----ELAELRQ-----SIQMDEGKSPASSKD--DPPKKKHRRNRTT 149
Query: 75 FTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKD 134
FT++QL ELE+AF ++HYPDV++ + L MK++L + V+ V + R K
Sbjct: 150 FTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRVQVWFQNRRAK- 197
Query: 135 LVYRRIE 141
+RR E
Sbjct: 198 --WRRQE 202
>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
Length = 301
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 54 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++
Sbjct: 96 DGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYS 138
>gi|426391207|ref|XP_004061972.1| PREDICTED: visual system homeobox 1 isoform 5 [Gorilla gorilla
gorilla]
Length = 218
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 11/74 (14%)
Query: 49 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA-------- 193
Query: 106 KPFLLMKLDLVKNR 119
+ L +K +L ++R
Sbjct: 194 REMLAVKTELPEDR 207
>gi|110749929|ref|XP_001119902.1| PREDICTED: retinal homeobox protein Rx2 [Apis mellifera]
Length = 304
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVWF 124
Query: 126 AY--GTGRKKDLVYRR 139
RKK+ V R
Sbjct: 125 QNRRAKWRKKEKVLGR 140
>gi|258504658|gb|ACV72957.1| CEH-17 [Caenorhabditis remanei]
gi|258504660|gb|ACV72958.1| CEH-17 [Caenorhabditis remanei]
gi|258504662|gb|ACV72959.1| CEH-17 [Caenorhabditis remanei]
gi|258504666|gb|ACV72961.1| CEH-17 [Caenorhabditis remanei]
gi|258504668|gb|ACV72962.1| CEH-17 [Caenorhabditis remanei]
gi|258504670|gb|ACV72963.1| CEH-17 [Caenorhabditis remanei]
gi|258504672|gb|ACV72964.1| CEH-17 [Caenorhabditis remanei]
gi|258504674|gb|ACV72965.1| CEH-17 [Caenorhabditis remanei]
gi|258504676|gb|ACV72966.1| CEH-17 [Caenorhabditis remanei]
gi|258504678|gb|ACV72967.1| CEH-17 [Caenorhabditis remanei]
gi|258504680|gb|ACV72968.1| CEH-17 [Caenorhabditis remanei]
gi|258504684|gb|ACV72970.1| CEH-17 [Caenorhabditis remanei]
gi|258504686|gb|ACV72971.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 137 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 187
>gi|197359132|gb|ACH69782.1| retinal homeobox protein 2 [Anabarilius grahami]
Length = 284
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 14 SEYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRT 73
S Y TG +S E ++L D R V S R + E + PK+K RR RT
Sbjct: 58 SAYHDTGLFS---TEKCDTDLGDP-RSNVESDSRSPDAPDEDQ-------PKKKHRRNRT 106
Query: 74 TFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKK 133
TFT++QL ELE+AF ++HYPDV++ + L MK++L + V+ V + R K
Sbjct: 107 TFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRVQVWFQNRRAK 155
Query: 134 DLVYRRIE 141
+RR E
Sbjct: 156 ---WRRQE 160
>gi|372266239|ref|NP_001243200.1| visual system homeobox 1 isoform c [Homo sapiens]
gi|112820192|gb|ABI23977.1| visual system homeobox 1 transcript variant 5 [Homo sapiens]
Length = 236
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA 193
>gi|380023562|ref|XP_003695587.1| PREDICTED: retinal homeobox protein Rx2-like [Apis florea]
Length = 304
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 11/76 (14%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVWF 124
Query: 126 AY--GTGRKKDLVYRR 139
RKK+ V R
Sbjct: 125 QNRRAKWRKKEKVLGR 140
>gi|380021136|ref|XP_003694430.1| PREDICTED: uncharacterized protein LOC100866617 [Apis florea]
Length = 388
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
RMGV + R S+ + E L KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 48 RMGV--AKRKTSSGSDCDSEPGIPL-KRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 103
>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
[Bombus terrestris]
Length = 502
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 48 GEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ D D S P KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 167 GDRDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 220
>gi|195029473|ref|XP_001987597.1| GH19875 [Drosophila grimshawi]
gi|193903597|gb|EDW02464.1| GH19875 [Drosophila grimshawi]
Length = 395
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 22/103 (21%)
Query: 55 GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLD 114
G+ME RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LD
Sbjct: 142 GDMER-----PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLD 188
Query: 115 LVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
L + R VQ + + + +R+ E KF+ D +L P
Sbjct: 189 LSEAR-VQVWF-----QNRRAKWRKRE---KFMNQDKAGYLLP 222
>gi|195456007|ref|XP_002074962.1| GK22873 [Drosophila willistoni]
gi|194171047|gb|EDW85948.1| GK22873 [Drosophila willistoni]
Length = 395
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 139 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 188
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 189 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 213
>gi|99028957|ref|NP_001018616.2| homeobox protein unc-4 homolog [Danio rerio]
gi|189037646|sp|Q50D79.2|UNC4_DANRE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|94574302|gb|AAI16500.1| Unc4.1 homeobox (C. elegans) [Danio rerio]
Length = 470
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 9/61 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K+RR RT FT +QLEELEKA + +HYPDVF + L ++LDLV++R VQ
Sbjct: 97 PGCKRRRTRTNFTGWQLEELEKASNESHYPDVF--------MREALALRLDLVESR-VQV 147
Query: 124 Y 124
+
Sbjct: 148 W 148
>gi|379692648|gb|AFD10414.1| Pax3, partial [Capra hircus]
Length = 142
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+RKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 12 RRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 44
>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
Length = 902
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 528 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 586
Query: 96 FT 97
++
Sbjct: 587 YS 588
>gi|322788814|gb|EFZ14382.1| hypothetical protein SINV_12755 [Solenopsis invicta]
Length = 79
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
+ G +E++ G ED + K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 8 TGGGSDEELGAGCGEDINGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS----- 62
Query: 103 AVFKPFLLMKLDL 115
+ L MK++L
Sbjct: 63 ---REELAMKVNL 72
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 519 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 577
Query: 96 FT 97
++
Sbjct: 578 YS 579
>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
Length = 488
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP KRKQR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 199 RASAPQSDEGSDIDSEPD------LPLKRKQRGSRTTFTAEQLEELERAFERTHYPDIYT 252
>gi|284005034|ref|NP_001164681.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
gi|283464071|gb|ADB22619.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
Length = 264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
GVP R D S G + KRKQRR RTTFTS QL+ELE+AF THYPD++
Sbjct: 83 GVPYMHRVLHD-STGTIGSGGPGEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYK--- 138
Query: 101 SIAVFKPFLLMKLDLVKNRPVQTY 124
+ L +K DL + R VQ +
Sbjct: 139 -----REELALKTDLTEAR-VQVW 156
>gi|195401625|ref|XP_002059413.1| GJ18584 [Drosophila virilis]
gi|194142419|gb|EDW58825.1| GJ18584 [Drosophila virilis]
Length = 405
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 22/103 (21%)
Query: 55 GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLD 114
G+ME RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LD
Sbjct: 147 GDMER-----PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLD 193
Query: 115 LVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
L + R VQ + + + +R+ E KF+ D +L P
Sbjct: 194 LSEAR-VQVWF-----QNRRAKWRKRE---KFMNQDKAGYLLP 227
>gi|426391203|ref|XP_004061970.1| PREDICTED: visual system homeobox 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 236
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 49 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA 193
>gi|405959975|gb|EKC25942.1| Homeobox protein unc-4-like protein [Crassostrea gigas]
Length = 392
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 26 SAEDSPSELSDLNRMGVPS--SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEEL 83
SA S S+ + +G PS S D S+ + E A+ K+RR RT FT +QLEEL
Sbjct: 63 SASSPTSRNSNTHPLGSPSAKSSVKSPDSSDEDRESAAA----KRRRTRTNFTGWQLEEL 118
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
E+AF +HYPDVF + L ++LDLV++R VQ +
Sbjct: 119 ERAFQDSHYPDVF--------MREALALRLDLVESR-VQVW 150
>gi|258504656|gb|ACV72956.1| CEH-17 [Caenorhabditis remanei]
gi|258504664|gb|ACV72960.1| CEH-17 [Caenorhabditis remanei]
gi|258504682|gb|ACV72969.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 137 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 187
>gi|195119468|ref|XP_002004253.1| GI19825 [Drosophila mojavensis]
gi|193909321|gb|EDW08188.1| GI19825 [Drosophila mojavensis]
Length = 411
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 22/103 (21%)
Query: 55 GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLD 114
G+ME RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LD
Sbjct: 156 GDMER-----PRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLD 202
Query: 115 LVKNRPVQTYVAYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
L + R VQ + + R K +R+ E KF+ D +L P
Sbjct: 203 LSEAR-VQVW--FQNRRAK---WRKRE---KFMNQDKAGYLLP 236
>gi|149035039|gb|EDL89759.1| Unc4.1 homeobox (C. elegans) [Rattus norvegicus]
Length = 530
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 152
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 56 EME-DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
EME D PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 254 EMEADENGEPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 296
>gi|148687196|gb|EDL19143.1| Unc4.1 homeobox (C. elegans) [Mus musculus]
Length = 529
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 152
>gi|7305613|ref|NP_038730.1| homeobox protein unc-4 homolog [Mus musculus]
gi|81882119|sp|O08934.2|UNC4_MOUSE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|2597990|emb|CAA04542.1| transcriptional control factor [Mus musculus]
gi|7963719|gb|AAF71322.1| UNC4 protein [Mus musculus]
gi|30704666|gb|AAH51973.1| Uncx protein [Mus musculus]
Length = 530
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 152
>gi|443732882|gb|ELU17445.1| hypothetical protein CAPTEDRAFT_70989, partial [Capitella teleta]
Length = 60
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 68 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYVA- 126
QRRYRTTF+S QL+ELEK F RTHYPDVFT + L M++ L + R VQ +
Sbjct: 1 QRRYRTTFSSLQLDELEKTFQRTHYPDVFT--------REELAMRIQLTEAR-VQVWFQN 51
Query: 127 -YGTGRKKD 134
RKK+
Sbjct: 52 RRAKWRKKE 60
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 15/74 (20%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D +EGE K K+RR RTTFTS+QLEELEK F +THYPDV+ + L
Sbjct: 164 DKTEGESN------KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLA 209
Query: 111 MKLDLVKNRPVQTY 124
++ DL + R VQ +
Sbjct: 210 LRTDLTEAR-VQVW 222
>gi|312381183|gb|EFR26989.1| hypothetical protein AND_06563 [Anopheles darlingi]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GRG D S+ E E L KRKQRR RTTFT QLE LEKAF RT YPDV+T
Sbjct: 26 GRGS-DSSDTESEP-GILLKRKQRRSRTTFTGEQLEALEKAFQRTQYPDVYT 75
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D ++GE PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L
Sbjct: 126 DSADGEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELA 171
Query: 111 MKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
MK++L + V+ V + R K +RR E
Sbjct: 172 MKVNLPE---VRVQVWFQNRRAK---WRRQE 196
>gi|395752029|ref|XP_003779347.1| PREDICTED: visual system homeobox 1 isoform 3 [Pongo abelii]
Length = 236
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYA 193
>gi|307192280|gb|EFN75567.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 299
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVW 115
>gi|383861926|ref|XP_003706435.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 296
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVW 115
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 19/106 (17%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DL + P G + E + PK+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 9 DLGELRKPGDGESTPPAAAEEEQ-----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 96 FTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
++ L MK++L + V+ V + R K +RR E
Sbjct: 64 YSREE--------LAMKVNLPE---VRVQVWFQNRRAK---WRRQE 95
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 10/74 (13%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D +G+ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ L
Sbjct: 106 DGGDGKPSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE--------ELA 156
Query: 111 MKLDLVKNRPVQTY 124
MK++L + R VQ +
Sbjct: 157 MKVNLPEVR-VQVW 169
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 20/91 (21%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D ++GE PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L
Sbjct: 126 DSADGEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELA 171
Query: 111 MKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
MK++L + V+ V + R K +RR E
Sbjct: 172 MKVNLPE---VRVQVWFQNRRAK---WRRQE 196
>gi|114639252|ref|XP_001160733.1| PREDICTED: paired mesoderm homeobox protein 2A [Pan troglodytes]
Length = 234
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T L +K+DL + R VQ +
Sbjct: 37 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREE--------LALKIDLTEAR-VQVW 87
>gi|339253634|ref|XP_003372040.1| retinal homeobox protein Rax [Trichinella spiralis]
gi|316967607|gb|EFV52015.1| retinal homeobox protein Rax [Trichinella spiralis]
Length = 266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
P K RR RTTFT+FQL ELE+AF ++HYPDV+T L +K++L + R VQ
Sbjct: 78 PSGKIRRNRTTFTTFQLHELERAFEKSHYPDVYTREA--------LALKINLPEIR-VQV 128
Query: 124 YVAY--GTGRKKDLVYRRIEVEIKFIPNDLVIFLTPS 158
+ R+++ + R + E+ IP L PS
Sbjct: 129 WFQNRRAKWRRQEKMELRCQEELPPIPPKPAGCLFPS 165
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QL+ELEKAF RT YPDV+T
Sbjct: 352 KRKQRRSRTTFTAQQLDELEKAFERTQYPDVYT 384
>gi|331271828|gb|AED02519.1| paired box 3 protein [Coturnix japonica]
Length = 114
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
R P S G + SE + LP K KQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 29 RASAPQSDEGSDIDSEPD------LPLKGKQRRSRTTFTAEQLEELERAFERTHYPDIYT 82
>gi|307170800|gb|EFN62916.1| Homeobox protein ARX [Camponotus floridanus]
Length = 382
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVW 115
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 497 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 555
Query: 96 FT 97
++
Sbjct: 556 YS 557
>gi|395845575|ref|XP_003795505.1| PREDICTED: homeobox protein unc-4 homolog [Otolemur garnettii]
Length = 532
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 100 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 147
>gi|334327857|ref|XP_001369519.2| PREDICTED: paired mesoderm homeobox protein 2A-like [Monodelphis
domestica]
Length = 234
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 30 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 80
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLL 110
D +G+ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++ L
Sbjct: 106 DGGDGKPSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE--------ELA 156
Query: 111 MKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
MK++L + R VQ + + + +RR E
Sbjct: 157 MKVNLPEVR-VQVWF-----QNRRAKWRRQE 181
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+L KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L +K +L ++R +
Sbjct: 162 TLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REMLAVKTELPEDR-I 212
Query: 122 QTY 124
Q +
Sbjct: 213 QVW 215
>gi|28573684|ref|NP_788420.1| homeobrain [Drosophila melanogaster]
gi|28380639|gb|AAF46642.3| homeobrain [Drosophila melanogaster]
gi|66571176|gb|AAY51553.1| IP01393p [Drosophila melanogaster]
gi|220943354|gb|ACL84220.1| hbn-PA [synthetic construct]
gi|220953324|gb|ACL89205.1| hbn-PA [synthetic construct]
Length = 409
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 151 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 200
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 201 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 225
>gi|41615484|tpg|DAA03500.1| TPA_inf: HDC00631 [Drosophila melanogaster]
Length = 130
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 66 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 112
>gi|194753688|ref|XP_001959142.1| GF12736 [Drosophila ananassae]
gi|190620440|gb|EDV35964.1| GF12736 [Drosophila ananassae]
Length = 410
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 142 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVWF 192
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ + +R+ E KF+ D +L P
Sbjct: 193 -----QNRRAKWRKRE---KFMNQDKAGYLLP 216
>gi|9967884|emb|CAC06429.1| homeobrain protein [Drosophila melanogaster]
Length = 409
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 151 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 200
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 201 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 225
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 529 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 587
Query: 96 FT 97
++
Sbjct: 588 YS 589
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|260801387|ref|XP_002595577.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
gi|229280824|gb|EEN51589.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
Length = 499
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 52 VSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLM 111
V G+ PKR RR RT F S+QLEELE+AF +HYPDVF + L +
Sbjct: 101 VENGQDSGEGMPPKR--RRTRTNFNSWQLEELERAFQESHYPDVF--------MREALAL 150
Query: 112 KLDLVKNRPVQTY 124
+LDLV++R VQ +
Sbjct: 151 RLDLVESR-VQVW 162
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 530 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 588
Query: 96 FT 97
++
Sbjct: 589 YS 590
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 95
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 140 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 189
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 190 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 214
>gi|390459504|ref|XP_003732326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100409683 [Callithrix jacchus]
Length = 574
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 101 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 148
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 66 TGGGSDEEIGTGCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS----- 120
Query: 103 AVFKPFLLMKLDLVKNRPVQTY 124
+ L MK++L + R VQ +
Sbjct: 121 ---REELAMKVNLPEVR-VQVW 138
>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
Length = 881
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 512 DLNQTNNSEQGEKITSGSDDEGQD-ENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 570
Query: 96 FT 97
++
Sbjct: 571 YS 572
>gi|170592395|ref|XP_001900954.1| hypothetical protein Bm1_47465 [Brugia malayi]
gi|158591649|gb|EDP30254.1| hypothetical protein Bm1_47465 [Brugia malayi]
Length = 154
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 8/58 (13%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
S+ KRK+RR+RT FT FQ++ELEKAF HYPD++ + L MK ++ +R
Sbjct: 32 SISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDMYA--------RELLAMKTEIAVDR 81
>gi|344257984|gb|EGW14088.1| Paired mesoderm homeobox protein 2A [Cricetulus griseus]
Length = 139
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R
Sbjct: 72 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR 118
>gi|198458250|ref|XP_001360969.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
gi|198136274|gb|EAL25545.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
Length = 404
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 143 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 192
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 193 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 217
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|432090369|gb|ELK23795.1| Homeobox protein aristaless-like 4 [Myotis davidii]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 37 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 87
>gi|332016697|gb|EGI57540.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 287
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 9/59 (15%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R VQ +
Sbjct: 57 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR-VQVW 106
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 527 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 585
Query: 96 FT 97
++
Sbjct: 586 YS 587
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKP 107
G+ D +G+ D RK RR RTTFT+FQL +LE+AF +T YPDVFT +
Sbjct: 111 GDLDGMDGDPNDMGR--PRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFT--------RE 160
Query: 108 FLLMKLDLVKNRPVQTY 124
L M+LDL + R VQ +
Sbjct: 161 ELAMRLDLSEAR-VQVW 176
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 SDGKLSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
Length = 390
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT QLEELE+AF RT YPDV+T
Sbjct: 183 KRKQRRSRTTFTGEQLEELERAFQRTQYPDVYT 215
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 53 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 SDGKLSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK++L + V+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRV 187
Query: 124 YVAYGTGRKKDLVYRRIE 141
V + R K +RR E
Sbjct: 188 QVWFQNRRAK---WRRQE 202
>gi|324518078|gb|ADY46999.1| Homeobox protein ceh-10 [Ascaris suum]
Length = 307
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT FQ++ELEKAF HYPD++ + L MK +L ++R +Q +
Sbjct: 150 KRKKRRHRTIFTQFQIDELEKAFQEAHYPDMYA--------REVLAMKTELAEDR-IQVW 200
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 161 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 204
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 16/120 (13%)
Query: 8 NLILILSEYSRTGSYSHHSAEDSPSELS-DLNRMGVPSSGRG-EEDVSEGEMEDY-ASLP 64
+ IL L+ RT H ED+ + + S+G G +E++ G +D +
Sbjct: 32 DAILGLANNKRT----HQEMEDNARDAQENTGENSCNSTGGGSDEELGAGCGDDLNGNGG 87
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK++L + R VQ +
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPEVR-VQVW 138
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 564 DLNQTNNSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 622
Query: 96 FT 97
++
Sbjct: 623 YS 624
>gi|334326510|ref|XP_001373881.2| PREDICTED: retinal homeobox protein Rx1-like [Monodelphis
domestica]
Length = 208
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G P GR GE ++ PK+K RR RTTFT+FQL +LE+AF R+HYPDV++
Sbjct: 8 GEPVEGR---PPGSGEADE---APKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYS 58
>gi|301625790|ref|XP_002942085.1| PREDICTED: homeobox protein Hox-A7-like [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KQRR R ++S+QL+ELEKAF THYPDVFT L ++LDL++ R VQ +
Sbjct: 105 KQRRARANYSSWQLQELEKAFQATHYPDVFTREA--------LALRLDLIEAR-VQVW 153
>gi|195585242|ref|XP_002082398.1| GD25243 [Drosophila simulans]
gi|194194407|gb|EDX07983.1| GD25243 [Drosophila simulans]
Length = 411
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 153 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 202
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 203 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 227
>gi|260786572|ref|XP_002588331.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
gi|229273492|gb|EEN44342.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
Length = 149
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R
Sbjct: 97 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR 143
>gi|8393133|ref|NP_058875.1| homeobox protein unc-4 homolog [Rattus norvegicus]
gi|81870610|sp|P97830.1|UNC4_RAT RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1; AltName: Full=Paired-type
homeodomain transcription factor 1
gi|1871471|dbj|BAA13452.1| paired-type homeodomain transcription factor [Rattus norvegicus]
Length = 530
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALAVRLDLVESR 152
>gi|397514171|ref|XP_003827369.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pan
paniscus]
Length = 309
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 130 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 173
>gi|354475607|ref|XP_003500019.1| PREDICTED: visual system homeobox 1-like [Cricetulus griseus]
Length = 318
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L +K +L ++R +Q +
Sbjct: 113 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REMLAVKTELPEDR-IQVW 163
>gi|198475763|ref|XP_001357148.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
gi|198137948|gb|EAL34215.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 49 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
++D+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++T
Sbjct: 199 DDDLSDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPDIYT 246
>gi|115774740|ref|XP_782932.2| PREDICTED: uncharacterized protein LOC577625 [Strongylocentrotus
purpuratus]
Length = 466
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 9/57 (15%)
Query: 68 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RR RT F +QLEELE+AF+ +HYPDVFT + L M+LDLV++R VQ +
Sbjct: 112 RRRSRTNFNGWQLEELERAFNESHYPDVFT--------REALAMRLDLVESR-VQVW 159
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDL 115
E D K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL
Sbjct: 167 EKADGGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDL 218
Query: 116 VKNRPVQTY 124
+ R VQ +
Sbjct: 219 TEAR-VQVW 226
>gi|198432262|ref|XP_002120802.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 446
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
Query: 58 EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVK 117
+D A + K+RR RT F+++QLEELEKAF +HYPDV+ + L ++LDLV+
Sbjct: 123 DDSAENQQNKRRRTRTNFSTWQLEELEKAFGNSHYPDVY--------MREALALRLDLVE 174
Query: 118 NRPVQTY 124
+R VQ +
Sbjct: 175 SR-VQVW 180
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|321456738|gb|EFX67838.1| hypothetical protein DAPPUDRAFT_8649 [Daphnia pulex]
Length = 78
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+AF THYPD++T + + +++DL + R VQ +
Sbjct: 15 KRKQRRIRTTFTSSQLKELERAFQETHYPDIYT--------REEIAIRIDLTEAR-VQVW 65
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 95
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 522 DLNQTNSSEQGEKITSGSDDEGQD-DNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 580
Query: 96 FT 97
++
Sbjct: 581 YS 582
>gi|194892099|ref|XP_001977594.1| GG19131 [Drosophila erecta]
gi|190649243|gb|EDV46521.1| GG19131 [Drosophila erecta]
Length = 629
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 239 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 292
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 293 ----MREALAMRLDLKESR 307
>gi|345801489|ref|XP_548725.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Canis lupus familiaris]
Length = 542
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 105 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 152
>gi|198470007|ref|XP_001355189.2| GA19478 [Drosophila pseudoobscura pseudoobscura]
gi|198147137|gb|EAL32246.2| GA19478 [Drosophila pseudoobscura pseudoobscura]
Length = 615
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 263 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 316
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 317 ----MREALAMRLDLKESR 331
>gi|195346245|ref|XP_002039676.1| GM15768 [Drosophila sechellia]
gi|194135025|gb|EDW56541.1| GM15768 [Drosophila sechellia]
Length = 407
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 149 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 198
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 199 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 223
>gi|6983694|emb|CAB75355.1| Phox2b protein [Gallus gallus]
Length = 119
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 27/94 (28%)
Query: 41 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 83
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 36 GCPSLTPGS--CSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 93
Query: 84 EKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVK 117
E+ F+ THYPD++T + L +K+DL +
Sbjct: 94 ERVFAETHYPDIYT--------REELALKIDLTE 119
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 19/106 (17%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DL + P G + E + PK+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 9 DLGELRKPGDSEGTPPAAAEEEQ-----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 96 FTSTGSIAVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
++ L MK++L + V+ V + R K +RR E
Sbjct: 64 YSREE--------LAMKVNLPE---VRVQVWFQNRRAK---WRRQE 95
>gi|91089659|ref|XP_974185.1| PREDICTED: similar to gooseberry-neuro CG2692-PA [Tribolium
castaneum]
gi|270012692|gb|EFA09140.1| gooseberry-neuro [Tribolium castaneum]
Length = 338
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G E+ S+ E E L KRKQRR RTTF+ QLE LE+AFSRT YPDV+T
Sbjct: 158 GREEESDTESEPGIPL-KRKQRRSRTTFSGEQLEALERAFSRTQYPDVYT 206
>gi|397498077|ref|XP_003819820.1| PREDICTED: uncharacterized protein LOC100992087 [Pan paniscus]
Length = 591
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 113 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 160
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 12/72 (16%)
Query: 30 SPSELSDLNRMGVPSSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEK 85
S EL+ N SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+
Sbjct: 527 SSEELNQTN-----SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELER 578
Query: 86 AFSRTHYPDVFT 97
AF ++HYPDV++
Sbjct: 579 AFEKSHYPDVYS 590
>gi|195447188|ref|XP_002071103.1| GK25621 [Drosophila willistoni]
gi|194167188|gb|EDW82089.1| GK25621 [Drosophila willistoni]
Length = 637
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 250 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 303
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 304 ----MREALAMRLDLKESR 318
>gi|195486706|ref|XP_002091619.1| GE13762 [Drosophila yakuba]
gi|194177720|gb|EDW91331.1| GE13762 [Drosophila yakuba]
Length = 412
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 154 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 203
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 204 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 228
>gi|194881732|ref|XP_001974975.1| GG20821 [Drosophila erecta]
gi|190658162|gb|EDV55375.1| GG20821 [Drosophila erecta]
Length = 416
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTYV 125
RK RR RTTFT+FQL +LE+AF +T YPDVFT L M+LDL + R VQ +
Sbjct: 158 RKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTRED--------LAMRLDLSEAR-VQVW- 207
Query: 126 AYGTGRKKDLVYRRIEVEIKFIPNDLVIFLTP 157
+ R K +R+ E KF+ D +L P
Sbjct: 208 -FQNRRAK---WRKRE---KFMNQDKAGYLLP 232
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GR D S+ E E L KRKQRR RTTF++ Q+EELE+AF RT YPD++T
Sbjct: 140 GRLGNDESDCESEPGIPL-KRKQRRSRTTFSAEQVEELERAFERTQYPDIYT 190
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK++L + V+
Sbjct: 131 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRV 179
Query: 124 YVAYGTGRKKDLVYRRIE 141
V + R K +RR E
Sbjct: 180 QVWFQNRRAK---WRRQE 194
>gi|195351788|ref|XP_002042411.1| GM13524 [Drosophila sechellia]
gi|194124254|gb|EDW46297.1| GM13524 [Drosophila sechellia]
Length = 588
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 218 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 271
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 272 ----MREALAMRLDLKESR 286
>gi|426254107|ref|XP_004023535.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ovis aries]
Length = 173
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 8/59 (13%)
Query: 41 GVPS--SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+P S G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 63 GLPGGPSAPGDSKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 115
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 95
DLN+ G S+ E +D + K+K RR RTTFT++QL ELE+AF ++HYPDV
Sbjct: 513 DLNQTNNSEQGEKITSGSDDEGQD-ENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDV 571
Query: 96 FT 97
++
Sbjct: 572 YS 573
>gi|351698231|gb|EHB01150.1| Paired mesoderm homeobox protein 2A, partial [Heterocephalus
glaber]
Length = 70
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRKQRR RTTFTS QL+ELE+ F+ THYPD++T + L +K+DL + R VQ +
Sbjct: 7 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR-VQVW 57
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 12/72 (16%)
Query: 30 SPSELSDLNRMGVPSSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEK 85
S EL+ N SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+
Sbjct: 519 SSEELNQTN-----SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELER 570
Query: 86 AFSRTHYPDVFT 97
AF ++HYPDV++
Sbjct: 571 AFEKSHYPDVYS 582
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 14/78 (17%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PK+K RR RTTFT++QL ELE+AF ++HYPDV++ L MK++L + V+
Sbjct: 5 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREE--------LAMKVNLPE---VRV 53
Query: 124 YVAYGTGRKKDLVYRRIE 141
V + R K +RR E
Sbjct: 54 QVWFQNRRAK---WRRQE 68
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 48 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ S G + + +P KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 195 GDGKTSSGSDCDSEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 246
>gi|348538997|ref|XP_003456976.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 532
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 97 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 144
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 19/87 (21%)
Query: 48 GEED-----VSEGEM-----EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE D VS+ EM ED RK RR RTTFT++QL +LE+AF +T YPDVFT
Sbjct: 34 GESDSKVDSVSDSEMVEESIEDLNDTRPRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFT 93
Query: 98 STGSIAVFKPFLLMKLDLVKNRPVQTY 124
+ L M+LDL + R VQ +
Sbjct: 94 --------REELAMRLDLSEAR-VQVW 111
>gi|195396745|ref|XP_002056989.1| GJ16592 [Drosophila virilis]
gi|194146756|gb|EDW62475.1| GJ16592 [Drosophila virilis]
Length = 606
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 261 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 314
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 315 ----MREALAMRLDLKESR 329
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
DVS+ E E +L KRKQRR RTTFT+ QLE LE++F +T YPDV+T
Sbjct: 175 DVSDTESEPGLTL-KRKQRRSRTTFTAEQLEILERSFEKTQYPDVYT 220
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 211 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 243
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 66 TGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS----- 120
Query: 103 AVFKPFLLMKLDLVKNRPVQTY 124
+ L MK++L + R VQ +
Sbjct: 121 ---REELAMKVNLPEVR-VQVW 138
>gi|351706647|gb|EHB09566.1| Visual system homeobox 1 [Heterocephalus glaber]
Length = 299
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 11/78 (14%)
Query: 49 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFK 106
E+ +SE +++ L KRK+RR+RT FT+ QLEELEKAF HYPDV+ +
Sbjct: 86 EDSLSEDRSDLKASPGLGKRKKRRHRTVFTAQQLEELEKAFGEAHYPDVYA--------R 137
Query: 107 PFLLMKLDLVKNRPVQTY 124
L +K L ++R +Q +
Sbjct: 138 EMLALKTQLPEDR-IQVW 154
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 16/120 (13%)
Query: 8 NLILILSEYSRTGSYSHHSAEDSPSELS-DLNRMGVPSSGRG-EEDVSEGEMEDY-ASLP 64
+ IL L + RT H ED+ + + S+G G +E++ G +D +
Sbjct: 32 DAILGLVSHKRT----HQEMEDTSRDTQENTGENSCNSTGGGSDEELGAGCGDDINGNGG 87
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK++L + R VQ +
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPEVR-VQVW 138
>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
Length = 406
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 52 VSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E + E +P KRKQRR RTTFT QLE LE+AF RT YPDV+T
Sbjct: 167 CDESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYT 213
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
+L KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L K +L ++R +
Sbjct: 165 TLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REMLAAKTELPEDR-I 215
Query: 122 QTY 124
Q +
Sbjct: 216 QVW 218
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 66 TGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS----- 120
Query: 103 AVFKPFLLMKLDLVKNRPVQTY 124
+ L MK++L + R VQ +
Sbjct: 121 ---REELAMKVNLPEVR-VQVW 138
>gi|426245996|ref|XP_004023227.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
4-like [Ovis aries]
Length = 505
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 22 YSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYAS--LP-----------KRKQ 68
Y+ S+ P D + +G+ SS ++ +D AS LP K K+
Sbjct: 258 YAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASADLPSPLEKADSESNKGKK 317
Query: 69 RRYRTTFTSFQLEELEKAFSRTHYPDVF 96
RR RTTFTS+QLEELEK F +THYPDV+
Sbjct: 318 RRNRTTFTSYQLEELEKVFQKTHYPDVY 345
>gi|1616751|gb|AAC52830.1| homeodomain protein Uncx-4.1 [Mus musculus]
Length = 196
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 9/57 (15%)
Query: 68 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R VQ +
Sbjct: 1 RRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR-VQVW 48
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 66 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 116
>gi|195163882|ref|XP_002022778.1| GL14568 [Drosophila persimilis]
gi|194104801|gb|EDW26844.1| GL14568 [Drosophila persimilis]
Length = 613
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 263 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 316
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 317 ----MREALAMRLDLKESR 331
>gi|189240573|ref|XP_974212.2| PREDICTED: similar to AGAP010358-PA [Tribolium castaneum]
Length = 410
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 52 VSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E + E +P KRKQRR RTTFT QLE LE+AF RT YPDV+T
Sbjct: 171 CDESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYT 217
>gi|195132011|ref|XP_002010437.1| GI14686 [Drosophila mojavensis]
gi|193908887|gb|EDW07754.1| GI14686 [Drosophila mojavensis]
Length = 604
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 272 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 325
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 326 ----MREALAMRLDLKESR 340
>gi|321453327|gb|EFX64572.1| hypothetical protein DAPPUDRAFT_15023 [Daphnia pulex]
Length = 202
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 15 EYSRTGSYSHHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTT 74
E + +S SA D P L V + + D+S+ E E +L KRKQRR RTT
Sbjct: 93 ETANNNIFSWDSATDPPISGGGLC---VYTGSSSDCDLSDIESEPGITL-KRKQRRSRTT 148
Query: 75 FTSFQLEELEKAFSRTHYPDVFT 97
F++ QLEELE++F RT YPDV+T
Sbjct: 149 FSAEQLEELERSFERTQYPDVYT 171
>gi|195048270|ref|XP_001992500.1| GH24785 [Drosophila grimshawi]
gi|193893341|gb|EDV92207.1| GH24785 [Drosophila grimshawi]
Length = 625
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 265 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 318
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 319 ----MREALAMRLDLKESR 333
>gi|120975015|gb|ABM46803.1| ALX4 [Gorilla gorilla]
Length = 103
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR 101
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 39 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 89
>gi|195481142|ref|XP_002101532.1| GE17683 [Drosophila yakuba]
gi|194189056|gb|EDX02640.1| GE17683 [Drosophila yakuba]
Length = 631
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 240 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 293
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 294 ----MREALAMRLDLKESR 308
>gi|449281437|gb|EMC88517.1| Homeobox protein unc-4 like protein, partial [Columba livia]
Length = 89
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 11 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 58
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQT 123
PK+K RR RTTFT++QL ELE+AF ++HYPDV++ + L MK++L + V+
Sbjct: 138 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS--------REELAMKVNLPE---VRV 186
Query: 124 YVAYGTGRKKDLVYRRIE 141
V + R K +RR E
Sbjct: 187 QVWFQNRRAK---WRRQE 201
>gi|194767836|ref|XP_001966020.1| GF19454 [Drosophila ananassae]
gi|190622905|gb|EDV38429.1| GF19454 [Drosophila ananassae]
Length = 610
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTG 100
G PS G E+ G+ +D +S KR RR RT F S+QLEELE+AFS +HYPD+F
Sbjct: 235 GPPSEGSNEDGGFPGDGDDDSSAAKR--RRSRTNFNSWQLEELERAFSASHYPDIF---- 288
Query: 101 SIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 289 ----MREALAMRLDLKESR 303
>gi|125809511|ref|XP_001361149.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
gi|54636323|gb|EAL25726.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G ++ G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 158 LGGGAASAGSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+RKQRR RTTFT QLEELE AF++THYPDVFT
Sbjct: 48 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT 80
>gi|45709566|gb|AAH67706.1| LOC407678 protein, partial [Danio rerio]
Length = 271
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 21/103 (20%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
PSSG +++ E KQRR R ++S+QLEELEK F THYPD+F
Sbjct: 80 PSSGHPADNIDEPR--------PVKQRRARANYSSWQLEELEKTFQSTHYPDIFMREA-- 129
Query: 103 AVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIK 145
L ++LDL++ R VQ + + R K + R+++++I+
Sbjct: 130 ------LALRLDLIEAR-VQVW--FQNRRAK--MRRQLKLQIQ 161
>gi|17506283|ref|NP_491393.1| Protein CEH-17 [Caenorhabditis elegans]
gi|8515894|gb|AAF76229.1|AF272397_1 CEH-17 [Caenorhabditis elegans]
gi|351059719|emb|CCD67311.1| Protein CEH-17 [Caenorhabditis elegans]
Length = 237
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFTS QL+ELE++F THYPD++T + + M++DL + R VQ +
Sbjct: 146 RRKQRRIRTTFTSGQLKELERSFCETHYPDIYT--------REEIAMRIDLTEAR-VQVW 196
>gi|292611969|ref|XP_002661267.1| PREDICTED: hypothetical protein LOC407678 [Danio rerio]
Length = 312
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 21/103 (20%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSI 102
PSSG +++ E KQRR R ++S+QLEELEK F THYPD+F
Sbjct: 121 PSSGHPADNIDEPR--------PVKQRRARANYSSWQLEELEKTFQSTHYPDIFMREA-- 170
Query: 103 AVFKPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIEVEIK 145
L ++LDL++ R VQ + + R K + R+++++I+
Sbjct: 171 ------LALRLDLIEAR-VQVW--FQNRRAK--MRRQLKLQIQ 202
>gi|195154829|ref|XP_002018315.1| GL17644 [Drosophila persimilis]
gi|194114111|gb|EDW36154.1| GL17644 [Drosophila persimilis]
Length = 432
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G ++ G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 158 LGGGAASAGSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214
>gi|16905095|ref|NP_473409.1| visual system homeobox 1 [Mus musculus]
gi|25009568|sp|Q91V10.1|VSX1_MOUSE RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|15811381|gb|AAL08947.1|AF395732_1 visual system homeobox 1 [Mus musculus]
gi|15825170|gb|AAL09584.1|AF391757_1 homeodomain protein RINX [Mus musculus]
gi|15825172|gb|AAL09585.1|AF391758_1 homeodomain protein RINX [Mus musculus]
gi|16580161|gb|AAL11431.1| transcription factor VSX1 [Mus musculus]
gi|34785871|gb|AAH57647.1| Visual system homeobox 1 homolog (zebrafish) [Mus musculus]
gi|187953917|gb|AAI38461.1| Vsx1 protein [Mus musculus]
gi|223460705|gb|AAI38457.1| Vsx1 protein [Mus musculus]
Length = 363
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 63 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQ 122
L KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L K +L ++R +Q
Sbjct: 166 LGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REMLAAKTELPEDR-IQ 216
Query: 123 TY 124
+
Sbjct: 217 VW 218
>gi|441603513|ref|XP_004093153.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Nomascus leucogenys]
Length = 337
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
Length = 438
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 146 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 194
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 11/77 (14%)
Query: 50 EDVSEGEMEDYA--SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKP 107
+D S G + D S ++QRR RTTFT+ QL+ LEK F RTHYPD F +
Sbjct: 146 DDGSCGSLSDNGIISAKSKRQRRNRTTFTTAQLDALEKVFERTHYPDAF--------LRE 197
Query: 108 FLLMKLDLVKNRPVQTY 124
L K+DL + R VQ +
Sbjct: 198 ELAKKVDLTEAR-VQVW 213
>gi|410902843|ref|XP_003964903.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 479
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDL+++R
Sbjct: 96 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLIESR 143
>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
rotundata]
Length = 398
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 162 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 210
>gi|322800798|gb|EFZ21674.1| hypothetical protein SINV_07081 [Solenopsis invicta]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 169 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 217
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QL+ELEKAF RT YPD++T
Sbjct: 127 KRKQRRSRTTFTAHQLDELEKAFERTQYPDIYT 159
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 20 GSYSHHSAE--DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
GS S E DSP+ L+ G +S V + + S+P +K RRYRTTFT+
Sbjct: 102 GSISGDDCETLDSPT----LDNDGALTSDEVSPTVLDTYRQQALSMPSKK-RRYRTTFTT 156
Query: 78 FQLEELEKAFSRTHYPDVF 96
QL+ELE+ F+RTHYPD+F
Sbjct: 157 HQLDELERVFNRTHYPDIF 175
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Query: 29 DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPK--RKQRRYRTTFTSFQLEELEKA 86
+SPSEL+ P R +S ++ D LPK K+RR RTTF++FQLEELEK
Sbjct: 109 ESPSELTG---SPAPCLARLRGPLSP-QLTDSMELPKSKNKKRRNRTTFSTFQLEELEKV 164
Query: 87 FSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
F +THYPDV+ L ++ DL + R VQ +
Sbjct: 165 FQKTHYPDVYAREQ--------LALRTDLTEAR-VQVW 193
>gi|395514737|ref|XP_003761569.1| PREDICTED: homeobox protein unc-4 homolog, partial [Sarcophilus
harrisii]
Length = 498
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
P K+RR RT FT +QLEELEKAF+ +HYPDVF + L ++LDLV++R
Sbjct: 60 PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVF--------MREALALRLDLVESR 107
>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 169 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 217
>gi|15146039|gb|AAK82936.1| pairberry 1 transcription factor [Schistocerca americana]
Length = 234
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 48 GEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G E + E +P KRKQRR RTTF+ QLE LE+AF RT YPDV+T
Sbjct: 115 GPSSADESDTESEPGIPLKRKQRRSRTTFSGDQLETLERAFQRTQYPDVYT 165
>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
Length = 496
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 47 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
+G+E V E E +D +S KRK +R RT+FT Q+E LEK F RTHYPDVF
Sbjct: 206 KGKESVVESEAKDGSSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVF 259
>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
Length = 497
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 47 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
+G+E V E E +D +S KRK +R RT+FT Q+E LEK F RTHYPDVF
Sbjct: 206 KGKESVVESEAKDGSSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVF 259
>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
Length = 404
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 168 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 216
>gi|355755063|gb|EHH58930.1| Retina and anterior neural fold homeobox protein, partial [Macaca
fascicularis]
Length = 117
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 25 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 68
>gi|332017590|gb|EGI58290.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 398
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 162 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 210
>gi|270011617|gb|EFA08065.1| hypothetical protein TcasGA2_TC005661 [Tribolium castaneum]
Length = 348
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 18/82 (21%)
Query: 38 NRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
N G SSG G + E AS K+RR RT F S+QLEELE+AF +HYPDVF
Sbjct: 135 NERGAGSSGEG------ADSESAAS----KRRRSRTNFNSWQLEELERAFLASHYPDVF- 183
Query: 98 STGSIAVFKPFLLMKLDLVKNR 119
+ L M+LDL ++R
Sbjct: 184 -------MREALAMRLDLKESR 198
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 36 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 86
>gi|345784350|ref|XP_852642.2| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Canis
lupus familiaris]
Length = 288
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|195380431|ref|XP_002048974.1| GJ21022 [Drosophila virilis]
gi|194143771|gb|EDW60167.1| GJ21022 [Drosophila virilis]
Length = 442
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 40 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
+G + G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 163 LGGGACSAGSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 219
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 52 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 102
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
GE +SE ED PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GEAKLSE---EDQ---PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|444513121|gb|ELV10274.1| ALX homeobox protein 1 [Tupaia chinensis]
Length = 181
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
GVP G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 109 GVPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 160
>gi|402589123|gb|EJW83055.1| hypothetical protein WUBG_06036 [Wuchereria bancrofti]
Length = 221
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
S+ KRK+RR+RT FT FQ++ELEKAF HYPD++ + L MK ++ +R +
Sbjct: 32 SISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDMYA--------REILAMKTEIAVDR-I 82
Query: 122 QTY 124
Q +
Sbjct: 83 QVW 85
>gi|444707558|gb|ELW48823.1| Homeobox protein aristaless-like 4 [Tupaia chinensis]
Length = 550
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
K K+RR RTTFTS+QLEELEK F +THYPDV+
Sbjct: 231 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVY 262
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 29 DSPSELSDLNRMGVPSSGRGEEDV-SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAF 87
D P + G P +G S G+ +D +RKQRR RTTFT QLE LE F
Sbjct: 34 DRPPPSAQRPHRGSPPAGAAPFGAHSAGDFDD--GFLRRKQRRNRTTFTLQQLEALEAVF 91
Query: 88 SRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
++THYPDVFT + L MK++L + R VQ +
Sbjct: 92 AQTHYPDVFT--------REELAMKINLTEAR-VQVW 119
>gi|324533481|gb|ADY49311.1| Paired mesoderm homeobox protein 2B [Ascaris suum]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QL+ELE+AF THYPD++T + + M++DL + R VQ +
Sbjct: 30 RRKQRRIRTTFTPGQLKELERAFLETHYPDIYT--------REDIAMRIDLTEAR-VQVW 80
>gi|431906966|gb|ELK11085.1| Retinal homeobox protein Rx [Pteropus alecto]
Length = 215
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 168 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 218
>gi|344250771|gb|EGW06875.1| Visual system homeobox 1 [Cricetulus griseus]
Length = 226
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QLEELEKAF HYPDV+ + L +K +L ++R +Q +
Sbjct: 21 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA--------REMLAVKTELPEDR-IQVW 71
>gi|291230022|ref|XP_002734969.1| PREDICTED: uncoordinated-4b-like [Saccoglossus kowalevskii]
Length = 307
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KQRR R ++++QLEELEKAF THYPD+F + L +KLDL++ R VQ +
Sbjct: 108 KQRRNRANYSAWQLEELEKAFQTTHYPDIF--------MREALALKLDLIEAR-VQVW 156
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
+RKQRR RTTFT QLEELE AF++THYPDVFT + L MK++L + R
Sbjct: 66 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFT--------REDLAMKINLTEAR 112
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 31 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 81
>gi|348576814|ref|XP_003474181.1| PREDICTED: retinal homeobox protein Rx-like [Cavia porcellus]
Length = 529
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GDAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
Length = 426
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 188 GGSSGDDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 238
>gi|410967992|ref|XP_003990497.1| PREDICTED: homeobox protein aristaless-like 3 [Felis catus]
Length = 372
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTF++FQLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 179 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 229
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 8/61 (13%)
Query: 39 RMGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEK-AFSRTHYPDVF 96
R P S G + SE + LP KRKQRR RTTFT+ QLEELE AF RTHYPD++
Sbjct: 47 RASAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELEHVAFERTHYPDIY 100
Query: 97 T 97
T
Sbjct: 101 T 101
>gi|322788828|gb|EFZ14396.1| hypothetical protein SINV_80377 [Solenopsis invicta]
Length = 294
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
RK RR RTTFT++QL ELEKAF T YPDVFT + L M+LDL + R
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFT--------REELAMRLDLSEAR 111
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 105
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|297275793|ref|XP_002801073.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Macaca mulatta]
gi|402903739|ref|XP_003914716.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Papio anubis]
Length = 230
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P G E S G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++
Sbjct: 51 PGEGPAAEGGSLGPGEEA---PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYS 102
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 49 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 99
>gi|338728121|ref|XP_001914967.2| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Equus caballus]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ++SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 119 GARELSEEEQ------PKKKHRRIRTTFTTYQLHELERAFEKSHYPDVYS 162
>gi|307189638|gb|EFN73976.1| Protein gooseberry [Camponotus floridanus]
Length = 574
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 53 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
S G+ D S P KRKQRR RTTFT QLE+LE AF RT YPDV+T
Sbjct: 169 SSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYT 217
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L M+ DL + R VQ +
Sbjct: 53 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLAMRTDLTEAR-VQVW 103
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 39 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 89
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 39 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 89
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 54 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 104
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 135 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 168
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 168 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 218
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 170 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 220
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 32 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 82
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 166
>gi|327278492|ref|XP_003223996.1| PREDICTED: pituitary homeobox 1-like [Anolis carolinensis]
Length = 166
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 24 HHSAEDSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEEL 83
+ ++E S +E+ D +R+GVP SG +G +D K+KQRR RT FTS QL+EL
Sbjct: 45 NSASESSDTEVPDKDRVGVPKSG------DDGAADDPTK--KKKQRRQRTHFTSQQLQEL 96
Query: 84 EKAFSRTHYPDVFTSTGSIAVF 105
E F R YPD+ + IAV+
Sbjct: 97 EATFQRNRYPDM-SMREEIAVW 117
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 56 EMEDYASLPK--RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKL 113
++ D LPK K+RR RTTF++FQLEELEK F +THYPDV+ L ++
Sbjct: 153 QLTDSMELPKSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQ--------LALRT 204
Query: 114 DLVKNRPVQTY 124
DL + R VQ +
Sbjct: 205 DLTEAR-VQVW 214
>gi|391342806|ref|XP_003745706.1| PREDICTED: uncharacterized protein LOC100900460 [Metaseiulus
occidentalis]
Length = 525
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+RR RT F +QLEELEKAF +HYPDVF + L M+LDL ++R VQ +
Sbjct: 120 KRRRTRTNFNGWQLEELEKAFEASHYPDVF--------MREALAMRLDLTESR-VQVW 168
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 20 GSYSHHSAE--DSPSELSDLNRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTS 77
GS S E DSP+ L+ G +S V + + S+P +K RRYRTTFT+
Sbjct: 102 GSISGDDCETLDSPT----LDNDGALTSDEVSPTVLDTYRQQALSMPSKK-RRYRTTFTT 156
Query: 78 FQLEELEKAFSRTHYPDVF 96
QL+ELE+ F+RTHYPD+F
Sbjct: 157 HQLDELERVFNRTHYPDIF 175
>gi|119393903|gb|ABL74454.1| Pax 3/7B [Helobdella sp. MS-2000]
Length = 444
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
RKQRR RTTFTS QLE LEK+F RTHYPDV+T
Sbjct: 383 RKQRRNRTTFTSDQLELLEKSFERTHYPDVYT 414
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|158164|gb|AAA28834.1| BSH4 encoded protein, partial [Drosophila melanogaster]
Length = 80
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 51 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
D+S+ E E L KRKQRR RTTFT+ QLE LE AFSRT YPDV+T
Sbjct: 5 DISDTESEPGIPL-KRKQRRSRTTFTAEQLEALEGAFSRTQYPDVYT 50
>gi|348580359|ref|XP_003475946.1| PREDICTED: ALX homeobox protein 1-like [Cavia porcellus]
Length = 353
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 7/58 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
S G+G + +GEM++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 132 SPGKGMPE--KGEMDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 187
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
K K+RR RTTF++FQLEELEK F +THYPDV+
Sbjct: 350 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVY 381
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 643 KRKQRRSRTTFTAQQLDELERAFERTQYPDIYT 675
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 166
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 124 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 157
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
E ED P +K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 45 EDEDPLRAPSKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 86
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 128 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 161
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 174 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 224
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 32 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 82
>gi|6469356|emb|CAA89259.1| Phox2 [Gallus gallus]
Length = 115
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
KRKQRR RTTF+S QL+ELE+ F+ THYPD++T + L +K+DL + R
Sbjct: 68 KRKQRRIRTTFSSAQLKELERVFAETHYPDIYT--------REELALKIDLTEAR 114
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTF++FQLEELEK F +THYPDV+ L ++ DL + R VQ +
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE--------QLALRTDLTEAR-VQVW 200
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 109 GIPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 160
>gi|46488694|gb|AAS99587.1| aristaless [Tribolium castaneum]
Length = 46
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 37/53 (69%), Gaps = 9/53 (16%)
Query: 72 RTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
RTTFTS+QLEELEKAFSRTHYPDVFT + L MK+ L + R +Q +
Sbjct: 1 RTTFTSYQLEELEKAFSRTHYPDVFT--------REELAMKIGLTEAR-IQVW 44
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 109 GIPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 160
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 35 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 85
>gi|16901485|gb|AAL30160.1| Rx/rax homeoprotein [Mus musculus]
Length = 181
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|260829653|ref|XP_002609776.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
gi|229295138|gb|EEN65786.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
Length = 184
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 11/79 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K+K RR RTTFT+FQL ELE+AF ++HYPDV++ L MK++L + V+
Sbjct: 2 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREE--------LAMKINLPE---VRVQ 50
Query: 125 VAYGTGRKKDLVYRRIEVE 143
V + R K +IE +
Sbjct: 51 VWFQNRRAKWRRQEKIEAQ 69
>gi|351706553|gb|EHB09472.1| ALX homeobox protein 1 [Heterocephalus glaber]
Length = 327
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 7/58 (12%)
Query: 44 SSGRGEEDVSEGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
S G+G + +GEM++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 106 SPGKGMPE--KGEMDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 161
>gi|195133672|ref|XP_002011263.1| GI16434 [Drosophila mojavensis]
gi|193907238|gb|EDW06105.1| GI16434 [Drosophila mojavensis]
Length = 614
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 19 TGSYSHHSAEDSPSELSDLN---------------------RMGVPSSGRGEEDVSE--G 55
+ S+ H A PS LSD G+ S G G +S+ G
Sbjct: 368 SSSHHHTPAHTPPSRLSDHTISAEGAFKKLKPEPNSGMSTVSAGITSPGSGISSLSQHAG 427
Query: 56 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
AS P +RR+RTTFT QL ELE AF+++HYPD++
Sbjct: 428 HTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIY 468
>gi|348509384|ref|XP_003442229.1| PREDICTED: visual system homeobox 2-like [Oreochromis niloticus]
Length = 269
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KQRR R ++S+QLEELEKAF THYPD+F + L ++LDL++ R VQ +
Sbjct: 99 KQRRARANYSSWQLEELEKAFETTHYPDIF--------MREALALRLDLIEAR-VQVW 147
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKP 107
G+ D +G+ D RK RR RTTFT+FQL +LE+AF +T YPDVFT +
Sbjct: 78 GDLDGMDGDPNDMNR--PRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFT--------RE 127
Query: 108 FLLMKLDLVKNRPVQTY 124
L M+LDL + R VQ +
Sbjct: 128 ELAMRLDLSEAR-VQVW 143
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTFTS+QLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 171 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 221
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 72 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 122
>gi|301778625|ref|XP_002924730.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ailuropoda melanoleuca]
Length = 278
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
Length = 213
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
KRKQRR RTTFT+ QL+ELE+AF RT YPD++T
Sbjct: 153 KRKQRRSRTTFTAQQLDELERAFERTQYPDIYT 185
>gi|109122933|ref|XP_001100945.1| PREDICTED: retina and anterior neural fold homeobox protein
2-like isoform 1 [Macaca mulatta]
gi|355702984|gb|EHH29475.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
mulatta]
gi|355755326|gb|EHH59073.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
fascicularis]
Length = 184
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 43 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
P G E S G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++
Sbjct: 5 PGEGPAAEGGSLGPGEE---APKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYS 56
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 169 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 202
>gi|195124303|ref|XP_002006633.1| GI21167 [Drosophila mojavensis]
gi|193911701|gb|EDW10568.1| GI21167 [Drosophila mojavensis]
Length = 437
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 172 GSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 220
>gi|70571424|dbj|BAE06744.1| transcription factor protein [Ciona intestinalis]
Length = 228
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
Query: 58 EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVK 117
+D A + K+RR RT F+++QLEELEKAF +HYPDV+ + L ++LDLV+
Sbjct: 123 DDSAENQQNKRRRTRTNFSTWQLEELEKAFGDSHYPDVY--------MREALALRLDLVE 174
Query: 118 NRPVQTY 124
+R VQ +
Sbjct: 175 SR-VQVW 180
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|240952118|ref|XP_002399309.1| hypothetical protein IscW_ISCW016208 [Ixodes scapularis]
gi|215490516|gb|EEC00159.1| hypothetical protein IscW_ISCW016208 [Ixodes scapularis]
Length = 161
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 8/53 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNR 119
K+RR RT F +QLEELEKAF +HYPDVF + L M+LDL+++R
Sbjct: 52 KRRRTRTNFNGWQLEELEKAFEASHYPDVF--------MREALAMRLDLIESR 96
>gi|401712698|gb|AFP99082.1| Alx1, partial [Ophiocoma wendtii]
Length = 79
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 20/82 (24%)
Query: 38 NRMGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
N PS G E + S +K+RR RTTFTSFQLEE+EK F +THYPDV+
Sbjct: 9 NNNNYPSPGSTESESS------------KKKRRNRTTFTSFQLEEMEKIFQKTHYPDVYC 56
Query: 98 STGSIAVFKPFLLMKLDLVKNR 119
+ L ++ DL + R
Sbjct: 57 --------REQLALRCDLTEAR 70
>gi|47228865|emb|CAG09380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 9/62 (14%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ
Sbjct: 23 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQCQ 73
Query: 125 VA 126
A
Sbjct: 74 WA 75
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 166
>gi|312072725|ref|XP_003139196.1| hypothetical protein LOAG_03611 [Loa loa]
gi|307765638|gb|EFO24872.1| hypothetical protein LOAG_03611 [Loa loa]
Length = 237
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 9/63 (14%)
Query: 62 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPV 121
++ KRK+RR+RT FT FQ++ELEKAF HYPD++ + L MK ++ +R +
Sbjct: 32 TISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDIYA--------RELLAMKTEIAVDR-I 82
Query: 122 QTY 124
Q +
Sbjct: 83 QVW 85
>gi|350583559|ref|XP_003125909.3| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 448
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTF++FQLEELEK F +THYPDV+ + L ++ DL + R VQ +
Sbjct: 255 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYA--------REQLALRTDLTEAR-VQVW 305
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 21 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 71
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTF++FQLEELEK F +THYPDV+ L ++ DL + R VQ +
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE--------QLALRTDLTEAR-VQVW 200
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|345780690|ref|XP_539704.3| PREDICTED: ALX homeobox protein 1 [Canis lupus familiaris]
Length = 265
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 6/57 (10%)
Query: 41 GVPSSGRGEEDVSE-GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
G+P G D+ E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 48 GMPEKG----DLDELGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 99
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 166
>gi|84874540|gb|ABC68267.1| transcription factor Pax3/7 [Capitella teleta]
Length = 416
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 66 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
RKQRR RTTF++ QLE LEKAF RTHYPD++T
Sbjct: 187 RKQRRSRTTFSADQLEHLEKAFDRTHYPDIYT 218
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 19 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 69
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 39 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 89
>gi|66571172|gb|AAY51551.1| IP01408p [Drosophila melanogaster]
gi|220943358|gb|ACL84222.1| CG3388-PA [synthetic construct]
Length = 427
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 166 GSEDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214
>gi|16901484|gb|AAL30159.1| Rx/rax homeoprotein [Mus musculus]
Length = 172
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 123 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 156
>gi|17647491|ref|NP_523863.1| gooseberry [Drosophila melanogaster]
gi|123376|sp|P09082.1|GSB_DROME RecName: Full=Protein gooseberry; AltName: Full=BSH9; AltName:
Full=Protein gooseberry distal
gi|10727095|gb|AAF47315.2| gooseberry [Drosophila melanogaster]
gi|212287970|gb|ACJ23460.1| FI07617p [Drosophila melanogaster]
Length = 427
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+T
Sbjct: 166 GSEDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYT 214
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens mutus]
Length = 257
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 24 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 74
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
K K+RR RTTF++FQLEELEK F +THYPDV+ L ++ DL + R VQ +
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE--------QLALRTDLTEAR-VQVW 200
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 19/96 (19%)
Query: 46 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVF 105
G G +D EG ++ + K+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 532 GSGSDD--EGGDDNCS---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS-------- 578
Query: 106 KPFLLMKLDLVKNRPVQTYVAYGTGRKKDLVYRRIE 141
+ L MK++L + V+ V + R K +RR E
Sbjct: 579 REELAMKVNLPE---VRVQVWFQNRRAK---WRRQE 608
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|351699331|gb|EHB02250.1| Retinal homeobox protein Rx, partial [Heterocephalus glaber]
Length = 211
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GDAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|148230462|ref|NP_001090191.1| visual system homeobox 1 [Xenopus laevis]
gi|123905790|sp|Q0P031.1|VSX1_XENLA RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor vsx1; AltName: Full=Xvsx1
gi|84104901|gb|ABC54559.1| visual system homeobox 1 protein [Xenopus laevis]
Length = 344
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KRK+RR+RT FT+ QL+ELEK+F+ HYPDV+ + L +K +L ++R +Q +
Sbjct: 147 KRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYA--------REMLALKTELPEDR-IQVW 197
Query: 125 VAY--GTGRKKDLVYRRIEVEIKF 146
RK++ + R V ++
Sbjct: 198 FQNRRAKWRKREKCWGRSSVMAEY 221
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
Query: 48 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 122 GDAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 165
>gi|344250397|gb|EGW06501.1| Retinal homeobox protein Rx [Cricetulus griseus]
Length = 197
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 114 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 147
>gi|301782565|ref|XP_002926696.1| PREDICTED: ALX homeobox protein 1-like [Ailuropoda melanoleuca]
gi|281346099|gb|EFB21683.1| hypothetical protein PANDA_016388 [Ailuropoda melanoleuca]
Length = 326
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 6/57 (10%)
Query: 41 GVPSSGRGEEDVSE-GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 96
G+P G D+ E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+
Sbjct: 109 GMPEKG----DLDELGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY 160
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 41 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
G+PS G +V E E PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 113 GLPS-GPATSEVKLSEEEQ----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 164
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 30/34 (88%)
Query: 64 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 97
PK+K RR RTTFT++QL ELE+AF ++HYPDV++
Sbjct: 34 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYS 67
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 65 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
+RKQRR RTTFT QLE LE F++THYPDVFT + L MK++L + R VQ +
Sbjct: 30 RRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFT--------REELAMKINLTEAR-VQVW 80
>gi|410902847|ref|XP_003964905.1| PREDICTED: retinal homeobox protein Rx-like [Takifugu rubripes]
Length = 264
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 9/58 (15%)
Query: 67 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSTGSIAVFKPFLLMKLDLVKNRPVQTY 124
KQRR R ++S+QLEELEKAF THYPD+F + L ++LDL++ R VQ +
Sbjct: 85 KQRRARANYSSWQLEELEKAFETTHYPDIF--------MREALAVRLDLIEAR-VQVW 133
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,453,998,810
Number of Sequences: 23463169
Number of extensions: 100052807
Number of successful extensions: 246919
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3609
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 243041
Number of HSP's gapped (non-prelim): 4042
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)