BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3738
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VBZ3|CLPT1_MOUSE Cleft lip and palate transmembrane protein 1 homolog OS=Mus
musculus GN=Clptm1 PE=1 SV=1
Length = 664
Score = 152 bits (385), Expect = 5e-37, Method: Composition-based stats.
Identities = 72/97 (74%), Positives = 86/97 (88%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
+QDS+K ALLETSPYLLA T+IVSI+HSVFE LAFKNDIQFWN+RQSLEGLSVRSVFF V
Sbjct: 341 EQDSVKVALLETSPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGV 400
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKI 134
FQS VVLLY+LDN+ N ++++S F+ V I+LWKI K+
Sbjct: 401 FQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
>sp|Q2NL17|CLPT1_BOVIN Cleft lip and palate transmembrane protein 1 homolog OS=Bos taurus
GN=CLPTM1 PE=2 SV=1
Length = 670
Score = 151 bits (382), Expect = 9e-37, Method: Composition-based stats.
Identities = 71/97 (73%), Positives = 86/97 (88%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
+QDS+K ALLET+PYLLA T+IVSI+HSVFE LAFKNDIQFWN+RQSLEGLSVRSVFF V
Sbjct: 341 EQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGV 400
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKI 134
FQS VVLLY+LDN+ N ++++S F+ V I+LWKI K+
Sbjct: 401 FQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
>sp|O96005|CLPT1_HUMAN Cleft lip and palate transmembrane protein 1 OS=Homo sapiens
GN=CLPTM1 PE=1 SV=1
Length = 669
Score = 151 bits (382), Expect = 1e-36, Method: Composition-based stats.
Identities = 71/97 (73%), Positives = 86/97 (88%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
+QDS+K ALLET+PYLLA T+IVSI+HSVFE LAFKNDIQFWN+RQSLEGLSVRSVFF V
Sbjct: 341 EQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGV 400
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKI 134
FQS VVLLY+LDN+ N ++++S F+ V I+LWKI K+
Sbjct: 401 FQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKV 437
>sp|Q6DEL2|CLPT1_DANRE Cleft lip and palate transmembrane protein 1 homolog OS=Danio rerio
GN=clptm1 PE=2 SV=1
Length = 631
Score = 144 bits (364), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/97 (67%), Positives = 84/97 (86%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
DQDS+K ALLET+PYLL T++VSI+HS+FE LAFKNDIQFWN+RQSLEGLSVRS+ F V
Sbjct: 339 DQDSVKVALLETNPYLLGLTIVVSIVHSIFEFLAFKNDIQFWNSRQSLEGLSVRSIIFGV 398
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINKI 134
FQS+VVLLY+LDN+ N ++++S F+ + I+ WKI K+
Sbjct: 399 FQSLVVLLYILDNETNFVVQVSVFIGLLIDFWKITKV 435
>sp|Q54RJ1|CNRB_DICDI CLPTM1-like membrane protein cnrB OS=Dictyostelium discoideum
GN=cnrB PE=3 SV=1
Length = 619
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%)
Query: 40 DSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNVFQ 99
D K L + P++L T+IVS+LH++FE LAFKNDIQFW N +S+EGLSV+++ N
Sbjct: 312 DEFKRMLTDNDPWILGLTLIVSVLHTIFEFLAFKNDIQFWKNNKSMEGLSVKTITLNCVC 371
Query: 100 SVVVLLYVLDNDANTLIRISCFVSVGIELWKINKIGT 136
++ LY+LDN+ + +I S +E WK+ K T
Sbjct: 372 MGIIFLYLLDNETSYMILASSGFGFLVEFWKLGKAMT 408
>sp|Q8BXA5|CLP1L_MOUSE Cleft lip and palate transmembrane protein 1-like protein OS=Mus
musculus GN=Clptm1l PE=2 SV=1
Length = 539
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
D D LK ++T+ YLLA T V+ H +F+ LAFK+DI FW ++S+ G+S ++V +
Sbjct: 272 DADELKGIFVDTNLYLLALTFFVAAFHLLFDFLAFKSDISFWKKKKSMIGMSTKAVLWRC 331
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
F +VV+ L++LD + L+ I V IELWK+ K
Sbjct: 332 FSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKK 367
>sp|Q96KA5|CLP1L_HUMAN Cleft lip and palate transmembrane protein 1-like protein OS=Homo
sapiens GN=CLPTM1L PE=1 SV=1
Length = 538
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
D D +K ++T+ Y LA T V+ H +F+ LAFKNDI FW ++S+ G+S ++V +
Sbjct: 271 DADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRC 330
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
F +VV+ L++LD + L+ + V IELWK+ K
Sbjct: 331 FSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKK 366
>sp|Q5R7B1|CLP1L_PONAB Cleft lip and palate transmembrane protein 1-like protein OS=Pongo
abelii GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
D D +K ++T+ Y LA T V+ H +F+ LAFKNDI FW ++S+ G+S ++V +
Sbjct: 271 DADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRC 330
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
F +VV+ L++LD + L+ + V IELWK+ K
Sbjct: 331 FSTVVIFLFLLDEQTSLLVLVPAGVGAAIELWKVKK 366
>sp|Q5ZKJ0|CLP1L_CHICK Cleft lip and palate transmembrane protein 1-like protein OS=Gallus
gallus GN=CLPTM1L PE=2 SV=1
Length = 536
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
D D +K ++T+ Y LA T V+ H +F+ LAFKNDI FW ++S+ G+S ++V +
Sbjct: 271 DADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKRSMIGMSTKAVLWRC 330
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
F +VV+ L++LD + L+ I + IELWK+ K
Sbjct: 331 FSTVVIFLFLLDEQTSLLVLIPAGIGAVIELWKVKK 366
>sp|Q6DHU1|CLP1L_DANRE Cleft lip and palate transmembrane protein 1-like protein OS=Danio
rerio GN=clptm1l PE=2 SV=1
Length = 538
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%)
Query: 34 FVFPDQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSV 93
F D D +K ++T+ Y LA T V+ H +F+ LAFKNDI FW +++S+ G+S ++V
Sbjct: 267 FTEKDADEIKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKHKKSMVGMSSKAV 326
Query: 94 FFNVFQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
+ F ++V+ LY+LD + L+ + + IE+WK+ K
Sbjct: 327 LWRCFSTIVIFLYLLDEQTSLLVLVPAGIGSLIEVWKVKK 366
>sp|A2VE61|CLP1L_BOVIN Cleft lip and palate transmembrane protein 1-like protein OS=Bos
taurus GN=CLPTM1L PE=2 SV=1
Length = 538
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 38 DQDSLKEALLETSPYLLAATVIVSILHSVFELLAFKNDIQFWNNRQSLEGLSVRSVFFNV 97
D D +K ++T+ Y LA T V+ H +F+ LAFKNDI FW ++S+ G+S ++V +
Sbjct: 271 DADEVKGIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRC 330
Query: 98 FQSVVVLLYVLDNDANTLIRISCFVSVGIELWKINK 133
F +VV+ L++LD + + + + IELWK+ K
Sbjct: 331 FSTVVIFLFLLDEQTSLPVLVPAGIGAAIELWKVKK 366
>sp|O25242|DPO3B_HELPY DNA polymerase III subunit beta OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=dnaN PE=3 SV=1
Length = 374
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 7 NVLFVISSATAEATTTFLLSCLTPSCPFVFPDQDSLKE 44
N F + + A TT F+L C PS PF+ Q+SL E
Sbjct: 321 NAKFFLEALNALGTTQFVLRCNEPSSPFLI--QESLDE 356
>sp|O74377|SULH1_SCHPO Probable sulfate permease C3H7.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC3H7.02 PE=3 SV=1
Length = 877
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 52 YLLAATVIVSILHSVFEL-LAFKNDIQFWNNRQSLEGL-SVRSVFFNVFQSV 101
Y+ A + I+HSVF+L + ++ + FW Q LE L + +VF +VF S+
Sbjct: 483 YIPNAVLSAVIIHSVFDLIIPWRQTLLFW-RMQPLEALIFICAVFVSVFSSI 533
>sp|Q9ZLX4|DPO3B_HELPJ DNA polymerase III subunit beta OS=Helicobacter pylori (strain J99)
GN=dnaN PE=3 SV=1
Length = 374
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 7 NVLFVISSATAEATTTFLLSCLTPSCPFVFPDQDSLKEALLETSPYLLA 55
N F + + A TT F+L C PS PF+ ++E L E +L A
Sbjct: 321 NAKFFLEALNALGTTQFVLKCNEPSSPFL------IQEPLDEKQSHLNA 363
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,389,942
Number of Sequences: 539616
Number of extensions: 1351501
Number of successful extensions: 3995
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3982
Number of HSP's gapped (non-prelim): 15
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)