Query psy3738
Match_columns 136
No_of_seqs 111 out of 176
Neff 3.5
Searched_HMMs 13730
Date Sat Aug 17 00:16:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3738.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3738hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x0ha1 d.332.1.1 (A:8-107) Ra 23.1 31 0.0022 22.7 3.0 50 2-53 24-75 (100)
2 d1vqoo1 c.12.1.1 (O:1-115) Rib 17.3 30 0.0022 23.4 1.9 27 48-81 2-28 (115)
3 d1l5aa2 c.43.1.2 (A:175-424) V 13.1 15 0.0011 24.9 -0.6 11 72-82 3-13 (250)
4 d1ucta1 b.1.1.4 (A:2-100) Ig a 12.9 46 0.0034 19.9 1.8 19 8-26 62-80 (99)
5 d1nkra1 b.1.1.4 (A:6-101) Kill 11.9 95 0.0069 18.9 3.2 24 8-31 57-80 (96)
6 d1wi3a_ a.4.1.1 (A:) DNA-bindi 11.5 27 0.002 20.8 0.3 23 32-54 12-34 (71)
7 d1lghb_ f.3.1.1 (B:) Light-har 10.8 51 0.0037 19.0 1.4 32 32-66 4-35 (43)
8 d1ugna2 b.1.1.4 (A:98-195) Lig 10.8 74 0.0054 19.4 2.3 25 8-32 60-84 (98)
9 d1olla2 b.1.1.4 (A:96-188) Lig 10.3 65 0.0048 19.6 1.9 20 7-26 53-72 (93)
10 d1ugna1 b.1.1.4 (A:2-97) Ligan 9.7 53 0.0039 20.0 1.3 25 6-30 55-79 (96)
No 1
>d1x0ha1 d.332.1.1 (A:8-107) Ras GTPase-activating-like protein IQGAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.14 E-value=31 Score=22.74 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=34.1
Q ss_pred CccceeEEEEEecccccccceeeehhcCCCCCCC--CCChHHHHHHHhccChhH
Q psy3738 2 NNKWKNVLFVISSATAEATTTFLLSCLTPSCPFV--FPDQDSLKEALLETSPYL 53 (136)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~--~~d~DeiK~~~leTNpyl 53 (136)
.+.|+|+.|.||| .+..|.|.+.-.....+.. +=.+|++=++=-|..+.+
T Consensus 24 ~~~~~~v~f~iS~--s~evGvF~i~~~~~~i~~~~~~l~ldDLL~~Qye~~~~~ 75 (100)
T d1x0ha1 24 VNQFKNVIFEISP--TEEVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVM 75 (100)
T ss_dssp TGGGGGCEEEEEC--CSSSSCEEEEEESSCCCSCCEEECHHHHHHHHHHCCCEE
T ss_pred hhhcccEEEEEec--CCCceEEEEEEEeCCeeeeeEEEeHHHHHHHhHcCceee
Confidence 4679999999984 2347888887665544443 456788777766666554
No 2
>d1vqoo1 c.12.1.1 (O:1-115) Ribosomal protein L18e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=17.26 E-value=30 Score=23.36 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=20.9
Q ss_pred ccChhHHHHHHHHHHHHHHHHHhhccchhhhhhc
Q psy3738 48 ETSPYLLAATVIVSILHSVFELLAFKNDIQFWNN 81 (136)
Q Consensus 48 eTNpylL~~T~~VS~LHsvFefLAFKNDI~FWr~ 81 (136)
-||||+.- |.....++|=+||-.||+.
T Consensus 2 kTNp~l~~-------lI~~lk~~sr~~~a~iwk~ 28 (115)
T d1vqoo1 2 KTNPRLSS-------LIADLKSAARSSGGAVWGD 28 (115)
T ss_dssp CCCHHHHH-------HHHHHHHHHHHSSCSHHHH
T ss_pred CCCHHHHH-------HHHHHHHHHhhhcCHHHHH
Confidence 48999854 3556778899999999974
No 3
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}
Probab=13.09 E-value=15 Score=24.91 Aligned_cols=11 Identities=36% Similarity=0.851 Sum_probs=7.9
Q ss_pred ccchhhhhhcC
Q psy3738 72 FKNDIQFWNNR 82 (136)
Q Consensus 72 FKNDI~FWr~k 82 (136)
|++|.+||+++
T Consensus 3 ~~~d~~yW~~~ 13 (250)
T d1l5aa2 3 YWQDKQFWQGY 13 (250)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56777888765
No 4
>d1ucta1 b.1.1.4 (A:2-100) Ig alpha Fc receptor, FCARI (CD89) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.92 E-value=46 Score=19.93 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=16.3
Q ss_pred EEEEEecccccccceeeeh
Q psy3738 8 VLFVISSATAEATTTFLLS 26 (136)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~ 26 (136)
.-|.|+++++...|++|-+
T Consensus 62 a~F~l~~vt~~~~G~Y~C~ 80 (99)
T d1ucta1 62 PEFVIDHMDANKAGRYQCQ 80 (99)
T ss_dssp CEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCHHHCceEEEE
Confidence 4699999999999999754
No 5
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human (Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Probab=11.92 E-value=95 Score=18.94 Aligned_cols=24 Identities=21% Similarity=0.134 Sum_probs=19.6
Q ss_pred EEEEEecccccccceeeehhcCCC
Q psy3738 8 VLFVISSATAEATTTFLLSCLTPS 31 (136)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~ 31 (136)
+-|.|+++++...|+||-+.-...
T Consensus 57 a~F~l~~v~~~~~G~Y~C~y~~~~ 80 (96)
T d1nkra1 57 ANFSISRMTQDLAGTYRCYGSVTH 80 (96)
T ss_dssp EEEEESSCCGGGCEEEEEEEEBTT
T ss_pred EEEEEcccCcccCeEEEEEEEcCC
Confidence 679999999999999986555444
No 6
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.50 E-value=27 Score=20.84 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=18.9
Q ss_pred CCCCCCChHHHHHHHhccChhHH
Q psy3738 32 CPFVFPDQDSLKEALLETSPYLL 54 (136)
Q Consensus 32 ~~f~~~d~DeiK~~~leTNpylL 54 (136)
..|+++.+..++..|-++|||.=
T Consensus 12 ~~~t~~Q~~~Le~~F~~~~~~P~ 34 (71)
T d1wi3a_ 12 TKISLEALGILQSFIHDVGLYPD 34 (71)
T ss_dssp CCCCSHHHHHHHHHHHHHCSCCC
T ss_pred ccCCHHHHHHHHHHHHHhcCCCC
Confidence 46788889999999988888764
No 7
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=10.81 E-value=51 Score=18.96 Aligned_cols=32 Identities=9% Similarity=0.192 Sum_probs=22.7
Q ss_pred CCCCCCChHHHHHHHhccChhHHHHHHHHHHHHHH
Q psy3738 32 CPFVFPDQDSLKEALLETSPYLLAATVIVSILHSV 66 (136)
Q Consensus 32 ~~f~~~d~DeiK~~~leTNpylL~~T~~VS~LHsv 66 (136)
-|.+|+|..|+-+.+.++ +.+++.+..+-|.+
T Consensus 4 sGLT~~EA~EfH~~~~~g---~~~F~~iAvvAHiL 35 (43)
T d1lghb_ 4 SGLTEEEAIAVHDQFKTT---FSAFIILAAVAHVL 35 (43)
T ss_dssp SSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 478899999999999985 34444455555643
No 8
>d1ugna2 b.1.1.4 (A:98-195) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.76 E-value=74 Score=19.39 Aligned_cols=25 Identities=4% Similarity=0.116 Sum_probs=20.1
Q ss_pred EEEEEecccccccceeeehhcCCCC
Q psy3738 8 VLFVISSATAEATTTFLLSCLTPSC 32 (136)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~ 32 (136)
+.|.|+++++.-.|+||-+.-.+..
T Consensus 60 a~F~l~~v~~~~~G~Y~C~y~~~~~ 84 (98)
T d1ugna2 60 AIFSVGPVSPSRRWWYRCYAYDSNS 84 (98)
T ss_dssp EEEEECCCCTTSCEEEEEEEECTTS
T ss_pred EEEEeeecccCCCeEEEEeeEcCCC
Confidence 6799999999999999866554443
No 9
>d1olla2 b.1.1.4 (A:96-188) Ligand binding domain of NK receptor NKp46 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.27 E-value=65 Score=19.65 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=17.1
Q ss_pred eEEEEEecccccccceeeeh
Q psy3738 7 NVLFVISSATAEATTTFLLS 26 (136)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~ 26 (136)
..-|.|+++++.-.|++|-+
T Consensus 53 ~a~F~i~~v~~~~~G~Y~C~ 72 (93)
T d1olla2 53 QAEFPLGPVTTAHRGTYRCF 72 (93)
T ss_dssp EEEEEEEECCGGGCEEEEEE
T ss_pred eeEEEecccChhcCceEEEE
Confidence 46799999999999999754
No 10
>d1ugna1 b.1.1.4 (A:2-97) Ligand binding domain of lir-1 (ilt2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.68 E-value=53 Score=20.04 Aligned_cols=25 Identities=28% Similarity=0.114 Sum_probs=19.9
Q ss_pred eeEEEEEecccccccceeeehhcCC
Q psy3738 6 KNVLFVISSATAEATTTFLLSCLTP 30 (136)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~ 30 (136)
....|.|+++++.-.|+||-++-.+
T Consensus 55 ~~a~F~i~~v~~~~~G~Y~C~y~~~ 79 (96)
T d1ugna1 55 KKGQFPIPSITWEHTGRYRCYYGSD 79 (96)
T ss_dssp TTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEEEEEecCHHHCCeEEEEEeCC
Confidence 3468999999999999998665433
Done!