BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3735
(91 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+GE ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 69 SDGEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 113
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E++DYA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 57 SDCEVDDYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 101
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 27 SEAEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 71
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 6/60 (10%)
Query: 5 SSGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 59 ASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 144 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 188
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE +++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 150 SEADVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 194
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 6/60 (10%)
Query: 5 SSGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 59 ASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 6/60 (10%)
Query: 5 SSGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 59 ASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 26 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 70
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 6/60 (10%)
Query: 5 SSGRGEEDVSEG----EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+SG VS+G E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 59 ASGGTNSPVSDGNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 44/47 (93%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E++D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 26 SETEVDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 70
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Query: 6 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S ++ SE E++++A PKRKQRRYRTTFTSFQLEELEKAF+RTHYPDVFTR+
Sbjct: 123 SSNASDNNSECELDEFA--PKRKQRRYRTTFTSFQLEELEKAFARTHYPDVFTRE 175
>gi|332029859|gb|EGI69728.1| Homeobox protein aristaless [Acromyrmex echinatior]
Length = 248
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 42/46 (91%), Gaps = 2/46 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
SE E +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR
Sbjct: 150 SEAEADDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 193
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%), Gaps = 2/55 (3%)
Query: 6 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S + + EGE++++A PKRKQRRYRTTFTSFQLEELEKAF+RTHYPDVFTR+
Sbjct: 79 SNASDHNSEEGELDEFA--PKRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFTRE 131
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 48/65 (73%), Gaps = 8/65 (12%)
Query: 2 GVPSSGRG------EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 55
VPS G + S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPD
Sbjct: 41 AVPSGASGGTNSPISDPNSDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 98
Query: 56 VFTRQ 60
VFTR+
Sbjct: 99 VFTRE 103
>gi|322780040|gb|EFZ09800.1| hypothetical protein SINV_11608 [Solenopsis invicta]
Length = 130
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 42/46 (91%), Gaps = 2/46 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
SE E +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR
Sbjct: 87 SEAEADDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 130
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 72 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 116
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 56 SDCETDEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 100
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%), Gaps = 2/51 (3%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D SE E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFTR+
Sbjct: 79 QSDGSEAETDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTRE 127
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 59 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 103
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 78 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 122
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 70 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 114
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E ++YA PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 70 SDCEADEYA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 114
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFTR+
Sbjct: 74 GPDNSDGSDPEPDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTRE 125
>gi|170052026|ref|XP_001862034.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872990|gb|EDS36373.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 219
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%), Gaps = 2/57 (3%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S ++ +G ++++ PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 116 PNSPMSDQHSDDGGVDEFQ--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 170
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 47/59 (79%), Gaps = 3/59 (5%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G P+S + +G +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 55 GDPNSPLSDPHSDDGG-DDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 110
>gi|270008150|gb|EFA04598.1| aristaless [Tribolium castaneum]
Length = 182
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%), Gaps = 2/54 (3%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E +++A PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFTR+
Sbjct: 46 GPDNSDGSDPEPDEFA--PKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTRE 97
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 45/57 (78%), Gaps = 6/57 (10%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G + D + +D+A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 107 PPPGSADSD----DPDDFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 157
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 6/57 (10%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G + D + +++A PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 30 PPPGSADSD----DADEFA--PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 80
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 193 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 228
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/34 (100%), Positives = 34/34 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 58
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT
Sbjct: 78 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 111
>gi|241254920|ref|XP_002404118.1| homeobox protein arx, putative [Ixodes scapularis]
gi|215496594|gb|EEC06234.1| homeobox protein arx, putative [Ixodes scapularis]
Length = 206
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
S EM D PKRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFTR
Sbjct: 163 SPQEMTD--DFPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTR 206
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 43 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 78
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/36 (94%), Positives = 36/36 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 71 PRRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 106
>gi|290789888|pdb|3A01|B Chain B, Crystal Structure Of Aristaless And Clawless
Homeodomains Bo
gi|290789892|pdb|3A01|F Chain F, Crystal Structure Of Aristaless And Clawless
Homeodomains Bo
Length = 67
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 2 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 37
>gi|156356366|ref|XP_001623896.1| predicted protein [Nematostella vectensis]
gi|156210636|gb|EDO31796.1| predicted protein [Nematostella vectensis]
Length = 93
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
S E+E S KRKQRRYRTTFTS+QLEELE+AF++THYPDVFTR+
Sbjct: 16 SNNELEGKDSTAKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREA 63
>gi|389614437|dbj|BAM20266.1| aristaless, partial [Papilio xuthus]
Length = 80
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 4 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRE 39
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 6/61 (9%)
Query: 6 SGRGEEDVSEGEMEDYASLP------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
+G G++ ++ E + Y P KRKQRRYRTTFTS+QL+ELEKAF RTHYPDVFTR
Sbjct: 205 AGGGQDASADNEDDCYGGPPSAGGTNKRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTR 264
Query: 60 Q 60
+
Sbjct: 265 E 265
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 9/57 (15%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P SG G +D ED +P+RKQRRYRTTFTS+QL+ELEKAF RTHYPDVFTR+
Sbjct: 22 PGSGSGVDD------ED---IPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTRE 69
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 9/57 (15%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P SG G +D ED +P+RKQRRYRTTFTS+QL+ELEKAF RTHYPDVFTR+
Sbjct: 22 PGSGSGMDD------ED---IPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTRE 69
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 1 MGVPSSGRGEED---VSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 57
+ P + +ED +S+G+ D + KRKQRRYRTTFTSFQLEELE+AF +THYPDVF
Sbjct: 169 IQAPKEVKVQEDNLSISDGD-GDLDEMGKRKQRRYRTTFTSFQLEELERAFQKTHYPDVF 227
Query: 58 TRQ 60
TR+
Sbjct: 228 TRE 230
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%), Gaps = 3/43 (6%)
Query: 18 MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++D+ PKRKQRRYRTTFTS+QLEELEKAF +THYPDVFTR+
Sbjct: 46 LDDF---PKRKQRRYRTTFTSYQLEELEKAFGKTHYPDVFTRE 85
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 20 DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D +P+RKQRRYRTTFTS+QL+ELEKAF RTHYPDVFTR+
Sbjct: 3 DDEDIPRRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTRE 43
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 2 GVPSSGRGEEDV-SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G P R D+ + ++EDY KRKQRRYRTTFTSFQLEELE+AF +THYPDVF R+
Sbjct: 92 GSPIDFRSSADLYGDRDIEDYG---KRKQRRYRTTFTSFQLEELERAFQKTHYPDVFMRE 148
>gi|321473819|gb|EFX84785.1| hypothetical protein DAPPUDRAFT_36325 [Daphnia pulex]
Length = 64
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/35 (94%), Positives = 35/35 (100%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELEKAFSRTHYPDVFTR+
Sbjct: 1 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTRE 35
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 35/35 (100%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF++THYPDVFTR+
Sbjct: 176 KRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTRE 210
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
Query: 9 GEEDV--SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GEE V S G + L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 271 GEESVCLSAGSDSEEGML-KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 323
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
Query: 9 GEEDV--SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GEE V S G + L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 254 GEESVCLSAGSDSEEGLL-KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 306
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ P + R +++ + + L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 50 LPAPLASRADQEKAVQGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 109
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 393 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 427
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 8/60 (13%)
Query: 9 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 194 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 253
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 8/60 (13%)
Query: 9 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 193 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 252
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 8/60 (13%)
Query: 9 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 194 GDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 253
>gi|355757247|gb|EHH60772.1| Aristaless-related homeobox [Macaca fascicularis]
Length = 290
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 145 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 181
>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
Length = 360
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFTR+
Sbjct: 116 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTRE 150
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 9 GEEDVSEGEMEDYA-SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE+ V D L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 209 GEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 261
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 298 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 332
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 329 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 363
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFTR+
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTRE 148
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 325 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 359
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F+RTHYPDVFTR+
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTRE 148
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 288 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 322
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 325 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 359
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 290 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 324
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 8/60 (13%)
Query: 9 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 193 GDGDVRDGEDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 252
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 337 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 371
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 290 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 324
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 240 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 274
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 327 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 361
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 333 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 367
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 190 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 226
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 187 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 221
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 141 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 177
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 215 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 251
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 9 GEEDVSEGEMEDYA-SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE+ V D L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 254 GEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 306
>gi|345317707|ref|XP_001510573.2| PREDICTED: homeobox protein ARX-like, partial [Ornithorhynchus
anatinus]
Length = 159
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 35/38 (92%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 108 GLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 145
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 9 GEEDVSEGEMEDYA-SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE+ V D L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 123 GEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 175
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 9 GEEDVSEGEMEDYA-SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE+ V D L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 264 GEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 316
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFTR+
Sbjct: 187 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTRE 221
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 212 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 246
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 9 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 45
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFTR+
Sbjct: 170 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTRE 204
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F RTHYPDVFTR+
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTRE 148
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 49 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 85
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 209 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTRE 243
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 8/61 (13%)
Query: 9 GEEDVSEGE--------MEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ DV +GE + + KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 193 GDGDVRDGEDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTSV 252
Query: 61 C 61
C
Sbjct: 253 C 253
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 266 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 300
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 159 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 193
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 181 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTRE 215
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F RTHYPDVFTR+
Sbjct: 105 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTRE 139
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQL+ELEK F RTHYPDVFTR+
Sbjct: 105 KRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTRE 139
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 212 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 246
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 209 KRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTRE 243
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFTR+
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTRE 241
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFTR+
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTRE 241
>gi|431895109|gb|ELK04900.1| Aristaless-related homeobox protein [Pteropus alecto]
Length = 264
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFTR
Sbjct: 156 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTR 191
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQLEELE+AF +THYPDVFTR+
Sbjct: 217 KRKQRRYRTTFSAFQLEELERAFQKTHYPDVFTRE 251
>gi|334329497|ref|XP_003341233.1| PREDICTED: homeobox protein ARX-like [Monodelphis domestica]
Length = 562
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 38/50 (76%), Gaps = 6/50 (12%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT------RQCGRFSRQRS 69
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT + GR S R+
Sbjct: 319 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTSLTRFFQNAGRGSMHRA 368
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 34/35 (97%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELEK F+RTHYPDVFTR+
Sbjct: 186 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTRE 220
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Query: 5 SSGRGEEDV-SEGEMED---YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++G+G +DV S G+ +D S KRK+RR RTTFTS+QLEE+EK F RTHYPDV+ R+
Sbjct: 89 ANGKGNDDVKSPGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCRE 148
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Query: 5 SSGRGEEDV-SEGEMED---YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++G+G +DV S G+ +D S KRK+RR RTTFTS+QLEE+EK F RTHYPDV+ R+
Sbjct: 172 ANGKGNDDVKSPGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCRE 231
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 33/34 (97%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RKQRRYRTTFTS+QLEELE+AF +THYPDVFTR+
Sbjct: 103 RKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE 136
>gi|6136895|dbj|BAA85852.1| Arx homeodomain protein [Mus musculus]
Length = 562
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT +
Sbjct: 327 KRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTEE 361
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+K+RRYRTTFTSFQL ELEKAF RTHYPDVFTR+
Sbjct: 80 KKKRRYRTTFTSFQLRELEKAFERTHYPDVFTRE 113
>gi|443683114|gb|ELT87482.1| hypothetical protein CAPTEDRAFT_113148 [Capitella teleta]
Length = 54
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QLEELEKAF +THYPDVF R+
Sbjct: 2 KRKQRRYRTTFTSYQLEELEKAFQKTHYPDVFCRE 36
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 2 GVPSSGRGEED-VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 58
G P RG + + EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++T
Sbjct: 24 GSPGELRGPGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYT 83
Query: 59 RQ 60
R+
Sbjct: 84 RE 85
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 195 LGDRSPGNRTDDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 253
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 4 PSSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PS + D S G + ++ S KRKQRRYRTTFT+FQLEELE +F +THYPDVF R+
Sbjct: 47 PSDRCDDNDQSSGSLSTDQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTHYPDVFFRE 106
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 LGDRSPGNRTDDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 262
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF R+
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFRE 125
>gi|449282367|gb|EMC89211.1| Homeobox protein ARX, partial [Columba livia]
Length = 45
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 58
L KRKQRRYRTTFTS+QLEELE+AF +THYPDVFT
Sbjct: 11 LLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT 45
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF R+
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFRE 125
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF R+
Sbjct: 91 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFRE 125
>gi|307175916|gb|EFN65729.1| Homeobox protein ARX [Camponotus floridanus]
Length = 249
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 37/47 (78%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF R+
Sbjct: 82 SESEERPSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFRE 128
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT+FQLEELE+AF +THYPDVF R+
Sbjct: 93 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFRE 127
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 192 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 242
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 199 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 205 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 254
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 198 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 196 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 198 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 210 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 260
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 210 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 260
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 196 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 192 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 242
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 205 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 255
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 209 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 IDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|157137459|ref|XP_001663998.1| hypothetical protein AaeL_AAEL013809 [Aedes aegypti]
gi|108869695|gb|EAT33920.1| AAEL013809-PA [Aedes aegypti]
Length = 358
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFRE 36
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 209 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|195035409|ref|XP_001989170.1| GH10195 [Drosophila grimshawi]
gi|193905170|gb|EDW04037.1| GH10195 [Drosophila grimshawi]
Length = 636
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
EED+S+ E E +L KRKQRR RTTF++ QLEELE+AF RT YPD+FTR+
Sbjct: 186 EEDLSDCESEPGIAL-KRKQRRCRTTFSASQLEELERAFERTQYPDIFTRE 235
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 205 DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 255
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 196 LGDKSPGSRTDDGSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 254
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 7 GRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 199 GPGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 253
>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
Length = 510
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++VS+ E E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 206 DEVSDVESEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 254
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G S G +D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 203 LGDKSPGSRTDDGSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 261
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 7 GRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 GPGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 261
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 8 RGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 198 KGNRTDESSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 3 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 47
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
Query: 9 GEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE+ GE D S P KRKQRR RTTFT QLEELEKAF RTHYPD++TR+
Sbjct: 170 GEKGGCRGEDSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTRE 225
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 5 SSGRGEEDVSE--GEMED---YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
++G+G +DV G+ +D S KRK+RR RTTFTS+QLEE+EK F RTHYPDV+ R
Sbjct: 89 ANGKGSDDVKSPMGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCR 148
Query: 60 Q 60
+
Sbjct: 149 E 149
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 512 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 556
>gi|307195645|gb|EFN77487.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 271
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQLEELE+AF +THYPDVF R+
Sbjct: 93 KRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFRE 127
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 12 DVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 198 DDGASDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|345314187|ref|XP_003429473.1| PREDICTED: paired box protein Pax-7-like, partial
[Ornithorhynchus anatinus]
Length = 84
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 9 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 53
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT FQL+ELE+AF +THYPDVF R+
Sbjct: 47 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMRE 81
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 6 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G ED S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 188 AGSTVEDSSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 241
>gi|322800741|gb|EFZ21645.1| hypothetical protein SINV_12341 [Solenopsis invicta]
Length = 247
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E E + KRKQRRYRTTF++FQLEELE+AF +THYPDVF R+
Sbjct: 80 ENEERSSCVIGKRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFRE 125
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 6 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G ED S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 190 AGSTVEDSSDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 243
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 13 VSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++TR+
Sbjct: 186 IKEDELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTRE 233
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G +SG ++ S+ E E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 189 LGDKASGNRLDEGSDVESEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 217 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 261
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++TR+
Sbjct: 144 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTRE 197
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ++VS+ E E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 200 GSQADEVSDVESEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 252
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++TR+
Sbjct: 144 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTRE 197
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 220 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 264
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|170033842|ref|XP_001844785.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874862|gb|EDS38245.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFRE 36
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 220 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 264
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 206 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 250
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 EVESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 177 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 221
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 196 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 240
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 185 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 229
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 203 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 335 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 379
>gi|332017817|gb|EGI58478.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 248
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF++FQLEELE+AF +THYPDVF R+
Sbjct: 93 KRKQRRYRTTFSNFQLEELERAFQKTHYPDVFFRE 127
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 219 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 263
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 221 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 265
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 203 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 247
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 206 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 250
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 214 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 258
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ++ SE E ED +LP KRKQRR RTTF++ QL+ELEK F RTHYPD++TR+
Sbjct: 168 GSDEKSENSEDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTRE 221
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris
gallopavo]
Length = 330
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 3 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 52
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFT FQL+ELE+AF +THYPDVF R+
Sbjct: 18 KRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMRE 52
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 197 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 241
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 3 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 52
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|122892559|gb|ABM67330.1| PAX7 [Hylobates klossii]
Length = 111
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 48 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 97
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 186 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 230
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 191 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 235
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 204 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 248
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 327 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 371
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 209 EVESEPDLPPKRKQRRSRTTFTADQLEELERAFERTHYPDIYTRE 253
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 215 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 259
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 200 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 244
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 136 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 180
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 198 DDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
Length = 300
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 205 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 249
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 336 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 380
>gi|281333979|gb|ADA61179.1| paired box 7 [Meleagris gallopavo]
Length = 520
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
Length = 619
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+E+VS+ E E +L KRKQRR RTTF++ QLEELE+AF RT YPD+FTR+
Sbjct: 192 DEEVSDCESEPGIAL-KRKQRRCRTTFSAAQLEELERAFERTQYPDIFTRE 241
>gi|326674430|ref|XP_001919624.3| PREDICTED: paired box protein Pax-3 [Danio rerio]
Length = 653
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 212 EVESEPDLPLKRKQRRSRTTFTADQLEELERAFERTHYPDIYTRE 256
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D S+ + E L KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 212 DDASDVDSEPDLPL-KRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 260
>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
castaneum]
gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
Length = 220
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 19 EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D + KRKQRRYRTTF+++QLEELE+AF +THYPDVF R+
Sbjct: 36 DDANNASKRKQRRYRTTFSNYQLEELERAFHKTHYPDVFFRE 77
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 3 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 52
>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
Length = 280
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 207 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 251
>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
Length = 275
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
Length = 614
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 192 DEDISDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPDIYTRE 241
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 7/58 (12%)
Query: 10 EEDVSEGEMEDYA------SLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+ VS+G+ D + +P KRKQRR RTTFT+ QL+ELEKAF RT YPD++TR+
Sbjct: 167 EKKVSDGKTSDGSDCDSEPGIPLKRKQRRSRTTFTALQLDELEKAFERTQYPDIYTRE 224
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 147 DIDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 191
>gi|312382759|gb|EFR28101.1| hypothetical protein AND_04364 [Anopheles darlingi]
Length = 158
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF S QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNSMQLQELERAFQRTHYPDVFFRE 36
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E D + KRK+RR RTTFTSFQL+E+EK F RTHYPDV++R+
Sbjct: 93 EQSDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSRE 136
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 41
>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
Length = 590
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 172 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 221
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ G D S+ + E L KRKQRR RTTFT QLEELEKAF RTHYPD++TR+
Sbjct: 163 GILGEKNGPGDSSDCDSEPDLPL-KRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTRE 220
>gi|224080279|ref|XP_002189321.1| PREDICTED: paired box protein Pax-7-like, partial [Taeniopygia
guttata]
gi|327292272|ref|XP_003230844.1| PREDICTED: paired box protein Pax-7-like, partial [Anolis
carolinensis]
gi|120974931|gb|ABM46764.1| PAX7 [Gorilla gorilla]
gi|121484047|gb|ABM54349.1| PAX7 [Pan paniscus]
gi|339791146|gb|AEK12234.1| transcription factor pax7 [Bos taurus]
gi|339791148|gb|AEK12235.1| transcription factor pax7 [Bos taurus]
Length = 66
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 3 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 52
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ G D S+ + E L KRKQRR RTTFT QLEELEKAF RTHYPD++TR+
Sbjct: 163 GILGEKNGPGDSSDCDSEPDLPL-KRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTRE 220
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 41
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Query: 13 VSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ EG ++E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 70 LDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 119
>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
Length = 613
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 195 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 244
>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
Length = 613
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 195 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 244
>gi|42601333|gb|AAS21360.1| aristaless related homeobox protein [Oikopleura dioica]
Length = 293
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
A+ +RKQRR+RTTF+++QLEELE F RTHYPDVFTR+
Sbjct: 119 AAESRRKQRRFRTTFSAYQLEELENTFVRTHYPDVFTRE 157
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 41
>gi|313224351|emb|CBY20140.1| unnamed protein product [Oikopleura dioica]
Length = 291
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
A+ +RKQRR+RTTF+++QLEELE F RTHYPDVFTR+
Sbjct: 119 AAESRRKQRRFRTTFSAYQLEELENTFVRTHYPDVFTRE 157
>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
Length = 613
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 195 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 244
>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
Length = 612
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 195 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 244
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|295321888|pdb|3LNQ|A Chain A, Structure Of Aristaless Homeodomain In Complex With Dna
Length = 58
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/30 (96%), Positives = 30/30 (100%)
Query: 31 RYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RYRTTFTSFQLEELEKAFSRTHYPDVFTR+
Sbjct: 1 RYRTTFTSFQLEELEKAFSRTHYPDVFTRE 30
>gi|395512821|ref|XP_003760632.1| PREDICTED: retinal homeobox protein Rx1-like [Sarcophilus
harrisii]
Length = 208
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
G P+ GR GE ED PK+K RR RTTFT+FQL +LE+AF R+HYPDV++R+
Sbjct: 8 GEPAEGRAP---GSGEAEDA---PKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSRE- 60
Query: 62 GRFSRQRSMPGELCVAW 78
+ Q ++P W
Sbjct: 61 -ELATQVNLPEVRVQVW 76
>gi|195066771|ref|XP_001996841.1| GH11036 [Drosophila grimshawi]
gi|193891514|gb|EDV90380.1| GH11036 [Drosophila grimshawi]
Length = 372
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|195032847|ref|XP_001988573.1| GH11236 [Drosophila grimshawi]
gi|193904573|gb|EDW03440.1| GH11236 [Drosophila grimshawi]
Length = 372
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
Length = 614
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 195 DEDISDCESEPGIAL-KRKQRRCRTTFSASQLDELERAFERTQYPDIYTRE 244
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 208 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 252
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+ R D S E +A+ K+K+RR RTTFTSFQLEE+E+ F +THYPDV+ R+
Sbjct: 87 PNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMRE 143
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+ R D S E +A+ K+K+RR RTTFTSFQLEE+E+ F +THYPDV+ R+
Sbjct: 87 PNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMRE 143
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
Length = 613
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 196 DEDISDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPDIYTRE 245
>gi|325980252|gb|ADZ48385.1| Pax3 [Polyodon spathula]
Length = 285
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 111 DIESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 155
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D S+ + E L KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 160 DDTSDVDSEPGLPL-KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 208
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+ R D S E +A+ K+K+RR RTTFTSFQLEE+E+ F +THYPDV+ R+
Sbjct: 87 PNRDRDAADDSSEESSTHAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMRE 143
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 205 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 249
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 211 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 255
>gi|195470310|ref|XP_002087451.1| GE16946 [Drosophila yakuba]
gi|194173552|gb|EDW87163.1| GE16946 [Drosophila yakuba]
Length = 353
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|56714085|gb|AAW24013.1| homeodomain protein Pax37a, partial [Oikopleura dioica]
Length = 440
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++TR+
Sbjct: 176 EDELDESVRPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTRE 221
>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
Length = 850
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 18 MEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+E LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 169 VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 212
>gi|410927106|ref|XP_003977007.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
rubripes]
Length = 66
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Query: 16 GEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+ D S P KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 4 DEVSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 52
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 202 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
>gi|24762822|ref|NP_523862.1| gooseberry-neuro [Drosophila melanogaster]
gi|27923971|sp|P09083.2|GSBN_DROME RecName: Full=Protein gooseberry-neuro; AltName: Full=BSH4;
AltName: Full=Protein gooseberry proximal
gi|7291896|gb|AAF47314.1| gooseberry-neuro [Drosophila melanogaster]
gi|17946362|gb|AAL49215.1| RE64348p [Drosophila melanogaster]
gi|220945952|gb|ACL85519.1| gsb-n-PA [synthetic construct]
gi|220952700|gb|ACL88893.1| gsb-n-PA [synthetic construct]
Length = 449
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|195437558|ref|XP_002066707.1| GK24418 [Drosophila willistoni]
gi|194162792|gb|EDW77693.1| GK24418 [Drosophila willistoni]
Length = 364
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 243 DVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 287
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E G + D A+ KRK+RR RTTFTSFQLEE+EK F +THYPDV+ R+
Sbjct: 89 EGALNGSLGDDANA-KRKKRRNRTTFTSFQLEEMEKVFQKTHYPDVYCRE 137
>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
Length = 835
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
Length = 836
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|82395408|gb|ABB72468.1| NVHD100-paired class homeobox protein [Nematostella vectensis]
gi|110339227|gb|ABG67877.1| ARX, partial [Nematostella vectensis]
Length = 60
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 29 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
QRRYRTTFTS+QLEELE+AF++THYPDVFTR+
Sbjct: 1 QRRYRTTFTSYQLEELERAFAKTHYPDVFTREA 33
>gi|194758607|ref|XP_001961553.1| GF15026 [Drosophila ananassae]
gi|190615250|gb|EDV30774.1| GF15026 [Drosophila ananassae]
Length = 325
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF + QL+ELE+AF RTHYPDVF R+
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFRE 36
>gi|67968091|dbj|BAE00526.1| unnamed protein product [Macaca fascicularis]
Length = 246
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
MG S+ + +E +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR
Sbjct: 20 MGKASAPQSDEG---SDIDSEPDLPLKRKQRRNRTTFTAEQLEELERAFERTHYPDIYTR 76
Query: 60 Q 60
+
Sbjct: 77 E 77
>gi|195489906|ref|XP_002092936.1| GE11387 [Drosophila yakuba]
gi|194179037|gb|EDW92648.1| GE11387 [Drosophila yakuba]
Length = 449
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E D + KRK+RR RTTFTSFQL+E+EK F RTHYPDV++R+
Sbjct: 93 EQSDTSDSSKRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSRE 136
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 4/51 (7%)
Query: 14 SEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SE E D S P KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 214 SEDEESDCDSEPGLSVKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 264
>gi|301508010|gb|ADK77973.1| aristaless-related homeobox protein [Macropus eugenii]
Length = 552
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTFTS+QL ELE+AF +TH PDVFTR+
Sbjct: 315 KRKQRRYRTTFTSYQLLELERAFQKTHCPDVFTRE 349
>gi|195353358|ref|XP_002043172.1| GM11765 [Drosophila sechellia]
gi|195586619|ref|XP_002083071.1| GD24898 [Drosophila simulans]
gi|194127260|gb|EDW49303.1| GM11765 [Drosophila sechellia]
gi|194195080|gb|EDX08656.1| GD24898 [Drosophila simulans]
Length = 449
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 173 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 228
>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
laevis]
Length = 461
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 173 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 228
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 172 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 227
>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
Length = 617
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++VS+ E E +L KRKQRR RTTF++ QLEELE+AF RT YPD+FTR+
Sbjct: 185 DDEVSDCESEPGIAL-KRKQRRCRTTFSAAQLEELERAFERTQYPDIFTRE 234
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 171 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 226
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S PKRK+RR RTTFT++QLEE+E+ F +THYPDV+TR+
Sbjct: 8 SAPKRKKRRNRTTFTAYQLEEMERVFQKTHYPDVYTRE 45
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E E+++ KRKQRR RTTFT+ QLEELEK F RTHYPD++TR+
Sbjct: 223 EEELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTRE 268
>gi|194886957|ref|XP_001976718.1| GG19864 [Drosophila erecta]
gi|190659905|gb|EDV57118.1| GG19864 [Drosophila erecta]
Length = 453
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
Full=Paired-domain transcription factor Pax3-B
Length = 483
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 195 APASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 112 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFGRTHYPDIYTRE 156
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 5 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S G + S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 107 SPGLSTSNNSDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 162
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++G E D + + + LP KRKQRR RTTF++ QLEELE+ F RTHYPD++TR+
Sbjct: 168 ATGEREADEGDSDCDSEPELPLKRKQRRSRTTFSADQLEELERCFERTHYPDIYTRE 224
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ G D S+ + E L KRKQRR RTTFT QL+ELEKAF RTHYPD++TR+
Sbjct: 70 GILGEKNGPGDSSDCDSEPDLPL-KRKQRRSRTTFTPEQLDELEKAFERTHYPDIYTRE 127
>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
Length = 268
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Query: 4 PSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 196 PASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D S G + + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 128 DDSMGNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 176
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|47203313|emb|CAF94225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Query: 23 SLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 15 DLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 53
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ E LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 247 DFESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 291
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|195124301|ref|XP_002006632.1| GI18478 [Drosophila mojavensis]
gi|193911700|gb|EDW10567.1| GI18478 [Drosophila mojavensis]
Length = 464
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 403
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
Length = 319
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 176 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 220
>gi|49523081|gb|AAH75577.1| paired box 3 [Xenopus (Silurana) tropicalis]
Length = 254
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Query: 4 PSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P+S EE +++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 197 PASPESEEG---SDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 204 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 248
>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
Length = 424
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++E LP KRKQRR RTTFT+ QL+ELE+AF RTHYPD++TR+
Sbjct: 210 DVESEPDLPLKRKQRRSRTTFTAEQLDELERAFERTHYPDIYTRE 254
>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
sapiens]
Length = 403
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
Length = 403
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 403
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 183 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 227
>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
Length = 403
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|429836904|dbj|BAM72542.1| paired box 3, partial [Pipistrellus abramus]
Length = 403
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 145 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 189
>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 479
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 204 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 248
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 285 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 329
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 183 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 227
>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
Length = 484
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 725 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 769
>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
sapiens]
Length = 407
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
Length = 484
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
Length = 529
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 251 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 295
>gi|195380433|ref|XP_002048975.1| GJ21339 [Drosophila virilis]
gi|194143772|gb|EDW60168.1| GJ21339 [Drosophila virilis]
Length = 464
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AFSRT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFSRTQYPDVYTRE 213
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 183 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 227
>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
Length = 473
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
Length = 509
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 235 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 279
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
Length = 481
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
Length = 473
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|109726691|gb|ABG45802.1| paired box protein Pax-3-like protein [Bos taurus]
Length = 195
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 2 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 54
>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
carolinensis]
Length = 485
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
carolinensis]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
Length = 488
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 210 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 254
>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|328705901|ref|XP_003242937.1| PREDICTED: hypothetical protein LOC100570786 [Acyrthosiphon pisum]
Length = 400
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%), Gaps = 10/55 (18%)
Query: 16 GEMEDYASLP----------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + Y SLP KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 125 GGLAAYKSLPYTTHDSILTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 179
>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
Length = 407
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|56694804|gb|AAW23064.1| Arx [Oikopleura dioica]
Length = 277
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR+RTTF+++QLEELE F RTHYPDVFTR+
Sbjct: 123 RRKQRRFRTTFSAYQLEELENTFVRTHYPDVFTRE 157
>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 12 DVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D EG ++E LP KRKQRR RTTFT+ QLEELEKAF RT YPD++TR+
Sbjct: 197 DKDEGLDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTRYPDIYTRE 247
>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
Length = 482
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 204 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 248
>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
Length = 505
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
gorilla]
gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
sapiens]
gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR RTTFTSFQLEE+EK F RTHYPDV+ R+
Sbjct: 107 KRKKRRNRTTFTSFQLEEMEKVFQRTHYPDVYMRE 141
>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 181 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 225
>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
Length = 506
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 194 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 238
>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
Length = 505
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
Full=Paired-domain transcription factor Pax3-A
gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
Length = 484
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 207 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 251
>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 201 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 245
>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
Length = 483
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|354505845|ref|XP_003514978.1| PREDICTED: paired box protein Pax-3-like, partial [Cricetulus
griseus]
Length = 288
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 2 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 54
>gi|353230507|emb|CCD76678.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 901
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 610 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTRE 644
>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 546
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 209 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 253
>gi|444512202|gb|ELV10061.1| Paired box protein Pax-3 [Tupaia chinensis]
Length = 458
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 180 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 224
>gi|86355079|dbj|BAE78774.1| paired box containing Pax3 [Pelodiscus sinensis]
Length = 418
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 140 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 184
>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
Length = 479
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|431917932|gb|ELK17161.1| Paired box protein Pax-3 [Pteropus alecto]
Length = 320
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 34 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 86
>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
Length = 250
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 8 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G D+ G D S P K+KQRR+RTTFT+ Q++ELEKAF RT YPDV+TR+
Sbjct: 159 KGHNDMDAGTGSDCDSEPGLSLKQKQRRHRTTFTAQQMDELEKAFDRTQYPDVYTRE 215
>gi|194318573|gb|ACF47676.1| paired box gene 3, partial [Capra hircus]
Length = 68
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 1 SAPQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 54
>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
abelii]
gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
sapiens]
Length = 505
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
aries]
Length = 489
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 211 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 255
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 3 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 55
>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
Length = 221
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 163 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 207
>gi|119591196|gb|EAW70790.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_b [Homo
sapiens]
Length = 330
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 57 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 101
>gi|158289998|ref|XP_311581.3| AGAP010359-PA [Anopheles gambiae str. PEST]
gi|157018428|gb|EAA07188.4| AGAP010359-PA [Anopheles gambiae str. PEST]
Length = 172
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GRG D S+ E E L KRKQRR RTTFTS QLE LEKAF+RT YPDV+TR+
Sbjct: 105 GRGS-DSSDTESEP-GILLKRKQRRSRTTFTSEQLEALEKAFTRTQYPDVYTRE 156
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 45 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 97
>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
Length = 460
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 183 DIDSEPDLPLKRKQRRGRTTFTAEQLEELERAFERTHYPDIYTRE 227
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 2 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 54
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 5/61 (8%)
Query: 5 SSGRGEEDVSE-----GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
++G+G +DV + + S KRK+RR RTTFTS+QLEE+EK F RTHYPDV+ R
Sbjct: 68 ANGKGNDDVKSPMGDSKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCR 127
Query: 60 Q 60
+
Sbjct: 128 E 128
>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 625
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SSG +V + E LP KRKQRR RTTF++ QL+ELE+ F RTHYPD++TR+
Sbjct: 164 SSGGEPNEVGGSDSESEPDLPLKRKQRRSRTTFSAEQLDELERCFERTHYPDIYTRE 220
>gi|256070449|ref|XP_002571555.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 415
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 176 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTRE 210
>gi|440808050|gb|AGC24168.1| Phox2 [Aplysia californica]
Length = 329
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELEKAF+ THYPD++TR+
Sbjct: 132 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTRE 166
>gi|195430056|ref|XP_002063073.1| GK21727 [Drosophila willistoni]
gi|194159158|gb|EDW74059.1| GK21727 [Drosophila willistoni]
Length = 472
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+TR+
Sbjct: 161 GSRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
>gi|344258001|gb|EGW14105.1| Paired box protein Pax-3 [Cricetulus griseus]
Length = 301
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 15 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 67
>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
Length = 484
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSELDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 250
>gi|440808048|gb|AGC24167.1| Phox2 [Lymnaea stagnalis]
Length = 343
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELEKAF+ THYPD++TR+
Sbjct: 134 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTRE 168
>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein VSX-1; AltName: Full=Transcription factor VSX1
gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
Length = 341
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRS 69
++D G+ D + KRK+RR+RT FTS QLEELEKAF HYPDV+ R+ + +
Sbjct: 129 DDDCLSGDRNDGKNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREM--LAMKTE 186
Query: 70 MPGELCVAW 78
+P + W
Sbjct: 187 LPEDRIQVW 195
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE ++ KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 43 APQSDEGSDIDSEPDLPL-----KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 95
>gi|125809508|ref|XP_001361148.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|195154827|ref|XP_002018314.1| GL16831 [Drosophila persimilis]
gi|54636322|gb|EAL25725.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|194114110|gb|EDW36153.1| GL16831 [Drosophila persimilis]
Length = 461
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
Length = 525
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 205 DIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 249
>gi|440808052|gb|AGC24169.1| Phox2 [Sepia officinalis]
Length = 336
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELEKAF+ THYPD++TR+
Sbjct: 129 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTRE 163
>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
Length = 439
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 5 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G D S+ E E L KRKQRR RTTFT+ QL+ELEKAF RT YPD++TR+
Sbjct: 158 NDGCKNSDNSDCESEPGIPL-KRKQRRSRTTFTALQLDELEKAFERTQYPDIYTRE 212
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
P+ G EED +PK+K RR RTTFT++QL ELE+AF R+HYPDV++R+
Sbjct: 18 STPTRGTPEED---------NEIPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSRE- 67
Query: 62 GRFSRQRSMPGELCVAW 78
+ + S+P W
Sbjct: 68 -ELAMKVSLPEVRVQVW 83
>gi|195058142|ref|XP_001995396.1| GH23137 [Drosophila grimshawi]
gi|193899602|gb|EDV98468.1| GH23137 [Drosophila grimshawi]
Length = 351
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+TR+
Sbjct: 161 GGRDSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
>gi|194756342|ref|XP_001960438.1| GF11512 [Drosophila ananassae]
gi|190621736|gb|EDV37260.1| GF11512 [Drosophila ananassae]
Length = 458
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE+AF+RT YPDV+TR+
Sbjct: 164 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 16 GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELC 75
G E+ +PK+K RR RTTFT++QL ELE+AF R+HYPDV++R+ + + S+P
Sbjct: 23 GTPEEDNEIPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSRE--ELAMKVSLPEVRV 80
Query: 76 VAW 78
W
Sbjct: 81 QVW 83
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella
teleta]
Length = 116
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E++D A +RKQRR RTTFT QLEELEKAF++THYPDVFTR+
Sbjct: 39 ELQDDA-FARRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTRE 81
>gi|391347837|ref|XP_003748160.1| PREDICTED: retina and anterior neural fold homeobox protein
2-like [Metaseiulus occidentalis]
Length = 184
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 33/35 (94%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRRYRTTF++ QL+ELEKAFS +HYPDVFTR+
Sbjct: 22 RRKQRRYRTTFSAQQLDELEKAFSVSHYPDVFTRE 56
>gi|350593920|ref|XP_003359706.2| PREDICTED: paired box protein Pax-3-like, partial [Sus scrofa]
Length = 136
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P S G + SE + LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 2 APQSDEGSDIDSEPD------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 54
>gi|124111297|gb|ABM92047.1| PAX7 [Pan troglodytes]
Length = 54
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%), Gaps = 1/39 (2%)
Query: 23 SLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
LP KRKQRR RTTFT+ QLEELEKAF RTHYPD++TR+
Sbjct: 2 DLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 40
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KR +RRYRTTFT FQL+ELE+AF +THYPDVF R+
Sbjct: 37 KRNERRYRTTFTQFQLDELERAFDKTHYPDVFMRE 71
>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
Length = 479
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT QLEELE+AF RTHYPD++TR+
Sbjct: 206 DIDSEPDLPLKRKQRRSRTTFTVEQLEELERAFERTHYPDIYTRE 250
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
E +A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+ R+ + + S+P
Sbjct: 41 EQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYARE--ELATKISLPEVRVQ 98
Query: 77 AW 78
W
Sbjct: 99 VW 100
>gi|198475763|ref|XP_001357148.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
gi|198137948|gb|EAL34215.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++D+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 199 DDDLSDCESEPGIAL-KRKQRRCRTTFSAAQLDELERAFERTQYPDIYTRE 248
>gi|395857545|ref|XP_003801152.1| PREDICTED: visual system homeobox 1 [Otolemur garnettii]
Length = 365
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
EDVS ++ +L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 148 EDVSG--LKASPTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 195
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELEKAF++THYPDVFTR+
Sbjct: 95 RRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTRE 129
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 5 SSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++G+G +D G++ + + K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 99 TAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 157
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 169
>gi|328788663|ref|XP_001120833.2| PREDICTED: paired mesoderm homeobox protein 2B [Apis mellifera]
Length = 196
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 169
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT+ QLEELE AF RTHYPDVFTR+
Sbjct: 53 RRKQRRNRTTFTAQQLEELESAFGRTHYPDVFTRE 87
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 169
>gi|307182442|gb|EFN69677.1| Paired mesoderm homeobox protein 2B [Camponotus floridanus]
Length = 368
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 136 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 170
>gi|114681337|ref|XP_001149985.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan troglodytes]
gi|397518460|ref|XP_003829404.1| PREDICTED: visual system homeobox 1 isoform 1 [Pan paniscus]
Length = 365
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 21 YASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
+A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+ R+ + + S+P W
Sbjct: 40 FAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYARE--ELATKISLPEVRVQVW 95
>gi|170045356|ref|XP_001850278.1| paired box protein [Culex quinquefasciatus]
gi|167868438|gb|EDS31821.1| paired box protein [Culex quinquefasciatus]
Length = 479
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 87 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 121
>gi|296200374|ref|XP_002747576.1| PREDICTED: visual system homeobox 1 [Callithrix jacchus]
Length = 364
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 151 DLKASPTLSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 194
>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_a [Homo sapiens]
gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
Length = 365
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
Length = 322
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
>gi|297706526|ref|XP_002830085.1| PREDICTED: visual system homeobox 1 isoform 1 [Pongo abelii]
Length = 365
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|119630510|gb|EAX10105.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_b [Homo sapiens]
Length = 386
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|157129916|ref|XP_001661815.1| paired box protein, putative [Aedes aegypti]
gi|108872028|gb|EAT36253.1| AAEL011647-PA [Aedes aegypti]
Length = 283
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 21 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 55
>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
Short=Xrx1; AltName: Full=Retina and anterior neural
fold homeobox protein A
gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
Length = 322
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ ++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 115 SDNKLSDDEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 161
>gi|297260462|ref|XP_002798304.1| PREDICTED: visual system homeobox 1-like, partial [Macaca mulatta]
Length = 354
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 141 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 184
>gi|355784763|gb|EHH65614.1| Transcription factor VSX1, partial [Macaca fascicularis]
Length = 228
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+ + + +P +
Sbjct: 15 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREM--LAVKTELPEDRIQ 72
Query: 77 AW 78
W
Sbjct: 73 VW 74
>gi|332027511|gb|EGI67588.1| Paired mesoderm homeobox protein 2B [Acromyrmex echinatior]
Length = 212
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 137 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 171
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P + R E G+ A+ K+K+RR RTTFTSFQLEE+E+ F +THYPDV+ R+
Sbjct: 94 PGADRTEGGDQAGKEAPPAAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMRE 150
>gi|242008553|ref|XP_002425067.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212508732|gb|EEB12329.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 181
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRRYRTTF+++QL+ELE+AF THYPDVF R+
Sbjct: 84 KRKQRRYRTTFSNYQLDELERAFRETHYPDVFFRE 118
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
LPK+K RR RTTFT++QL ELE+AF R+HYPDV++R+ + + S+P W
Sbjct: 31 LPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSRE--ELAMKVSLPEVRVQVW 83
>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
Length = 414
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E VS+ + E L KRKQRR RTTFT+ QL+ELEKAF RT YPD++TR+
Sbjct: 203 EGVSDCDSEPGIPL-KRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTRE 251
>gi|402883434|ref|XP_003905223.1| PREDICTED: visual system homeobox 1 isoform 1 [Papio anubis]
Length = 365
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|355563427|gb|EHH19989.1| Transcription factor VSX1, partial [Macaca mulatta]
Length = 246
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+ + + +P +
Sbjct: 33 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREM--LAVKTELPEDRIQ 90
Query: 77 AWTHHLNAAF 86
W + A +
Sbjct: 91 VWFQNRRAKW 100
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 9/61 (14%)
Query: 9 GEEDVSEGEME-----DYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
E+D GE++ D S P KRKQRR RTTFT+ QL+ELEKAF RT YPD++TR
Sbjct: 101 NEDDARIGEVKTSSGSDCDSEPGITLKRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTR 160
Query: 60 Q 60
+
Sbjct: 161 E 161
>gi|390351642|ref|XP_797654.3| PREDICTED: uncharacterized protein LOC593067 [Strongylocentrotus
purpuratus]
Length = 392
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELEKAF+ THYPD++ R+
Sbjct: 110 KRKQRRIRTTFTSAQLKELEKAFNETHYPDIYKRE 144
>gi|410972832|ref|XP_003992860.1| PREDICTED: paired mesoderm homeobox protein 2A, partial [Felis
catus]
Length = 273
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 35 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 94
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 95 ERVFAETHYPDIYTRE 110
>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
Length = 292
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 90 DADGGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 137
>gi|350418342|ref|XP_003491830.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Bombus
impatiens]
Length = 200
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 169
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
Length = 292
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 90 DADGGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 137
>gi|440907876|gb|ELR57965.1| Paired mesoderm homeobox protein 2A, partial [Bos grunniens mutus]
Length = 155
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 47 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 106
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 107 ERVFAETHYPDIYTRE 122
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
E +A PK+K RR RTTFT+FQL ELE+AF ++HYPDV+ R+ + + S+P
Sbjct: 120 EQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYARE--ELATKISLPEVRVQ 177
Query: 77 AW 78
W
Sbjct: 178 VW 179
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 51 RRKQRRNRTTFTVQQLEELESAFAKTHYPDVFTRE 85
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 40 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 74
>gi|2583019|gb|AAB82744.1| ARIX homeodomain protein [Homo sapiens]
Length = 284
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYNFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|345433362|dbj|BAK69338.1| paired-box transcription factor [Balanoglossus simodensis]
Length = 214
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ S GE D E LP KRKQRR RTTFT QLE LE+AF RTHYPD++TR+
Sbjct: 143 GILSRQDGESDC-----ELQPDLPLKRKQRRSRTTFTCEQLEHLERAFERTHYPDIYTRE 197
>gi|402894541|ref|XP_003910413.1| PREDICTED: paired mesoderm homeobox protein 2A [Papio anubis]
Length = 284
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|395814903|ref|XP_003780977.1| PREDICTED: paired mesoderm homeobox protein 2A [Otolemur garnettii]
Length = 284
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|157875755|pdb|1FJL|A Chain A, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
gi|157875756|pdb|1FJL|B Chain B, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
gi|157875757|pdb|1FJL|C Chain C, Homeodomain From The Drosophila Paired Protein Bound To
A Dna Oligonucleotide
Length = 81
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
ED+S+ E E +L KRKQRR RTTF++ QL+ELE+AF RT YPD++TR+
Sbjct: 1 EDISDCESEPGIAL-KRKQRRSRTTFSASQLDELERAFERTQYPDIYTRE 49
>gi|321453331|gb|EFX64576.1| hypothetical protein DAPPUDRAFT_334067 [Daphnia pulex]
Length = 265
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 6 SGRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GR ED ++E + KRKQRR RTTF++ QLEELE+AF R+ YPDV+TR+
Sbjct: 194 AGRSSEDEDSSDIESEPGIALKRKQRRSRTTFSADQLEELERAFERSQYPDVYTRE 249
>gi|46249382|ref|NP_005160.2| paired mesoderm homeobox protein 2A [Homo sapiens]
gi|297689630|ref|XP_002822248.1| PREDICTED: paired mesoderm homeobox protein 2A [Pongo abelii]
gi|77416873|sp|O14813.2|PHX2A_HUMAN RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|27371330|gb|AAH41564.1| Paired-like homeobox 2a [Homo sapiens]
gi|119595262|gb|EAW74856.1| paired-like (aristaless) homeobox 2a [Homo sapiens]
gi|158254722|dbj|BAF83334.1| unnamed protein product [Homo sapiens]
gi|167773113|gb|ABZ91991.1| paired-like homeobox 2a [synthetic construct]
Length = 284
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|431898078|gb|ELK06781.1| Paired mesoderm homeobox protein 2A [Pteropus alecto]
Length = 284
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|426391199|ref|XP_004061968.1| PREDICTED: visual system homeobox 1 isoform 1 [Gorilla gorilla
gorilla]
Length = 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|242019572|ref|XP_002430234.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
gi|212515334|gb|EEB17496.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
Length = 168
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 24 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 58
>gi|6094305|sp|Q26602.1|SMOX3_SCHMA RecName: Full=Homeobox protein SMOX-3
gi|552250|gb|AAA29930.1| paired-like homeodomain protein, partial [Schistosoma mansoni]
Length = 288
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 1 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTRE 35
>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
Length = 301
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G++ D + PK+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 96 DGKLSDDEN-PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 140
>gi|73988195|ref|XP_542326.2| PREDICTED: paired mesoderm homeobox protein 2A [Canis lupus
familiaris]
Length = 284
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|335294428|ref|XP_003357226.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Sus scrofa]
Length = 286
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 5 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRF 64
SS G+ D ++G+ K+K RR RTTFT+FQL ELE+AF ++HYPDV+TR+
Sbjct: 67 SSNDGKSDEADGDSS------KKKLRRNRTTFTTFQLHELERAFEKSHYPDVYTRE--EL 118
Query: 65 SRQRSMPGELCVAW 78
+ + S+P W
Sbjct: 119 ALKISLPEVRVQVW 132
>gi|149719311|ref|XP_001499207.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Equus
caballus]
Length = 284
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|53791211|dbj|BAD54702.1| transcription factor [Rattus norvegicus]
Length = 281
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|322797345|gb|EFZ19457.1| hypothetical protein SINV_02900 [Solenopsis invicta]
Length = 185
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 137 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 171
>gi|40806216|ref|NP_955457.1| visual system homeobox 1 isoform b [Homo sapiens]
gi|9802265|gb|AAF99657.1|AF251034_1 homeodomain protein RINX, S1 isoform [Homo sapiens]
gi|112820186|gb|ABI23974.1| visual system homeobox 1 transcript variant 2 [Homo sapiens]
Length = 239
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|426369665|ref|XP_004051805.1| PREDICTED: paired mesoderm homeobox protein 2A [Gorilla gorilla
gorilla]
Length = 342
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 104 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 163
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 164 ERVFAETHYPDIYTRE 179
>gi|328802691|ref|NP_001179086.1| paired mesoderm homeobox protein 2A [Bos taurus]
gi|296479851|tpg|DAA21966.1| TPA: paired-like homeobox 2a-like [Bos taurus]
Length = 284
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|312381183|gb|EFR26989.1| hypothetical protein AND_06563 [Anopheles darlingi]
Length = 291
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GRG D S+ E E L KRKQRR RTTFT QLE LEKAF RT YPDV+TR+
Sbjct: 26 GRGS-DSSDTESEP-GILLKRKQRRSRTTFTGEQLEALEKAFQRTQYPDVYTRE 77
>gi|149068721|gb|EDM18273.1| paired-like homeobox 2a [Rattus norvegicus]
Length = 281
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|6679399|ref|NP_032913.1| paired mesoderm homeobox protein 2A [Mus musculus]
gi|6093752|sp|Q62066.1|PHX2A_MOUSE RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=Aristaless homeobox protein homolog; AltName:
Full=PHOX2A homeodomain protein; AltName:
Full=Paired-like homeobox 2A
gi|402642|emb|CAA52923.1| Phox2 homeodomain protein [Mus musculus]
gi|225000420|gb|AAI72722.1| Paired-like homeobox 2a [synthetic construct]
gi|225000566|gb|AAI72615.1| Paired-like homeobox 2a [synthetic construct]
Length = 280
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|112820190|gb|ABI23976.1| visual system homeobox 1 transcript variant 4 [Homo sapiens]
Length = 218
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|45382115|ref|NP_990100.1| visual system homeobox 1 [Gallus gallus]
gi|25009570|sp|Q9IAL2.1|VSX1_CHICK RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein Chx10-1; AltName: Full=Transcription factor VSX1
gi|7211446|gb|AAF40312.1|AF178670_1 homeobox protein Chx10-1 [Gallus gallus]
Length = 350
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMP 71
D SE +M AS KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+ + + +P
Sbjct: 142 DASELKMP--ASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREM--LAVKTELP 197
Query: 72 GELCVAWTHHLNAAF 86
+ W + A +
Sbjct: 198 EDRIQVWFQNRRAKW 212
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
E EDY LP +K RR RTTFT++QL ELE AF R+HYPDV++R+ + + S+P
Sbjct: 26 EGEDY-KLPTKKHRRNRTTFTTYQLHELEHAFERSHYPDVYSRE--ELAMKVSLPEVRVQ 82
Query: 77 AW 78
W
Sbjct: 83 VW 84
>gi|372266239|ref|NP_001243200.1| visual system homeobox 1 isoform c [Homo sapiens]
gi|112820192|gb|ABI23977.1| visual system homeobox 1 transcript variant 5 [Homo sapiens]
Length = 236
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|410054955|ref|XP_003953744.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 236
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|410054953|ref|XP_003953743.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 218
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|397518462|ref|XP_003829405.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan paniscus]
gi|410054951|ref|XP_003953742.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 280
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|380018965|ref|XP_003693389.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Apis florea]
Length = 187
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 135 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 169
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 83
>gi|410954493|ref|XP_003983899.1| PREDICTED: visual system homeobox 1 [Felis catus]
Length = 364
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKVSPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|148684574|gb|EDL16521.1| paired-like homeobox 2a [Mus musculus]
Length = 263
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 29 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 88
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 89 ERVFAETHYPDIYTRE 104
>gi|112820188|gb|ABI23975.1| visual system homeobox 1 transcript variant 3 [Homo sapiens]
Length = 280
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK+RR RTTFTS+QLEE+EK F RTHYPDV+ R+
Sbjct: 134 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCRE 167
>gi|125809511|ref|XP_001361149.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
gi|54636323|gb|EAL25726.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G ++ G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 158 LGGGAASAGSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|426391207|ref|XP_004061972.1| PREDICTED: visual system homeobox 1 isoform 5 [Gorilla gorilla
gorilla]
Length = 218
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|195154829|ref|XP_002018315.1| GL17644 [Drosophila persimilis]
gi|194114111|gb|EDW36154.1| GL17644 [Drosophila persimilis]
Length = 432
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G ++ G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 158 LGGGAASAGSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|307205017|gb|EFN83540.1| Paired mesoderm homeobox protein 2B [Harpegnathos saltator]
Length = 223
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 142 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 176
>gi|224047324|ref|XP_002195530.1| PREDICTED: visual system homeobox 1 [Taeniopygia guttata]
Length = 260
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 10/83 (12%)
Query: 4 PSSGRGEEDVSE-----GEMEDY---ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 55
P + R +E++S+ G+ D S KRK+RR+RT FT+ QLEELEKAF+ HYPD
Sbjct: 34 PDARRHKENISDEDSLSGDASDLKMTTSQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPD 93
Query: 56 VFTRQCGRFSRQRSMPGELCVAW 78
V+ R+ + + +P + W
Sbjct: 94 VYAREM--LAVKTELPEDRIQVW 114
>gi|410054957|ref|XP_003953745.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|372266156|ref|NP_001243201.1| visual system homeobox 1 isoform d [Homo sapiens]
gi|112820194|gb|ABI23978.1| visual system homeobox 1 transcript variant 6 [Homo sapiens]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|397489578|ref|XP_003815802.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2A
[Pan paniscus]
Length = 221
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 39 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 98
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 99 ERVFAETHYPDIYTRE 114
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 5 SSGRGEEDVSEGEM---EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++G+G +D G++ + + K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 159 TAGKGSQDRGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 217
>gi|397518464|ref|XP_003829406.1| PREDICTED: visual system homeobox 1 isoform 3 [Pan paniscus]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|281340522|gb|EFB16106.1| hypothetical protein PANDA_016951 [Ailuropoda melanoleuca]
Length = 172
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 33 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 92
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 93 ERVFAETHYPDIYTRE 108
>gi|391332291|ref|XP_003740569.1| PREDICTED: uncharacterized protein LOC100905961 [Metaseiulus
occidentalis]
Length = 302
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL ELE+AF THYPD++TR+
Sbjct: 137 KRKQRRIRTTFTSAQLRELERAFQETHYPDIYTRE 171
>gi|443715779|gb|ELU07595.1| hypothetical protein CAPTEDRAFT_70059, partial [Capitella teleta]
Length = 65
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELEKAF+ THYPD++TR+
Sbjct: 2 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTRE 36
>gi|16758738|ref|NP_446321.1| paired mesoderm homeobox protein 2A [Rattus norvegicus]
gi|8134639|sp|Q62782.1|PHX2A_RAT RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|1002494|gb|AAB04168.1| Arix1 homeodomain protein [Rattus norvegicus]
Length = 281
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|426391203|ref|XP_004061970.1| PREDICTED: visual system homeobox 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 236
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 66 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 100
>gi|444513121|gb|ELV10274.1| ALX homeobox protein 1 [Tupaia chinensis]
Length = 181
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GVP G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GVPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
Length = 447
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E VS+ + E L KRKQRR RTTFT+ QL+ELEKAF RT YPD++TR+
Sbjct: 159 EGVSDCDSEPGIPL-KRKQRRSRTTFTAHQLDELEKAFERTQYPDIYTRE 207
>gi|73989846|ref|XP_850138.1| PREDICTED: visual system homeobox 1 [Canis lupus familiaris]
Length = 363
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 160 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 194
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+++ E E ++ PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 249 EDEMDEMEADENGE-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 298
>gi|395752029|ref|XP_003779347.1| PREDICTED: visual system homeobox 1 isoform 3 [Pongo abelii]
Length = 236
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|395752027|ref|XP_003779346.1| PREDICTED: visual system homeobox 1 isoform 2 [Pongo abelii]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S +RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 43 SFARRKQRRNRTTFTLQQLEELENAFAKTHYPDVFTRE 80
>gi|402883438|ref|XP_003905225.1| PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|426391205|ref|XP_004061971.1| PREDICTED: visual system homeobox 1 isoform 4 [Gorilla gorilla
gorilla]
Length = 280
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 186 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 220
>gi|426391201|ref|XP_004061969.1| PREDICTED: visual system homeobox 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 10 EEDVSEGEMEDYASLP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ED + D + P KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 142 DEDSQSEDRNDLKASPTSGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|432892481|ref|XP_004075802.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oryzias
latipes]
Length = 299
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
>gi|402883436|ref|XP_003905224.1| PREDICTED: visual system homeobox 1 isoform 2 [Papio anubis]
Length = 280
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ +L KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 152 DLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|147905324|ref|NP_001088286.1| paired-like homeobox 2b [Xenopus laevis]
gi|54038154|gb|AAH84305.1| LOC495120 protein [Xenopus laevis]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ S G + E +P KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 147 GDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 200
>gi|270005124|gb|EFA01572.1| hypothetical protein TcasGA2_TC007133 [Tribolium castaneum]
Length = 169
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 37 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 71
>gi|172355888|ref|NP_001116492.1| paired-like homeobox 2b [Xenopus (Silurana) tropicalis]
gi|171846498|gb|AAI61760.1| phox2b protein [Xenopus (Silurana) tropicalis]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|147904024|ref|NP_001084383.1| paired-like homeobox 2b [Xenopus laevis]
gi|38425329|gb|AAR19766.1| homeodomain protein [Xenopus laevis]
Length = 293
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|301783553|ref|XP_002927192.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Ailuropoda
melanoleuca]
Length = 179
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 31 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 90
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 91 ERVFAETHYPDIYTRE 106
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 31 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 65
>gi|426245932|ref|XP_004016756.1| PREDICTED: paired mesoderm homeobox protein 2A [Ovis aries]
Length = 252
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 17/76 (22%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G P G + + G + D Y+++P KRKQRR RTTFTS QL+EL
Sbjct: 46 GPPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKEL 105
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 106 ERVFAETHYPDIYTRE 121
>gi|291410619|ref|XP_002721593.1| PREDICTED: visual system homeobox 1-like [Oryctolagus cuniculus]
Length = 405
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCV 76
++++ L KRK+RR+RT F++ QLEELEKAFS HYPDV+ R+ + + +P +
Sbjct: 116 DLKESPILGKRKKRRHRTVFSALQLEELEKAFSEAHYPDVYAREM--LAMKTELPEDRIQ 173
Query: 77 AWTHHLNAAF 86
W + A +
Sbjct: 174 VWFQNRRAKW 183
>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
Length = 488
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP KRKQR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 210 DIDSEPDLPLKRKQRGSRTTFTAEQLEELERAFERTHYPDIYTRE 254
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
impatiens]
Length = 522
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEG-EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ S G + E +P KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 192 GDRKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 245
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+P+ GE SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 101 LPAGSGGEGKPSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 152
>gi|126010754|gb|AAI33553.1| VSX1 protein [Bos taurus]
Length = 236
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 5 SSGRGEEDVSE-GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+SG + D+ E GE D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 96 TSGPDKTDLDELGEKCD-SNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 151
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|449270500|gb|EMC81167.1| Paired mesoderm homeobox protein 2A, partial [Columba livia]
Length = 178
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 15 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 49
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 94 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 128
>gi|407025359|gb|AFS65546.1| Alx1 [Patiria miniata]
Length = 393
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR RTTFTSFQLEE+E+ F +THYPDV+ R+
Sbjct: 105 KRKKRRNRTTFTSFQLEEMERVFQKTHYPDVYCRE 139
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 SDGKLSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELEKAF RT YPDV+TR+
Sbjct: 352 KRKQRRSRTTFTAQQLDELEKAFERTQYPDVYTRE 386
>gi|195380431|ref|XP_002048974.1| GJ21022 [Drosophila virilis]
gi|194143771|gb|EDW60167.1| GJ21022 [Drosophila virilis]
Length = 442
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 171 GSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 221
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 83
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 234 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 268
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 SDGKLSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|348580359|ref|XP_003475946.1| PREDICTED: ALX homeobox protein 1-like [Cavia porcellus]
Length = 353
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 7/61 (11%)
Query: 5 SSGRGEEDVSEGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
S G+G + +GEM++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R
Sbjct: 132 SPGKGMPE--KGEMDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVR 189
Query: 60 Q 60
+
Sbjct: 190 E 190
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GIPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|379692648|gb|AFD10414.1| Pax3, partial [Capra hircus]
Length = 142
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 32/35 (91%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 12 RRKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 46
>gi|195124303|ref|XP_002006633.1| GI21167 [Drosophila mojavensis]
gi|193911701|gb|EDW10568.1| GI21167 [Drosophila mojavensis]
Length = 437
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 172 GSEDESEDDTEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 222
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GIPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 49 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 83
>gi|118792272|ref|XP_320238.3| AGAP012303-PA [Anopheles gambiae str. PEST]
gi|116116821|gb|EAA00674.4| AGAP012303-PA [Anopheles gambiae str. PEST]
Length = 108
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 47 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 81
>gi|449273455|gb|EMC82949.1| Paired mesoderm homeobox protein 2B [Columba livia]
Length = 149
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPGS--CSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|426241769|ref|XP_004014761.1| PREDICTED: visual system homeobox 1 [Ovis aries]
Length = 310
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAWTHHLNAA 85
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+ + + +P + W + A
Sbjct: 106 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREM--LAVKTELPEDRIQVWFQNRRAK 163
Query: 86 F 86
+
Sbjct: 164 W 164
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 173 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 207
>gi|348511737|ref|XP_003443400.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oreochromis
niloticus]
Length = 285
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 20 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 54
>gi|351706553|gb|EHB09472.1| ALX homeobox protein 1 [Heterocephalus glaber]
Length = 327
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 7/61 (11%)
Query: 5 SSGRGEEDVSEGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
S G+G + +GEM++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R
Sbjct: 106 SPGKGMPE--KGEMDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVR 163
Query: 60 Q 60
+
Sbjct: 164 E 164
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 236 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 270
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+G++ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 286 SDGKLSDEDQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 331
>gi|3493363|dbj|BAA32556.1| Pax-3 [Oryzias latipes]
Length = 137
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 58
+++ LP KRKQRR RTTFT+ QLEELE+AF RTHYPD++T
Sbjct: 95 DVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYT 137
>gi|66571172|gb|AAY51551.1| IP01408p [Drosophila melanogaster]
gi|220943358|gb|ACL84222.1| CG3388-PA [synthetic construct]
Length = 427
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 166 GSEDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|27807477|ref|NP_777192.1| visual system homeobox 1 [Bos taurus]
gi|25009569|sp|Q9GMA3.1|VSX1_BOVIN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802261|gb|AAF99655.1|AF251032_1 homeodomain protein RINX [Bos taurus]
gi|296481350|tpg|DAA23465.1| TPA: visual system homeobox 1 [Bos taurus]
Length = 365
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|17647491|ref|NP_523863.1| gooseberry [Drosophila melanogaster]
gi|123376|sp|P09082.1|GSB_DROME RecName: Full=Protein gooseberry; AltName: Full=BSH9; AltName:
Full=Protein gooseberry distal
gi|10727095|gb|AAF47315.2| gooseberry [Drosophila melanogaster]
gi|212287970|gb|ACJ23460.1| FI07617p [Drosophila melanogaster]
Length = 427
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 166 GSEDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|158164|gb|AAA28834.1| BSH4 encoded protein, partial [Drosophila melanogaster]
Length = 80
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 10 EEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ D+S+ E E L KRKQRR RTTFT+ QLE LE AFSRT YPDV+TR+
Sbjct: 3 DSDISDTESEPGIPL-KRKQRRSRTTFTAEQLEALEGAFSRTQYPDVYTRE 52
>gi|443732882|gb|ELU17445.1| hypothetical protein CAPTEDRAFT_70989, partial [Capitella teleta]
Length = 60
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 29 QRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
QRRYRTTF+S QL+ELEK F RTHYPDVFTR+
Sbjct: 1 QRRYRTTFSSLQLDELEKTFQRTHYPDVFTRE 32
>gi|335304550|ref|XP_003359967.1| PREDICTED: visual system homeobox 1-like [Sus scrofa]
Length = 364
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 195
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 11 PKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 46
>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
Length = 497
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 8 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGR 63
+G+E V E E +D +S KRK +R RT+FT Q+E LEK F RTHYPDVF R+ R
Sbjct: 206 KGKESVVESEAKDGSSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVFARE--R 263
Query: 64 FSRQRSMPGELCVAW 78
+ + +P W
Sbjct: 264 LATKIDLPEARIQVW 278
>gi|432960958|ref|XP_004086512.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oryzias
latipes]
Length = 285
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|402591778|gb|EJW85707.1| hypothetical protein WUBG_03381 [Wuchereria bancrofti]
Length = 143
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ +RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 28 MERRKQRRIRTTFTSGQLKELERAFLETHYPDIYTRE 64
>gi|395507743|ref|XP_003758180.1| PREDICTED: visual system homeobox 1 [Sarcophilus harrisii]
Length = 346
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 10 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQ 67
E+ +SE E++ S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+ + +
Sbjct: 150 EDSLSEDKNELKTPTSHIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREM--LALK 207
Query: 68 RSMPGELCVAW 78
+P + W
Sbjct: 208 TELPEDRIQVW 218
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|449269616|gb|EMC80374.1| Visual system homeobox 1, partial [Columba livia]
Length = 204
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
M +P D S+ +M S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+
Sbjct: 1 MLLPDKDSLSGDASDLKMS--TSQTKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYARE 58
Query: 61 CGRFSRQRSMPGELCVAWTHHLNAAF 86
+ + +P + W + A +
Sbjct: 59 M--LAMKTELPEDRIQVWFQNRRAKW 82
>gi|348523580|ref|XP_003449301.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oreochromis
niloticus]
Length = 301
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
>gi|18859553|ref|NP_571408.1| visual system homeobox 1 [Danio rerio]
gi|25009566|sp|O42250.2|VSX1_DANRE RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor VSX1
gi|7159413|gb|AAB71611.2| paired-like homeobox protein [Danio rerio]
Length = 344
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FTS QLEELEKAF+ HYPDV+ R+ + + +P + W
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREM--LAMKTELPEDRIQVW 198
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|395820130|ref|XP_003783428.1| PREDICTED: ALX homeobox protein 1 [Otolemur garnettii]
Length = 326
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Query: 5 SSGRGEEDVSEGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
S G+G ++ +GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R
Sbjct: 105 SPGKGIQE--KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVR 162
Query: 60 Q 60
+
Sbjct: 163 E 163
>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
Length = 496
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 8 RGEEDVSEGEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGR 63
+G+E V E E +D +S KRK +R RT+FT Q+E LEK F RTHYPDVF R+ R
Sbjct: 206 KGKESVVESEAKDGSSEARLQLKRKLQRNRTSFTQIQVEALEKEFERTHYPDVFARE--R 263
Query: 64 FSRQRSMPGELCVAW 78
+ + +P W
Sbjct: 264 LATKIDLPEARIQVW 278
>gi|154147573|ref|NP_001093670.1| visual system homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134254267|gb|AAI35614.1| vsx1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGEL 74
+ +++ +S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+ + + +P +
Sbjct: 136 KNDLKASSSQAKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREM--LALKTELPEDR 193
Query: 75 CVAW 78
W
Sbjct: 194 IQVW 197
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 17 EMEDYASLPK--RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++ D LPK K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 132 QLTDSMELPKSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 177
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 17 EMEDYASLPK--RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
++ D LPK K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 153 QLTDSMELPKSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 198
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|426254107|ref|XP_004023535.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ovis aries]
Length = 173
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 8/61 (13%)
Query: 2 GVP--SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
G+P S G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R
Sbjct: 63 GLPGGPSAPGDSKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 116
Query: 60 Q 60
+
Sbjct: 117 E 117
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 161 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 206
>gi|395734890|ref|XP_002814749.2| PREDICTED: uncharacterized protein LOC100444086 [Pongo abelii]
Length = 276
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|37748754|gb|AAH59574.1| Vsx1 protein [Danio rerio]
Length = 340
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FTS QLEELEKAF+ HYPDV+ R+ + + +P + W
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREM--LAMKTELPEDRIQVW 198
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 49 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 83
>gi|331271828|gb|AED02519.1| paired box 3 protein [Coturnix japonica]
Length = 114
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ LP K KQRR RTTFT+ QLEELE+AF RTHYPD++TR+
Sbjct: 40 DIDSEPDLPLKGKQRRSRTTFTAEQLEELERAFERTHYPDIYTRE 84
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|339259158|ref|XP_003369765.1| homeobox protein SMOX-3 [Trichinella spiralis]
gi|316965991|gb|EFV50627.1| homeobox protein SMOX-3 [Trichinella spiralis]
Length = 395
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELEKAF THYPD++TR+
Sbjct: 291 RRKQRRIRTTFTSSQLKELEKAFQATHYPDIYTRE 325
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|126331693|ref|XP_001365345.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Monodelphis
domestica]
Length = 314
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GR D S+ E E L KRKQRR RTTF++ Q+EELE+AF RT YPD++TR+
Sbjct: 140 GRLGNDESDCESEPGIPL-KRKQRRSRTTFSAEQVEELERAFERTQYPDIYTRE 192
>gi|26342783|dbj|BAC35048.1| unnamed protein product [Mus musculus]
Length = 192
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|402869237|ref|XP_003898672.1| PREDICTED: paired mesoderm homeobox protein 2B [Papio anubis]
Length = 314
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|397514171|ref|XP_003827369.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pan
paniscus]
Length = 309
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 130 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 175
>gi|321453327|gb|EFX64572.1| hypothetical protein DAPPUDRAFT_15023 [Daphnia pulex]
Length = 202
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D+S+ E E +L KRKQRR RTTF++ QLEELE++F RT YPDV+TR+
Sbjct: 126 DLSDIESEPGITL-KRKQRRSRTTFSAEQLEELERSFERTQYPDVYTRE 173
>gi|395856676|ref|XP_003800747.1| PREDICTED: uncharacterized protein LOC100945104 isoform 2 [Otolemur
garnettii]
Length = 281
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|148224192|ref|NP_001084385.1| paired-like homeobox 2a [Xenopus laevis]
gi|38425325|gb|AAR19764.1| homeodomain protein [Xenopus laevis]
gi|115529155|gb|AAI24892.1| Phox2a protein [Xenopus laevis]
Length = 281
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
>gi|46309511|ref|NP_996953.1| paired mesoderm homeobox protein 2A [Danio rerio]
gi|42542899|gb|AAH66448.1| Paired-like homeobox 2a [Danio rerio]
Length = 277
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 86 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 120
>gi|344280090|ref|XP_003411818.1| PREDICTED: visual system homeobox 1-like [Loxodonta africana]
Length = 366
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+
Sbjct: 162 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYARE 196
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 48 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 82
>gi|170572557|ref|XP_001892152.1| homeobox protein [Brugia malayi]
gi|158602775|gb|EDP39026.1| homeobox protein, putative [Brugia malayi]
Length = 286
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ +RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 171 MERRKQRRIRTTFTSGQLKELERAFLETHYPDIYTRE 207
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 86 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 120
>gi|344258328|gb|EGW14432.1| Paired mesoderm homeobox protein 2B [Cricetulus griseus]
Length = 182
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 84 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 118
>gi|431915726|gb|ELK16059.1| Homeobox protein aristaless-like 4 [Pteropus alecto]
Length = 195
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 126 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 160
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 35/49 (71%), Gaps = 6/49 (12%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D +EGE K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 164 DKTEGESN------KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 206
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|170038395|ref|XP_001847036.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882013|gb|EDS45396.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 68
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S +RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 16 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 53
>gi|34419191|dbj|BAC84954.1| homeobox protein Chx10-1 [Cynops pyrrhogaster]
Length = 341
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 10 EEDVSEGEMEDY---ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSR 66
++D G+ D S KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+ +
Sbjct: 127 DDDSLSGDKSDLKTPTSQIKRKKRRHRTVFTAHQLEELEKAFSDAHYPDVYAREM--LAM 184
Query: 67 QRSMPGELCVAW 78
+ +P + W
Sbjct: 185 KTELPEDRIQVW 196
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 48 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 82
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 408 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 442
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 231
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 211 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 245
>gi|284005034|ref|NP_001164681.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
gi|283464071|gb|ADB22619.1| paired-like homeobox 2 [Saccoglossus kowalevskii]
Length = 264
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GVP R D S G + KRKQRR RTTFTS QL+ELE+AF THYPD++ R+
Sbjct: 83 GVPYMHRVLHD-STGTIGSGGPGEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYKRE 140
>gi|350580147|ref|XP_003480752.1| PREDICTED: hypothetical protein LOC100738855, partial [Sus scrofa]
Length = 397
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 349 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 383
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + S E D K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 159 GTDLASPLEKADGGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 210
>gi|91089659|ref|XP_974185.1| PREDICTED: similar to gooseberry-neuro CG2692-PA [Tribolium
castaneum]
gi|270012692|gb|EFA09140.1| gooseberry-neuro [Tribolium castaneum]
Length = 338
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G E+ S+ E E L KRKQRR RTTF+ QLE LE+AFSRT YPDV+TR+
Sbjct: 158 GREEESDTESEPGIPL-KRKQRRSRTTFSGEQLEALERAFSRTQYPDVYTRE 208
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 151 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 185
>gi|312377652|gb|EFR24431.1| hypothetical protein AND_10977 [Anopheles darlingi]
Length = 167
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S +RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 113 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 150
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 119 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 153
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 194 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 228
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 231
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|334326510|ref|XP_001373881.2| PREDICTED: retinal homeobox protein Rx1-like [Monodelphis
domestica]
Length = 208
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
G P GR GE ++ PK+K RR RTTFT+FQL +LE+AF R+HYPDV++R+
Sbjct: 8 GEPVEGR---PPGSGEADE---APKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSRE- 60
Query: 62 GRFSRQRSMPGELCVAW 78
+ Q ++P W
Sbjct: 61 -ELAMQVNLPEVRVQVW 76
>gi|432114786|gb|ELK36541.1| Visual system homeobox 1 [Myotis davidii]
Length = 221
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAWTHHLNAA 85
KRK+RR+RT FT+ QLEELEKAFS HYPDV+ R+ + + +P + W + A
Sbjct: 23 KRKKRRHRTVFTNQQLEELEKAFSEAHYPDVYAREM--LAMKTELPEDRIQVWFQNRRAK 80
Query: 86 F 86
+
Sbjct: 81 W 81
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + +D +E E K+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 112 GAAETAEDADDRAEDEKTQVGEDMKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 170
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 58 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 92
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 1 MGVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ P + EED ED P +K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 35 LSSPRTSISEED------EDPLRAPSKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 88
>gi|444731497|gb|ELW71850.1| Paired mesoderm homeobox protein 2A [Tupaia chinensis]
Length = 317
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 155 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 189
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 174
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 233
>gi|73974940|ref|XP_852840.1| PREDICTED: paired mesoderm homeobox protein 2B [Canis lupus
familiaris]
Length = 314
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|393897730|gb|EFO12532.2| homeobox protein [Loa loa]
Length = 116
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ +RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 1 MERRKQRRIRTTFTSAQLKELERAFLETHYPDIYTRE 37
>gi|296479667|tpg|DAA21782.1| TPA: homeobox protein aristaless-like 4 [Bos taurus]
Length = 246
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 197 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 231
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 47 RRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 81
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 185 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 219
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 214 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 248
>gi|312118188|ref|XP_003151537.1| homeobox protein [Loa loa]
Length = 113
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ +RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 1 MERRKQRRIRTTFTSAQLKELERAFLETHYPDIYTRE 37
>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
Length = 390
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT QLEELE+AF RT YPDV+TR+
Sbjct: 183 KRKQRRSRTTFTGEQLEELERAFQRTQYPDVYTRE 217
>gi|6983694|emb|CAB75355.1| Phox2b protein [Gallus gallus]
Length = 119
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 36 GCPSLTPGS--CSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 93
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 94 ERVFAETHYPDIYTRE 109
>gi|4633284|gb|AAD26698.1|AF117979_1 homeodomain transcription factor NBPHOX [Homo sapiens]
gi|1841338|dbj|BAA11555.1| NBPhox [Homo sapiens]
gi|5672611|dbj|BAA82670.1| NBPhox [Homo sapiens]
Length = 314
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 242
>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
[Bombus terrestris]
Length = 502
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 188 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 222
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 210 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 244
>gi|354505900|ref|XP_003515005.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Cricetulus griseus]
Length = 148
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 206 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 240
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 199 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 233
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 224 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 258
>gi|351706647|gb|EHB09566.1| Visual system homeobox 1 [Heterocephalus glaber]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 10 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+ +SE +++ L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 86 EDSLSEDRSDLKASPGLGKRKKRRHRTVFTAQQLEELEKAFGEAHYPDVYARE 138
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 213 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 247
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 243
>gi|334312715|ref|XP_003339770.1| PREDICTED: visual system homeobox 1-like [Monodelphis domestica]
Length = 348
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 10 EEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQ 67
E+ +SE E++ S KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+ + +
Sbjct: 151 EDSLSEDKSELKTSTSHIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREM--LALK 208
Query: 68 RSMPGELCVAW 78
+P + W
Sbjct: 209 TELPEDRIQVW 219
>gi|291384330|ref|XP_002708569.1| PREDICTED: paired-like homeobox 2a-like [Oryctolagus cuniculus]
Length = 290
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 92 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 126
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 245
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 245
>gi|449504259|ref|XP_002198614.2| PREDICTED: homeobox protein aristaless-like 4 [Taeniopygia guttata]
Length = 429
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 188 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 222
>gi|431906966|gb|ELK11085.1| Retinal homeobox protein Rx [Pteropus alecto]
Length = 215
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 218 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 252
>gi|432108245|gb|ELK33133.1| Paired mesoderm homeobox protein 2B [Myotis davidii]
Length = 236
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 39 GCPSLTPG--SCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 96
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 97 ERVFAETHYPDIYTRE 112
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 245
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 189 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 223
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 245
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%), Gaps = 5/52 (9%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G +D EG+ E+ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 529 GSDD--EGQDENCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 575
>gi|345784350|ref|XP_852642.2| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Canis
lupus familiaris]
Length = 288
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+P +K RRYRTTFT+ QL+ELE+ F+RTHYPD+F R+
Sbjct: 142 SMPSKK-RRYRTTFTTHQLDELERVFNRTHYPDIFLRE 178
>gi|301782565|ref|XP_002926696.1| PREDICTED: ALX homeobox protein 1-like [Ailuropoda melanoleuca]
gi|281346099|gb|EFB21683.1| hypothetical protein PANDA_016388 [Ailuropoda melanoleuca]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G D+ E + +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKG----DLDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 15 EGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E + E +P KRKQRR RTTFT QLE LE+AF RT YPDV+TR+
Sbjct: 169 ESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYTRE 215
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 123 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 157
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 6/49 (12%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D ++GE PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 126 DSADGEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 243
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 243
>gi|327262713|ref|XP_003216168.1| PREDICTED: visual system homeobox 1-like [Anolis carolinensis]
Length = 371
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FT+ QLEELEKAF+ HYPDV+ R+ + + +P + W
Sbjct: 173 KRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAREM--LAMKTELPEDRIQVW 223
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 243
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 6/49 (12%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D ++GE PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 126 DSADGEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D +G+ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 106 DGGDGKPSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 153
>gi|363733528|ref|XP_001234151.2| PREDICTED: paired mesoderm homeobox protein 2B [Gallus gallus]
Length = 250
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|321456738|gb|EFX67838.1| hypothetical protein DAPPUDRAFT_8649 [Daphnia pulex]
Length = 78
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 15 KRKQRRIRTTFTSSQLKELERAFQETHYPDIYTRE 49
>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
Length = 881
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%), Gaps = 5/52 (9%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G +D EG+ E+ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 528 GSDD--EGQDENCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 574
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 174
>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
Length = 405
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 167 GGSSGDDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 219
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 99 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 133
>gi|189240573|ref|XP_974212.2| PREDICTED: similar to AGAP010358-PA [Tribolium castaneum]
Length = 410
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 15 EGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E + E +P KRKQRR RTTFT QLE LE+AF RT YPDV+TR+
Sbjct: 173 ESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYTRE 219
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 209 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 243
>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
rotundata]
Length = 398
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 160 GGSSGDDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 212
>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
Length = 404
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 166 GGSSGDDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 218
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 89
>gi|345780690|ref|XP_539704.3| PREDICTED: ALX homeobox protein 1 [Canis lupus familiaris]
Length = 265
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G D+ E + +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 48 GMPEKG----DLDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 102
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPG--SCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|426245996|ref|XP_004023227.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
4-like [Ovis aries]
Length = 505
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 314 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 348
>gi|380021136|ref|XP_003694430.1| PREDICTED: uncharacterized protein LOC100866617 [Apis florea]
Length = 388
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 71 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 105
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 153 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 187
>gi|219660952|gb|ACL30968.1| visual system homeobox [Carassius auratus]
gi|229424351|gb|ACQ63564.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+ + + +P + W
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREM--LAMKTELPEDRIQVW 198
>gi|431892095|gb|ELK02542.1| ALX homeobox protein 1 [Pteropus alecto]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D +G+ D PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 106 DGGDGKPSDEEQ-PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 153
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 37 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 71
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 214 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYTRE 248
>gi|311256745|ref|XP_003126788.1| PREDICTED: ALX homeobox protein 1 [Sus scrofa]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|194226627|ref|XP_001493780.2| PREDICTED: ALX homeobox protein 1 [Equus caballus]
Length = 326
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|444513675|gb|ELV10425.1| Paired mesoderm homeobox protein 2B [Tupaia chinensis]
Length = 236
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
Length = 426
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 188 GGSSGDDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 240
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|441603513|ref|XP_004093153.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Nomascus leucogenys]
Length = 337
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|432904372|ref|XP_004077298.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 321
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+ + + +P + W
Sbjct: 117 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREM--LAMKTELPEDRIQVW 167
>gi|344252001|gb|EGW08105.1| ALX homeobox protein 1 [Cricetulus griseus]
Length = 295
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 78 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 132
>gi|355755063|gb|EHH58930.1| Retina and anterior neural fold homeobox protein, partial [Macaca
fascicularis]
Length = 117
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 2 GVP-SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P GE +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 17 GLPVGPATGEAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 70
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
DVS+ E E +L KRKQRR RTTFT+ QLE LE++F +T YPDV+TR+
Sbjct: 175 DVSDTESEPGLTL-KRKQRRSRTTFTAEQLEILERSFEKTQYPDVYTRE 222
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 139 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 174
>gi|16901485|gb|AAL30160.1| Rx/rax homeoprotein [Mus musculus]
Length = 181
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 66 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 100
>gi|344266437|ref|XP_003405287.1| PREDICTED: ALX homeobox protein 1 [Loxodonta africana]
Length = 326
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|170592395|ref|XP_001900954.1| hypothetical protein Bm1_47465 [Brugia malayi]
gi|158591649|gb|EDP30254.1| hypothetical protein Bm1_47465 [Brugia malayi]
Length = 154
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
S+ KRK+RR+RT FT FQ++ELEKAF HYPD++ R+
Sbjct: 32 SISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDMYAREL 70
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 162 TLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 199
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 165 TLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 202
>gi|354488799|ref|XP_003506553.1| PREDICTED: ALX homeobox protein 1 [Cricetulus griseus]
Length = 326
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 207 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 241
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 2 GVPSSGRGEEDVSEGEMED-----YASLP------------KRKQRRYRTTFTSFQLEEL 44
G PS G S G + D YA++P KRKQRR RTTFTS QL+EL
Sbjct: 56 GCPSLTPGS--CSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKEL 113
Query: 45 EKAFSRTHYPDVFTRQ 60
E+ F+ THYPD++TR+
Sbjct: 114 ERVFAETHYPDIYTRE 129
>gi|197359132|gb|ACH69782.1| retinal homeobox protein 2 [Anabarilius grahami]
Length = 284
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 97 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 132
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|444707558|gb|ELW48823.1| Homeobox protein aristaless-like 4 [Tupaia chinensis]
Length = 550
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 231 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 265
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GE +SE ED PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GEAKLSE---EDQ---PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF +THYPDVFTR+
Sbjct: 93 RRKQRRNRTTFTLQQLEELESAFVQTHYPDVFTRE 127
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + S + D + K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 157 GHDLASTLDKPDGSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 208
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 52 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 86
>gi|410967992|ref|XP_003990497.1| PREDICTED: homeobox protein aristaless-like 3 [Felis catus]
Length = 372
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 179 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 213
>gi|358337692|dbj|GAA56038.1| homeobox protein SMOX-3 [Clonorchis sinensis]
Length = 1388
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 1118 RRKQRRIRTTFTSSQLKELERAFQETHYPDIYTRE 1152
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 643 KRKQRRSRTTFTAQQLDELERAFERTQYPDIYTRE 677
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 135 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 170
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 211 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 245
>gi|322788814|gb|EFZ14382.1| hypothetical protein SINV_12755 [Solenopsis invicta]
Length = 79
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G ED + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 8 TGGGSDEELGAGCGEDINGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 64
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 536 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 592
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 131 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 166
>gi|157110497|ref|XP_001651130.1| hypothetical protein AaeL_AAEL015234 [Aedes aegypti]
gi|108868381|gb|EAT32606.1| AAEL015234-PA, partial [Aedes aegypti]
Length = 180
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S +RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 13 SFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 50
>gi|16901484|gb|AAL30159.1| Rx/rax homeoprotein [Mus musculus]
Length = 172
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 123 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 158
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 124 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 159
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 215 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 249
>gi|120975015|gb|ABM46803.1| ALX4 [Gorilla gorilla]
Length = 103
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 89
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 222 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 256
>gi|344257984|gb|EGW14088.1| Paired mesoderm homeobox protein 2A [Cricetulus griseus]
Length = 139
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 72 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 106
>gi|291389679|ref|XP_002711420.1| PREDICTED: cartilage paired-class homeoprotein 1 [Oryctolagus
cuniculus]
Length = 326
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|354503342|ref|XP_003513740.1| PREDICTED: homeobox protein aristaless-like 3-like [Cricetulus
griseus]
Length = 479
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 286 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 320
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|15146039|gb|AAK82936.1| pairberry 1 transcription factor [Schistocerca americana]
Length = 234
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 9 GEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G E + E +P KRKQRR RTTF+ QLE LE+AF RT YPDV+TR+
Sbjct: 115 GPSSADESDTESEPGIPLKRKQRRSRTTFSGDQLETLERAFQRTQYPDVYTRE 167
>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
Length = 438
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 149 DDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 196
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|260786572|ref|XP_002588331.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
gi|229273492|gb|EEN44342.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
Length = 149
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 97 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 131
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 5/59 (8%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+PS G +V E E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 113 GLPS-GPATSEVKLSEEEQ----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 166
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 138 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 173
>gi|332210907|ref|XP_003254555.1| PREDICTED: paired mesoderm homeobox protein 2A [Nomascus
leucogenys]
Length = 287
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 90 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 124
>gi|332017590|gb|EGI58290.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 398
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 165 DDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 212
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 528 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 584
>gi|426373600|ref|XP_004053685.1| PREDICTED: ALX homeobox protein 1 [Gorilla gorilla gorilla]
Length = 329
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|344296919|ref|XP_003420149.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A-like [Loxodonta africana]
Length = 262
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 66 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 100
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 128 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 163
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 139 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 173
>gi|194753694|ref|XP_001959145.1| GF12207 [Drosophila ananassae]
gi|190620443|gb|EDV35967.1| GF12207 [Drosophila ananassae]
Length = 925
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 535 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 591
>gi|338728121|ref|XP_001914967.2| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Equus caballus]
Length = 318
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ++SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 119 GARELSEEEQ------PKKKHRRIRTTFTTYQLHELERAFEKSHYPDVYSRE 164
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELEKAF++THYPDVF R+
Sbjct: 45 RRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFMRE 79
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 208 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 242
>gi|348576814|ref|XP_003474181.1| PREDICTED: retinal homeobox protein Rx-like [Cavia porcellus]
Length = 529
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|322800798|gb|EFZ21674.1| hypothetical protein SINV_07081 [Solenopsis invicta]
Length = 405
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 172 DDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 219
>gi|307189638|gb|EFN73976.1| Protein gooseberry [Camponotus floridanus]
Length = 574
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D S+ E E +L KRKQRR RTTFT QLE+LE AF RT YPDV+TR+
Sbjct: 172 DDSDTESEPGIAL-KRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTRE 219
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 525 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 581
>gi|295855150|gb|ADG46024.1| Vsx1 A2 [Carassius auratus]
gi|316936358|gb|ADU60208.1| vsx1A2 [Carassius auratus]
Length = 340
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+ + + +P + W
Sbjct: 148 KRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREM--LAMKTELPEDRIQVW 198
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 503 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 559
>gi|410965202|ref|XP_003989139.1| PREDICTED: ALX homeobox protein 1 [Felis catus]
Length = 326
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+P G +E G+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 109 GMPEKGELDE---LGDKCD-SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
Length = 902
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 534 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 590
>gi|327273654|ref|XP_003221595.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Anolis
carolinensis]
Length = 95
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 23 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 57
>gi|16905095|ref|NP_473409.1| visual system homeobox 1 [Mus musculus]
gi|25009568|sp|Q91V10.1|VSX1_MOUSE RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|15811381|gb|AAL08947.1|AF395732_1 visual system homeobox 1 [Mus musculus]
gi|15825170|gb|AAL09584.1|AF391757_1 homeodomain protein RINX [Mus musculus]
gi|15825172|gb|AAL09585.1|AF391758_1 homeodomain protein RINX [Mus musculus]
gi|16580161|gb|AAL11431.1| transcription factor VSX1 [Mus musculus]
gi|34785871|gb|AAH57647.1| Visual system homeobox 1 homolog (zebrafish) [Mus musculus]
gi|187953917|gb|AAI38461.1| Vsx1 protein [Mus musculus]
gi|223460705|gb|AAI38457.1| Vsx1 protein [Mus musculus]
Length = 363
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 166 LGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 202
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 533 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 589
>gi|357607879|gb|EHJ65721.1| hypothetical protein KGM_00017 [Danaus plexippus]
Length = 321
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
GRG D S+ E E +L KRKQRR RTTFT QL+ LE+AF RT YPDV+TR+
Sbjct: 16 GRGS-DSSDIESEPGLTL-KRKQRRSRTTFTGEQLDALERAFHRTQYPDVYTRE 67
>gi|345802097|ref|XP_854590.2| PREDICTED: uncharacterized protein LOC611786 [Canis lupus
familiaris]
Length = 782
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 589 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 623
>gi|395521290|ref|XP_003764751.1| PREDICTED: paired mesoderm homeobox protein 2A [Sarcophilus
harrisii]
Length = 294
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 90 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 124
>gi|354475607|ref|XP_003500019.1| PREDICTED: visual system homeobox 1-like [Cricetulus griseus]
Length = 318
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 113 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 147
>gi|340375161|ref|XP_003386105.1| PREDICTED: hypothetical protein LOC100637124 [Amphimedon
queenslandica]
Length = 332
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 38/58 (65%), Gaps = 9/58 (15%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
VPSS +S G E Y K KQRR+RT FTS QLEELEKAF +T YPDVF R+
Sbjct: 115 VPSS------MSIGRSEPYR---KGKQRRHRTNFTSHQLEELEKAFEKTRYPDVFMRE 163
>gi|326911636|ref|XP_003202163.1| PREDICTED: ALX homeobox protein 1-like, partial [Meleagris
gallopavo]
Length = 179
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 115 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 165
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 169 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 204
>gi|348581289|ref|XP_003476410.1| PREDICTED: visual system homeobox 1-like [Cavia porcellus]
Length = 425
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 10 EEDVSEGEMEDYAS--LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E+ +SE + + S L KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+
Sbjct: 216 EDSLSEDKSDPKVSPGLGKRKKRRHRTVFTAQQLEELEKAFREAHYPDVYARE 268
>gi|344250397|gb|EGW06501.1| Retinal homeobox protein Rx [Cricetulus griseus]
Length = 197
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 114 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 149
>gi|301778625|ref|XP_002924730.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ailuropoda melanoleuca]
Length = 278
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|84874540|gb|ABC68267.1| transcription factor Pax3/7 [Capitella teleta]
Length = 416
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RKQRR RTTF++ QLE LEKAF RTHYPD++TR+
Sbjct: 187 RKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTRE 220
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 66 RRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTRE 100
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 5 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 40
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 168 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 202
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+
Sbjct: 154 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYARE 188
>gi|328711031|ref|XP_001947663.2| PREDICTED: hypothetical protein LOC100159095 [Acyrthosiphon pisum]
Length = 578
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 2 GVPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
G P G + D + G ED A+ K+RR RT F ++QLEELE+AF +HYPDVF R+
Sbjct: 206 GSPKKGGVDGDSAAGSSEDLAN----KRRRSRTNFNTWQLEELERAFLASHYPDVFMREA 261
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 170 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 204
>gi|297275793|ref|XP_002801073.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Macaca mulatta]
gi|402903739|ref|XP_003914716.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Papio anubis]
Length = 230
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G E S G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++R+
Sbjct: 51 PGEGPAAEGGSLGPGEEA---PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSRE 104
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 133 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 168
>gi|354489841|ref|XP_003507069.1| PREDICTED: retinal homeobox protein Rx-like, partial [Cricetulus
griseus]
Length = 132
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 46 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 81
>gi|348540080|ref|XP_003457516.1| PREDICTED: visual system homeobox 1-like [Oreochromis niloticus]
Length = 306
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAWTHHLNAA 85
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+ + + +P + W + A
Sbjct: 96 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYAREM--LAMKTELPEDRIQVWFQNRRAK 153
Query: 86 F 86
+
Sbjct: 154 W 154
>gi|195133672|ref|XP_002011263.1| GI16434 [Drosophila mojavensis]
gi|193907238|gb|EDW06105.1| GI16434 [Drosophila mojavensis]
Length = 614
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 2 GVPSSGRGEEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
G+ S G G +S+ G AS P +RR+RTTFT QL ELE AF+++HYPD++ R
Sbjct: 411 GITSPGSGISSLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCR 470
Query: 60 Q 60
+
Sbjct: 471 E 471
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|334327857|ref|XP_001369519.2| PREDICTED: paired mesoderm homeobox protein 2A-like [Monodelphis
domestica]
Length = 234
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 30 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 64
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 535 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 591
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 168 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 202
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|351699331|gb|EHB02250.1| Retinal homeobox protein Rx, partial [Heterocephalus glaber]
Length = 211
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 6/52 (11%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ +SE E PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 122 GDAKLSEEEQ------PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|351695035|gb|EHA97953.1| Paired mesoderm homeobox protein 2B [Heterocephalus glaber]
Length = 300
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 536 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 592
>gi|301604045|ref|XP_002931669.1| PREDICTED: ALX homeobox protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 5 SSGRGEED-VSEGEMEDY--ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S G+ D V E+ D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 105 SPGKAMADKVDLDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|241860183|ref|XP_002416274.1| homeobox domain-containing protein, putative [Ixodes scapularis]
gi|215510488|gb|EEC19941.1| homeobox domain-containing protein, putative [Ixodes scapularis]
Length = 297
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 6 SGR--GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SGR G +D S+ E E L KRK RR RTTF++ QLE+LE+AF RT YPDV+TR+
Sbjct: 215 SGRLSGVDDDSDCESEPGIML-KRKTRRSRTTFSADQLEDLERAFERTQYPDVYTRE 270
>gi|363727605|ref|XP_425445.3| PREDICTED: ALX homeobox protein 1 [Gallus gallus]
Length = 328
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 115 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 165
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 350 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 384
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 67
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 66 TGGGSDEEIGTGCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 122
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 67
>gi|449272667|gb|EMC82474.1| ALX homeobox protein 1 [Columba livia]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|432866185|ref|XP_004070727.1| PREDICTED: homeobox protein aristaless-like 3-like [Oryzias
latipes]
Length = 369
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 167 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 201
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEK-AFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE AF RTHYPD++TR+
Sbjct: 58 DIDSEPDLPLKRKQRRSRTTFTAEQLEELEHVAFERTHYPDIYTRE 103
>gi|344250771|gb|EGW06875.1| Visual system homeobox 1 [Cricetulus griseus]
Length = 226
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAWTHHLNAA 85
KRK+RR+RT FT+ QLEELEKAF HYPDV+ R+ + + +P + W + A
Sbjct: 21 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREM--LAVKTELPEDRIQVWFQNRRAK 78
Query: 86 F 86
+
Sbjct: 79 W 79
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 528 SSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 584
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ D +G+ D RK RR RTTFT+FQL +LE+AF +T YPDVFTR+
Sbjct: 111 GDLDGMDGDPNDMGR--PRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTRE 160
>gi|113195661|ref|NP_001037829.1| homeodomain protein Phox2 [Ciona intestinalis]
gi|106647225|gb|ABF82264.1| Phox2 [Ciona intestinalis]
Length = 154
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELEK F+ THYPD++TR+
Sbjct: 43 RRKQRRIRTTFTSSQLKELEKVFAETHYPDIYTRE 77
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 6 SGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S R D+S + A K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 151 SERPGSDLSSPLEKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 205
>gi|345324653|ref|XP_001505453.2| PREDICTED: hypothetical protein LOC100073723 [Ornithorhynchus
anatinus]
Length = 732
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 533 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 567
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris
gallopavo]
Length = 228
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 32 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 67
>gi|321453987|gb|EFX65178.1| hypothetical protein DAPPUDRAFT_9094 [Daphnia pulex]
Length = 76
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 12 DVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D+S+ E E +L KRKQRR RTTF++ QLEELE++F RT YPDV+TR+
Sbjct: 1 DLSDIESEPGITL-KRKQRRSRTTFSAEQLEELERSFERTQYPDVYTRE 48
>gi|296212490|ref|XP_002752854.1| PREDICTED: ALX homeobox protein 1 [Callithrix jacchus]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|403272040|ref|XP_003927898.1| PREDICTED: ALX homeobox protein 1 [Saimiri boliviensis boliviensis]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|126339394|ref|XP_001364457.1| PREDICTED: ALX homeobox protein 1 [Monodelphis domestica]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|402589123|gb|EJW83055.1| hypothetical protein WUBG_06036 [Wuchereria bancrofti]
Length = 221
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
S+ KRK+RR+RT FT FQ++ELEKAF HYPD++ R+
Sbjct: 32 SISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDMYAREI 70
>gi|348587018|ref|XP_003479265.1| PREDICTED: homeobox protein aristaless-like 3-like [Cavia
porcellus]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|402886991|ref|XP_003906892.1| PREDICTED: ALX homeobox protein 1 [Papio anubis]
gi|355786349|gb|EHH66532.1| Cartilage homeoprotein 1 [Macaca fascicularis]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|332221029|ref|XP_003259660.1| PREDICTED: ALX homeobox protein 1 [Nomascus leucogenys]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|7106250|ref|NP_031467.1| homeobox protein aristaless-like 3 [Mus musculus]
gi|13626105|sp|O70137.1|ALX3_MOUSE RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|3041869|gb|AAC15094.1| proline-rich transcription factor ALX3 [Mus musculus]
gi|74206384|dbj|BAE24916.1| unnamed protein product [Mus musculus]
gi|146327428|gb|AAI41538.1| Aristaless-like homeobox 3 [synthetic construct]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|402855587|ref|XP_003892401.1| PREDICTED: homeobox protein aristaless-like 3 [Papio anubis]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|335307013|ref|XP_003360670.1| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 381
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 188 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 222
>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
Length = 213
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFT+ QL+ELE+AF RT YPD++TR+
Sbjct: 153 KRKQRRSRTTFTAQQLDELERAFERTQYPDIYTRE 187
>gi|268564155|ref|XP_002639030.1| C. briggsae CBR-CEH-17 protein [Caenorhabditis briggsae]
Length = 234
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 178
>gi|355564508|gb|EHH21008.1| Cartilage homeoprotein 1 [Macaca mulatta]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|341892467|gb|EGT48402.1| hypothetical protein CAEBREN_31131 [Caenorhabditis brenneri]
Length = 237
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 150 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 184
>gi|350583559|ref|XP_003125909.3| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 448
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 255 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 289
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|432090369|gb|ELK23795.1| Homeobox protein aristaless-like 4 [Myotis davidii]
Length = 187
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 37 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 71
>gi|154813201|ref|NP_008913.2| ALX homeobox protein 1 [Homo sapiens]
gi|114646088|ref|XP_509250.2| PREDICTED: ALX homeobox protein 1 [Pan troglodytes]
gi|397480872|ref|XP_003811689.1| PREDICTED: ALX homeobox protein 1 [Pan paniscus]
gi|90111820|sp|Q15699.2|ALX1_HUMAN RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|15012050|gb|AAH10923.1| ALX homeobox 1 [Homo sapiens]
gi|46946691|emb|CAD90155.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
gi|61363409|gb|AAX42385.1| cartilage paired-class homeoprotein 1 [synthetic construct]
gi|119617804|gb|EAW97398.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|291233545|ref|XP_002736712.1| PREDICTED: visual system homeobox 2-like [Saccoglossus kowalevskii]
Length = 361
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 30 RRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
RR+RT FTSFQLEELEKAF+ HYPDV+ R+ S + +P + W
Sbjct: 157 RRHRTIFTSFQLEELEKAFNEAHYPDVYAREV--LSLRTDLPEDRIQVW 203
>gi|158170|gb|AAA28837.1| BSH9 encoded protein, partial [Drosophila melanogaster]
Length = 80
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 2 GSEDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 52
>gi|300796399|ref|NP_001179482.1| homeobox protein aristaless-like 3 [Bos taurus]
gi|296489406|tpg|DAA31519.1| TPA: aristaless-like homeobox 3-like [Bos taurus]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|149638014|ref|XP_001513012.1| PREDICTED: ALX homeobox protein 1 [Ornithorhynchus anatinus]
Length = 326
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 5/51 (9%)
Query: 15 EGEMEDY-----ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+GE+++ +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 113 KGELDELGDKCDSNVTSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 34 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 69
>gi|431896467|gb|ELK05879.1| Homeobox protein aristaless-like 3 [Pteropus alecto]
Length = 315
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 118 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 152
>gi|348528067|ref|XP_003451540.1| PREDICTED: retinal homeobox protein Rx3-like [Oreochromis
niloticus]
Length = 305
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 15 EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+G++ D S K+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 98 DGKLSDDESH-KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 142
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|213624006|gb|AAI70518.1| Unknown (protein for MGC:197245) [Xenopus laevis]
gi|213625396|gb|AAI70520.1| Unknown (protein for MGC:197247) [Xenopus laevis]
Length = 335
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 134 SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 172
>gi|114639252|ref|XP_001160733.1| PREDICTED: paired mesoderm homeobox protein 2A [Pan troglodytes]
Length = 234
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 37 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 71
>gi|341883114|gb|EGT39049.1| CBN-CEH-17 protein [Caenorhabditis brenneri]
Length = 231
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 178
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|351704314|gb|EHB07233.1| Homeobox protein aristaless-like 3 [Heterocephalus glaber]
Length = 332
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 147 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 181
>gi|344275621|ref|XP_003409610.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Loxodonta africana]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|46488694|gb|AAS99587.1| aristaless [Tribolium castaneum]
Length = 46
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/28 (92%), Positives = 28/28 (100%)
Query: 33 RTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RTTFTS+QLEELEKAFSRTHYPDVFTR+
Sbjct: 1 RTTFTSYQLEELEKAFSRTHYPDVFTRE 28
>gi|587456|emb|CAA57161.1| alx3 [Mesocricetus auratus]
Length = 346
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 153 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 187
>gi|443689640|gb|ELT91996.1| hypothetical protein CAPTEDRAFT_44697, partial [Capitella teleta]
Length = 255
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 30/34 (88%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RKQRR RTTF++ QLE LEKAF RTHYPD++TR+
Sbjct: 167 RKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTRE 200
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 134 SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 172
>gi|109013372|ref|XP_001099295.1| PREDICTED: ALX homeobox 3 [Macaca mulatta]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|4138292|emb|CAA07775.1| Rx2 protein [Oryzias latipes]
Length = 188
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 6 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 41
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+P +K RRYRTTFT+ QL+ELE+ F+RTHYPD+F R+
Sbjct: 142 SMPSKK-RRYRTTFTTHQLDELERVFNRTHYPDIFLRE 178
>gi|55742834|ref|NP_001007013.1| homeobox protein aristaless-like 3 [Rattus norvegicus]
gi|40018990|gb|AAR37014.1| aristaless-related ALX3 [Rattus norvegicus]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|74096025|ref|NP_001027683.1| Prx1 protein [Ciona intestinalis]
gi|13444981|emb|CAC34833.1| Ci-Rx protein [Ciona intestinalis]
Length = 826
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT+FQL ELE+AF R+HYPDV++R+
Sbjct: 554 KKKLRRNRTTFTTFQLHELERAFERSHYPDVYSRE 588
>gi|68369878|ref|XP_695330.1| PREDICTED: homeobox protein aristaless-like 3-like [Danio rerio]
Length = 363
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 151 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 185
>gi|149025640|gb|EDL81883.1| rCG29053 [Rattus norvegicus]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G G + E + PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 18 PGDGEGTPPAATEEEQ-----PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 69
>gi|363743158|ref|XP_003642783.1| PREDICTED: homeobox protein aristaless-like 3-like [Gallus gallus]
Length = 261
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 72 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 106
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 32/36 (88%)
Query: 25 PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
PK+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 132 PKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 167
>gi|224094163|ref|XP_002196043.1| PREDICTED: ALX homeobox protein 1 [Taeniopygia guttata]
Length = 328
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 127 SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 165
>gi|109122933|ref|XP_001100945.1| PREDICTED: retina and anterior neural fold homeobox protein
2-like isoform 1 [Macaca mulatta]
gi|355702984|gb|EHH29475.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
mulatta]
gi|355755326|gb|EHH59073.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
fascicularis]
Length = 184
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G E S G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++R+
Sbjct: 5 PGEGPAAEGGSLGPGEEA---PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSRE 58
>gi|41615484|tpg|DAA03500.1| TPA_inf: HDC00631 [Drosophila melanogaster]
Length = 130
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ +RKQRR RTTFT QLEELE AF++THYPDVFTR+
Sbjct: 63 TFVRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTRE 100
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRK+RR+RT FTS QLEELEKAF HYPDV+ R+
Sbjct: 154 KRKKRRHRTVFTSHQLEELEKAFQEAHYPDVYARE 188
>gi|395821545|ref|XP_003784098.1| PREDICTED: homeobox protein aristaless-like 3 [Otolemur garnettii]
Length = 343
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 184
>gi|195163990|ref|XP_002022832.1| GL14778 [Drosophila persimilis]
gi|194104855|gb|EDW26898.1| GL14778 [Drosophila persimilis]
Length = 596
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 2 GVPSSGRGEEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
G+ S G G +S+ G AS P +RR+RTTFT QL ELE AF+++HYPD++ R
Sbjct: 393 GITSPGSGLSTLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCR 452
Query: 60 Q 60
+
Sbjct: 453 E 453
>gi|26352187|dbj|BAC39730.1| unnamed protein product [Mus musculus]
Length = 320
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 28 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 125 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 157
>gi|426218849|ref|XP_004003649.1| PREDICTED: homeobox protein aristaless-like 3 [Ovis aries]
Length = 330
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 137 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 171
>gi|27369774|ref|NP_766141.1| ALX homeobox protein 1 [Mus musculus]
gi|67460551|sp|Q8C8B0.1|ALX1_MOUSE RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|26339004|dbj|BAC33173.1| unnamed protein product [Mus musculus]
gi|30353921|gb|AAH52200.1| ALX homeobox 1 [Mus musculus]
gi|148689727|gb|EDL21674.1| cartilage homeo protein 1 [Mus musculus]
Length = 326
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 125 SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|410899545|ref|XP_003963257.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 359
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 155 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 189
>gi|58036765|emb|CAG30843.1| pairberry [Cupiennius salei]
Length = 211
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 7 GRGEEDVSEGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G G D+ + + + +P KRKQRR RTTF++ QLE LEKAF RT YPDV+TR+
Sbjct: 142 GGGTNDI-DSDCDSEPGIPLKRKQRRSRTTFSAEQLELLEKAFERTQYPDVYTRE 195
>gi|308497829|ref|XP_003111101.1| CRE-CEH-17 protein [Caenorhabditis remanei]
gi|308240649|gb|EFO84601.1| CRE-CEH-17 protein [Caenorhabditis remanei]
Length = 231
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 144 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 178
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+R QRR RTTFT QLEELE+AF++THYPDVFTR+
Sbjct: 295 RRGQRRNRTTFTVQQLEELERAFAQTHYPDVFTRE 329
>gi|1098654|gb|AAB08960.1| Cart-1 [Homo sapiens]
Length = 326
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 28 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 66 TGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 122
>gi|194211012|ref|XP_001918035.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Equus caballus]
Length = 346
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 153 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 187
>gi|194762980|ref|XP_001963612.1| GF20486 [Drosophila ananassae]
gi|190629271|gb|EDV44688.1| GF20486 [Drosophila ananassae]
Length = 731
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 2 GVPSSGRGEEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
G+ S G G +S+ G AS P +RR+RTTFT QL ELE AF+++HYPD++ R
Sbjct: 528 GITSPGSGLSTLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCR 587
Query: 60 Q 60
+
Sbjct: 588 E 588
>gi|449490110|ref|XP_002193636.2| PREDICTED: uncharacterized protein LOC100219224 [Taeniopygia
guttata]
Length = 261
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Query: 16 GEMEDYA--SLP------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G + DY LP K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 157 GSLRDYGIPELPEPLGKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 209
>gi|47228761|emb|CAG07493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 10 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 44
>gi|327272822|ref|XP_003221183.1| PREDICTED: ALX homeobox protein 1-like [Anolis carolinensis]
Length = 331
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 28 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 136 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 168
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 66 TGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 122
>gi|312072725|ref|XP_003139196.1| hypothetical protein LOAG_03611 [Loa loa]
gi|307765638|gb|EFO24872.1| hypothetical protein LOAG_03611 [Loa loa]
Length = 237
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 31/39 (79%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQC 61
++ KRK+RR+RT FT FQ++ELEKAF HYPD++ R+
Sbjct: 32 TISKRKKRRHRTIFTQFQVDELEKAFQEAHYPDIYAREL 70
>gi|6978601|ref|NP_037053.1| ALX homeobox protein 1 [Rattus norvegicus]
gi|3023581|sp|Q63087.1|ALX1_RAT RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|413751|gb|AAA40877.1| homeoprotein 1 [Rattus norvegicus]
gi|149067054|gb|EDM16787.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|149067055|gb|EDM16788.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|165970652|gb|AAI58592.1| ALX homeobox 1 [Rattus norvegicus]
Length = 326
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 22 ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 125 SNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|405961985|gb|EKC27709.1| Homeobox protein ARX [Crassostrea gigas]
Length = 442
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
Query: 5 SSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
SS +G++ G E ++S P RK RR RTTFT++QL +LE+AF +T YPDVFTR+
Sbjct: 91 SSDKGDD----GSDESFSSKP-RKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTRE 141
>gi|70571090|dbj|BAE06677.1| transcription factor protein [Ciona intestinalis]
Length = 486
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT+FQL ELE+AF R+HYPDV++R+
Sbjct: 223 KKKLRRNRTTFTTFQLHELERAFERSHYPDVYSRE 257
>gi|397478868|ref|XP_003810757.1| PREDICTED: homeobox protein aristaless-like 3, partial [Pan
paniscus]
Length = 295
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 102 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 136
>gi|395543713|ref|XP_003773758.1| PREDICTED: homeobox protein aristaless-like 4 [Sarcophilus
harrisii]
Length = 154
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 59 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 93
>gi|54694847|gb|AAV38105.1| PaxIII-PAID [Cherax destructor]
Length = 139
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 15 EGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E ++E +P KRKQRR RTTFT+ QLE LE++F +T YPDV+TR+
Sbjct: 77 ESDIESEPGIPLKRKQRRSRTTFTAEQLEVLERSFEKTQYPDVYTRE 123
>gi|148669964|gb|EDL01911.1| aristaless 3 [Mus musculus]
Length = 258
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 65 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 99
>gi|170056868|ref|XP_001864227.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876514|gb|EDS39897.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 345
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 3 VPSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+P RG D S+ E E L KRKQRR RTTF+ QLE LEKAF RT YPDV+TR+
Sbjct: 43 LPIRCRGS-DSSDIESEPGIQL-KRKQRRSRTTFSGEQLEALEKAFQRTQYPDVYTRE 98
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEGEMEDY--ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G E +M D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 97 GSEKTDLDDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 150
>gi|440909664|gb|ELR59549.1| Homeobox protein aristaless-like 3, partial [Bos grunniens mutus]
Length = 273
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 87 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 121
>gi|432103936|gb|ELK30769.1| Homeobox protein aristaless-like 3 [Myotis davidii]
Length = 354
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 161 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 195
>gi|258504658|gb|ACV72957.1| CEH-17 [Caenorhabditis remanei]
gi|258504660|gb|ACV72958.1| CEH-17 [Caenorhabditis remanei]
gi|258504662|gb|ACV72959.1| CEH-17 [Caenorhabditis remanei]
gi|258504666|gb|ACV72961.1| CEH-17 [Caenorhabditis remanei]
gi|258504668|gb|ACV72962.1| CEH-17 [Caenorhabditis remanei]
gi|258504670|gb|ACV72963.1| CEH-17 [Caenorhabditis remanei]
gi|258504672|gb|ACV72964.1| CEH-17 [Caenorhabditis remanei]
gi|258504674|gb|ACV72965.1| CEH-17 [Caenorhabditis remanei]
gi|258504676|gb|ACV72966.1| CEH-17 [Caenorhabditis remanei]
gi|258504678|gb|ACV72967.1| CEH-17 [Caenorhabditis remanei]
gi|258504680|gb|ACV72968.1| CEH-17 [Caenorhabditis remanei]
gi|258504684|gb|ACV72970.1| CEH-17 [Caenorhabditis remanei]
gi|258504686|gb|ACV72971.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 137 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 171
>gi|195402299|ref|XP_002059744.1| eyeless [Drosophila virilis]
gi|194155958|gb|EDW71142.1| eyeless [Drosophila virilis]
Length = 906
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 6 SGRGEEDVSEGEMEDYAS--------LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 57
+G GE D S G + + + KRK +R RT+FT+ Q++ LEK F RTHYPDVF
Sbjct: 465 TGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVF 524
Query: 58 TRQCGRFSRQRSMPGELCVAW 78
R+ R + + +P W
Sbjct: 525 ARE--RLAGKIGLPEARIQVW 543
>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
Length = 909
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 6 SGRGEEDVSEGEMEDYAS--------LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 57
+G GE D S G + + + KRK +R RT+FT+ Q++ LEK F RTHYPDVF
Sbjct: 465 TGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVF 524
Query: 58 TRQCGRFSRQRSMPGELCVAW 78
R+ R + + +P W
Sbjct: 525 ARE--RLAGKIGLPEARIQVW 543
>gi|395744635|ref|XP_002823601.2| PREDICTED: ALX homeobox protein 1-like, partial [Pongo abelii]
Length = 220
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 28 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVRE 163
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEGEMEDY--ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G E +M D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 102 GSEKTDLDDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 155
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 66 TGGGSDEELGAGCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 122
>gi|170062890|ref|XP_001866865.1| retinal homeobox protein [Culex quinquefasciatus]
gi|167880713|gb|EDS44096.1| retinal homeobox protein [Culex quinquefasciatus]
Length = 441
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 383 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 417
>gi|312384105|gb|EFR28914.1| hypothetical protein AND_02561 [Anopheles darlingi]
Length = 671
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 23 SLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 574 SCSKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 611
>gi|198427843|ref|XP_002120103.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 510
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 12/68 (17%)
Query: 5 SSGRGEEDV------SEGEMEDYAS------LPKRKQRRYRTTFTSFQLEELEKAFSRTH 52
++ +G+ DV S G D AS +P++KQRR RTTF S QL LE+ F RTH
Sbjct: 294 NNNKGDHDVFNPFMTSHGHHTDDASGHGGVSVPRKKQRRTRTTFNSGQLAALERVFERTH 353
Query: 53 YPDVFTRQ 60
YPD F R+
Sbjct: 354 YPDAFVRE 361
>gi|52353979|gb|AAU44354.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KR++RR+RT FTS QLEELEKAF HYPDV+ R+ + + +P + W
Sbjct: 148 KRRKRRHRTVFTSHQLEELEKAFHEAHYPDVYAREM--LAMKTELPEDRIQVW 198
>gi|351698231|gb|EHB01150.1| Paired mesoderm homeobox protein 2A, partial [Heterocephalus
glaber]
Length = 70
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTFTS QL+ELE+ F+ THYPD++TR+
Sbjct: 7 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 41
>gi|258504656|gb|ACV72956.1| CEH-17 [Caenorhabditis remanei]
gi|258504664|gb|ACV72960.1| CEH-17 [Caenorhabditis remanei]
gi|258504682|gb|ACV72969.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFTS QL+ELE+AF THYPD++TR+
Sbjct: 137 RRKQRRIRTTFTSGQLKELERAFCETHYPDIYTRE 171
>gi|198471041|ref|XP_002133645.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
gi|198145739|gb|EDY72272.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
Length = 684
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 2 GVPSSGRGEEDVSE--GEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 59
G+ S G G +S+ G AS P +RR+RTTFT QL ELE AF+++HYPD++ R
Sbjct: 481 GITSPGSGLSTLSQHAGHTPTTASCPTPARRRHRTTFTQEQLAELEAAFAKSHYPDIYCR 540
Query: 60 Q 60
+
Sbjct: 541 E 541
>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
Length = 692
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 19 EDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D +SL K KQRR RTTFTS QL ELEK F THYPD++TR+
Sbjct: 575 DDASSLADKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTRE 617
>gi|195489908|ref|XP_002092937.1| GE14464 [Drosophila yakuba]
gi|194179038|gb|EDW92649.1| GE14464 [Drosophila yakuba]
Length = 427
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 168 EDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|194886966|ref|XP_001976720.1| GG23031 [Drosophila erecta]
gi|190659907|gb|EDV57120.1| GG23031 [Drosophila erecta]
Length = 427
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 168 EDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|6469356|emb|CAA89259.1| Phox2 [Gallus gallus]
Length = 115
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTF+S QL+ELE+ F+ THYPD++TR+
Sbjct: 68 KRKQRRIRTTFSSAQLKELERVFAETHYPDIYTRE 102
>gi|195586621|ref|XP_002083072.1| GD11918 [Drosophila simulans]
gi|194195081|gb|EDX08657.1| GD11918 [Drosophila simulans]
Length = 427
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 168 EDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 7/60 (11%)
Query: 5 SSGRGEEDVS----EGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+S +GE+ S EG+ ++ A K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 570 NSEQGEKITSGSDDEGQDDNCA---KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 626
>gi|355558252|gb|EHH15032.1| hypothetical protein EGK_01064, partial [Macaca mulatta]
Length = 254
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 95
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
Query: 6 SGRGEED-----VSEGEM-----EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPD 55
S GE D VS+ EM ED RK RR RTTFT++QL +LE+AF +T YPD
Sbjct: 31 SIEGESDSKVDSVSDSEMVEESIEDLNDTRPRKIRRSRTTFTTYQLHQLERAFEKTQYPD 90
Query: 56 VFTRQ 60
VFTR+
Sbjct: 91 VFTRE 95
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 55 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 89
>gi|157122935|ref|XP_001659964.1| retinal homeobox protein [Aedes aegypti]
gi|108882964|gb|EAT47189.1| AAEL001689-PA [Aedes aegypti]
Length = 756
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 394 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 428
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTFTS+QLEELEK F +THYPDV+ R+
Sbjct: 53 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYARE 87
>gi|195064323|ref|XP_001996545.1| GH24002 [Drosophila grimshawi]
gi|193892091|gb|EDV90957.1| GH24002 [Drosophila grimshawi]
Length = 797
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 6 SGRGEEDVSEGEMEDYAS--------LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 57
+G GE D S G + + + KRK +R RT+FT+ Q++ LEK F RTHYPDVF
Sbjct: 465 TGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 524
Query: 58 TRQCGRFSRQRSMPGELCVAW 78
R+ R + + +P W
Sbjct: 525 ARE--RLAGKIGLPEARIQVW 543
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 546 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 580
>gi|348568378|ref|XP_003469975.1| PREDICTED: homeobox protein unc-4 homolog [Cavia porcellus]
Length = 619
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
Query: 17 EMEDYASLPKR-----KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E E Y+ P + K+RR RT FT +QLEELEKAF+ +HYPDVF R+
Sbjct: 171 ECESYSGDPDKESPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMRE 219
>gi|355761215|gb|EHH61775.1| hypothetical protein EGM_19864, partial [Macaca fascicularis]
Length = 258
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 95
>gi|54694845|gb|AAV38104.1| PaxIII, partial [Cherax destructor]
Length = 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 15 EGEMEDYASLP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
E ++E +P KRKQRR RTTFT+ QLE LE++F +T YPDV+TR+
Sbjct: 108 ESDIESEPGIPLKRKQRRSRTTFTAEQLEVLERSFEKTQYPDVYTRE 154
>gi|435421|gb|AAA03628.1| PAX-3, partial [Homo sapiens]
Length = 332
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
Query: 17 EMEDYASLP-KRKQRRYRTTFTSFQLEELEK-AFSRTHYPDVFTRQ 60
+++ LP KRKQRR RTTFT+ QLEELE AF RTHYPD++TR+
Sbjct: 58 DIDSEPDLPLKRKQRRSRTTFTAEQLEELEHVAFERTHYPDIYTRE 103
>gi|260829653|ref|XP_002609776.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
gi|229295138|gb|EEN65786.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
Length = 184
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT+FQL ELE+AF ++HYPDV++R+
Sbjct: 2 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSRE 36
>gi|401712698|gb|AFP99082.1| Alx1, partial [Ophiocoma wendtii]
Length = 79
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+K+RR RTTFTSFQLEE+EK F +THYPDV+ R+
Sbjct: 25 KKKRRNRTTFTSFQLEEMEKIFQKTHYPDVYCRE 58
>gi|321453989|gb|EFX65180.1| hypothetical protein DAPPUDRAFT_265088 [Daphnia pulex]
Length = 671
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
KRKQRR RTTF++ QLEELE+AF R+ YPDV+TR+
Sbjct: 359 KRKQRRSRTTFSADQLEELERAFERSQYPDVYTRE 393
>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
Length = 384
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 7 GRGEEDVSEGEMEDYASL-PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFS 65
G E +E + + A L KRK +R RT+FT+ Q+EELEK F RTHYPDVF R+ R +
Sbjct: 170 GEHEPKAAEDDEDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARE--RLA 227
Query: 66 RQRSMPGELCVAW 78
++ +P W
Sbjct: 228 QKIDLPEARIQVW 240
>gi|122053894|gb|ABM65933.1| MGC15631 [Ateles geoffroyi]
gi|124013588|gb|ABM88047.1| MGC15631 [Macaca nemestrina]
Length = 72
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G E S G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++R+
Sbjct: 5 PGEGPAAEGGSLGPGEE---APKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSRE 58
>gi|195353360|ref|XP_002043173.1| GM11922 [Drosophila sechellia]
gi|194127261|gb|EDW49304.1| GM11922 [Drosophila sechellia]
Length = 265
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 11 EDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
ED SE + E L KRKQRR RTTF++ Q++ LE+ F+RT YPDV+TR+
Sbjct: 168 EDESEDDAEPSVQL-KRKQRRSRTTFSNDQIDALERIFARTQYPDVYTRE 216
>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
Length = 503
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 5 SSGRGEEDVSE-GEMEDYASL-PKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCG 62
SS G+ D S+ GE ++ + KRK +R RT+FT+ Q+E LEK F RTHYPDVF R+
Sbjct: 250 SSDNGQGDGSQNGETDEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARE-- 307
Query: 63 RFSRQRSMPGELCVAW 78
R +++ +P W
Sbjct: 308 RLAQKIDLPEARIQVW 323
>gi|391341678|ref|XP_003745154.1| PREDICTED: aristaless-related homeobox protein-like [Metaseiulus
occidentalis]
Length = 252
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 19 EDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+D P RK RR RTTFT++QL +LE+AF +T YPDVFTR+
Sbjct: 74 DDLNDKPSRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTRE 115
>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
Length = 442
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK +R RT+FT+ Q+EELEK F RTHYPDVF R+ R +++ +P W
Sbjct: 217 KRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARE--RLAQKIDLPEARIQVW 267
>gi|403306599|ref|XP_003943814.1| PREDICTED: uncharacterized protein LOC101038211 [Saimiri
boliviensis boliviensis]
Length = 811
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P +G G G+ + + P K+RR RT FT +QLEELEKAF+ +HYPDVF R+
Sbjct: 136 PQAGPGRSASDSGDPDKES--PGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMRE 190
>gi|344254792|gb|EGW10896.1| Homeobox protein aristaless-like 3 [Cricetulus griseus]
Length = 200
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K K+RR RTTF++FQLEELEK F +THYPDV+ R+
Sbjct: 7 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYARE 41
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 5 SSGRGEEDVSEGEMEDY-ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+ G +E++ G +D + K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 66 TGGGSDEELGAGCGDDINGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 122
>gi|194224085|ref|XP_001491024.2| PREDICTED: acyl-CoA synthetase short-chain family member 1 [Equus
caballus]
Length = 967
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 17 EMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGE-LC 75
E++ + +RK+RR+ T FT+ QLEELEKAFS HYPDV+ R+ R + + +P + +
Sbjct: 19 ELKASPTPSRRKRRRHSTVFTAHQLEELEKAFSEAHYPDVYARE--RLAVKTELPEDRIQ 76
Query: 76 VAWTHHL 82
V+W L
Sbjct: 77 VSWVPFL 83
>gi|391328229|ref|XP_003738592.1| PREDICTED: protein gooseberry-neuro-like [Metaseiulus occidentalis]
Length = 478
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 24 LPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
L KRK RR RTTFT+ QLEELEKAF+ T YPDV+TR+
Sbjct: 247 LLKRKIRRSRTTFTAEQLEELEKAFAATQYPDVYTRE 283
>gi|322788828|gb|EFZ14396.1| hypothetical protein SINV_80377 [Solenopsis invicta]
Length = 294
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK RR RTTFT++QL ELEKAF T YPDVFTR+
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFTRE 99
>gi|170576749|ref|XP_001893749.1| Homeobox domain containing protein [Brugia malayi]
gi|158600048|gb|EDP37405.1| Homeobox domain containing protein [Brugia malayi]
Length = 224
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
+KQRR RTTFT+FQL ELE+AF R HYPDV+ R+ +++ +P W
Sbjct: 48 KKQRRNRTTFTTFQLHELEQAFERCHYPDVYAREL--LAQKVKLPEVRVQVW 97
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 28 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 123 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 155
>gi|324533481|gb|ADY49311.1| Paired mesoderm homeobox protein 2B [Ascaris suum]
Length = 146
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
+RKQRR RTTFT QL+ELE+AF THYPD++TR+
Sbjct: 30 RRKQRRIRTTFTPGQLKELERAFLETHYPDIYTRE 64
>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
Length = 481
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK +R RT+FT+ Q+E LEK F RTHYPDVF R+ R S++ +P W
Sbjct: 262 KRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARE--RLSQKIDLPEARIQVW 312
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 9 GEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G+ D +G+ D RK RR RTTFT+FQL +LE+AF +T YPDVFTR+
Sbjct: 78 GDLDGMDGDPNDMNR--PRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTRE 127
>gi|393911231|gb|EJD76222.1| hypothetical protein LOAG_16789 [Loa loa]
Length = 242
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
+KQRR RTTFT+FQL ELE+AF R HYPDV+ R+ +++ +P W
Sbjct: 70 KKQRRNRTTFTTFQLHELEQAFERCHYPDVYAREL--LAQKVKLPEVRVQVW 119
>gi|357608260|gb|EHJ65894.1| gooseberry [Danaus plexippus]
Length = 471
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S+ E E +L KRKQRR RTTF+ QLE LE+AF+RT YPDV+TR+
Sbjct: 171 SDTESEPGITL-KRKQRRSRTTFSGDQLEALERAFTRTQYPDVYTRE 216
>gi|332016697|gb|EGI57540.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 287
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK RR RTTFT++QL ELEKAF T YPDVFTR+
Sbjct: 57 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFTRE 90
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 31/35 (88%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
K+K RR RTTFT++QL ELE+AF ++HYPDV++R+
Sbjct: 165 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSRE 199
>gi|307170800|gb|EFN62916.1| Homeobox protein ARX [Camponotus floridanus]
Length = 382
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK RR RTTFT++QL ELEKAF T YPDVFTR+
Sbjct: 66 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFTRE 99
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 9 GEEDVSEGEMEDY--ASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G E +M D +++ K+RR+RTTFTS QLEELEK F +THYPDV+ R+
Sbjct: 97 GPEKPDLDDMTDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVRE 150
>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
Length = 436
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 7 GRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSR 66
GR ED S+ E + L KRK +R RT+FT Q+EELEK F RTHYPDVF R+ R ++
Sbjct: 194 GRKGEDESD-ETQARLRL-KRKLQRNRTSFTPQQIEELEKEFERTHYPDVFARE--RLAQ 249
Query: 67 QRSMPGELCVAW 78
+ +P W
Sbjct: 250 KIDLPEARIQVW 261
>gi|73987445|ref|XP_854816.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Canis lupus familiaris]
Length = 184
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 4 PSSGRGEEDVSEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
P G E G E+ PK+K RR RTTFT++QL +LE+AF +HYPDV++R+
Sbjct: 5 PGEGPAAEAGGPGPGEET---PKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSRE 58
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 14 SEGEMEDYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
S G+ +D +RKQRR RTTFT QLE LE F++THYPDVFTR+
Sbjct: 26 STGDFDD--GFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTRE 70
>gi|291229234|ref|XP_002734580.1| PREDICTED: retinal homeobox protein-like protein-like [Saccoglossus
kowalevskii]
Length = 279
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
K K +R RTTF+S QL+ELE+AF RTHYPD+FTR+ R +R+ +P W
Sbjct: 109 KGKPKRSRTTFSSRQLQELERAFRRTHYPDMFTRE--RLARRIGLPESRVQVW 159
>gi|313212476|emb|CBY36448.1| unnamed protein product [Oikopleura dioica]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 20 DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D L +RKQRR RTTF++ QL ELE+ F THYPD++TR+
Sbjct: 71 DNGVLERRKQRRIRTTFSTAQLRELERVFHETHYPDIYTRE 111
>gi|340709846|ref|XP_003393511.1| PREDICTED: retinal homeobox protein Rx1-like [Bombus terrestris]
Length = 304
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK RR RTTFT++QL ELEKAF T YPDVFTR+
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFTRE 107
>gi|156378586|ref|XP_001631223.1| predicted protein [Nematostella vectensis]
gi|156218259|gb|EDO39160.1| predicted protein [Nematostella vectensis]
Length = 106
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
K K+RR+RT FT++QLEELEKAF +HYPDV+ R+ S + +P + W
Sbjct: 2 KAKKRRHRTIFTNYQLEELEKAFKESHYPDVYARE--NLSLKIDLPEDRIQVW 52
>gi|58036767|emb|CAG30844.1| pairberry [Cupiennius salei]
Length = 181
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 4/49 (8%)
Query: 16 GEMEDYASLP----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
G D S P KRKQRR RTTFT+ QL+ELE+AF ++ YPD++TR+
Sbjct: 133 GTASDCDSEPGLTLKRKQRRSRTTFTAAQLDELERAFEKSQYPDIYTRE 181
>gi|110749929|ref|XP_001119902.1| PREDICTED: retinal homeobox protein Rx2 [Apis mellifera]
Length = 304
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/34 (73%), Positives = 28/34 (82%)
Query: 27 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
RK RR RTTFT++QL ELEKAF T YPDVFTR+
Sbjct: 74 RKVRRSRTTFTTYQLHELEKAFGNTQYPDVFTRE 107
>gi|56694810|gb|AAW23067.1| Arix [Oikopleura dioica]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 20 DYASLPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQ 60
D L +RKQRR RTTF++ QL ELE+ F THYPD++TR+
Sbjct: 71 DNGVLERRKQRRIRTTFSTAQLRELERVFHETHYPDIYTRE 111
>gi|390349964|ref|XP_003727316.1| PREDICTED: paired box protein Pax-6-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 26 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTRQCGRFSRQRSMPGELCVAW 78
KRK +R RT+FT+ Q+EELEK F RTHYPDVF R+ R +++ +P W
Sbjct: 43 KRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARE--RLAQKIDLPEARIQVW 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,467,982,808
Number of Sequences: 23463169
Number of extensions: 49799817
Number of successful extensions: 119198
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3846
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 115132
Number of HSP's gapped (non-prelim): 4287
length of query: 91
length of database: 8,064,228,071
effective HSP length: 61
effective length of query: 30
effective length of database: 6,632,974,762
effective search space: 198989242860
effective search space used: 198989242860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)