BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3752
(1012 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|329912037|ref|ZP_08275648.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium
IMCC9480]
gi|327545760|gb|EGF30894.1| SSU ribosomal protein S2p (SAe) [Oxalobacteraceae bacterium
IMCC9480]
Length = 248
Score = 348 bits (894), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 155/236 (65%), Positives = 196/236 (83%), Gaps = 6/236 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHI+NLEKTL MY+ A++YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTLAMYQDAMKYIQQLSSNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAGMPF+DQRWLGG+LTNFKTIKTSI+RLKEM+ I +GS+
Sbjct: 67 LMVGTKRQAREIVAAEAARAGMPFVDQRWLGGMLTNFKTIKTSIKRLKEMEASIADGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKE L+F R+ +KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEGLMFEREMIKLQKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKK 410
DTNHSP+G+ Y+IPGNDDS+K+I LY +G+ DA L E R+ +L ++E K
Sbjct: 187 DTNHSPEGVTYIIPGNDDSSKAIMLYARGVADAIL------EGRASSLNDVVEAVK 236
>gi|152980757|ref|YP_001353748.1| 30S ribosomal protein S2 [Janthinobacterium sp. Marseille]
gi|151280834|gb|ABR89244.1| small subunit ribosomal protein S2 [Janthinobacterium sp.
Marseille]
Length = 264
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 154/230 (66%), Positives = 198/230 (86%), Gaps = 1/230 (0%)
Query: 164 PSYMESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRY 223
P + S+T E +++AGVHFGHQTRFWNPKM+ +IFGHRN+IHI+NLEKT+ MY++A++Y
Sbjct: 13 PGDIMSVTMRE-MLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKY 71
Query: 224 IYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKE 283
I QL ++GT+LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKE
Sbjct: 72 IRQLSSNRGTVLFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKE 131
Query: 284 MDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEA 343
M+ I +GS++KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA
Sbjct: 132 MEASIEDGSVQKLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEA 191
Query: 344 IKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
KL IP+IGVVDTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 192 AKLGIPVIGVVDTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 241
>gi|340786521|ref|YP_004751986.1| 30S ribosomal protein S2 [Collimonas fungivorans Ter331]
gi|340551788|gb|AEK61163.1| SSU ribosomal protein S2p (SAe) [Collimonas fungivorans Ter331]
Length = 250
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 190/219 (86%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY++A++YI QL ++G +
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAMKYIRQLSSNRGNI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++A EA R+G PF+DQRWLGG+LTNFKTIKTSI+RLKEM+ I +GS+
Sbjct: 67 LFVGTKRQAREIVAAEAARSGSPFVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKE L+F R+ +KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEGLMFQRELIKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSPDG+ YVIPGNDDS+K+IALY +G+ DA L+ +
Sbjct: 187 DTNHSPDGVTYVIPGNDDSSKAIALYARGVADAILEGRA 225
>gi|209573709|sp|A6SZQ1.2|RS2_JANMA RecName: Full=30S ribosomal protein S2
Length = 248
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 193/219 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRN+IHI+NLEKT+ MY++A++YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSSNRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKEM+ I +GS++
Sbjct: 67 LFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDGSVQ 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 225
>gi|134094560|ref|YP_001099635.1| 30S ribosomal protein S2 [Herminiimonas arsenicoxydans]
gi|166225279|sp|A4G4S1.1|RS2_HERAR RecName: Full=30S ribosomal protein S2
gi|133738463|emb|CAL61508.1| 30S ribosomal subunit protein S2 [Herminiimonas arsenicoxydans]
Length = 248
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 192/219 (87%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRN+IHI+NLEKTL MY++A++YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLSSNRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKE++ + +GS+
Sbjct: 67 LFVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALVEDGSME 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G+ Y+IPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRA 225
>gi|398836105|ref|ZP_10593454.1| ribosomal protein S2 [Herbaspirillum sp. YR522]
gi|398213936|gb|EJN00522.1| ribosomal protein S2 [Herbaspirillum sp. YR522]
Length = 247
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 191/219 (87%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL ++++A +Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGLFQEATKYVRQLSSNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKTIKTSI+RLK+M+ I +GS+
Sbjct: 67 LFVGTKRQAREILAGEAQRAGVPFVDQRWLGGMLTNFKTIKTSIKRLKDMEASIEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKE LLF R+ KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEGLLFRRELEKLQKSIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G+NY+IPGNDDSAK+IALY +GI DA L+ +
Sbjct: 187 DTNHSPEGVNYIIPGNDDSAKAIALYARGIADAVLEGRA 225
>gi|237747785|ref|ZP_04578265.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13]
gi|229379147|gb|EEO29238.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes OXCC13]
Length = 246
Score = 342 bits (877), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 153/237 (64%), Positives = 193/237 (81%), Gaps = 6/237 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY A+ YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +IA EA RAGMPF+DQRWLGG+LTNFKTIKTSI+RLK+M+ I +GS+
Sbjct: 67 LMVGTKRQARDIIAAEAQRAGMPFVDQRWLGGMLTNFKTIKTSIKRLKDMEAAIEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKE L+F R+ KL + IGGIK+MN +PDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KMSKKEGLMFSREVEKLQKSIGGIKDMNGLPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
DTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L E R+ + ++E K
Sbjct: 187 DTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAIL------EGRANAMHDVLEAAKG 237
>gi|409405990|ref|ZP_11254452.1| 30S ribosomal protein S2 [Herbaspirillum sp. GW103]
gi|386434539|gb|EIJ47364.1| 30S ribosomal protein S2 [Herbaspirillum sp. GW103]
Length = 259
Score = 338 bits (867), Expect = 9e-90, Method: Composition-based stats.
Identities = 152/218 (69%), Positives = 193/218 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY++A++Y+ QL ++GT+
Sbjct: 20 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAVKYVRQLSANRGTI 79
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKTIKTSI+RLK+M+ + +GS+
Sbjct: 80 LFVGTKRQARDILAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAMEDGSVE 139
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEALLF R+Q KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 140 KLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 199
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ YVIPGNDDSAK+IALY +G+ DA L+ +
Sbjct: 200 DTNHSPEGVTYVIPGNDDSAKAIALYARGMADAVLEGR 237
>gi|300311493|ref|YP_003775585.1| 30S ribosomal protein S2 [Herbaspirillum seropedicae SmR1]
gi|124483406|emb|CAM32576.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae]
gi|300074278|gb|ADJ63677.1| 30S ribosomal subunit protein S2 [Herbaspirillum seropedicae SmR1]
Length = 246
Score = 337 bits (864), Expect = 2e-89, Method: Composition-based stats.
Identities = 152/218 (69%), Positives = 192/218 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY++A +Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAQKYVRQLSANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKTIKTSI+RLK+M+ + +GS+
Sbjct: 67 LFVGTKRQAREILAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAVEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEALLF R+Q KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ YVIPGNDDSAK+IALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVTYVIPGNDDSAKAIALYARGMADAVLEGR 224
>gi|415953991|ref|ZP_11557319.1| 30S ribosomal subunit protein S2 [Herbaspirillum frisingense GSF30]
gi|407757195|gb|EKF67231.1| 30S ribosomal subunit protein S2 [Herbaspirillum frisingense GSF30]
Length = 259
Score = 336 bits (862), Expect = 3e-89, Method: Composition-based stats.
Identities = 152/218 (69%), Positives = 192/218 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY++A +Y+ QL ++GT+
Sbjct: 20 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEAQKYVRQLSSNRGTI 79
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKTIKTSI+RLK+M+ + +GS+
Sbjct: 80 LFVGTKRQAREILAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAVEDGSVE 139
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEALLF R+Q KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 140 KLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 199
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ YVIPGNDDSAK+IALY +G+ DA L+ +
Sbjct: 200 DTNHSPEGVTYVIPGNDDSAKAIALYARGMADAVLEGR 237
>gi|399017266|ref|ZP_10719463.1| ribosomal protein S2 [Herbaspirillum sp. CF444]
gi|398104037|gb|EJL94194.1| ribosomal protein S2 [Herbaspirillum sp. CF444]
Length = 250
Score = 335 bits (860), Expect = 6e-89, Method: Composition-based stats.
Identities = 153/218 (70%), Positives = 191/218 (87%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY++A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLGMYQEALKYVRQLSSNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +A EA RAG+P++DQRWLGG+LTNFKTIKTSI+RLK+M+ I +GS
Sbjct: 67 LFVGTKRQARETVAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAAIADGSNE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEALLF R+Q KL + IGGIK+M IPDAIF+IDVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALLFSREQEKLQKAIGGIKDMGGIPDAIFVIDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ YVIPGNDDSAK+IALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVTYVIPGNDDSAKAIALYARGVADAILEGR 224
>gi|395762168|ref|ZP_10442837.1| 30S ribosomal protein S2 [Janthinobacterium lividum PAMC 25724]
Length = 250
Score = 330 bits (847), Expect = 2e-87, Method: Composition-based stats.
Identities = 148/218 (67%), Positives = 192/218 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT+ MY+ A++++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTMAMYQDAMKHVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +IA EA RAG+PF+DQRWLGG+LTNFKTIKTSI+RLK+M++ I +GSI
Sbjct: 67 LMVGTKRQAREIIAAEAQRAGVPFVDQRWLGGMLTNFKTIKTSIKRLKDMEVMIEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+ +KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFSREMIKLQKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+N+VIPGNDDS+K+I LY +G+ DA ++ +
Sbjct: 187 DTNHSPEGVNFVIPGNDDSSKAIMLYARGVADAIIEGR 224
>gi|237745595|ref|ZP_04576075.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS]
gi|229376946|gb|EEO27037.1| 30S ribosomal subunit protein S2 [Oxalobacter formigenes HOxBLS]
Length = 245
Score = 328 bits (842), Expect = 7e-87, Method: Composition-based stats.
Identities = 147/218 (67%), Positives = 188/218 (86%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL MY A+ YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLAMYNDAMNYIRQLSANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +IA+EA RAGMP++DQRWLGG+LTNFKTI+TSI+RLK+M+ I +G++
Sbjct: 67 LMVGTKRQARDIIASEAQRAGMPYVDQRWLGGMLTNFKTIRTSIKRLKDMEAAIEDGTVD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKE L+F R+ KL + IGGIK+MN +PDAIF++DVGYHKGAV+EA KL IP+IGVV
Sbjct: 127 KMSKKEGLMFQREVAKLQKAIGGIKDMNGLPDAIFVVDVGYHKGAVTEAQKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGLAYVIPGNDDSSKAIQLYARGVADAILEGR 224
>gi|161524430|ref|YP_001579442.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616]
gi|160341859|gb|ABX14945.1| ribosomal protein S2 [Burkholderia multivorans ATCC 17616]
Length = 309
Score = 327 bits (839), Expect = 2e-86, Method: Composition-based stats.
Identities = 146/239 (61%), Positives = 194/239 (81%), Gaps = 1/239 (0%)
Query: 155 KYAERIFSRPSY-MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKT 213
+Y R+ ++PS+ + ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT
Sbjct: 49 RYGSRLKTQPSWRIYMAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKT 108
Query: 214 LYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKT 273
L MY A++Y+ QL ++GT+LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT
Sbjct: 109 LPMYNDALKYVRQLAANRGTILFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKT 168
Query: 274 IKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDV 333
+K SI+RLK+M+ + G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DV
Sbjct: 169 LKVSIKRLKDMEAAVEAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDV 228
Query: 334 GYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
GYHK AV+EA KL +P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 229 GYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 287
>gi|241662943|ref|YP_002981303.1| 30S ribosomal protein S2 [Ralstonia pickettii 12D]
gi|309782137|ref|ZP_07676867.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA]
gi|404377830|ref|ZP_10982930.1| 30S ribosomal protein S2 [Ralstonia sp. 5_2_56FAA]
gi|240864970|gb|ACS62631.1| ribosomal protein S2 [Ralstonia pickettii 12D]
gi|308919203|gb|EFP64870.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA]
gi|348612949|gb|EGY62554.1| 30S ribosomal protein S2 [Ralstonia sp. 5_2_56FAA]
Length = 247
Score = 325 bits (833), Expect = 8e-86, Method: Composition-based stats.
Identities = 146/218 (66%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKTL MY+ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMPF+D RWLGG+LTNFKT+KTSI+RLK+M++ G+
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKEAGATE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|254252059|ref|ZP_04945377.1| ribosomal protein S2 [Burkholderia dolosa AUO158]
gi|124894668|gb|EAY68548.1| ribosomal protein S2 [Burkholderia dolosa AUO158]
Length = 318
Score = 324 bits (831), Expect = 1e-85, Method: Composition-based stats.
Identities = 144/239 (60%), Positives = 193/239 (80%), Gaps = 1/239 (0%)
Query: 155 KYAERIFSRPSY-MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKT 213
+Y R+ ++PS+ + ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT
Sbjct: 58 RYGSRLKTQPSWRIHMAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKT 117
Query: 214 LYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKT 273
L M+ A +Y+ QL ++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT
Sbjct: 118 LPMFTDAQKYVRQLAANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKT 177
Query: 274 IKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDV 333
+K SI+RLK+M+ + G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DV
Sbjct: 178 LKVSIKRLKDMEAAVEAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDV 237
Query: 334 GYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
GYHK AV+EA KL +P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 238 GYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAQGIADAILEGR 296
>gi|187928367|ref|YP_001898854.1| 30S ribosomal protein S2 [Ralstonia pickettii 12J]
gi|238691812|sp|B2UB06.1|RS2_RALPJ RecName: Full=30S ribosomal protein S2
gi|187725257|gb|ACD26422.1| ribosomal protein S2 [Ralstonia pickettii 12J]
Length = 247
Score = 323 bits (829), Expect = 2e-85, Method: Composition-based stats.
Identities = 145/218 (66%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY+ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMPF+D RWLGG+LTNFKT+KTSI+RLK+M++ G+
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKEAGATE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|83748807|ref|ZP_00945820.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551]
gi|207743244|ref|YP_002259636.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609]
gi|300704231|ref|YP_003745834.1| 30S ribosomal protein S2 [Ralstonia solanacearum CFBP2957]
gi|421888317|ref|ZP_16319417.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum K60-1]
gi|421897347|ref|ZP_16327715.1| 30s ribosomal protein s2 [Ralstonia solanacearum MolK2]
gi|83724499|gb|EAP71664.1| SSU ribosomal protein S2P [Ralstonia solanacearum UW551]
gi|206588553|emb|CAQ35516.1| 30s ribosomal protein s2 [Ralstonia solanacearum MolK2]
gi|206594641|emb|CAQ61568.1| 30s ribosomal protein s2 [Ralstonia solanacearum IPO1609]
gi|299071895|emb|CBJ43224.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CFBP2957]
gi|378966356|emb|CCF96165.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum K60-1]
Length = 247
Score = 322 bits (825), Expect = 8e-85, Method: Composition-based stats.
Identities = 144/218 (66%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKTSIKRLKDMETAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|254247883|ref|ZP_04941204.1| ribosomal protein S2 [Burkholderia cenocepacia PC184]
gi|124872659|gb|EAY64375.1| ribosomal protein S2 [Burkholderia cenocepacia PC184]
Length = 286
Score = 321 bits (823), Expect = 1e-84, Method: Composition-based stats.
Identities = 143/239 (59%), Positives = 193/239 (80%), Gaps = 1/239 (0%)
Query: 155 KYAERIFSRPSY-MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKT 213
+Y R+ ++PS+ + ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT
Sbjct: 26 RYGSRLKTQPSWRIYMAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKT 85
Query: 214 LYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKT 273
L M+ A +Y+ QL ++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT
Sbjct: 86 LPMFTDAQKYVRQLAANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKT 145
Query: 274 IKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDV 333
+K SI+RLK+M+ + +G K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DV
Sbjct: 146 LKVSIKRLKDMEAAVESGETEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDV 205
Query: 334 GYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
GYHK AV+EA KL +P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 206 GYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 264
>gi|393776916|ref|ZP_10365210.1| 30S ribosomal protein S2 [Ralstonia sp. PBA]
gi|392716273|gb|EIZ03853.1| 30S ribosomal protein S2 [Ralstonia sp. PBA]
Length = 248
Score = 321 bits (822), Expect = 1e-84, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 189/218 (86%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLSANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ + +G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAMLESGAVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEAL+F R+ +KL + IGGIK++ +PDAIF++DVGYHK A++EA KL IP+IGVV
Sbjct: 127 QMSKKEALMFEREMVKLQKSIGGIKDLGGVPDAIFVVDVGYHKIAITEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+PDGI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHTPDGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|339484804|ref|YP_004696590.1| 30S ribosomal protein S2 [Nitrosomonas sp. Is79A3]
gi|338806949|gb|AEJ03191.1| ribosomal protein S2 [Nitrosomonas sp. Is79A3]
Length = 239
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YI+GHRNKIHIINLEKTL MYE+A++Y+ QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTLVMYEEAMKYVRQLSANKGVI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA R G P++DQRWLGG+LTNFKTIK SI+RL++M+ + +G++
Sbjct: 67 LFVGTKRQARDIVREEATRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMETMVQDGTLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKEAL +R+ KLN +GGIK+M +PDA+F+IDVGY KGA++EA KL IP+IGV+
Sbjct: 127 KLVKKEALDLHRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEAKKLGIPVIGVI 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+PDG+ Y+IPGNDDS+++I LY +G+ DA L+ +
Sbjct: 187 DTNHNPDGLQYLIPGNDDSSRAIRLYARGVADAVLEGR 224
>gi|113868034|ref|YP_726523.1| 30S ribosomal protein S2 [Ralstonia eutropha H16]
gi|123133954|sp|Q0KA16.1|RS2_RALEH RecName: Full=30S ribosomal protein S2
gi|113526810|emb|CAJ93155.1| SSU ribosomal protein S2 [Ralstonia eutropha H16]
Length = 248
Score = 320 bits (820), Expect = 3e-84, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +P+IGVV
Sbjct: 127 TMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|312796244|ref|YP_004029166.1| 30S ribosomal protein S2 [Burkholderia rhizoxinica HKI 454]
gi|312168019|emb|CBW75022.1| SSU ribosomal protein S2P [Burkholderia rhizoxinica HKI 454]
Length = 274
Score = 320 bits (820), Expect = 3e-84, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 33 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 92
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+KTSI++LK+M+ I +G +
Sbjct: 93 LFVGTKRQSRDTIAEEAARAGMPYVNNRWLGGMLTNFKTLKTSIKKLKDMEAAIESGEVE 152
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEAL+F R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VV
Sbjct: 153 KMSKKEALMFEREMAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEAKKLGVPVIAVV 212
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++YVIPGNDD++K++ LY +G+ DA L+ +
Sbjct: 213 DTNHSPDGVDYVIPGNDDASKAVVLYAQGVADAILEGR 250
>gi|344171468|emb|CCA84080.1| 30S ribosomal subunit protein S2 [Ralstonia syzygii R24]
Length = 247
Score = 319 bits (817), Expect = 5e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMVKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|386333615|ref|YP_006029785.1| 30S ribosomal protein S2 [Ralstonia solanacearum Po82]
gi|334196064|gb|AEG69249.1| 30S ribosomal protein S2 [Ralstonia solanacearum Po82]
Length = 247
Score = 319 bits (817), Expect = 5e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMETAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|17546123|ref|NP_519525.1| 30S ribosomal protein S2 [Ralstonia solanacearum GMI1000]
gi|25009208|sp|Q8XZJ1.1|RS2_RALSO RecName: Full=30S ribosomal protein S2
gi|17428419|emb|CAD15106.1| probable 30s ribosomal protein s2 [Ralstonia solanacearum GMI1000]
Length = 247
Score = 318 bits (816), Expect = 7e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 SMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|300691604|ref|YP_003752599.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07]
gi|299078664|emb|CBJ51322.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum PSI07]
gi|344169914|emb|CCA82283.1| 30S ribosomal subunit protein S2 [blood disease bacterium R229]
Length = 247
Score = 318 bits (816), Expect = 7e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMAKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|299067459|emb|CBJ38658.1| 30S ribosomal subunit protein S2 [Ralstonia solanacearum CMR15]
Length = 247
Score = 318 bits (816), Expect = 7e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMETAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 SMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|83654618|gb|ABC38681.1| ribosomal protein S2 [Burkholderia thailandensis E264]
Length = 304
Score = 318 bits (815), Expect = 1e-83, Method: Composition-based stats.
Identities = 141/231 (61%), Positives = 189/231 (81%), Gaps = 1/231 (0%)
Query: 163 RPSY-MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAI 221
+PS+ ++ ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A
Sbjct: 52 KPSWRIQMAVTMRQMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQ 111
Query: 222 RYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRL 281
+Y+ QL ++GT+LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RL
Sbjct: 112 KYVRQLAANRGTILFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRL 171
Query: 282 KEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVS 341
K+M+ + G + K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+
Sbjct: 172 KDMEAAVEAGELEKMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVT 231
Query: 342 EAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
EA KL +P+I VVDTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 232 EANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 282
>gi|319943826|ref|ZP_08018107.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599]
gi|319743059|gb|EFV95465.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599]
Length = 250
Score = 318 bits (815), Expect = 1e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFGHRNKIHIINLEKTL Y++A RY+ QL + GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGHRNKIHIINLEKTLVKYQEATRYLRQLAANGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP++D+RWLGG+LTNFKT+K SI+RLK+M+ + +G++
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYVDERWLGGMLTNFKTVKGSIKRLKDMEQAVEDGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKEALLF R+ KL +GGIK++N +PDA+FI+DVGYHK AV+EA KL +PI+GVV
Sbjct: 127 QMTKKEALLFTRELAKLTSSLGGIKDLNGLPDALFIVDVGYHKIAVTEARKLGVPIVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS +++ LY +G+ DA L+ K
Sbjct: 187 DTNHSPEGIDYVIPGNDDSGRAVRLYARGVADAILEGK 224
>gi|187478228|ref|YP_786252.1| 30S ribosomal protein S2 [Bordetella avium 197N]
gi|123766158|sp|Q2L162.1|RS2_BORA1 RecName: Full=30S ribosomal protein S2
gi|115422814|emb|CAJ49342.1| 30S ribosomal protein S2 [Bordetella avium 197N]
Length = 249
Score = 318 bits (815), Expect = 1e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+K+SI+RLKEM++ + +GS+
Sbjct: 66 LFVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGSVE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L+KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RLTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++Y+IPGNDDSA++IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEGR 223
>gi|194289792|ref|YP_002005699.1| 30S ribosomal protein S2 [Cupriavidus taiwanensis LMG 19424]
gi|229470512|sp|B3R2B7.1|RS2_CUPTR RecName: Full=30S ribosomal protein S2
gi|193223627|emb|CAQ69634.1| 30S ribosomal subunit protein S2 [Cupriavidus taiwanensis LMG
19424]
Length = 247
Score = 318 bits (815), Expect = 1e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK M +PDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|73541570|ref|YP_296090.1| 30S ribosomal protein S2 [Ralstonia eutropha JMP134]
gi|123774077|sp|Q470D7.1|RS2_RALEJ RecName: Full=30S ribosomal protein S2
gi|72118983|gb|AAZ61246.1| SSU ribosomal protein S2P [Ralstonia eutropha JMP134]
Length = 247
Score = 318 bits (814), Expect = 1e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 MFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|348618592|ref|ZP_08885113.1| 30S ribosomal subunit protein S2 [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816145|emb|CCD29905.1| 30S ribosomal subunit protein S2 [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 256
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 181/219 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKTL MY +A++Y ++ +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPMYREALQYARRISAGRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVG KR AR IA EA RAGMP+I+ RWLGG+LTNFKT+K SI++LKEM+ +G++
Sbjct: 67 LFVGAKRGAREAIALEAARAGMPYINIRWLGGMLTNFKTLKASIKKLKEMESIAASGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGG+KNMN IPDA+FIIDVGYH+ A++EA KL+IP+I VV
Sbjct: 127 NMSKKEALMFERRLAKLEKSIGGVKNMNGIPDALFIIDVGYHRIALAEAGKLDIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSPDG++YVIPGNDDS+K+ ALY +G+ DA L +
Sbjct: 187 DTNHSPDGVDYVIPGNDDSSKAAALYIRGMADAILAGRA 225
>gi|413962886|ref|ZP_11402113.1| 30S ribosomal protein S2 [Burkholderia sp. SJ98]
gi|413928718|gb|EKS68006.1| 30S ribosomal protein S2 [Burkholderia sp. SJ98]
Length = 250
Score = 317 bits (812), Expect = 2e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKTL +Y A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPLYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAARAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAALESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ +KL + IGG+K+M IPDA+F+IDVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMVKLQKSIGGVKDMGGIPDAMFVIDVGYHKIAVTEAKKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYAQGVADAILEGR 224
>gi|189350815|ref|YP_001946443.1| 30S ribosomal protein S2 [Burkholderia multivorans ATCC 17616]
gi|221198322|ref|ZP_03571368.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M]
gi|221208261|ref|ZP_03581265.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2]
gi|221215457|ref|ZP_03588421.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1]
gi|421472286|ref|ZP_15920498.1| ribosomal protein S2 [Burkholderia multivorans ATCC BAA-247]
gi|421475338|ref|ZP_15923299.1| ribosomal protein S2 [Burkholderia multivorans CF2]
gi|189334837|dbj|BAG43907.1| small subunit ribosomal protein S2 [Burkholderia multivorans ATCC
17616]
gi|221164641|gb|EED97123.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD1]
gi|221171909|gb|EEE04352.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2]
gi|221182254|gb|EEE14655.1| 30S ribosomal protein S2 [Burkholderia multivorans CGD2M]
gi|400223420|gb|EJO53721.1| ribosomal protein S2 [Burkholderia multivorans ATCC BAA-247]
gi|400230366|gb|EJO60153.1| ribosomal protein S2 [Burkholderia multivorans CF2]
Length = 246
Score = 317 bits (812), Expect = 2e-83, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>gi|339326121|ref|YP_004685814.1| 30S ribosomal protein S2 [Cupriavidus necator N-1]
gi|338166278|gb|AEI77333.1| 30S ribosomal protein S2 [Cupriavidus necator N-1]
Length = 248
Score = 317 bits (812), Expect = 2e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +P+IGVV
Sbjct: 127 TMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|325983646|ref|YP_004296048.1| 30S ribosomal protein S2 [Nitrosomonas sp. AL212]
gi|325533165|gb|ADZ27886.1| ribosomal protein S2 [Nitrosomonas sp. AL212]
Length = 239
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKTL MYE+A++YI QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLVMYEEAMKYIRQLSANKGVI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G P++DQRWLGG+LTNFKTIK SI+RL++M+ + +G++
Sbjct: 67 LFVGTKRQARDIVREEAMRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMENMVQDGTLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKEAL R+ KLN +GGIK+M +PDA+F+IDVGY KGA++EA KL IP+IGVV
Sbjct: 127 KLVKKEALDLQRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEARKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+PD ++Y+IPGNDDS+++I LY +G DA L+ +
Sbjct: 187 DTNHNPDNLHYIIPGNDDSSRAIRLYARGAADAILEGR 224
>gi|427402231|ref|ZP_18893303.1| 30S ribosomal protein S2 [Massilia timonae CCUG 45783]
gi|425719004|gb|EKU81945.1| 30S ribosomal protein S2 [Massilia timonae CCUG 45783]
Length = 249
Score = 317 bits (811), Expect = 3e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT+ MY+ A++ I Q+ ++GT+
Sbjct: 7 EMLEAGIHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTMAMYQDAMKTIKQISANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +IA EA RAG+P++DQRWLGG+LTNFKTIKTSI+RLK+M+ + +GS+
Sbjct: 67 LMVGTKRQARDIIAAEAQRAGVPYVDQRWLGGMLTNFKTIKTSIKRLKDMEAQVEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGGIK++ +PDAIF++DVGYHKG ++EA KL IP+IG+V
Sbjct: 127 KMSKKEALLFSREMEKLQKSIGGIKDLGGVPDAIFVVDVGYHKGTITEAGKLGIPVIGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ +VIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVTHVIPGNDDSSKAITLYARGVADAILEGR 224
>gi|421748132|ref|ZP_16185769.1| 30S ribosomal protein S2 [Cupriavidus necator HPC(L)]
gi|409773180|gb|EKN55026.1| 30S ribosomal protein S2 [Cupriavidus necator HPC(L)]
Length = 247
Score = 317 bits (811), Expect = 3e-83, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPDGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|390571412|ref|ZP_10251655.1| 30S ribosomal protein S2 [Burkholderia terrae BS001]
gi|420254936|ref|ZP_14757902.1| ribosomal protein S2 [Burkholderia sp. BT03]
gi|389936649|gb|EIM98534.1| 30S ribosomal protein S2 [Burkholderia terrae BS001]
gi|398047273|gb|EJL39824.1| ribosomal protein S2 [Burkholderia sp. BT03]
Length = 250
Score = 316 bits (810), Expect = 4e-83, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALYT+G+ +A ++ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYTQGVAEAIVEGR 224
>gi|377820503|ref|YP_004976874.1| 30S ribosomal protein S2 [Burkholderia sp. YI23]
gi|357935338|gb|AET88897.1| ribosomal protein S2 [Burkholderia sp. YI23]
Length = 250
Score = 316 bits (809), Expect = 5e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKTL +Y A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPLYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAARAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAALESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ +KL + IGG+K+M IPDA+F+IDVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMVKLQKSIGGVKDMGGIPDAMFVIDVGYHKIAVTEAKKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYAEGVADAILEGR 224
>gi|389872082|ref|YP_006379501.1| 30S ribosomal protein S2 [Advenella kashmirensis WT001]
gi|388537331|gb|AFK62519.1| 30S ribosomal protein S2 [Advenella kashmirensis WT001]
Length = 249
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 177/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS YIFGHRNKIHIINLEKT+ + +A ++ Q+ G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMSQYIFGHRNKIHIINLEKTVANFLEAQKFARQIASRGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKR AR +IA EA R GMPF+D RWLGG++TNFKT+KTSI+RLK+M+ + +GS
Sbjct: 66 LLVGTKRAAREIIAEEAARCGMPFVDSRWLGGMMTNFKTVKTSIKRLKDMEAAVADGSKE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKE L+F R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A+ EA L IP+I VV
Sbjct: 126 RMSKKEGLMFDREMDKLNKSIGGIKDMNTLPDALFVIDVGYHKIAIQEARTLGIPVIAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG+ YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGVEYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|94310377|ref|YP_583587.1| 30S ribosomal protein S2 [Cupriavidus metallidurans CH34]
gi|430810559|ref|ZP_19437671.1| 30S ribosomal protein S2 [Cupriavidus sp. HMR-1]
gi|123383874|sp|Q1LNF8.1|RS2_RALME RecName: Full=30S ribosomal protein S2
gi|93354229|gb|ABF08318.1| 30S ribosomal subunit protein S2 [Cupriavidus metallidurans CH34]
gi|429496967|gb|EKZ95524.1| 30S ribosomal protein S2 [Cupriavidus sp. HMR-1]
Length = 247
Score = 315 bits (808), Expect = 6e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|53719768|ref|YP_108754.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243]
gi|53723739|ref|YP_103195.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 23344]
gi|67641710|ref|ZP_00440479.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4]
gi|76808700|ref|YP_333975.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710b]
gi|121598729|ref|YP_993372.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1]
gi|124386642|ref|YP_001029191.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229]
gi|126439256|ref|YP_001059469.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668]
gi|126448724|ref|YP_001080879.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247]
gi|126454332|ref|YP_001066752.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a]
gi|134277198|ref|ZP_01763913.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305]
gi|167000550|ref|ZP_02266361.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20]
gi|167720166|ref|ZP_02403402.1| 30S ribosomal protein S2 [Burkholderia pseudomallei DM98]
gi|167739171|ref|ZP_02411945.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 14]
gi|167816382|ref|ZP_02448062.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 91]
gi|167824760|ref|ZP_02456231.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 9]
gi|167846292|ref|ZP_02471800.1| 30S ribosomal protein S2 [Burkholderia pseudomallei B7210]
gi|167894874|ref|ZP_02482276.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 7894]
gi|167903263|ref|ZP_02490468.1| 30S ribosomal protein S2 [Burkholderia pseudomallei NCTC 13177]
gi|167911504|ref|ZP_02498595.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 112]
gi|167919513|ref|ZP_02506604.1| 30S ribosomal protein S2 [Burkholderia pseudomallei BCC215]
gi|217421460|ref|ZP_03452964.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576]
gi|226200131|ref|ZP_03795677.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9]
gi|237812808|ref|YP_002897259.1| 30S ribosomal protein S2 [Burkholderia pseudomallei MSHR346]
gi|242316914|ref|ZP_04815930.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b]
gi|254178385|ref|ZP_04885040.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399]
gi|254179321|ref|ZP_04885920.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655]
gi|254189293|ref|ZP_04895804.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237]
gi|254197600|ref|ZP_04904022.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13]
gi|254200147|ref|ZP_04906513.1| 30S ribosomal protein S2 [Burkholderia mallei FMH]
gi|254206485|ref|ZP_04912837.1| 30S ribosomal protein S2 [Burkholderia mallei JHU]
gi|254261636|ref|ZP_04952690.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a]
gi|254297205|ref|ZP_04964658.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e]
gi|254358106|ref|ZP_04974379.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280]
gi|403519180|ref|YP_006653314.1| 30S ribosomal protein S2 [Burkholderia pseudomallei BPC006]
gi|61215451|sp|Q62JC4.1|RS2_BURMA RecName: Full=30S ribosomal protein S2
gi|61215464|sp|Q63T12.1|RS2_BURPS RecName: Full=30S ribosomal protein S2
gi|123598728|sp|Q3JR28.1|RS2_BURP1 RecName: Full=30S ribosomal protein S2
gi|166225246|sp|A3MKU3.1|RS2_BURM7 RecName: Full=30S ribosomal protein S2
gi|166225247|sp|A2SB72.1|RS2_BURM9 RecName: Full=30S ribosomal protein S2
gi|166225248|sp|A1V569.1|RS2_BURMS RecName: Full=30S ribosomal protein S2
gi|166225249|sp|A3NWN1.1|RS2_BURP0 RecName: Full=30S ribosomal protein S2
gi|166225250|sp|A3NAU8.1|RS2_BURP6 RecName: Full=30S ribosomal protein S2
gi|52210182|emb|CAH36161.1| 30S ribosomal protein S2 [Burkholderia pseudomallei K96243]
gi|52427162|gb|AAU47755.1| ribosomal protein S2 [Burkholderia mallei ATCC 23344]
gi|76578153|gb|ABA47628.1| ribosomal protein S2 [Burkholderia pseudomallei 1710b]
gi|121227539|gb|ABM50057.1| 30S ribosomal protein S2 [Burkholderia mallei SAVP1]
gi|124294662|gb|ABN03931.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10229]
gi|126218749|gb|ABN82255.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 668]
gi|126227974|gb|ABN91514.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106a]
gi|126241594|gb|ABO04687.1| 30S ribosomal protein S2 [Burkholderia mallei NCTC 10247]
gi|134250848|gb|EBA50927.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 305]
gi|147749743|gb|EDK56817.1| 30S ribosomal protein S2 [Burkholderia mallei FMH]
gi|147753928|gb|EDK60993.1| 30S ribosomal protein S2 [Burkholderia mallei JHU]
gi|148027233|gb|EDK85254.1| 30S ribosomal protein S2 [Burkholderia mallei 2002721280]
gi|157807778|gb|EDO84948.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 406e]
gi|157936972|gb|EDO92642.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pasteur 52237]
gi|160699424|gb|EDP89394.1| 30S ribosomal protein S2 [Burkholderia mallei ATCC 10399]
gi|169654341|gb|EDS87034.1| 30S ribosomal protein S2 [Burkholderia pseudomallei S13]
gi|184209861|gb|EDU06904.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1655]
gi|217395202|gb|EEC35220.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 576]
gi|225927815|gb|EEH23856.1| 30S ribosomal protein S2 [Burkholderia pseudomallei Pakistan 9]
gi|237502852|gb|ACQ95170.1| ribosomal protein S2 [Burkholderia pseudomallei MSHR346]
gi|238522672|gb|EEP86115.1| 30S ribosomal protein S2 [Burkholderia mallei GB8 horse 4]
gi|242140153|gb|EES26555.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1106b]
gi|243063480|gb|EES45666.1| 30S ribosomal protein S2 [Burkholderia mallei PRL-20]
gi|254220325|gb|EET09709.1| 30S ribosomal protein S2 [Burkholderia pseudomallei 1710a]
gi|403074823|gb|AFR16403.1| 30S ribosomal protein S2 [Burkholderia pseudomallei BPC006]
Length = 246
Score = 315 bits (808), Expect = 6e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>gi|186476096|ref|YP_001857566.1| 30S ribosomal protein S2 [Burkholderia phymatum STM815]
gi|238691307|sp|B2JIC6.1|RS2_BURP8 RecName: Full=30S ribosomal protein S2
gi|184192555|gb|ACC70520.1| ribosomal protein S2 [Burkholderia phymatum STM815]
Length = 250
Score = 315 bits (807), Expect = 7e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA A RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDD++K++ALYT+G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGR 224
>gi|416948012|ref|ZP_11935151.1| 30S ribosomal protein S2 [Burkholderia sp. TJI49]
gi|325523570|gb|EGD01869.1| 30S ribosomal protein S2 [Burkholderia sp. TJI49]
Length = 246
Score = 315 bits (807), Expect = 8e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK A++EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEATKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|374370893|ref|ZP_09628883.1| 30S ribosomal protein S2 [Cupriavidus basilensis OR16]
gi|373097556|gb|EHP38687.1| 30S ribosomal protein S2 [Cupriavidus basilensis OR16]
Length = 247
Score = 315 bits (807), Expect = 8e-83, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLSANRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG++TNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMMTNFKTVKISIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +P+IGVV
Sbjct: 127 TMSKKEALMFEREMDKLQKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEAKKLGVPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|295676825|ref|YP_003605349.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1002]
gi|295436668|gb|ADG15838.1| ribosomal protein S2 [Burkholderia sp. CCGE1002]
Length = 250
Score = 315 bits (806), Expect = 9e-83, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGR 224
>gi|372489320|ref|YP_005028885.1| 30S ribosomal protein S2 [Dechlorosoma suillum PS]
gi|359355873|gb|AEV27044.1| ribosomal protein S2 [Dechlorosoma suillum PS]
Length = 249
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 136/220 (61%), Positives = 184/220 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL Y +A+ ++ +L +KGT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLAANKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKRQAR +IA EA RAG P++DQRWLGG+LTNFKT+K SI+RL++M+ + +GSI
Sbjct: 67 MFVGTKRQAREIIAEEAQRAGTPYVDQRWLGGMLTNFKTVKQSIKRLQDMEQSVEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L KKEAL+ R+ KL + IGGIKNM +PDA+F++DVGYHK A++EA KL IP+I VV
Sbjct: 127 RLGKKEALMQKRELEKLQKSIGGIKNMAGLPDALFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
DTNHSP+G++YVIPGNDDS+++I LY +G+ DA L+ +++
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSRAIRLYARGVADAILEGRSM 226
>gi|209518708|ref|ZP_03267524.1| ribosomal protein S2 [Burkholderia sp. H160]
gi|209500822|gb|EEA00862.1| ribosomal protein S2 [Burkholderia sp. H160]
Length = 250
Score = 314 bits (805), Expect = 1e-82, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLASNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDASKAVALYAAGVADAILEGR 224
>gi|307729331|ref|YP_003906555.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1003]
gi|307583866|gb|ADN57264.1| ribosomal protein S2 [Burkholderia sp. CCGE1003]
Length = 250
Score = 314 bits (804), Expect = 2e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ +KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 RMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGR 224
>gi|91784119|ref|YP_559325.1| 30S ribosomal protein S2 [Burkholderia xenovorans LB400]
gi|385209105|ref|ZP_10035973.1| ribosomal protein S2 [Burkholderia sp. Ch1-1]
gi|123062774|sp|Q13XB6.1|RS2_BURXL RecName: Full=30S ribosomal protein S2
gi|91688073|gb|ABE31273.1| SSU ribosomal protein S2P [Burkholderia xenovorans LB400]
gi|385181443|gb|EIF30719.1| ribosomal protein S2 [Burkholderia sp. Ch1-1]
Length = 250
Score = 314 bits (804), Expect = 2e-82, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>gi|162139865|ref|YP_411356.2| 30S ribosomal protein S2 [Nitrosospira multiformis ATCC 25196]
gi|209573698|sp|Q2YBA7.2|RS2_NITMU RecName: Full=30S ribosomal protein S2
Length = 248
Score = 314 bits (804), Expect = 2e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFGHRNKIHIINLEKTL MY++A+ Y+ QL +KGT+
Sbjct: 7 QMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G PF+DQRWLGG+LTNFKTIK S++RL +M+ + +G++
Sbjct: 67 LFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDGTLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R+ KLNR +GGIK+M +PDA+F+IDVGY KGA++EA KL IPI+G+V
Sbjct: 127 KLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIVGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 187 DSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>gi|187924433|ref|YP_001896075.1| 30S ribosomal protein S2 [Burkholderia phytofirmans PsJN]
gi|238689611|sp|B2T5J4.1|RS2_BURPP RecName: Full=30S ribosomal protein S2
gi|187715627|gb|ACD16851.1| ribosomal protein S2 [Burkholderia phytofirmans PsJN]
Length = 250
Score = 314 bits (804), Expect = 2e-82, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>gi|323526488|ref|YP_004228641.1| 30S ribosomal protein S2 [Burkholderia sp. CCGE1001]
gi|323383490|gb|ADX55581.1| ribosomal protein S2 [Burkholderia sp. CCGE1001]
Length = 250
Score = 314 bits (804), Expect = 2e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ +KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 RMSKKEALLFEREMLKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGR 224
>gi|167837041|ref|ZP_02463924.1| 30S ribosomal protein S2 [Burkholderia thailandensis MSMB43]
Length = 247
Score = 313 bits (803), Expect = 3e-82, Method: Composition-based stats.
Identities = 140/219 (63%), Positives = 184/219 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +T
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRT 225
>gi|82409855|gb|ABB73964.1| SSU ribosomal protein S2P [Nitrosospira multiformis ATCC 25196]
Length = 260
Score = 313 bits (803), Expect = 3e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFGHRNKIHIINLEKTL MY++A+ Y+ QL +KGT+
Sbjct: 19 QMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANKGTI 78
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G PF+DQRWLGG+LTNFKTIK S++RL +M+ + +G++
Sbjct: 79 LFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDGTLD 138
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R+ KLNR +GGIK+M +PDA+F+IDVGY KGA++EA KL IPI+G+V
Sbjct: 139 KLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIVGIV 198
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 199 DSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 236
>gi|115352103|ref|YP_773942.1| 30S ribosomal protein S2 [Burkholderia ambifaria AMMD]
gi|170699873|ref|ZP_02890903.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10]
gi|172060967|ref|YP_001808619.1| 30S ribosomal protein S2 [Burkholderia ambifaria MC40-6]
gi|402566198|ref|YP_006615543.1| 30S ribosomal protein S2 [Burkholderia cepacia GG4]
gi|122322840|sp|Q0BE15.1|RS2_BURCM RecName: Full=30S ribosomal protein S2
gi|238689164|sp|B1YS74.1|RS2_BURA4 RecName: Full=30S ribosomal protein S2
gi|115282091|gb|ABI87608.1| SSU ribosomal protein S2P [Burkholderia ambifaria AMMD]
gi|170135195|gb|EDT03493.1| ribosomal protein S2 [Burkholderia ambifaria IOP40-10]
gi|171993484|gb|ACB64403.1| ribosomal protein S2 [Burkholderia ambifaria MC40-6]
gi|402247395|gb|AFQ47849.1| 30S ribosomal protein S2 [Burkholderia cepacia GG4]
Length = 246
Score = 313 bits (802), Expect = 3e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|170692142|ref|ZP_02883305.1| ribosomal protein S2 [Burkholderia graminis C4D1M]
gi|170142572|gb|EDT10737.1| ribosomal protein S2 [Burkholderia graminis C4D1M]
Length = 250
Score = 313 bits (802), Expect = 3e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 RMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGR 224
>gi|424903697|ref|ZP_18327210.1| 30S ribosomal protein S2 [Burkholderia thailandensis MSMB43]
gi|390931570|gb|EIP88971.1| 30S ribosomal protein S2 [Burkholderia thailandensis MSMB43]
Length = 240
Score = 313 bits (801), Expect = 4e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 1 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G + K
Sbjct: 61 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELEK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 121 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +T
Sbjct: 181 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGRT 218
>gi|407713934|ref|YP_006834499.1| 30S ribosomal protein S2 [Burkholderia phenoliruptrix BR3459a]
gi|407236118|gb|AFT86317.1| small subunit ribosomal protein S2 [Burkholderia phenoliruptrix
BR3459a]
Length = 246
Score = 313 bits (801), Expect = 4e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 3 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 63 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ +KL + IGG+K M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 123 RMSKKEALLFEREMLKLQKSIGGVKEMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALY G+ DA L+ +
Sbjct: 183 DTNHSPEGIDYVIPGNDDASKAVALYAAGVADAILEGR 220
>gi|167563188|ref|ZP_02356104.1| 30S ribosomal protein S2 [Burkholderia oklahomensis EO147]
gi|167570371|ref|ZP_02363245.1| 30S ribosomal protein S2 [Burkholderia oklahomensis C6786]
Length = 246
Score = 313 bits (801), Expect = 5e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|330817439|ref|YP_004361144.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3]
gi|327369832|gb|AEA61188.1| 30S ribosomal protein S2 [Burkholderia gladioli BSR3]
Length = 246
Score = 312 bits (800), Expect = 5e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLSANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK A++EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|311105983|ref|YP_003978836.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans A8]
gi|310760672|gb|ADP16121.1| ribosomal protein S2 [Achromobacter xylosoxidans A8]
Length = 249
Score = 312 bits (800), Expect = 5e-82, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 180/218 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+KTS++RLK+M++ + G
Sbjct: 66 LFVGTKRAARELVATEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDAIF+IDVGYHK A++EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAIFVIDVGYHKIAIAEAKTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|326316573|ref|YP_004234245.1| 30S ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323373409|gb|ADX45678.1| ribosomal protein S2 [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 250
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 184/219 (84%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A+EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILASEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L F R+ KL + IGGI++MN +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>gi|395005220|ref|ZP_10389112.1| ribosomal protein S2 [Acidovorax sp. CF316]
gi|394316800|gb|EJE53501.1| ribosomal protein S2 [Acidovorax sp. CF316]
Length = 250
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 182/219 (83%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +++ EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 67 LMVGTKRQAREILSTEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQLETG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SLSKKEQLTFTREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGRA 224
>gi|171318106|ref|ZP_02907275.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5]
gi|171096730|gb|EDT41615.1| ribosomal protein S2 [Burkholderia ambifaria MEX-5]
Length = 246
Score = 312 bits (799), Expect = 8e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|121608410|ref|YP_996217.1| 30S ribosomal protein S2 [Verminephrobacter eiseniae EF01-2]
gi|166226767|sp|A1WHU2.1|RS2_VEREI RecName: Full=30S ribosomal protein S2
gi|121553050|gb|ABM57199.1| SSU ribosomal protein S2P [Verminephrobacter eiseniae EF01-2]
Length = 250
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 184/219 (84%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A +++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA+RAGMPF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M+ +P+AIF+IDVG+HK AV+EA KL I +IGVV
Sbjct: 126 SLSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGIALIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>gi|293605056|ref|ZP_06687449.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553]
gi|292816558|gb|EFF75646.1| 30S ribosomal protein S2 [Achromobacter piechaudii ATCC 43553]
Length = 249
Score = 311 bits (798), Expect = 9e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A+EA R GMPF+D RWLGG+LTNFKT+KTS++RLK+M++ + G
Sbjct: 66 LFVGTKRAARELVASEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEVVVAEGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A++EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|340785856|ref|YP_004751321.1| stringent starvation protein A [Collimonas fungivorans Ter331]
gi|340551123|gb|AEK60498.1| Stringent starvation protein A [Collimonas fungivorans Ter331]
Length = 203
Score = 311 bits (798), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 142/178 (79%), Positives = 165/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISTMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+FIH++ LENE+ K + K +++AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFIHVHTLENEKTKAAEKSHEKARSEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|206560453|ref|YP_002231217.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315]
gi|421865677|ref|ZP_16297352.1| SSU ribosomal protein S2p (SAe) [Burkholderia cenocepacia H111]
gi|444358426|ref|ZP_21159832.1| ribosomal protein S2 [Burkholderia cenocepacia BC7]
gi|238693110|sp|B4ECN1.1|RS2_BURCJ RecName: Full=30S ribosomal protein S2
gi|198036494|emb|CAR52391.1| 30S ribosomal protein S2 [Burkholderia cenocepacia J2315]
gi|358074258|emb|CCE48230.1| SSU ribosomal protein S2p (SAe) [Burkholderia cenocepacia H111]
gi|443604109|gb|ELT72070.1| ribosomal protein S2 [Burkholderia cenocepacia BC7]
Length = 246
Score = 311 bits (798), Expect = 9e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|78066798|ref|YP_369567.1| 30S ribosomal protein S2 [Burkholderia sp. 383]
gi|107028801|ref|YP_625896.1| 30S ribosomal protein S2 [Burkholderia cenocepacia AU 1054]
gi|116690040|ref|YP_835663.1| 30S ribosomal protein S2 [Burkholderia cenocepacia HI2424]
gi|170733375|ref|YP_001765322.1| 30S ribosomal protein S2 [Burkholderia cenocepacia MC0-3]
gi|123370089|sp|Q1BHI2.1|RS2_BURCA RecName: Full=30S ribosomal protein S2
gi|123728962|sp|Q39F43.1|RS2_BURS3 RecName: Full=30S ribosomal protein S2
gi|166225245|sp|A0K8E3.1|RS2_BURCH RecName: Full=30S ribosomal protein S2
gi|238688584|sp|B1JUF0.1|RS2_BURCC RecName: Full=30S ribosomal protein S2
gi|77967543|gb|ABB08923.1| SSU ribosomal protein S2P [Burkholderia sp. 383]
gi|105897965|gb|ABF80923.1| SSU ribosomal protein S2P [Burkholderia cenocepacia AU 1054]
gi|116648129|gb|ABK08770.1| SSU ribosomal protein S2P [Burkholderia cenocepacia HI2424]
gi|169816617|gb|ACA91200.1| ribosomal protein S2 [Burkholderia cenocepacia MC0-3]
Length = 246
Score = 311 bits (798), Expect = 9e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|149928184|ref|ZP_01916429.1| 30S ribosomal protein S2 [Limnobacter sp. MED105]
gi|149823075|gb|EDM82315.1| 30S ribosomal protein S2 [Limnobacter sp. MED105]
Length = 251
Score = 311 bits (798), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 180/218 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ YI+GHRNKIHIINLEKT+ M + A++++ +L ++G +
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTVVMLDDALKFVKRLSANRGNI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQA+ +IA EA R GMP++DQRWLGG+LTNFKT+KTSI+RLK+M+ I +G
Sbjct: 67 LFVCTKRQAKEIIAEEAQRCGMPYVDQRWLGGMLTNFKTVKTSIKRLKDMEAIIADGGTE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEAL+F R+ KLN+ IGGIK+M +PDAIF+ DVGYHK A++EA KL IP++G+V
Sbjct: 127 RMSKKEALMFARELEKLNQSIGGIKDMPTLPDAIFVCDVGYHKIAITEAEKLGIPVVGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP G++Y+IPGNDDSA++I LY + + DA L +
Sbjct: 187 DTNHSPAGVSYIIPGNDDSARAIRLYARSVADAVLAGR 224
>gi|167586855|ref|ZP_02379243.1| 30S ribosomal protein S2 [Burkholderia ubonensis Bu]
Length = 247
Score = 311 bits (798), Expect = 9e-82, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|444369963|ref|ZP_21169663.1| ribosomal protein S2 [Burkholderia cenocepacia K56-2Valvano]
gi|443598271|gb|ELT66644.1| ribosomal protein S2 [Burkholderia cenocepacia K56-2Valvano]
Length = 245
Score = 311 bits (798), Expect = 1e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|161723148|ref|YP_442551.2| 30S ribosomal protein S2 [Burkholderia thailandensis E264]
gi|167581478|ref|ZP_02374352.1| 30S ribosomal protein S2 [Burkholderia thailandensis TXDOH]
gi|167619588|ref|ZP_02388219.1| 30S ribosomal protein S2 [Burkholderia thailandensis Bt4]
gi|257138760|ref|ZP_05587022.1| 30S ribosomal protein S2 [Burkholderia thailandensis E264]
gi|209573712|sp|Q2SWZ8.2|RS2_BURTA RecName: Full=30S ribosomal protein S2
Length = 246
Score = 311 bits (797), Expect = 1e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|134296028|ref|YP_001119763.1| 30S ribosomal protein S2 [Burkholderia vietnamiensis G4]
gi|166225251|sp|A4JF75.1|RS2_BURVG RecName: Full=30S ribosomal protein S2
gi|134139185|gb|ABO54928.1| SSU ribosomal protein S2P [Burkholderia vietnamiensis G4]
Length = 246
Score = 311 bits (797), Expect = 1e-81, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>gi|332284279|ref|YP_004416190.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7]
gi|330428232|gb|AEC19566.1| 30S ribosomal protein S2 [Pusillimonas sp. T7-7]
Length = 249
Score = 311 bits (797), Expect = 1e-81, Method: Composition-based stats.
Identities = 134/218 (61%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFGHRNKIHI+NLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIVNLEQTVVKYQEAAKFVRQLAARGGNV 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG++TNFKT+KTS++RLKEM+ + G+
Sbjct: 66 LFVGTKRAARELVAAEAARCGMPYVDSRWLGGMMTNFKTVKTSVKRLKEMEAQLAEGATE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEAL+F R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMSKKEALMFDRELEKLNKAIGGIKDMNTLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++Y+IPGNDDSAK+IALY +G+ DA L+ +
Sbjct: 186 DTNHSPDGVDYIIPGNDDSAKAIALYARGMADAVLEGR 223
>gi|421482413|ref|ZP_15929995.1| 30S ribosomal protein S2 [Achromobacter piechaudii HLE]
gi|400199748|gb|EJO32702.1| 30S ribosomal protein S2 [Achromobacter piechaudii HLE]
Length = 249
Score = 311 bits (796), Expect = 1e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAQYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A+EA R GMP++D RWLGG+LTNFKT+KTS++RLK+M++ + +G
Sbjct: 66 LFVGTKRAARDLVASEAARCGMPYVDARWLGGMLTNFKTVKTSVKRLKDMEVIVADGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A++EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|445497576|ref|ZP_21464431.1| 30S ribosomal protein S2 [Janthinobacterium sp. HH01]
gi|444787571|gb|ELX09119.1| 30S ribosomal protein S2 [Janthinobacterium sp. HH01]
Length = 250
Score = 311 bits (796), Expect = 1e-81, Method: Composition-based stats.
Identities = 145/218 (66%), Positives = 191/218 (87%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT+ MY++A++++ Q+ ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTMGMYQEAMKHVKQVASNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +IA EA RAG+PF+DQRWLGG+LTNFKTIKTSI+RLK+M+ I +GS+
Sbjct: 67 LMVGTKRQAREIIAAEAARAGVPFVDQRWLGGMLTNFKTIKTSIKRLKDMEASIEDGSVE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFQREMIKLQKSIGGIKDMGGVPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G+ +VIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVQFVIPGNDDSSKAITLYARGVADAILEGR 224
>gi|120610503|ref|YP_970181.1| 30S ribosomal protein S2 [Acidovorax citrulli AAC00-1]
gi|166225230|sp|A1TN69.1|RS2_ACIAC RecName: Full=30S ribosomal protein S2
gi|120588967|gb|ABM32407.1| SSU ribosomal protein S2P [Acidovorax citrulli AAC00-1]
Length = 250
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L F R+ KL + IGGI++MN +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>gi|387902556|ref|YP_006332895.1| 30S ribosomal protein S2 [Burkholderia sp. KJ006]
gi|387577448|gb|AFJ86164.1| SSU ribosomal protein S2p (SAe) [Burkholderia sp. KJ006]
Length = 239
Score = 311 bits (796), Expect = 2e-81, Method: Composition-based stats.
Identities = 140/217 (64%), Positives = 181/217 (83%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 1 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G K
Sbjct: 61 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGETEK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VVD
Sbjct: 121 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVIAVVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 181 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 217
>gi|429462804|ref|YP_007184267.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811451|ref|YP_007447906.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338318|gb|AFZ82741.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776609|gb|AGF47608.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 246
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS YIFG RNKIHIINLEKT+ Y +A+ ++ + S +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMSQYIFGQRNKIHIINLEKTVEKYLEAVEFVKKSSESGSVI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A E++R GMP+++ RWLGG+LTNFKT+K+SI+RLKEM+ + +G I
Sbjct: 66 LFVGTKRAAREFVAEESIRCGMPYVNHRWLGGMLTNFKTVKSSIKRLKEMESMVDSGDIE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKE+LLFYR+ KLNR IGGIKN+ +PD +F++DVGYHK A++EA L I ++GVV
Sbjct: 126 KMTKKESLLFYRELEKLNRAIGGIKNIGGLPDVLFVVDVGYHKIAIAEAKALGIKVVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++YVIPGNDDSAK+I+ Y KGI DA LD +
Sbjct: 186 DTNHSPDGVDYVIPGNDDSAKAISFYVKGIADAVLDGR 223
>gi|163856847|ref|YP_001631145.1| 30S ribosomal protein S2 [Bordetella petrii DSM 12804]
gi|163260575|emb|CAP42877.1| 30S ribosomal protein S2 [Bordetella petrii]
Length = 249
Score = 310 bits (795), Expect = 2e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y+ A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQDATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+KTS++RLK+M+ + G
Sbjct: 66 LFVGTKRAARELVAAEAARCGMPYVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|71907372|ref|YP_284959.1| 30S ribosomal protein S2 [Dechloromonas aromatica RCB]
gi|123760541|sp|Q47F92.1|RS2_DECAR RecName: Full=30S ribosomal protein S2
gi|71846993|gb|AAZ46489.1| SSU ribosomal protein S2P [Dechloromonas aromatica RCB]
Length = 248
Score = 310 bits (794), Expect = 2e-81, Method: Composition-based stats.
Identities = 140/219 (63%), Positives = 182/219 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFG RNKIHI+NLEKTL Y +A+ ++ +L S+GT+
Sbjct: 7 EMLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLASSRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA+RAG PF+DQRWLGG+LTNFKT+KTSI+RLK+M++ + G +
Sbjct: 67 LFVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+ KKEAL F R+ KL + IGGIK M +PDAIF+IDVGYHK A++EA KL IP+IGVV
Sbjct: 127 KMPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSPDG+ YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEGRS 225
>gi|437999973|ref|YP_007183706.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812901|ref|YP_007449354.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339207|gb|AFZ83629.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778870|gb|AGF49750.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 246
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 139/223 (62%), Positives = 180/223 (80%)
Query: 170 LTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGF 229
++ ++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ Y +A+++I +
Sbjct: 1 MSMMREMLEAGVHFGHQTRYWNPKMAQYIFGQRNKIHIINLEKTVEKYLEALKFIKKSAS 60
Query: 230 SKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFIT 289
+ +LFVGTKR AR IA+EA R MP++D RWLGG+LTNFKT+K+SI+RLKEM++ +
Sbjct: 61 ASSNILFVGTKRAAREFIASEASRCNMPYVDSRWLGGMLTNFKTVKSSIKRLKEMEIIVA 120
Query: 290 NGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIP 349
NG+ K+ KKE LLFYR+ KLN+ IGGIKNMN +PD +F+IDVGYHK A+SEA L I
Sbjct: 121 NGNADKMIKKEGLLFYRELDKLNKAIGGIKNMNNLPDIMFVIDVGYHKIAISEARALGIK 180
Query: 350 IIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
++ VVDTNHSPDG++YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 181 VVAVVDTNHSPDGVDYVIPGNDDSAKAIALYCKGISDAVLEGR 223
>gi|238026902|ref|YP_002911133.1| 30S ribosomal protein S2 [Burkholderia glumae BGR1]
gi|237876096|gb|ACR28429.1| 30S ribosomal protein S2 [Burkholderia glumae BGR1]
Length = 246
Score = 310 bits (794), Expect = 3e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK A++EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAITEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>gi|398803837|ref|ZP_10562851.1| ribosomal protein S2 [Polaromonas sp. CF318]
gi|398095701|gb|EJL86036.1| ribosomal protein S2 [Polaromonas sp. CF318]
Length = 250
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 140/223 (62%), Positives = 183/223 (82%), Gaps = 1/223 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFW+PKM+ YIFGHRN+IHIINLEK+L MY++A+++ QL +
Sbjct: 3 TTMREMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMYQEAMKFAKQLSAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 63 RGTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + +SKKE L F R+ KL + IGGI++MN +PDAIF+IDVG+HK A+ EA KL IP+
Sbjct: 123 G-LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
IGVVD+NHSP GI+YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 182 IGVVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224
>gi|91788557|ref|YP_549509.1| 30S ribosomal protein S2 [Polaromonas sp. JS666]
gi|123164796|sp|Q12A31.1|RS2_POLSJ RecName: Full=30S ribosomal protein S2
gi|91697782|gb|ABE44611.1| SSU ribosomal protein S2P [Polaromonas sp. JS666]
Length = 250
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/223 (62%), Positives = 182/223 (81%), Gaps = 1/223 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ YIFGHRN+IHIINLEK+L M++ A+++ QL +
Sbjct: 3 TSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 63 RGTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + +SKKE L F R+ KL + IGGI++MN +PDAIF+IDVG+HK A+ EA KL IP+
Sbjct: 123 G-LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
IGVVD+NHSP GI+YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 182 IGVVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224
>gi|365096683|ref|ZP_09331126.1| 30S ribosomal protein S2 [Acidovorax sp. NO-1]
gi|363413709|gb|EHL20901.1| 30S ribosomal protein S2 [Acidovorax sp. NO-1]
Length = 250
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 181/219 (82%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +++ EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILSAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SLSKKEQLTFSREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVMLYARGIADAIIEGRA 224
>gi|303258055|ref|ZP_07344063.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47]
gi|302859074|gb|EFL82157.1| ribosomal protein S2 [Burkholderiales bacterium 1_1_47]
Length = 249
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKMS YIFG RNKIHIINLEKT+ +++A +++ L KGT+
Sbjct: 5 ELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQKGTI 64
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR +R I EA RAGMP++DQRWLGG+LTNFKT+K S++RLKEM+ + +G++
Sbjct: 65 LFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADGALE 124
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKEAL F R+ KLN+ +GGIK MN +PDA+ ++DVGYHK A+ EA KL IP++G+V
Sbjct: 125 KMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVVGIV 184
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P G++YVIPGNDDSA+++ALY KG DA L+ K
Sbjct: 185 DTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEGK 222
>gi|350544617|ref|ZP_08914202.1| SSU ribosomal protein S2p (SAe) [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527585|emb|CCD37761.1| SSU ribosomal protein S2p (SAe) [Candidatus Burkholderia kirkii
UZHbot1]
Length = 250
Score = 309 bits (791), Expect = 6e-81, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVH GHQTRFWNPKM+ YIFGHRNKIHIINLEKTL +Y A++Y+ QL ++GT
Sbjct: 7 QMLEAGVHLGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPLYNDALKYVRQLAANRGTT 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEAKKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K+++LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKALSLYAEGVTDAILEGR 224
>gi|330998734|ref|ZP_08322463.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859]
gi|329576473|gb|EGG57985.1| ribosomal protein S2 [Parasutterella excrementihominis YIT 11859]
Length = 247
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKMS YIFG RNKIHIINLEKT+ +++A +++ L KGT+
Sbjct: 3 ELLEAGAHFGHQTRFWSPKMSQYIFGSRNKIHIINLEKTVAKFDEAAKFLTNLAAQKGTI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR +R I EA RAGMP++DQRWLGG+LTNFKT+K S++RLKEM+ + +G++
Sbjct: 63 LFVGTKRTSRDAIVAEAKRAGMPYVDQRWLGGMLTNFKTVKVSLKRLKEMEQKVADGALE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKEAL F R+ KLN+ +GGIK MN +PDA+ ++DVGYHK A+ EA KL IP++G+V
Sbjct: 123 KMTKKEALDFTRELEKLNKAMGGIKEMNGLPDALVVVDVGYHKIAIQEANKLGIPVVGIV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P G++YVIPGNDDSA+++ALY KG DA L+ K
Sbjct: 183 DTNHNPAGVDYVIPGNDDSARAVALYAKGFADAILEGK 220
>gi|423017268|ref|ZP_17007989.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans AXX-A]
gi|338779717|gb|EGP44152.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans AXX-A]
Length = 249
Score = 308 bits (790), Expect = 8e-81, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 179/218 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+KTS++RLK+M+ + G
Sbjct: 66 LFVGTKRAARELVAAEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A++EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|399019279|ref|ZP_10721428.1| glutathione S-transferase [Herbaspirillum sp. CF444]
gi|398098426|gb|EJL88713.1| glutathione S-transferase [Herbaspirillum sp. CF444]
Length = 203
Score = 308 bits (788), Expect = 1e-80, Method: Composition-based stats.
Identities = 140/178 (78%), Positives = 165/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+FIH++ LENE+ K + K +++AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFIHVHTLENEKTKAAEKAHEKARAEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVALAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|56478851|ref|YP_160440.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1]
gi|61215383|sp|Q5NZH5.1|RS2_AZOSE RecName: Full=30S ribosomal protein S2
gi|56314894|emb|CAI09539.1| 30S ribosomal protein S2 [Aromatoleum aromaticum EbN1]
Length = 251
Score = 308 bits (788), Expect = 1e-80, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 184/219 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ Y+ +L ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +++ EA RAGMPF+D+RWLGG+LTNFKT+K SI+RLKEM+ + +GSI
Sbjct: 67 LLVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKEAL+ R+ KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL IPI+ VV
Sbjct: 127 RLSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGIPIVAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEGRS 225
>gi|359800345|ref|ZP_09302890.1| 30S ribosomal protein S2 [Achromobacter arsenitoxydans SY8]
gi|359361674|gb|EHK63426.1| 30S ribosomal protein S2 [Achromobacter arsenitoxydans SY8]
Length = 253
Score = 308 bits (788), Expect = 1e-80, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 180/218 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS YIFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 10 EMLEAGVHFGHQTRYWNPKMSQYIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 69
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A+EA R GMP++D RWLGG+LTNFKT+KTS++RLK+M+ + G
Sbjct: 70 LFVGTKRAARELVASEAARCGMPYVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGGAE 129
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A++EA L IP++ VV
Sbjct: 130 RMIKKEGLLFQRELDKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVAVV 189
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 190 DTNHSPEGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 227
>gi|427399768|ref|ZP_18891006.1| hypothetical protein HMPREF9710_00602 [Massilia timonae CCUG 45783]
gi|425721045|gb|EKU83959.1| hypothetical protein HMPREF9710_00602 [Massilia timonae CCUG 45783]
Length = 203
Score = 307 bits (787), Expect = 2e-80, Method: Composition-based stats.
Identities = 140/178 (78%), Positives = 165/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H++ LE+ERNK + K + +AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFVHVHTLESERNKANDKNHDKARAEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|452125154|ref|ZP_21937738.1| 30S ribosomal protein S2 [Bordetella holmesii F627]
gi|452128563|ref|ZP_21941140.1| 30S ribosomal protein S2 [Bordetella holmesii H558]
gi|451924384|gb|EMD74525.1| 30S ribosomal protein S2 [Bordetella holmesii F627]
gi|451925610|gb|EMD75748.1| 30S ribosomal protein S2 [Bordetella holmesii H558]
Length = 249
Score = 307 bits (787), Expect = 2e-80, Method: Composition-based stats.
Identities = 134/218 (61%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ +++A +++ Q+ G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVGKFQEATKFVKQIAARGGNV 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M++ + +GS+
Sbjct: 66 LFVGTKRAARELVAAEAQRCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEVMVADGSVE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L+KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RLTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++Y+IPGNDDSA++I LY KG+ DA L+ +
Sbjct: 186 DTNHSPDGVDYIIPGNDDSARAIELYAKGMADAVLEGR 223
>gi|319793983|ref|YP_004155623.1| 30S ribosomal protein S2 [Variovorax paradoxus EPS]
gi|315596446|gb|ADU37512.1| ribosomal protein S2 [Variovorax paradoxus EPS]
Length = 251
Score = 307 bits (787), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL +
Sbjct: 3 TTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 63 RGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+
Sbjct: 123 G-LDSLSKKEQLTFSREIAKLEKDIGGIQDMAALPDAIFVIDVGFHKIAVAEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IGVVD+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>gi|239815580|ref|YP_002944490.1| 30S ribosomal protein S2 [Variovorax paradoxus S110]
gi|259495228|sp|C5CKS0.1|RS2_VARPS RecName: Full=30S ribosomal protein S2
gi|239802157|gb|ACS19224.1| ribosomal protein S2 [Variovorax paradoxus S110]
Length = 250
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL +
Sbjct: 3 TTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 63 RGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+
Sbjct: 123 G-LDSLSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IGVVD+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>gi|398811738|ref|ZP_10570527.1| ribosomal protein S2 [Variovorax sp. CF313]
gi|398079828|gb|EJL70666.1| ribosomal protein S2 [Variovorax sp. CF313]
Length = 250
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL +
Sbjct: 3 TTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 63 RGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+
Sbjct: 123 G-LDSLSKKEQLTFSREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IGVVD+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>gi|395760593|ref|ZP_10441262.1| stringent starvation protein A [Janthinobacterium lividum PAMC
25724]
Length = 203
Score = 307 bits (786), Expect = 2e-80, Method: Composition-based stats.
Identities = 138/178 (77%), Positives = 166/178 (93%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H+++LE+ER K++ K + +AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFVHVHVLESERAKSNDKAHDKARAEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAVAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|445494235|ref|ZP_21461279.1| stringent starvation protein A [Janthinobacterium sp. HH01]
gi|444790396|gb|ELX11943.1| stringent starvation protein A [Janthinobacterium sp. HH01]
Length = 203
Score = 307 bits (786), Expect = 3e-80, Method: Composition-based stats.
Identities = 138/178 (77%), Positives = 166/178 (93%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H+++LE+ER K++ K + +AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFVHVHVLESERAKSNDKSHDKARAEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAVAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|89900774|ref|YP_523245.1| 30S ribosomal protein S2 [Rhodoferax ferrireducens T118]
gi|123091301|sp|Q21WY9.1|RS2_RHOFD RecName: Full=30S ribosomal protein S2
gi|89345511|gb|ABD69714.1| SSU ribosomal protein S2P [Rhodoferax ferrireducens T118]
Length = 250
Score = 307 bits (786), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 135/219 (61%), Positives = 182/219 (83%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ Q+ +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVSARRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 67 LMVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L+F R+ KL R IGGI++M ++PDAIF+IDVG+HK A++EA KL IP+I VV
Sbjct: 126 SLSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGIPLIAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+Y+IPGNDDS+K++ LY +GI DA ++ ++
Sbjct: 186 DTNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEGRS 224
>gi|422319094|ref|ZP_16400176.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans C54]
gi|317406268|gb|EFV86512.1| 30S ribosomal protein S2 [Achromobacter xylosoxidans C54]
Length = 249
Score = 307 bits (786), Expect = 3e-80, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 179/218 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFGHRNKIHIINLEKT+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIINLEKTVDKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+KTS++RLK+M+ + G
Sbjct: 66 LFVGTKRAARELVAAEAARCGMPFVDARWLGGMLTNFKTVKTSVKRLKDMEAVVAEGGAE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK A++EA L IP++ VV
Sbjct: 126 RMIKKEGLLFQRELEKLNKSIGGIKDMNGLPDAMFVIDVGYHKIAIAEAKTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK+IALY KGI DA L+ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAIALYAKGIADAVLEGR 223
>gi|456063594|ref|YP_007502564.1| ribosomal protein S2 [beta proteobacterium CB]
gi|455440891|gb|AGG33829.1| ribosomal protein S2 [beta proteobacterium CB]
Length = 249
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 179/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+P+M+ YIFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+
Sbjct: 7 QMLEAGCHFGHQTRFWSPRMAPYIFGHRNKIHIINLEKTLPMFQDALKFAKQVAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M + G
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAKEAGDWE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R KL + +GGI+++N +PDAIF++DVGYHK A++EA KL IP+I VV
Sbjct: 127 KLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+K++ LY +GI DA L+ K+
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKS 225
>gi|134096204|ref|YP_001101279.1| stringent starvation protein A [Herminiimonas arsenicoxydans]
gi|133740107|emb|CAL63158.1| putative stringent starvation protein A [Herminiimonas
arsenicoxydans]
Length = 203
Score = 306 bits (785), Expect = 3e-80, Method: Composition-based stats.
Identities = 139/178 (78%), Positives = 165/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+FIH+++LEN++ ++ K ++AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFIHVHVLENDKGRSGEKAQEKARNEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|33592517|ref|NP_880161.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I]
gi|33596174|ref|NP_883817.1| 30S ribosomal protein S2 [Bordetella parapertussis 12822]
gi|33601582|ref|NP_889142.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50]
gi|384203821|ref|YP_005589560.1| 30S ribosomal protein S2 [Bordetella pertussis CS]
gi|408415054|ref|YP_006625761.1| 30S ribosomal protein S2 [Bordetella pertussis 18323]
gi|410420303|ref|YP_006900752.1| 30S ribosomal protein S2 [Bordetella bronchiseptica MO149]
gi|410473057|ref|YP_006896338.1| 30S ribosomal protein S2 [Bordetella parapertussis Bpp5]
gi|412337751|ref|YP_006966506.1| 30S ribosomal protein S2 [Bordetella bronchiseptica 253]
gi|427814780|ref|ZP_18981844.1| 30S ribosomal protein S2 [Bordetella bronchiseptica 1289]
gi|427819117|ref|ZP_18986180.1| 30S ribosomal protein S2 [Bordetella bronchiseptica D445]
gi|427822229|ref|ZP_18989291.1| 30S ribosomal protein S2 [Bordetella bronchiseptica Bbr77]
gi|61215727|sp|Q7VYD0.1|RS2_BORPE RecName: Full=30S ribosomal protein S2
gi|61215733|sp|Q7WA60.1|RS2_BORPA RecName: Full=30S ribosomal protein S2
gi|61215734|sp|Q7WJ94.1|RS2_BORBR RecName: Full=30S ribosomal protein S2
gi|33572163|emb|CAE41709.1| 30S ribosomal protein S2 [Bordetella pertussis Tohama I]
gi|33573177|emb|CAE36829.1| 30S ribosomal protein S2 [Bordetella parapertussis]
gi|33576018|emb|CAE33098.1| 30S ribosomal protein S2 [Bordetella bronchiseptica RB50]
gi|332381935|gb|AEE66782.1| 30S ribosomal protein S2 [Bordetella pertussis CS]
gi|401777224|emb|CCJ62501.1| 30S ribosomal protein S2 [Bordetella pertussis 18323]
gi|408443167|emb|CCJ49771.1| 30S ribosomal protein S2 [Bordetella parapertussis Bpp5]
gi|408447598|emb|CCJ59274.1| 30S ribosomal protein S2 [Bordetella bronchiseptica MO149]
gi|408767585|emb|CCJ52339.1| 30S ribosomal protein S2 [Bordetella bronchiseptica 253]
gi|410565780|emb|CCN23338.1| 30S ribosomal protein S2 [Bordetella bronchiseptica 1289]
gi|410570117|emb|CCN18264.1| 30S ribosomal protein S2 [Bordetella bronchiseptica D445]
gi|410587494|emb|CCN02537.1| 30S ribosomal protein S2 [Bordetella bronchiseptica Bbr77]
Length = 249
Score = 306 bits (783), Expect = 5e-80, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 66 LFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 186 DTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>gi|119898200|ref|YP_933413.1| 30S ribosomal protein S2 [Azoarcus sp. BH72]
gi|166225238|sp|A1K6S1.1|RS2_AZOSB RecName: Full=30S ribosomal protein S2
gi|119670613|emb|CAL94526.1| 30S ribosomal protein S2 [Azoarcus sp. BH72]
Length = 251
Score = 306 bits (783), Expect = 5e-80, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 184/219 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ ++ +L ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQAR ++A EA RAGMP++D+RWLGG+LTNFKT+K SI+RLKE++ I +GSI
Sbjct: 67 LFVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMIEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSK+EAL R+ KL + IGGIK+M +PDAIFIIDVGYHK AV+EA KL IP++GVV
Sbjct: 127 RLSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+Y+IPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEGRS 225
>gi|451812175|ref|YP_007448629.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778077|gb|AGF49025.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 246
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 177/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS YIFG RNKIHIINLEKT+ Y +A+++I + S +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMSQYIFGQRNKIHIINLEKTVEKYLEALKFIKKSSSSGSNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A+EA R MP++D RWLGG+LTNFKT+K+SI+RLKEM+ + +G+
Sbjct: 66 LFVGTKRAAREFVASEASRCNMPYVDSRWLGGMLTNFKTVKSSIKRLKEMESIVASGNAD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+ KKE LLF+R+ KLN+ IGGIKNMN +PD IFIIDVGYHK A+SEA L I ++ VV
Sbjct: 126 KMIKKEGLLFHRELDKLNKSIGGIKNMNNLPDIIFIIDVGYHKIAISEARALGIKVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++YVIPGNDDSAK+I+LY KGI DA L+ +
Sbjct: 186 DTNHSPDGVDYVIPGNDDSAKAISLYCKGIADAVLEGR 223
>gi|409407886|ref|ZP_11256337.1| stringent starvation transcription regulator A protein
[Herbaspirillum sp. GW103]
gi|386433637|gb|EIJ46463.1| stringent starvation transcription regulator A protein
[Herbaspirillum sp. GW103]
Length = 184
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 164/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 6 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 65
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H++ LENE++K + K ++AR EIRDRL LAPLFLKNKYM
Sbjct: 66 LMRARARLMLFNFEKELFVHVHTLENEKSKAAEKNQEKARHEIRDRLTQLAPLFLKNKYM 125
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 126 LGDEFSMLDVALAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 183
>gi|145589632|ref|YP_001156229.1| 30S ribosomal protein S2 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189045005|sp|A4SYV1.1|RS2_POLSQ RecName: Full=30S ribosomal protein S2
gi|145048038|gb|ABP34665.1| SSU ribosomal protein S2P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 249
Score = 305 bits (782), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 178/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+
Sbjct: 7 QMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVASNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M + G
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAKEAGDWE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R KL + +GGI+++N +PDAIF++DVGYHK A++EA KL IP+I VV
Sbjct: 127 KLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+K++ LY +GI DA L+ K
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKA 225
>gi|415911014|ref|ZP_11553335.1| Stringent starvation protein A [Herbaspirillum frisingense GSF30]
gi|407762328|gb|EKF71199.1| Stringent starvation protein A [Herbaspirillum frisingense GSF30]
Length = 179
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 138/178 (77%), Positives = 164/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 1 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H++ LENE++K + K ++AR EIRDRL LAPLFLKNKYM
Sbjct: 61 LMRARARLMLFNFEKELFVHVHTLENEKSKAAEKNQEKARNEIRDRLTQLAPLFLKNKYM 120
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 121 LGDEFSMLDVALAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 178
>gi|329904252|ref|ZP_08273727.1| Stringent starvation protein A [Oxalobacteraceae bacterium
IMCC9480]
gi|327548076|gb|EGF32805.1| Stringent starvation protein A [Oxalobacteraceae bacterium
IMCC9480]
Length = 203
Score = 305 bits (781), Expect = 8e-80, Method: Composition-based stats.
Identities = 138/178 (77%), Positives = 166/178 (93%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H++ LEN+++K + K ++AR+EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFVHVHTLENDKSKGAEKLQEKARQEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAVAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|407000735|gb|EKE17939.1| hypothetical protein ACD_10C00203G0002 [uncultured bacterium]
Length = 250
Score = 305 bits (781), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 179/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTRFW PKM+ YIFG RNKIHI+NLE+TL Y +A+ ++ +L ++G +
Sbjct: 7 QMLEAGIHFGHQTRFWCPKMAPYIFGARNKIHIVNLEQTLAKYNEAVSFVKKLSANRGNV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQAR +I EA+RAG ++DQRWLGG+LTNFKT++TSI RLKE++L + G +
Sbjct: 67 LFVCTKRQAREIIGEEALRAGASYVDQRWLGGMLTNFKTVRTSINRLKELELAVEAGDLE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKEAL F R+ KL + IGGIKNM +PDAIF+IDVGYHK A++EA KL+IPIIGVV
Sbjct: 127 RMPKKEALTFRRELEKLQKSIGGIKNMTGLPDAIFVIDVGYHKIAITEAGKLSIPIIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP G++YVIPGNDDS+++I LY +GI DA L+ ++
Sbjct: 187 DTNHSPVGVSYVIPGNDDSSRAIQLYARGIADAILEGRS 225
>gi|91775883|ref|YP_545639.1| 30S ribosomal protein S2 [Methylobacillus flagellatus KT]
gi|122985511|sp|Q1H139.1|RS2_METFK RecName: Full=30S ribosomal protein S2
gi|91709870|gb|ABE49798.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT]
Length = 249
Score = 305 bits (781), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 175/218 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL ++E A++Y+ QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAG P+++ RWLGG+LTNFKT+K SI+RL E + + +G I
Sbjct: 67 LFVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALLQDGGIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GAV+EA KL IP+IGVV
Sbjct: 127 KFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SP+G+ YVIPGNDDS+++I LY +GI DA L+ +
Sbjct: 187 DTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>gi|388567362|ref|ZP_10153796.1| ribosomal protein s2 [Hydrogenophaga sp. PBC]
gi|388265384|gb|EIK90940.1| ribosomal protein s2 [Hydrogenophaga sp. PBC]
Length = 250
Score = 304 bits (778), Expect = 2e-79, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHI+NLEKTL M+ A +++ QL ++GTL
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIVNLEKTLPMFHDAQKFVRQLSANRGTL 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQ+R ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQSRDIVAQEARRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMQAQKEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AV EA KL IP++GVV
Sbjct: 126 NMSKKEQLMFSREMEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAVLEAQKLGIPLVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP GI+YVIPGNDDSA+++ALY +GI DA L+ +
Sbjct: 186 DTNHSPMGIDYVIPGNDDSARAVALYARGIADAVLEGR 223
>gi|260220935|emb|CBA29001.1| 30S ribosomal protein S2 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 250
Score = 304 bits (778), Expect = 2e-79, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A +++ QL +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFVRQLSAKRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 67 LMVGTKRQAREIVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKVQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVGYHK A++EA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFARELEKLEKDIGGIQDMNTLPDAIFVIDVGYHKIAIAEARKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDS+K++ LY +GI DA L+ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGR 223
>gi|152981689|ref|YP_001354958.1| stringent starvation protein A [Janthinobacterium sp. Marseille]
gi|151281766|gb|ABR90176.1| stringent starvation protein A [Janthinobacterium sp. Marseille]
Length = 203
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/178 (78%), Positives = 164/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDVDLFNKPEDISTMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+FIH++ LEN++ ++ K ++AR EIRDRL TLAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFIHVHTLENDKGRSGEKIQEKARNEIRDRLTTLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|171463271|ref|YP_001797384.1| 30S ribosomal protein S2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470517|sp|B1XTU3.1|RS2_POLNS RecName: Full=30S ribosomal protein S2
gi|171192809|gb|ACB43770.1| ribosomal protein S2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 249
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 178/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+
Sbjct: 7 QMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M++ G
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMEVAKEAGDWE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLS+KEAL R KL + +GGIK++N IPDAIF++DVGYHK A++EA KL IP+I VV
Sbjct: 127 KLSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+K++ LY GI +A L+ K
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKA 225
>gi|300313332|ref|YP_003777424.1| stringent starvation transcription regulator A protein
[Herbaspirillum seropedicae SmR1]
gi|398835135|ref|ZP_10592509.1| glutathione S-transferase [Herbaspirillum sp. YR522]
gi|300076117|gb|ADJ65516.1| stringent starvation transcription regulator A protein
[Herbaspirillum seropedicae SmR1]
gi|398217239|gb|EJN03762.1| glutathione S-transferase [Herbaspirillum sp. YR522]
Length = 203
Score = 303 bits (777), Expect = 3e-79, Method: Composition-based stats.
Identities = 138/178 (77%), Positives = 164/178 (92%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML NFEKE+F+H++ LENE++K + K ++AR EIRDRL LAPLFLKNKYM
Sbjct: 85 LMRARARLMLFNFEKELFVHVHTLENEKSKAAEKSQEKARNEIRDRLTQLAPLFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVALAPLLWRLDHYGIELSKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|222110426|ref|YP_002552690.1| 30S ribosomal protein S2 [Acidovorax ebreus TPSY]
gi|254764474|sp|B9MGL7.1|RS2_DIAST RecName: Full=30S ribosomal protein S2
gi|221729870|gb|ACM32690.1| ribosomal protein S2 [Acidovorax ebreus TPSY]
Length = 250
Score = 303 bits (777), Expect = 3e-79, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA LD +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGR 223
>gi|358637387|dbj|BAL24684.1| 30S ribosomal protein S2 [Azoarcus sp. KH32C]
Length = 251
Score = 303 bits (776), Expect = 3e-79, Method: Composition-based stats.
Identities = 135/221 (61%), Positives = 183/221 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTRFWNP+M+ YIFG RNKIHI+NLEKTL Y +A+ YI +L ++G +
Sbjct: 7 QMLEAGIHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTLAKYNEAMDYIRKLSANRGNV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQ+R ++A EA RAG+PF+D+RWLGG+LTNFKT+K SI+RLKEM+ + +GSI
Sbjct: 67 LMVGTKRQSREIVAEEARRAGVPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKEAL+ R+ KL + IGGIK+M +PDA+F+IDVGYHK AV+EA KL IP+I VV
Sbjct: 127 RLSKKEALMASREMDKLQKSIGGIKDMGGLPDALFVIDVGYHKIAVTEAKKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTNHSP+G++Y+IPGNDDS+++I LY +G+ DA L+ + +
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSRAIRLYARGVADAVLEGRALA 227
>gi|319762175|ref|YP_004126112.1| 30S ribosomal protein S2 [Alicycliphilus denitrificans BC]
gi|330826013|ref|YP_004389316.1| 30S ribosomal protein S2 [Alicycliphilus denitrificans K601]
gi|317116736|gb|ADU99224.1| ribosomal protein S2 [Alicycliphilus denitrificans BC]
gi|329311385|gb|AEB85800.1| ribosomal protein S2 [Alicycliphilus denitrificans K601]
Length = 250
Score = 303 bits (775), Expect = 4e-79, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVGYHK AV+EA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFSRELEKLEKDIGGIQDMNALPDAIFVIDVGYHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA L+ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGR 223
>gi|337279380|ref|YP_004618852.1| 30S ribosomal protein S2 [Ramlibacter tataouinensis TTB310]
gi|334730457|gb|AEG92833.1| candidate 30S ribosomal protein S2 [Ramlibacter tataouinensis
TTB310]
Length = 250
Score = 303 bits (775), Expect = 5e-79, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 186/219 (84%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKFVKQLSANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++++EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREIVSSEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AVSEA KL IP++GVV
Sbjct: 126 SMSKKEQLMFQREMEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVSEAKKLGIPLVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+NHSP+GI+YVIPGNDDS+K++ LY +GI DA L+ ++
Sbjct: 186 DSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGRS 224
>gi|124267168|ref|YP_001021172.1| 30S ribosomal protein S2 [Methylibium petroleiphilum PM1]
gi|124259943|gb|ABM94937.1| SSU ribosomal protein S2P [Methylibium petroleiphilum PM1]
Length = 240
Score = 302 bits (774), Expect = 6e-79, Method: Composition-based stats.
Identities = 139/217 (64%), Positives = 180/217 (82%), Gaps = 1/217 (0%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL ++ +A+++ L +GT+L
Sbjct: 1 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPLFNEAMKFTRSLAAKRGTIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
VGTKRQAR V+A EA RAGMP++DQRWLGG+LTNFKT+K S+++LKEM G +
Sbjct: 61 MVGTKRQAREVVAQEAQRAGMPYVDQRWLGGMLTNFKTVKGSLKKLKEMQAQQEAG-LES 119
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
+SKKEALLF R+ KL + IGGI++MN +PDA+F+IDVGYHK A++EA KL IP+IGVVD
Sbjct: 120 MSKKEALLFAREIAKLEKDIGGIQDMNALPDAMFVIDVGYHKIAIAEAKKLGIPVIGVVD 179
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+NHSP+GI+YVIPGNDDSAK++ALY + + DA L+ K
Sbjct: 180 SNHSPEGIDYVIPGNDDSAKAVALYARAVADAALEGK 216
>gi|451936421|ref|YP_007460275.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777344|gb|AGF48319.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 246
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 177/223 (79%)
Query: 170 LTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGF 229
++ ++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ Y +A++++ +
Sbjct: 1 MSMMREMLEAGVHFGHQTRYWNPKMAQYIFGQRNKIHIINLEKTVENYLEALKFVKKSSS 60
Query: 230 SKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFIT 289
S +LFVGTKR AR IA+EA R MP++D RWLGG+LTNFKT+K+SI+RLKEM+ +
Sbjct: 61 SNNNILFVGTKRAAREFIASEASRCNMPYVDSRWLGGMLTNFKTVKSSIKRLKEMENIVA 120
Query: 290 NGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIP 349
+G K+ KKE LLF+R+ KLN+ IGGIKNMN +PD IFI+DVGYHK A+SEA L I
Sbjct: 121 SGHADKMIKKEGLLFHRELDKLNKSIGGIKNMNNLPDTIFIVDVGYHKIAISEARALGIK 180
Query: 350 IIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
++ VVDTNHSPDG++YVIPGNDDSAK+I+ Y KGI DA L+ +
Sbjct: 181 VVAVVDTNHSPDGVDYVIPGNDDSAKAISFYCKGIADAVLEGR 223
>gi|424776703|ref|ZP_18203681.1| 30S ribosomal protein S2 [Alcaligenes sp. HPC1271]
gi|422888126|gb|EKU30517.1| 30S ribosomal protein S2 [Alcaligenes sp. HPC1271]
Length = 246
Score = 302 bits (773), Expect = 7e-79, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RN IHIINLEKT+ YE+A +++ QL G +
Sbjct: 3 EMLEAGVHFGHQTRYWNPKMAPFIFGQRNNIHIINLEKTVVQYEEATKFVRQLAARGGNV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG++TNFKT+KTSI+RLKEM+ + G +
Sbjct: 63 LFVGTKRAARELVAAEAERCGMPYVDSRWLGGMMTNFKTVKTSIKRLKEMEAQMAEGRLE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 123 TMSKKEALMFERELEKLNKAIGGIKDMNNLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDSAK+IALY +G+ DA L +
Sbjct: 183 DTNHSPEGLDYVIPGNDDSAKAIALYARGMADAVLAGR 220
>gi|375106241|ref|ZP_09752502.1| ribosomal protein S2 [Burkholderiales bacterium JOSHI_001]
gi|374666972|gb|EHR71757.1| ribosomal protein S2 [Burkholderiales bacterium JOSHI_001]
Length = 247
Score = 302 bits (773), Expect = 8e-79, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YI+GHRNKIHIINLEKTL +E A++++ QL +G++
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTLPAFEDAMKFVRQLASKRGSI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR VIA EA+R+GMP++DQRWLGG+LTNFKT+K S+++LK+M + G +
Sbjct: 67 LMVGTKRQAREVIAMEALRSGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQVTKEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L+KKE L+F R+ KL + IGGI++MN +PDA+F+IDVGYHK AV+EA KL IP+IGVV
Sbjct: 126 QLTKKEGLMFERELAKLEKDIGGIQDMNALPDAMFVIDVGYHKIAVAEAKKLGIPVIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK++ALY K + +A L+ K
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVALYAKAVAEAVLEGK 223
>gi|347820619|ref|ZP_08874053.1| 30S ribosomal protein S2 [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 250
Score = 301 bits (772), Expect = 1e-78, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A +++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILATEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKTQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M ++PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SLSKKEQLTFSREIEKLEKDIGGIQDMAVLPDAIFIIDVGFHKIAVAEAKKLGIPMIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA +D +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIVDGR 223
>gi|121604660|ref|YP_981989.1| 30S ribosomal protein S2 [Polaromonas naphthalenivorans CJ2]
gi|166225293|sp|A1VN40.1|RS2_POLNA RecName: Full=30S ribosomal protein S2
gi|120593629|gb|ABM37068.1| SSU ribosomal protein S2P [Polaromonas naphthalenivorans CJ2]
Length = 250
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 179/219 (81%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFGHRN+IHIINLEK+L M+++A+++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLTANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKR AR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 67 LMVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK A+ EA KL IP+IGVV
Sbjct: 126 SISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP GI+YVIPGNDDS+K++ALY +GI DA ++ +
Sbjct: 186 DTNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRA 224
>gi|121594923|ref|YP_986819.1| 30S ribosomal protein S2 [Acidovorax sp. JS42]
gi|166225233|sp|A1W918.1|RS2_ACISJ RecName: Full=30S ribosomal protein S2
gi|120607003|gb|ABM42743.1| SSU ribosomal protein S2P [Acidovorax sp. JS42]
Length = 250
Score = 301 bits (770), Expect = 1e-78, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA L+ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGR 223
>gi|393757793|ref|ZP_10346617.1| 30S ribosomal protein S2 [Alcaligenes faecalis subsp. faecalis NCIB
8687]
gi|393165485|gb|EJC65534.1| 30S ribosomal protein S2 [Alcaligenes faecalis subsp. faecalis NCIB
8687]
Length = 249
Score = 301 bits (770), Expect = 2e-78, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RN IHIINLEKT+ YE+A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPFIFGQRNNIHIINLEKTVVQYEEATKFLRQLAARGGNV 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG++TNFKT+KTSI+RLKEM+ + G +
Sbjct: 66 LFVGTKRAARELVAAEAERCGMPYVDSRWLGGMMTNFKTVKTSIKRLKEMEGQMAEGRLE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 TMSKKEALMFERELEKLNKAIGGIKDMNNLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDSAK+IALY +G+ DA L +
Sbjct: 186 DTNHSPEGLDYVIPGNDDSAKAIALYARGMADAVLAGR 223
>gi|241764757|ref|ZP_04762766.1| ribosomal protein S2 [Acidovorax delafieldii 2AN]
gi|241365747|gb|EER60419.1| ribosomal protein S2 [Acidovorax delafieldii 2AN]
Length = 250
Score = 301 bits (770), Expect = 2e-78, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 67 LMVGTKRQAREILATEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQLETG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SLSKKEQLTFSREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGR 223
>gi|160900380|ref|YP_001565962.1| 30S ribosomal protein S2 [Delftia acidovorans SPH-1]
gi|333913546|ref|YP_004487278.1| 30S ribosomal protein S2 [Delftia sp. Cs1-4]
gi|238687161|sp|A9BMN2.1|RS2_DELAS RecName: Full=30S ribosomal protein S2
gi|160365964|gb|ABX37577.1| ribosomal protein S2 [Delftia acidovorans SPH-1]
gi|333743746|gb|AEF88923.1| ribosomal protein S2 [Delftia sp. Cs1-4]
Length = 250
Score = 300 bits (769), Expect = 2e-78, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A +++ QL + GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLASNGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 67 LMVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AV+EA KL IP++GVV
Sbjct: 126 AMSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGIPLVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 186 DSNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>gi|291614114|ref|YP_003524271.1| 30S ribosomal protein S2 [Sideroxydans lithotrophicus ES-1]
gi|291584226|gb|ADE11884.1| ribosomal protein S2 [Sideroxydans lithotrophicus ES-1]
Length = 240
Score = 300 bits (768), Expect = 3e-78, Method: Composition-based stats.
Identities = 134/218 (61%), Positives = 178/218 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHI+NLEKT+ M+ A++ + ++ KGT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIVNLEKTVVMFNDALKEVRKIAAKKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQAR +I EA R G PF+D RWLGG+LTNFKT++TSI+RL+E++ I +GSI
Sbjct: 67 LFVATKRQAREIIREEAQRCGSPFVDHRWLGGMLTNFKTVQTSIKRLRELETMIEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKE L+ R+ KL+R +GGIK++ +P AIF+IDVGY KG V+EA KL IP+IGVV
Sbjct: 127 KVSKKEGLVLRRELEKLDRSLGGIKDLQGLPSAIFVIDVGYQKGTVTEAQKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 187 DTNHSPLGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>gi|257094444|ref|YP_003168085.1| 30S ribosomal protein S2 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046968|gb|ACV36156.1| ribosomal protein S2 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 247
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 129/223 (57%), Positives = 179/223 (80%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE+TL Y +A+ ++ +L +
Sbjct: 3 TTMRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIVNLEQTLAKYNEAMTFVRRLSAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
KG++LFV TKRQAR ++A EA R P+++QRWLGG+LTNFKTIK SI+R+K+M+ +
Sbjct: 63 KGSILFVSTKRQAREIMAEEATRCASPYVEQRWLGGMLTNFKTIKQSIKRIKDMEAMSDD 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
GS+ +L KKEAL+ R+ K+ + IGGIK+M +PDA+F+IDVGYHK A++EA KL IP+
Sbjct: 123 GSLARLGKKEALMMTRELDKMQKSIGGIKDMVSLPDALFVIDVGYHKIAITEANKLGIPV 182
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
+ VVDTNHSP G++YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 183 VAVVDTNHSPKGVDYVIPGNDDSSRAIRLYARGVADAVLEGRS 225
>gi|312795872|ref|YP_004028794.1| Stringent starvation protein A [Burkholderia rhizoxinica HKI 454]
gi|312167647|emb|CBW74650.1| Stringent starvation protein A [Burkholderia rhizoxinica HKI 454]
Length = 229
Score = 300 bits (767), Expect = 4e-78, Method: Composition-based stats.
Identities = 136/178 (76%), Positives = 162/178 (91%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 51 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 110
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ KT+ K ++RAR IRDRL LAP+F+KNKYM
Sbjct: 111 VQRARARLFLLNFEKELFVHVGTLENEKGKTAEKAHERARAAIRDRLTQLAPIFVKNKYM 170
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 171 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 228
>gi|296136579|ref|YP_003643821.1| 30S ribosomal protein S2 [Thiomonas intermedia K12]
gi|410694282|ref|YP_003624904.1| 30S ribosomal protein S2 [Thiomonas sp. 3As]
gi|294340707|emb|CAZ89099.1| 30S ribosomal protein S2 [Thiomonas sp. 3As]
gi|295796701|gb|ADG31491.1| ribosomal protein S2 [Thiomonas intermedia K12]
Length = 252
Score = 299 bits (766), Expect = 5e-78, Method: Composition-based stats.
Identities = 134/218 (61%), Positives = 176/218 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YI+GHRNKIHI+NLEKTL MY +A ++ QL +GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIVNLEKTLPMYLEAAKFARQLAARRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQA ++ +A R GMP++DQRWLGG+LTNFKT+KTSI++LK+M G +
Sbjct: 67 LFVGTKRQAGEIVREQAERCGMPYVDQRWLGGMLTNFKTVKTSIKKLKDMQAQAAEGVLE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEAL F R+ KL + IGGI++M +PDAIF+IDVGYHK A++EA L IP+IGVV
Sbjct: 127 QMSKKEALTFQREMDKLEKSIGGIQDMAALPDAIFVIDVGYHKIAIAEAKTLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP G+ ++IPGNDDSAK++ LY +G+ DA L+ K
Sbjct: 187 DTNHSPLGVTHIIPGNDDSAKAVMLYAQGMADAILEGK 224
>gi|253996537|ref|YP_003048601.1| 30S ribosomal protein S2 [Methylotenera mobilis JLW8]
gi|253983216|gb|ACT48074.1| ribosomal protein S2 [Methylotenera mobilis JLW8]
Length = 245
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 177/219 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RNKIHI+NLEKTL M+E A++++ L +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RAG +++ RWLGG+LTNFKT+K SI+RL++ ++ + +GS+
Sbjct: 67 LFVGTKRQARDIVKEEATRAGCAYVNHRWLGGMLTNFKTVKQSIKRLQDFEVMLQDGSLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GA++EA KL IP+IGVV
Sbjct: 127 KFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN+SPDG+ YVIPGNDDS+++I LY +GI DA L+ ++
Sbjct: 187 DTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRS 225
>gi|171059531|ref|YP_001791880.1| 30S ribosomal protein S2 [Leptothrix cholodnii SP-6]
gi|238689084|sp|B1XXJ5.1|RS2_LEPCP RecName: Full=30S ribosomal protein S2
gi|170776976|gb|ACB35115.1| ribosomal protein S2 [Leptothrix cholodnii SP-6]
Length = 248
Score = 299 bits (765), Expect = 6e-78, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKT+ ++ +A +Y QL +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLAGKRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR V+A EA RAGMPF++ RWLGG+LTNFKT+K S+++LKEM + G+ +
Sbjct: 67 LFVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQVEAGT-Q 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KKEAL+F R+ KL + IGGI++MN +PDA+F+IDVG+HK A++EA KL IP+IGVV
Sbjct: 126 PAIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGIPVIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP GI+YVIPGNDDSAK++ALY + + DA ++ K
Sbjct: 186 DTNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGK 223
>gi|383758592|ref|YP_005437577.1| 30S ribosomal protein S2 [Rubrivivax gelatinosus IL144]
gi|381379261|dbj|BAL96078.1| 30S ribosomal protein S2 RpsB [Rubrivivax gelatinosus IL144]
Length = 247
Score = 298 bits (764), Expect = 8e-78, Method: Composition-based stats.
Identities = 137/218 (62%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YI+GHRNKIHIINLEKT ++E A++++ QL +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSARRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L +GTKRQAR V+A EA R GMP++DQRWLGG+LTNFKT+K S+++LK+M G +
Sbjct: 67 LMIGTKRQAREVVAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEAG-ME 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKEALLF R+ +KL + IGGI++M+ +PDA+F+IDVGYHK AV+EA KL IP+IGVV
Sbjct: 126 QMIKKEALLFDRELVKLEKDIGGIQDMSALPDAMFVIDVGYHKIAVAEAKKLGIPVIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP GI+YVIPGNDDSAK++ALY + + DA L+ K
Sbjct: 186 DTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGK 223
>gi|407938519|ref|YP_006854160.1| 30S ribosomal protein S2 [Acidovorax sp. KKS102]
gi|407896313|gb|AFU45522.1| 30S ribosomal protein S2 [Acidovorax sp. KKS102]
Length = 250
Score = 298 bits (764), Expect = 9e-78, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILATEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 NLSKKEQLTFSREIEKLEKDIGGIQDMAALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGR 223
>gi|421745616|ref|ZP_16183463.1| stringent starvation protein A [Cupriavidus necator HPC(L)]
gi|409775895|gb|EKN57337.1| stringent starvation protein A [Cupriavidus necator HPC(L)]
Length = 203
Score = 298 bits (763), Expect = 1e-77, Method: Composition-based stats.
Identities = 136/178 (76%), Positives = 162/178 (91%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+Y+LENE+ KT+ K ++RAR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVYVLENEKGKTAEKSHERARGAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|351728180|ref|ZP_08945871.1| 30S ribosomal protein S2 [Acidovorax radicis N35]
Length = 250
Score = 298 bits (763), Expect = 1e-77, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +++ EA+RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILSTEALRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SLSKKEQLTFSREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDSAK++ LY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVTLYARGIADAIIEGR 223
>gi|332527870|ref|ZP_08403907.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2]
gi|332112447|gb|EGJ12240.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2]
Length = 247
Score = 298 bits (763), Expect = 1e-77, Method: Composition-based stats.
Identities = 137/218 (62%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YI+GHRNKIHIINLEKT ++E A++++ QL +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSARRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L +GTKRQAR VIA EA R GMP++DQRWLGG+LTNFKT+K S+++LK+M G +
Sbjct: 67 LMIGTKRQAREVIAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEAG-ME 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKEALLF R+ +KL + IGGI++M +PDA+F+IDVGYHK AV+EA KL IP+IGVV
Sbjct: 126 QMIKKEALLFDRELVKLEKDIGGIQDMGALPDAMFVIDVGYHKIAVAEAKKLGIPVIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP GI+YVIPGNDDSAK++ALY + + DA L+ +
Sbjct: 186 DTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGR 223
>gi|385329348|ref|YP_005883651.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha710]
gi|308390199|gb|ADO32519.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha710]
Length = 242
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/224 (62%), Positives = 171/224 (76%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
SL ++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L
Sbjct: 2 SLITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLV 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+KGT+LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E +
Sbjct: 62 ANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAAL 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
N + SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL I
Sbjct: 122 ENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
P+I VVDTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 182 PVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|269214597|ref|ZP_05986884.2| ribosomal protein S2 [Neisseria lactamica ATCC 23970]
gi|269209357|gb|EEZ75812.1| ribosomal protein S2 [Neisseria lactamica ATCC 23970]
Length = 253
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 19 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 78
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 79 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 138
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 139 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 198
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 199 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 236
>gi|332530835|ref|ZP_08406761.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624]
gi|332039747|gb|EGI76147.1| 30S ribosomal protein S2 [Hylemonella gracilis ATCC 19624]
Length = 249
Score = 297 bits (761), Expect = 2e-77, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHR+KIHIINLEK+L M+++A ++ QL +GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRSKIHIINLEKSLPMFQEAAKFAKQLAARRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA RAG+P++DQRWLGG+LTNFKT+KTS++RLK+M + G +
Sbjct: 67 LFVGTKRTAREIVAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSLKRLKDMKVQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AV+EA KL IP+IGVV
Sbjct: 126 AMSKKEQLMFQRELEKLEKDIGGIQDMATLPDAIFVIDVGYHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDS+K++ LY +GI DA L+ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAILEGR 223
>gi|393778345|ref|ZP_10366619.1| stringent starvation protein a [Ralstonia sp. PBA]
gi|392714616|gb|EIZ02216.1| stringent starvation protein a [Ralstonia sp. PBA]
Length = 203
Score = 297 bits (761), Expect = 2e-77, Method: Composition-based stats.
Identities = 135/178 (75%), Positives = 162/178 (91%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+Y+LENE+ K + KG+++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLFNFEKELFSHVYVLENEKGKAAEKGHEKARAAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|385336696|ref|YP_005890643.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae TCDC-NG08107]
gi|317165239|gb|ADV08780.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 237
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 3 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 63 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 123 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 183 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 220
>gi|114332001|ref|YP_748223.1| 30S ribosomal protein S2 [Nitrosomonas eutropha C91]
gi|122313295|sp|Q0AEH4.1|RS2_NITEC RecName: Full=30S ribosomal protein S2
gi|114309015|gb|ABI60258.1| SSU ribosomal protein S2P [Nitrosomonas eutropha C91]
Length = 251
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 173/218 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE TL M+ A+ Y +L +K T+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAANKETI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G P+++QRWLGG+LTNFKTI+ SI+RL++M+ + +G++
Sbjct: 67 LFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDGTLN 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKEAL F R+ KLN +GGIK M +PDA+F+IDVGY KG + EA KL IP++GVV
Sbjct: 127 KLVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P GI YVIPGNDDS+++I LY + + DA L+ +
Sbjct: 187 DTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGR 224
>gi|217970580|ref|YP_002355814.1| 30S ribosomal protein S2 [Thauera sp. MZ1T]
gi|217507907|gb|ACK54918.1| ribosomal protein S2 [Thauera sp. MZ1T]
Length = 251
Score = 297 bits (760), Expect = 2e-77, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 181/219 (82%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ ++ +L ++G +
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMAKYNEAMEFVRKLAANRGNI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FV TKRQAR +IA EA RAGMP++D+RWLGG+LTNFKT+K SI+RLKE++ + +GSI
Sbjct: 67 MFVSTKRQAREIIAEEAQRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMMEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSK+EAL R+ KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL IP++ VV
Sbjct: 127 RLSKREALTVRRELEKLQKSIGGIKDMGGLPDALFVIDVGYHKIAITEAQKLGIPVVAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+++I LY +G+ DA L ++
Sbjct: 187 DTNHSPEGVDYLIPGNDDSSRAIRLYARGVADAVLQGRS 225
>gi|121635755|ref|YP_976000.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18]
gi|313667570|ref|YP_004047854.1| 30S ribosomal protein S2 [Neisseria lactamica 020-06]
gi|416180182|ref|ZP_11611367.1| ribosomal protein S2 [Neisseria meningitidis M6190]
gi|416193732|ref|ZP_11617288.1| ribosomal protein S2 [Neisseria meningitidis ES14902]
gi|421863200|ref|ZP_16294900.1| 30S ribosomal protein S2 [Neisseria lactamica Y92-1009]
gi|433493540|ref|ZP_20450621.1| ribosomal protein S2 [Neisseria meningitidis NM586]
gi|433495593|ref|ZP_20452650.1| ribosomal protein S2 [Neisseria meningitidis NM762]
gi|433497662|ref|ZP_20454687.1| ribosomal protein S2 [Neisseria meningitidis M7089]
gi|433499707|ref|ZP_20456708.1| ribosomal protein S2 [Neisseria meningitidis M7124]
gi|433501776|ref|ZP_20458755.1| ribosomal protein S2 [Neisseria meningitidis NM174]
gi|433503923|ref|ZP_20460874.1| ribosomal protein S2 [Neisseria meningitidis NM126]
gi|433537708|ref|ZP_20494199.1| ribosomal protein S2 [Neisseria meningitidis 77221]
gi|166225287|sp|A1KWH6.1|RS2_NEIMF RecName: Full=30S ribosomal protein S2
gi|120867461|emb|CAM11233.1| 30S ribosomal protein S2 [Neisseria meningitidis FAM18]
gi|309379322|emb|CBX22095.1| 30S ribosomal protein S2 [Neisseria lactamica Y92-1009]
gi|313005032|emb|CBN86464.1| 30S ribosomal protein S2 [Neisseria lactamica 020-06]
gi|325131341|gb|EGC54052.1| ribosomal protein S2 [Neisseria meningitidis M6190]
gi|325137370|gb|EGC59958.1| ribosomal protein S2 [Neisseria meningitidis ES14902]
gi|432225600|gb|ELK81341.1| ribosomal protein S2 [Neisseria meningitidis NM586]
gi|432226979|gb|ELK82694.1| ribosomal protein S2 [Neisseria meningitidis NM762]
gi|432231601|gb|ELK87260.1| ribosomal protein S2 [Neisseria meningitidis M7089]
gi|432232390|gb|ELK88035.1| ribosomal protein S2 [Neisseria meningitidis M7124]
gi|432232777|gb|ELK88413.1| ribosomal protein S2 [Neisseria meningitidis NM174]
gi|432238197|gb|ELK93773.1| ribosomal protein S2 [Neisseria meningitidis NM126]
gi|432270457|gb|ELL25595.1| ribosomal protein S2 [Neisseria meningitidis 77221]
Length = 242
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|452878640|ref|ZP_21955834.1| uridylate kinase [Pseudomonas aeruginosa VRFPA01]
gi|452184713|gb|EME11731.1| uridylate kinase [Pseudomonas aeruginosa VRFPA01]
Length = 366
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 226/339 (66%), Gaps = 2/339 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM + + I+ ++ + EI ++V G+++ +VIGGGN+ RG + +DR T D
Sbjct: 3 GEALMGSEEFGIDPKVLDRMALEIGQLVGIGVQVGLVIGGGNLFRGAALSAAGMDRVTGD 62
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT++N LA+ D L +S I + VMSAIS+ + Y A+++L G+VVIF+ G
Sbjct: 63 HMGMLATVMNGLAMRDALERSNIPALVMSAISMVGVTDHYDRRKAMRHLNGGEVVIFSAG 122
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ A LRA EI A+++LKATKVDG+Y +DP K +A ++++T+DEV+ +KL
Sbjct: 123 TGNPFFTTDSAACLRAIEIDADVVLKATKVDGVYTADPFKDPNAEKFERLTYDEVLDRKL 182
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDIKKNTKQK 839
+MD TA CRDQ +P+RVF++ K GAL ++ G EG + +I++IKK +++
Sbjct: 183 GVMDLTAICLCRDQNMPLRVFNMNKPGALLNIVVGGAEGP--DRGGLRMINEIKKEAQER 240
Query: 840 MLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFEK 899
M T++ L K+RTGRA+ +LD++ V Y+ T L ++AN+T+ +S T+++ F+K
Sbjct: 241 MGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLALAVFDK 300
Query: 900 EMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERRE 938
M ++KAI ++LGLNP G I V +P LT+E R+
Sbjct: 301 SMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRK 339
>gi|253999120|ref|YP_003051183.1| 30S ribosomal protein S2 [Methylovorus glucosetrophus SIP3-4]
gi|253985799|gb|ACT50656.1| ribosomal protein S2 [Methylovorus glucosetrophus SIP3-4]
Length = 249
Score = 297 bits (760), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 131/219 (59%), Positives = 175/219 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RNKIHI+NLEKTL ++E A++Y+ QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RA +++ RWLGG+LTNFKT+K SI+RL + + + +GS+
Sbjct: 67 LFVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQDGSLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K KKEAL + R+ KL R IGGIK M +PDAIFI+DVG+ GAV+EA KL IP+IGVV
Sbjct: 127 KFGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN+SPDG+ YVIPGNDDS+++I LY +GI DA L+ ++
Sbjct: 187 DTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRS 225
>gi|329118538|ref|ZP_08247242.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200]
gi|327465273|gb|EGF11554.1| 30S ribosomal protein S2 [Neisseria bacilliformis ATCC BAA-1200]
Length = 287
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 173/227 (76%), Gaps = 1/227 (0%)
Query: 166 YMESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIY 225
+M +T ++++AGVHFGHQTRFWNPKM+ YIFG RNKIHIINLEKTL ++++A +
Sbjct: 39 FMSQIT-MRQMLEAGVHFGHQTRFWNPKMAPYIFGARNKIHIINLEKTLPLFQEAQEAVR 97
Query: 226 QLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD 285
+L +KGT+LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E
Sbjct: 98 RLVAAKGTVLFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKS 157
Query: 286 LFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIK 345
+ N SKKE L R+ KL R +GGIKNM +PDAIF+ID GY KG + EA K
Sbjct: 158 AVLANADTSGYSKKELLDLTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEK 217
Query: 346 LNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
L IP+I VVDTN+SPDG+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 218 LGIPVIAVVDTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 264
>gi|421564198|ref|ZP_16010006.1| ribosomal protein S2 [Neisseria meningitidis NM2795]
gi|421907806|ref|ZP_16337675.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha704]
gi|433508092|ref|ZP_20464986.1| ribosomal protein S2 [Neisseria meningitidis 9757]
gi|393291121|emb|CCI73682.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha704]
gi|402338998|gb|EJU74221.1| ribosomal protein S2 [Neisseria meningitidis NM2795]
gi|432238674|gb|ELK94239.1| ribosomal protein S2 [Neisseria meningitidis 9757]
Length = 242
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/224 (61%), Positives = 171/224 (76%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
SL ++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L
Sbjct: 2 SLITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLV 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+KGT+LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E +
Sbjct: 62 ANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTTAL 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
N + +KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL I
Sbjct: 122 ENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
P+I VVDTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 182 PVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|374368290|ref|ZP_09626342.1| stringent starvation protein A [Cupriavidus basilensis OR16]
gi|373100171|gb|EHP41240.1| stringent starvation protein A [Cupriavidus basilensis OR16]
Length = 203
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+Y LENE+ K + K ++RAR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVYALENEKGKAAEKNHERARSAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|152981052|ref|YP_001353746.1| uridylate kinase [Janthinobacterium sp. Marseille]
gi|172049090|sp|A6SZP9.1|PYRH_JANMA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|151281129|gb|ABR89539.1| uridylate kinase [Janthinobacterium sp. Marseille]
Length = 238
Score = 296 bits (759), Expect = 3e-77, Method: Composition-based stats.
Identities = 140/223 (62%), Positives = 180/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN + I+ +++++SE+ G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDPYGINRATIERMVADVSEVAKLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + GI + VMSAI+IE+ +E Y+ A++YLEEGK+VIFA G
Sbjct: 75 YMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKALQYLEEGKIVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y++DPNK A Y ITFDE ISK L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYSADPNKDPDATRYATITFDEAISKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVH 237
>gi|304388735|ref|ZP_07370793.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091]
gi|254671030|emb|CBA07848.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha153]
gi|304337299|gb|EFM03475.1| 30S ribosomal protein S2 [Neisseria meningitidis ATCC 13091]
Length = 253
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A I +L +KGT+
Sbjct: 19 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIRRLVANKGTV 78
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 79 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 138
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 139 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 198
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 199 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 236
>gi|329912034|ref|ZP_08275645.1| Uridylate kinase [Oxalobacteraceae bacterium IMCC9480]
gi|327545757|gb|EGF30891.1| Uridylate kinase [Oxalobacteraceae bacterium IMCC9480]
Length = 238
Score = 296 bits (758), Expect = 4e-77, Method: Composition-based stats.
Identities = 139/223 (62%), Positives = 182/223 (81%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++E+ + G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEVAALGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + ++GI + VMSAISIE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQAGITARVMSAISIEQVVEPYVRPKALQYLEEGKIVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y++DP K +A Y ITFDE ISK L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYSADPKKDPTATRYTTITFDEAISKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K GALKRVI G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSITKPGALKRVIMGEDEGTLVH 237
>gi|113869342|ref|YP_727831.1| stringent starvation protein A (glutathione S-transferase)
[Ralstonia eutropha H16]
gi|194290933|ref|YP_002006840.1| stringent starvation protein a, regulator of transcription
[Cupriavidus taiwanensis LMG 19424]
gi|339327426|ref|YP_004687119.1| stringent starvation protein A [Cupriavidus necator N-1]
gi|113528118|emb|CAJ94463.1| stringent starvation protein A (glutathione S-transferase)
[Ralstonia eutropha H16]
gi|193224768|emb|CAQ70779.1| stringent starvation protein A, regulator of transcription
[Cupriavidus taiwanensis LMG 19424]
gi|338167583|gb|AEI78638.1| stringent starvation protein A (glutathione S-transferase)
[Cupriavidus necator N-1]
Length = 203
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+Y LENE+ K + K ++RAR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVYTLENEKGKAAEKNHERARAAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|73542774|ref|YP_297294.1| glutathione S-transferase [Ralstonia eutropha JMP134]
gi|94312158|ref|YP_585368.1| stringent starvation protein A [Cupriavidus metallidurans CH34]
gi|430805838|ref|ZP_19432953.1| stringent starvation protein A [Cupriavidus sp. HMR-1]
gi|72120187|gb|AAZ62450.1| Glutathione S-transferase, N-terminal [Ralstonia eutropha JMP134]
gi|93356010|gb|ABF10099.1| stringent starvation protein A [Cupriavidus metallidurans CH34]
gi|429501997|gb|ELA00321.1| stringent starvation protein A [Cupriavidus sp. HMR-1]
Length = 203
Score = 296 bits (758), Expect = 4e-77, Method: Composition-based stats.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+Y+LENE+ K + K ++RAR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVYVLENEKGKAAEKNHERARAAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|385342873|ref|YP_005896744.1| 30S ribosomal protein S2 [Neisseria meningitidis M01-240149]
gi|385852179|ref|YP_005898694.1| 30S ribosomal protein S2 [Neisseria meningitidis M04-240196]
gi|385858063|ref|YP_005904575.1| 30S ribosomal protein S2 [Neisseria meningitidis NZ-05/33]
gi|416175078|ref|ZP_11609386.1| ribosomal protein S2 [Neisseria meningitidis OX99.30304]
gi|416185188|ref|ZP_11613362.1| ribosomal protein S2 [Neisseria meningitidis M13399]
gi|416189405|ref|ZP_11615318.1| ribosomal protein S2 [Neisseria meningitidis M0579]
gi|416215003|ref|ZP_11623214.1| ribosomal protein S2 [Neisseria meningitidis M01-240013]
gi|421555781|ref|ZP_16001706.1| ribosomal protein S2 [Neisseria meningitidis 98008]
gi|421562133|ref|ZP_16007969.1| ribosomal protein S2 [Neisseria meningitidis NM2657]
gi|325129310|gb|EGC52148.1| ribosomal protein S2 [Neisseria meningitidis OX99.30304]
gi|325133276|gb|EGC55942.1| ribosomal protein S2 [Neisseria meningitidis M13399]
gi|325135329|gb|EGC57950.1| ribosomal protein S2 [Neisseria meningitidis M0579]
gi|325143512|gb|EGC65833.1| ribosomal protein S2 [Neisseria meningitidis M01-240013]
gi|325203079|gb|ADY98533.1| ribosomal protein S2 [Neisseria meningitidis M01-240149]
gi|325207002|gb|ADZ02455.1| ribosomal protein S2 [Neisseria meningitidis M04-240196]
gi|325208952|gb|ADZ04404.1| ribosomal protein S2 [Neisseria meningitidis NZ-05/33]
gi|402328757|gb|EJU64123.1| ribosomal protein S2 [Neisseria meningitidis 98008]
gi|402335522|gb|EJU70787.1| ribosomal protein S2 [Neisseria meningitidis NM2657]
Length = 242
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A I +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAIRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|334130477|ref|ZP_08504274.1| 30S ribosomal subunit protein S2 [Methyloversatilis universalis
FAM5]
gi|333444586|gb|EGK72535.1| 30S ribosomal subunit protein S2 [Methyloversatilis universalis
FAM5]
Length = 250
Score = 296 bits (758), Expect = 4e-77, Method: Composition-based stats.
Identities = 133/231 (57%), Positives = 189/231 (81%), Gaps = 6/231 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKT+ Y +A+ ++ ++ +KGT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTVAKYNEAMTFLRRMSANKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+P++D+RWLGG+LTNFKT+K S++RLK+++ + +GS+
Sbjct: 67 LMVGTKRQAREIVAEEAQRAGVPYVDERWLGGMLTNFKTLKLSVKRLKDLEAMVEDGSME 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++ KKEAL+ R+ +KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL IP++ VV
Sbjct: 127 RMPKKEALVLQRELVKLQKSIGGIKDMAGLPDALFVIDVGYHKIAITEANKLGIPVVAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLD------AKTVGELRS 399
DTNHSP+G++YVIPGNDDS+++I LY G+ DA L+ A+ V +L+S
Sbjct: 187 DTNHSPNGVDYVIPGNDDSSRAIRLYASGVADAILEGRNSAAAELVAQLKS 237
>gi|385337179|ref|YP_005891052.1| 30S ribosomal protein S2 [Neisseria meningitidis WUE 2594]
gi|254667632|emb|CBA03428.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha14]
gi|319409593|emb|CBY89890.1| 30S ribosomal protein S2 [Neisseria meningitidis WUE 2594]
gi|389606861|emb|CCA45772.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha522]
Length = 253
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A + +L +KGT+
Sbjct: 19 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTV 78
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 79 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 138
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 139 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 198
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 199 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 236
>gi|313201221|ref|YP_004039879.1| 30S ribosomal protein S2 [Methylovorus sp. MP688]
gi|312440537|gb|ADQ84643.1| ribosomal protein S2 [Methylovorus sp. MP688]
Length = 242
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 174/218 (79%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ +IFG RNKIHI+NLEKTL ++E A++Y+ QL +KG +L
Sbjct: 1 MLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAANKGRIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKRQAR ++ EA RA +++ RWLGG+LTNFKT+K SI+RL + + + +GS+ K
Sbjct: 61 FVGTKRQARDIMKEEAERANCAYVNHRWLGGMLTNFKTVKQSIKRLNDYETMLQDGSLDK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
KKEAL + R+ KL R IGGIK M +PDAIFI+DVG+ GAV+EA KL IP+IGVVD
Sbjct: 121 FGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGIPVIGVVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN+SPDG+ YVIPGNDDS+++I LY +GI DA L+ ++
Sbjct: 181 TNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGRS 218
>gi|386332245|ref|YP_006028414.1| stringent starvation protein a [Ralstonia solanacearum Po82]
gi|334194693|gb|AEG67878.1| stringent starvation protein a [Ralstonia solanacearum Po82]
Length = 226
Score = 296 bits (757), Expect = 5e-77, Method: Composition-based stats.
Identities = 134/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 48 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 107
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+ +LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 108 VQRARARLFLFNFEKELFTHVAVLENEKGKAAEKSHEKARAAIRDRLTQLAPIFLKNKYM 167
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 168 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 225
>gi|15677921|ref|NP_275089.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58]
gi|218767332|ref|YP_002341844.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491]
gi|385325036|ref|YP_005879475.1| 30S ribosomal protein S2 [Neisseria meningitidis 8013]
gi|385340945|ref|YP_005894817.1| 30S ribosomal protein S2 [Neisseria meningitidis G2136]
gi|385856108|ref|YP_005902621.1| 30S ribosomal protein S2 [Neisseria meningitidis M01-240355]
gi|394895411|ref|YP_003082311.2| 30S ribosomal protein S2 [Neisseria meningitidis alpha14]
gi|416165401|ref|ZP_11607437.1| ribosomal protein S2 [Neisseria meningitidis N1568]
gi|416198698|ref|ZP_11619065.1| ribosomal protein S2 [Neisseria meningitidis CU385]
gi|416209157|ref|ZP_11621237.1| ribosomal protein S2 [Neisseria meningitidis 961-5945]
gi|421539072|ref|ZP_15985243.1| ribosomal protein S2 [Neisseria meningitidis 93003]
gi|421541365|ref|ZP_15987491.1| ribosomal protein S2 [Neisseria meningitidis 93004]
gi|421545426|ref|ZP_15991489.1| ribosomal protein S2 [Neisseria meningitidis NM140]
gi|421547475|ref|ZP_15993510.1| ribosomal protein S2 [Neisseria meningitidis NM183]
gi|421549508|ref|ZP_15995521.1| ribosomal protein S2 [Neisseria meningitidis NM2781]
gi|421553660|ref|ZP_15999619.1| ribosomal protein S2 [Neisseria meningitidis NM576]
gi|421556562|ref|ZP_16002477.1| ribosomal protein S2 [Neisseria meningitidis 80179]
gi|421560017|ref|ZP_16005882.1| ribosomal protein S2 [Neisseria meningitidis 92045]
gi|421567936|ref|ZP_16013667.1| ribosomal protein S2 [Neisseria meningitidis NM3001]
gi|427828210|ref|ZP_18995228.1| ribosomal protein S2 [Neisseria meningitidis H44/76]
gi|433466082|ref|ZP_20423550.1| ribosomal protein S2 [Neisseria meningitidis NM422]
gi|433468097|ref|ZP_20425544.1| ribosomal protein S2 [Neisseria meningitidis 87255]
gi|433470246|ref|ZP_20427651.1| ribosomal protein S2 [Neisseria meningitidis 98080]
gi|433474430|ref|ZP_20431782.1| ribosomal protein S2 [Neisseria meningitidis 97021]
gi|433476531|ref|ZP_20433862.1| ribosomal protein S2 [Neisseria meningitidis 88050]
gi|433480495|ref|ZP_20437776.1| ribosomal protein S2 [Neisseria meningitidis 63041]
gi|433482860|ref|ZP_20440110.1| ribosomal protein S2 [Neisseria meningitidis 2006087]
gi|433484874|ref|ZP_20442088.1| ribosomal protein S2 [Neisseria meningitidis 2002038]
gi|433487105|ref|ZP_20444292.1| ribosomal protein S2 [Neisseria meningitidis 97014]
gi|433489276|ref|ZP_20446422.1| ribosomal protein S2 [Neisseria meningitidis M13255]
gi|433491457|ref|ZP_20448566.1| ribosomal protein S2 [Neisseria meningitidis NM418]
gi|433505974|ref|ZP_20462902.1| ribosomal protein S2 [Neisseria meningitidis 9506]
gi|433510269|ref|ZP_20467123.1| ribosomal protein S2 [Neisseria meningitidis 12888]
gi|433512305|ref|ZP_20469113.1| ribosomal protein S2 [Neisseria meningitidis 4119]
gi|433514422|ref|ZP_20471204.1| ribosomal protein S2 [Neisseria meningitidis 63049]
gi|433516625|ref|ZP_20473383.1| ribosomal protein S2 [Neisseria meningitidis 2004090]
gi|433518732|ref|ZP_20475466.1| ribosomal protein S2 [Neisseria meningitidis 96023]
gi|433520784|ref|ZP_20477492.1| ribosomal protein S2 [Neisseria meningitidis 65014]
gi|433522800|ref|ZP_20479479.1| ribosomal protein S2 [Neisseria meningitidis 61103]
gi|433524958|ref|ZP_20481610.1| ribosomal protein S2 [Neisseria meningitidis 97020]
gi|433529206|ref|ZP_20485811.1| ribosomal protein S2 [Neisseria meningitidis NM3652]
gi|433531381|ref|ZP_20487958.1| ribosomal protein S2 [Neisseria meningitidis NM3642]
gi|433533415|ref|ZP_20489971.1| ribosomal protein S2 [Neisseria meningitidis 2007056]
gi|433535470|ref|ZP_20491995.1| ribosomal protein S2 [Neisseria meningitidis 2001212]
gi|433541975|ref|ZP_20498413.1| ribosomal protein S2 [Neisseria meningitidis 63006]
gi|54039453|sp|P66540.1|RS2_NEIMB RecName: Full=30S ribosomal protein S2
gi|54041954|sp|P66539.1|RS2_NEIMA RecName: Full=30S ribosomal protein S2
gi|7227364|gb|AAF42418.1| 30S ribosomal protein S2 [Neisseria meningitidis MC58]
gi|121051340|emb|CAM07630.1| 30S ribosomal protein S2 [Neisseria meningitidis Z2491]
gi|261393423|emb|CAX51060.1| 30S ribosomal protein S2 [Neisseria meningitidis 8013]
gi|316983993|gb|EFV62972.1| ribosomal protein S2 [Neisseria meningitidis H44/76]
gi|325127290|gb|EGC50226.1| ribosomal protein S2 [Neisseria meningitidis N1568]
gi|325139420|gb|EGC61960.1| ribosomal protein S2 [Neisseria meningitidis CU385]
gi|325141374|gb|EGC63857.1| ribosomal protein S2 [Neisseria meningitidis 961-5945]
gi|325199189|gb|ADY94645.1| ribosomal protein S2 [Neisseria meningitidis G2136]
gi|325205049|gb|ADZ00503.1| ribosomal protein S2 [Neisseria meningitidis M01-240355]
gi|402314888|gb|EJU50456.1| ribosomal protein S2 [Neisseria meningitidis 93004]
gi|402315184|gb|EJU50750.1| ribosomal protein S2 [Neisseria meningitidis 93003]
gi|402320785|gb|EJU56266.1| ribosomal protein S2 [Neisseria meningitidis NM183]
gi|402320973|gb|EJU56453.1| ribosomal protein S2 [Neisseria meningitidis NM140]
gi|402323215|gb|EJU58661.1| ribosomal protein S2 [Neisseria meningitidis NM2781]
gi|402327480|gb|EJU62868.1| ribosomal protein S2 [Neisseria meningitidis NM576]
gi|402334102|gb|EJU69396.1| ribosomal protein S2 [Neisseria meningitidis 92045]
gi|402337235|gb|EJU72485.1| ribosomal protein S2 [Neisseria meningitidis 80179]
gi|402342881|gb|EJU78037.1| ribosomal protein S2 [Neisseria meningitidis NM3001]
gi|432200284|gb|ELK56381.1| ribosomal protein S2 [Neisseria meningitidis NM422]
gi|432200780|gb|ELK56869.1| ribosomal protein S2 [Neisseria meningitidis 98080]
gi|432201008|gb|ELK57095.1| ribosomal protein S2 [Neisseria meningitidis 87255]
gi|432207086|gb|ELK63081.1| ribosomal protein S2 [Neisseria meningitidis 97021]
gi|432207389|gb|ELK63379.1| ribosomal protein S2 [Neisseria meningitidis 88050]
gi|432213698|gb|ELK69609.1| ribosomal protein S2 [Neisseria meningitidis 2006087]
gi|432213772|gb|ELK69682.1| ribosomal protein S2 [Neisseria meningitidis 63041]
gi|432219111|gb|ELK74959.1| ribosomal protein S2 [Neisseria meningitidis 2002038]
gi|432220090|gb|ELK75917.1| ribosomal protein S2 [Neisseria meningitidis 97014]
gi|432220206|gb|ELK76031.1| ribosomal protein S2 [Neisseria meningitidis M13255]
gi|432225209|gb|ELK80962.1| ribosomal protein S2 [Neisseria meningitidis NM418]
gi|432238498|gb|ELK94064.1| ribosomal protein S2 [Neisseria meningitidis 9506]
gi|432244513|gb|ELL00002.1| ribosomal protein S2 [Neisseria meningitidis 12888]
gi|432244666|gb|ELL00151.1| ribosomal protein S2 [Neisseria meningitidis 4119]
gi|432245384|gb|ELL00854.1| ribosomal protein S2 [Neisseria meningitidis 63049]
gi|432250811|gb|ELL06191.1| ribosomal protein S2 [Neisseria meningitidis 2004090]
gi|432250893|gb|ELL06270.1| ribosomal protein S2 [Neisseria meningitidis 96023]
gi|432251400|gb|ELL06769.1| ribosomal protein S2 [Neisseria meningitidis 65014]
gi|432257315|gb|ELL12618.1| ribosomal protein S2 [Neisseria meningitidis 61103]
gi|432257460|gb|ELL12760.1| ribosomal protein S2 [Neisseria meningitidis 97020]
gi|432263560|gb|ELL18777.1| ribosomal protein S2 [Neisseria meningitidis NM3652]
gi|432263831|gb|ELL19042.1| ribosomal protein S2 [Neisseria meningitidis NM3642]
gi|432264729|gb|ELL19928.1| ribosomal protein S2 [Neisseria meningitidis 2007056]
gi|432269060|gb|ELL24223.1| ribosomal protein S2 [Neisseria meningitidis 2001212]
gi|432275046|gb|ELL30124.1| ribosomal protein S2 [Neisseria meningitidis 63006]
Length = 242
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|319779546|ref|YP_004130459.1| uridylate kinase [Taylorella equigenitalis MCE9]
gi|397661777|ref|YP_006502477.1| uridylate kinase [Taylorella equigenitalis ATCC 35865]
gi|317109570|gb|ADU92316.1| Uridylate kinase [Taylorella equigenitalis MCE9]
gi|394349956|gb|AFN35870.1| uridylate kinase [Taylorella equigenitalis ATCC 35865]
gi|399115142|emb|CCG17941.1| uridylate kinase [Taylorella equigenitalis 14/56]
Length = 237
Score = 296 bits (757), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/223 (64%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN S I + EI+E+ G+ELAIVIGGGNI RGI+ Q +DR+TAD
Sbjct: 14 GEALMGEDSFGINRSTISRMAEEIAEVSKLGVELAIVIGGGNIFRGIAPGAQGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D L G++S V SA++IE+ +E YI A++YLEE KVVIFA G
Sbjct: 74 YMGMLATVMNALALQDALKTYGVVSRVQSALNIEQVVEPYIRPKALRYLEEKKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDGIY +DPNK SA Y ITFDE ++K+L
Sbjct: 134 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYTADPNKDPSASRYSNITFDEALTKRL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
EIMD+TAF+ CRDQKLPI+VFSI K+GAL+RV+ G++EGTLV+
Sbjct: 194 EIMDATAFALCRDQKLPIKVFSINKTGALQRVVLGEDEGTLVH 236
>gi|172044198|sp|A4G4S3.2|PYRH_HERAR RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
Length = 238
Score = 295 bits (756), Expect = 7e-77, Method: Composition-based stats.
Identities = 139/223 (62%), Positives = 180/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN + I+ +++++SE+ G+ELAIVIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGDDPYGINRATIERMVADVSEVSRLGVELAIVIGGGNIFRGVAPGAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + GI + VMSAI+IE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKALQYLEEGKIVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y++DPNK A Y ITFDE ISK L
Sbjct: 135 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPNKDPDATRYSTITFDEAISKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVH 237
>gi|167564312|ref|ZP_02357228.1| stringent starvation protein A [Burkholderia oklahomensis EO147]
gi|167571461|ref|ZP_02364335.1| stringent starvation protein A [Burkholderia oklahomensis C6786]
Length = 203
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 162/178 (91%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKSHEKARLAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIDLSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|413959474|ref|ZP_11398710.1| stringent starvation protein A, SspA [Burkholderia sp. SJ98]
gi|413940431|gb|EKS72394.1| stringent starvation protein A, SspA [Burkholderia sp. SJ98]
Length = 203
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVGTLENEKGKAAEKNHEKARSAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|264679367|ref|YP_003279274.1| 30S ribosomal protein S2 [Comamonas testosteroni CNB-2]
gi|299532326|ref|ZP_07045719.1| 30S ribosomal protein S2 [Comamonas testosteroni S44]
gi|262209880|gb|ACY33978.1| ribosomal protein S2 [Comamonas testosteroni CNB-2]
gi|298719734|gb|EFI60698.1| 30S ribosomal protein S2 [Comamonas testosteroni S44]
Length = 250
Score = 295 bits (755), Expect = 9e-77, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFG RNKIHIINLEK+L M+++A ++ QL + GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTANGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK A++EA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+PDGI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 186 DTNHNPDGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>gi|254300671|ref|ZP_04968116.1| stringent starvation protein A [Burkholderia pseudomallei 406e]
gi|403520369|ref|YP_006654503.1| stringent starvation protein A [Burkholderia pseudomallei BPC006]
gi|424907120|ref|ZP_18330611.1| stringent starvation protein A [Burkholderia thailandensis MSMB43]
gi|157810615|gb|EDO87785.1| stringent starvation protein A [Burkholderia pseudomallei 406e]
gi|390927477|gb|EIP84886.1| stringent starvation protein A [Burkholderia thailandensis MSMB43]
gi|403076011|gb|AFR17591.1| stringent starvation protein A [Burkholderia pseudomallei BPC006]
Length = 185
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 7 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 66
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 67 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKSHEKARLAIRDRLTQLAPIFLKNKYM 126
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 127 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 184
>gi|53720727|ref|YP_109713.1| stringent starvation protein A [Burkholderia pseudomallei K96243]
gi|53724247|ref|YP_104216.1| stringent starvation protein A [Burkholderia mallei ATCC 23344]
gi|76809697|ref|YP_335036.1| stringent starvation protein A [Burkholderia pseudomallei 1710b]
gi|83721108|ref|YP_443478.1| stringent starvation protein A [Burkholderia thailandensis E264]
gi|121601047|ref|YP_994542.1| stringent starvation protein A [Burkholderia mallei SAVP1]
gi|124383627|ref|YP_001027787.1| stringent starvation protein A [Burkholderia mallei NCTC 10229]
gi|126438471|ref|YP_001060651.1| stringent starvation protein A [Burkholderia pseudomallei 668]
gi|126450848|ref|YP_001082266.1| stringent starvation protein A [Burkholderia mallei NCTC 10247]
gi|126452854|ref|YP_001067934.1| stringent starvation protein A [Burkholderia pseudomallei 1106a]
gi|134283297|ref|ZP_01769998.1| stringent starvation protein A [Burkholderia pseudomallei 305]
gi|167001613|ref|ZP_02267407.1| stringent starvation protein A [Burkholderia mallei PRL-20]
gi|167582521|ref|ZP_02375395.1| stringent starvation protein A [Burkholderia thailandensis TXDOH]
gi|167620636|ref|ZP_02389267.1| stringent starvation protein A [Burkholderia thailandensis Bt4]
gi|167721467|ref|ZP_02404703.1| stringent starvation protein A [Burkholderia pseudomallei DM98]
gi|167740438|ref|ZP_02413212.1| stringent starvation protein A [Burkholderia pseudomallei 14]
gi|167817650|ref|ZP_02449330.1| stringent starvation protein A [Burkholderia pseudomallei 91]
gi|167829989|ref|ZP_02461460.1| stringent starvation protein A [Burkholderia pseudomallei 9]
gi|167838107|ref|ZP_02464966.1| stringent starvation protein A [Burkholderia thailandensis MSMB43]
gi|167847554|ref|ZP_02473062.1| stringent starvation protein A [Burkholderia pseudomallei B7210]
gi|167896131|ref|ZP_02483533.1| stringent starvation protein A [Burkholderia pseudomallei 7894]
gi|167904515|ref|ZP_02491720.1| stringent starvation protein A [Burkholderia pseudomallei NCTC
13177]
gi|167912777|ref|ZP_02499868.1| stringent starvation protein A [Burkholderia pseudomallei 112]
gi|167920737|ref|ZP_02507828.1| stringent starvation protein A [Burkholderia pseudomallei BCC215]
gi|217424844|ref|ZP_03456341.1| stringent starvation protein A [Burkholderia pseudomallei 576]
gi|226198154|ref|ZP_03793725.1| stringent starvation protein A [Burkholderia pseudomallei Pakistan
9]
gi|237814046|ref|YP_002898497.1| stringent starvation protein A [Burkholderia pseudomallei MSHR346]
gi|238562492|ref|ZP_00440351.2| stringent starvation protein A [Burkholderia mallei GB8 horse 4]
gi|242315377|ref|ZP_04814393.1| stringent starvation protein A [Burkholderia pseudomallei 1106b]
gi|254174666|ref|ZP_04881327.1| stringent starvation protein A [Burkholderia mallei ATCC 10399]
gi|254180435|ref|ZP_04887033.1| stringent starvation protein A [Burkholderia pseudomallei 1655]
gi|254190399|ref|ZP_04896907.1| stringent starvation protein A [Burkholderia pseudomallei Pasteur
52237]
gi|254198501|ref|ZP_04904922.1| stringent starvation protein A [Burkholderia pseudomallei S13]
gi|254201290|ref|ZP_04907654.1| stringent starvation protein A [Burkholderia mallei FMH]
gi|254206632|ref|ZP_04912983.1| stringent starvation protein A [Burkholderia mallei JHU]
gi|254258752|ref|ZP_04949806.1| stringent starvation protein A [Burkholderia pseudomallei 1710a]
gi|254357257|ref|ZP_04973531.1| stringent starvation protein A [Burkholderia mallei 2002721280]
gi|257137737|ref|ZP_05585999.1| stringent starvation protein A [Burkholderia thailandensis E264]
gi|386863377|ref|YP_006276326.1| stringent starvation protein A [Burkholderia pseudomallei 1026b]
gi|418398449|ref|ZP_12972013.1| stringent starvation protein A [Burkholderia pseudomallei 354a]
gi|418539194|ref|ZP_13104790.1| stringent starvation protein A [Burkholderia pseudomallei 1026a]
gi|418545581|ref|ZP_13110833.1| stringent starvation protein A [Burkholderia pseudomallei 1258a]
gi|418545775|ref|ZP_13111017.1| stringent starvation protein A [Burkholderia pseudomallei 1258b]
gi|418554532|ref|ZP_13119313.1| stringent starvation protein A [Burkholderia pseudomallei 354e]
gi|52211141|emb|CAH37130.1| putative stringent starvation protein A [Burkholderia pseudomallei
K96243]
gi|52427670|gb|AAU48263.1| stringent starvation protein A [Burkholderia mallei ATCC 23344]
gi|76579150|gb|ABA48625.1| stringent starvation protein A [Burkholderia pseudomallei 1710b]
gi|83654933|gb|ABC38996.1| stringent starvation protein A [Burkholderia thailandensis E264]
gi|121229857|gb|ABM52375.1| stringent starvation protein A [Burkholderia mallei SAVP1]
gi|124291647|gb|ABN00916.1| stringent starvation protein A [Burkholderia mallei NCTC 10229]
gi|126217964|gb|ABN81470.1| stringent starvation protein A [Burkholderia pseudomallei 668]
gi|126226496|gb|ABN90036.1| stringent starvation protein A [Burkholderia pseudomallei 1106a]
gi|126243718|gb|ABO06811.1| stringent starvation protein A [Burkholderia mallei NCTC 10247]
gi|134245492|gb|EBA45585.1| stringent starvation protein A [Burkholderia pseudomallei 305]
gi|147747184|gb|EDK54260.1| stringent starvation protein A [Burkholderia mallei FMH]
gi|147752174|gb|EDK59240.1| stringent starvation protein A [Burkholderia mallei JHU]
gi|148026321|gb|EDK84406.1| stringent starvation protein A [Burkholderia mallei 2002721280]
gi|157938075|gb|EDO93745.1| stringent starvation protein A [Burkholderia pseudomallei Pasteur
52237]
gi|160695711|gb|EDP85681.1| stringent starvation protein A [Burkholderia mallei ATCC 10399]
gi|169655241|gb|EDS87934.1| stringent starvation protein A [Burkholderia pseudomallei S13]
gi|184210974|gb|EDU08017.1| stringent starvation protein A [Burkholderia pseudomallei 1655]
gi|217392300|gb|EEC32325.1| stringent starvation protein A [Burkholderia pseudomallei 576]
gi|225929674|gb|EEH25690.1| stringent starvation protein A [Burkholderia pseudomallei Pakistan
9]
gi|237503608|gb|ACQ95926.1| stringent starvation protein A [Burkholderia pseudomallei MSHR346]
gi|238522528|gb|EEP85972.1| stringent starvation protein A [Burkholderia mallei GB8 horse 4]
gi|242138616|gb|EES25018.1| stringent starvation protein A [Burkholderia pseudomallei 1106b]
gi|243062623|gb|EES44809.1| stringent starvation protein A [Burkholderia mallei PRL-20]
gi|254217441|gb|EET06825.1| stringent starvation protein A [Burkholderia pseudomallei 1710a]
gi|385345499|gb|EIF52197.1| stringent starvation protein A [Burkholderia pseudomallei 1258a]
gi|385345818|gb|EIF52511.1| stringent starvation protein A [Burkholderia pseudomallei 1026a]
gi|385365368|gb|EIF71052.1| stringent starvation protein A [Burkholderia pseudomallei 354a]
gi|385366130|gb|EIF71767.1| stringent starvation protein A [Burkholderia pseudomallei 1258b]
gi|385370110|gb|EIF75380.1| stringent starvation protein A [Burkholderia pseudomallei 354e]
gi|385660505|gb|AFI67928.1| stringent starvation protein A [Burkholderia pseudomallei 1026b]
Length = 203
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKSHEKARLAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|134094562|ref|YP_001099637.1| uridylate kinase [Herminiimonas arsenicoxydans]
gi|133738465|emb|CAL61510.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
[Herminiimonas arsenicoxydans]
Length = 264
Score = 295 bits (754), Expect = 1e-76, Method: Composition-based stats.
Identities = 139/223 (62%), Positives = 180/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN + I+ +++++SE+ G+ELAIVIGGGNI RG++ + +DR+TAD
Sbjct: 41 GEALMGDDPYGINRATIERMVADVSEVSRLGVELAIVIGGGNIFRGVAPGAEGMDRATAD 100
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + GI + VMSAI+IE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 101 YMGMLATVMNSLALADAMRQVGITARVMSAIAIEQVVEPYVRPKALQYLEEGKIVVFAAG 160
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y++DPNK A Y ITFDE ISK L
Sbjct: 161 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPNKDPDATRYSTITFDEAISKHL 220
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 221 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVH 263
>gi|30249680|ref|NP_841750.1| 30S ribosomal protein S2 [Nitrosomonas europaea ATCC 19718]
gi|61215747|sp|Q82TZ6.1|RS2_NITEU RecName: Full=30S ribosomal protein S2
gi|30180717|emb|CAD85629.1| Ribosomal protein S2 [Nitrosomonas europaea ATCC 19718]
Length = 251
Score = 295 bits (754), Expect = 1e-76, Method: Composition-based stats.
Identities = 135/237 (56%), Positives = 185/237 (78%), Gaps = 6/237 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE TL M +A+ Y +L +KGT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMLREALDYARRLTANKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G P+++QRWLGG+LTNFKTI+ SI+RL++M+ + +G++
Sbjct: 67 LFVGTKRQARDIVMEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDGTLN 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL F R+ KLN +GGIK M +PDA+F+IDVGY KGA+ EA KL IP++GVV
Sbjct: 127 KLTKKEALDFQRELEKLNNSLGGIKEMKGLPDAMFVIDVGYQKGAIVEADKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
DTNHSP G+ YV+PGNDDS+++I LY + + DA L+ R++++ I+E K+
Sbjct: 187 DTNHSPAGVRYVVPGNDDSSQAIRLYARAMADAILEG------RNQSVQEIIEMSKS 237
>gi|297538503|ref|YP_003674272.1| 30S ribosomal protein S2 [Methylotenera versatilis 301]
gi|297257850|gb|ADI29695.1| ribosomal protein S2 [Methylotenera versatilis 301]
Length = 248
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 174/217 (80%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ +IFG RNKIHI+NLEKTL M+E A++++ L +KG +L
Sbjct: 8 MLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPMFEDALKHVRTLAANKGRIL 67
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKRQAR ++ EA RAG +++ RWLGG+LTNFKT+K SI+RL + ++ + +GS+ K
Sbjct: 68 FVGTKRQARDIVKEEASRAGCAYVNHRWLGGMLTNFKTVKQSIKRLHDFEVMLEDGSLEK 127
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GA++EA KL IP+IG+VD
Sbjct: 128 FGKKEALGYKREIEKLERSIGGIKEMGGLPDAIFIIDVGHESGAITEAAKLGIPVIGIVD 187
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN+SPDG+ +VIPGNDDS+++I LY +GI DA L+ +
Sbjct: 188 TNNSPDGVAFVIPGNDDSSRAIRLYARGIADAVLEGR 224
>gi|118594913|ref|ZP_01552260.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181]
gi|118440691|gb|EAV47318.1| 30S ribosomal protein S2 [Methylophilales bacterium HTCC2181]
Length = 254
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 172/218 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHI+NLEKTL M+E+A++Y L +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPYIFGDRNKIHIVNLEKTLPMFEEALKYSKTLAANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+RAG +++ RWLGG+LTNFKT+K SI+RL E++ +GS+
Sbjct: 67 LFVGTKRQARDILKEEALRAGCAYVNHRWLGGMLTNFKTVKQSIKRLVELETMFEDGSLE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKEAL R KL R IGGIKNM +PDAIF++DVG+ GAV EA KL IPIIGVV
Sbjct: 127 KITKKEALNLKRDYDKLERSIGGIKNMTALPDAIFVVDVGFESGAVVEATKLGIPIIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+S D I YVIPGNDDS+++I LY +G+ D L+ K
Sbjct: 187 DTNNSTDNIAYVIPGNDDSSRAIRLYARGMADTILEGK 224
>gi|340786523|ref|YP_004751988.1| uridylate kinase [Collimonas fungivorans Ter331]
gi|340551790|gb|AEK61165.1| Uridylate kinase [Collimonas fungivorans Ter331]
Length = 238
Score = 294 bits (753), Expect = 1e-76, Method: Composition-based stats.
Identities = 141/223 (63%), Positives = 181/223 (81%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++E+ G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEVAKLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + GI + VMSAISIE+ +E Y+ A++YLEE K+VIFA G
Sbjct: 75 YMGMLATVMNSLALADAMRQVGITARVMSAISIEQVVEPYVRPKALQYLEEDKIVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y++DPNK +A Y ITFDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYSADPNKDPTATRYSHITFDEAITKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSIIK GALKRVI G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIIKPGALKRVILGEDEGTLVH 237
>gi|377821798|ref|YP_004978169.1| stringent starvation protein A, SspA [Burkholderia sp. YI23]
gi|357936633|gb|AET90192.1| stringent starvation protein A, SspA [Burkholderia sp. YI23]
Length = 203
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVGTLENEKGKAAEKNHEKARGAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|348590217|ref|YP_004874679.1| uridylate kinase [Taylorella asinigenitalis MCE3]
gi|347974121|gb|AEP36656.1| Uridylate kinase [Taylorella asinigenitalis MCE3]
gi|399116104|emb|CCG18908.1| uridylate kinase [Taylorella asinigenitalis 14/45]
Length = 237
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/223 (63%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN S I + EI+++ G+ELAIVIGGGNI RGI+ Q +DR+TAD
Sbjct: 14 GEALMGEDSFGINRSTISRMAEEIAQVTKLGVELAIVIGGGNIFRGIAPGAQGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D L G++S V SA++IE+ +E YI A++YLEE KVVIFA G
Sbjct: 74 YMGMLATVMNALALQDALKSFGVVSRVQSALNIEQVIEPYIRPKALRYLEEKKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI A+I+LKATKVDGIY +DP K SA Y ITFDE +SKKL
Sbjct: 134 TGNPFFTTDTAAALRGAEIGAQIVLKATKVDGIYTADPKKDSSATRYSSITFDEALSKKL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
EIMD+TAF+ CRDQKLPI+VFSI K GAL+RV+ G++EGTLV+
Sbjct: 194 EIMDATAFALCRDQKLPIKVFSINKPGALQRVVLGEDEGTLVH 236
>gi|402567822|ref|YP_006617167.1| glutathione S-transferase [Burkholderia cepacia GG4]
gi|402249019|gb|AFQ49473.1| glutathione S-transferase [Burkholderia cepacia GG4]
Length = 203
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKNHEKARLAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|398836103|ref|ZP_10593452.1| uridylate kinase [Herbaspirillum sp. YR522]
gi|398213934|gb|EJN00520.1| uridylate kinase [Herbaspirillum sp. YR522]
Length = 238
Score = 294 bits (753), Expect = 2e-76, Method: Composition-based stats.
Identities = 138/223 (61%), Positives = 181/223 (81%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++EI + GIELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEISNLGIELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + ++G+ + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y +DP K +A Y I+FDE ISK L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPTATRYSSISFDEAISKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVMGEDEGTLVH 237
>gi|399017264|ref|ZP_10719461.1| uridylate kinase [Herbaspirillum sp. CF444]
gi|398104035|gb|EJL94192.1| uridylate kinase [Herbaspirillum sp. CF444]
Length = 238
Score = 294 bits (753), Expect = 2e-76, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 180/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++E+ G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEVSQLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + ++G+ + VMSAI IE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKIVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y +DP K SA Y ITFDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPSATRYSTITFDEAIAKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVLGEDEGTLVH 237
>gi|299065510|emb|CBJ36679.1| stringent starvation protein A, regulator of transcription
[Ralstonia solanacearum CMR15]
Length = 179
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 1 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+ +LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 61 VQRARARLFLFNFEKELFTHVAVLENEKGKAAEKSHEKARAAIRDRLTQLAPIFLKNKYM 120
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 121 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 178
>gi|161870970|ref|YP_001600150.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442]
gi|189044946|sp|A9M489.1|RS2_NEIM0 RecName: Full=30S ribosomal protein S2
gi|161596523|gb|ABX74183.1| 30S ribosomal protein S2 [Neisseria meningitidis 053442]
Length = 242
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 167/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M++ A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + E KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVETEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|241759080|ref|ZP_04757191.1| ribosomal protein S2 [Neisseria flavescens SK114]
gi|261380648|ref|ZP_05985221.1| ribosomal protein S2 [Neisseria subflava NJ9703]
gi|297250618|ref|ZP_06864669.2| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768]
gi|418289268|ref|ZP_12901627.1| ribosomal protein S2 [Neisseria meningitidis NM233]
gi|418291523|ref|ZP_12903516.1| ribosomal protein S2 [Neisseria meningitidis NM220]
gi|421543354|ref|ZP_15989449.1| ribosomal protein S2 [Neisseria meningitidis NM255]
gi|421551620|ref|ZP_15997607.1| ribosomal protein S2 [Neisseria meningitidis 69166]
gi|433472390|ref|ZP_20429766.1| ribosomal protein S2 [Neisseria meningitidis 68094]
gi|433478655|ref|ZP_20435961.1| ribosomal protein S2 [Neisseria meningitidis 70012]
gi|433527139|ref|ZP_20483756.1| ribosomal protein S2 [Neisseria meningitidis 69096]
gi|433539862|ref|ZP_20496326.1| ribosomal protein S2 [Neisseria meningitidis 70030]
gi|241320682|gb|EER56935.1| ribosomal protein S2 [Neisseria flavescens SK114]
gi|284796629|gb|EFC51976.1| ribosomal protein S2 [Neisseria subflava NJ9703]
gi|296838458|gb|EFH22396.1| ribosomal protein S2 [Neisseria polysaccharea ATCC 43768]
gi|372199730|gb|EHP13928.1| ribosomal protein S2 [Neisseria meningitidis NM220]
gi|372199958|gb|EHP14106.1| ribosomal protein S2 [Neisseria meningitidis NM233]
gi|402315000|gb|EJU50567.1| ribosomal protein S2 [Neisseria meningitidis NM255]
gi|402326627|gb|EJU62026.1| ribosomal protein S2 [Neisseria meningitidis 69166]
gi|432206343|gb|ELK62352.1| ribosomal protein S2 [Neisseria meningitidis 68094]
gi|432212935|gb|ELK68866.1| ribosomal protein S2 [Neisseria meningitidis 70012]
gi|432257956|gb|ELL13248.1| ribosomal protein S2 [Neisseria meningitidis 69096]
gi|432270907|gb|ELL26040.1| ribosomal protein S2 [Neisseria meningitidis 70030]
Length = 242
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|288575409|ref|ZP_05976922.2| ribosomal protein S2 [Neisseria mucosa ATCC 25996]
gi|421566400|ref|ZP_16012150.1| ribosomal protein S2 [Neisseria meningitidis NM3081]
gi|288568071|gb|EFC89631.1| ribosomal protein S2 [Neisseria mucosa ATCC 25996]
gi|402340313|gb|EJU75515.1| ribosomal protein S2 [Neisseria meningitidis NM3081]
Length = 242
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|17547645|ref|NP_521047.1| transcription modulator protein [Ralstonia solanacearum GMI1000]
gi|300690254|ref|YP_003751249.1| stringent starvation protein A [Ralstonia solanacearum PSI07]
gi|17429949|emb|CAD16633.1| probable stringent starvation a transcription regulator protein
[Ralstonia solanacearum GMI1000]
gi|299077314|emb|CBJ49940.1| stringent starvation protein A, regulator of transcription
[Ralstonia solanacearum PSI07]
gi|344169059|emb|CCA81382.1| stringent starvation protein A, regulator of transcription [blood
disease bacterium R229]
gi|344172637|emb|CCA85291.1| stringent starvation protein A, regulator of transcription
[Ralstonia syzygii R24]
Length = 203
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+ +LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVSVLENEKGKAAEKSHEKARAAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|261378607|ref|ZP_05983180.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685]
gi|269144940|gb|EEZ71358.1| ribosomal protein S2 [Neisseria cinerea ATCC 14685]
Length = 242
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|225077475|ref|ZP_03720674.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens
NRL30031/H210]
gi|224951186|gb|EEG32395.1| hypothetical protein NEIFLAOT_02538 [Neisseria flavescens
NRL30031/H210]
gi|254673471|emb|CBA08858.1| 30S ribosomal protein S2 [Neisseria meningitidis alpha275]
Length = 253
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 19 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 78
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 79 LFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 138
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 139 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 198
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 199 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 236
>gi|91785362|ref|YP_560568.1| stringent starvation protein A, SspA [Burkholderia xenovorans
LB400]
gi|170695783|ref|ZP_02886925.1| Glutathione S-transferase domain [Burkholderia graminis C4D1M]
gi|186477488|ref|YP_001858958.1| glutathione S-transferase domain-containing protein [Burkholderia
phymatum STM815]
gi|187925513|ref|YP_001897155.1| glutathione S-transferase [Burkholderia phytofirmans PsJN]
gi|209516573|ref|ZP_03265427.1| Glutathione S-transferase domain [Burkholderia sp. H160]
gi|295677835|ref|YP_003606359.1| glutathione S-transferase domain protein [Burkholderia sp.
CCGE1002]
gi|307731155|ref|YP_003908379.1| glutathione S-transferase domain-containing protein [Burkholderia
sp. CCGE1003]
gi|323527501|ref|YP_004229654.1| glutathione S-transferase [Burkholderia sp. CCGE1001]
gi|385207886|ref|ZP_10034754.1| glutathione S-transferase [Burkholderia sp. Ch1-1]
gi|390576749|ref|ZP_10256799.1| glutathione S-transferase [Burkholderia terrae BS001]
gi|420247050|ref|ZP_14750469.1| glutathione S-transferase [Burkholderia sp. BT03]
gi|91689316|gb|ABE32516.1| Stringent starvation protein A, SspA [Burkholderia xenovorans
LB400]
gi|170139388|gb|EDT07574.1| Glutathione S-transferase domain [Burkholderia graminis C4D1M]
gi|184193947|gb|ACC71912.1| Glutathione S-transferase domain [Burkholderia phymatum STM815]
gi|187716707|gb|ACD17931.1| Glutathione S-transferase domain [Burkholderia phytofirmans PsJN]
gi|209503014|gb|EEA03016.1| Glutathione S-transferase domain [Burkholderia sp. H160]
gi|295437678|gb|ADG16848.1| Glutathione S-transferase domain protein [Burkholderia sp.
CCGE1002]
gi|307585690|gb|ADN59088.1| Glutathione S-transferase domain protein [Burkholderia sp.
CCGE1003]
gi|323384503|gb|ADX56594.1| Glutathione S-transferase domain protein [Burkholderia sp.
CCGE1001]
gi|385180224|gb|EIF29500.1| glutathione S-transferase [Burkholderia sp. Ch1-1]
gi|389931327|gb|EIM93405.1| glutathione S-transferase [Burkholderia terrae BS001]
gi|398072486|gb|EJL63700.1| glutathione S-transferase [Burkholderia sp. BT03]
Length = 203
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVGTLENEKGKAAEKNHEKARLAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|350545066|ref|ZP_08914578.1| Stringent starvation protein A [Candidatus Burkholderia kirkii
UZHbot1]
gi|350527131|emb|CCD38796.1| Stringent starvation protein A [Candidatus Burkholderia kirkii
UZHbot1]
Length = 185
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 7 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 66
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARAR+ LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 67 VQRARARMFLLNFEKELFVHVGTLENEKGKAAEKNHEKARGAIRDRLTQLAPIFLKNKYM 126
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 127 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 184
>gi|407714889|ref|YP_006835454.1| RNA polymerase-associated protein [Burkholderia phenoliruptrix
BR3459a]
gi|407237073|gb|AFT87272.1| RNA polymerase-associated protein [Burkholderia phenoliruptrix
BR3459a]
Length = 185
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 7 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 66
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 67 VQRARARLFLLNFEKELFVHVGTLENEKGKAAEKNHEKARLAIRDRLTQLAPIFLKNKYM 126
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 127 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 184
>gi|254467948|ref|ZP_05081354.1| ribosomal protein S2 [beta proteobacterium KB13]
gi|207086758|gb|EDZ64041.1| ribosomal protein S2 [beta proteobacterium KB13]
Length = 244
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 173/218 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM S+IFG RNKIHIINLEKTL ++E+A +++ L +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMESFIFGERNKIHIINLEKTLPLFEEASKFLKNLAANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RAG P+++ RWLGG+LTNFKT+K SI+RL E++ I +GS+
Sbjct: 67 LFVGTKRQAREIVKEEAERAGCPYVNHRWLGGMLTNFKTVKQSIKRLNELETMIADGSLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K+EAL R KL R IGGIK M+ +PDAIF+IDVG+ GAV EA KL IP++G+V
Sbjct: 127 KLKKREALTVKRDHEKLVRSIGGIKEMSSLPDAIFVIDVGFESGAVEEATKLGIPVVGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+N+S + I+YVIPGNDDS+++I LY +G+ DA L K
Sbjct: 187 DSNNSIENISYVIPGNDDSSRAIRLYARGMADAVLAGK 224
>gi|238026024|ref|YP_002910255.1| glutathione S-transferase [Burkholderia glumae BGR1]
gi|330815340|ref|YP_004359045.1| glutathione S-transferase [Burkholderia gladioli BSR3]
gi|237875218|gb|ACR27551.1| Glutathione S-transferase [Burkholderia glumae BGR1]
gi|327367733|gb|AEA59089.1| Glutathione S-transferase [Burkholderia gladioli BSR3]
Length = 203
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKNHEKARLAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|394988465|ref|ZP_10381300.1| 30S ribosomal protein S2 [Sulfuricella denitrificans skB26]
gi|393791844|dbj|GAB70939.1| 30S ribosomal protein S2 [Sulfuricella denitrificans skB26]
Length = 245
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 177/219 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL MY+ A++++ +L +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPYIFGDRNKIHIINLEKTLPMYQDAMKFMRKLASNKGNI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RAG F++ RWLGG+LTNFKT+K SI+RL+E+ ++ +I
Sbjct: 67 LFVGTKRQAREILKEEAERAGCHFVNFRWLGGMLTNFKTVKQSIKRLQEVQTMLSEENIS 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEALL R+ KL R +GGIK+M +PD IF+IDVG+ KGA++EA KL IP++GVV
Sbjct: 127 KLAKKEALLLRRELDKLERSLGGIKDMGGLPDMIFVIDVGHEKGAITEANKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN+SP GINYVIPGNDDS ++I LY +G DA L+ ++
Sbjct: 187 DTNNSPIGINYVIPGNDDSTQAIRLYVRGAADAILEGRS 225
>gi|78065019|ref|YP_367788.1| glutathione S-transferase [Burkholderia sp. 383]
gi|107024207|ref|YP_622534.1| glutathione S-transferase [Burkholderia cenocepacia AU 1054]
gi|115350417|ref|YP_772256.1| glutathione S-transferase domain-containing protein [Burkholderia
ambifaria AMMD]
gi|116688468|ref|YP_834091.1| glutathione S-transferase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|134294535|ref|YP_001118270.1| glutathione S-transferase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|161523527|ref|YP_001578539.1| glutathione S-transferase domain-containing protein [Burkholderia
multivorans ATCC 17616]
gi|167587677|ref|ZP_02380065.1| Glutathione S-transferase domain [Burkholderia ubonensis Bu]
gi|170699493|ref|ZP_02890535.1| Glutathione S-transferase domain [Burkholderia ambifaria IOP40-10]
gi|170731778|ref|YP_001763725.1| glutathione S-transferase domain-containing protein [Burkholderia
cenocepacia MC0-3]
gi|171316501|ref|ZP_02905718.1| Glutathione S-transferase domain [Burkholderia ambifaria MEX-5]
gi|172059436|ref|YP_001807088.1| glutathione S-transferase domain-containing protein [Burkholderia
ambifaria MC40-6]
gi|189351700|ref|YP_001947328.1| stringent starvation protein A [Burkholderia multivorans ATCC
17616]
gi|206558737|ref|YP_002229497.1| putative stringent starvation protein A [Burkholderia cenocepacia
J2315]
gi|221201666|ref|ZP_03574704.1| stringent starvation protein A [Burkholderia multivorans CGD2M]
gi|221207259|ref|ZP_03580269.1| stringent starvation protein A [Burkholderia multivorans CGD2]
gi|221213398|ref|ZP_03586373.1| glutathione S-transferase, N- domain [Burkholderia multivorans
CGD1]
gi|254246509|ref|ZP_04939830.1| Glutathione S-transferase [Burkholderia cenocepacia PC184]
gi|254253432|ref|ZP_04946750.1| Glutathione S-transferase [Burkholderia dolosa AUO158]
gi|387901122|ref|YP_006331461.1| Stringent starvation protein A [Burkholderia sp. KJ006]
gi|416948860|ref|ZP_11935247.1| putative stringent starvation protein A [Burkholderia sp. TJI49]
gi|421471550|ref|ZP_15919830.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
multivorans ATCC BAA-247]
gi|421474029|ref|ZP_15922093.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
multivorans CF2]
gi|421864021|ref|ZP_16295709.1| Stringent starvation protein A [Burkholderia cenocepacia H111]
gi|444360153|ref|ZP_21161409.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
cenocepacia BC7]
gi|444367245|ref|ZP_21167221.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
cenocepacia K56-2Valvano]
gi|77965764|gb|ABB07144.1| Glutathione S-transferase [Burkholderia sp. 383]
gi|105894396|gb|ABF77561.1| glutathione S-transferase-like protein [Burkholderia cenocepacia AU
1054]
gi|115280405|gb|ABI85922.1| Glutathione S-transferase, N-terminal domain protein [Burkholderia
ambifaria AMMD]
gi|116646557|gb|ABK07198.1| Glutathione S-transferase, N-terminal domain protein [Burkholderia
cenocepacia HI2424]
gi|124871285|gb|EAY63001.1| Glutathione S-transferase [Burkholderia cenocepacia PC184]
gi|124896041|gb|EAY69921.1| Glutathione S-transferase [Burkholderia dolosa AUO158]
gi|134137692|gb|ABO53435.1| Glutathione S-transferase, N-terminal domain protein [Burkholderia
vietnamiensis G4]
gi|160340956|gb|ABX14042.1| Glutathione S-transferase domain [Burkholderia multivorans ATCC
17616]
gi|169815020|gb|ACA89603.1| Glutathione S-transferase domain [Burkholderia cenocepacia MC0-3]
gi|170135580|gb|EDT03866.1| Glutathione S-transferase domain [Burkholderia ambifaria IOP40-10]
gi|171098335|gb|EDT43140.1| Glutathione S-transferase domain [Burkholderia ambifaria MEX-5]
gi|171991953|gb|ACB62872.1| Glutathione S-transferase domain protein [Burkholderia ambifaria
MC40-6]
gi|189335722|dbj|BAG44792.1| stringent starvation protein A [Burkholderia multivorans ATCC
17616]
gi|198034774|emb|CAR50641.1| putative stringent starvation protein A [Burkholderia cenocepacia
J2315]
gi|221166850|gb|EED99321.1| glutathione S-transferase, N- domain [Burkholderia multivorans
CGD1]
gi|221172847|gb|EEE05284.1| stringent starvation protein A [Burkholderia multivorans CGD2]
gi|221178482|gb|EEE10891.1| stringent starvation protein A [Burkholderia multivorans CGD2M]
gi|325523462|gb|EGD01785.1| putative stringent starvation protein A [Burkholderia sp. TJI49]
gi|358075974|emb|CCE46587.1| Stringent starvation protein A [Burkholderia cenocepacia H111]
gi|387576014|gb|AFJ84730.1| Stringent starvation protein A [Burkholderia sp. KJ006]
gi|400225295|gb|EJO55471.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
multivorans ATCC BAA-247]
gi|400233053|gb|EJO62634.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
multivorans CF2]
gi|443600605|gb|ELT68787.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
cenocepacia BC7]
gi|443603133|gb|ELT71158.1| glutathione S-transferase, N-terminal domain protein [Burkholderia
cenocepacia K56-2Valvano]
Length = 203
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 161/178 (90%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL LLNFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VQRARARLFLLNFEKELFVHVSTLENEKGKAAEKNHEKARLAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|418532387|ref|ZP_13098295.1| 30S ribosomal protein S2 [Comamonas testosteroni ATCC 11996]
gi|371450618|gb|EHN63662.1| 30S ribosomal protein S2 [Comamonas testosteroni ATCC 11996]
Length = 250
Score = 293 bits (750), Expect = 3e-76, Method: Composition-based stats.
Identities = 137/218 (62%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFG RNKIHIINLEK+L M+++A ++ QL + GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTANGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK A++EA KL IP++GVV
Sbjct: 126 SMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 186 DTNHNPEGIDYVIPGNDDSAKAVELYARGIADAILEGR 223
>gi|83747522|ref|ZP_00944560.1| Stringent starvation protein A [Ralstonia solanacearum UW551]
gi|207744484|ref|YP_002260876.1| stringent starvation protein a [Ralstonia solanacearum IPO1609]
gi|300702874|ref|YP_003744475.1| stringent starvation protein a, regulator of transcription
[Ralstonia solanacearum CFBP2957]
gi|421890544|ref|ZP_16321402.1| stringent starvation protein A, regulator of transcription
[Ralstonia solanacearum K60-1]
gi|421895808|ref|ZP_16326207.1| stringent starvation protein a [Ralstonia solanacearum MolK2]
gi|83725836|gb|EAP72976.1| Stringent starvation protein A [Ralstonia solanacearum UW551]
gi|206586973|emb|CAQ17557.1| stringent starvation protein a [Ralstonia solanacearum MolK2]
gi|206595890|emb|CAQ62817.1| stringent starvation protein a [Ralstonia solanacearum IPO1609]
gi|299070536|emb|CBJ41831.1| stringent starvation protein A, regulator of transcription
[Ralstonia solanacearum CFBP2957]
gi|378964154|emb|CCF98150.1| stringent starvation protein A, regulator of transcription
[Ralstonia solanacearum K60-1]
Length = 203
Score = 293 bits (750), Expect = 4e-76, Method: Composition-based stats.
Identities = 134/178 (75%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+ +LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVAVLENEKGKAAEKSHEKARAAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIELSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|221066085|ref|ZP_03542190.1| ribosomal protein S2 [Comamonas testosteroni KF-1]
gi|220711108|gb|EED66476.1| ribosomal protein S2 [Comamonas testosteroni KF-1]
Length = 250
Score = 293 bits (749), Expect = 4e-76, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFG RNKIHIINLEK+L M+++A ++ QL + GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTANGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEEAKRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK A++EA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 186 DTNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>gi|224825013|ref|ZP_03698119.1| ribosomal protein S2 [Pseudogulbenkiania ferrooxidans 2002]
gi|347540373|ref|YP_004847798.1| 30S ribosomal protein S2 [Pseudogulbenkiania sp. NH8B]
gi|224602684|gb|EEG08861.1| ribosomal protein S2 [Pseudogulbenkiania ferrooxidans 2002]
gi|345643551|dbj|BAK77384.1| ribosomal protein S2 [Pseudogulbenkiania sp. NH8B]
Length = 242
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/240 (57%), Positives = 178/240 (74%), Gaps = 6/240 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHIINLEKTL ++ +A Y+ +L +KGT+
Sbjct: 9 QMLEAGVHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAANKGTV 68
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA R GMPF+D RWLGG+LTN+KT+K SI+RL+E + +
Sbjct: 69 LFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILESSGDT 128
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY KG V EA KL IP+IGVV
Sbjct: 129 GYNKKELLDLEREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTVVEAKKLGIPLIGVV 188
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
DTN+SP+GINYVIPGNDDS ++I LY +GI DA L+ R+++L I+ + A E
Sbjct: 189 DTNNSPEGINYVIPGNDDSNRAIRLYARGIADAVLEG------RAQSLQEIVAAEPAQAE 242
>gi|298370349|ref|ZP_06981665.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314]
gi|298281809|gb|EFI23298.1| ribosomal protein S2 [Neisseria sp. oral taxon 014 str. F0314]
Length = 242
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM YIFG RNKIHI+NLEKTL M+ +A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMEQYIFGARNKIHIVNLEKTLPMFLEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFGKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|319779544|ref|YP_004130457.1| 30S ribosomal protein S2 [Taylorella equigenitalis MCE9]
gi|317109568|gb|ADU92314.1| SSU ribosomal protein S2p (SAe) [Taylorella equigenitalis MCE9]
Length = 260
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 174/217 (80%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ Y +A+ +I + +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTIEKYLEALAFIRKTASRGEDIL 66
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR AR +IA EA RAGMP+++ RWLGG++TNFKT+++SI+RLK+M+ +GS+ +
Sbjct: 67 FVGTKRSAREIIAEEASRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMEAAQNDGSLER 126
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL F R KLN+ IGGIK+MN +P A+FI+DVGYHK A+ EA L IP++ VVD
Sbjct: 127 LTKKEALDFTRDLEKLNKSIGGIKDMNRLPSALFIVDVGYHKIAIQEARTLGIPVVAVVD 186
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TNHSP+GI+Y+IPGNDDS++++ +Y +G+ +A L+ +
Sbjct: 187 TNHSPEGIDYIIPGNDDSSRAVQIYAEGVANAILEGR 223
>gi|187930270|ref|YP_001900757.1| glutathione S-transferase domain-containing protein [Ralstonia
pickettii 12J]
gi|241664438|ref|YP_002982798.1| glutathione S-transferase [Ralstonia pickettii 12D]
gi|309782928|ref|ZP_07677648.1| stringent starvation protein A [Ralstonia sp. 5_7_47FAA]
gi|404397624|ref|ZP_10989414.1| hypothetical protein HMPREF0989_03774 [Ralstonia sp. 5_2_56FAA]
gi|187727160|gb|ACD28325.1| Glutathione S-transferase domain [Ralstonia pickettii 12J]
gi|240866465|gb|ACS64126.1| Glutathione S-transferase domain protein [Ralstonia pickettii 12D]
gi|308918352|gb|EFP64029.1| stringent starvation protein A [Ralstonia sp. 5_7_47FAA]
gi|348612605|gb|EGY62219.1| hypothetical protein HMPREF0989_03774 [Ralstonia sp. 5_2_56FAA]
Length = 203
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLFNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F H+ +LENE+ K + K +++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VQRARARLFLFNFEKELFTHVSVLENEKGKAAEKNHEKARAAIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI +SK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLDHYGIEVSKNAAPLMKYAERIFSRPAYIEALTPSEKVMR 202
>gi|451823033|ref|YP_007459307.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775833|gb|AGF46874.1| small subunit ribosomal protein S2 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 245
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 176/218 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+SYIFG RNKIHIINLEKT+ Y +A+ +I S +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMASYIFGRRNKIHIINLEKTVEKYLEAVDFIKNASSSNKNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR IA+ AV+ MP+++ RWLGG+LTNFKT+K SI+RLK+M+ + +G+
Sbjct: 66 LFVGTKRAAREFIADAAVKCNMPYVNHRWLGGMLTNFKTVKASIKRLKDMENQVESGNTD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKE+LLF+R+ KLNR IGGIKN++ +PD +F++DVGYHK A+SEA L I ++ VV
Sbjct: 126 KMTKKESLLFHRELDKLNRSIGGIKNISGLPDILFVVDVGYHKIAISEAKALGIKVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++YVIPGNDDSAK+I+ YT GI +A L+ +
Sbjct: 186 DTNHSPDGVDYVIPGNDDSAKAISFYTNGIANAVLEGR 223
>gi|160900378|ref|YP_001565960.1| uridylate kinase [Delftia acidovorans SPH-1]
gi|333913548|ref|YP_004487280.1| uridylate kinase [Delftia sp. Cs1-4]
gi|160365962|gb|ABX37575.1| uridylate kinase [Delftia acidovorans SPH-1]
gi|333743748|gb|AEF88925.1| uridylate kinase [Delftia sp. Cs1-4]
Length = 240
Score = 292 bits (748), Expect = 6e-76, Method: Composition-based stats.
Identities = 138/223 (61%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN + I+ ++SEI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDSFGINRATIERMVSEIAEVTRVGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+I+ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLIARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y DP K +A Y K+ FDE IS+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTDDPMKNPNATRYHKLAFDEAISRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPIRVFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIRVFSIIKPGALKRVVMGEDEGTLVY 239
>gi|397661775|ref|YP_006502475.1| 30S ribosomal protein S2 [Taylorella equigenitalis ATCC 35865]
gi|394349954|gb|AFN35868.1| 30S ribosomal protein S2 [Taylorella equigenitalis ATCC 35865]
gi|399115140|emb|CCG17939.1| 30S ribosomal protein S2 [Taylorella equigenitalis 14/56]
Length = 260
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 174/217 (80%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ Y +A+ +I + +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTIEKYLEALAFIRKTASRGEDIL 66
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR AR +IA EA RAGMP+++ RWLGG++TNFKT+++SI+RLK+M+ +GS+ +
Sbjct: 67 FVGTKRSAREIIAEEASRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMEAAQNDGSLER 126
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL F R KLN+ IGGIK+MN +P A+FI+DVGYHK A+ EA L IP++ VVD
Sbjct: 127 LTKKEALDFTRDLEKLNKSIGGIKDMNRLPSALFIVDVGYHKIAIQEARTLGIPVVAVVD 186
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TNHSP+GI+Y+IPGNDDS++++ +Y +G+ +A L+ +
Sbjct: 187 TNHSPEGIDYIIPGNDDSSRAVQIYAEGVANAILEGR 223
>gi|395005222|ref|ZP_10389114.1| uridylate kinase [Acidovorax sp. CF316]
gi|394316802|gb|EJE53503.1| uridylate kinase [Acidovorax sp. CF316]
Length = 240
Score = 292 bits (747), Expect = 7e-76, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+I+ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLIARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K++FDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPQKDPTATRYTKLSFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP+RVFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVRVFSIIKHGALKRVVMGEDEGTLVY 239
>gi|120610505|ref|YP_970183.1| uridylate kinase [Acidovorax citrulli AAC00-1]
gi|171769193|sp|A1TN71.1|PYRH_ACIAC RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|120588969|gb|ABM32409.1| uridylate kinase [Acidovorax citrulli AAC00-1]
Length = 240
Score = 291 bits (746), Expect = 9e-76, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+I+ VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLIARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K+TFDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPKKDPTATRYTKLTFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I+D+TAF+ CRDQKLPIRVFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GILDATAFALCRDQKLPIRVFSIVKHGALKRVVMGEDEGTLVY 239
>gi|351728182|ref|ZP_08945873.1| uridylate kinase [Acidovorax radicis N35]
Length = 240
Score = 291 bits (746), Expect = 1e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K++FDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPQKDPTATRYTKLSFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP+RVFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVRVFSIIKHGALKRVVMGEDEGTLVY 239
>gi|34497651|ref|NP_901866.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472]
gi|61215687|sp|Q7NVZ4.1|RS2_CHRVO RecName: Full=30S ribosomal protein S2
gi|34103507|gb|AAQ59869.1| 30S ribosomal protein S2 [Chromobacterium violaceum ATCC 12472]
Length = 243
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 169/219 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHIINLEKTL ++ +A Y+ +L +KGT+
Sbjct: 9 QMLEAGVHFGHQTRFWNPKMAKYIFGSRNKIHIINLEKTLPLFVEAQEYVRRLAANKGTV 68
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKRQAR ++ EA R GMPF+D RWLGG+LTN+KT+K SI+RL+E +
Sbjct: 69 MFVGTKRQAREIVREEAARCGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKRAILEGAGET 128
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY KG + EA KL IP+IGVV
Sbjct: 129 GYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFVIDTGYQKGTIVEAKKLGIPVIGVV 188
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN+SPDGI+YV+PGNDDS+++I LY +GI DA L+ +
Sbjct: 189 DTNNSPDGIDYVVPGNDDSSRAIRLYARGIADAVLEGRA 227
>gi|225023956|ref|ZP_03713148.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC
23834]
gi|224942981|gb|EEG24190.1| hypothetical protein EIKCOROL_00823 [Eikenella corrodens ATCC
23834]
Length = 247
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL ++++A + +L +KGT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMEQYIFGARNKIHIINLEKTLPLFQEAQDAVRRLAANKGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 68 LFVGTKRQARDIVREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAILENAEAS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIKNM +PDAIF+ID GY KG ++EA KL IP+IGVV
Sbjct: 128 GYNKKELLTIQREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLTEAGKLGIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P+G+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNDPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|121594921|ref|YP_986817.1| uridylate kinase [Acidovorax sp. JS42]
gi|222110428|ref|YP_002552692.1| uridylate kinase [Acidovorax ebreus TPSY]
gi|171769420|sp|A1W916.1|PYRH_ACISJ RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|120607001|gb|ABM42741.1| uridylate kinase [Acidovorax sp. JS42]
gi|221729872|gb|ACM32692.1| uridylate kinase [Acidovorax ebreus TPSY]
Length = 240
Score = 291 bits (745), Expect = 1e-75, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+ + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K SA Y K+TFDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPMKDPSATRYAKLTFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I+D+TAF+ CRDQKLPIRVFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GILDATAFALCRDQKLPIRVFSIVKHGALKRVVMGEDEGTLVY 239
>gi|337279382|ref|YP_004618854.1| uridylate kinase [Ramlibacter tataouinensis TTB310]
gi|334730459|gb|AEG92835.1| uridylate kinase (Uridine monophosphate kinase)-like protein
[Ramlibacter tataouinensis TTB310]
Length = 240
Score = 291 bits (745), Expect = 1e-75, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 181/223 (81%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I ++ E++E+V G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRSTIVRMVQEVAEVVHMGVQVAVVIGGGNIFRGVAGGAVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D +NK G+I+ VMSAI+IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 77 YMGMLATVMNALALADAMNKQGLIARVMSAIAIEQVVEPYVRPKALQYLEEGKVVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y++DP K SA Y +++FD+ +++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYSADPKKDPSATRYNQLSFDQAMNQNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPI+VFSI K+GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSIFKNGALKRVVMGEDEGTLVY 239
>gi|422319092|ref|ZP_16400174.1| uridylate kinase [Achromobacter xylosoxidans C54]
gi|317406266|gb|EFV86510.1| uridylate kinase [Achromobacter xylosoxidans C54]
Length = 238
Score = 291 bits (745), Expect = 1e-75, Method: Composition-based stats.
Identities = 146/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGDDAFGINRSTIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGIDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK SA Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPSATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|121608412|ref|YP_996219.1| uridylate kinase [Verminephrobacter eiseniae EF01-2]
gi|171769485|sp|A1WHU4.1|PYRH_VEREI RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|121553052|gb|ABM57201.1| uridylate kinase [Verminephrobacter eiseniae EF01-2]
Length = 240
Score = 291 bits (745), Expect = 1e-75, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGSDAFGINHATIVRMVQEIAEVTRLGVQVAVVIGGGNIFRGVAGGAVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D +NK +++ VMSAI+IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 77 YMGMLATVMNALALADAMNKQALVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K++FDE +++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPQKDPTATRYAKLSFDEAMARNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQ+LP+RVFSIIK GA KRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQRLPVRVFSIIKHGAFKRVVMGEDEGTLVY 239
>gi|226940993|ref|YP_002796067.1| 30S ribosomal protein S2 [Laribacter hongkongensis HLHK9]
gi|226715920|gb|ACO75058.1| RpsB [Laribacter hongkongensis HLHK9]
Length = 244
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 173/227 (76%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M + ++++AGVHFGHQTRFWNPKM+ YIFG RNKIHIINLEKTL M+ +A Y+ +
Sbjct: 1 MSTQVTMRQMLEAGVHFGHQTRFWNPKMNQYIFGARNKIHIINLEKTLPMFIEAQNYVRR 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L +KG +LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL++
Sbjct: 61 LAANKGQILFVGTKRQAREIIREEASRAGMPFVDYRWLGGMLTNYKTVKQSIKRLEDKMA 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+ N +KKE L R+ KL R +GGIK+M +PDAIFIID GY KG ++EA KL
Sbjct: 121 LLGNADQTGYNKKELLDLQREVEKLERSLGGIKDMKGLPDAIFIIDTGYQKGTLTEAKKL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
IP+IGVVDTN++PDGI+YV+PGNDDSA++I LY +G+ DA L+ +
Sbjct: 181 GIPVIGVVDTNNNPDGIDYVVPGNDDSARAIRLYARGMADAVLEGRA 227
>gi|300311495|ref|YP_003775587.1| uridylate kinase [Herbaspirillum seropedicae SmR1]
gi|300074280|gb|ADJ63679.1| uridylate kinase protein [Herbaspirillum seropedicae SmR1]
Length = 238
Score = 291 bits (744), Expect = 2e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++EI G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + ++G+ + VMSAI IE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKIVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y +DP K SA Y+ I+FDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPSATRYQSISFDEAIAKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALK V+ G +EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKSVVMGDDEGTLVH 237
>gi|241764759|ref|ZP_04762768.1| uridylate kinase [Acidovorax delafieldii 2AN]
gi|241365749|gb|EER60421.1| uridylate kinase [Acidovorax delafieldii 2AN]
Length = 240
Score = 290 bits (743), Expect = 2e-75, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDSFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K SA Y K++FDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPQKDPSATRYTKLSFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP++VFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVKVFSIIKHGALKRVVMGEDEGTLVY 239
>gi|91788555|ref|YP_549507.1| uridylate kinase [Polaromonas sp. JS666]
gi|123164797|sp|Q12A33.1|PYRH_POLSJ RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|91697780|gb|ABE44609.1| uridylate kinase [Polaromonas sp. JS666]
Length = 236
Score = 290 bits (743), Expect = 2e-75, Method: Composition-based stats.
Identities = 137/223 (61%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINHATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K+G+I+ VMSAI IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 73 YMGMLATVMNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQYLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y +DP K A Y ITFDE + K L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPRATRYTNITFDEAMGKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+TAF+ CRDQKLPI+VFSI K GALKRV++G++EGTLV+
Sbjct: 193 EVMDATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVH 235
>gi|326316575|ref|YP_004234247.1| uridylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373411|gb|ADX45680.1| uridylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 240
Score = 290 bits (743), Expect = 2e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDSFGINRATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+I+ VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLIARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K+TFDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPKKDPTATRYTKLTFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I+D+TAF+ CRDQKLPIRVFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GILDATAFALCRDQKLPIRVFSIVKHGALKRVVMGEDEGTLVY 239
>gi|423017270|ref|ZP_17007991.1| uridylate kinase [Achromobacter xylosoxidans AXX-A]
gi|338779719|gb|EGP44154.1| uridylate kinase [Achromobacter xylosoxidans AXX-A]
Length = 238
Score = 290 bits (743), Expect = 2e-75, Method: Composition-based stats.
Identities = 145/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN + I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGDDAFGINRATIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGIDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK SA Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPSATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|365096685|ref|ZP_09331128.1| uridylate kinase [Acidovorax sp. NO-1]
gi|363413711|gb|EHL20903.1| uridylate kinase [Acidovorax sp. NO-1]
Length = 240
Score = 290 bits (742), Expect = 3e-75, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K++FDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPQKDPTATRYTKLSFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP++VFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVKVFSIIKHGALKRVVMGEDEGTLVY 239
>gi|359800347|ref|ZP_09302892.1| uridylate kinase [Achromobacter arsenitoxydans SY8]
gi|359361676|gb|EHK63428.1| uridylate kinase [Achromobacter arsenitoxydans SY8]
Length = 238
Score = 290 bits (742), Expect = 3e-75, Method: Composition-based stats.
Identities = 145/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RAYKRVLLKLS--GEALMGDDAFGINRSTIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGIDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 SRISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|357406289|ref|YP_004918213.1| 30S ribosomal protein S2 [Methylomicrobium alcaliphilum 20Z]
gi|351718954|emb|CCE24628.1| 30S ribosomal subunit protein S2 [Methylomicrobium alcaliphilum
20Z]
Length = 250
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 175/221 (79%), Gaps = 1/221 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM++Y+FG RNKIHIINLEKTL ++ A+ Y+ Q+ +KGT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMANYLFGARNKIHIINLEKTLPLFNDAMNYLGQMSANKGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI- 293
LFVGTK+ AR +A EA R GMP++D RWLGG+LTNFKTIK SI RLKE++ T+G++
Sbjct: 68 LFVGTKKAARKAVAEEAKRCGMPYVDHRWLGGMLTNFKTIKKSINRLKELEAMKTDGTLY 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
K SKKEAL R+ KL R +GGIK+M +PD +F++DVGY K A+ EA KL IP++G+
Sbjct: 128 HKFSKKEALGMERELAKLERSLGGIKDMKGVPDVLFVLDVGYEKNAIGEAKKLGIPVVGI 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
VD+N+SP+ ++Y+IPGNDDS +++ LY + + DA L+AK+
Sbjct: 188 VDSNNSPESVDYIIPGNDDSIRAVKLYCESVADAVLEAKSA 228
>gi|311105985|ref|YP_003978838.1| UMP kinase [Achromobacter xylosoxidans A8]
gi|310760674|gb|ADP16123.1| UMP kinase [Achromobacter xylosoxidans A8]
Length = 238
Score = 290 bits (742), Expect = 3e-75, Method: Composition-based stats.
Identities = 143/236 (60%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + E++E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RAYKRVLLKLS--GEALMGDDAFGINRSTIVRMTDEVAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 SRISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|239815582|ref|YP_002944492.1| uridylate kinase [Variovorax paradoxus S110]
gi|239802159|gb|ACS19226.1| uridylate kinase [Variovorax paradoxus S110]
Length = 240
Score = 290 bits (741), Expect = 4e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ E++E+V+ G+E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEVAEVVNMGVEVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D +NK G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNSLALADAMNKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y++DP A Y +TFDE I++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYSADPKTHPDATRYSTLTFDEAIAQNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPI+VFSI K+GALKRV+ G++EGTLV+
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSIFKNGALKRVVMGEDEGTLVH 239
>gi|407938521|ref|YP_006854162.1| uridylate kinase [Acidovorax sp. KKS102]
gi|407896315|gb|AFU45524.1| uridylate kinase [Acidovorax sp. KKS102]
Length = 240
Score = 290 bits (741), Expect = 4e-75, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDSFGINRATIVRMVEEIAEVTRLGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y K++FDE +S+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPQKDPTATRYTKLSFDEAMSRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP++VFSIIK GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVKVFSIIKHGALKRVVMGEDEGTLVY 239
>gi|347820621|ref|ZP_08874055.1| uridylate kinase [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 240
Score = 290 bits (741), Expect = 4e-75, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G++LA+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRVVEEIAEVTRLGVQLAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+++ VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLVARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K A Y K++FDE +++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPQKDPKATRYTKLSFDEAMARNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLP+RVFSI+K GA +RV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPVRVFSIVKHGAFQRVVMGEDEGTLVY 239
>gi|409405992|ref|ZP_11254454.1| uridylate kinase [Herbaspirillum sp. GW103]
gi|386434541|gb|EIJ47366.1| uridylate kinase [Herbaspirillum sp. GW103]
Length = 238
Score = 290 bits (741), Expect = 4e-75, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I+ ++++++EI G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + ++G+ + VMSAI IE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 75 YMGMLATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKIVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y +DP K +A Y+ I+FDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPTATRYQSISFDEAIAKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALK V+ G +EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALKSVVMGDDEGTLVH 237
>gi|319940994|ref|ZP_08015331.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B]
gi|319805567|gb|EFW02362.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 3_1_45B]
Length = 255
Score = 289 bits (740), Expect = 4e-75, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 174/223 (78%)
Query: 170 LTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGF 229
+ ++++AG HFGHQTRFWNPKM+ YIFG RNKIHIINLEKT+ M+++A+++ QL
Sbjct: 1 MVSMREMLEAGCHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTVVMFDEAVKFARQLAS 60
Query: 230 SKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFIT 289
G +LFV TKR R ++A EA RAG ++DQRWLGG LTNFKT++ +I+RLK+M+ +
Sbjct: 61 QGGRILFVDTKRGGREIVAQEAQRAGCCWVDQRWLGGTLTNFKTVRGTIKRLKDMEEQLE 120
Query: 290 NGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIP 349
+G+ KL+KKEAL F R KLN+ IGGIK++N +PDA+FI+DVGYHK AV EA KL IP
Sbjct: 121 DGTAAKLTKKEALDFQRHVEKLNKSIGGIKDLNGLPDALFIVDVGYHKIAVQEANKLGIP 180
Query: 350 IIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+IGVVDTN SPDGI+YVIPGNDDS+K++ +Y GI DA + +
Sbjct: 181 VIGVVDTNGSPDGIDYVIPGNDDSSKAVQIYAAGIADAVIAGR 223
>gi|74316803|ref|YP_314543.1| 30S ribosomal protein S2 [Thiobacillus denitrificans ATCC 25259]
gi|123773040|sp|Q3SKN9.1|RS2_THIDA RecName: Full=30S ribosomal protein S2
gi|74056298|gb|AAZ96738.1| Ribosomal protein S2 [Thiobacillus denitrificans ATCC 25259]
Length = 248
Score = 289 bits (740), Expect = 4e-75, Method: Composition-based stats.
Identities = 133/218 (61%), Positives = 177/218 (81%), Gaps = 2/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ +IFGHRNKIHI+NLEK+L M+++A +++ QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPFIFGHRNKIHIVNLEKSLPMFQEAQKFVRQLSANKGNV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++ EA RAGMP++DQRWLGG+LTNFKT+K SI+RL +++ I
Sbjct: 67 LFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFKTVKQSIKRLNDLEAQIAEPG-- 124
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKE L R+ KLNR +GGI+ M +PDA+FIIDVGY KGAV EA KL IP+IGVV
Sbjct: 125 RLSKKEILTVQREVDKLNRSLGGIREMGGLPDALFIIDVGYQKGAVVEAKKLGIPVIGVV 184
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SP+G++YVIPGNDDSA++I LY +G+ DA L+ +
Sbjct: 185 DTNNSPEGVDYVIPGNDDSARAIRLYARGMADAALEGR 222
>gi|293605058|ref|ZP_06687451.1| UMP kinase [Achromobacter piechaudii ATCC 43553]
gi|292816560|gb|EFF75648.1| UMP kinase [Achromobacter piechaudii ATCC 43553]
Length = 238
Score = 289 bits (740), Expect = 5e-75, Method: Composition-based stats.
Identities = 145/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RAYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGIDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|399116106|emb|CCG18910.1| 30S ribosomal protein S2 [Taylorella asinigenitalis 14/45]
Length = 263
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 188/257 (73%), Gaps = 9/257 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ +IFG RNKIHIINLEKT+ Y +A+ +I + +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPFIFGQRNKIHIINLEKTIEKYLEALAFIRKTAARGEDIL 66
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ +IA EA RAGMP+++ RWLGG++TNFKT+++SI+RLK+M+ +GS+ +
Sbjct: 67 FVGTKRSAKDIIAEEATRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMETAQNDGSLER 126
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
LSKKEAL F R KLN+ IGGIK+M +P A+FIIDVGYHK A+ EA L IP++ VVD
Sbjct: 127 LSKKEALDFNRDLEKLNKSIGGIKDMARLPSALFIIDVGYHKIAIQEARTLGIPVVAVVD 186
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK------TVGELRSKTL---APIM 406
TNHSP+GI+++IPGNDDS++++ +Y +G+ +A L+ + V E++S+ P+
Sbjct: 187 TNHSPEGIDFIIPGNDDSSRAVQIYAEGVANAILEGREQRLNGVVEEIQSEDFDSEEPVE 246
Query: 407 ECKKALIEANGKLSKAE 423
+ E N + S AE
Sbjct: 247 TNSEDFSEENSESSDAE 263
>gi|452125152|ref|ZP_21937736.1| uridylate kinase [Bordetella holmesii F627]
gi|452128561|ref|ZP_21941138.1| uridylate kinase [Bordetella holmesii H558]
gi|451924382|gb|EMD74523.1| uridylate kinase [Bordetella holmesii F627]
gi|451925608|gb|EMD75746.1| uridylate kinase [Bordetella holmesii H558]
Length = 238
Score = 289 bits (740), Expect = 5e-75, Method: Composition-based stats.
Identities = 144/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RPYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVGGEDEGTLVH 237
>gi|421482411|ref|ZP_15929993.1| uridylate kinase [Achromobacter piechaudii HLE]
gi|400199746|gb|EJO32700.1| uridylate kinase [Achromobacter piechaudii HLE]
Length = 238
Score = 289 bits (740), Expect = 5e-75, Method: Composition-based stats.
Identities = 144/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN + I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RAYKRVLLKLS--GEALMGDDAFGINRATIVRMTDEIAEVAATGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGIDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVSGEDEGTLVH 237
>gi|33592519|ref|NP_880163.1| uridylate kinase [Bordetella pertussis Tohama I]
gi|384203823|ref|YP_005589562.1| uridylate kinase [Bordetella pertussis CS]
gi|81425243|sp|Q7VYC8.1|PYRH_BORPE RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|33572165|emb|CAE41711.1| uridylate kinase [Bordetella pertussis Tohama I]
gi|332381937|gb|AEE66784.1| uridylate kinase [Bordetella pertussis CS]
Length = 238
Score = 289 bits (739), Expect = 6e-75, Method: Composition-based stats.
Identities = 144/236 (61%), Positives = 184/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVAALGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDEVI ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKR + G++EGTLV+
Sbjct: 182 ARISFDEVIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRAVSGEDEGTLVH 237
>gi|381152284|ref|ZP_09864153.1| ribosomal protein S2 [Methylomicrobium album BG8]
gi|380884256|gb|EIC30133.1| ribosomal protein S2 [Methylomicrobium album BG8]
Length = 247
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 176/223 (78%), Gaps = 1/223 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMSSY+FG RNKIHIINLEKTL ++ A+ Y+ Q+ +KG +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMSSYLFGARNKIHIINLEKTLPLFNDAMNYLGQMSANKGNI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI- 293
LFVGTK+ AR VIA EA+R GMP+++ RWLGG+LTNFKTIK SI RLKE++ T+G++
Sbjct: 68 LFVGTKKAARKVIAEEAIRCGMPYVNHRWLGGMLTNFKTIKKSINRLKELEAMKTDGTLY 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++ KKEAL+ R+ KL R +GGIK+M IPD IF++DVGY K A+ EA KL IP++GV
Sbjct: 128 QRFGKKEALMMERELEKLERSLGGIKDMRGIPDVIFVLDVGYEKNAIMEAKKLGIPVVGV 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
VD+N+SP+GI+YVIPGNDDS +++ LY + A L+AK +
Sbjct: 188 VDSNNSPEGIDYVIPGNDDSIRAVKLYCECASVAILEAKAAAQ 230
>gi|348590219|ref|YP_004874681.1| 30S ribosomal protein S2p [Taylorella asinigenitalis MCE3]
gi|347974123|gb|AEP36658.1| SSU ribosomal protein S2p (SAe) [Taylorella asinigenitalis MCE3]
Length = 263
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 133/257 (51%), Positives = 188/257 (73%), Gaps = 9/257 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ +IFG RNKIHIINLEKT+ Y +A+ +I + +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPFIFGQRNKIHIINLEKTIEKYLEALAFIRKTAARGEDIL 66
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ +IA EA RAGMP+++ RWLGG++TNFKT+++SI+RLK+M+ +GS+ +
Sbjct: 67 FVGTKRSAKDIIAEEATRAGMPYVNNRWLGGMMTNFKTVRSSIKRLKDMETAQNDGSLER 126
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
LSKKEAL F R KLN+ IGGIK+M +P A+FIIDVGYHK A+ EA L IP++ VVD
Sbjct: 127 LSKKEALDFNRDLEKLNKSIGGIKDMARLPSALFIIDVGYHKIAIQEARTLGIPVVAVVD 186
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK------TVGELRSKTL---APIM 406
TNHSP+GI+++IPGNDDS++++ +Y +G+ +A L+ + V E++S+ P+
Sbjct: 187 TNHSPEGIDFIIPGNDDSSRAVQIYAEGVANAILEGREQRLNGVVEEIQSEDFDSEEPVE 246
Query: 407 ECKKALIEANGKLSKAE 423
+ E N + S AE
Sbjct: 247 TNSEDYSEENSESSDAE 263
>gi|319762177|ref|YP_004126114.1| uridylate kinase [Alicycliphilus denitrificans BC]
gi|330826011|ref|YP_004389314.1| uridylate kinase [Alicycliphilus denitrificans K601]
gi|317116738|gb|ADU99226.1| uridylate kinase [Alicycliphilus denitrificans BC]
gi|329311383|gb|AEB85798.1| uridylate kinase [Alicycliphilus denitrificans K601]
Length = 240
Score = 288 bits (738), Expect = 8e-75, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ E++E+ G+++A+VIGGGNI RG++ + +DR+TAD
Sbjct: 17 GEALMGDDAFGINRNTIVRMVGEVAEVTRLGVQVAVVIGGGNIFRGVAGGAEGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D ++K G+ + VMSAI I++ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNSLALADAMDKQGVTARVMSAIDIQQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K A Y ++TFDE + + L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPMKDPQATRYARLTFDEAMVRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPIRVFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIRVFSILKPGALKRVVMGEDEGTLVY 239
>gi|221066087|ref|ZP_03542192.1| uridylate kinase [Comamonas testosteroni KF-1]
gi|264679365|ref|YP_003279272.1| uridylate kinase [Comamonas testosteroni CNB-2]
gi|299532324|ref|ZP_07045717.1| uridylate kinase [Comamonas testosteroni S44]
gi|418532385|ref|ZP_13098293.1| uridylate kinase [Comamonas testosteroni ATCC 11996]
gi|220711110|gb|EED66478.1| uridylate kinase [Comamonas testosteroni KF-1]
gi|262209878|gb|ACY33976.1| uridylate kinase [Comamonas testosteroni CNB-2]
gi|298719732|gb|EFI60696.1| uridylate kinase [Comamonas testosteroni S44]
gi|371450616|gb|EHN63660.1| uridylate kinase [Comamonas testosteroni ATCC 11996]
Length = 240
Score = 288 bits (738), Expect = 8e-75, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN + I+ +++EI E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDQFGINRATIERMVAEIVEVTKVGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+ + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K SA Y K+ FDE IS+ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPVKDPSATRYDKLAFDEAISRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPIRVFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIRVFSIVKPGALKRVVMGEDEGTLVY 239
>gi|456062459|ref|YP_007501429.1| glutathione S-transferase domain-containing protein [beta
proteobacterium CB]
gi|455439756|gb|AGG32694.1| glutathione S-transferase domain-containing protein [beta
proteobacterium CB]
Length = 203
Score = 288 bits (738), Expect = 8e-75, Method: Composition-based stats.
Identities = 131/178 (73%), Positives = 160/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VARARARLFLFNFEKELFVHVAALENEKGKAAEKSHEKARLAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRL++YGI+LS++A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAIAPLLWRLEHYGIDLSRNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|301632803|ref|XP_002945470.1| PREDICTED: uridylate kinase-like [Xenopus (Silurana) tropicalis]
Length = 240
Score = 288 bits (738), Expect = 8e-75, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++ ++ + G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIERMVEDVVGVTRLGVQVAVVIGGGNIFRGVAGGAVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K G+ + VMSAI+I++ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADAMDKQGLTARVMSAIAIDQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DPNK SA Y K++FDE I++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPNKDPSATRYAKLSFDEAIARNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPIRVFSI+K GAL+RV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIRVFSIVKHGALQRVVMGEDEGTLVY 239
>gi|381402152|ref|ZP_09927031.1| 30S ribosomal protein S2 [Kingella kingae PYKK081]
gi|380832883|gb|EIC12772.1| 30S ribosomal protein S2 [Kingella kingae PYKK081]
Length = 241
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ ++++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + NG
Sbjct: 68 LFVGTKRQAREIIKEEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSAVLANGEAS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 128 GRNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEATKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|445497574|ref|ZP_21464429.1| uridylate kinase PyrH [Janthinobacterium sp. HH01]
gi|444787569|gb|ELX09117.1| uridylate kinase PyrH [Janthinobacterium sp. HH01]
Length = 238
Score = 288 bits (738), Expect = 9e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN I+ ++++++E+ G+ELAIVIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDPYGINRGTIERMVADVAEVAKLGVELAIVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + GI + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 75 YMGMLATVMNALALADAMRHVGITARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AEI+LKATKVDG+Y +DP K +A +Y ITFDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGSEMSAEIVLKATKVDGVYTADPKKDANATLYSSITFDEAIAKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K GAL RVI G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSITKPGALMRVIMGEDEGTLVH 237
>gi|333376337|ref|ZP_08468122.1| 30S ribosomal protein S2 [Kingella kingae ATCC 23330]
gi|332968335|gb|EGK07406.1| 30S ribosomal protein S2 [Kingella kingae ATCC 23330]
Length = 241
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ ++++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + NG
Sbjct: 68 LFVGTKRQAREIIKEEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSAVLANGEAS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 128 GRNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|121604662|ref|YP_981991.1| uridylate kinase [Polaromonas naphthalenivorans CJ2]
gi|166216007|sp|A1VN42.1|PYRH_POLNA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|120593631|gb|ABM37070.1| uridylate kinase [Polaromonas naphthalenivorans CJ2]
Length = 236
Score = 288 bits (738), Expect = 9e-75, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ EI+E+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRATIVRMVEEIAEVTRMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D ++K+G+++ VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 73 YMGMLATVMNALALGDTMDKAGLVARVMSAIGIERVVEPYVRPKALQYLEEGKVVVFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y++DP K A Y ITFDEVI K L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPKKDPEATRYTSITFDEVIGKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+TAF+ CRDQKLPI++FSI K GAL+RV+ G++EGTLV+
Sbjct: 193 EVMDATAFALCRDQKLPIKIFSIFKLGALRRVVMGEDEGTLVH 235
>gi|388567364|ref|ZP_10153798.1| uridylate kinase [Hydrogenophaga sp. PBC]
gi|388265386|gb|EIK90942.1| uridylate kinase [Hydrogenophaga sp. PBC]
Length = 236
Score = 288 bits (737), Expect = 1e-74, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I I+ EI+E+ G+++AIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRATIVRIVDEIAEVTRLGVQVAIVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D +NK+G+++ VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 73 YMGMLATVMNSLALADTMNKAGLVARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DPNK +A Y I+FDE +++ L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEMVLKATKVDGVYTADPNKDPAATRYTTISFDEAMARNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLP++VFSI K GAL+ V+ G +EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPVKVFSIFKPGALRNVVMGADEGTLVH 235
>gi|161609271|ref|NP_889144.2| uridylate kinase [Bordetella bronchiseptica RB50]
gi|408415056|ref|YP_006625763.1| uridylate kinase [Bordetella pertussis 18323]
gi|172045915|sp|Q7WJ92.2|PYRH_BORBR RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|401777226|emb|CCJ62503.1| uridylate kinase [Bordetella pertussis 18323]
Length = 238
Score = 288 bits (736), Expect = 1e-74, Method: Composition-based stats.
Identities = 143/236 (60%), Positives = 183/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVAALGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKR + G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRAVSGEDEGTLVH 237
>gi|345874687|ref|ZP_08826487.1| ribosomal protein S2 [Neisseria weaveri LMG 5135]
gi|343970046|gb|EGV38244.1| ribosomal protein S2 [Neisseria weaveri LMG 5135]
Length = 241
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL ++++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRYWNPKMEQYIFGARNKIHIVNLEKTLPLFQEAQEVVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPYVDYRWLGGMLTNYKTVKQSIKRLEEKAAILENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILDMQREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +G+ DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGMADAVLEGK 225
>gi|398811736|ref|ZP_10570525.1| uridylate kinase [Variovorax sp. CF313]
gi|398079826|gb|EJL70664.1| uridylate kinase [Variovorax sp. CF313]
Length = 240
Score = 288 bits (736), Expect = 1e-74, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 179/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ E++E+V+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVQEVAEVVNMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNSLALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP A Y +TFDE I+K L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYTADPKTNPDATRYATLTFDEAIAKNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPI+VFSI+K+GALKRV+ G++EGTLV+
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSILKNGALKRVVMGEDEGTLVH 239
>gi|417958069|ref|ZP_12600986.1| ribosomal protein S2 [Neisseria weaveri ATCC 51223]
gi|343967461|gb|EGV35706.1| ribosomal protein S2 [Neisseria weaveri ATCC 51223]
Length = 236
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL ++++A + +L +KGT+
Sbjct: 3 QMIEAGVHFGHQTRYWNPKMEQYIFGARNKIHIVNLEKTLPLFQEAQEVVRRLVANKGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 63 LFVGTKRQAREIIREEATRAGMPYVDYRWLGGMLTNYKTVKQSIKRLEEKAAILENAAES 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 123 GFNKKEILDMQREVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +G+ DA L+ K
Sbjct: 183 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGMADAVLEGK 220
>gi|172045701|sp|Q2L160.2|PYRH_BORA1 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
Length = 238
Score = 287 bits (735), Expect = 2e-74, Method: Composition-based stats.
Identities = 143/236 (60%), Positives = 183/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGDDAFGINRSTIVRMTDEIAEVAAMGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI ++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGLDTRVQSALNIDQVVEPYIRPKTLR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRVVGGEDEGTLVH 237
>gi|124267166|ref|YP_001021170.1| uridylate kinase [Methylibium petroleiphilum PM1]
gi|166215998|sp|A2SH96.1|PYRH_METPP RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|124259941|gb|ABM94935.1| uridylate kinase [Methylibium petroleiphilum PM1]
Length = 236
Score = 287 bits (734), Expect = 2e-74, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I ++ E+ EI G E+A+VIGGGN+ RG++ +DR+TAD
Sbjct: 13 GEALMGDDAYGINRATIVRMVQEVREITEMGCEVAVVIGGGNLFRGVAGGAVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + G+ + VMSAI IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 73 YMGMLATVMNALALADTMRQEGMTARVMSAIGIEQVVEPYVRPKALQYLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI A+I+LKATKVDG+Y++DP K A Y KI+FDE ISK L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAQIVLKATKVDGVYSADPKKDPGATRYAKISFDEAISKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K GAL+RV+ G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIFKPGALRRVVTGEDEGTLVH 235
>gi|390951029|ref|YP_006414788.1| 30S ribosomal protein S2 [Thiocystis violascens DSM 198]
gi|390427598|gb|AFL74663.1| ribosomal protein S2 [Thiocystis violascens DSM 198]
Length = 249
Score = 287 bits (734), Expect = 2e-74, Method: Composition-based stats.
Identities = 125/218 (57%), Positives = 175/218 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS++IFGHRNKIHI+NLEKTL +Y+ A+ ++ L + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMSAFIFGHRNKIHIVNLEKTLPLYQDAVNFMGTLAANGGKI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I +EA R GMPF++ RWLGG+LTNFKTI+ S++RLK++++ +G+I
Sbjct: 63 LFVGTKRAARDAIRDEAARCGMPFVNHRWLGGMLTNFKTIRQSVKRLKDLEVMFESGTIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R+++KL + +GGIKNM+ +PDA+F+IDVG+ K AV+EA KL IP+IGVV
Sbjct: 123 RFNKKEALGLSRERVKLEQSLGGIKNMDGLPDAMFVIDVGHEKIAVTEANKLGIPVIGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++YVIPGNDD+ +++ LY G DA LD +
Sbjct: 183 DTNNDPSNVDYVIPGNDDAIRAVQLYIAGAADAILDGR 220
>gi|194099757|ref|YP_002002892.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945]
gi|240015553|ref|ZP_04722093.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA6140]
gi|240120181|ref|ZP_04733143.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID24-1]
gi|193935047|gb|ACF30871.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae NCCP11945]
Length = 237
Score = 287 bits (734), Expect = 2e-74, Method: Composition-based stats.
Identities = 137/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 3 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 63 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 123 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 183 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 220
>gi|89900776|ref|YP_523247.1| uridylate kinase [Rhodoferax ferrireducens T118]
gi|123397222|sp|Q21WY7.1|PYRH_RHOFD RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|89345513|gb|ABD69716.1| uridylate kinase [Rhodoferax ferrireducens T118]
Length = 240
Score = 287 bits (734), Expect = 2e-74, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN I ++ EI+E+ G+E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDQFGINHDTIVRMVDEIAEVTRLGVEVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D +NK+G+ + VMSAI+IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 77 YMGMLATVMNALALGDTMNKAGLTARVMSAIAIEQVVEPYVRPKALQYLEEGKVVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K A Y KI+FD+ +++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPKKDPQATRYSKISFDDAMTQNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLVY
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSILKHGALKRVVMGQDEGTLVY 239
>gi|332530833|ref|ZP_08406759.1| uridylate kinase [Hylemonella gracilis ATCC 19624]
gi|332039745|gb|EGI76145.1| uridylate kinase [Hylemonella gracilis ATCC 19624]
Length = 240
Score = 287 bits (734), Expect = 3e-74, Method: Composition-based stats.
Identities = 134/222 (60%), Positives = 176/222 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ E++E+ G+E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVEEVAEVTRMGVEVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D +NK+G+ + VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNALALADTMNKAGLTARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K SA Y +++FDE I + L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPAKDKSATRYSRLSFDEAIQRNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
IMD+TAF+ CRDQKLPI+VFSI K GALKRV+ G++EGTLV
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSIFKHGALKRVVLGEDEGTLV 238
>gi|398810874|ref|ZP_10569684.1| glutathione S-transferase [Variovorax sp. CF313]
gi|398082091|gb|EJL72854.1| glutathione S-transferase [Variovorax sp. CF313]
Length = 203
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LEN K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLENRTTKGNEKALEKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|59802284|ref|YP_208996.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090]
gi|240013111|ref|ZP_04720024.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI18]
gi|254492702|ref|ZP_05105873.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291]
gi|268595749|ref|ZP_06129916.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02]
gi|268600187|ref|ZP_06134354.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11]
gi|268600288|ref|ZP_06134455.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18]
gi|268602520|ref|ZP_06136687.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1]
gi|268681069|ref|ZP_06147931.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332]
gi|268685253|ref|ZP_06152115.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679]
gi|268685549|ref|ZP_06152411.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035]
gi|291044915|ref|ZP_06570624.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2]
gi|293397988|ref|ZP_06642194.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62]
gi|75507281|sp|Q5F5F3.1|RS2_NEIG1 RecName: Full=30S ribosomal protein S2
gi|59719179|gb|AAW90584.1| putative 30S ribosomal protein S2 [Neisseria gonorrhoeae FA 1090]
gi|226511742|gb|EEH61087.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 1291]
gi|268549138|gb|EEZ44556.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae 35/02]
gi|268584318|gb|EEZ48994.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae MS11]
gi|268584419|gb|EEZ49095.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID18]
gi|268586651|gb|EEZ51327.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID1]
gi|268621353|gb|EEZ53753.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae PID332]
gi|268625537|gb|EEZ57937.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-92-679]
gi|268625833|gb|EEZ58233.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae SK-93-1035]
gi|291011809|gb|EFE03805.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae DGI2]
gi|291611934|gb|EFF41003.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae F62]
Length = 242
Score = 286 bits (733), Expect = 3e-74, Method: Composition-based stats.
Identities = 137/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|429743518|ref|ZP_19277071.1| ribosomal protein S2 [Neisseria sp. oral taxon 020 str. F0370]
gi|429165162|gb|EKY07232.1| ribosomal protein S2 [Neisseria sp. oral taxon 020 str. F0370]
Length = 242
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM YIFG RNKIHI+NLEKTL ++ +A + +L +KGT+
Sbjct: 8 QMLEAGVHFGHQTRFWNPKMEQYIFGSRNKIHIVNLEKTLPLFLEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKSAVLADADNS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R+ KL R +GGIKNM +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 128 GYSKKELLDMTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|427402233|ref|ZP_18893305.1| uridylate kinase [Massilia timonae CCUG 45783]
gi|425719006|gb|EKU81947.1| uridylate kinase [Massilia timonae CCUG 45783]
Length = 238
Score = 286 bits (732), Expect = 4e-74, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN + I+ ++++++E+ G+++A+VIGGGNI RG++ Q +DR+TAD
Sbjct: 15 GEALMGDDPFGINRATIERMVADVAEVAKLGVQVAVVIGGGNIFRGVAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + GI + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 75 YMGMLATVMNALALADAMRHVGITARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y++DP K A Y+ I+FDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGAEISAEIVLKATKVDGVYSADPKKDPHATRYENISFDEAIAKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GAL RVI G++EGTLV+
Sbjct: 195 QVMDATAFALCRDQKLPIKVFSIVKPGALTRVIMGEDEGTLVH 237
>gi|375106239|ref|ZP_09752500.1| uridylate kinase [Burkholderiales bacterium JOSHI_001]
gi|374666970|gb|EHR71755.1| uridylate kinase [Burkholderiales bacterium JOSHI_001]
Length = 236
Score = 286 bits (732), Expect = 4e-74, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I ++ E+ E+ G E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAYGINRATIVRMVQEVQEVTRLGCEVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + G+ + VMSAI+IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 73 YMGMLATVMNSLALADTMRQEGMTARVMSAINIEQVVEPYVRPKALQYLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K +A Y I+FDE I+K L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYTADPKKDPTATRYATISFDEAIAKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+++D+TAF+ CRDQKLPI+VFSI K GALKRV++G++EGTLV+
Sbjct: 193 QVLDATAFALCRDQKLPIKVFSIFKPGALKRVVQGEDEGTLVH 235
>gi|422349347|ref|ZP_16430238.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658429|gb|EKB31303.1| 30S ribosomal protein S2 [Sutterella wadsworthensis 2_1_59BFAA]
Length = 252
Score = 286 bits (732), Expect = 4e-74, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 170/223 (76%)
Query: 170 LTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGF 229
+ ++++AG HFGHQTRFWNPKM YIFG RNKIHIINLEKT+ +E+A ++ QL
Sbjct: 1 MVSMREMLEAGCHFGHQTRFWNPKMGQYIFGARNKIHIINLEKTVAKFEEACKFARQLSA 60
Query: 230 SKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFIT 289
G +LFV KR R +IA EA R G ++DQRWLGG LTNFKT++ +I+RLK+M+ +
Sbjct: 61 QGGKILFVDAKRGGREIIAAEAQRCGSCWVDQRWLGGTLTNFKTVRGTIKRLKDMEQQLE 120
Query: 290 NGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIP 349
+GS L+KKEAL F R KLN+ IGGIK M+ +PDA+FI+DVGYHK A+ EA KL IP
Sbjct: 121 DGSAANLTKKEALDFQRNVEKLNKSIGGIKEMSALPDALFIVDVGYHKIAIQEANKLGIP 180
Query: 350 IIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+IG+VDTNHSPDG++YV+PGNDDS+K++A+Y +GI DA L +
Sbjct: 181 VIGIVDTNHSPDGVDYVVPGNDDSSKAVAIYARGIADAVLAGR 223
>gi|239814210|ref|YP_002943120.1| glutathione S-transferase domain-containing protein [Variovorax
paradoxus S110]
gi|239800787|gb|ACS17854.1| Glutathione S-transferase domain protein [Variovorax paradoxus
S110]
Length = 203
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LEN K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVAALENRTAKGNEKALEKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|149928182|ref|ZP_01916427.1| uridylate kinase [Limnobacter sp. MED105]
gi|149823073|gb|EDM82313.1| uridylate kinase [Limnobacter sp. MED105]
Length = 236
Score = 286 bits (732), Expect = 4e-74, Method: Composition-based stats.
Identities = 136/223 (60%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN I+ +++E++E+ + G+ELA+VIGGGNI RGI+ +DR+TAD
Sbjct: 13 GEALMGEDSYGINRQTIERMVAEVAEVSASGVELAVVIGGGNIFRGIAPGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D ++G+ + V SA++IE+ +E YI AI+YLEEGKVVIFA G
Sbjct: 73 YMGMMATVMNALALQDAFRRAGVEARVQSALNIEQVVEPYIRPKAIRYLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDGIY +DPNK +A Y++I+F+E ISK L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGIYTADPNKDPTATRYERISFNEAISKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+TAF+ CRDQKLPIRVFSI K GAL R + G+NEGTLV+
Sbjct: 193 EVMDATAFALCRDQKLPIRVFSINKPGALHRAVAGENEGTLVH 235
>gi|145588316|ref|YP_001154913.1| glutathione S-transferase domain-containing protein
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145046722|gb|ABP33349.1| Glutathione S-transferase, N-terminal domain protein
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 203
Score = 286 bits (732), Expect = 4e-74, Method: Composition-based stats.
Identities = 131/178 (73%), Positives = 159/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VARARARLFLFNFEKELFVHVAALENEKGKAADKVHEKARLAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRL++YGI+LS++A+ L+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLEHYGIDLSRNAAALLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|344940506|ref|ZP_08779794.1| ribosomal protein S2 [Methylobacter tundripaludum SV96]
gi|344261698|gb|EGW21969.1| ribosomal protein S2 [Methylobacter tundripaludum SV96]
Length = 245
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 177/222 (79%), Gaps = 1/222 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM++Y+FG RNKIHII+LEKTL M+ A+ Y+ Q+ +KGT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMATYLFGSRNKIHIIDLEKTLPMFNDAMNYLGQMTANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI- 293
LFVGTK+ AR V+A EA R GMP+++ RWLGG+LTNFKTIK SI RLKE++ +G++
Sbjct: 68 LFVGTKKAARKVVAEEAARCGMPYVNHRWLGGMLTNFKTIKKSINRLKELEAMKADGTLY 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++ +KKEAL R+ KL R +GGIK+M +PD IFI+DVGY K A+SEA KL IP++G+
Sbjct: 128 QRFAKKEALGMERELEKLERSLGGIKDMKGVPDVIFILDVGYEKNAISEAKKLGIPVVGI 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
VD+N+SP+ I+Y+IPGNDDS +++ LY + + A ++AK+ G
Sbjct: 188 VDSNNSPEKIDYIIPGNDDSIRAVKLYCESVSAAVMEAKSAG 229
>gi|163856845|ref|YP_001631143.1| uridylate kinase [Bordetella petrii DSM 12804]
gi|163260573|emb|CAP42875.1| pyrH [Bordetella petrii]
Length = 238
Score = 286 bits (731), Expect = 5e-74, Method: Composition-based stats.
Identities = 143/236 (60%), Positives = 183/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+V+ G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVVALGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L + + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKDVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKR + G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRAVSGEDEGTLVH 237
>gi|296136577|ref|YP_003643819.1| uridylate kinase [Thiomonas intermedia K12]
gi|410694280|ref|YP_003624902.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
[Thiomonas sp. 3As]
gi|294340705|emb|CAZ89097.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
[Thiomonas sp. 3As]
gi|295796699|gb|ADG31489.1| uridylate kinase [Thiomonas intermedia K12]
Length = 236
Score = 286 bits (731), Expect = 5e-74, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN I+ ++ +I+E+V G++LAIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAYGINRVTIEAMVRDIAEVVHSGVQLAIVIGGGNIFRGVAGGAVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + +G+ VMSAI+I++ +ESY+ A++YLEEGK VIFAGG
Sbjct: 73 YMGMLATVMNSLALSDAMKHAGLNPRVMSAIAIDQVVESYVRPKALQYLEEGKSVIFAGG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALRAAE+ AE++LKATKVDGIY +DP K A Y +I+FDE I+++L
Sbjct: 133 TGNPFFTTDTAAALRAAEVGAEVMLKATKVDGIYTADPAKDPQAERYARISFDEAIARRL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CR+QK+PIRVFSI K GAL RV++G +EGT VY
Sbjct: 193 QVMDATAFALCREQKMPIRVFSIFKPGALMRVVQGADEGTDVY 235
>gi|429462802|ref|YP_007184265.1| uridylate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811453|ref|YP_007447908.1| uridylate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338316|gb|AFZ82739.1| uridylate kinase [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776611|gb|AGF47610.1| uridylate kinase [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 238
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 178/236 (75%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K Y +LK GEALM D++ IN S I NI SEIS++ GIE+AIVIGGGNI RG+
Sbjct: 4 KPYKRVLLKLS--GEALMGNDSFGINRSTISNITSEISKVFDLGIEIAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDSLKCIGVDARVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGK+VIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY+SDP K SA Y
Sbjct: 122 YLEEGKIVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSSDPKKDPSATKY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I FDEVI +++E+MD+TAF+ CRD LPI VFSI K ALKRV+ G+NEGTLV+
Sbjct: 182 SNICFDEVIVRRIEVMDATAFALCRDHNLPINVFSIYKENALKRVVSGENEGTLVH 237
>gi|319791969|ref|YP_004153609.1| glutathione s-transferase domain-containing protein [Variovorax
paradoxus EPS]
gi|315594432|gb|ADU35498.1| Glutathione S-transferase domain [Variovorax paradoxus EPS]
Length = 203
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LEN K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLENRTTKGNEKTIEKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|121610850|ref|YP_998657.1| glutathione S-transferase domain-containing protein
[Verminephrobacter eiseniae EF01-2]
gi|121555490|gb|ABM59639.1| Glutathione S-transferase, N-terminal domain [Verminephrobacter
eiseniae EF01-2]
Length = 203
Score = 286 bits (731), Expect = 6e-74, Method: Composition-based stats.
Identities = 132/178 (74%), Positives = 157/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ +LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNVLESRATKGNEKALEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|347817882|ref|ZP_08871316.1| glutathione S-transferase domain-containing protein
[Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 203
Score = 286 bits (731), Expect = 6e-74, Method: Composition-based stats.
Identities = 131/178 (73%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPY QVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDIGVMNPYAQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+++LE+ K + K +AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFMHVHVLESRATKGNEKALDKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDSFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|332531470|ref|ZP_08407374.1| glutathione s-transferase domain protein [Hylemonella gracilis ATCC
19624]
gi|332039139|gb|EGI75561.1| glutathione s-transferase domain protein [Hylemonella gracilis ATCC
19624]
Length = 203
Score = 286 bits (731), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/178 (74%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDINVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LEN K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLENRATKNNEKALEKARGHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|319793981|ref|YP_004155621.1| uridylate kinase [Variovorax paradoxus EPS]
gi|315596444|gb|ADU37510.1| uridylate kinase [Variovorax paradoxus EPS]
Length = 240
Score = 285 bits (730), Expect = 6e-74, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 180/223 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I ++ +++E+V+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDAFGINRATIVRMVQDVAEVVNMGVQVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D ++K G+++ VMSAI+IE+ +E Y+ A++YLEEGKVV+FA G
Sbjct: 77 YMGMLATVMNSLALADAMDKQGLVARVMSAIAIEQVVEPYVRPKALQYLEEGKVVVFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y++DP A Y ++FDE I+K L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAELVLKATKVDGVYSADPKLDPHATRYVSLSFDEAIAKNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+TAF+ CRDQKLPI+VFSI+KSGALKRV+ G++EGTLV+
Sbjct: 197 GIMDATAFALCRDQKLPIKVFSILKSGALKRVVMGEDEGTLVH 239
>gi|386829366|ref|ZP_10116473.1| ribosomal protein S2 [Beggiatoa alba B18LD]
gi|386430250|gb|EIJ44078.1| ribosomal protein S2 [Beggiatoa alba B18LD]
Length = 253
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 176/223 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNP+M+ YIFG RNKIHIINLE T+ +Y +A +I +L KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPQMAPYIFGARNKIHIINLEHTVRLYNEATNFIGKLAARKGNI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A+R GMP++++RWLGG+LTN+KT+K+SI+RLK+++ I++G+I
Sbjct: 67 LFVGTKRSAQEPIKEAALRCGMPYVNRRWLGGMLTNYKTVKSSIKRLKDLEAMISDGTIN 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L+KKEAL R+ KL R +GGIK+MN +PDA+F+IDVGY K A+SEA+KL IP+IGVV
Sbjct: 127 HLTKKEALSINRQVEKLERSLGGIKDMNGLPDALFVIDVGYEKIAISEAMKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
D+N SP I+YVIPGNDD+ ++I LY GI D L+++ G L
Sbjct: 187 DSNSSPLNIDYVIPGNDDAIRAIGLYANGIADVILESRQAGLL 229
>gi|161610398|ref|NP_883819.2| uridylate kinase [Bordetella parapertussis 12822]
gi|172045916|sp|Q7WA58.2|PYRH_BORPA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
Length = 238
Score = 285 bits (730), Expect = 7e-74, Method: Composition-based stats.
Identities = 142/236 (60%), Positives = 182/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGEDAFGINRSTIVRMTDEIAEVAALGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI K GALKR + G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKFGALKRAVSGEDEGTLVH 237
>gi|268597936|ref|ZP_06132103.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19]
gi|268551724|gb|EEZ46743.1| 30S ribosomal protein S2 [Neisseria gonorrhoeae FA19]
Length = 242
Score = 285 bits (730), Expect = 7e-74, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGIHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAES 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFSKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|389700008|ref|ZP_10185120.1| uridylate kinase [Leptothrix ochracea L12]
gi|388591269|gb|EIM31526.1| uridylate kinase [Leptothrix ochracea L12]
Length = 236
Score = 285 bits (730), Expect = 8e-74, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 172/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I I+ EI E+ G E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAYGINRATIVRIVREIQEVTRMGCEVAVVIGGGNIFRGVAGGAVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + G+++ VMSAI+IE+ +ESY+ A++YLEEGKVV+FA G
Sbjct: 73 YMGMLATVMNALALADTMRQEGLVARVMSAIAIEQVVESYVRPKALQYLEEGKVVVFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI A+I+LKATKVDG+Y +DP SA Y +TFDE I + L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAQIVLKATKVDGVYTADPKTDPSATRYPSLTFDEAIQRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++D+ AF+ CRDQ LPIRVFSI K GAL+RV+EG++EGTLV+
Sbjct: 193 RVLDAAAFAVCRDQNLPIRVFSIFKPGALRRVVEGEDEGTLVH 235
>gi|437999975|ref|YP_007183708.1| uridylate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451812903|ref|YP_007449356.1| uridylate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339209|gb|AFZ83631.1| uridylate kinase [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451778872|gb|AGF49752.1| uridylate kinase [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 238
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 146/236 (61%), Positives = 180/236 (76%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K Y +LK GEALM D++ IN S I I EI +++ GIELAIVIGGGNI RG+
Sbjct: 4 KPYKRVLLKLS--GEALMGDDSFGINRSTILCITKEIVKVIELGIELAIVIGGGNIFRGL 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDSLKCLGIDARVQSALNIDQVVEPYIRSKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY+SDP K +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSSDPKKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I FDEVI +++E+MD+TAF+ CRDQKLPI VFSI KS ALKRV+ G+NEGTLV+
Sbjct: 182 MRICFDEVIVRRIEVMDATAFALCRDQKLPINVFSIYKSSALKRVVIGENEGTLVH 237
>gi|444921307|ref|ZP_21241144.1| 30S ribosomal protein S2 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507666|gb|ELV07841.1| 30S ribosomal protein S2 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 251
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 169/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNP+M +YIFG R KIHIINLEKT+ ++E A+ I + G +L
Sbjct: 9 MLEAGVHFGHQTRYWNPQMKTYIFGERQKIHIINLEKTMPLFEDAMNVISSIAAKNGRVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ ++A EA RAG P++D RWLGG+LTNFKT+K SI+RL+E++ +GSI +
Sbjct: 69 FVGTKRAAQEIVAAEATRAGQPYVDHRWLGGMLTNFKTVKNSIKRLREIEAMKADGSIER 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE +L R+ KL R +GGIK+M IPDA+F+IDVGY K AV+EA K+ IP+I VVD
Sbjct: 129 LTKKEGILLTRELEKLERSLGGIKDMPSIPDALFVIDVGYEKNAVAEARKMGIPVIAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN+SP+G++YVIPGNDD+ ++I LY + DA ++ +
Sbjct: 189 TNNSPEGVDYVIPGNDDAIRAIQLYAQAAADAVIEGR 225
>gi|332284281|ref|YP_004416192.1| uridylate kinase [Pusillimonas sp. T7-7]
gi|330428234|gb|AEC19568.1| uridylate kinase [Pusillimonas sp. T7-7]
Length = 238
Score = 285 bits (729), Expect = 9e-74, Method: Composition-based stats.
Identities = 140/236 (59%), Positives = 183/236 (77%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
+ Y +LK GEALM DA+ IN + I+ + EI+E+ + G+ELAIVIGGGNI RG+
Sbjct: 4 RSYKRVLLKLS--GEALMGEDAFGINRATIQRMTEEIAEVAALGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+AT++N+LAL D L G+ + V SA+++++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATVMNALALQDALKNRGVDARVQSALNLDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DPNK A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPEATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+FDE I ++LE+MD+TAF+ CRDQKLPI+VFSI KSGALKR + G++EGTLV+
Sbjct: 182 ARISFDEAIVRRLEVMDATAFALCRDQKLPIKVFSINKSGALKRAVLGEDEGTLVH 237
>gi|393776919|ref|ZP_10365213.1| PyrH protein [Ralstonia sp. PBA]
gi|392716276|gb|EIZ03856.1| PyrH protein [Ralstonia sp. PBA]
Length = 236
Score = 285 bits (729), Expect = 9e-74, Method: Composition-based stats.
Identities = 139/223 (62%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++S+I+ IV+ G+++AIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVSDIAGIVNLGVQVAIVIGGGNIFRGMAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D L +GI V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 73 YMGMLATMMNALALQDALRHAGIEGRVQSALRMDQIVEPYIRPRAIRQLEEGRVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y +DPNK SA Y ITFDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPNKDPSATRYSTITFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|431930142|ref|YP_007243188.1| 30S ribosomal protein S2 [Thioflavicoccus mobilis 8321]
gi|431828445|gb|AGA89558.1| ribosomal protein S2 [Thioflavicoccus mobilis 8321]
Length = 244
Score = 285 bits (729), Expect = 1e-73, Method: Composition-based stats.
Identities = 127/221 (57%), Positives = 174/221 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+++IFG RNKIHI+NLEKTL +Y +A Y+ L + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMAAFIFGQRNKIHIVNLEKTLPLYREAANYLGTLVANGGKV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR + EA R GMP+++ RWLGG+LTNFKTI+ SI+RLK+++ +GSI
Sbjct: 63 LFVGTKRAAREAVREEAARCGMPYVNHRWLGGMLTNFKTIRQSIKRLKDLEAMFDDGSIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R++ KL R +GGIKNM+ +PDA+F+IDVG+ K AV+EA KL IP++GVV
Sbjct: 123 RFNKKEALDLSRERDKLERSLGGIKNMDHLPDALFVIDVGHEKIAVTEANKLGIPVVGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN+ P I+YV+PGNDD+ +++ LY +GI DA LD +T G
Sbjct: 183 DTNNDPSKIDYVVPGNDDAIRAVRLYIQGIADAVLDGRTTG 223
>gi|237749400|ref|ZP_04579880.1| stringent starvation protein A [Oxalobacter formigenes OXCC13]
gi|229380762|gb|EEO30853.1| stringent starvation protein A [Oxalobacter formigenes OXCC13]
Length = 203
Score = 285 bits (728), Expect = 1e-73, Method: Composition-based stats.
Identities = 129/178 (72%), Positives = 157/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDLFNKP+ I MNPYGQVPILVER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLFNKPEEISAMNPYGQVPILVERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML N EKE+F+H+ LEN+++ + +++AR +IRD L L+PLF K+KY+
Sbjct: 85 LMRARARLMLFNCEKELFVHVNTLENDKSDNAAANHEKARVQIRDYLTALSPLFQKSKYV 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLDYYGI LSK+A+PL+KYAER+FSRP+Y+E+LTP EK+M+
Sbjct: 145 LGDEFSMLDVALAPLLWRLDYYGIELSKTAAPLMKYAERVFSRPAYIEALTPPEKVMR 202
>gi|89901738|ref|YP_524209.1| glutathione S-transferase-like protein [Rhodoferax ferrireducens
T118]
gi|89346475|gb|ABD70678.1| glutathione S-transferase-like [Rhodoferax ferrireducens T118]
Length = 203
Score = 285 bits (728), Expect = 1e-73, Method: Composition-based stats.
Identities = 132/178 (74%), Positives = 157/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ K++ K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLESRAAKSNEKMLEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDGFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|398803839|ref|ZP_10562853.1| uridylate kinase [Polaromonas sp. CF318]
gi|398095703|gb|EJL86038.1| uridylate kinase [Polaromonas sp. CF318]
Length = 220
Score = 284 bits (727), Expect = 1e-73, Method: Composition-based stats.
Identities = 134/219 (61%), Positives = 173/219 (78%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN + I ++ EI+E+ G+E+A+VIGGGNI RG++ +DR+TADYMGM
Sbjct: 1 MGDDAFGINRATIVRMVEEIAEVTRMGVEVAVVIGGGNIFRGVAGGSVGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
LAT++N+LAL D ++K+G+I+ VMSAI IE+ +E Y+ A++YLEEGKVVIFA G GNP
Sbjct: 61 LATVMNALALGDTMDKAGLIARVMSAIGIERVVEPYVRPKALQYLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR AEI AEI+LKATKVDG+Y +DP K A Y ITFDE + K LE+MD
Sbjct: 121 FFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPKATRYTNITFDEAMGKNLEVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPI+VFSI K GALKRV++G++EGTLV+
Sbjct: 181 ATAFALCRDQKLPIKVFSIFKHGALKRVVQGEDEGTLVH 219
>gi|351730291|ref|ZP_08947982.1| glutathione S-transferase domain-containing protein [Acidovorax
radicis N35]
gi|365092403|ref|ZP_09329551.1| glutathione S-transferase domain-containing protein [Acidovorax sp.
NO-1]
gi|395006123|ref|ZP_10389961.1| glutathione S-transferase [Acidovorax sp. CF316]
gi|363415527|gb|EHL22654.1| glutathione S-transferase domain-containing protein [Acidovorax sp.
NO-1]
gi|394315873|gb|EJE52640.1| glutathione S-transferase [Acidovorax sp. CF316]
Length = 203
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/178 (74%), Positives = 157/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ +LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNILESRATKGNEKALEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|383758590|ref|YP_005437575.1| uridylate kinase PyrH [Rubrivivax gelatinosus IL144]
gi|381379259|dbj|BAL96076.1| uridylate kinase PyrH [Rubrivivax gelatinosus IL144]
Length = 236
Score = 284 bits (727), Expect = 2e-73, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN I ++ E+ EI + G ++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGEDSYGINRGTIVRMVREVQEITNLGCQVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + G+ + VMSAISIE+ +E Y+ A++YLEEGK+V+FA G
Sbjct: 73 YMGMLATVMNSLALADTMRQEGMTARVMSAISIEQVVEPYVRPKALQYLEEGKIVVFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ AE++LKATKVDG+Y++DPNK +A Y I FDE I++ L
Sbjct: 133 TGNPFFTTDTAAALRGAEVGAEVVLKATKVDGVYSADPNKDPTATRYSTIAFDEAIARNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKRV+ G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIRVFSINKPGALKRVVLGEDEGTLVH 235
>gi|237747243|ref|ZP_04577723.1| stringent starvation protein A [Oxalobacter formigenes HOxBLS]
gi|229378594|gb|EEO28685.1| stringent starvation protein A [Oxalobacter formigenes HOxBLS]
Length = 203
Score = 284 bits (727), Expect = 2e-73, Method: Composition-based stats.
Identities = 129/178 (72%), Positives = 159/178 (89%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDLFNKP+ I MNPYGQVPILVER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLFNKPEEISAMNPYGQVPILVERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
LMRARARLML N EKE+FIH+ LEN++++ ++ +++AR +IR+ L L+PLF K+KY+
Sbjct: 85 LMRARARLMLFNCEKELFIHVNTLENDKSENAVVNHEKARTQIREYLTALSPLFQKSKYV 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLDYYGI LSK+A+PL+KYAER+FSRP+Y+E+LTP EK+M+
Sbjct: 145 LGDEFSMLDVALAPLLWRLDYYGIELSKTAAPLMKYAERVFSRPAYIEALTPPEKVMR 202
>gi|241763821|ref|ZP_04761867.1| Glutathione S-transferase domain protein [Acidovorax delafieldii
2AN]
gi|407937619|ref|YP_006853260.1| glutathione S-transferase domain-containing protein [Acidovorax sp.
KKS102]
gi|241366953|gb|EER61358.1| Glutathione S-transferase domain protein [Acidovorax delafieldii
2AN]
gi|407895413|gb|AFU44622.1| glutathione S-transferase domain-containing protein [Acidovorax sp.
KKS102]
Length = 203
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/178 (74%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNTLESRATKGNEKALEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|389872084|ref|YP_006379503.1| uridylate kinase [Advenella kashmirensis WT001]
gi|388537333|gb|AFK62521.1| uridylate kinase [Advenella kashmirensis WT001]
Length = 237
Score = 284 bits (726), Expect = 2e-73, Method: Composition-based stats.
Identities = 141/238 (59%), Positives = 183/238 (76%), Gaps = 2/238 (0%)
Query: 585 IEKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICR 644
+ +Y +LK GEALM DAY IN S I + EI+E+ G+ELAIVIGGGNI R
Sbjct: 1 MSSKYKRVLLKLS--GEALMGDDAYGINRSTINRMTGEIAEVSRMGVELAIVIGGGNIFR 58
Query: 645 GISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNA 704
G++ Q +DR+TADYMGM+AT++N+LAL D L G+++ V SA++I++ +E YI A
Sbjct: 59 GVAPGAQGMDRATADYMGMMATVMNALALQDALKAHGVVTRVQSALNIDQVIEPYIRPKA 118
Query: 705 IKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAI 764
++YLEE KVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDG+Y++DPNK +A
Sbjct: 119 LRYLEEKKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYSADPNKDPTAT 178
Query: 765 IYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
Y +I+FDEVI+++LEIMD+TAF+ CRDQKLPI+VF+I K GAL R I G++EGTLV+
Sbjct: 179 RYSRISFDEVITRRLEIMDATAFALCRDQKLPIKVFNINKPGALARAICGEDEGTLVH 236
>gi|451812177|ref|YP_007448631.1| uridylate kinase [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778079|gb|AGF49027.1| uridylate kinase [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 238
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/236 (61%), Positives = 180/236 (76%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K+Y +LK GEALM D++ IN S I I EI +++ G+ELAIVIGGGNI RG+
Sbjct: 4 KQYKRVLLKLS--GEALMGDDSFGINRSTILCITEEILKVIELGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDSLKCFGIDARVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DP K +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPKKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I FDEVI +++E+MD+TAF+ CRDQKLPI VFSI KS ALKRV+ G+NEGTLV+
Sbjct: 182 MHICFDEVIVRRIEVMDATAFALCRDQKLPINVFSIYKSSALKRVVIGENEGTLVH 237
>gi|319639640|ref|ZP_07994387.1| 30S ribosomal protein S2 [Neisseria mucosa C102]
gi|317399211|gb|EFV79885.1| 30S ribosomal protein S2 [Neisseria mucosa C102]
Length = 242
Score = 284 bits (726), Expect = 2e-73, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|237745597|ref|ZP_04576077.1| uridylate kinase [Oxalobacter formigenes HOxBLS]
gi|229376948|gb|EEO27039.1| uridylate kinase [Oxalobacter formigenes HOxBLS]
Length = 238
Score = 283 bits (725), Expect = 2e-73, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 178/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN + I++++ ++ E + G+E+AIVIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGEDQFGINRASIEHMVGDVVEAANLGVEMAIVIGGGNIFRGVAPGAKGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT+INSLAL D + ++G+ + VMSAI I++ +ESY+ A++YLEEGKVV+FA G
Sbjct: 75 YMGMLATVINSLALADAMEQAGLTARVMSAIGIDQVVESYVRPKALQYLEEGKVVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ AEI+LKATKVDG+Y++DP K SA Y ITFDE I K L
Sbjct: 135 TGNPFFTTDTAAALRGAEMGAEIVLKATKVDGVYSADPMKDTSATRYSHITFDEAIEKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+ AF+ CRDQKLPI++FSI+K GALKR++ G++EGTLV+
Sbjct: 195 EVMDAAAFALCRDQKLPIKIFSILKHGALKRILLGEDEGTLVH 237
>gi|294671363|ref|ZP_06736213.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306911|gb|EFE48154.1| hypothetical protein NEIELOOT_03071 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 238
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 165/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM+ YIFG RNKIHIINLEKTL ++ +A + +L +KG +
Sbjct: 3 QMLEAGVHFGHQTRLWNPKMAQYIFGSRNKIHIINLEKTLPLFLEAQEAVRRLVANKGNI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 63 LFVGTKRQAREIIREEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKTAVLANAETS 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
SKKE L R+ KL R +GGIKNM +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 123 GYSKKELLDMTREVEKLERSLGGIKNMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SP+G+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 183 DTNNSPEGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 220
>gi|345872798|ref|ZP_08824726.1| ribosomal protein S2 [Thiorhodococcus drewsii AZ1]
gi|343917989|gb|EGV28762.1| ribosomal protein S2 [Thiorhodococcus drewsii AZ1]
Length = 248
Score = 283 bits (725), Expect = 3e-73, Method: Composition-based stats.
Identities = 128/243 (52%), Positives = 184/243 (75%), Gaps = 1/243 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+++IFGHRNKIHI+NLEKTL +Y++A+ ++ + + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMATFIFGHRNKIHIVNLEKTLPLYQEAVNFMGTMTANGGKI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I EA R GMP+++ RWLGG+LTNFKTI+ S++RLKE++ +G+I
Sbjct: 63 LFVGTKRAARDAIKEEAARCGMPYVNHRWLGGMLTNFKTIRQSVKRLKELEAMFESGTIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R++ KL + +GGIK+M+ +PDA+F+IDVG+ K AV+EA KL IP+IGVV
Sbjct: 123 RFNKKEALGLSRERAKLEQSMGGIKDMDGLPDAMFVIDVGHEKIAVTEANKLGIPVIGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
DTN+ P ++YVIPGNDD+ +++ LY G DA LD + + A ++E A+ E
Sbjct: 183 DTNNDPSSVDYVIPGNDDAIRAVRLYISGAADAILDGRNTAAAMAGRTADVIE-SAAVEE 241
Query: 415 ANG 417
A+G
Sbjct: 242 ADG 244
>gi|255067272|ref|ZP_05319127.1| ribosomal protein S2 [Neisseria sicca ATCC 29256]
gi|340361166|ref|ZP_08683603.1| 30S ribosomal protein S2 [Neisseria macacae ATCC 33926]
gi|349608687|ref|ZP_08888110.1| 30S ribosomal protein S2 [Neisseria sp. GT4A_CT1]
gi|419796916|ref|ZP_14322428.1| ribosomal protein S2 [Neisseria sicca VK64]
gi|255048423|gb|EET43887.1| ribosomal protein S2 [Neisseria sicca ATCC 29256]
gi|339889001|gb|EGQ78414.1| 30S ribosomal protein S2 [Neisseria macacae ATCC 33926]
gi|348611544|gb|EGY61188.1| 30S ribosomal protein S2 [Neisseria sp. GT4A_CT1]
gi|385698977|gb|EIG29302.1| ribosomal protein S2 [Neisseria sicca VK64]
Length = 242
Score = 283 bits (724), Expect = 4e-73, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 169/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLEKTL M+++A + +L +KGT+
Sbjct: 8 QMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLEKTLPMFQEAQEAVRRLVANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMPF+D RWLGG+LTN+KT+K SI+RL+E + N +
Sbjct: 68 LFVGTKRQAREIIREEATRAGMPFVDHRWLGGMLTNYKTVKQSIKRLEEKTAALENAAEG 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R KL R +GGIKNM +PDAIF+ID GY KG + EA KL IP+I VV
Sbjct: 128 GFNKKEILEMQRDVEKLERSLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKYVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|319943824|ref|ZP_08018105.1| UMP kinase [Lautropia mirabilis ATCC 51599]
gi|319743057|gb|EFV95463.1| UMP kinase [Lautropia mirabilis ATCC 51599]
Length = 251
Score = 283 bits (723), Expect = 4e-73, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN I+ + +++E+ G+ELA+VIGGGNI RG+S+ +DR+TAD
Sbjct: 28 GEALMGSDSYGINRQTIEQMCQQVAEVNRLGVELAVVIGGGNIFRGVSSGAAGMDRATAD 87
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D L ++G+ + V SA++IE+ +E YI A++YLEEGKVVIFA G
Sbjct: 88 YMGMLATVMNALALQDALRQTGVEARVQSALNIEQIVEPYIRPKALRYLEEGKVVIFAAG 147
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE+ILKATKVDG+Y +DP K SA Y++ITFDE I + L
Sbjct: 148 TGNPFFTTDTAAALRGAEINAELILKATKVDGVYTADPVKDPSATRYREITFDEAIMRNL 207
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+ AF+ CRDQKLP++VFSI K+GAL RV+ G++EGTLV+
Sbjct: 208 KVMDAAAFALCRDQKLPLKVFSIFKTGALTRVVCGEDEGTLVH 250
>gi|415953989|ref|ZP_11557317.1| Uridylate kinase [Herbaspirillum frisingense GSF30]
gi|407757193|gb|EKF67229.1| Uridylate kinase [Herbaspirillum frisingense GSF30]
Length = 220
Score = 283 bits (723), Expect = 5e-73, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 175/219 (79%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DAY IN + I+ ++++++EI G+ELAIVIGGGNI RG++ Q +DR+TADYMGM
Sbjct: 1 MGDDAYGINRATIERMVADVAEISKLGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
LAT++NSLAL D + ++G+ + VMSAI IE+ +E Y+ A++YLEEGK+V+FA G GNP
Sbjct: 61 LATVMNSLALADAMRQAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKIVVFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR +EI A+I+LKATKVDG+Y +DP K +A Y+ I+FDE I+K L++MD
Sbjct: 121 FFTTDTAAALRGSEIGAQIVLKATKVDGVYTADPKKDPAATRYQSISFDEAIAKHLQVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPI+VFSI+K GALK V+ G +EGTLV+
Sbjct: 181 ATAFALCRDQKLPIKVFSIVKPGALKSVVMGDDEGTLVH 219
>gi|171059529|ref|YP_001791878.1| uridylate kinase [Leptothrix cholodnii SP-6]
gi|170776974|gb|ACB35113.1| uridylate kinase [Leptothrix cholodnii SP-6]
Length = 236
Score = 283 bits (723), Expect = 5e-73, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I ++ EI E+ G E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAYGINRATIVRMVREIQEVTQLGCEVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + G+ + VMSAISI++ +E Y+ A++YLEEGKVV+FAGG
Sbjct: 73 YMGMLATVMNALALADTMRQEGMTARVMSAISIDQVVEPYVRPKALQYLEEGKVVVFAGG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ A+I+LKATKVDG+Y +DP K SA Y +TFDE I K L
Sbjct: 133 TGNPFFTTDTAAALRGAEMGAQIMLKATKVDGVYTADPKKDPSATRYPTLTFDEAIIKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+++D+TAF+ CRDQKLP++VFSI K GALKRV+ G +EGTLV+
Sbjct: 193 QVLDATAFALCRDQKLPLKVFSIFKPGALKRVVMGGDEGTLVH 235
>gi|332527872|ref|ZP_08403909.1| uridylate kinase [Rubrivivax benzoatilyticus JA2]
gi|332112449|gb|EGJ12242.1| uridylate kinase [Rubrivivax benzoatilyticus JA2]
Length = 236
Score = 283 bits (723), Expect = 5e-73, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN I ++ E+ EI S G ++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGEDSYGINRGTIVRMVREVQEITSLGCQVAVVIGGGNIFRGVAGGSVGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D + + G+ + VMSAISIE+ +E Y+ A++YLEE K+V+FA G
Sbjct: 73 YMGMLATVMNSLALADTMRQEGMTARVMSAISIEQVVEPYVRPKALQYLEEDKIVVFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y++DPNK +A Y I FDE I++ L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYSADPNKDPTATRYSTIGFDEAIARNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKRV+ G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIRVFSINKPGALKRVVLGEDEGTLVH 235
>gi|171462950|ref|YP_001797063.1| glutathione S-transferase domain [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192488|gb|ACB43449.1| Glutathione S-transferase domain [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 203
Score = 283 bits (723), Expect = 5e-73, Method: Composition-based stats.
Identities = 130/178 (73%), Positives = 158/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPY QVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFNKPEDISVMNPYDQVPILVERDLILYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RARARL L NFEKE+F+H+ LENE+ K + K +++AR IRDRL LAP+F+KNKYM
Sbjct: 85 VARARARLFLFNFEKELFVHVVALENEKGKAAEKVHEKARLAIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRL++YGI+LS++A+ L+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLEHYGIDLSRNAAALLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|406979926|gb|EKE01616.1| hypothetical protein ACD_21C00090G0022 [uncultured bacterium]
Length = 329
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 172/218 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ RFWNPKM+ YIFG ++KIHIINLEKTL MY++A+ ++ + +G +
Sbjct: 8 QMLEAGVHFGHQVRFWNPKMAPYIFGTKSKIHIINLEKTLDMYQQAVNFLSSVAAKRGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QAR +I +EA R MP++D RWLGG+LTN+KTI+ S++RLKE++ +
Sbjct: 68 LFVGTKQQARSLIRSEAERCRMPYVDFRWLGGMLTNYKTIRQSLKRLKELEALRDGPTFA 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKEAL R+ KL R +GGI+ M +PDA+F+IDVG+ AVSEA KL IPI+G+V
Sbjct: 128 RITKKEALSIMREITKLERGLGGIREMGGLPDAVFVIDVGHENIAVSEATKLKIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ PDGI+YVIPGNDDS ++I LY +GIVDA +DA+
Sbjct: 188 DTNNKPDGIDYVIPGNDDSIRAIKLYLQGIVDAIIDAR 225
>gi|120612337|ref|YP_972015.1| glutathione S-transferase domain-containing protein [Acidovorax
citrulli AAC00-1]
gi|326318402|ref|YP_004236074.1| glutathione S-transferase domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|120590801|gb|ABM34241.1| glutathione S-transferase, N-terminal domain protein [Acidovorax
citrulli AAC00-1]
gi|323375238|gb|ADX47507.1| Glutathione S-transferase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 203
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ +LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNVLESRATKGNEKALEKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWRLDYYGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGENFSMLDVAIAPLLWRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|344342428|ref|ZP_08773299.1| ribosomal protein S2 [Marichromatium purpuratum 984]
gi|343805764|gb|EGV23659.1| ribosomal protein S2 [Marichromatium purpuratum 984]
Length = 243
Score = 282 bits (722), Expect = 6e-73, Method: Composition-based stats.
Identities = 125/218 (57%), Positives = 173/218 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFGHRNKIHIINLEKTL +YE+A+ ++ L + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMAPFIFGHRNKIHIINLEKTLPLYEEAVNFMGSLAANGGKI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR V+ EA R GMP+++ RWLGG+LTNFKTI+ S++RLKE++ +G+I
Sbjct: 63 LFVGTKRAARDVLKEEAARCGMPYVNHRWLGGMLTNFKTIRQSVKRLKELEAMFEDGTIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R++ KL + IGGIKNM+ +PDA+F++DVG+ K AV+EA KL IP+IGVV
Sbjct: 123 RFNKKEALGLSRERDKLEQSIGGIKNMDGLPDAMFVVDVGHEKNAVNEANKLGIPVIGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P +++VIPGNDD+ +++ LY G DA LD +
Sbjct: 183 DTNNEPSTVDFVIPGNDDALRAVRLYITGAADAILDGR 220
>gi|237747787|ref|ZP_04578267.1| uridylate kinase [Oxalobacter formigenes OXCC13]
gi|229379149|gb|EEO29240.1| uridylate kinase [Oxalobacter formigenes OXCC13]
Length = 238
Score = 282 bits (722), Expect = 7e-73, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN + I++++ ++ + G+E+AIVIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGEDQFGINRASIEHMVEDVVDAAKLGVEMAIVIGGGNIFRGVAPGAKGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT+INSLAL D + ++G+ + VMSAI I++ +ESY+ A++YLEEGKVV+FA G
Sbjct: 75 YMGMLATVINSLALADAMEQAGLTARVMSAIGIDQVVESYVRPKALQYLEEGKVVVFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ AEI+LKATKVDG+Y++DP K SA Y ITFDE I K L
Sbjct: 135 TGNPFFTTDTAAALRGAEMGAEIVLKATKVDGVYSADPMKDASASRYSHITFDEAIEKHL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+ AF+ CRDQKLPI++FSI+K GALKRV+ G++EGTLV+
Sbjct: 195 EVMDAAAFALCRDQKLPIKIFSILKHGALKRVLLGEDEGTLVH 237
>gi|153875861|ref|ZP_02003471.1| Ribosomal protein S2 [Beggiatoa sp. PS]
gi|152067675|gb|EDN66529.1| Ribosomal protein S2 [Beggiatoa sp. PS]
Length = 260
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 173/218 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHIINLE +L MY A ++ +L KG +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMGPYIFGERNKIHIINLEHSLPMYNDAGNFLGKLAARKGAI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ + A+R GMP++++RWLGG+LTN+KT+K SI+RLK++++ +G++
Sbjct: 63 LFVGTKRAAQDPVKEAALRCGMPYVNRRWLGGMLTNYKTVKASIKRLKDLEILTQDGTLH 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKEAL R+ KL R +GGIK+MN++PDA+FIIDVGY K AV EA+KL IP++GVV
Sbjct: 123 RITKKEALSLTRELAKLERSLGGIKDMNVLPDALFIIDVGYEKIAVQEAVKLGIPVVGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y+IPGNDD+ ++I LY G+ D ++++
Sbjct: 183 DTNNNPENVDYIIPGNDDAIRAITLYVNGMADTIIESR 220
>gi|121603627|ref|YP_980956.1| glutathione S-transferase domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120592596|gb|ABM36035.1| Glutathione S-transferase, N-terminal domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 203
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 157/178 (88%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDINVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ +K + K +++R IRDRL LAP+FLKNK+M
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSALESRASKGNEKALEKSRAHIRDRLTQLAPIFLKNKFM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDSFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|33591510|ref|NP_879154.1| stringent starvation protein A [Bordetella pertussis Tohama I]
gi|33598772|ref|NP_886415.1| stringent starvation protein A [Bordetella parapertussis 12822]
gi|33603846|ref|NP_891406.1| stringent starvation protein A [Bordetella bronchiseptica RB50]
gi|384202789|ref|YP_005588528.1| stringent starvation protein A [Bordetella pertussis CS]
gi|408417189|ref|YP_006627896.1| stringent starvation protein A [Bordetella pertussis 18323]
gi|410422311|ref|YP_006902760.1| stringent starvation protein A [Bordetella bronchiseptica MO149]
gi|410474854|ref|YP_006898135.1| stringent starvation protein A [Bordetella parapertussis Bpp5]
gi|412340841|ref|YP_006969596.1| stringent starvation protein A [Bordetella bronchiseptica 253]
gi|427816856|ref|ZP_18983920.1| stringent starvation protein A [Bordetella bronchiseptica 1289]
gi|427817171|ref|ZP_18984234.1| stringent starvation protein A [Bordetella bronchiseptica D445]
gi|427822915|ref|ZP_18989977.1| stringent starvation protein A [Bordetella bronchiseptica Bbr77]
gi|33571152|emb|CAE40653.1| stringent starvation protein A [Bordetella pertussis Tohama I]
gi|33574902|emb|CAE39565.1| stringent starvation protein A [Bordetella parapertussis]
gi|33577971|emb|CAE35236.1| stringent starvation protein A [Bordetella bronchiseptica RB50]
gi|332380903|gb|AEE65750.1| stringent starvation protein A [Bordetella pertussis CS]
gi|401779359|emb|CCJ64878.1| stringent starvation protein A [Bordetella pertussis 18323]
gi|408444964|emb|CCJ51752.1| stringent starvation protein A [Bordetella parapertussis Bpp5]
gi|408449606|emb|CCJ61298.1| stringent starvation protein A [Bordetella bronchiseptica MO149]
gi|408770675|emb|CCJ55471.1| stringent starvation protein A [Bordetella bronchiseptica 253]
gi|410567856|emb|CCN25428.1| stringent starvation protein A [Bordetella bronchiseptica 1289]
gi|410568171|emb|CCN16199.1| stringent starvation protein A [Bordetella bronchiseptica D445]
gi|410588180|emb|CCN03237.1| stringent starvation protein A [Bordetella bronchiseptica Bbr77]
Length = 203
Score = 282 bits (721), Expect = 9e-73, Method: Composition-based stats.
Identities = 129/178 (72%), Positives = 153/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K +AR+ IRDRL LAP+ LKNKYM
Sbjct: 85 VMRARTRLFLYNFEKELFVHVCALEDRSAKPDDKKMVQARQSIRDRLAQLAPMLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|260220276|emb|CBA27652.1| Stringent starvation protein A [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 203
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE +K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNTLEARASKGNEKALEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGENFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|451936423|ref|YP_007460277.1| uridylate kinase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777346|gb|AGF48321.1| uridylate kinase [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 238
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 180/236 (76%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K Y +LK GEALM D++ IN S I I EI +++ G+ELAIVIGGGNI RG+
Sbjct: 4 KPYKRVLLKLS--GEALMGDDSFGINRSTILCITEEILKVIELGVELAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L + G+ + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDSLKRFGVDARVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGKVVIFA G GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DP K +A Y
Sbjct: 122 YLEEGKVVIFAAGTGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPKKDPTATRY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I FDEVI +++E+MD+TAF+ CR QKLPI VFSI KS ALKRV+ G+NEGTLV+
Sbjct: 182 MRICFDEVIVRRIEVMDATAFALCRYQKLPINVFSIYKSSALKRVVIGENEGTLVH 237
>gi|402566200|ref|YP_006615545.1| uridylate kinase [Burkholderia cepacia GG4]
gi|402247397|gb|AFQ47851.1| uridylate kinase [Burkholderia cepacia GG4]
Length = 237
Score = 281 bits (720), Expect = 1e-72, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVGLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI++ V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIVARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y ITFDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTITFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 236
>gi|404378238|ref|ZP_10983334.1| 30S ribosomal protein S2 [Simonsiella muelleri ATCC 29453]
gi|294484108|gb|EFG31791.1| 30S ribosomal protein S2 [Simonsiella muelleri ATCC 29453]
Length = 242
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/226 (57%), Positives = 169/226 (74%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S ++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ ++++A + +
Sbjct: 1 MSSQITMRQMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQDVVRR 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L +KGT+LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E
Sbjct: 61 LVANKGTVLFVGTKRQARDIIKEEAERAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKST 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+ N +KKE L R+ KL R +GGIK+M +PDAIF+ID GY G + EA KL
Sbjct: 121 VLANAEASGYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IP+I VVD+N+SPD + +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 181 GIPVIAVVDSNNSPDLVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 226
>gi|91784117|ref|YP_559323.1| uridylate kinase [Burkholderia xenovorans LB400]
gi|123062777|sp|Q13XB8.1|PYRH_BURXL RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|91688071|gb|ABE31271.1| uridylate kinase [Burkholderia xenovorans LB400]
Length = 237
Score = 281 bits (720), Expect = 1e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGEDEGTLVH 236
>gi|319761622|ref|YP_004125559.1| glutathione s-transferase domain-containing protein [Alicycliphilus
denitrificans BC]
gi|330823488|ref|YP_004386791.1| glutathione S-transferase domain-containing protein [Alicycliphilus
denitrificans K601]
gi|317116183|gb|ADU98671.1| Glutathione S-transferase domain protein [Alicycliphilus
denitrificans BC]
gi|329308860|gb|AEB83275.1| Glutathione S-transferase domain protein [Alicycliphilus
denitrificans K601]
Length = 203
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 155/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNTLESRATKGNEKALEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWRLDYYGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEGFSMLDVAIAPLLWRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|186476094|ref|YP_001857564.1| uridylate kinase [Burkholderia phymatum STM815]
gi|184192553|gb|ACC70518.1| uridylate kinase [Burkholderia phymatum STM815]
Length = 237
Score = 281 bits (720), Expect = 1e-72, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGEDEGTLVH 236
>gi|260220937|emb|CBA29005.1| Uridylate kinase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 240
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D + IN I ++ EI+E+ G+E+A+VIGGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDQFGINRDTIVRMVDEIAEVTRLGVEVAVVIGGGNIFRGVAGGSVGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D +NK+G+ + VMSAI IE+ +E Y+ A++YLEEGKVVIFA G
Sbjct: 77 YMGMLATVMNALALGDTMNKAGLTARVMSAIGIEQVVEPYVRPKALQYLEEGKVVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y +DP K SA Y KITF++ +++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEMVLKATKVDGVYTADPKKDPSATRYSKITFNDAMTQNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
IMD+ AF+ CRDQKLPI+VFSI K GALKRV+ G++EGTLV+
Sbjct: 197 GIMDAAAFALCRDQKLPIKVFSIFKHGALKRVVMGEDEGTLVH 239
>gi|121593216|ref|YP_985112.1| glutathione S-transferase domain-containing protein [Acidovorax sp.
JS42]
gi|222109970|ref|YP_002552234.1| glutathione s-transferase domain-containing protein [Acidovorax
ebreus TPSY]
gi|120605296|gb|ABM41036.1| Glutathione S-transferase, N-terminal domain protein [Acidovorax
sp. JS42]
gi|221729414|gb|ACM32234.1| Glutathione S-transferase domain protein [Acidovorax ebreus TPSY]
Length = 203
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 155/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVNALESRATKGNEKALEKARTHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWRLDYYGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEGFSMLDVAIAPLLWRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|296136634|ref|YP_003643876.1| glutathione S-transferase [Thiomonas intermedia K12]
gi|410694339|ref|YP_003624961.1| SspA protein [Thiomonas sp. 3As]
gi|294340764|emb|CAZ89156.1| SspA protein [Thiomonas sp. 3As]
gi|295796756|gb|ADG31546.1| Glutathione S-transferase domain protein [Thiomonas intermedia K12]
Length = 203
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 129/178 (72%), Positives = 153/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP+++ MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFNKPEDVSVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F+H+ LE+ K++ K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VARARVRLFLFNFEKELFVHVTTLESRATKSNEKALEKARSAIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSMLDV IAPLLWRLD+YGI+L KSA PL KYAERIF RP+Y+E+LTP+EKIM+
Sbjct: 145 LGEDFSMLDVAIAPLLWRLDHYGIDLPKSALPLAKYAERIFQRPAYIEALTPSEKIMR 202
>gi|385209107|ref|ZP_10035975.1| uridylate kinase [Burkholderia sp. Ch1-1]
gi|385181445|gb|EIF30721.1| uridylate kinase [Burkholderia sp. Ch1-1]
Length = 237
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGEDEGTLVH 236
>gi|187924431|ref|YP_001896073.1| uridylate kinase [Burkholderia phytofirmans PsJN]
gi|187715625|gb|ACD16849.1| uridylate kinase [Burkholderia phytofirmans PsJN]
Length = 237
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G +EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGDDEGTLVH 236
>gi|114321014|ref|YP_742697.1| 30S ribosomal protein S2 [Alkalilimnicola ehrlichii MLHE-1]
gi|122311392|sp|Q0A7I0.1|RS2_ALHEH RecName: Full=30S ribosomal protein S2
gi|114227408|gb|ABI57207.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1]
Length = 248
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 127/218 (58%), Positives = 169/218 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL +Y++A+ Y+ +L G +L
Sbjct: 9 MLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTLPLYQEAMNYVGRLAAEGGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR AR + EA R GMP++D RWLGG+LTNF+T+K SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRSARKAVREEASRCGMPYVDHRWLGGMLTNFRTVKGSIRRLKDLEAQAEDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KLNR + GIK+MN +PDA+F+IDVG+ AV EA KL IP++ VVD
Sbjct: 129 LTKREALSLSREMEKLNRTLSGIKDMNGLPDAMFVIDVGFEHIAVQEARKLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN+SP ++YVIPGNDD+ ++I LY G DA L+AKT
Sbjct: 189 TNNSPREVDYVIPGNDDAIRAIQLYLSGAADAVLEAKT 226
>gi|335419071|ref|ZP_08550129.1| 30S ribosomal protein S2 [Salinisphaera shabanensis E1L3A]
gi|334897206|gb|EGM35342.1| 30S ribosomal protein S2 [Salinisphaera shabanensis E1L3A]
Length = 304
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 129/218 (59%), Positives = 171/218 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGH+TR+WNPKM+ YIFGHRNKIHIINLE+TL +++ A YI +L + G +
Sbjct: 8 QLLEAGVHFGHRTRYWNPKMAPYIFGHRNKIHIINLEETLPLFKDAYNYISRLSANGGNV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR AR + +A R GMPF++ RWLGG+LTNFKT+K SIQRL +++ I +GSIR
Sbjct: 68 MFVGTKRAAREAVGKQAQRCGMPFVNHRWLGGMLTNFKTVKNSIQRLHDLEQMIEDGSIR 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+K+EAL YR++ KL R IGGIK M +PDA+FIIDVG+ K AV EA KL IP+I VV
Sbjct: 128 KLNKREALDLYRERDKLERGIGGIKEMTSLPDALFIIDVGFEKIAVDEARKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN SP+ I+ VIPGNDD+ ++I +YT+ + DA L +
Sbjct: 188 DTNCSPENIDVVIPGNDDAIRAIRIYTEMVADAVLTGR 225
>gi|337278474|ref|YP_004617945.1| Stringent starvation protein A [Ramlibacter tataouinensis TTB310]
gi|334729550|gb|AEG91926.1| Candidate Stringent starvation protein A [Ramlibacter tataouinensis
TTB310]
Length = 203
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 155/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLESRAAKGNEKALEKARSHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWR+DYYGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGENFSMLDVAIAPLLWRMDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|374370895|ref|ZP_09628885.1| uridylate kinase [Cupriavidus basilensis OR16]
gi|373097558|gb|EHP38689.1| uridylate kinase [Cupriavidus basilensis OR16]
Length = 236
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDIAEIVRLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I+ V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHADIVGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|209518710|ref|ZP_03267526.1| uridylate kinase [Burkholderia sp. H160]
gi|209500824|gb|EEA00864.1| uridylate kinase [Burkholderia sp. H160]
Length = 237
Score = 281 bits (719), Expect = 1e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYSTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G +EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGDDEGTLVH 236
>gi|390571410|ref|ZP_10251653.1| uridylate kinase [Burkholderia terrae BS001]
gi|420254934|ref|ZP_14757900.1| uridylate kinase [Burkholderia sp. BT03]
gi|389936647|gb|EIM98532.1| uridylate kinase [Burkholderia terrae BS001]
gi|398047271|gb|EJL39822.1| uridylate kinase [Burkholderia sp. BT03]
Length = 237
Score = 281 bits (718), Expect = 2e-72, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADMAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVQGEDEGTLVH 236
>gi|163854423|ref|YP_001628721.1| stringent starvation protein A [Bordetella petrii DSM 12804]
gi|163258151|emb|CAP40450.1| stringent starvation protein A [Bordetella petrii]
Length = 203
Score = 281 bits (718), Expect = 2e-72, Method: Composition-based stats.
Identities = 130/178 (73%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K AR+ IRDRL LAPL LKNKYM
Sbjct: 85 VMRARTRLFLYNFEKELFVHVSTLEDRSAKPDEKKLATARQNIRDRLAQLAPLLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|410420301|ref|YP_006900750.1| uridylate kinase [Bordetella bronchiseptica MO149]
gi|410473059|ref|YP_006896340.1| uridylate kinase [Bordetella parapertussis Bpp5]
gi|412337753|ref|YP_006966508.1| uridylate kinase [Bordetella bronchiseptica 253]
gi|427814778|ref|ZP_18981842.1| uridylate kinase [Bordetella bronchiseptica 1289]
gi|427819115|ref|ZP_18986178.1| uridylate kinase [Bordetella bronchiseptica D445]
gi|427822231|ref|ZP_18989293.1| uridylate kinase [Bordetella bronchiseptica Bbr77]
gi|33576020|emb|CAE33100.1| uridylate kinase [Bordetella bronchiseptica RB50]
gi|408443169|emb|CCJ49773.1| uridylate kinase [Bordetella parapertussis Bpp5]
gi|408447596|emb|CCJ59272.1| uridylate kinase [Bordetella bronchiseptica MO149]
gi|408767587|emb|CCJ52341.1| uridylate kinase [Bordetella bronchiseptica 253]
gi|410565778|emb|CCN23336.1| uridylate kinase [Bordetella bronchiseptica 1289]
gi|410570115|emb|CCN18262.1| uridylate kinase [Bordetella bronchiseptica D445]
gi|410587496|emb|CCN02539.1| uridylate kinase [Bordetella bronchiseptica Bbr77]
Length = 220
Score = 280 bits (717), Expect = 2e-72, Method: Composition-based stats.
Identities = 136/219 (62%), Positives = 174/219 (79%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG++ Q +DR+TADYMGM
Sbjct: 1 MGEDAFGINRSTIVRMTDEIAEVAALGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
+ATI+N+LAL D L G+ + V SA++I++ +E YI A++YLEEGKVVIFA G GNP
Sbjct: 61 MATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALRYLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y +I+FDE I ++LE+MD
Sbjct: 121 FFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRYARISFDEAIVRRLEVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPI+VFSI KSGALKR + G++EGTLV+
Sbjct: 181 ATAFALCRDQKLPIKVFSINKSGALKRAVSGEDEGTLVH 219
>gi|134296026|ref|YP_001119761.1| uridylate kinase [Burkholderia vietnamiensis G4]
gi|387902554|ref|YP_006332893.1| uridylate kinase [Burkholderia sp. KJ006]
gi|172044366|sp|A4JF73.1|PYRH_BURVG RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|134139183|gb|ABO54926.1| uridylate kinase [Burkholderia vietnamiensis G4]
gi|387577446|gb|AFJ86162.1| Uridylate kinase [Burkholderia sp. KJ006]
Length = 237
Score = 280 bits (717), Expect = 3e-72, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVGLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI++ V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIVARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 236
>gi|115352101|ref|YP_773940.1| uridylate kinase [Burkholderia ambifaria AMMD]
gi|170699875|ref|ZP_02890905.1| uridylate kinase [Burkholderia ambifaria IOP40-10]
gi|171318104|ref|ZP_02907273.1| uridylate kinase [Burkholderia ambifaria MEX-5]
gi|172060965|ref|YP_001808617.1| uridylate kinase [Burkholderia ambifaria MC40-6]
gi|122322842|sp|Q0BE17.1|PYRH_BURCM RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|115282089|gb|ABI87606.1| uridylate kinase [Burkholderia ambifaria AMMD]
gi|170135197|gb|EDT03495.1| uridylate kinase [Burkholderia ambifaria IOP40-10]
gi|171096728|gb|EDT41613.1| uridylate kinase [Burkholderia ambifaria MEX-5]
gi|171993482|gb|ACB64401.1| uridylate kinase [Burkholderia ambifaria MC40-6]
Length = 237
Score = 280 bits (717), Expect = 3e-72, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVGLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI++ V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIVARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYATISFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 236
>gi|378824170|ref|ZP_09846705.1| ribosomal protein S2 [Sutterella parvirubra YIT 11816]
gi|378597000|gb|EHY30353.1| ribosomal protein S2 [Sutterella parvirubra YIT 11816]
Length = 249
Score = 280 bits (716), Expect = 3e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 169/223 (75%)
Query: 170 LTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGF 229
+ ++++AG HFGHQTRFWNPKM +IFG RNKIHIINLEKT+ +E+A ++ QL
Sbjct: 1 MVSMREMLEAGCHFGHQTRFWNPKMEQFIFGARNKIHIINLEKTVEKFEEACKFARQLSS 60
Query: 230 SKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFIT 289
G +LFV KR R +IA EA RAG ++DQRWLGG LTNFKT++ +I+RLK+M+ +
Sbjct: 61 QGGRILFVDAKRGGREIIAAEAQRAGCCWVDQRWLGGTLTNFKTVRGTIKRLKDMEQQLA 120
Query: 290 NGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIP 349
+GS L+KKEAL F R KLN+ IGGIK MN +PDA+F++DVG+HK A+ EA KL IP
Sbjct: 121 DGSAANLTKKEALDFARNVEKLNKSIGGIKEMNGLPDALFVVDVGFHKIAIQEANKLGIP 180
Query: 350 IIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+IGVVDTN SP+G++YVIPGNDDSAK++A+Y GI DA L +
Sbjct: 181 VIGVVDTNCSPEGVDYVIPGNDDSAKAVAIYAAGIADAVLAGR 223
>gi|388566358|ref|ZP_10152803.1| glutathione s-transferase domain-containing protein [Hydrogenophaga
sp. PBC]
gi|388266372|gb|EIK91917.1| glutathione s-transferase domain-containing protein [Hydrogenophaga
sp. PBC]
Length = 203
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F H+ +LE+ +K + K ++AR IRDRL LAP+F+KNK+M
Sbjct: 85 VDRARVRLFLLNFEKELFTHVSVLESRSSKGNDKALEKARSHIRDRLTQLAPVFMKNKFM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLD+YGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDFYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|91786726|ref|YP_547678.1| glutathione S-transferase-like protein [Polaromonas sp. JS666]
gi|398804389|ref|ZP_10563384.1| glutathione S-transferase [Polaromonas sp. CF318]
gi|91695951|gb|ABE42780.1| glutathione S-transferase-like protein [Polaromonas sp. JS666]
gi|398094108|gb|EJL84479.1| glutathione S-transferase [Polaromonas sp. CF318]
Length = 203
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 156/178 (87%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYNKPEDINVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE+ +K + K ++AR IRDRL LAP+FLKNK+M
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLESRASKGNEKALEKARSHIRDRLTQLAPIFLKNKFM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD FSMLDV IAPLLWRLDYY I+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDNFSMLDVAIAPLLWRLDYYDIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|187478230|ref|YP_786254.1| uridylate kinase [Bordetella avium 197N]
gi|115422816|emb|CAJ49344.1| uridylate kinase [Bordetella avium 197N]
Length = 220
Score = 280 bits (716), Expect = 3e-72, Method: Composition-based stats.
Identities = 136/219 (62%), Positives = 174/219 (79%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG++ Q +DR+TADYMGM
Sbjct: 1 MGDDAFGINRSTIVRMTDEIAEVAAMGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
+ATI+N+LAL D L G+ + V SA++I++ +E YI ++YLEEGKVVIFA G GNP
Sbjct: 61 MATIMNALALQDALKHKGLDTRVQSALNIDQVVEPYIRPKTLRYLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y +I+FDE I ++LE+MD
Sbjct: 121 FFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRYARISFDEAIVRRLEVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPI+VFSI KSGALKRV+ G++EGTLV+
Sbjct: 181 ATAFALCRDQKLPIKVFSINKSGALKRVVGGEDEGTLVH 219
>gi|121599521|ref|YP_993370.1| uridylate kinase [Burkholderia mallei SAVP1]
gi|238562453|ref|ZP_00440477.2| UMP kinase [Burkholderia mallei GB8 horse 4]
gi|251767203|ref|ZP_02266363.2| UMP kinase [Burkholderia mallei PRL-20]
gi|254200145|ref|ZP_04906511.1| uridylate kinase [Burkholderia mallei FMH]
gi|254206483|ref|ZP_04912835.1| uridylate kinase [Burkholderia mallei JHU]
gi|121228331|gb|ABM50849.1| uridylate kinase [Burkholderia mallei SAVP1]
gi|147749741|gb|EDK56815.1| uridylate kinase [Burkholderia mallei FMH]
gi|147753926|gb|EDK60991.1| uridylate kinase [Burkholderia mallei JHU]
gi|238522670|gb|EEP86113.1| UMP kinase [Burkholderia mallei GB8 horse 4]
gi|243063482|gb|EES45668.1| UMP kinase [Burkholderia mallei PRL-20]
Length = 286
Score = 280 bits (716), Expect = 3e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 63 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 122
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 123 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 182
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 183 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNL 242
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 243 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 285
>gi|83652799|gb|ABC36862.1| uridylate kinase [Burkholderia thailandensis E264]
Length = 286
Score = 280 bits (716), Expect = 3e-72, Method: Composition-based stats.
Identities = 133/239 (55%), Positives = 182/239 (76%), Gaps = 2/239 (0%)
Query: 584 IIEKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNIC 643
++ Y +LK GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI
Sbjct: 49 LMSNAYKRVLLKLS--GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIF 106
Query: 644 RGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLN 703
RG++ +DR+TADYMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI
Sbjct: 107 RGVAGGAAGMDRATADYMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPR 166
Query: 704 AIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSA 763
AI+ LEEGKVVIFA G GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA
Sbjct: 167 AIRQLEEGKVVIFAAGTGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSA 226
Query: 764 IIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
Y I+FDE I + L++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 227 TRYSSISFDEAIGRNLQVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 285
>gi|451823035|ref|YP_007459309.1| uridylate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775835|gb|AGF46876.1| uridylate kinase [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 238
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 180/236 (76%), Gaps = 2/236 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K Y +LK GEALM D + IN + + I +EI ++ + GIE+AIVIGGGNI RG+
Sbjct: 4 KPYKRVLLKLS--GEALMGSDNFGINRTTLSYITTEIVKVFNLGIEIAIVIGGGNIFRGV 61
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ Q +DR+TADYMGM+ATI+N+LAL D L GI + V SA++I++ +E YI A++
Sbjct: 62 APGAQGMDRATADYMGMMATIMNALALQDALKCIGINARVQSALNIDQVVEPYIRPKALR 121
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
YLEEGK+VIFA G GNPFFTTDT AALR AE+ EI+LKATKVDGIYNSDP K A++Y
Sbjct: 122 YLEEGKIVIFAAGTGNPFFTTDTAAALRGAEMGVEIVLKATKVDGIYNSDPKKDPLAVLY 181
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
I+FDEV+ +++E+MD+TAF+ CRDQKLPI+VFSI K+ A +RV+ G+NEGTLV+
Sbjct: 182 SSISFDEVMLRRIEVMDATAFALCRDQKLPIKVFSIYKTDAFRRVVNGENEGTLVH 237
>gi|134277284|ref|ZP_01763999.1| uridylate kinase [Burkholderia pseudomallei 305]
gi|217421961|ref|ZP_03453465.1| UMP kinase [Burkholderia pseudomallei 576]
gi|237812806|ref|YP_002897257.1| uridylate kinase [Burkholderia pseudomallei MSHR346]
gi|242314707|ref|ZP_04813723.1| UMP kinase [Burkholderia pseudomallei 1106b]
gi|76580308|gb|ABA49783.1| uridylate kinase [Burkholderia pseudomallei 1710b]
gi|134250934|gb|EBA51013.1| uridylate kinase [Burkholderia pseudomallei 305]
gi|217395703|gb|EEC35721.1| UMP kinase [Burkholderia pseudomallei 576]
gi|237503761|gb|ACQ96079.1| UMP kinase [Burkholderia pseudomallei MSHR346]
gi|242137946|gb|EES24348.1| UMP kinase [Burkholderia pseudomallei 1106b]
Length = 286
Score = 280 bits (715), Expect = 4e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 63 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 122
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 123 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 182
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 183 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNL 242
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 243 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 285
>gi|170692144|ref|ZP_02883307.1| uridylate kinase [Burkholderia graminis C4D1M]
gi|323526486|ref|YP_004228639.1| uridylate kinase [Burkholderia sp. CCGE1001]
gi|407713932|ref|YP_006834497.1| uridylate kinase [Burkholderia phenoliruptrix BR3459a]
gi|170142574|gb|EDT10739.1| uridylate kinase [Burkholderia graminis C4D1M]
gi|323383488|gb|ADX55579.1| uridylate kinase [Burkholderia sp. CCGE1001]
gi|407236116|gb|AFT86315.1| uridylate kinase [Burkholderia phenoliruptrix BR3459a]
Length = 237
Score = 280 bits (715), Expect = 4e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVLGEDEGTLVH 236
>gi|295676823|ref|YP_003605347.1| uridylate kinase [Burkholderia sp. CCGE1002]
gi|295436666|gb|ADG15836.1| uridylate kinase [Burkholderia sp. CCGE1002]
Length = 237
Score = 279 bits (714), Expect = 4e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDSSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVLGEDEGTLVH 236
>gi|254197767|ref|ZP_04904189.1| uridylate kinase [Burkholderia pseudomallei S13]
gi|169654508|gb|EDS87201.1| uridylate kinase [Burkholderia pseudomallei S13]
Length = 259
Score = 279 bits (714), Expect = 5e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 36 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 95
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 96 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 155
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 156 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNL 215
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 216 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 258
>gi|377820505|ref|YP_004976876.1| uridylate kinase [Burkholderia sp. YI23]
gi|357935340|gb|AET88899.1| uridylate kinase [Burkholderia sp. YI23]
Length = 237
Score = 279 bits (714), Expect = 5e-72, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRIGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GAL+R+++G +EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSITKPGALRRIVQGDDEGTLVH 236
>gi|302879004|ref|YP_003847568.1| 30S ribosomal protein S2 [Gallionella capsiferriformans ES-2]
gi|302581793|gb|ADL55804.1| ribosomal protein S2 [Gallionella capsiferriformans ES-2]
Length = 242
Score = 279 bits (714), Expect = 5e-72, Method: Composition-based stats.
Identities = 128/218 (58%), Positives = 174/218 (79%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++ AGVHFGHQTRFWNPKM+ +IFGHRN+IHIINLEK++ ++ +A Y+ +L KGT+
Sbjct: 7 QMLDAGVHFGHQTRFWNPKMAPFIFGHRNRIHIINLEKSVALFAEAESYVRKLSAKKGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQAR ++ EAVRA PF++ RWLGG+LTN+KT++ SI+RL+E++ G+
Sbjct: 67 LFVATKRQAREILQEEAVRANSPFVNHRWLGGMLTNYKTVQQSIKRLRELEAITAEGA-E 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+ R+ KLNR +GGIK+M +PDAIF+IDVGY KGA+ EA KL IP+IG+V
Sbjct: 126 GVSKKEALVMARELEKLNRSLGGIKDMPNLPDAIFVIDVGYQKGAIVEAKKLGIPVIGIV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SP G+++VIPGNDDS ++I LY +GI DA L+ +
Sbjct: 186 DTNNSPIGVDFVIPGNDDSTQAIRLYARGIADAVLEGR 223
>gi|238021544|ref|ZP_04601970.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147]
gi|237866158|gb|EEP67200.1| hypothetical protein GCWU000324_01444 [Kingella oralis ATCC 51147]
Length = 237
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ ++++A + +L +KGT+
Sbjct: 3 QMIEAGVHFGHQTRYWNPKMAQYIFGARNKIHIINLEKTVPLFQEAQEVVRRLVANKGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 63 LFVGTKRQAREIIKEEAQRAGMPYVDYRWLGGMLTNYKTVKQSIKRLEEKTAILANAESS 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK M +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 123 GYNKKELLDMTREVEKLERSLGGIKEMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+N+SPD + YVIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 183 DSNNSPDLVQYVIPGNDDSAKAIRLYCRGIADAVLEGK 220
>gi|71907374|ref|YP_284961.1| uridylate kinase [Dechloromonas aromatica RCB]
gi|123733253|sp|Q47F90.1|PYRH_DECAR RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|71846995|gb|AAZ46491.1| uridylate kinase [Dechloromonas aromatica RCB]
Length = 238
Score = 279 bits (714), Expect = 5e-72, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 169/223 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN I I EI + G+E+ +VIGGGNI RG++ +DR+TAD
Sbjct: 15 GEALMGSDAYGINPQTIAAICGEIKAVADMGVEIGVVIGGGNIFRGMAGTATGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + G+ + V SA++IE+ +E YI AI+YLEEGK+VIF G
Sbjct: 75 YMGMLATVMNAMALSDAFRQCGLNARVQSALNIEQVVEPYIRGKAIRYLEEGKIVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDGIY++DP K SA Y KI+F+E ISK L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGIYSADPKKDPSATRYDKISFNEAISKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+MD+TAF+ CRDQKLPI VFSI K+GALKRV+ G++EGTLVY
Sbjct: 195 AVMDATAFALCRDQKLPINVFSIFKTGALKRVVCGEDEGTLVY 237
>gi|307729333|ref|YP_003906557.1| uridylate kinase [Burkholderia sp. CCGE1003]
gi|307583868|gb|ADN57266.1| uridylate kinase [Burkholderia sp. CCGE1003]
Length = 237
Score = 279 bits (714), Expect = 5e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIVIGEDEGTLVH 236
>gi|452130270|ref|ZP_21942842.1| stringent starvation protein [Bordetella holmesii H558]
gi|451920195|gb|EMD70341.1| stringent starvation protein [Bordetella holmesii H558]
Length = 203
Score = 279 bits (714), Expect = 6e-72, Method: Composition-based stats.
Identities = 131/178 (73%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+FIH+ LE+ K K AR+ IRDRL LAPL LKNKYM
Sbjct: 85 VMRARTRLFLFNFEKELFIHVSTLEDRSAKPDDKKMVLARQAIRDRLAQLAPLLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|421483501|ref|ZP_15931076.1| stringent starvation protein A [Achromobacter piechaudii HLE]
gi|400198224|gb|EJO31185.1| stringent starvation protein A [Achromobacter piechaudii HLE]
Length = 203
Score = 279 bits (713), Expect = 7e-72, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K AR+ IRDRL LAP+ LKNKYM
Sbjct: 85 VMRARTRLFLYNFEKELFVHVSTLEDRSAKPDEKKLAHARQNIRDRLAQLAPMLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|187479802|ref|YP_787827.1| stringent starvation protein [Bordetella avium 197N]
gi|115424389|emb|CAJ50942.1| stringent starvation protein (glutathione S-transferase)
[Bordetella avium 197N]
Length = 203
Score = 279 bits (713), Expect = 7e-72, Method: Composition-based stats.
Identities = 130/178 (73%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K AR+ IRDRL LAPL LKNKYM
Sbjct: 85 VMRARTRLFLFNFEKELFVHVSALEDRSAKPDDKKMVLARQAIRDRLAQLAPLLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|73541568|ref|YP_296088.1| uridylate kinase [Ralstonia eutropha JMP134]
gi|123774078|sp|Q470D9.1|PYRH_RALEJ RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|72118981|gb|AAZ61244.1| uridylate kinase [Ralstonia eutropha JMP134]
Length = 236
Score = 278 bits (712), Expect = 7e-72, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRATIEGMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDG+Y +DP K SA Y ITFDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGVYTADPKKDPSATRYTTITFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRV+ G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVVLGEDEGTLVH 235
>gi|413962884|ref|ZP_11402111.1| uridylate kinase [Burkholderia sp. SJ98]
gi|413928716|gb|EKS68004.1| uridylate kinase [Burkholderia sp. SJ98]
Length = 237
Score = 278 bits (712), Expect = 7e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADVAEVVRIGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y++DP K A Y I+FDE I K L
Sbjct: 134 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYSADPKKDPHATRYSTISFDEAIGKNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G +EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSITKPGALKRIVQGDDEGTLVH 236
>gi|238026904|ref|YP_002911135.1| uridylate kinase [Burkholderia glumae BGR1]
gi|237876098|gb|ACR28431.1| Uridylate kinase [Burkholderia glumae BGR1]
Length = 259
Score = 278 bits (712), Expect = 9e-72, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 36 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 95
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 96 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 155
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y +DP K SA Y I+FDE I + L
Sbjct: 156 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYTADPKKDPSATRYASISFDEAIGRNL 215
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 216 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 258
>gi|160900932|ref|YP_001566514.1| glutathione S-transferase domain-containing protein [Delftia
acidovorans SPH-1]
gi|333912765|ref|YP_004486497.1| glutathione S-transferase domain-containing protein [Delftia sp.
Cs1-4]
gi|160366516|gb|ABX38129.1| Glutathione S-transferase domain [Delftia acidovorans SPH-1]
gi|333742965|gb|AEF88142.1| Glutathione S-transferase domain protein [Delftia sp. Cs1-4]
Length = 203
Score = 278 bits (712), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 154/178 (86%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF+KP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFSKPEDISVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE K + K ++AR IRDRL LAP+FLKNKYM
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSTLEERNVKGNEKAIEKARAHIRDRLTQLAPVFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+ FSMLDV IAPLLWRLDYYGI +SK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGENFSMLDVAIAPLLWRLDYYGIEVSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|53719766|ref|YP_108752.1| uridylate kinase [Burkholderia pseudomallei K96243]
gi|53723737|ref|YP_103193.1| uridylate kinase [Burkholderia mallei ATCC 23344]
gi|124385810|ref|YP_001029193.1| uridylate kinase [Burkholderia mallei NCTC 10229]
gi|126441440|ref|YP_001059467.1| uridylate kinase [Burkholderia pseudomallei 668]
gi|126449823|ref|YP_001080877.1| uridylate kinase [Burkholderia mallei NCTC 10247]
gi|126451809|ref|YP_001066750.1| uridylate kinase [Burkholderia pseudomallei 1106a]
gi|162210048|ref|YP_333973.2| uridylate kinase [Burkholderia pseudomallei 1710b]
gi|167720164|ref|ZP_02403400.1| uridylate kinase [Burkholderia pseudomallei DM98]
gi|167739169|ref|ZP_02411943.1| uridylate kinase [Burkholderia pseudomallei 14]
gi|167816380|ref|ZP_02448060.1| uridylate kinase [Burkholderia pseudomallei 91]
gi|167824758|ref|ZP_02456229.1| uridylate kinase [Burkholderia pseudomallei 9]
gi|167837039|ref|ZP_02463922.1| uridylate kinase [Burkholderia thailandensis MSMB43]
gi|167846290|ref|ZP_02471798.1| uridylate kinase [Burkholderia pseudomallei B7210]
gi|167894872|ref|ZP_02482274.1| uridylate kinase [Burkholderia pseudomallei 7894]
gi|167903261|ref|ZP_02490466.1| uridylate kinase [Burkholderia pseudomallei NCTC 13177]
gi|167911502|ref|ZP_02498593.1| uridylate kinase [Burkholderia pseudomallei 112]
gi|167919511|ref|ZP_02506602.1| uridylate kinase [Burkholderia pseudomallei BCC215]
gi|254178555|ref|ZP_04885210.1| uridylate kinase [Burkholderia mallei ATCC 10399]
gi|254179323|ref|ZP_04885922.1| uridylate kinase [Burkholderia pseudomallei 1655]
gi|254189291|ref|ZP_04895802.1| uridylate kinase [Burkholderia pseudomallei Pasteur 52237]
gi|254258429|ref|ZP_04949483.1| UMP kinase [Burkholderia pseudomallei 1710a]
gi|254297207|ref|ZP_04964660.1| uridylate kinase [Burkholderia pseudomallei 406e]
gi|254358108|ref|ZP_04974381.1| uridylate kinase [Burkholderia mallei 2002721280]
gi|386861329|ref|YP_006274278.1| uridylate kinase [Burkholderia pseudomallei 1026b]
gi|418382739|ref|ZP_12966673.1| uridylate kinase [Burkholderia pseudomallei 354a]
gi|418538488|ref|ZP_13104097.1| uridylate kinase [Burkholderia pseudomallei 1026a]
gi|418544860|ref|ZP_13110130.1| uridylate kinase [Burkholderia pseudomallei 1258a]
gi|418551662|ref|ZP_13116570.1| uridylate kinase [Burkholderia pseudomallei 1258b]
gi|418557707|ref|ZP_13122295.1| uridylate kinase [Burkholderia pseudomallei 354e]
gi|81379505|sp|Q63T14.1|PYRH_BURPS RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|81604822|sp|Q62JC6.1|PYRH_BURMA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171769473|sp|A1V567.2|PYRH_BURMS RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171769830|sp|A2SB74.1|PYRH_BURM9 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171855042|sp|A3MKU1.1|PYRH_BURM7 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171855111|sp|A3NAU6.1|PYRH_BURP6 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171855122|sp|A3NWM9.1|PYRH_BURP0 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|172046643|sp|Q3JR30.2|PYRH_BURP1 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|52210180|emb|CAH36159.1| uridylate kinase [Burkholderia pseudomallei K96243]
gi|52427160|gb|AAU47753.1| uridylate kinase [Burkholderia mallei ATCC 23344]
gi|124293830|gb|ABN03099.1| UMP kinase [Burkholderia mallei NCTC 10229]
gi|126220933|gb|ABN84439.1| UMP kinase [Burkholderia pseudomallei 668]
gi|126225451|gb|ABN88991.1| uridylate kinase [Burkholderia pseudomallei 1106a]
gi|126242693|gb|ABO05786.1| UMP kinase [Burkholderia mallei NCTC 10247]
gi|148027235|gb|EDK85256.1| uridylate kinase [Burkholderia mallei 2002721280]
gi|157808053|gb|EDO85223.1| uridylate kinase [Burkholderia pseudomallei 406e]
gi|157936970|gb|EDO92640.1| uridylate kinase [Burkholderia pseudomallei Pasteur 52237]
gi|160699594|gb|EDP89564.1| uridylate kinase [Burkholderia mallei ATCC 10399]
gi|184209863|gb|EDU06906.1| uridylate kinase [Burkholderia pseudomallei 1655]
gi|254217118|gb|EET06502.1| UMP kinase [Burkholderia pseudomallei 1710a]
gi|385347215|gb|EIF53878.1| uridylate kinase [Burkholderia pseudomallei 1258b]
gi|385347774|gb|EIF54424.1| uridylate kinase [Burkholderia pseudomallei 1026a]
gi|385347888|gb|EIF54534.1| uridylate kinase [Burkholderia pseudomallei 1258a]
gi|385364364|gb|EIF70081.1| uridylate kinase [Burkholderia pseudomallei 354e]
gi|385377081|gb|EIF81701.1| uridylate kinase [Burkholderia pseudomallei 354a]
gi|385658457|gb|AFI65880.1| uridylate kinase [Burkholderia pseudomallei 1026b]
Length = 237
Score = 278 bits (712), Expect = 9e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 236
>gi|349575984|ref|ZP_08887881.1| 30S ribosomal protein S2 [Neisseria shayeganii 871]
gi|348012451|gb|EGY51401.1| 30S ribosomal protein S2 [Neisseria shayeganii 871]
Length = 241
Score = 278 bits (712), Expect = 9e-72, Method: Composition-based stats.
Identities = 130/218 (59%), Positives = 167/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL ++++A + +L +KGT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMEQYIFGARNKIHIVNLEKTLPLFQEAQDVVRRLAANKGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 68 LFVGTKRQARDIIREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAVLENAETS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIKNM +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 128 GYNKKELLDMQREVDKLERSLGGIKNMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +G+ DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGMADAVLEGK 225
>gi|167563186|ref|ZP_02356102.1| uridylate kinase [Burkholderia oklahomensis EO147]
gi|167570369|ref|ZP_02363243.1| uridylate kinase [Burkholderia oklahomensis C6786]
Length = 237
Score = 278 bits (712), Expect = 9e-72, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDSSATRYSSISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 236
>gi|325267206|ref|ZP_08133872.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394]
gi|324981339|gb|EGC16985.1| 30S ribosomal protein S2 [Kingella denitrificans ATCC 33394]
Length = 249
Score = 278 bits (712), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 167/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKT+ ++++A + +L +KGT+
Sbjct: 17 QMIEAGVHFGHQTRYWNPKMAQYIFGVRNKIHIINLEKTVPLFQEAQEVVRRLVANKGTV 76
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 77 LFVGTKRQARDIIKEEAQRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKAAVLANAETS 136
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 137 GYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 196
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+N+SPD + ++IPGNDDSAK+I LY +GI DA L+ K
Sbjct: 197 DSNNSPDLVKHIIPGNDDSAKAIRLYCRGIADAVLEGK 234
>gi|161723168|ref|YP_442553.2| uridylate kinase [Burkholderia thailandensis E264]
gi|167581480|ref|ZP_02374354.1| uridylate kinase [Burkholderia thailandensis TXDOH]
gi|167619590|ref|ZP_02388221.1| uridylate kinase [Burkholderia thailandensis Bt4]
gi|257138762|ref|ZP_05587024.1| uridylate kinase [Burkholderia thailandensis E264]
gi|172046090|sp|Q2SWZ6.2|PYRH_BURTA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
Length = 237
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 236
>gi|452126896|ref|ZP_21939479.1| stringent starvation protein [Bordetella holmesii F627]
gi|451921991|gb|EMD72136.1| stringent starvation protein [Bordetella holmesii F627]
Length = 203
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 130/178 (73%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPIL+ERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILIERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+FIH+ LE+ K K AR+ IRDRL LAPL LKNKYM
Sbjct: 85 VMRARTRLFLFNFEKELFIHVSTLEDRSAKPDDKKMVLARQAIRDRLAQLAPLLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|33573179|emb|CAE36831.1| uridylate kinase [Bordetella parapertussis]
Length = 220
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 135/219 (61%), Positives = 173/219 (78%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN S I + EI+E+ + G+ELAIVIGGGNI RG++ Q +DR+TADYMGM
Sbjct: 1 MGEDAFGINRSTIVRMTDEIAEVAALGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
+ATI+N+LAL D L G+ + V SA++I++ +E YI A++YLEEGKVVIFA G GNP
Sbjct: 61 MATIMNALALQDALKHKGVDTRVQSALNIDQVVEPYIRPKALRYLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR AEI AEI+LKATKVDGIY++DPNK +A Y +I+FDE I ++LE+MD
Sbjct: 121 FFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPNKDPTATRYARISFDEAIVRRLEVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPI+VFSI K GALKR + G++EGTLV+
Sbjct: 181 ATAFALCRDQKLPIKVFSINKFGALKRAVSGEDEGTLVH 219
>gi|293602852|ref|ZP_06685291.1| stringent starvation protein A [Achromobacter piechaudii ATCC
43553]
gi|292818646|gb|EFF77688.1| stringent starvation protein A [Achromobacter piechaudii ATCC
43553]
Length = 203
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDIAVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K AR+ IRDRL LAP+ LKNKYM
Sbjct: 85 VMRARTRLFLYNFEKELFVHVSTLEDRSAKPDEKKLANARQNIRDRLAQLAPMLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|311103389|ref|YP_003976242.1| stringent starvation protein A [Achromobacter xylosoxidans A8]
gi|359796731|ref|ZP_09299325.1| stringent starvation protein A [Achromobacter arsenitoxydans SY8]
gi|422321892|ref|ZP_16402936.1| stringent starvation protein A [Achromobacter xylosoxidans C54]
gi|423015058|ref|ZP_17005779.1| stringent starvation protein A [Achromobacter xylosoxidans AXX-A]
gi|310758078|gb|ADP13527.1| stringent starvation protein A [Achromobacter xylosoxidans A8]
gi|317403219|gb|EFV83739.1| stringent starvation protein A [Achromobacter xylosoxidans C54]
gi|338781966|gb|EGP46345.1| stringent starvation protein A [Achromobacter xylosoxidans AXX-A]
gi|359365323|gb|EHK67026.1| stringent starvation protein A [Achromobacter arsenitoxydans SY8]
Length = 203
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 152/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDISVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE+ K K AR+ IRDRL LAP+ LKNKYM
Sbjct: 85 VMRARTRLFLYNFEKELFVHVSTLEDRSAKPDEKKLANARQNIRDRLAQLAPMLLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+PL KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPLQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|302879002|ref|YP_003847566.1| uridylate kinase [Gallionella capsiferriformans ES-2]
gi|302581791|gb|ADL55802.1| uridylate kinase [Gallionella capsiferriformans ES-2]
Length = 239
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 130/222 (58%), Positives = 178/222 (80%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN ++I+ I++EI+E+V+ G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 15 GEALMGDDSYGINRTVIERIVAEIAEVVAMGVQVAMVIGGGNIFRGVAPAAAGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NS+AL D +N++G+ V SA+++E+ E +I A++YLEEGKVVIFA G
Sbjct: 75 YMGMLATVMNSMALQDAMNRAGLDCRVQSALNLEQVAEPFIRGKALRYLEEGKVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
IG+PFFTTDT AALR E+ AE+++KATKVDGIY +DP K A+ Y+ ++FDE ISK L
Sbjct: 135 IGSPFFTTDTAAALRGVEMSAEVVIKATKVDGIYTADPKKDPHAVRYQSLSFDEAISKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI K+GALKRV+ G+ EGTLV
Sbjct: 195 QVMDATALTLCRDQKLPIIVFSIFKAGALKRVVFGEGEGTLV 236
>gi|78066796|ref|YP_369565.1| uridylate kinase [Burkholderia sp. 383]
gi|123742569|sp|Q39F45.1|PYRH_BURS3 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|77967541|gb|ABB08921.1| uridylate kinase [Burkholderia sp. 383]
Length = 237
Score = 278 bits (711), Expect = 1e-71, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y ITFDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTITFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 236
>gi|330817437|ref|YP_004361142.1| Uridylate kinase [Burkholderia gladioli BSR3]
gi|327369830|gb|AEA61186.1| Uridylate kinase [Burkholderia gladioli BSR3]
Length = 259
Score = 278 bits (710), Expect = 1e-71, Method: Composition-based stats.
Identities = 128/223 (57%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++++E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 36 GEALMGDDAFGINRATIERMVADVAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 95
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 96 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 155
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y +DP K SA Y I+FDE I + L
Sbjct: 156 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYTADPKKDPSATRYTSISFDEAIGRNL 215
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 216 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 258
>gi|393760718|ref|ZP_10349524.1| stringent starvation protein A [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161038|gb|EJC61106.1| stringent starvation protein A [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 202
Score = 278 bits (710), Expect = 1e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
MRAR RL L NFEKE+F+H+ LE+ RN + K ++AR++IR+ L LAP+ LKNKYM
Sbjct: 85 TMRARTRLFLYNFEKELFVHVAALEDRRNADA-KAQEQARQQIRNHLSQLAPILLKNKYM 143
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI L KSA+P+ KYAER+FSRP+Y+E+LTP+EK+M+
Sbjct: 144 LGEEFSMLDVAIAPLLWRLDHYGIELPKSAAPVQKYAERVFSRPAYIEALTPSEKVMR 201
>gi|254247885|ref|ZP_04941206.1| uridylate kinase [Burkholderia cenocepacia PC184]
gi|124872661|gb|EAY64377.1| uridylate kinase [Burkholderia cenocepacia PC184]
Length = 259
Score = 277 bits (709), Expect = 2e-71, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 36 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 95
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 96 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 155
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE IS+ L
Sbjct: 156 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAISRNL 215
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 216 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 258
>gi|289208671|ref|YP_003460737.1| 30S ribosomal protein S2 [Thioalkalivibrio sp. K90mix]
gi|288944302|gb|ADC72001.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix]
Length = 260
Score = 277 bits (709), Expect = 2e-71, Method: Composition-based stats.
Identities = 125/224 (55%), Positives = 171/224 (76%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
SL ++++AGVHFGHQTR+W+PKM+ YIFG RNKIHIINLEK+L M+ A+ ++ ++
Sbjct: 2 SLVTMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKSLPMFNDALNFLGKIA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G ++FVGTKR AR V+A EA R GMPF+ RWLGG+LTNF T+K SI+RLK+++
Sbjct: 62 ADGGKIMFVGTKRSAREVVAEEARRCGMPFVSHRWLGGMLTNFSTVKQSIKRLKDLETMD 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+GS L+K+EAL R++ KL R +GGIK+MN +PDA+F+IDVGY K AV+EA K I
Sbjct: 122 ADGSFEVLNKREALTRRREKDKLERSLGGIKDMNRMPDAMFVIDVGYEKIAVAEAKKRGI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
P++ VVD+NHSP+G++YVIPGNDD+ ++I LY I D ++AK
Sbjct: 182 PVVAVVDSNHSPEGVDYVIPGNDDAMRAIQLYVAAIADTIIEAK 225
>gi|344339492|ref|ZP_08770421.1| ribosomal protein S2 [Thiocapsa marina 5811]
gi|343800796|gb|EGV18741.1| ribosomal protein S2 [Thiocapsa marina 5811]
Length = 251
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 121/221 (54%), Positives = 171/221 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM ++IFG RNKIHI+NLEKTL +Y++A+ ++ L + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMGAFIFGQRNKIHIVNLEKTLPLYQEAVNFMGSLTANGGRI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I EA+R GMP+++ RWLGG+LTNFKTI+ S++RLKE++ G+I
Sbjct: 63 LFVGTKRAARDAIKEEALRCGMPYVNHRWLGGMLTNFKTIRHSVKRLKELETMFAEGTIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R++ KL + IGGIK+M+ +PDA+F++DVG+ K AV+EA KL IP++GVV
Sbjct: 123 RFNKKEALGLARERAKLEQSIGGIKDMDGLPDAMFVVDVGHEKIAVTEANKLGIPVVGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN+ P ++YVIPGNDD+ +++ LY G DA LD +
Sbjct: 183 DTNNDPSKVDYVIPGNDDAIRAVRLYISGAADAILDGRNTA 223
>gi|421748130|ref|ZP_16185767.1| uridylate kinase [Cupriavidus necator HPC(L)]
gi|409773178|gb|EKN55024.1| uridylate kinase [Cupriavidus necator HPC(L)]
Length = 236
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|113868032|ref|YP_726521.1| uridylate kinase [Ralstonia eutropha H16]
gi|122946816|sp|Q0KA18.1|PYRH_RALEH RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|113526808|emb|CAJ93153.1| uridylate kinase [Ralstonia eutropha H16]
Length = 236
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEAMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AE++LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEVVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI+K GALKR+I G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIRVFSIVKPGALKRIILGEDEGTLVH 235
>gi|393757795|ref|ZP_10346619.1| uridylate kinase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|424776701|ref|ZP_18203679.1| uridylate kinase [Alcaligenes sp. HPC1271]
gi|393165487|gb|EJC65536.1| uridylate kinase [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|422888124|gb|EKU30515.1| uridylate kinase [Alcaligenes sp. HPC1271]
Length = 238
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D++ IN S I + EI+++ G++LAIVIGGGNI RGI+ Q +DR+TAD
Sbjct: 15 GEALMGEDSFGINRSTIIRMTEEIAQVAQLGVQLAIVIGGGNIFRGIAPGAQGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D L G+ + V SA++IE+ +E YI A++YLEE KVVIFA G
Sbjct: 75 YMGMMATVMNALALQDALKHRGLDARVQSALNIEQVVEPYIRPKALRYLEENKVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ AEI+LKATKVDGIY++DPNK A Y +I+FDE I ++L
Sbjct: 135 TGNPFFTTDTAAALRGAEVGAEIVLKATKVDGIYSADPNKDPGATRYSRISFDEAIVRRL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+TAF+ CRDQKLPI+VFSI K GAL R + G++EGTLV+
Sbjct: 195 EVMDATAFALCRDQKLPIKVFSINKPGALTRAVSGEDEGTLVH 237
>gi|254252061|ref|ZP_04945379.1| uridylate kinase [Burkholderia dolosa AUO158]
gi|124894670|gb|EAY68550.1| uridylate kinase [Burkholderia dolosa AUO158]
Length = 259
Score = 277 bits (708), Expect = 2e-71, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G ++A+VIGGGNI RG++ +DR+TAD
Sbjct: 36 GEALMGDDAFGINRATIERMVADIAEVVRLGTQMAVVIGGGNIFRGVAGGAAGMDRATAD 95
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 96 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 155
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE IS+ L
Sbjct: 156 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYATISFDEAISRNL 215
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 216 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 258
>gi|456063592|ref|YP_007502562.1| Uridylate kinase [beta proteobacterium CB]
gi|455440889|gb|AGG33827.1| Uridylate kinase [beta proteobacterium CB]
Length = 236
Score = 277 bits (708), Expect = 3e-71, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 177/223 (79%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN I +++ EI+++V+ G++LAIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINPITIDSMVKEIADVVNSGVQLAIVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D L + G+ + V SA+ +++ +E YI AI+ L EGKVVIFA G
Sbjct: 73 YMGMLATMMNSLALQDALRQKGVEARVQSALRMDQVVEPYIRPRAIRALSEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ AEI+LKATKVDGIY++DP K +A +YK ITFDE I K L
Sbjct: 133 TGNPFFTTDTAAALRGAEMAAEIVLKATKVDGIYSADPMKDPTATLYKTITFDEAIIKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRD+KLPI+VFSI+K GAL RV++G++EGTLV+
Sbjct: 193 QVMDATAFALCRDRKLPIKVFSILKPGALMRVVQGESEGTLVH 235
>gi|339326119|ref|YP_004685812.1| uridylate kinase [Cupriavidus necator N-1]
gi|338166276|gb|AEI77331.1| uridylate kinase PyrH [Cupriavidus necator N-1]
Length = 236
Score = 277 bits (708), Expect = 3e-71, Method: Composition-based stats.
Identities = 135/223 (60%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGEDAFGINRSTIEAMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y ITFDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTITFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|332525565|ref|ZP_08401720.1| putative transcription modulator protein [Rubrivivax
benzoatilyticus JA2]
gi|332109130|gb|EGJ10053.1| putative transcription modulator protein [Rubrivivax
benzoatilyticus JA2]
Length = 203
Score = 277 bits (708), Expect = 3e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 153/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF KP++I MNPY +VPILVERDLILYES+IINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFAKPEDIAMMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F H+ +LE K + K ++AR +IRDRL LAP+FLKNKYM
Sbjct: 85 VARARVRLFLFNFEKELFAHVNLLEGRGIKATDKQLEKARAQIRDRLTQLAPIFLKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLDV IAPLLWRLDYYGI+LSK+A PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDDFSMLDVAIAPLLWRLDYYGIDLSKNAVPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|407000737|gb|EKE17941.1| hypothetical protein ACD_10C00203G0004 [uncultured bacterium]
Length = 238
Score = 276 bits (707), Expect = 3e-71, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 170/223 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN I I EI + G+E+ +VIGGGNI RG++ +DR+TAD
Sbjct: 15 GEALMGDDAYGINPQTIAGICGEIKAVADLGVEIGVVIGGGNIFRGMAGTATGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + + G+ + V SA++IE+ +E YI AI+YLEEGK+VIF G
Sbjct: 75 YMGMLATVMNAMALSDAMRQCGLNARVQSALNIEQVVEPYIRGKAIRYLEEGKIVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDGIY +DP K SA + KI+F++VIS+ L
Sbjct: 135 TGNPFFTTDTAAALRGSEIGADIVLKATKVDGIYTADPKKDPSATRFDKISFNDVISRNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+MD+TAF+ CRDQKLPI VFSI K+GALKRV+ G++EGTLVY
Sbjct: 195 AVMDATAFALCRDQKLPINVFSIFKAGALKRVVCGEDEGTLVY 237
>gi|430810561|ref|ZP_19437673.1| uridylate kinase [Cupriavidus sp. HMR-1]
gi|172046216|sp|Q1LNF6.2|PYRH_RALME RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|429496969|gb|EKZ95526.1| uridylate kinase [Cupriavidus sp. HMR-1]
Length = 236
Score = 276 bits (707), Expect = 3e-71, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRATIEGMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHASIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|107028803|ref|YP_625898.1| uridylate kinase [Burkholderia cenocepacia AU 1054]
gi|116690038|ref|YP_835661.1| uridylate kinase [Burkholderia cenocepacia HI2424]
gi|161524432|ref|YP_001579444.1| uridylate kinase [Burkholderia multivorans ATCC 17616]
gi|167586857|ref|ZP_02379245.1| uridylate kinase [Burkholderia ubonensis Bu]
gi|170733373|ref|YP_001765320.1| uridylate kinase [Burkholderia cenocepacia MC0-3]
gi|189350813|ref|YP_001946441.1| uridylate kinase [Burkholderia multivorans ATCC 17616]
gi|206560451|ref|YP_002231215.1| uridylate kinase [Burkholderia cenocepacia J2315]
gi|221198320|ref|ZP_03571366.1| uridylate kinase [Burkholderia multivorans CGD2M]
gi|221208259|ref|ZP_03581263.1| uridylate kinase [Burkholderia multivorans CGD2]
gi|221215459|ref|ZP_03588423.1| uridylate kinase [Burkholderia multivorans CGD1]
gi|421469401|ref|ZP_15917862.1| UMP kinase [Burkholderia multivorans ATCC BAA-247]
gi|421475347|ref|ZP_15923308.1| UMP kinase [Burkholderia multivorans CF2]
gi|421865679|ref|ZP_16297354.1| Uridylate kinase [Burkholderia cenocepacia H111]
gi|444358422|ref|ZP_21159828.1| UMP kinase [Burkholderia cenocepacia BC7]
gi|444369953|ref|ZP_21169653.1| UMP kinase [Burkholderia cenocepacia K56-2Valvano]
gi|123070967|sp|Q1BHI0.1|PYRH_BURCA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|171855183|sp|A0K8E1.1|PYRH_BURCH RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|105897967|gb|ABF80925.1| uridylate kinase [Burkholderia cenocepacia AU 1054]
gi|116648127|gb|ABK08768.1| uridylate kinase [Burkholderia cenocepacia HI2424]
gi|160341861|gb|ABX14947.1| uridylate kinase [Burkholderia multivorans ATCC 17616]
gi|169816615|gb|ACA91198.1| uridylate kinase [Burkholderia cenocepacia MC0-3]
gi|189334835|dbj|BAG43905.1| uridylate kinase [Burkholderia multivorans ATCC 17616]
gi|198036492|emb|CAR52389.1| uridylate kinase [Burkholderia cenocepacia J2315]
gi|221164643|gb|EED97125.1| uridylate kinase [Burkholderia multivorans CGD1]
gi|221171907|gb|EEE04350.1| uridylate kinase [Burkholderia multivorans CGD2]
gi|221182252|gb|EEE14653.1| uridylate kinase [Burkholderia multivorans CGD2M]
gi|358074260|emb|CCE48232.1| Uridylate kinase [Burkholderia cenocepacia H111]
gi|400230033|gb|EJO59856.1| UMP kinase [Burkholderia multivorans ATCC BAA-247]
gi|400230375|gb|EJO60162.1| UMP kinase [Burkholderia multivorans CF2]
gi|443598261|gb|ELT66634.1| UMP kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443604105|gb|ELT72066.1| UMP kinase [Burkholderia cenocepacia BC7]
Length = 237
Score = 276 bits (707), Expect = 3e-71, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYTTISFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR++ G++EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVLGEDEGTLVH 236
>gi|350562911|ref|ZP_08931734.1| ribosomal protein S2 [Thioalkalimicrobium aerophilum AL3]
gi|349779777|gb|EGZ34118.1| ribosomal protein S2 [Thioalkalimicrobium aerophilum AL3]
Length = 247
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 166/220 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTR+WNPKM YIFG RNKIHI+NLEKTL M+ A+ + + +KG +
Sbjct: 8 QMLEAGCHFGHQTRYWNPKMGQYIFGARNKIHIVNLEKTLPMFNDALNFAGSVVANKGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR V+A EA R GMP+++ RWLGG+LTNFKTIK SI+RLKE++ +G+
Sbjct: 68 LFVGTKRAAREVVAQEATRCGMPYVNHRWLGGMLTNFKTIKQSIKRLKELETMSQDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++K+E L R+ KL +GGIK+M +PDAIF+ID G A+ EA KL IP+IGVV
Sbjct: 128 KITKREVLTLTREMEKLELSLGGIKDMRAMPDAIFVIDTGNEDIAILEARKLGIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
DTN++PDG++Y+IPGNDD+ ++I LY + + DA L+AK
Sbjct: 188 DTNNNPDGVDYIIPGNDDAIRAIKLYLESMADAVLEAKAT 227
>gi|332286357|ref|YP_004418268.1| stringent starvation protein A [Pusillimonas sp. T7-7]
gi|330430310|gb|AEC21644.1| stringent starvation protein A [Pusillimonas sp. T7-7]
Length = 216
Score = 276 bits (707), Expect = 3e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 39 MDFEIRDIDLYNKPEDIAVMNPYGQVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 98
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ LE +R+ T K AR+ IRDRL LAPL LKNK+M
Sbjct: 99 VMRARTRLFLYNFEKELFVHVSALE-DRSSTDTKAQDLARQNIRDRLAQLAPLLLKNKFM 157
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+P+ KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 158 LGEEFSMLDVAVAPLLWRLDHYGIELPKNAAPIQKYAERIFSRPAYIEALTPSEKVMR 215
>gi|424775882|ref|ZP_18202870.1| stringent starvation protein A [Alcaligenes sp. HPC1271]
gi|422888761|gb|EKU31145.1| stringent starvation protein A [Alcaligenes sp. HPC1271]
Length = 202
Score = 276 bits (706), Expect = 4e-71, Method: Composition-based stats.
Identities = 128/178 (71%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL+NKP++I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDLYNKPEDIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
MRAR RL L NFEKE+F+H+ LE+ RN + K + AR++IR+ L LAP+ LKNKYM
Sbjct: 85 TMRARTRLFLYNFEKELFVHVAALEDRRNADA-KAQELARQQIRNHLSQLAPILLKNKYM 143
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI L KSA+P+ KYAER+FSRP+Y+E+LTP+EK+M+
Sbjct: 144 LGEEFSMLDVAIAPLLWRLDHYGIELPKSAAPVQKYAERVFSRPAYIEALTPSEKVMR 201
>gi|350572498|ref|ZP_08940795.1| 30S ribosomal protein S2 [Neisseria wadsworthii 9715]
gi|349789935|gb|EGZ43864.1| 30S ribosomal protein S2 [Neisseria wadsworthii 9715]
Length = 242
Score = 276 bits (706), Expect = 4e-71, Method: Composition-based stats.
Identities = 129/218 (59%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL ++++A + +L +KG +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMEQYIFGARNKIHIINLEKTLPLFQEAQEVVRRLAANKGNI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA RAGMP++D RWLGG+LTN+KT+K SI+RL+E + N
Sbjct: 68 LFVGTKRQAREIVREEATRAGMPYVDHRWLGGMLTNYKTVKQSIKRLEEKRAVLENAEAS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKE L R+ KL R +GGIK+M +PDAIF+ID GY G + EA KL IP+I VV
Sbjct: 128 GYNKKELLDMTREVEKLERSLGGIKDMKGLPDAIFVIDTGYQHGTLVEAAKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDG+ +VIPGNDDSAK+I LY +GI DA L+ K
Sbjct: 188 DTNNSPDGVKHVIPGNDDSAKAIRLYCRGIADAVLEGK 225
>gi|221068982|ref|ZP_03545087.1| Glutathione S-transferase domain protein [Comamonas testosteroni
KF-1]
gi|264676886|ref|YP_003276792.1| GSH-dependent dehydroascorbate reductase [Comamonas testosteroni
CNB-2]
gi|299529704|ref|ZP_07043141.1| Putative GSH-dependent dehydroascorbate reductase [Comamonas
testosteroni S44]
gi|418529189|ref|ZP_13095129.1| GSH-dependent dehydroascorbate reductase [Comamonas testosteroni
ATCC 11996]
gi|220714005|gb|EED69373.1| Glutathione S-transferase domain protein [Comamonas testosteroni
KF-1]
gi|262207398|gb|ACY31496.1| Putative GSH-dependent dehydroascorbate reductase [Comamonas
testosteroni CNB-2]
gi|298722567|gb|EFI63487.1| Putative GSH-dependent dehydroascorbate reductase [Comamonas
testosteroni S44]
gi|371453615|gb|EHN66627.1| GSH-dependent dehydroascorbate reductase [Comamonas testosteroni
ATCC 11996]
Length = 203
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 153/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF+KP+ I MNPYGQVPILVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFSKPEEIAVMNPYGQVPILVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL LLNFEKE+F+H+ LE K + K ++AR IRDRL +AP+FLKNKY+
Sbjct: 85 VDRARVRLFLLNFEKELFVHVSALEERNVKGNEKALEKARAHIRDRLTQMAPIFLKNKYI 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+G+ FSMLDV IAPLLWRLDYYGI LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 MGENFSMLDVAIAPLLWRLDYYGIELSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|288941758|ref|YP_003443998.1| 30S ribosomal protein S2 [Allochromatium vinosum DSM 180]
gi|288897130|gb|ADC62966.1| ribosomal protein S2 [Allochromatium vinosum DSM 180]
Length = 242
Score = 276 bits (706), Expect = 5e-71, Method: Composition-based stats.
Identities = 123/221 (55%), Positives = 170/221 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM ++IFG RNKIHI+NLEKTL +Y+ A+ ++ L + G +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMGAFIFGQRNKIHIVNLEKTLPLYQDAVNFMGTLAANGGKI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I EA R GMPF++ RWLGG+LTNFKTI+ S++RLK+++ +G+I
Sbjct: 63 LFVGTKRAARDAIREEAERCGMPFVNHRWLGGMLTNFKTIRQSVKRLKDLEAMFESGTIE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKEAL R++ KL +GGIKNM+ +PDA+F+IDVG+ K AV+EA KL IP+IGVV
Sbjct: 123 RFNKKEALGLSRERDKLELSLGGIKNMDGLPDALFVIDVGHEKIAVTEANKLGIPVIGVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN+ P ++YVIPGNDD+ +++ LY G DA LD ++
Sbjct: 183 DTNNDPSNVDYVIPGNDDAIRAVRLYIAGAADAILDGRSTA 223
>gi|94310379|ref|YP_583589.1| uridylate kinase [Cupriavidus metallidurans CH34]
gi|93354231|gb|ABF08320.1| uridylate kinase [Cupriavidus metallidurans CH34]
Length = 258
Score = 276 bits (706), Expect = 5e-71, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 35 GEALMGDDAFGINRATIEGMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 94
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 95 YMGMLATMMNALALQDAMRHASIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 154
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 155 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 214
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 215 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 257
>gi|194289790|ref|YP_002005697.1| uridylate kinase [Cupriavidus taiwanensis LMG 19424]
gi|193223625|emb|CAQ69632.1| uridylate kinase [Cupriavidus taiwanensis LMG 19424]
Length = 236
Score = 276 bits (705), Expect = 5e-71, Method: Composition-based stats.
Identities = 134/223 (60%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEAMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI+K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIVKPGALKRVILGEDEGTLVH 235
>gi|383756906|ref|YP_005435891.1| stringent starvation protein A SspA [Rubrivivax gelatinosus IL144]
gi|381377575|dbj|BAL94392.1| stringent starvation protein A SspA [Rubrivivax gelatinosus IL144]
Length = 203
Score = 276 bits (705), Expect = 6e-71, Method: Composition-based stats.
Identities = 127/178 (71%), Positives = 153/178 (85%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF KP++I MNPY +VPILVERDLILYES+IINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFAKPEDIAMMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F H+ +LE K + K ++AR +IRDRL LAP+F+KNKYM
Sbjct: 85 VARARVRLFLFNFEKELFAHVNLLEGRGIKATDKQLEKARSQIRDRLTQLAPIFVKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLDV IAPLLWRLDYYGI+LSK+A PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGDDFSMLDVAIAPLLWRLDYYGIDLSKNAVPLLKYAERIFSRPAYIEALTPSEKVMR 202
>gi|312796246|ref|YP_004029168.1| uridylate kinase [Burkholderia rhizoxinica HKI 454]
gi|312168021|emb|CBW75024.1| Uridylate kinase (EC 2.7.4.22) [Burkholderia rhizoxinica HKI 454]
Length = 237
Score = 275 bits (704), Expect = 7e-71, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 175/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN I+ I+++I ++V+ G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDAFGINRMTIERIVADIVDVVNLGAQLAVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEG+VVIFA G
Sbjct: 74 YMGMLATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGRVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKATKVDG+Y++DP K +A Y I+FDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGAEIGAEVVLKATKVDGVYSADPKKDPTATRYAMISFDEAISRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPIRVFSI K GALKR+++G +EGTLV+
Sbjct: 194 QVMDATAFALCRDQKLPIRVFSINKPGALKRIVQGDDEGTLVH 236
>gi|333983342|ref|YP_004512552.1| 30S ribosomal protein S2 [Methylomonas methanica MC09]
gi|333807383|gb|AEG00053.1| ribosomal protein S2 [Methylomonas methanica MC09]
Length = 247
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+SY+FG RNKIHII+LE+TL M+ A+ Y+ Q+ +KG +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMASYLFGARNKIHIIDLEQTLPMFNDAMNYLGQMTANKGNI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI- 293
LFVGTK+ AR +A EA R GMP+++ RWLGG+LTNFKTIK SI RLKE++ +G++
Sbjct: 68 LFVGTKKAARKAVAEEAKRCGMPYVNHRWLGGMLTNFKTIKKSINRLKELEAMKADGTLY 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++ SKKEAL R+ KL R +GGIK+M PDAIF++DVGY K A+ EA KL IP+IGV
Sbjct: 128 QRFSKKEALGMERELEKLERSLGGIKDMRGTPDAIFVLDVGYEKNAIMEAKKLGIPVIGV 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTK 382
VD+N+SPD ++YVIPGNDDS +++ LY +
Sbjct: 188 VDSNNSPDNVDYVIPGNDDSIRAVTLYCQ 216
>gi|187928369|ref|YP_001898856.1| uridylate kinase [Ralstonia pickettii 12J]
gi|241662945|ref|YP_002981305.1| uridylate kinase [Ralstonia pickettii 12D]
gi|309782135|ref|ZP_07676865.1| UMP kinase [Ralstonia sp. 5_7_47FAA]
gi|404377828|ref|ZP_10982928.1| uridylate kinase [Ralstonia sp. 5_2_56FAA]
gi|187725259|gb|ACD26424.1| uridylate kinase [Ralstonia pickettii 12J]
gi|240864972|gb|ACS62633.1| uridylate kinase [Ralstonia pickettii 12D]
gi|308919201|gb|EFP64868.1| UMP kinase [Ralstonia sp. 5_7_47FAA]
gi|348612951|gb|EGY62556.1| uridylate kinase [Ralstonia sp. 5_2_56FAA]
Length = 236
Score = 275 bits (702), Expect = 1e-70, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDIAEIVKLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + + V SA+ +++ +E YI AI+ LEEGK+VIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANLEGRVQSALRLDQVVEPYIRPRAIRQLEEGKIVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y ITFDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTITFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K GALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIQKPGALKRVILGEDEGTLVH 235
>gi|381159781|ref|ZP_09869013.1| ribosomal protein S2 [Thiorhodovibrio sp. 970]
gi|380877845|gb|EIC19937.1| ribosomal protein S2 [Thiorhodovibrio sp. 970]
Length = 270
Score = 275 bits (702), Expect = 1e-70, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAGVHFGHQTR+WNPKM +YIFGHRNKIHIINLE+TL +++ A+ Y+ +L + G +
Sbjct: 21 QMLQAGVHFGHQTRYWNPKMGAYIFGHRNKIHIINLERTLPLFQDAMNYLGKLASNGGRI 80
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A + EA R GMP+++ RWLGG+LTNF+T++ SIQRLKE++ +GSI
Sbjct: 81 LFVGTKRAAHDPVREEAQRCGMPYVNHRWLGGMLTNFQTVRKSIQRLKELEAMFEDGSIE 140
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL R++ KL+ +GGIKNM +PDA+F+IDVG+ + A++EA KL IPI+GVV
Sbjct: 141 RFGKKEALTLSRERDKLDLSLGGIKNMANLPDALFVIDVGHERIAITEANKLGIPIVGVV 200
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++YVIPGNDD+ +++ LY + A LD +
Sbjct: 201 DTNNDPGSVDYVIPGNDDAIRAVRLYIESAASAILDGR 238
>gi|319945439|ref|ZP_08019699.1| stringent starvation protein A [Lautropia mirabilis ATCC 51599]
gi|319741225|gb|EFV93652.1| stringent starvation protein A [Lautropia mirabilis ATCC 51599]
Length = 204
Score = 275 bits (702), Expect = 1e-70, Method: Composition-based stats.
Identities = 121/179 (67%), Positives = 156/179 (87%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+NKP++I MNPYGQVP+LVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDLYNKPEDISIMNPYGQVPVLVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLE-NERNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
+MRAR RL L NFE+E+F+H+ LE + +K + + +RAR +IR+RL L P+F+KN++
Sbjct: 85 VMRARTRLFLFNFERELFVHVQTLERRDHDKDTARTMERARTQIRERLTQLTPIFVKNRF 144
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
MLGDEFSMLDV +APLLWRLD+Y I + K+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 MLGDEFSMLDVAMAPLLWRLDHYSIEMPKTAAPLMKYAERIFSRPAYIEALTPSEKVMR 203
>gi|407716271|ref|YP_006837551.1| 30S ribosomal protein S2 [Cycloclasticus sp. P1]
gi|407256607|gb|AFT67048.1| 30S ribosomal protein S2 [Cycloclasticus sp. P1]
Length = 265
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 164/219 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ +I +L +KGT+
Sbjct: 8 EMLEAGVHFGHQTRYWNPKMAPYIFGERGKIHIINLEKTLPLFNDALNFINKLAANKGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTK+ AR +A EA R MP++D RWLGG+LTNF TIK SI RLKE++ +GS+
Sbjct: 68 MFVGTKKAARKTVAEEAKRCSMPYVDHRWLGGMLTNFGTIKKSINRLKELETMREDGSLN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ SKKE L F R+ KL R +GGIK++ PDAI ++DVGY K AV EA KL IP+IG+V
Sbjct: 128 RFSKKEGLKFMRQLEKLERSVGGIKDLKGPPDAIVVMDVGYEKIAVKEAAKLGIPVIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+N+ P+ ++YVIPGNDDS +++ LY + A L+ K
Sbjct: 188 DSNNKPNDVDYVIPGNDDSIRALTLYCQSFAGAILEGKA 226
>gi|145589630|ref|YP_001156227.1| uridylate kinase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048036|gb|ABP34663.1| uridylate kinase [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 236
Score = 274 bits (701), Expect = 2e-70, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN I +++EI+++V+ G+ELAIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINPITIDAMVAEIAQVVNSGVELAIVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D L + G+ + V SA+ +++ +E YI AI+ + EGKVVIFA G
Sbjct: 73 YMGMLATMMNSLALQDALRQKGVEARVQSALRMDQVVEPYIRPRAIRAMGEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ EI+LKATKVDGIY++DP K +A +YK ITFDE + K L
Sbjct: 133 TGNPFFTTDTAAALRGAEMGVEIMLKATKVDGIYSADPVKDPAATLYKTITFDEALIKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRD+KLPI+VFSI+K GAL RV++G++EGTLV+
Sbjct: 193 QVMDATAFALCRDRKLPIKVFSILKPGALMRVVQGESEGTLVH 235
>gi|334144061|ref|YP_004537217.1| 30S ribosomal protein S2 [Thioalkalimicrobium cyclicum ALM1]
gi|333964972|gb|AEG31738.1| ribosomal protein S2 [Thioalkalimicrobium cyclicum ALM1]
Length = 247
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 166/220 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTR+WNPKM YIFG RNKIHI+NLEKTL M+ A+ + + +KG +
Sbjct: 8 QMLEAGCHFGHQTRYWNPKMGQYIFGARNKIHIVNLEKTLPMFNDALNFAGSVVANKGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR V+A EA R GMP+++ RWLGG+LTNFKTIK SI+RLKE++ +G+
Sbjct: 68 LFVGTKRAAREVVAQEANRCGMPYVNHRWLGGMLTNFKTIKQSIKRLKELESMEQDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++K+E L R+ KL +GGIK+M +PDAIF+ID G A+ EA KL IP+IGVV
Sbjct: 128 KITKREVLTLTREMEKLELSLGGIKDMRAMPDAIFVIDTGNEDIAILEAKKLGIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
DTN++PDG++YVIPGNDD+ ++I LY + + DA L+AK
Sbjct: 188 DTNNNPDGVDYVIPGNDDAIRAIKLYLESMADAVLEAKAT 227
>gi|345865280|ref|ZP_08817468.1| 30S ribosomal protein S2 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345876938|ref|ZP_08828698.1| methionine aminopeptidase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226046|gb|EGV52389.1| methionine aminopeptidase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345123609|gb|EGW53501.1| 30S ribosomal protein S2 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 249
Score = 274 bits (700), Expect = 2e-70, Method: Composition-based stats.
Identities = 127/219 (57%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKMS YIFGHRNKIHI+NLEKTL +Y A+ YI L + G +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSLSANGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI- 293
LFVGTKR AR + EA R GMPF++ RWLGG+LTNFKTIK SI+RLKE++ +GS+
Sbjct: 68 LFVGTKRAARDAVREEAQRCGMPFVNHRWLGGMLTNFKTIKQSIKRLKELEAMFEDGSVE 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++ +KKE L R+ KL+R IGGIK+M +PDA+F+IDVG AV+EA KL IP++GV
Sbjct: 128 QRFNKKEGLGLKREMEKLDRSIGGIKDMGGLPDAMFVIDVGNENIAVAEARKLGIPVVGV 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN+ PD I+YVIPGNDD+ +++ L+ +G A L+ +
Sbjct: 188 VDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEGR 226
>gi|406940479|gb|EKD73226.1| hypothetical protein ACD_45C00396G0004 [uncultured bacterium]
Length = 261
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 167/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQT WNPKM++YIFG RNKIHIINLEKT+ + E A+ ++ + KG +L
Sbjct: 10 MLKAGVHFGHQTCHWNPKMATYIFGARNKIHIINLEKTVPLMEDALNFMGGIAAKKGKIL 69
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTK A+ +I EA+R MP+++ RWLGG+LTN+KTI+ SI+RLKE++ S +
Sbjct: 70 FVGTKPAAQEIIKEEAMRCYMPYVNHRWLGGMLTNYKTIRQSIKRLKELEAMFEKSSFGR 129
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L R + KL R +GGIKNM +PDA+F++DVG+ K AV+EA +L IP+IG+VD
Sbjct: 130 LTKKEILNLTRDKAKLERSLGGIKNMGGLPDALFVVDVGHEKIAVAEANRLGIPVIGIVD 189
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN+SP+GINY+IPGNDDS +SI LYTK + D LDA+
Sbjct: 190 TNNSPEGINYIIPGNDDSLRSIQLYTKTVADCILDARA 227
>gi|406904119|gb|EKD45997.1| hypothetical protein ACD_69C00052G0001 [uncultured bacterium]
Length = 327
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 171/218 (78%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ RFWNPKM+ YIFG ++KIHII+LEKTL MY+ A+ ++ + KG +
Sbjct: 8 QMLEAGVHFGHQVRFWNPKMAPYIFGIKSKIHIIDLEKTLPMYKHAVNFLGSVAAKKGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QAR ++ EA R MP++D RWLGG+LTN+KTI+ S++RLKE++ + +
Sbjct: 68 LFVGTKQQARALVRAEAERCRMPYVDFRWLGGMLTNYKTIRQSLKRLKELEDLRDSATFV 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L+KKEAL R+ KL R +GGI++M +PDA+F++DVG+ K AV+EA KL IPI+G+V
Sbjct: 128 RLAKKEALSIMREITKLERSLGGIRDMGGLPDALFVLDVGHEKIAVTEAAKLKIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ PD I+Y+IPGNDDS ++I LY +G+ DA +DA+
Sbjct: 188 DTNNIPDNIDYIIPGNDDSIRAIKLYLQGVADAIIDAR 225
>gi|348618594|ref|ZP_08885115.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816147|emb|CCD29907.1| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 239
Score = 273 bits (699), Expect = 3e-70, Method: Composition-based stats.
Identities = 126/223 (56%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN + I+ I+++I+E+V G +LA+VIGGGNI RG++ +DR+TAD
Sbjct: 16 GEALMGDDAFGINRATIERIVADIAEVVQLGTQLAVVIGGGNIFRGVAGGAAGMDRATAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGML T+IN+LAL D + ++GI + V SA+ +++ E YI AI +L+ GKVVIFA G
Sbjct: 76 YMGMLGTMINALALQDAMRQTGIEARVQSALRMDQVAEPYIRPRAIHHLKAGKVVIFAAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AE++LKAT+VDG+Y++DP + +A Y I FDE I + L
Sbjct: 136 TGNPFFTTDTAAALRGAEIGAEVVLKATRVDGVYSADPKRAPTASRYAMIRFDEAIQRNL 195
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLP+RVFSI K+GALKR+++G++EGTL++
Sbjct: 196 QVMDATAFALCRDQKLPVRVFSINKTGALKRIMDGQDEGTLIH 238
>gi|146281911|ref|YP_001172064.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501]
gi|339493518|ref|YP_004713811.1| 30S ribosomal protein S2 [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020182|ref|YP_005938206.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 4166]
gi|166226743|sp|A4VJS1.1|RS2_PSEU5 RecName: Full=30S ribosomal protein S2
gi|145570116|gb|ABP79222.1| 30S ribosomal protein S2 [Pseudomonas stutzeri A1501]
gi|327480154|gb|AEA83464.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 4166]
gi|338800890|gb|AEJ04722.1| 30S ribosomal protein S2 [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 246
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 166/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|421617886|ref|ZP_16058868.1| 30S ribosomal protein S2 [Pseudomonas stutzeri KOS6]
gi|409780131|gb|EKN59774.1| 30S ribosomal protein S2 [Pseudomonas stutzeri KOS6]
Length = 246
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 167/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEVQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA + + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVMRGRQNG 228
>gi|452747342|ref|ZP_21947139.1| 30S ribosomal protein S2 [Pseudomonas stutzeri NF13]
gi|452008863|gb|EME01099.1| 30S ribosomal protein S2 [Pseudomonas stutzeri NF13]
Length = 246
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 167/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEVQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F++DV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDAMFVVDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|418295714|ref|ZP_12907564.1| 30S ribosomal protein S2 [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067047|gb|EHY79790.1| 30S ribosomal protein S2 [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 246
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 168/220 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F++DV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDAMFVVDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|83749796|ref|ZP_00946770.1| Uridylate kinase [Ralstonia solanacearum UW551]
gi|207743242|ref|YP_002259634.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum IPO1609]
gi|300704229|ref|YP_003745832.1| uridylate kinase [Ralstonia solanacearum CFBP2957]
gi|386333613|ref|YP_006029783.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum Po82]
gi|421888315|ref|ZP_16319415.1| uridylate kinase [Ralstonia solanacearum K60-1]
gi|421897349|ref|ZP_16327717.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum MolK2]
gi|83723553|gb|EAP70757.1| Uridylate kinase [Ralstonia solanacearum UW551]
gi|206588555|emb|CAQ35518.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum MolK2]
gi|206594639|emb|CAQ61566.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum IPO1609]
gi|299071893|emb|CBJ43222.1| uridylate kinase [Ralstonia solanacearum CFBP2957]
gi|334196062|gb|AEG69247.1| uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase)
protein [Ralstonia solanacearum Po82]
gi|378966354|emb|CCF96163.1| uridylate kinase [Ralstonia solanacearum K60-1]
Length = 236
Score = 273 bits (697), Expect = 5e-70, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDIAEIVRLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHASIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K ALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIQKPNALKRVIMGEDEGTLVH 235
>gi|121998248|ref|YP_001003035.1| 30S ribosomal protein S2 [Halorhodospira halophila SL1]
gi|166225278|sp|A1WX21.1|RS2_HALHL RecName: Full=30S ribosomal protein S2
gi|121589653|gb|ABM62233.1| SSU ribosomal protein S2P [Halorhodospira halophila SL1]
Length = 247
Score = 273 bits (697), Expect = 5e-70, Method: Composition-based stats.
Identities = 123/218 (56%), Positives = 168/218 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM YIFG RNKIHIINLEKTL +Y+ A+ + +L + G +
Sbjct: 8 QMLEAGVHFGHQTRFWDPKMRPYIFGERNKIHIINLEKTLPLYKDALNFAGRLASNGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++ A R GMP++D RWLGG++TNF+T+K SI RLK+++ +G+
Sbjct: 68 LFVGTKRPARELVREHAARCGMPYVDHRWLGGMMTNFRTVKHSIARLKDLETQAEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++K+EAL R++ KL+R + GIKNM +PDA+F++DVGY A+SEA KL IP+IGVV
Sbjct: 128 KVTKREALALSREREKLDRSLSGIKNMERLPDAMFVVDVGYEHIAISEAKKLGIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN SP ++YVIPGNDD+ ++I LY GI DA ++AK
Sbjct: 188 DTNCSPREVDYVIPGNDDAIRAIELYVSGIADAVIEAK 225
>gi|389870807|ref|YP_006378226.1| stringent starvation protein A [Advenella kashmirensis WT001]
gi|388536056|gb|AFK61244.1| stringent starvation protein A [Advenella kashmirensis WT001]
Length = 203
Score = 273 bits (697), Expect = 5e-70, Method: Composition-based stats.
Identities = 125/178 (70%), Positives = 154/178 (86%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+RDIDLFNKP++I MNPYG+VPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEVRDIDLFNKPEDISVMNPYGRVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFEKE+F+H+ +LE+ ++ K + AR IRDRL LAPL +KN+YM
Sbjct: 85 VMRARTRLFLHNFEKELFVHVGVLEDRSARSDEKKLENARRMIRDRLSQLAPLLIKNRYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV +APLLWRLD+YGI L K+A+P+ KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 LGEEFSMLDVTMAPLLWRLDHYGIELPKNAAPIQKYAERIFSRPAYIEALTPSEKVMR 202
>gi|350561742|ref|ZP_08930580.1| ribosomal protein S2 [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780774|gb|EGZ35092.1| ribosomal protein S2 [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 246
Score = 272 bits (696), Expect = 5e-70, Method: Composition-based stats.
Identities = 120/224 (53%), Positives = 171/224 (76%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S ++++AGVHFGHQTR+W+PKM+ YIFG RNKIHIINLEKTL ++ A+ ++ ++
Sbjct: 2 SFVTMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKTLPLFNDAMNFLGKVA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G ++FVGTKR AR V+ EA R GMP+++ RWLGG+LTNF T+K SI+RLK+++
Sbjct: 62 ADGGKIMFVGTKRSAREVVGEEARRCGMPYVNHRWLGGMLTNFSTVKQSIKRLKDIEAMR 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+GSI +L+KKE L+ R+Q KL R +GGIK+MN +PDA+F+IDVGY K A++EA K I
Sbjct: 122 GDGSIERLNKKEGLMLVREQDKLERSLGGIKDMNRMPDAMFVIDVGYEKIAIAEAKKRGI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
P++ +VD+N+SP+G+ YV+PGNDD+ ++I LY I D ++AK
Sbjct: 182 PVVAIVDSNNSPEGVEYVVPGNDDAMRAIQLYVAAIADTIIEAK 225
>gi|220934333|ref|YP_002513232.1| 30S ribosomal protein S2 [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254764498|sp|B8GPS8.1|RS2_THISH RecName: Full=30S ribosomal protein S2
gi|219995643|gb|ACL72245.1| ribosomal protein S2 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 275
Score = 272 bits (696), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 170/214 (79%), Gaps = 1/214 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T ++++AGVHFGHQTR+WNPKM+ +IFG RNKIHIINLE+TL ++ A+ Y+ +
Sbjct: 1 MSSVT-MRQMLEAGVHFGHQTRYWNPKMAPFIFGERNKIHIINLEQTLPLFNDAMNYLGK 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L + G +LFVGTKR AR IA EA+R MP+++ RWLGG+LTNFKT++ SI+RLK+++L
Sbjct: 60 LAGNGGKILFVGTKRSARDTIAEEALRCKMPYVNHRWLGGMLTNFKTVRESIRRLKDLEL 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+ +LSKKEAL+ R+ KL R +GGIK+MN +PDA+F+IDVGY K AV EA KL
Sbjct: 120 MREDGTFNRLSKKEALMRTRELEKLERSLGGIKDMNGLPDAMFVIDVGYEKIAVKEANKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALY 380
IP+I VVDTN+S +G++YVIPGNDD+ ++I LY
Sbjct: 180 GIPVIAVVDTNNSIEGVDYVIPGNDDAMRAIQLY 213
>gi|226200105|ref|ZP_03795651.1| UMP kinase [Burkholderia pseudomallei Pakistan 9]
gi|403519178|ref|YP_006653312.1| uridylate kinase [Burkholderia pseudomallei BPC006]
gi|424903699|ref|ZP_18327212.1| uridylate kinase [Burkholderia thailandensis MSMB43]
gi|225927789|gb|EEH23830.1| UMP kinase [Burkholderia pseudomallei Pakistan 9]
gi|390931572|gb|EIP88973.1| uridylate kinase [Burkholderia thailandensis MSMB43]
gi|403074821|gb|AFR16401.1| uridylate kinase [Burkholderia pseudomallei BPC006]
Length = 220
Score = 272 bits (696), Expect = 6e-70, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 172/219 (78%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TADYMGM
Sbjct: 1 MGDDAFGINRATIERMVADIAEVVRLGTQLAVVIGGGNIFRGVAGGAAGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
LAT++N+LAL D + +GI + V SA+ +++ +E YI AI+ LEEGKVVIFA G GNP
Sbjct: 61 LATMMNALALQDAMRHAGIEARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR +E+ AE++LKATKVDG+Y++DP K SA Y I+FDE I + L++MD
Sbjct: 121 FFTTDTAAALRGSEVGAEVVLKATKVDGVYSADPKKDPSATRYSSISFDEAIGRNLQVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPIRVFSI K GALKR+++G++EGTLV+
Sbjct: 181 ATAFALCRDQKLPIRVFSINKPGALKRIVQGEDEGTLVH 219
>gi|350552487|ref|ZP_08921687.1| ribosomal protein S2 [Thiorhodospira sibirica ATCC 700588]
gi|349794026|gb|EGZ47849.1| ribosomal protein S2 [Thiorhodospira sibirica ATCC 700588]
Length = 258
Score = 272 bits (696), Expect = 7e-70, Method: Composition-based stats.
Identities = 126/241 (52%), Positives = 177/241 (73%), Gaps = 3/241 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RNKIHIINLEKTL ++ A+ Y+ +L + G +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIINLEKTLPLFNDAMNYLGKLASNGGRV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR IA EA R MP+++ RWLGG+LTNFKT++ SI+RLK+++ +G+
Sbjct: 68 LFVGTKRSARDCIAEEAKRCKMPYVNHRWLGGMLTNFKTVRQSIKRLKDLETMRDDGTFA 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKE L+ R+ KL R +GGIK+M +PDA+F+IDVGY + A++EA KL IP++ VV
Sbjct: 128 RLSKKEVLMLTREMEKLERSLGGIKDMPALPDALFVIDVGYERIAINEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV---GELRSKTLAPIMECKKA 411
DTN+SP G++YVIPGNDD+ ++I LY DA L+ +T G +R+ + + A
Sbjct: 188 DTNNSPLGVDYVIPGNDDAMRAIQLYVSAAADAVLEGRTTARAGSVRADEFVEVDDDSAA 247
Query: 412 L 412
L
Sbjct: 248 L 248
>gi|91775881|ref|YP_545637.1| uridylate kinase [Methylobacillus flagellatus KT]
gi|123078855|sp|Q1H141.1|PYRH_METFK RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|91709868|gb|ABE49796.1| uridylate kinase [Methylobacillus flagellatus KT]
Length = 238
Score = 272 bits (696), Expect = 7e-70, Method: Composition-based stats.
Identities = 132/222 (59%), Positives = 168/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN + I I+ EI E+V G+E+A+VIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGDDSYGINRATISRIVEEIKEVVDLGVEVAVVIGGGNIFRGVAPAAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + G++S V SA++IE+ E YI AI+YLEEG+VVIF G
Sbjct: 75 YMGMLATVMNALALQDAMRHIGLVSRVQSALNIEQVAEPYIRGKAIRYLEEGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR EI AEI+LKATKVDG+Y DP + A+ YK +TFDE I K L
Sbjct: 135 TGNPFFTTDTAAALRGMEINAEIVLKATKVDGVYTDDPKRNPEAMRYKTLTFDEAIVKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI + GALKRV+ G++EGT V
Sbjct: 195 KVMDATALTLCRDQKLPISVFSIFRQGALKRVVLGEDEGTRV 236
>gi|402699409|ref|ZP_10847388.1| 30S ribosomal protein S2 [Pseudomonas fragi A22]
Length = 247
Score = 272 bits (696), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEATRCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEIQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIKGR 225
>gi|406915583|gb|EKD54651.1| hypothetical protein ACD_60C00060G0019 [uncultured bacterium]
Length = 259
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 166/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQT WNPKM++YIFG RNKIHIINLEKT+ M A+ +I + KG +L
Sbjct: 10 MLKAGVHFGHQTCHWNPKMAAYIFGARNKIHIINLEKTVPMMSDALNFIGGIASKKGKIL 69
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTK A+ ++ EA+R MP+++ RWLGG+LTN+KTI+ SI+RLKE++ S +
Sbjct: 70 FVGTKPAAQEILKAEAIRCHMPYVNHRWLGGMLTNYKTIRQSIRRLKELEAMFEKSSFGR 129
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L R + KL R +GGIKNM +PDA+F+IDVG+ K AV+EA +L+IP+IG+VD
Sbjct: 130 LTKKEILNLTRDKTKLERSLGGIKNMGGLPDALFVIDVGHEKIAVAEANRLSIPVIGIVD 189
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN++P G++YVIPGNDDS +SI LYTK + D LDA+
Sbjct: 190 TNNNPAGVDYVIPGNDDSLRSIQLYTKAVADCILDARA 227
>gi|409393663|ref|ZP_11244963.1| 30S ribosomal protein S2 [Pseudomonas sp. Chol1]
gi|409393806|ref|ZP_11245089.1| 30S ribosomal protein S2 [Pseudomonas sp. Chol1]
gi|409121644|gb|EKM97710.1| 30S ribosomal protein S2 [Pseudomonas sp. Chol1]
gi|409121805|gb|EKM97867.1| 30S ribosomal protein S2 [Pseudomonas sp. Chol1]
Length = 246
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ +++ LY + DA L +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGR 225
>gi|28868740|ref|NP_791359.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969118|ref|ZP_03397257.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1]
gi|301383987|ref|ZP_07232405.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato Max13]
gi|302061959|ref|ZP_07253500.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato K40]
gi|302134054|ref|ZP_07260044.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422297486|ref|ZP_16385121.1| 30S ribosomal protein S2 [Pseudomonas avellanae BPIC 631]
gi|422587020|ref|ZP_16661691.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|422657760|ref|ZP_16720199.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|38258313|sp|Q886P3.1|RS2_PSESM RecName: Full=30S ribosomal protein S2
gi|28851979|gb|AAO55054.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926116|gb|EEB59672.1| ribosomal protein S2 [Pseudomonas syringae pv. tomato T1]
gi|330872739|gb|EGH06888.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|331016367|gb|EGH96423.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|407991088|gb|EKG33027.1| 30S ribosomal protein S2 [Pseudomonas avellanae BPIC 631]
Length = 247
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|422594801|ref|ZP_16669091.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985108|gb|EGH83211.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 247
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMASMADAVIRGR 225
>gi|300691602|ref|YP_003752597.1| uridylate kinase [Ralstonia solanacearum PSI07]
gi|299078662|emb|CBJ51320.1| uridylate kinase [Ralstonia solanacearum PSI07]
gi|344169912|emb|CCA82281.1| uridylate kinase [blood disease bacterium R229]
gi|344171466|emb|CCA84078.1| uridylate kinase [Ralstonia syzygii R24]
Length = 236
Score = 272 bits (695), Expect = 8e-70, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++++EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDVAEIVRLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K ALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIQKPNALKRVIMGEDEGTLVH 235
>gi|395500380|ref|ZP_10431959.1| 30S ribosomal protein S2 [Pseudomonas sp. PAMC 25886]
gi|395648133|ref|ZP_10435983.1| 30S ribosomal protein S2 [Pseudomonas extremaustralis 14-3 substr.
14-3b]
gi|395794805|ref|ZP_10474122.1| 30S ribosomal protein S2 [Pseudomonas sp. Ag1]
gi|398936501|ref|ZP_10667002.1| ribosomal protein S2 [Pseudomonas sp. GM41(2012)]
gi|421143788|ref|ZP_15603720.1| 30S ribosomal protein S2 [Pseudomonas fluorescens BBc6R8]
gi|395341074|gb|EJF72898.1| 30S ribosomal protein S2 [Pseudomonas sp. Ag1]
gi|398167813|gb|EJM55850.1| ribosomal protein S2 [Pseudomonas sp. GM41(2012)]
gi|404505049|gb|EKA19087.1| 30S ribosomal protein S2 [Pseudomonas fluorescens BBc6R8]
Length = 245
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|17546125|ref|NP_519527.1| uridylate kinase [Ralstonia solanacearum GMI1000]
gi|22653981|sp|Q8XZI9.1|PYRH_RALSO RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|17428421|emb|CAD15108.1| probable uridylate kinase (uk) (uridine monophosphate kinase)
(umpkinase) protein [Ralstonia solanacearum GMI1000]
gi|299067461|emb|CBJ38660.1| uridylate kinase [Ralstonia solanacearum CMR15]
Length = 236
Score = 272 bits (695), Expect = 9e-70, Method: Composition-based stats.
Identities = 133/223 (59%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN S I+ ++++I+EIV G+++A+VIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINRSTIEGMVNDIAEIVRLGVQVAVVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + + I V SA+ +++ +E YI AI+ LEEGKVVIFA G
Sbjct: 73 YMGMLATMMNALALQDAMRHANIEGRVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI AEI+LKATKVDG+Y +DP K SA Y I+FDE IS+ L
Sbjct: 133 TGNPFFTTDTAAALRGSEIGAEIVLKATKVDGVYTADPKKDPSATRYTTISFDEAISRNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQKLPI+VFSI K ALKRVI G++EGTLV+
Sbjct: 193 QVMDATAFALCRDQKLPIKVFSIQKPNALKRVIMGEDEGTLVH 235
>gi|398917468|ref|ZP_10658171.1| ribosomal protein S2 [Pseudomonas sp. GM49]
gi|398172862|gb|EJM60714.1| ribosomal protein S2 [Pseudomonas sp. GM49]
Length = 245
Score = 272 bits (695), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|88812377|ref|ZP_01127627.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231]
gi|88790384|gb|EAR21501.1| ribosomal protein S2 [Nitrococcus mobilis Nb-231]
Length = 256
Score = 272 bits (695), Expect = 9e-70, Method: Composition-based stats.
Identities = 122/221 (55%), Positives = 169/221 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+W+PKM+ YIFG RNKIHI+NLEKTL +Y++A+ Y+ +L + G +
Sbjct: 8 QMLEAGVHFGHQTRYWDPKMAPYIFGQRNKIHIVNLEKTLPLYDEAMNYLGRLAANGGRI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR + EAVR MP+++ RWLGG+LTNF+T+K SI+R K++ +G+
Sbjct: 68 LFVGTKRAAREALREEAVRCAMPYVNHRWLGGMLTNFRTVKRSIRRYKDLQQQEKDGTFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSK+E L +R+ KL R GGI +M +PDA+F+ID G+ + AV EA KLNIP++ VV
Sbjct: 128 KLSKREVLSLHREMGKLERAFGGIVDMEALPDALFVIDTGFERIAVLEARKLNIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN+SP I+YVIPGNDD+ +++ LY KG DA +DA+ VG
Sbjct: 188 DTNNSPRAIDYVIPGNDDAFRAVRLYLKGAADAIIDARMVG 228
>gi|398930980|ref|ZP_10664911.1| ribosomal protein S2 [Pseudomonas sp. GM48]
gi|398957200|ref|ZP_10677150.1| ribosomal protein S2 [Pseudomonas sp. GM33]
gi|426408001|ref|YP_007028100.1| ribosomal protein S2 [Pseudomonas sp. UW4]
gi|398148647|gb|EJM37317.1| ribosomal protein S2 [Pseudomonas sp. GM33]
gi|398164503|gb|EJM52639.1| ribosomal protein S2 [Pseudomonas sp. GM48]
gi|426266218|gb|AFY18295.1| ribosomal protein S2 [Pseudomonas sp. UW4]
Length = 245
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|398892826|ref|ZP_10645781.1| ribosomal protein S2 [Pseudomonas sp. GM55]
gi|398184927|gb|EJM72353.1| ribosomal protein S2 [Pseudomonas sp. GM55]
Length = 245
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|374623044|ref|ZP_09695561.1| 30S ribosomal protein S2 [Ectothiorhodospira sp. PHS-1]
gi|373942162|gb|EHQ52707.1| 30S ribosomal protein S2 [Ectothiorhodospira sp. PHS-1]
Length = 253
Score = 271 bits (694), Expect = 1e-69, Method: Composition-based stats.
Identities = 121/221 (54%), Positives = 170/221 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFGHRNKIHIINLEKT+ ++ A+ Y+ ++ + G +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMDQYIFGHRNKIHIINLEKTVPLFNDAMNYLGKMSANGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR AR ++A A R MP+++ RWLGG+LTNFKT++ SI+RLKE++ +G++
Sbjct: 68 MFVGTKRSARDLVAEHAQRCKMPYVNHRWLGGMLTNFKTVRESIRRLKELETMKEDGTLN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKEAL+ R+ KL R +GGIK+M +PDA+F+IDVGY + A+SEA KL IP++ VV
Sbjct: 128 RLSKKEALMRTREMEKLERSLGGIKDMPGLPDAMFVIDVGYERIAISEARKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
D+N+SP+G++YVIPGNDD+ ++I LY DA D V
Sbjct: 188 DSNNSPEGVDYVIPGNDDAMRAIQLYLAAAADAVCDGLNVA 228
>gi|229588803|ref|YP_002870922.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25]
gi|387892454|ref|YP_006322751.1| 30S ribosomal protein S2 [Pseudomonas fluorescens A506]
gi|388469483|ref|ZP_10143692.1| ribosomal protein S2 [Pseudomonas synxantha BG33R]
gi|398998508|ref|ZP_10701281.1| ribosomal protein S2 [Pseudomonas sp. GM21]
gi|408483318|ref|ZP_11189537.1| 30S ribosomal protein S2 [Pseudomonas sp. R81]
gi|423690337|ref|ZP_17664857.1| ribosomal protein S2 [Pseudomonas fluorescens SS101]
gi|440737195|ref|ZP_20916768.1| 30S ribosomal protein S2 [Pseudomonas fluorescens BRIP34879]
gi|447915636|ref|YP_007396204.1| 30S ribosomal protein S2 [Pseudomonas poae RE*1-1-14]
gi|259495221|sp|C3K5E6.1|RS2_PSEFS RecName: Full=30S ribosomal protein S2
gi|229360669|emb|CAY47527.1| 30S ribosomal protein S2 [Pseudomonas fluorescens SBW25]
gi|387161501|gb|AFJ56700.1| ribosomal protein S2 [Pseudomonas fluorescens A506]
gi|387998679|gb|EIK60008.1| ribosomal protein S2 [Pseudomonas fluorescens SS101]
gi|388006180|gb|EIK67446.1| ribosomal protein S2 [Pseudomonas synxantha BG33R]
gi|398120213|gb|EJM09880.1| ribosomal protein S2 [Pseudomonas sp. GM21]
gi|440382377|gb|ELQ18881.1| 30S ribosomal protein S2 [Pseudomonas fluorescens BRIP34879]
gi|445199499|gb|AGE24708.1| 30S ribosomal protein S2 [Pseudomonas poae RE*1-1-14]
Length = 245
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|422651059|ref|ZP_16713858.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964141|gb|EGH64401.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 247
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKKKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|71737096|ref|YP_275978.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257487084|ref|ZP_05641125.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|289626035|ref|ZP_06458989.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651448|ref|ZP_06482791.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str.
2250]
gi|416018070|ref|ZP_11565071.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
B076]
gi|416025725|ref|ZP_11569373.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422404696|ref|ZP_16481747.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422582743|ref|ZP_16657876.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|422679934|ref|ZP_16738207.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|123761192|sp|Q48F59.1|RS2_PSE14 RecName: Full=30S ribosomal protein S2
gi|71557649|gb|AAZ36860.1| ribosomal protein S2 [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298157154|gb|EFH98242.1| SSU ribosomal protein S2p (SAe) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320323120|gb|EFW79209.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320329608|gb|EFW85597.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867583|gb|EGH02292.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330878190|gb|EGH12339.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|331009281|gb|EGH89337.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 247
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|422645650|ref|ZP_16708785.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959199|gb|EGH59459.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 247
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 168/218 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGRS 226
>gi|375104592|ref|ZP_09750853.1| glutathione S-transferase [Burkholderiales bacterium JOSHI_001]
gi|374665323|gb|EHR70108.1| glutathione S-transferase [Burkholderiales bacterium JOSHI_001]
Length = 204
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 155/179 (86%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF KP++I MNPY +VPILVERDLILYES+IINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERN-KTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
+ RAR RL L NFEKE+F H+ +LE K + K ++AR +IRDRL TLAP+FLKNK+
Sbjct: 85 VARARVRLFLFNFEKELFAHVNILEGRGGAKGNDKQLEKARNQIRDRLTTLAPIFLKNKF 144
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
MLGD+FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 MLGDDFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 203
>gi|430761257|ref|YP_007217114.1| SSU ribosomal protein S2p (SAe) [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430010881|gb|AGA33633.1| SSU ribosomal protein S2p (SAe) [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 246
Score = 271 bits (693), Expect = 1e-69, Method: Composition-based stats.
Identities = 120/224 (53%), Positives = 172/224 (76%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S ++++AGVHFGHQTR+W+PKM+ YIFG RNKIHIINLEKTL ++ A+ ++ ++
Sbjct: 2 SFVTMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKTLPLFNDAMNFVGKVA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G ++FVGTKR AR V+ EA R GMP+++ RWLGG+LTNF T+K SI+RLK+++
Sbjct: 62 ADGGKIMFVGTKRSAREVVGEEARRCGMPYVNHRWLGGMLTNFSTVKQSIKRLKDIEAMR 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+GSI +L+KKE L+ R+Q KL R +GGIK+MN +PD +F+IDVGY K AV+EA K +I
Sbjct: 122 ADGSIDRLNKKEGLMLIREQDKLERSLGGIKDMNRMPDVMFVIDVGYEKIAVAEAKKRSI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
P++ +VD+N+SP+G++YVIPGNDD+ ++I LY + D ++AK
Sbjct: 182 PVVAIVDSNNSPEGVDYVIPGNDDAMRAIQLYVAAVADTIVEAK 225
>gi|54294597|ref|YP_127012.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens]
gi|61215398|sp|Q5WVY7.1|RS2_LEGPL RecName: Full=30S ribosomal protein S2
gi|53754429|emb|CAH15913.1| 30S ribosomal protein S2 [Legionella pneumophila str. Lens]
gi|307610409|emb|CBW99979.1| 30S ribosomal protein S2 [Legionella pneumophila 130b]
Length = 254
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNPKMS YIFG RNKIHIINLEKTL M Y+ +L +K +
Sbjct: 8 ELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANKAKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 68 LFVGTKRAAQDSIREHARRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 128 DMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKT 401
DTN+SPD I+YVIPGNDDS +++ +Y + + DA LD K TVG + S +
Sbjct: 188 DTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDS 237
>gi|254448771|ref|ZP_05062228.1| ribosomal protein S2 [gamma proteobacterium HTCC5015]
gi|198261612|gb|EDY85900.1| ribosomal protein S2 [gamma proteobacterium HTCC5015]
Length = 307
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 166/223 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM YIFG RNKIHIINLEKT+ +++ A+ Y+ ++ G +
Sbjct: 8 QMLEAGVHFGHQTRFWNPKMGQYIFGERNKIHIINLEKTMPLFDDAMNYLSKMASQNGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++ EA RAGMP++DQRWLGG+LTNF T+K SI+RLK+++ + +G+
Sbjct: 68 LFVGTKRAARDIVREEAQRAGMPYVDQRWLGGMLTNFPTVKKSIRRLKDIEEQLKDGTAE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L+KKE LL R+ KL R +GGI++M +PD +FI+D GY K AV+EA+KL IP++ VV
Sbjct: 128 HLNKKETLLMTREADKLERSLGGIRDMERLPDCLFIVDNGYEKIAVNEAVKLGIPVVSVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
DTN+ I+Y IPGNDD+ ++I LY DA L+ + ++
Sbjct: 188 DTNNPLVNIDYPIPGNDDAIRAIKLYVSAAADAVLEGRQSAQI 230
>gi|422608965|ref|ZP_16680924.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. mori str.
301020]
gi|330894592|gb|EGH27253.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. mori str.
301020]
Length = 247
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F++DV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|392420716|ref|YP_006457320.1| 30S ribosomal protein S2 [Pseudomonas stutzeri CCUG 29243]
gi|390982904|gb|AFM32897.1| 30S ribosomal protein S2 [Pseudomonas stutzeri CCUG 29243]
Length = 246
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 166/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEGQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F++DV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVVDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|423097066|ref|ZP_17084862.1| ribosomal protein S2 [Pseudomonas fluorescens Q2-87]
gi|397884843|gb|EJL01326.1| ribosomal protein S2 [Pseudomonas fluorescens Q2-87]
Length = 245
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|161723250|ref|YP_095741.2| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|397664163|ref|YP_006505701.1| 30S ribosomal protein S2 [Legionella pneumophila subsp.
pneumophila]
gi|61215426|sp|Q5ZUS8.2|RS2_LEGPH RecName: Full=30S ribosomal protein S2
gi|395127574|emb|CCD05772.1| 30S ribosomal subunit protein S2 [Legionella pneumophila subsp.
pneumophila]
Length = 254
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNPKMS YIFG RNKIHIINLEKTL M Y+ +L +K +
Sbjct: 8 ELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANKAKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 68 LFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 128 DMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKT 401
DTN+SPD I+YVIPGNDDS +++ +Y + + DA LD K TVG + S +
Sbjct: 188 DTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDS 237
>gi|378777576|ref|YP_005186014.1| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52629053|gb|AAU27794.1| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364508391|gb|AEW51915.1| 30S ribosomal protein S2 [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 271
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 170/239 (71%), Gaps = 4/239 (1%)
Query: 166 YMESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIY 225
YM +++ E +++AG HFGH+TRFWNPKMS YIFG RNKIHIINLEKTL M Y+
Sbjct: 17 YMNNVSMRE-LLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVS 75
Query: 226 QLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD 285
+L +K +LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+
Sbjct: 76 RLAANKAKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELK 135
Query: 286 LFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIK 345
G + KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +
Sbjct: 136 EMKEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARR 195
Query: 346 LNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKT 401
L IP+IGVVDTN+SPD I+YVIPGNDDS +++ +Y + + DA LD K TVG + S +
Sbjct: 196 LRIPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDS 254
>gi|77457328|ref|YP_346833.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1]
gi|398873972|ref|ZP_10629215.1| ribosomal protein S2 [Pseudomonas sp. GM74]
gi|123605789|sp|Q3KHB2.1|RS2_PSEPF RecName: Full=30S ribosomal protein S2
gi|77381331|gb|ABA72844.1| 30S ribosomal protein S2 [Pseudomonas fluorescens Pf0-1]
gi|398197672|gb|EJM84647.1| ribosomal protein S2 [Pseudomonas sp. GM74]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|398864641|ref|ZP_10620173.1| ribosomal protein S2 [Pseudomonas sp. GM78]
gi|398244759|gb|EJN30298.1| ribosomal protein S2 [Pseudomonas sp. GM78]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|398965082|ref|ZP_10680748.1| ribosomal protein S2 [Pseudomonas sp. GM30]
gi|398976831|ref|ZP_10686641.1| ribosomal protein S2 [Pseudomonas sp. GM25]
gi|398984038|ref|ZP_10690347.1| ribosomal protein S2 [Pseudomonas sp. GM24]
gi|399003068|ref|ZP_10705739.1| ribosomal protein S2 [Pseudomonas sp. GM18]
gi|399011337|ref|ZP_10713669.1| ribosomal protein S2 [Pseudomonas sp. GM16]
gi|424921657|ref|ZP_18345018.1| ribosomal protein S2 [Pseudomonas fluorescens R124]
gi|398118079|gb|EJM07819.1| ribosomal protein S2 [Pseudomonas sp. GM16]
gi|398123472|gb|EJM13021.1| ribosomal protein S2 [Pseudomonas sp. GM18]
gi|398138714|gb|EJM27728.1| ribosomal protein S2 [Pseudomonas sp. GM25]
gi|398147536|gb|EJM36240.1| ribosomal protein S2 [Pseudomonas sp. GM30]
gi|398156155|gb|EJM44579.1| ribosomal protein S2 [Pseudomonas sp. GM24]
gi|404302817|gb|EJZ56779.1| ribosomal protein S2 [Pseudomonas fluorescens R124]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|171463273|ref|YP_001797386.1| uridylate kinase [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171192811|gb|ACB43772.1| uridylate kinase [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 236
Score = 271 bits (692), Expect = 2e-69, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DA+ IN I +++ EI+++V+ G+ELAIVIGGGNI RG++ +DR+TAD
Sbjct: 13 GEALMGDDAFGINPVTIDSMVREIADVVNSGVELAIVIGGGNIFRGVAGGAAGMDRATAD 72
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D L + G+ + V SA+ +++ +E YI AI+ + EGKVVIFA G
Sbjct: 73 YMGMLATMMNSLALQDALRQKGVEARVQSALRMDQVVEPYIRPRAIRAMSEGKVVIFAAG 132
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ E++LKATKVDGIY++DP K +A +YK ITFDE + K L
Sbjct: 133 TGNPFFTTDTAAALRGAEMGVEVMLKATKVDGIYSADPVKDPTATLYKTITFDEALIKNL 192
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+T F+ CRD+KLPI+VFSI+K G L RV++G++EGTLV+
Sbjct: 193 QVMDATTFALCRDRKLPIKVFSILKPGTLMRVVQGESEGTLVH 235
>gi|388543704|ref|ZP_10146994.1| 30S ribosomal protein S2 [Pseudomonas sp. M47T1]
gi|388278261|gb|EIK97833.1| 30S ribosomal protein S2 [Pseudomonas sp. M47T1]
Length = 246
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|78485629|ref|YP_391554.1| 30S ribosomal protein S2 [Thiomicrospira crunogena XCL-2]
gi|78363915|gb|ABB41880.1| SSU ribosomal protein S2P [Thiomicrospira crunogena XCL-2]
Length = 248
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL M+ A+ ++ + KGT+
Sbjct: 12 QMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGIAAKKGTV 71
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A ++A EA R GMP+++ RWLGG+LTNFKTIK SI+ LK++++ +G+
Sbjct: 72 LFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLEVQEQDGTFE 131
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKEAL+ R++ KL +GGIK+M +PDAIFIID G K A+ EA L IP++GVV
Sbjct: 132 KITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKNLGIPVVGVV 191
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P+G++YVIPGNDD+ ++++LY DA + K
Sbjct: 192 DTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEGK 229
>gi|398877481|ref|ZP_10632626.1| ribosomal protein S2 [Pseudomonas sp. GM67]
gi|398883999|ref|ZP_10638945.1| ribosomal protein S2 [Pseudomonas sp. GM60]
gi|398195628|gb|EJM82662.1| ribosomal protein S2 [Pseudomonas sp. GM60]
gi|398202376|gb|EJM89222.1| ribosomal protein S2 [Pseudomonas sp. GM67]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|398843540|ref|ZP_10600679.1| ribosomal protein S2 [Pseudomonas sp. GM102]
gi|398858405|ref|ZP_10614095.1| ribosomal protein S2 [Pseudomonas sp. GM79]
gi|398907731|ref|ZP_10654026.1| ribosomal protein S2 [Pseudomonas sp. GM50]
gi|407366172|ref|ZP_11112704.1| 30S ribosomal protein S2 [Pseudomonas mandelii JR-1]
gi|398102078|gb|EJL92267.1| ribosomal protein S2 [Pseudomonas sp. GM102]
gi|398171047|gb|EJM58962.1| ribosomal protein S2 [Pseudomonas sp. GM50]
gi|398239131|gb|EJN24846.1| ribosomal protein S2 [Pseudomonas sp. GM79]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|312959392|ref|ZP_07773909.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6]
gi|311286109|gb|EFQ64673.1| 30S ribosomal protein S2 [Pseudomonas fluorescens WH6]
Length = 245
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|66044591|ref|YP_234432.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae B728a]
gi|289675257|ref|ZP_06496147.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae FF5]
gi|302187898|ref|ZP_07264571.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae 642]
gi|422616474|ref|ZP_16685180.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. japonica str.
M301072]
gi|422628311|ref|ZP_16693520.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. pisi str. 1704B]
gi|422638286|ref|ZP_16701717.1| 30S ribosomal protein S2 [Pseudomonas syringae Cit 7]
gi|422664982|ref|ZP_16724855.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|422671221|ref|ZP_16730587.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aceris str.
M302273]
gi|424066536|ref|ZP_17804000.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424071189|ref|ZP_17808615.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|440720413|ref|ZP_20900831.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP34876]
gi|440726541|ref|ZP_20906794.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP34881]
gi|440744202|ref|ZP_20923506.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP39023]
gi|443645004|ref|ZP_21128854.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae B64]
gi|81308450|sp|Q4ZWS8.1|RS2_PSEU2 RecName: Full=30S ribosomal protein S2
gi|63255298|gb|AAY36394.1| SSU ribosomal protein S2P [Pseudomonas syringae pv. syringae B728a]
gi|330896058|gb|EGH28279.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. japonica str.
M301072]
gi|330936826|gb|EGH40977.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. pisi str. 1704B]
gi|330950681|gb|EGH50941.1| 30S ribosomal protein S2 [Pseudomonas syringae Cit 7]
gi|330968961|gb|EGH69027.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aceris str.
M302273]
gi|330975401|gb|EGH75467.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|407999263|gb|EKG39649.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408002135|gb|EKG42398.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|440365938|gb|ELQ03025.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP34876]
gi|440366123|gb|ELQ03208.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP34881]
gi|440374216|gb|ELQ10952.1| 30S ribosomal protein S2 [Pseudomonas syringae BRIP39023]
gi|443285021|gb|ELS44026.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. syringae B64]
Length = 247
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|54297628|ref|YP_123997.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris]
gi|148359249|ref|YP_001250456.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby]
gi|296107294|ref|YP_003618994.1| 30S ribosomal protein S2 [Legionella pneumophila 2300/99 Alcoy]
gi|61215407|sp|Q5X4J7.1|RS2_LEGPA RecName: Full=30S ribosomal protein S2
gi|166225281|sp|A5ICL0.1|RS2_LEGPC RecName: Full=30S ribosomal protein S2
gi|53751413|emb|CAH12831.1| 30S ribosomal protein S2 [Legionella pneumophila str. Paris]
gi|148281022|gb|ABQ55110.1| 30S ribosomal protein S2 [Legionella pneumophila str. Corby]
gi|295649195|gb|ADG25042.1| small subunit ribosomal protein S2 [Legionella pneumophila 2300/99
Alcoy]
Length = 254
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNPKMS YIFG RNKIHIINLEKTL M Y+ +L +K +
Sbjct: 8 ELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLNDVTNYVSRLAANKAKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 68 LFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 128 DMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKT 401
DTN+SPD I+YVIPGNDDS +++ +Y + + DA LD K TVG + S +
Sbjct: 188 DTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDS 237
>gi|419955775|ref|ZP_14471898.1| 30S ribosomal protein S2 [Pseudomonas stutzeri TS44]
gi|387967475|gb|EIK51777.1| 30S ribosomal protein S2 [Pseudomonas stutzeri TS44]
Length = 246
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 165/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K ++
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ +++ LY + DA L +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGR 225
>gi|124266045|ref|YP_001020049.1| transcription modulator protein [Methylibium petroleiphilum PM1]
gi|124258820|gb|ABM93814.1| putative transcription modulator protein [Methylibium
petroleiphilum PM1]
Length = 204
Score = 271 bits (692), Expect = 2e-69, Method: Composition-based stats.
Identities = 127/179 (70%), Positives = 152/179 (84%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLF KP++I MNPY +VPILVERDLILYES+IINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLFAKPEDIALMNPYNEVPILVERDLILYESHIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERN-KTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
+ RAR RL L NFEKE+F H+ +LE K + K ++AR +IRDRL LAP+FLKNKY
Sbjct: 85 VARARVRLFLFNFEKELFAHVNLLEGRSGVKATDKQLEKARSQIRDRLTQLAPIFLKNKY 144
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
MLGD+FSMLDV IAPLLWRLDYY I+LSK+A PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 MLGDDFSMLDVAIAPLLWRLDYYAIDLSKNALPLLKYAERIFSRPAYIEALTPSEKVMR 203
>gi|398852000|ref|ZP_10608672.1| ribosomal protein S2 [Pseudomonas sp. GM80]
gi|398245288|gb|EJN30811.1| ribosomal protein S2 [Pseudomonas sp. GM80]
Length = 246
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|209574093|sp|Q31G43.2|RS2_THICR RecName: Full=30S ribosomal protein S2
Length = 244
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 166/218 (76%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL M+ A+ ++ + KGT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMGEYIFGARNKIHIVNLEKTLPMFNDALNFLGGIAAKKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A ++A EA R GMP+++ RWLGG+LTNFKTIK SI+ LK++++ +G+
Sbjct: 68 LFVGTKRAAGDLVAQEAKRCGMPYVNHRWLGGMLTNFKTIKQSIKNLKDLEVQEQDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K++KKEAL+ R++ KL +GGIK+M +PDAIFIID G K A+ EA L IP++GVV
Sbjct: 128 KITKKEALMRSRQKAKLELSLGGIKDMRAMPDAIFIIDTGNEKIAIQEAKNLGIPVVGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P+G++YVIPGNDD+ ++++LY DA + K
Sbjct: 188 DTNNDPNGVDYVIPGNDDAVRAVSLYLSAAADAINEGK 225
>gi|404398826|ref|ZP_10990410.1| 30S ribosomal protein S2 [Pseudomonas fuscovaginae UPB0736]
Length = 246
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|410089168|ref|ZP_11285794.1| 30S ribosomal protein S2 [Pseudomonas viridiflava UASWS0038]
gi|409763455|gb|EKN48415.1| 30S ribosomal protein S2 [Pseudomonas viridiflava UASWS0038]
Length = 247
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++ GVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKCGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|291614112|ref|YP_003524269.1| uridylate kinase [Sideroxydans lithotrophicus ES-1]
gi|291584224|gb|ADE11882.1| uridylate kinase [Sideroxydans lithotrophicus ES-1]
Length = 239
Score = 270 bits (691), Expect = 2e-69, Method: Composition-based stats.
Identities = 124/223 (55%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN +++ I++EI E+ G+E+A+V+GGGNI RG++ + +DR+ AD
Sbjct: 15 GEALMGDDSYGINRVVVERIVAEIKEVTELGVEVAMVVGGGNIFRGVAPAAEGMDRANAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NS+AL D + ++G+ V SA+S+E+ E +I A++YLE+GKVVIFA G
Sbjct: 75 YMGMLATVMNSMALQDAMTRAGLECRVQSALSLEQVAEPFIRGKALRYLEDGKVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
IG+PFFTTDT AALR E+ A++++KATKVDG+Y +DP K A Y+K++FDE I K L
Sbjct: 135 IGSPFFTTDTAAALRGVEMSADVVIKATKVDGVYTADPKKDPKATRYQKVSFDEAIGKDL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TA + CRDQKLPI VFSI K GALKRV+ G++EGTLV+
Sbjct: 195 KVMDATALTLCRDQKLPIIVFSIFKEGALKRVVMGQDEGTLVH 237
>gi|330807781|ref|YP_004352243.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378949069|ref|YP_005206557.1| protein RpsB [Pseudomonas fluorescens F113]
gi|423695567|ref|ZP_17670057.1| ribosomal protein S2 [Pseudomonas fluorescens Q8r1-96]
gi|327375889|gb|AEA67239.1| 30S ribosomal protein S2 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359759083|gb|AEV61162.1| RpsB [Pseudomonas fluorescens F113]
gi|388009051|gb|EIK70302.1| ribosomal protein S2 [Pseudomonas fluorescens Q8r1-96]
Length = 245
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRASIKRLRDLEVQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|395762170|ref|ZP_10442839.1| uridylate kinase [Janthinobacterium lividum PAMC 25724]
Length = 205
Score = 270 bits (690), Expect = 3e-69, Method: Composition-based stats.
Identities = 125/204 (61%), Positives = 164/204 (80%)
Query: 619 IISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILN 678
++++++E+ G+ELAIVIGGGNI RG++ Q +DR+TADYMGMLAT++N+LAL D +
Sbjct: 1 MVADVAEVAKLGVELAIVIGGGNIFRGVAPGAQGMDRATADYMGMLATVMNALALADAMR 60
Query: 679 KSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEI 738
GI + VMSAI IE+ +E Y+ A++YLEEGKVV+FA G GNPFFTTDT AALR +EI
Sbjct: 61 HVGITARVMSAIGIEQVVEPYVRPKALQYLEEGKVVVFAAGTGNPFFTTDTAAALRGSEI 120
Query: 739 KAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIR 798
AEI+LKATKVDG+Y +DP K +A ++ ITFD+ ISK L++MD+TAF+ CRDQKLPI+
Sbjct: 121 SAEIVLKATKVDGVYTADPKKDPNATLFHTITFDDAISKHLQVMDATAFALCRDQKLPIK 180
Query: 799 VFSIIKSGALKRVIEGKNEGTLVY 822
VFSI K GAL RVI G++EGTLV+
Sbjct: 181 VFSITKPGALMRVIMGEDEGTLVH 204
>gi|429330791|ref|ZP_19211573.1| 30S ribosomal protein S2 [Pseudomonas putida CSV86]
gi|428764571|gb|EKX86704.1| 30S ribosomal protein S2 [Pseudomonas putida CSV86]
Length = 243
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVEHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|146308074|ref|YP_001188539.1| 30S ribosomal protein S2 [Pseudomonas mendocina ymp]
gi|421503971|ref|ZP_15950915.1| 30S ribosomal protein S2 [Pseudomonas mendocina DLHK]
gi|166226741|sp|A4XWU1.1|RS2_PSEMY RecName: Full=30S ribosomal protein S2
gi|145576275|gb|ABP85807.1| SSU ribosomal protein S2P [Pseudomonas mendocina ymp]
gi|400345072|gb|EJO93438.1| 30S ribosomal protein S2 [Pseudomonas mendocina DLHK]
Length = 247
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 166/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G PF+D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRS 226
>gi|431927943|ref|YP_007240977.1| 30S ribosomal protein S2 [Pseudomonas stutzeri RCH2]
gi|431826230|gb|AGA87347.1| ribosomal protein S2 [Pseudomonas stutzeri RCH2]
Length = 246
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 166/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+R++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMDKYIFGARNKIHIINLEKTLPMFNDALRFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R P++D RWLGG+LTN+KTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCNSPYVDHRWLGGMLTNYKTIRASIKRLRELEVQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F++DV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVVDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|325983648|ref|YP_004296050.1| uridylate kinase [Nitrosomonas sp. AL212]
gi|325533167|gb|ADZ27888.1| uridylate kinase [Nitrosomonas sp. AL212]
Length = 238
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 168/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN +++ I++EI E+ GIE+AIV+GGGNI RG+ + ++R TAD
Sbjct: 15 GEALMGDDKYGINHAVMGRIVAEIEEVSKLGIEIAIVVGGGNIFRGMKSANDGLERVTAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + G++ + SA+ IE+ +E YI AI+YL++GK+VIFA G
Sbjct: 75 YMGMLATVMNALALQDAMKLVGLVPRIQSALRIEQVVEPYIRGRAIRYLKDGKIVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +I+LKATKVDGIY SDP L A + K+TFDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNVDIMLKATKVDGIYTSDPKIDLEATRFHKLTFDEAIAKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLP+ VFSI K+GALKR+I G++EGTLV
Sbjct: 195 QVMDATALTLCRDQKLPLSVFSIFKAGALKRIITGEDEGTLV 236
>gi|399519987|ref|ZP_10760778.1| 30S ribosomal protein S2 [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112384|emb|CCH37337.1| 30S ribosomal protein S2 [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 246
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/218 (55%), Positives = 166/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G PF+D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEATRCGSPFVDHRWLGGMLTNYKTIRASIKRLRELEAQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRS 226
>gi|448748401|ref|ZP_21730035.1| Ribosomal protein S2, bacteria/mitochondria/plastid [Halomonas
titanicae BH1]
gi|445564022|gb|ELY20154.1| Ribosomal protein S2, bacteria/mitochondria/plastid [Halomonas
titanicae BH1]
Length = 249
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 164/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQT++WNPKMS +IFG RNKIHIINLE TL +AI + ++ S +L
Sbjct: 9 LLKAGAHFGHQTKYWNPKMSKFIFGARNKIHIINLEHTLPALNEAIDVVEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI EA RAG PF++ RWLGG+LTNFKTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSASKVIKEEANRAGQPFVNHRWLGGMLTNFKTIRQSIKRLRDLETMREDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYVKAIADACGRAK 225
>gi|269469077|gb|EEZ80632.1| ribosomal protein S2 [uncultured SUP05 cluster bacterium]
Length = 321
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 176/242 (72%), Gaps = 1/242 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T +K+++AGVHFGH++RFW+PKM YI+G RN +HIINLEKTL M+ + + +
Sbjct: 4 TSMKKMLEAGVHFGHRSRFWHPKMDRYIYGTRNGVHIINLEKTLPMFNDMLNFASKTAAQ 63
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
++LFVGTKR A V+ EA+R GMP+++ RWLGG++TN+KTIK SI+RLK+++ F+
Sbjct: 64 GKSILFVGTKRAASDVMKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLE-FLAE 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
+ + KKEAL+ R+ KL R +GGIK++ IPD +FIID+G+ K A+ EA KL++PI
Sbjct: 123 ENFTQFGKKEALMMTREMEKLERSLGGIKDLGGIPDVVFIIDIGHEKNAIREAQKLHLPI 182
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKK 410
IG+VDTNH+P+GI+YV+PGNDDS ++I+ Y + + +A L+AK ++ T A + KK
Sbjct: 183 IGIVDTNHNPEGIDYVVPGNDDSIRAISYYAREVANAVLEAKAAAGTQTSTAAKKVTAKK 242
Query: 411 AL 412
+
Sbjct: 243 PV 244
>gi|443469605|ref|ZP_21059759.1| SSU ribosomal protein S2p (SAe) [Pseudomonas pseudoalcaligenes
KF707]
gi|442899057|gb|ELS25588.1| SSU ribosomal protein S2p (SAe) [Pseudomonas pseudoalcaligenes
KF707]
Length = 246
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 165/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALSFVEKLAAGKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGAPYVDHRWLGGMLTNYKTIRQSIKRLRELETQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAISEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + DA + +
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLSSVADAVIRGR 225
>gi|397687900|ref|YP_006525219.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 10701]
gi|395809456|gb|AFN78861.1| 30S ribosomal protein S2 [Pseudomonas stutzeri DSM 10701]
Length = 246
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 167/220 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL M+ A++++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMNKYIFGARNKIHIINLEKTLPMFNDALQFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G P++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRELETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F++DV + + A+SEA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVVDVDHERIAISEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN SP+G++Y+IPGNDD+ +++ LY + DA L + G
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSMADAVLRGRQNG 228
>gi|253996535|ref|YP_003048599.1| uridylate kinase [Methylotenera mobilis JLW8]
gi|253983214|gb|ACT48072.1| uridylate kinase [Methylotenera mobilis JLW8]
Length = 238
Score = 270 bits (689), Expect = 4e-69, Method: Composition-based stats.
Identities = 131/222 (59%), Positives = 169/222 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I I+SE+ E+V G+++A+VIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATITRIVSEVKEVVDLGVQVAVVIGGGNIFRGVAPAAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + G+ + V SA+SIE+ E YI AI+YLEEG+VVIF G
Sbjct: 75 YMGMLATVMNAMALQDAMKNIGLNARVQSALSIEQVAEPYIRGKAIRYLEEGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR EI AEI++KATKVDG+Y DP A+ YK I+FDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGMEINAEIVIKATKVDGVYTDDPKTNPEAMRYKTISFDEAITKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI K GALK+VI G++EGT+V
Sbjct: 195 KVMDATALTLCRDQKLPISVFSIFKQGALKKVIMGEDEGTMV 236
>gi|70728558|ref|YP_258307.1| 30S ribosomal protein S2 [Pseudomonas protegens Pf-5]
gi|123748533|sp|Q4KHH6.1|RS2_PSEF5 RecName: Full=30S ribosomal protein S2
gi|68342857|gb|AAY90463.1| ribosomal protein S2 [Pseudomonas protegens Pf-5]
Length = 245
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTN+KTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLEVQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|359780509|ref|ZP_09283735.1| 30S ribosomal protein S2 [Pseudomonas psychrotolerans L19]
gi|359371821|gb|EHK72386.1| 30S ribosomal protein S2 [Pseudomonas psychrotolerans L19]
Length = 245
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 165/214 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G PF+D RWLGG+LTN+KTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGQPFVDHRWLGGMLTNYKTIRASIKRLRDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F++DV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFL 389
TN SP+G++YVIPGNDD+ +++ LY + DA +
Sbjct: 189 TNSSPEGVDYVIPGNDDAFRAVQLYLSSVADAVI 222
>gi|333901615|ref|YP_004475488.1| 30S ribosomal protein S2 [Pseudomonas fulva 12-X]
gi|333116880|gb|AEF23394.1| ribosomal protein S2 [Pseudomonas fulva 12-X]
Length = 247
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 167/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G PF+D RWLGG+LTN+KTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRDLEVQSQDGTFSK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRS 226
>gi|389683428|ref|ZP_10174760.1| ribosomal protein S2 [Pseudomonas chlororaphis O6]
gi|399006247|ref|ZP_10708775.1| ribosomal protein S2 [Pseudomonas sp. GM17]
gi|425897801|ref|ZP_18874392.1| ribosomal protein S2 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388552941|gb|EIM16202.1| ribosomal protein S2 [Pseudomonas chlororaphis O6]
gi|397892461|gb|EJL08939.1| ribosomal protein S2 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398122706|gb|EJM12292.1| ribosomal protein S2 [Pseudomonas sp. GM17]
Length = 246
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 168/217 (77%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTN+KTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLEVQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|464713|sp|P34831.1|RS2_SPIPL RecName: Full=30S ribosomal protein S2
gi|296030|emb|CAA37700.1| ribosomal protein S2 [Arthrospira platensis]
gi|227458|prf||1704175A ribosomal protein S2
Length = 251
Score = 269 bits (688), Expect = 6e-69, Method: Composition-based stats.
Identities = 123/226 (54%), Positives = 168/226 (74%), Gaps = 1/226 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T +++AGVHFGHQTRFWNPKM YIFG RNKIHI+NLEKTL ++ A+ ++ +
Sbjct: 1 MPSVT-MRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIVNLEKTLPLFNDALGFVNK 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L S T+LFVGTKR A+ +A EA R GMP++D RWLGG+LTN+KTI+ SI+R ++++
Sbjct: 60 LASSNNTILFVGTKRAAQKAVAEEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRFRDLEA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+ KL+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + AV EA KL
Sbjct: 120 QANDGTFDKLTKKEALMRRREMEKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IP+I VVDTN +PDG++Y IPGNDD+ ++I LY + DA ++ +
Sbjct: 180 GIPVIAVVDTNSNPDGVDYFIPGNDDAIRAIQLYVGAVADAIIEGR 225
>gi|330504244|ref|YP_004381113.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01]
gi|328918530|gb|AEB59361.1| 30S ribosomal protein S2 [Pseudomonas mendocina NK-01]
Length = 246
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 166/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G PF+D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGSPFVDHRWLGGMLTNYKTIRASIKRLRELETQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVIRGRS 226
>gi|253999118|ref|YP_003051181.1| uridylate kinase [Methylovorus glucosetrophus SIP3-4]
gi|313201219|ref|YP_004039877.1| uridylate kinase [Methylovorus sp. MP688]
gi|253985797|gb|ACT50654.1| uridylate kinase [Methylovorus glucosetrophus SIP3-4]
gi|312440535|gb|ADQ84641.1| uridylate kinase [Methylovorus sp. MP688]
Length = 238
Score = 269 bits (688), Expect = 6e-69, Method: Composition-based stats.
Identities = 130/222 (58%), Positives = 168/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN + I I++EI E+V G+++A+VIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGDDSYGINRATISRIVNEIKEVVDMGVQVAVVIGGGNIFRGVAPAAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D + G++S V SA++IE+ E YI AI+YLEEG+VVIF G
Sbjct: 75 YMGMMATVMNALALQDAMRHIGLVSRVQSALNIEQVAEPYIRGKAIRYLEEGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ AEI+LKATKVDG+Y DP A+ YK +TFDE I K L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNAEIVLKATKVDGVYTDDPKTNPDAMRYKTLTFDEAIIKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI K GALKRV+ G++EGT V
Sbjct: 195 KVMDATALTLCRDQKLPISVFSIFKQGALKRVVMGEDEGTRV 236
>gi|389792809|ref|ZP_10195991.1| 30S ribosomal protein S2 [Rhodanobacter fulvus Jip2]
gi|388435673|gb|EIL92570.1| 30S ribosomal protein S2 [Rhodanobacter fulvus Jip2]
Length = 282
Score = 269 bits (688), Expect = 6e-69, Method: Composition-based stats.
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ L +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTSRWLGGMLTNFRTVKQSVSRLKELEAAETDGSFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDA+F+ID+G+ AV EA KL IP+I VV
Sbjct: 128 KLVKHEVLARRREREKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++PD ++Y IPGNDD+ ++I LY + D+ L+ K
Sbjct: 188 DTNYNPDLVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|397667441|ref|YP_006508978.1| 30S ribosomal protein S2 [Legionella pneumophila subsp.
pneumophila]
gi|395130852|emb|CCD09101.1| 30S ribosomal subunit protein S2 [Legionella pneumophila subsp.
pneumophila]
Length = 254
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/230 (54%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNPKM YIFG RNKIHIINLEKTL M Y+ +L +K +
Sbjct: 8 ELLEAGAHFGHRTRFWNPKMGEYIFGSRNKIHIINLEKTLPMLNDVTNYVSRLAANKAKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 68 LFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 128 DMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKT 401
DTN+SPD I+YVIPGNDDS +++ +Y + + DA LD K TVG + S +
Sbjct: 188 DTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDS 237
>gi|409426402|ref|ZP_11260957.1| 30S ribosomal protein S2 [Pseudomonas sp. HYS]
Length = 244
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|171057621|ref|YP_001789970.1| glutathione S-transferase domain-containing protein [Leptothrix
cholodnii SP-6]
gi|170775066|gb|ACB33205.1| Glutathione S-transferase domain [Leptothrix cholodnii SP-6]
Length = 204
Score = 268 bits (686), Expect = 8e-69, Method: Composition-based stats.
Identities = 124/179 (69%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DL+ KP++I MNPY +VPILVER+LILYES+IINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDVDLYAKPEDIALMNPYNEVPILVERELILYESHIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERN-KTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
+ RAR RL L NFEKE+F H+ +LE K + K ++AR +IRDRL LAP+F KN+Y
Sbjct: 85 VARARVRLFLFNFEKELFTHVNLLEGRGGVKGNDKQLEKARSQIRDRLTQLAPIFQKNRY 144
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
MLGD+FSMLDV IAPLLWRLDYYGI+LSK+A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 145 MLGDDFSMLDVAIAPLLWRLDYYGIDLSKNAAPLLKYAERIFSRPAYIEALTPSEKVMR 203
>gi|118603032|ref|YP_904247.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166226750|sp|A1AXW9.1|RS2_RUTMC RecName: Full=30S ribosomal protein S2
gi|118567971|gb|ABL02776.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 312
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 177/242 (73%), Gaps = 3/242 (1%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T +K+++AGVHFGH++RFW+PKM +I+G RN +HIINLEKTL ++ A+ + ++
Sbjct: 4 TSMKKMLEAGVHFGHRSRFWSPKMGRFIYGTRNGVHIINLEKTLPLFNDALNFASKITAV 63
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
++LFVGTKR A +I EA+R GMP+++ RWLGG++TN+KTIK SI+RLK+++ F+
Sbjct: 64 GRSILFVGTKRAASNIIKQEAMRCGMPYVNHRWLGGMMTNYKTIKVSIKRLKDLE-FLAE 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
+ + KKEAL+ R+ KL R +GGIK++N IPD IF+ID+G K AV+EA KL++PI
Sbjct: 123 ENFNQFGKKEALMMTREMEKLERSLGGIKDLNDIPDVIFVIDIGVEKNAVAEAKKLHLPI 182
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK--TVGELRSKTLAPIMEC 408
IG+VDTNHSP+GI+YVIPGNDDS ++I Y + I +A L+AK T + K +E
Sbjct: 183 IGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREIANAILEAKAATSTSIEKKVSVKKLET 242
Query: 409 KK 410
KK
Sbjct: 243 KK 244
>gi|407802897|ref|ZP_11149736.1| 30S ribosomal protein S2 [Alcanivorax sp. W11-5]
gi|407023057|gb|EKE34805.1| 30S ribosomal protein S2 [Alcanivorax sp. W11-5]
Length = 249
Score = 268 bits (686), Expect = 9e-69, Method: Composition-based stats.
Identities = 121/217 (55%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM +IFG RNKIHI+NLEKTL ++ A+ ++ +L S +L
Sbjct: 9 MLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIVNLEKTLPLFTDALTFVNRLASSNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ VIA EA R GMP++D RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAQKVIAEEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRDLEAQAADGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + AV EA KL IP+I VVD
Sbjct: 129 LTKKEALMRRREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKLGIPVIAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ ++I LY + + DA L+ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYVQAVADAILEGR 225
>gi|406943710|gb|EKD75645.1| hypothetical protein ACD_44C00069G0004 [uncultured bacterium]
Length = 260
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 187/261 (71%), Gaps = 9/261 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNP+M+ Y++G RNKIHIINLEKTL + A+ ++ L K +L
Sbjct: 8 MLEAGVHFGHQTRYWNPEMAPYLYGARNKIHIINLEKTLPYFRDALNFVGNLASKKAKIL 67
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ I +A+R MP+I+ RWLGGLLTN+KT++ SI+RL+E++ T+G++ K
Sbjct: 68 FVGTKRAAQVAIKEQAIRCHMPYINHRWLGGLLTNYKTVRQSIKRLREVESMETDGTLEK 127
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R++ KL R +GGIK+M +PDA+F+IDVG+ AV EA K+ IP+IGVVD
Sbjct: 128 ITKKERLMIAREKQKLERSLGGIKSMGGLPDALFVIDVGHENIAVKEAKKMKIPVIGVVD 187
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
+N+SP I+YVIPGNDD+ +++ Y I DA L+ + + S++ AP++E ++ +IEA
Sbjct: 188 SNNSPREIDYVIPGNDDALRAVQFYATAIADAILEGRASAGIISES-APVVE-EEIIIEA 245
Query: 416 NGKLSKAEEILRIKLGKKILN 436
S I LG ++N
Sbjct: 246 KASGS-------IDLGDDVVN 259
>gi|152986930|ref|YP_001346867.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PA7]
gi|452878642|ref|ZP_21955836.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa VRFPA01]
gi|166226359|sp|A6V1D2.1|RS2_PSEA7 RecName: Full=30S ribosomal protein S2
gi|150962088|gb|ABR84113.1| ribosomal protein S2 [Pseudomonas aeruginosa PA7]
gi|452184715|gb|EME11733.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa VRFPA01]
Length = 246
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + +A + K
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGK 225
>gi|429212271|ref|ZP_19203436.1| 30S ribosomal protein S2 [Pseudomonas sp. M1]
gi|428156753|gb|EKX03301.1| 30S ribosomal protein S2 [Pseudomonas sp. M1]
Length = 246
Score = 268 bits (686), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL ++ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPLFNEALTFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRELETQQQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SPDG++YVIPGNDD+ +++ LY + +A L +
Sbjct: 189 TNSSPDGVDYVIPGNDDAIRAVQLYLGSMAEAVLRGR 225
>gi|307546394|ref|YP_003898873.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581]
gi|307218418|emb|CBV43688.1| 30S ribosomal protein S2 [Halomonas elongata DSM 2581]
Length = 248
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 161/217 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS YIFG RNKIHIINLE TL +AI + ++ + +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNEAIDVVEKMAAANNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R G F++ RWLGG+LTNFKTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSASKIVKEEANRVGQSFVNHRWLGGMLTNFKTIRQSIKRLRELETMHEDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSDPDGVDYVIPGNDDSIRAIQIYVKAIADACARAK 225
>gi|254281535|ref|ZP_04956503.1| ribosomal protein S2 [gamma proteobacterium NOR51-B]
gi|219677738|gb|EED34087.1| ribosomal protein S2 [gamma proteobacterium NOR51-B]
Length = 282
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/232 (53%), Positives = 173/232 (74%), Gaps = 4/232 (1%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ + A+ ++ +L +K +L
Sbjct: 30 LLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALNHVKKLAGNKNQIL 89
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I A R GMP++ RWLGG+LTN+KTI++SI+R ++++ +G++ K
Sbjct: 90 FVGTKRAAGKIIEENATRCGMPYVSHRWLGGMLTNYKTIRSSIKRYRDLEEQEKDGTLEK 149
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R + KL R IGGIK+M +PDA+F+IDV + + A++EA KL IP+IG+VD
Sbjct: 150 LTKKEALMRTRTKDKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGIVD 209
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PDG++YVIPGNDD+ ++I LY K + DA ++ K GE S AP+++
Sbjct: 210 TNSNPDGVDYVIPGNDDAIRAIKLYVKAVADAVIEGK--GE--SGEAAPVVD 257
>gi|386818052|ref|ZP_10105270.1| SSU ribosomal protein S2P [Thiothrix nivea DSM 5205]
gi|386422628|gb|EIJ36463.1| SSU ribosomal protein S2P [Thiothrix nivea DSM 5205]
Length = 257
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 159/213 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM +IFG RNKIHIINLE+TL M+ A +I +L G +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMGQFIFGERNKIHIINLEQTLPMFNDATNFIGKLAAKGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR + A+ MP+++ RWLGG+LTNFKT+K SI+RLK+++ +GS +
Sbjct: 68 LFVGTKRSAREAVQEAAIACKMPYVNHRWLGGMLTNFKTVKQSIRRLKDLEKMAEDGSFQ 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKE L+ R+ KL R +GGIK+M +PDAIFIIDVGY K AV EA KL IP+IGVV
Sbjct: 128 KLGKKEVLMLTRESEKLERSLGGIKDMRGLPDAIFIIDVGYEKIAVQEANKLGIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
DTN+S GI+YVIPGNDD+ ++I LY DA
Sbjct: 188 DTNNSLAGIDYVIPGNDDAIRAIQLYVSAASDA 220
>gi|224825015|ref|ZP_03698121.1| uridylate kinase [Pseudogulbenkiania ferrooxidans 2002]
gi|347540371|ref|YP_004847796.1| uridylate kinase [Pseudogulbenkiania sp. NH8B]
gi|224602686|gb|EEG08863.1| uridylate kinase [Pseudogulbenkiania ferrooxidans 2002]
gi|345643549|dbj|BAK77382.1| uridylate kinase [Pseudogulbenkiania sp. NH8B]
Length = 239
Score = 268 bits (685), Expect = 1e-68, Method: Composition-based stats.
Identities = 127/223 (56%), Positives = 171/223 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN + I+ I+ +I E+V GIE+ IVIGGGNI RG++ +DR+TAD
Sbjct: 16 GEALMGDDSYGINRATIEQIVGQIKEVVDLGIEVGIVIGGGNIFRGVAPAASGMDRATAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D + K G+++ V SA+++++ E Y+ A++YLEEGKVVIFA G
Sbjct: 76 YMGMMATVMNALALKDAMTKVGLVARVQSALTMQQIAEPYVRGKAMQYLEEGKVVIFAAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +I+LKATKVDG+Y DP K A Y+ +TFDE IS+ L
Sbjct: 136 TGNPFFTTDTAAALRGMEMNVDIMLKATKVDGVYTDDPKKNPDAQRYQTLTFDEAISRNL 195
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQ L I+VFSI K+GALKRV+ G++EGTLV+
Sbjct: 196 KVMDATAFALCRDQNLNIKVFSIFKAGALKRVVLGEDEGTLVH 238
>gi|167032159|ref|YP_001667390.1| 30S ribosomal protein S2 [Pseudomonas putida GB-1]
gi|189045003|sp|B0KS99.1|RS2_PSEPG RecName: Full=30S ribosomal protein S2
gi|166858647|gb|ABY97054.1| ribosomal protein S2 [Pseudomonas putida GB-1]
Length = 245
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 167/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K ++
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERLAQGKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A +A RAG P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEQAARAGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIELYMTSMADAIIRGR 225
>gi|92112696|ref|YP_572624.1| 30S ribosomal protein S2P [Chromohalobacter salexigens DSM 3043]
gi|123265800|sp|Q1R033.1|RS2_CHRSD RecName: Full=30S ribosomal protein S2
gi|91795786|gb|ABE57925.1| SSU ribosomal protein S2P [Chromohalobacter salexigens DSM 3043]
Length = 246
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS YIFG RNKIHIINLE TL A+ I ++ S +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEHTLPALNDALAVIEKMVASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA RAG PF++ RWLGG+LTNFKTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRAASKIVKEEARRAGQPFVNHRWLGGMLTNFKTIRVSIKRLRELEAMHEDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R +GGIK+M +PDA+F++DV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSVGGIKDMGGLPDALFVVDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y + + D + AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYAQAVADVCVRAK 225
>gi|88798258|ref|ZP_01113844.1| ribosomal protein S2 [Reinekea blandensis MED297]
gi|88779034|gb|EAR10223.1| ribosomal protein S2 [Reinekea sp. MED297]
Length = 241
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 164/219 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKMS YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 4 LLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPALNDALSFVGSLAAKKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA RAGMP++ RWLGG+LTN+KTI+ SI+RL+E+ +G+ +
Sbjct: 64 FVGTKRSASNIIREEATRAGMPYVAHRWLGGMLTNYKTIRQSIKRLRELQTQQDDGTFEQ 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL + IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 124 LTKKERLMNTREIAKLEKSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLGIPVIGVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN +PDGI+YVIPGNDD+ ++I +Y + + DA L+AKT
Sbjct: 184 TNSNPDGIDYVIPGNDDAIRAIEIYAQAMADAVLEAKTA 222
>gi|15598852|ref|NP_252346.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1]
gi|116051653|ref|YP_789508.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890119|ref|YP_002438983.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58]
gi|296387837|ref|ZP_06877312.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAb1]
gi|313109061|ref|ZP_07795033.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016]
gi|355640000|ref|ZP_09051490.1| 30S ribosomal protein S2 [Pseudomonas sp. 2_1_26]
gi|386057357|ref|YP_005973879.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa M18]
gi|386067691|ref|YP_005982995.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982620|ref|YP_006481207.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa DK2]
gi|416854829|ref|ZP_11911159.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 138244]
gi|416873841|ref|ZP_11917744.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 152504]
gi|418586109|ref|ZP_13150155.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589463|ref|ZP_13153385.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa MPAO1/P2]
gi|419754752|ref|ZP_14281110.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PADK2_CF510]
gi|420138145|ref|ZP_14646086.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa CIG1]
gi|421152535|ref|ZP_15612115.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 14886]
gi|421158551|ref|ZP_15617799.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 25324]
gi|421166112|ref|ZP_15624380.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 700888]
gi|421173106|ref|ZP_15630860.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa CI27]
gi|421179180|ref|ZP_15636776.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa E2]
gi|421518199|ref|ZP_15964873.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO579]
gi|424939530|ref|ZP_18355293.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa NCMG1179]
gi|451987764|ref|ZP_21935916.1| SSU ribosomal protein S2p (SAe) [Pseudomonas aeruginosa 18A]
gi|12230937|sp|O82850.2|RS2_PSEAE RecName: Full=30S ribosomal protein S2
gi|122260796|sp|Q02RC8.1|RS2_PSEAB RecName: Full=30S ribosomal protein S2
gi|226697646|sp|B7V7F7.1|RS2_PSEA8 RecName: Full=30S ribosomal protein S2
gi|9949817|gb|AAG07044.1|AE004785_8 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO1]
gi|115586874|gb|ABJ12889.1| 30S ribosomal subunit protein S2 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218770342|emb|CAW26107.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa LESB58]
gi|310881535|gb|EFQ40129.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 39016]
gi|334843578|gb|EGM22165.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 138244]
gi|334844255|gb|EGM22832.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 152504]
gi|346055976|dbj|GAA15859.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa NCMG1179]
gi|347303663|gb|AEO73777.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa M18]
gi|348036250|dbj|BAK91610.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa NCGM2.S1]
gi|354831520|gb|EHF15532.1| 30S ribosomal protein S2 [Pseudomonas sp. 2_1_26]
gi|375043783|gb|EHS36399.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051697|gb|EHS44163.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa MPAO1/P2]
gi|384398570|gb|EIE44975.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PADK2_CF510]
gi|392318125|gb|AFM63505.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa DK2]
gi|403249128|gb|EJY62643.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa CIG1]
gi|404347681|gb|EJZ74030.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PAO579]
gi|404525295|gb|EKA35571.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 14886]
gi|404536407|gb|EKA46047.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa CI27]
gi|404539089|gb|EKA48594.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 700888]
gi|404547423|gb|EKA56421.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa E2]
gi|404549492|gb|EKA58350.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa ATCC 25324]
gi|451754523|emb|CCQ88439.1| SSU ribosomal protein S2p (SAe) [Pseudomonas aeruginosa 18A]
gi|453047337|gb|EME95051.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa PA21_ST175]
Length = 246
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + +A + K
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGK 225
>gi|407695751|ref|YP_006820539.1| 30S ribosomal protein S2 [Alcanivorax dieselolei B5]
gi|407253089|gb|AFT70196.1| 30S ribosomal protein S2 [Alcanivorax dieselolei B5]
Length = 253
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 167/226 (73%), Gaps = 1/226 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T +++AGVHFGHQTR+WNPKM +IFG RNKIHI+NLE TL ++ +AI ++ +
Sbjct: 1 MSSVT-MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKIHIVNLESTLPLFNEAIGFLNK 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L S +LFVGTKR A+ I EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++
Sbjct: 60 LAASNNKVLFVGTKRAAQKAIREEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRLRDLEA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G++ KL+KKEAL+ +R+ KL R IGGIK M +PDA+F+IDV + AV EA KL
Sbjct: 120 QSEDGTLAKLTKKEALMRHREMEKLERSIGGIKEMGGLPDALFVIDVDHEDIAVQEARKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IP++ VVDTN PD I+YVIPGNDD+ ++I LY + DA L+ K
Sbjct: 180 GIPVVAVVDTNSDPDDIDYVIPGNDDAIRAIQLYVQAAADAILEGK 225
>gi|226945941|ref|YP_002801014.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ]
gi|259494989|sp|C1DSU6.1|RS2_AZOVD RecName: Full=30S ribosomal protein S2
gi|226720868|gb|ACO80039.1| 30S ribosomal protein S2 [Azotobacter vinelandii DJ]
Length = 246
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 164/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGCHFGHQTRYWNPKMGRYIFGARNKIHIINLEKTLPMFNEALSFVEKLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R MP++D RWLGG+LTN+KTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSAGRLVREEAARCSMPYVDHRWLGGMLTNYKTIRASIKRLRELETQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A+SEA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLERSLGGIKDMGGLPDAMFVIDVDHERIAISEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ +++ LY + DA L +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAVQLYLGSVADAVLRGR 225
>gi|49082262|gb|AAT50531.1| PA3656, partial [synthetic construct]
Length = 247
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + +A + K
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGK 225
>gi|389736331|ref|ZP_10189892.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|389737062|ref|ZP_10190551.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|388437781|gb|EIL94553.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|388439498|gb|EIL96049.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
Length = 279
Score = 267 bits (683), Expect = 2e-68, Method: Composition-based stats.
Identities = 122/218 (55%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ L +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTARWLGGMLTNFRTVKQSVARLKELEAAETDGSFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIKNMN +PDA+F+ID+G+ AV EA KL IP+I VV
Sbjct: 128 KLVKHEVLARRRERDKLENSLGGIKNMNRLPDALFVIDIGHEDIAVQEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ ++I LY + D+ L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|350544619|ref|ZP_08914204.1| Uridylate kinase [Candidatus Burkholderia kirkii UZHbot1]
gi|350527587|emb|CCD37763.1| Uridylate kinase [Candidatus Burkholderia kirkii UZHbot1]
Length = 220
Score = 267 bits (683), Expect = 2e-68, Method: Composition-based stats.
Identities = 125/219 (57%), Positives = 169/219 (77%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ IN + I+ ++++I+E+V G +LA+VIGGGNI RG++ +DR+TADYMGM
Sbjct: 1 MGDDAFGINRATIERMVADIAEVVRIGTQLAVVIGGGNIFRGVAGGAAGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
LAT++N+LAL D + + I + V SA+ +++ +E YI AI+ LEEGKVVIFA G GNP
Sbjct: 61 LATMMNALALQDAMRHACIDARVQSALRMDQVVEPYIRPRAIRQLEEGKVVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALR +EI A ++LKATKVDG+Y++DP K A Y I+FDE IS+ L++MD
Sbjct: 121 FFTTDTAAALRGSEIGAAVVLKATKVDGVYSADPKKEPDATRYSTISFDEAISRNLQVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TAF+ CRDQKLPIRVFSI K GALKR+++G +EGTLV+
Sbjct: 181 ATAFALCRDQKLPIRVFSITKPGALKRIVQGDDEGTLVH 219
>gi|388258215|ref|ZP_10135393.1| ribosomal protein S2 [Cellvibrio sp. BR]
gi|387938336|gb|EIK44889.1| ribosomal protein S2 [Cellvibrio sp. BR]
Length = 240
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 160/216 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ I Q+ K +L
Sbjct: 4 MLSAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALALIQQMASQKKKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ I EA+RAG PF+ RWLGG+LTN+KTI+ SI+RL+E+ +G+ K
Sbjct: 64 FVGTKRAAQKTIKEEAIRAGQPFVSHRWLGGMLTNYKTIRASIRRLQELTTQSEDGTFAK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R IGGIKN+ +PDA+F+IDV + + A+ EA KL IP+IG+VD
Sbjct: 124 LTKKEALMRTRDMEKLERSIGGIKNIAGLPDAMFVIDVDHERIAIQEANKLGIPVIGIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN +P+G++YVIPGNDD+ ++I LY I DA LD
Sbjct: 184 TNSNPEGVDYVIPGNDDAIRAIKLYVSAIADACLDG 219
>gi|26988323|ref|NP_743748.1| 30S ribosomal protein S2 [Pseudomonas putida KT2440]
gi|148549392|ref|YP_001269494.1| 30S ribosomal protein S2 [Pseudomonas putida F1]
gi|339486113|ref|YP_004700641.1| 30S ribosomal protein S2 [Pseudomonas putida S16]
gi|386013535|ref|YP_005931812.1| protein RpsB [Pseudomonas putida BIRD-1]
gi|395445033|ref|YP_006385286.1| 30S ribosomal protein S2 [Pseudomonas putida ND6]
gi|421522649|ref|ZP_15969290.1| 30S ribosomal protein S2 [Pseudomonas putida LS46]
gi|431801158|ref|YP_007228061.1| 30S ribosomal protein S2 [Pseudomonas putida HB3267]
gi|38258321|sp|Q88MI0.1|RS2_PSEPK RecName: Full=30S ribosomal protein S2
gi|166226742|sp|A5W850.1|RS2_PSEP1 RecName: Full=30S ribosomal protein S2
gi|24983071|gb|AAN67212.1|AE016348_4 ribosomal protein S2 [Pseudomonas putida KT2440]
gi|148513450|gb|ABQ80310.1| SSU ribosomal protein S2P [Pseudomonas putida F1]
gi|313500241|gb|ADR61607.1| RpsB [Pseudomonas putida BIRD-1]
gi|338836956|gb|AEJ11761.1| 30S ribosomal protein S2 [Pseudomonas putida S16]
gi|388559030|gb|AFK68171.1| 30S ribosomal protein S2 [Pseudomonas putida ND6]
gi|402753749|gb|EJX14242.1| 30S ribosomal protein S2 [Pseudomonas putida LS46]
gi|430791923|gb|AGA72118.1| 30S ribosomal protein S2 [Pseudomonas putida HB3267]
Length = 245
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHI+NLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIVNLEKTLPMFNDALSFVERLAQGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A +A R G P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGR 225
>gi|374703802|ref|ZP_09710672.1| 30S ribosomal protein S2 [Pseudomonas sp. S9]
Length = 247
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/218 (54%), Positives = 166/218 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGSRNKIHIINLEKTLPMFNDALSFVEKLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R PF+D RWLGG+LTN+KTI+ SI+RL+++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCNSPFVDHRWLGGMLTNYKTIRASIKRLRDLEVQAQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN SP+G++Y+IPGNDD+ ++I LY + DA + ++
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIQLYMGAMADAVVRGRS 226
>gi|170723243|ref|YP_001750931.1| 30S ribosomal protein S2 [Pseudomonas putida W619]
gi|229470519|sp|B1JBR0.1|RS2_PSEPW RecName: Full=30S ribosomal protein S2
gi|169761246|gb|ACA74562.1| ribosomal protein S2 [Pseudomonas putida W619]
Length = 245
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K ++
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALSFVERLAQGKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A +A R G P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGR 225
>gi|345874684|ref|ZP_08826484.1| hypothetical protein l11_05650 [Neisseria weaveri LMG 5135]
gi|417958072|ref|ZP_12600989.1| hypothetical protein l13_14010 [Neisseria weaveri ATCC 51223]
gi|343967464|gb|EGV35709.1| hypothetical protein l13_14010 [Neisseria weaveri ATCC 51223]
gi|343970043|gb|EGV38241.1| hypothetical protein l11_05650 [Neisseria weaveri LMG 5135]
Length = 239
Score = 266 bits (681), Expect = 4e-68, Method: Composition-based stats.
Identities = 132/237 (55%), Positives = 174/237 (73%), Gaps = 2/237 (0%)
Query: 586 EKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRG 645
+ +Y +LK GEALM DA+ IN I I+ ++ E+V G+++A+VIGGGNI RG
Sbjct: 4 QTKYKRVLLKLS--GEALMGKDAFGINRETIMQIVGQVKEVVDMGVQVAVVIGGGNIFRG 61
Query: 646 ISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAI 705
++ + Q +DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI
Sbjct: 62 VATQAQGMDRATADYMGMMATVMNALALKDAFESLGIKARVQSALSMQQIAETYARPKAI 121
Query: 706 KYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAII 765
+YLEEGKVVIFA G GNPFFTTDT A+LR AE+ +I+LKAT VDG+Y +DP K SA
Sbjct: 122 QYLEEGKVVIFAAGTGNPFFTTDTAASLRGAEMNCDIMLKATNVDGVYTADPKKDPSATR 181
Query: 766 YKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
Y+ ITFDE ISK L +MD+TAF+ CR+QKL I VF I K GALKRVI G++EGTLV+
Sbjct: 182 YQTITFDEAISKNLRVMDATAFALCREQKLNIVVFGIAKEGALKRVIAGEDEGTLVH 238
>gi|294669738|ref|ZP_06734804.1| hypothetical protein NEIELOOT_01638 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308304|gb|EFE49547.1| hypothetical protein NEIELOOT_01638 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 239
Score = 266 bits (681), Expect = 4e-68, Method: Composition-based stats.
Identities = 128/237 (54%), Positives = 177/237 (74%), Gaps = 2/237 (0%)
Query: 586 EKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRG 645
+ +Y +LK GEALM DA+ IN I I+ ++ EIV G+++ IVIGGGNI RG
Sbjct: 4 QTKYKRILLKLS--GEALMGNDAFGINRETIMQIVGQVKEIVELGVQVGIVIGGGNIFRG 61
Query: 646 ISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAI 705
+S + N+DR+TADYMGM+AT++N+LAL D +G+ + V SA+ +++ E+Y AI
Sbjct: 62 VSTQADNMDRATADYMGMMATVMNALALKDAFESAGVKARVQSALPMQQIAETYARPKAI 121
Query: 706 KYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAII 765
+YL+EGKVVIFAGG GNPFFTTDT A+LR AE+ +++LKAT VDG+Y +DP K SA+
Sbjct: 122 QYLKEGKVVIFAGGTGNPFFTTDTAASLRGAEMNCDVMLKATNVDGVYTADPKKDPSAVR 181
Query: 766 YKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
Y+ ITFDE +SK+L++MD+TAF+ CR+++L I VF I K GALKRV+ G+NEGTLV+
Sbjct: 182 YETITFDEALSKRLKVMDATAFALCRERQLNIVVFGIAKEGALKRVVCGENEGTLVH 238
>gi|107103170|ref|ZP_01367088.1| hypothetical protein PaerPA_01004239 [Pseudomonas aeruginosa PACS2]
Length = 246
Score = 266 bits (681), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNP+M +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPEMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + +A + K
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGK 225
>gi|119505666|ref|ZP_01627736.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080]
gi|119458478|gb|EAW39583.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2080]
Length = 258
Score = 266 bits (680), Expect = 4e-68, Method: Composition-based stats.
Identities = 120/217 (55%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ + A++ + +L +K ++
Sbjct: 9 LLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALKQVQRLASNKSNIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI +A R GMPF+ RWLGG+LTN+KT+++SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRAAGKVIEEQAARCGMPFVSHRWLGGMLTNYKTVRSSIKRLRELEEQEADGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R + KL+R +GGIK+M +PD +F+IDV + + A++EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRSKEKLDRSVGGIKDMTGLPDVLFVIDVDHERIAITEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDGI+YVIPGNDD+ ++I LY K + DA L+ K
Sbjct: 189 TNSNPDGIDYVIPGNDDAIRAIRLYVKAVADAVLEGK 225
>gi|359787448|ref|ZP_09290495.1| 30S ribosomal protein S2 [Halomonas sp. GFAJ-1]
gi|359295265|gb|EHK59540.1| 30S ribosomal protein S2 [Halomonas sp. GFAJ-1]
Length = 250
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQT++WNPKM +IFG RNKIHIINLE TL +A+ I ++ S +L
Sbjct: 9 LLKAGAHFGHQTKYWNPKMGKFIFGARNKIHIINLEHTLPALNEAVDVIEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R G PF++ RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSASKIIKEEANRVGQPFVNHRWLGGMLTNFKTIRQSIKRLRELEVMREDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYVKAIADACNRAK 225
>gi|104783195|ref|YP_609693.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48]
gi|123380812|sp|Q1I626.1|RS2_PSEE4 RecName: Full=30S ribosomal protein S2
gi|95112182|emb|CAK16909.1| 30S ribosomal protein S2 [Pseudomonas entomophila L48]
Length = 245
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K ++
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERLAQGKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A +A R G P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G+++VIPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDFVIPGNDDAIRAIELYMTSMADAVIRGR 225
>gi|398846485|ref|ZP_10603455.1| ribosomal protein S2 [Pseudomonas sp. GM84]
gi|398252517|gb|EJN37704.1| ribosomal protein S2 [Pseudomonas sp. GM84]
Length = 245
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 117/217 (53%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNKIHIINLEKTL M+ A+ ++ +L K ++
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNDALAFVERLAQGKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A +A R G P++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQADDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G+++VIPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPEGVDFVIPGNDDAIRAIELYMTSMADAVIRGR 225
>gi|374620390|ref|ZP_09692924.1| ribosomal protein S2 [gamma proteobacterium HIMB55]
gi|374303617|gb|EHQ57801.1| ribosomal protein S2 [gamma proteobacterium HIMB55]
Length = 257
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 172/233 (73%), Gaps = 5/233 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ + A+ +I +L +K +
Sbjct: 8 ELLQAGAHFGHQTRFWNPKMDQYIFGARNKIHIINLEHTVPAFNDALGFIQRLAENKNQI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR A +I +A R GMP++ RWLGG+LTN+KTI++SI+RL++++ +G+
Sbjct: 68 MFVGTKRAAGKIIQEQAERCGMPYVSHRWLGGMLTNYKTIRSSIKRLRDLETQEQDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R + KL+R IGGIK+M +PDA+F++DV + + A++EA KL IP+IG+V
Sbjct: 128 KLTKKEALMRSRSKDKLDRSIGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
DTN PDG++Y+IPGNDD+ ++I LY + DA + K + + AP+++
Sbjct: 188 DTNSDPDGVDYIIPGNDDAIRAIKLYVTAVADAVMAGKG-----ASSEAPVVD 235
>gi|352086338|ref|ZP_08953879.1| ribosomal protein S2 [Rhodanobacter sp. 2APBS1]
gi|389798395|ref|ZP_10201412.1| 30S ribosomal protein S2 [Rhodanobacter sp. 116-2]
gi|351679637|gb|EHA62774.1| ribosomal protein S2 [Rhodanobacter sp. 2APBS1]
gi|388445003|gb|EIM01091.1| 30S ribosomal protein S2 [Rhodanobacter sp. 116-2]
Length = 290
Score = 265 bits (678), Expect = 7e-68, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ L +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTSRWLGGMLTNFRTVKQSVSRLKELEAAETDGSFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDA+F+ID+G+ AV EA KL IP+I VV
Sbjct: 128 KLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ ++I LY + D+ L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|359394092|ref|ZP_09187145.1| 30S ribosomal protein S2 [Halomonas boliviensis LC1]
gi|357971339|gb|EHJ93784.1| 30S ribosomal protein S2 [Halomonas boliviensis LC1]
Length = 249
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQT++WNPKMS +IFG RNKIHIINLE TL +AI + ++ S +L
Sbjct: 9 LLKAGAHFGHQTKYWNPKMSKFIFGARNKIHIINLEHTLPALNEAIDVVEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI EA RAG F++ RWLGG+LTNFKTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSASKVIKEEANRAGQHFVNHRWLGGMLTNFKTIRQSIKRLRDLEAMREDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLVATREQEKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYVKAIADACGRAK 225
>gi|352106682|ref|ZP_08961625.1| 30S ribosomal protein S2 [Halomonas sp. HAL1]
gi|350597725|gb|EHA13853.1| 30S ribosomal protein S2 [Halomonas sp. HAL1]
Length = 249
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQT++WNPKMS +IFG RNKIHIINLE TL +AI + ++ S +L
Sbjct: 9 LLKAGAHFGHQTKYWNPKMSKFIFGARNKIHIINLEHTLPALNEAIDVVEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI EA RAG F++ RWLGG+LTNFKTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSASKVIKEEANRAGQHFVNHRWLGGMLTNFKTIRQSIKRLRDLETMREDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLVATREQEKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYVKAIADACGRAK 225
>gi|237800144|ref|ZP_04588605.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023001|gb|EGI03058.1| 30S ribosomal protein S2 [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 246
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 165/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQ R+WNP M+ YIFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGCHFGHQKRYWNPLMAKYIFGARNKIHIINLEKTLPMFNEALTFVERLASGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++A EA R G P++D RWLGG+LTNFKTI+ SI+RL+E+++ +G+ K
Sbjct: 69 FVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEIQSEDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL+R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP GI+Y+IPGNDD+ ++I LY + DA + +
Sbjct: 189 TNSSPQGIDYIIPGNDDAIRAIQLYMGSMADAVIRGR 225
>gi|389809712|ref|ZP_10205434.1| 30S ribosomal protein S2 [Rhodanobacter thiooxydans LCS2]
gi|388441611|gb|EIL97873.1| 30S ribosomal protein S2 [Rhodanobacter thiooxydans LCS2]
Length = 290
Score = 265 bits (677), Expect = 9e-68, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ L +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTSRWLGGMLTNFRTVKQSVSRLKELEAAETDGSFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDA+F+ID+G+ AV EA KL IP+I VV
Sbjct: 128 KLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ ++I LY + D+ L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|383316036|ref|YP_005376878.1| 30S ribosomal protein S2 [Frateuria aurantia DSM 6220]
gi|379043140|gb|AFC85196.1| ribosomal protein S2 [Frateuria aurantia DSM 6220]
Length = 283
Score = 265 bits (677), Expect = 9e-68, Method: Composition-based stats.
Identities = 120/218 (55%), Positives = 163/218 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDALNFLSGVAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTARWLGGMLTNFRTVKQSVARLKELEAAETDGSFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIKNM +PDA+FI+D+G+ AV EA KL IP++ VV
Sbjct: 128 KLVKHEVLTRRREREKLENSLGGIKNMTRLPDALFIVDIGHEDIAVQEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ ++I LY + DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAIQLYARAAADAILEGK 225
>gi|297538505|ref|YP_003674274.1| uridylate kinase [Methylotenera versatilis 301]
gi|297257852|gb|ADI29697.1| uridylate kinase [Methylotenera versatilis 301]
Length = 238
Score = 265 bits (677), Expect = 1e-67, Method: Composition-based stats.
Identities = 128/222 (57%), Positives = 168/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN + I I++E+ E+V G+++A+VIGGGNI RG++ + +DR+TAD
Sbjct: 15 GEALMGDDAYGINRATITRIVTEVKEVVDLGVQVAVVIGGGNIFRGVAPAAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + G+ + V SA++I + E YI AI+YLEEG+VVIF G
Sbjct: 75 YMGMLATVMNAMALQDAMKNIGLNARVQSALNIAQVAEPYIRGKAIRYLEEGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ AEI++KATKVDGIY DP A+ YK ITFDE I+K L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNAEIVIKATKVDGIYTDDPKTNPEAMRYKTITFDEAINKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI K GALK+V+ G++EGT+V
Sbjct: 195 KVMDATALTLCRDQKLPISVFSIFKQGALKKVVMGEDEGTMV 236
>gi|399544197|ref|YP_006557505.1| 30S ribosomal protein S2 [Marinobacter sp. BSs20148]
gi|399159529|gb|AFP30092.1| 30S ribosomal protein S2 [Marinobacter sp. BSs20148]
Length = 242
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 164/220 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS YIFG RNKIHIINLE+T+ A++++ QL +K +L
Sbjct: 4 LLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEQTVPAMNDALKFVAQLTENKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R+G PF++ RWLGG+LTN+KTI+ SI R +E+ +G+ K
Sbjct: 64 FVGTKRAAAKIIKEEAERSGQPFVNHRWLGGMLTNYKTIRQSIHRYRELQAQSKDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 124 LTKKEALERSREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLGIPVIGVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN +PDG++YVIPGNDD+ ++I +Y K + D L++ VG
Sbjct: 184 TNSNPDGVDYVIPGNDDAIRAIQIYVKAVADTCLESVNVG 223
>gi|339484806|ref|YP_004696592.1| uridylate kinase [Nitrosomonas sp. Is79A3]
gi|338806951|gb|AEJ03193.1| uridylate kinase [Nitrosomonas sp. Is79A3]
Length = 238
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 167/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN +++ I++EI EI G+E+AIV+GGGNI RG+ + ++R TAD
Sbjct: 15 GEALMGEDQYGINHTVMGRIVAEIEEISKLGVEIAIVVGGGNIFRGMKSANDGLERVTAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + G++ + SA+ IE+ +E YI A++YL++G++VIFA G
Sbjct: 75 YMGMLATVMNALALQDAMKLVGLVPRIQSALRIEQVVEPYIRGRAMRYLKDGRIVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +I+LKATKVDGIY SDP A ++K++FDE ISK L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNVDIMLKATKVDGIYTSDPKIDSDATRFQKLSFDEAISKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLP+ VFSI K+GALKR+I G+ EGTLV
Sbjct: 195 QVMDATALTLCRDQKLPLNVFSIFKAGALKRIIMGEEEGTLV 236
>gi|389774312|ref|ZP_10192431.1| 30S ribosomal protein S2 [Rhodanobacter spathiphylli B39]
gi|388437911|gb|EIL94666.1| 30S ribosomal protein S2 [Rhodanobacter spathiphylli B39]
Length = 287
Score = 264 bits (675), Expect = 1e-67, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ ++ L +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR +A EA RAGMPF+ RWLGG+LTNF+T+K S+ RLKE++ T+GS
Sbjct: 68 LFVGTKRSAREPLAEEAARAGMPFVTSRWLGGMLTNFRTVKQSVSRLKELEAAETDGSFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDA+F+ID+G+ AV EA KL IP+I VV
Sbjct: 128 KLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ ++I LY + D+ L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|406936242|gb|EKD70016.1| hypothetical protein ACD_46C00671G0004 [uncultured bacterium]
Length = 267
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 166/220 (75%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+ +++AGVHFGHQTR+WNPKM SYI+G RNKIHII+L KTL +++ A+ +I + KG
Sbjct: 6 QDLLKAGVHFGHQTRYWNPKMGSYIYGSRNKIHIIDLGKTLPLFQDALNFIGGIAAKKGK 65
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK A+ +I EA R MP++++RWLGG+LTN+KTI+ SI+RLKE++ +G
Sbjct: 66 ILFVGTKYAAQDLIQQEAERCKMPYVNRRWLGGMLTNYKTIRQSIKRLKELEAMFDSGKF 125
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+L+KKE L R++ KL +GGIKNM IPDA+F+IDVG+ K AV EA +L IP+IGV
Sbjct: 126 GRLTKKEILGLEREKAKLLISLGGIKNMGGIPDALFVIDVGHEKIAVREANRLGIPVIGV 185
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
VD+N+ PDGI+Y+IPGNDDS ++I YT + DA +A+
Sbjct: 186 VDSNNDPDGISYIIPGNDDSTRAIRYYTSSVADAITEARA 225
>gi|53805191|ref|YP_113086.1| 30S ribosomal protein S2 [Methylococcus capsulatus str. Bath]
gi|61215446|sp|Q60BB0.1|RS2_METCA RecName: Full=30S ribosomal protein S2
gi|53758952|gb|AAU93243.1| ribosomal protein S2 [Methylococcus capsulatus str. Bath]
Length = 256
Score = 264 bits (674), Expect = 2e-67, Method: Composition-based stats.
Identities = 125/229 (54%), Positives = 168/229 (73%), Gaps = 1/229 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T ++++AGVHFGHQTR+WNPKM+ +IFG R+ IHIINLEKTL ++ A++Y+ Q
Sbjct: 1 MTSVT-MRQMLEAGVHFGHQTRYWNPKMAPFIFGARSNIHIINLEKTLPLFNDAMKYLEQ 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ ++G +LFVGTK+ R VI EA R GMP+++ RWLGG+LTNFKTIK SI R+K++
Sbjct: 60 VAANRGKILFVGTKKTMRKVIEEEARRCGMPYVNHRWLGGMLTNFKTIKASIARMKDLQA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G + + SKKEAL R+ KL +GGI +M+ +PD +FIID GY K AVSEA KL
Sbjct: 120 MRDDGRLNRFSKKEALGMMRELEKLVCNVGGIGDMDRLPDVMFIIDTGYEKNAVSEARKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
IP++GVVDTN+SP GI+YVIPGNDDS +++ LY + A L K G
Sbjct: 180 GIPVVGVVDTNNSPVGIDYVIPGNDDSIRAVQLYAQSAATAILRGKASG 228
>gi|399912536|ref|ZP_10780850.1| 30S ribosomal protein S2 [Halomonas sp. KM-1]
Length = 248
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 160/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKM +IFG RNKIHIINLE TL + I + ++ S +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMGKFIFGARNKIHIINLEHTLPALNEVIDVVEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R GMPF++ RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSASKIIKEEANRVGMPFVNHRWLGGMLTNYKTIRQSIKRLRDLETMREDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIK M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSIGGIKEMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSDPDGVDYVIPGNDDSIRAIQIYVKAIADACARAK 225
>gi|192361500|ref|YP_001981606.1| 30S ribosomal protein S2 [Cellvibrio japonicus Ueda107]
gi|238692420|sp|B3PBP6.1|RS2_CELJU RecName: Full=30S ribosomal protein S2
gi|190687665|gb|ACE85343.1| ribosomal protein S2 [Cellvibrio japonicus Ueda107]
Length = 246
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 157/216 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ I Q+ K +L
Sbjct: 9 MLSAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALNLITQMAAQKKKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ I +A RAG PF+ RWLGG+LTN+KTI+ SI+RL ++ +G+ K
Sbjct: 69 FVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRASIRRLSDLTTQSQDGTFAK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R IGGIK M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDMEKLERSIGGIKGMGGLPDAMFVIDVEHERIAIQEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN SP+GI+YVIPGNDD+ ++I LY I DA L+
Sbjct: 189 TNSSPEGIDYVIPGNDDAIRAIKLYATAIADACLEG 224
>gi|226940991|ref|YP_002796065.1| uridylate kinase [Laribacter hongkongensis HLHK9]
gi|226715918|gb|ACO75056.1| PyrH [Laribacter hongkongensis HLHK9]
Length = 238
Score = 264 bits (674), Expect = 2e-67, Method: Composition-based stats.
Identities = 126/223 (56%), Positives = 168/223 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y IN ++I+ I+S+I E+ G+E+ +VIGGGNI RG+S +DR+TAD
Sbjct: 15 GEALMGDDPYGINHAVIQEIVSQIKEVSELGVEIGVVIGGGNIFRGVSTAAAGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D + K+G+ + V SA+++++ E YI A++YL+EGKVVIFA G
Sbjct: 75 YMGMMATVMNALALKDAMTKAGMTARVQSALTMQQIAEPYIRGKAMQYLQEGKVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +++LKATKVDG+Y DP K A Y +TFDE I K L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNVDVMLKATKVDGVYTDDPKKNPDAERYTSLTFDEAIVKNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MDSTA + CRDQKL I+VFSI K GALKRV+ G++EGTLV+
Sbjct: 195 KVMDSTALALCRDQKLNIKVFSIFKQGALKRVVLGEDEGTLVH 237
>gi|335043533|ref|ZP_08536560.1| ribosomal protein S2 [Methylophaga aminisulfidivorans MP]
gi|333790147|gb|EGL56029.1| ribosomal protein S2 [Methylophaga aminisulfidivorans MP]
Length = 250
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 162/223 (72%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTR+WNPKM YIFG RN IHIINLE +L M+ A+ ++ +L
Sbjct: 4 TTMRQMLEAGVHFGHQTRYWNPKMGPYIFGKRNNIHIINLEHSLPMFNDALNFVSKLASK 63
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
KG ++FVGTKR A+ I +A RAGMP++++RWLGG+LTNF+T++ SI+RL + I +
Sbjct: 64 KGRIMFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNFQTVRQSIKRLDAIQDMIES 123
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G L KKE L R+Q KL + IGGI+ M +PDA+F+IDV + + A+ EA KL IP+
Sbjct: 124 GKTEGLKKKEVLDLAREQEKLEKSIGGIRKMTGLPDAMFVIDVEHERIAIQEARKLGIPV 183
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
I VVD+N +PDG++YVIPGNDDS ++I LYT I DA L+ +
Sbjct: 184 IAVVDSNSNPDGVDYVIPGNDDSMRAIRLYTANIADAILEGRA 226
>gi|58426194|gb|AAW75231.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 375
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 160/221 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+P M+ YIFG R KIHIINLEKT+ ++ A+ Y+ + +GT+
Sbjct: 116 QMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRGTI 175
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 176 LFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 235
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 236 KLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 295
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 296 DTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAA 336
>gi|3417446|dbj|BAA32342.1| ribosomal protein S2 [Pseudomonas aeruginosa]
Length = 280
Score = 263 bits (673), Expect = 3e-67, Method: Composition-based stats.
Identities = 118/217 (54%), Positives = 166/217 (76%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLEKTL M+ +A+ ++ +L K +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMGKFIFGARNKIHIINLEKTLPMFNEALTFVERLAAGKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSAGKIVREEAARCGMPYVDHRWLGGMLTNYKTIRQSIKRLRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R +GGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRSRDLEKLERSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SP+G++YVIPGNDD+ +++ LY + +A + K
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAVQLYLNSMAEAVIRGK 225
>gi|292492488|ref|YP_003527927.1| 30S ribosomal protein S2 [Nitrosococcus halophilus Nc4]
gi|291581083|gb|ADE15540.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4]
Length = 269
Score = 263 bits (672), Expect = 3e-67, Method: Composition-based stats.
Identities = 118/216 (54%), Positives = 167/216 (77%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+WNPKM+ YIFG RN IHIINLE+TL +Y +A ++ +L +KGT+
Sbjct: 8 QMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYNEATNFLGRLAANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I EA R GMP++++RWLGG+LTNF+T++ SI+RL +++ I +GS+
Sbjct: 68 LFVGTKRAAQEAIHEEAERCGMPYVNRRWLGGMLTNFQTVRRSIKRLHDLEAMIQDGSLE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L K+EAL R++ KL +GGIKNM +PDA+FIIDV + + AV EA KL IP++ VV
Sbjct: 128 RLKKREALTVRRERDKLENSLGGIKNMTHLPDALFIIDVEHERIAVDEAAKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLD 390
DTN SP ++Y+IPGNDDS +++ LY +GI DA ++
Sbjct: 188 DTNSSPKKVDYIIPGNDDSIRALRLYARGIADAIVE 223
>gi|126666180|ref|ZP_01737160.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17]
gi|126629502|gb|EBA00120.1| 30S ribosomal protein S2 [Marinobacter sp. ELB17]
Length = 247
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 164/220 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS YIFG RNKIHIINLE+T+ A++++ +L +K +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKYIFGARNKIHIINLEQTVPAMNDALKFVARLTENKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R+G PF++ RWLGG+LTN+KTI+ SI R +E+ +G+ K
Sbjct: 69 FVGTKRAAAKIIKEEAERSGQPFVNHRWLGGMLTNYKTIRQSIHRYRELQAQSKDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALERSREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN +PDG++YVIPGNDD+ ++I +Y K + D L++ VG
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAIQIYVKAVADTCLESVNVG 228
>gi|89092089|ref|ZP_01165044.1| 30S ribosomal protein S2 [Neptuniibacter caesariensis]
gi|89083824|gb|EAR63041.1| 30S ribosomal protein S2 [Oceanospirillum sp. MED92]
Length = 246
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 162/216 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKMS +IFG RNKIHIINLE TL A+ I + +K +L
Sbjct: 9 LLKAGVHFGHQTRYWNPKMSKFIFGARNKIHIINLEHTLPALNGALDNIQNMAANKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA RAGMP+++ RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRAASKIVKEEASRAGMPYVNHRWLGGMLTNYKTIRQSIRRLRDLESQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK M +PDA+F+IDV + + AV+EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRQREMEKLERSIGGIKEMGGLPDALFVIDVDHERIAVNEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN +PDG++ VIPGNDD+ ++I +Y K DA L+
Sbjct: 189 TNSNPDGVDVVIPGNDDALRAIQIYVKSAADACLEG 224
>gi|338999276|ref|ZP_08637926.1| 30S ribosomal protein S2 [Halomonas sp. TD01]
gi|338763840|gb|EGP18822.1| 30S ribosomal protein S2 [Halomonas sp. TD01]
Length = 249
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 161/217 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQT++WNPKM +IFG RNKIHIINLE TL +AI + ++ S +L
Sbjct: 9 LLKAGAHFGHQTKYWNPKMGKFIFGARNKIHIINLEHTLPALNEAIDVVEKMAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R PF++ RWLGG+LTNFKTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRSASKIIKEEANRVNQPFVNHRWLGGMLTNFKTIRQSIKRLRDLETMREDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+Q KL R IGGIKNM +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMATREQDKLERSIGGIKNMGGLPDALFVIDVDHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDDS ++I +Y K I DA AK
Sbjct: 189 TNSNPDGVDYVIPGNDDSIRAIQIYVKAIADACGRAK 225
>gi|387129691|ref|YP_006292581.1| 30S ribosomal protein S2 [Methylophaga sp. JAM7]
gi|386270980|gb|AFJ01894.1| SSU ribosomal protein S2p (SAe) [Methylophaga sp. JAM7]
Length = 250
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 162/219 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +IFG RN IHI+NLE +L ++ A+ ++ +L KG +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPFIFGKRNNIHIVNLENSLPLFNDALNFVSKLASKKGRI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I +A RAGMP++++RWLGG+LTN++T++ SI+RL + I +G
Sbjct: 68 LFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNYQTVRQSIKRLDAVQEMIESGRTE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE L R+Q KL + IGGI+ M +PDA+F+IDV + + A+ EA KL IP+I VV
Sbjct: 128 GLKKKEVLTLSREQEKLEKSIGGIRKMGGLPDALFVIDVDHERIAIQEANKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN +PDG++YVIPGNDDS ++I LYT I DA L+ +
Sbjct: 188 DTNSNPDGVDYVIPGNDDSMRAIRLYTANIADAILEGRA 226
>gi|325923979|ref|ZP_08185568.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865]
gi|325545562|gb|EGD16827.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865]
Length = 279
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 116/221 (52%), Positives = 159/221 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAA 228
>gi|82701792|ref|YP_411358.1| uridylate kinase [Nitrosospira multiformis ATCC 25196]
gi|123768286|sp|Q2YBA5.1|PYRH_NITMU RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|82409857|gb|ABB73966.1| uridylate kinase [Nitrosospira multiformis ATCC 25196]
Length = 238
Score = 262 bits (670), Expect = 6e-67, Method: Composition-based stats.
Identities = 123/222 (55%), Positives = 174/222 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN +I+ I++EI+E+ G+E+A+VIGGGNI RG+++ + +DR+TAD
Sbjct: 15 GEALMGDDSYGINRDVIERIVAEIAEVNQLGVEVAVVIGGGNIFRGMTSSAEGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + ++G++S V SA+ I++ +E YI AI+YLEEGK+VIFA G
Sbjct: 75 YMGMLATVMNALALQDAMRRAGLVSRVQSALRIDQVVEPYIRGKAIRYLEEGKIVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +I+LKATKVDG+Y +DP A Y++++FD I++ L
Sbjct: 135 TGNPFFTTDTAAALRGMEMNVDIVLKATKVDGVYTTDPKINPDAERYQRLSFDTAIAENL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLP++VFSI K+ AL+RV+ G+ EGTLV
Sbjct: 195 KVMDATALTLCRDQKLPLKVFSIFKAEALRRVVMGEEEGTLV 236
>gi|209573688|sp|A5WCX2.2|RS2_PSYWF RecName: Full=30S ribosomal protein S2
Length = 262
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 158/221 (71%)
Query: 172 PAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSK 231
P ++QAG HFGHQTRFWNPKM+ YIFG RNKIHIINLE T+ + +A+ Y+ L
Sbjct: 9 PMRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKN 68
Query: 232 GTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNG 291
+LFVGTKR A GVI +A+RAG P++D RWLGG+LTN+KT++ SI RLKE++ +G
Sbjct: 69 NKVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDG 128
Query: 292 SIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPII 351
+ KL+K+EAL R KL R +GGIKNM +PDAIF++DV + A+ EA L IP+I
Sbjct: 129 TFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVI 188
Query: 352 GVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
G+VDTN +PD ++Y+IP NDD+ +++ LY + DA + K
Sbjct: 189 GIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGK 229
>gi|372271446|ref|ZP_09507494.1| 30S ribosomal protein S2 [Marinobacterium stanieri S30]
Length = 245
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 164/219 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKMS +IFG RNKIHIINLE TL A+ I + +K +L
Sbjct: 9 LLKAGVHFGHQTRYWNPKMSKFIFGARNKIHIINLEHTLPALNNALDVIQGMASNKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI EA RAGMP+++ RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 69 FVGTKRAASKVIKEEASRAGMPYVNHRWLGGMLTNYKTIRQSIRRLRDLETQAQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL IGGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTREMEKLELSIGGIKDMGGLPDALFVIDVEHERIAINEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN +PDGI++VIPGNDD+ ++I +Y K + DA + +
Sbjct: 189 TNSNPDGIDHVIPGNDDALRAIQIYAKSVADACAEGASA 227
>gi|110834004|ref|YP_692863.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2]
gi|123050547|sp|Q0VQF7.1|RS2_ALCBS RecName: Full=30S ribosomal protein S2
gi|110647115|emb|CAL16591.1| 30S ribosomal protein S2 [Alcanivorax borkumensis SK2]
Length = 252
Score = 262 bits (670), Expect = 7e-67, Method: Composition-based stats.
Identities = 122/230 (53%), Positives = 170/230 (73%), Gaps = 1/230 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T +++AGVHFGHQTR+WNPKM++YIFG RNKIHIINLE+TL ++ A+ ++ +
Sbjct: 1 MSSVT-MRDMLKAGVHFGHQTRYWNPKMNTYIFGARNKIHIINLEQTLPLFNDAMAFLNK 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L S +LFVGTKR A+ ++ EA R GMP++D RWLGG+LTN+KTI+ SI+R +E++
Sbjct: 60 LAASNNKILFVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+ KL+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + A+ EA KL
Sbjct: 120 QFQDGTFDKLTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
IP++ VVDTN +PDG++YVIPGNDD+ ++I LY K D L+ K +
Sbjct: 180 GIPVVAVVDTNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQ 229
>gi|198283284|ref|YP_002219605.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667004|ref|YP_002425872.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415977838|ref|ZP_11559026.1| 30S ribosomal protein S2 [Acidithiobacillus sp. GGI-221]
gi|198247805|gb|ACH83398.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519217|gb|ACK79803.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339834143|gb|EGQ61927.1| 30S ribosomal protein S2 [Acidithiobacillus sp. GGI-221]
Length = 250
Score = 262 bits (670), Expect = 7e-67, Method: Composition-based stats.
Identities = 129/251 (51%), Positives = 173/251 (68%), Gaps = 2/251 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S +++AGVHFGHQ+R+W+PKM+ Y+FG RN+IHIINLE TL M A+ ++ Q
Sbjct: 1 MSSNVTMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQ 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ G +LFVGTKRQAR + EA R+G F++QRWLGG LTNFKTI+ SI+RL E+D
Sbjct: 61 ISRKHGRILFVGTKRQAREAVEQEARRSGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQ 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G++ KL+KKE L R++ KL R +GGIK+MN +PDAIF+IDVG+ AV EA KL
Sbjct: 121 MTADGTMEKLTKKEGLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIM 406
IP+IGVVD+N P I++ IPGNDD+ ++I LY + DA LD + GE S L +
Sbjct: 181 GIPVIGVVDSNCDPLLIDFPIPGNDDATRAIRLYASLVADAILDGRQGGE--SGLLDEFV 238
Query: 407 ECKKALIEANG 417
E + IE +
Sbjct: 239 EVDEETIEIDA 249
>gi|149925818|ref|ZP_01914082.1| putative transcription modulator protein [Limnobacter sp. MED105]
gi|149825935|gb|EDM85143.1| putative transcription modulator protein [Limnobacter sp. MED105]
Length = 200
Score = 262 bits (669), Expect = 7e-67, Method: Composition-based stats.
Identities = 119/178 (66%), Positives = 152/178 (85%), Gaps = 3/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+DIDLFN+PD+I MNPY QVPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIKDIDLFNRPDDISVMNPYSQVPILVERDLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFE+E+F H+ +LE N K +A+ IR++L LAP+FLK+KYM
Sbjct: 85 VMRARTRLFLFNFERELFQHVSVLEKAGNP---KAMDKAKSAIREQLTQLAPVFLKSKYM 141
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSMLDV +APLLWRL++YGI L KSA+PL+KYAERIF++P+++++LTP+EK+M+
Sbjct: 142 LGEDFSMLDVALAPLLWRLEHYGIELPKSAAPLMKYAERIFAKPAFIDALTPSEKVMR 199
>gi|387127006|ref|YP_006295611.1| 30S ribosomal protein S2 [Methylophaga sp. JAM1]
gi|386274068|gb|AFI83966.1| SSU ribosomal protein S2p (SAe) [Methylophaga sp. JAM1]
Length = 250
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 160/219 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM +IFG RN IHI+NLE +L M+ A+ Y+ +L KG +
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMGPFIFGKRNNIHIVNLEHSLPMFNDALNYVSKLASKKGRI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I +A R GMP++++RWLGG+LTN++T++ SI+RL+ + I +G
Sbjct: 68 LFVGTKRAAQDAIREDAERCGMPYVNRRWLGGMLTNYQTVRQSIKRLEAIQAMIESGKTE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE L R+Q KL + IGGI+ M +PDA+F+IDV + + A+ EA KL IP+I VV
Sbjct: 128 GLKKKEVLNLSREQEKLEKSIGGIRKMGNLPDALFVIDVDHERIAIQEANKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN +PDG++YVIPGNDDS ++I LYT I D L+ +
Sbjct: 188 DTNSNPDGVDYVIPGNDDSMRAIRLYTANIADTVLEGRA 226
>gi|261856050|ref|YP_003263333.1| 30S ribosomal protein S2 [Halothiobacillus neapolitanus c2]
gi|261836519|gb|ACX96286.1| ribosomal protein S2 [Halothiobacillus neapolitanus c2]
Length = 244
Score = 261 bits (668), Expect = 1e-66, Method: Composition-based stats.
Identities = 117/237 (49%), Positives = 170/237 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNP M+ YIFG RN+IHIINLEKT+ M+ A+ +I ++ GT+
Sbjct: 8 QMIEAGVHFGHQTRYWNPGMAPYIFGQRNRIHIINLEKTVPMFNDALNFISKVVGGGGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR AR +A EA R GMP+++ RWLGG++TN+ T++ S++RLK + +GS+
Sbjct: 68 MFVGTKRSARDTVAEEAARCGMPYVNHRWLGGMMTNYATVRQSVRRLKTLQTMEQDGSLA 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKE L+ R++ KL R +GGI++M+ +P+A+F+IDVG+ AV EA KL IP+IG+V
Sbjct: 128 KLNKKEGLMMTREREKLERSLGGIQDMDRLPNALFVIDVGHEDIAVIEAKKLGIPVIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
DTN S GI+YVIPGNDD+ ++I LY + + L+AK + E +A
Sbjct: 188 DTNSSSKGIDYVIPGNDDAIRAIQLYAHAVAETVLEAKGASAIAPSDFVEAAEADQA 244
>gi|148652370|ref|YP_001279463.1| 30S ribosomal protein S2 [Psychrobacter sp. PRwf-1]
gi|148571454|gb|ABQ93513.1| SSU ribosomal protein S2P [Psychrobacter sp. PRwf-1]
Length = 284
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 158/221 (71%)
Query: 172 PAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSK 231
P ++QAG HFGHQTRFWNPKM+ YIFG RNKIHIINLE T+ + +A+ Y+ L
Sbjct: 31 PMRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKN 90
Query: 232 GTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNG 291
+LFVGTKR A GVI +A+RAG P++D RWLGG+LTN+KT++ SI RLKE++ +G
Sbjct: 91 NKVLFVGTKRAASGVIREQALRAGQPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDG 150
Query: 292 SIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPII 351
+ KL+K+EAL R KL R +GGIKNM +PDAIF++DV + A+ EA L IP+I
Sbjct: 151 TFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVI 210
Query: 352 GVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
G+VDTN +PD ++Y+IP NDD+ +++ LY + DA + K
Sbjct: 211 GIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGK 251
>gi|374264022|ref|ZP_09622567.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12]
gi|363535589|gb|EHL29038.1| 30S ribosomal protein S2 [Legionella drancourtii LLAP12]
Length = 248
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 169/240 (70%), Gaps = 3/240 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNP+M YIFG RNKIHIINLEKT+ M + Y+ +L +K +
Sbjct: 7 ELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVVNYVGRLASNKAKI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 67 LFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL+R +GGI++M +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 127 GMIKKEALMLTRELEKLDRGLGGIEHMGGLPDALFVVDVGFEHIAVEEARRLKIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKTLAPIMECKKA 411
DTN+SP+ I+YVIP NDDS +++ +Y + I DA LDAK TVG + S + +KA
Sbjct: 187 DTNNSPNNIDYVIPANDDSMRAVDIYVRCIADAILDAKNSNTVGGVSSSVEVQGSDAEKA 246
>gi|94500622|ref|ZP_01307152.1| ribosomal protein S2 [Oceanobacter sp. RED65]
gi|94427177|gb|EAT12157.1| ribosomal protein S2 [Oceanobacter sp. RED65]
Length = 246
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 165/218 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKMS YIFG RNKIHIINLE T+ + +A+ + L +L
Sbjct: 9 LLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPAFNEALNVVKGLAAKNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A V+ ++A RAG PF+ RWLGG+LTN+KTI+ SI+RL++++ +G+ +
Sbjct: 69 FVGTKRAASKVMQDQASRAGQPFVAHRWLGGMLTNYKTIRQSIKRLRDLEAQQKDGTFEQ 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN +PDG+++VIPGNDD+ ++I ++T I DA ++ KT
Sbjct: 189 TNSNPDGVDHVIPGNDDAIRAIEIFTTAIADACIEGKT 226
>gi|194365044|ref|YP_002027654.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia R551-3]
gi|238693464|sp|B4SQ23.1|RS2_STRM5 RecName: Full=30S ribosomal protein S2
gi|194347848|gb|ACF50971.1| ribosomal protein S2 [Stenotrophomonas maltophilia R551-3]
Length = 267
Score = 261 bits (668), Expect = 1e-66, Method: Composition-based stats.
Identities = 118/218 (54%), Positives = 164/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF++QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY++ DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYSRAAADAVLEGK 225
>gi|254428035|ref|ZP_05041742.1| ribosomal protein S2 [Alcanivorax sp. DG881]
gi|196194204|gb|EDX89163.1| ribosomal protein S2 [Alcanivorax sp. DG881]
Length = 247
Score = 261 bits (668), Expect = 1e-66, Method: Composition-based stats.
Identities = 119/221 (53%), Positives = 166/221 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM++YIFG RNKIHIINLE+TL ++ A+ ++ +L S +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMNAYIFGARNKIHIINLEQTLPLFNDAMAFLNKLAASNNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ ++ EA R GMP++D RWLGG+LTN+KTI+ SI+R +E++ +G+ K
Sbjct: 64 FVGTKRAAQKAVSEEAQRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRELEAQFQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + A+ EA KL IP++ VVD
Sbjct: 124 LTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLGIPVVAVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
TN +PDG++YVIPGNDD+ ++I LY K D L+ K +
Sbjct: 184 TNSNPDGVDYVIPGNDDAIRAIQLYVKAAADVILEGKQYAQ 224
>gi|400289089|ref|ZP_10791121.1| 30S ribosomal protein S2 [Psychrobacter sp. PAMC 21119]
Length = 267
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 160/224 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ + +A+ Y+ L K +L
Sbjct: 14 LLQAGAHFGHQTRFWNPKMGPYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKKNKVL 73
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A G+I +A RAGMP++D RWLGG+LTN+KT++ SI RLKE++ +G+ K
Sbjct: 74 FVGTKRAASGIIREQAARAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDGTFAK 133
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R KL R +GGIK+M +PDAIF++DV + A+ EA L IP+IG+VD
Sbjct: 134 LTKREALERTRDMEKLERSLGGIKDMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVIGIVD 193
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
TN +PD ++Y+IP NDD+ +++ LY + DA + K + ++
Sbjct: 194 TNSNPDNVDYIIPANDDAIRAVTLYVTSMADAIIAGKEYAQTQA 237
>gi|372489318|ref|YP_005028883.1| uridylate kinase [Dechlorosoma suillum PS]
gi|359355871|gb|AEV27042.1| uridylate kinase [Dechlorosoma suillum PS]
Length = 242
Score = 261 bits (667), Expect = 1e-66, Method: Composition-based stats.
Identities = 141/243 (58%), Positives = 177/243 (72%), Gaps = 2/243 (0%)
Query: 580 IPKKIIEKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGG 639
+P + Y +LK GEALM DAY IN I I++EI E+ G+E+ +VIGG
Sbjct: 1 MPDTTPQPAYKRILLKLS--GEALMGSDAYGINRQTISEIVAEIKEVAELGVEVGVVIGG 58
Query: 640 GNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESY 699
GNI RG++ +DR+TADYMGMLAT++N LAL D + +G+ S V SA+ IE+ +E Y
Sbjct: 59 GNIFRGVAPAATGMDRATADYMGMLATVMNGLALQDAMRMAGLNSRVQSALDIEQVVEPY 118
Query: 700 IPLNAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNK 759
I AI+YLE+G++VIFA G GNPFFTTDT AALR AEI A+I+LKATKVDGIY +DP K
Sbjct: 119 IRGKAIRYLEQGRIVIFAAGTGNPFFTTDTAAALRGAEIGAQIVLKATKVDGIYTADPKK 178
Query: 760 CLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGT 819
SA Y KI+FDE I++ L +MD+TAF+ CRDQKLPI VFSI KSGALKRV+ G+ EGT
Sbjct: 179 DPSATRYDKISFDEAIARNLAVMDATAFALCRDQKLPINVFSIFKSGALKRVVLGEAEGT 238
Query: 820 LVY 822
LVY
Sbjct: 239 LVY 241
>gi|372268620|ref|ZP_09504668.1| 30S ribosomal protein S2 [Alteromonas sp. S89]
Length = 249
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 159/214 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A++ I + K +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMGEYIFGARNKIHIINLEHTVPAFNEALQVIKGMAAQKKKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ I +A RAG P++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAQKSIKEQAERAGQPYVSNRWLGGMLTNYKTIRASIKRFRDLEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R IGGIK+M +PD +F+IDV + + A+ EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRTMEKLERSIGGIKDMGGLPDVLFVIDVEHERIAIQEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFL 389
TN SP+G++YVIPGNDD+ ++I LYT + DA L
Sbjct: 189 TNSSPEGVDYVIPGNDDAIRAIKLYTTAVADAVL 222
>gi|408373495|ref|ZP_11171191.1| 30S ribosomal protein S2 [Alcanivorax hongdengensis A-11-3]
gi|407766663|gb|EKF75104.1| 30S ribosomal protein S2 [Alcanivorax hongdengensis A-11-3]
Length = 254
Score = 261 bits (667), Expect = 1e-66, Method: Composition-based stats.
Identities = 120/221 (54%), Positives = 165/221 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM++YIFG RNKIHIINLEKTL ++ A+ ++ +L S +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMNTYIFGARNKIHIINLEKTLPLFNDAMAFLNKLAASNNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ + EA RAGMP++D RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAQKAVREEAQRAGMPYVDHRWLGGMLTNWKTIRQSIKRYRDLEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + A+ EA KL IP++ VVD
Sbjct: 129 LTKKEALMRKREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIALQEARKLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
TN PDG++YVIPGNDD+ ++I LY K D L+ K +
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIQLYVKAAADTILEGKQYAQ 229
>gi|254525018|ref|ZP_05137073.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14]
gi|219722609|gb|EED41134.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14]
Length = 268
Score = 261 bits (667), Expect = 1e-66, Method: Composition-based stats.
Identities = 118/218 (54%), Positives = 163/218 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF++QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|257094442|ref|YP_003168083.1| uridylate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257046966|gb|ACV36154.1| uridylate kinase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 240
Score = 261 bits (667), Expect = 1e-66, Method: Composition-based stats.
Identities = 136/222 (61%), Positives = 170/222 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM GDAY IN I I+ EI +V G+++ +VIGGGNI RG++ +DR+ AD
Sbjct: 17 GEALMGGDAYGINRQTISGIVDEIKVVVDMGVQVGVVIGGGNIFRGVAPAATGMDRAQAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N LAL D + +G++S V SA++IE+ +E YI AI+YLE+G+ VIFA G
Sbjct: 77 YIGMLATVMNGLALHDAMRAAGMVSRVQSALNIEQVVEPYIRGKAIRYLEQGRTVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI AEI+LKATKVDGIY++DP K A+ Y +ITFDEVI++ L
Sbjct: 137 TGNPFFTTDTAAALRGAEIGAEIVLKATKVDGIYSADPKKDPHAVRYDRITFDEVIAQNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
IMD+TAF+ CRDQKLPI VFSI K GALKRV G+NEGTLV
Sbjct: 197 AIMDATAFALCRDQKLPINVFSIFKQGALKRVTMGENEGTLV 238
>gi|190573503|ref|YP_001971348.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a]
gi|386717753|ref|YP_006184079.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia D457]
gi|408824918|ref|ZP_11209808.1| 30S ribosomal protein S2 [Pseudomonas geniculata N1]
gi|424667771|ref|ZP_18104796.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia Ab55555]
gi|229559896|sp|B2FIA9.1|RS2_STRMK RecName: Full=30S ribosomal protein S2
gi|190011425|emb|CAQ45043.1| putative 30S ribosomal protein S2 [Stenotrophomonas maltophilia
K279a]
gi|384077315|emb|CCH11901.1| SSU ribosomal protein S2p (SAe) [Stenotrophomonas maltophilia D457]
gi|401068033|gb|EJP76557.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia Ab55555]
gi|456733857|gb|EMF58679.1| SSU ribosomal protein S2p (SAe) [Stenotrophomonas maltophilia EPM1]
Length = 268
Score = 261 bits (667), Expect = 2e-66, Method: Composition-based stats.
Identities = 118/218 (54%), Positives = 163/218 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF++QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|270160171|ref|ZP_06188827.1| ribosomal protein S2 [Legionella longbeachae D-4968]
gi|289165056|ref|YP_003455194.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150]
gi|269988510|gb|EEZ94765.1| ribosomal protein S2 [Legionella longbeachae D-4968]
gi|288858229|emb|CBJ12097.1| 30S ribosomal protein S2 [Legionella longbeachae NSW150]
Length = 253
Score = 261 bits (667), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/224 (53%), Positives = 162/224 (72%), Gaps = 3/224 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNP+M YIFG RNKIHIINLEKT+ M + Y+ +L +K +
Sbjct: 7 ELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVLNYVGRLASNKAKI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 67 LFVGTKRAAQESIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL R +GGI+NM +PDA+F++DVG+ AV EA +L IP+IG+V
Sbjct: 127 DMIKKEALMLTRELEKLERGLGGIENMGGLPDALFVVDVGFEHIAVEEAHRLRIPVIGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVG 395
DTN+SP I+Y+IPGNDDS +++ +Y + + DA LDAK TVG
Sbjct: 187 DTNNSPKNIDYIIPGNDDSMRAVDIYVRCVADAILDAKGSNTVG 230
>gi|344206673|ref|YP_004791814.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia JV3]
gi|343778035|gb|AEM50588.1| ribosomal protein S2 [Stenotrophomonas maltophilia JV3]
Length = 268
Score = 261 bits (666), Expect = 2e-66, Method: Composition-based stats.
Identities = 118/218 (54%), Positives = 163/218 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF++QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|388456531|ref|ZP_10138826.1| 30S ribosomal protein S2 [Fluoribacter dumoffii Tex-KL]
Length = 254
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 173/253 (68%), Gaps = 9/253 (3%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGH+TRFWNP+M YIFG RNKIHIINLEKT+ M + Y+ +L +K +
Sbjct: 8 ELLEAGAHFGHRTRFWNPEMGEYIFGSRNKIHIINLEKTMVMLNDVVNYVGRLASNKAKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I A R GMP++D RWLGG+LTN+KT++ SI RLKE+ G
Sbjct: 68 LFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKEAL+ R+ KL + +GGI+NM +PDA+F++DVG+ AV EA +L IP+IGVV
Sbjct: 128 GMIKKEALMLTRELEKLEKGLGGIENMGGLPDALFVVDVGFEHIAVEEAHRLKIPVIGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK---TVGELRSKTLAPIMECKKA 411
DTN+SP I+Y+IPGNDDS +++ +Y + I DA LDAK TVG S A +E
Sbjct: 188 DTNNSPRNIDYIIPGNDDSMRAVDIYVRCIADAILDAKGSNTVGVGSSD--AEFVE---- 241
Query: 412 LIEANGKLSKAEE 424
++E G KA E
Sbjct: 242 VVEQTGDAEKAGE 254
>gi|120555459|ref|YP_959810.1| 30S ribosomal protein S2 [Marinobacter aquaeolei VT8]
gi|387814876|ref|YP_005430363.1| 30S ribosomal protein S2 [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|166225283|sp|A1U3Q4.1|RS2_MARAV RecName: Full=30S ribosomal protein S2
gi|120325308|gb|ABM19623.1| SSU ribosomal protein S2P [Marinobacter aquaeolei VT8]
gi|381339893|emb|CCG95940.1| 30S ribosomal subunit protein S2 [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 250
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 162/216 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS +IFG RNKIHIINLE+T+ +A+ +I L +K +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNEALNFIQSLAENKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA R+G P+++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAASKIIKEEAQRSGQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALERTREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN PDG++YVIPGNDD+ ++I +Y K + D L+A
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCLEA 224
>gi|344199451|ref|YP_004783777.1| 30S ribosomal protein S2 [Acidithiobacillus ferrivorans SS3]
gi|343774895|gb|AEM47451.1| ribosomal protein S2 [Acidithiobacillus ferrivorans SS3]
Length = 250
Score = 260 bits (664), Expect = 3e-66, Method: Composition-based stats.
Identities = 129/251 (51%), Positives = 172/251 (68%), Gaps = 2/251 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S +++AGVHFGHQ+R+W+PKM+ Y+FG RN+IHIINLE TL M A+ ++ Q
Sbjct: 1 MSSNVTMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQ 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ G +LFVGTKRQAR + EA R+ F++QRWLGG LTNFKTI+ SI+RL E+D
Sbjct: 61 ISRKHGRVLFVGTKRQAREAVEQEARRSSAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQ 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G++ KL+KKE L R++ KL R +GGIK+MN +PDAIF+IDVG+ AV EA KL
Sbjct: 121 MAADGTMEKLTKKEVLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIM 406
IP+IGVVD+N P I+Y IPGNDD+ ++I LY + DA LD + GE S L +
Sbjct: 181 GIPVIGVVDSNCDPLLIDYPIPGNDDATRAIRLYASLVADAILDGRQGGE--SALLDEFV 238
Query: 407 ECKKALIEANG 417
E + IE +
Sbjct: 239 EVDEETIEIDA 249
>gi|256823127|ref|YP_003147090.1| 30S ribosomal protein S2 [Kangiella koreensis DSM 16069]
gi|256796666|gb|ACV27322.1| ribosomal protein S2 [Kangiella koreensis DSM 16069]
Length = 244
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 162/217 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGH+TRFWNP+M YIFG RNKIHIINLE+T+ M+ A+ Y+ ++ +KG +L
Sbjct: 9 MLQAGVHFGHKTRFWNPQMRPYIFGARNKIHIINLEETVPMFNDALNYLGKVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R+G F+D+RWLGG+LTN+KTI+ SI RLK+++ +G+ +
Sbjct: 69 FVGTKRAASEIVKEEATRSGQFFVDKRWLGGMLTNYKTIRGSINRLKDLEKQSEDGTFER 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL IGGIKNM +PD +F+ID + A++EA K+ IP++ VVD
Sbjct: 129 LTKKEALMRRREMEKLEASIGGIKNMGGLPDVLFVIDADHENIAIAEANKMGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +P G++Y+IPGNDD+ ++I LY + DA LD K
Sbjct: 189 TNSNPKGVDYIIPGNDDAIRAIRLYCAAVADAVLDGK 225
>gi|30249678|ref|NP_841748.1| uridylate kinase [Nitrosomonas europaea ATCC 19718]
gi|75540359|sp|Q82TZ7.1|PYRH_NITEU RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|30180715|emb|CAD85627.1| Aspartokinase superfamily [Nitrosomonas europaea ATCC 19718]
Length = 237
Score = 260 bits (664), Expect = 3e-66, Method: Composition-based stats.
Identities = 124/223 (55%), Positives = 170/223 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +++++I+ E++ ++ G+E+AIV+GGGNI RG+ + +DR TAD
Sbjct: 14 GEALMGDGHYGIDRAVVEHIVVEVAGVLQLGVEVAIVVGGGNIFRGMKSAGDGMDRVTAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT +N+LAL D + ++G++S V SA+ I++ +E Y+ A++YL+E KVV+FA G
Sbjct: 74 YMGMLATTMNALALHDAMRRNGVVSRVQSALRIDQVVEPYVRGKALRYLDERKVVVFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ A I+LKATKVDGIY SDP K A ++ +TFDE ISK L
Sbjct: 134 TGNPFFTTDTAAALRGMEMNANIVLKATKVDGIYTSDPLKNKDAQRFQSLTFDEAISKNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TA + CRDQKLPI VFSI K+GALKRVI G++EGT V+
Sbjct: 194 QVMDATALTLCRDQKLPINVFSIFKTGALKRVIMGEDEGTSVF 236
>gi|90022242|ref|YP_528069.1| 30S ribosomal protein S2 [Saccharophagus degradans 2-40]
gi|123395864|sp|Q21HH2.1|RS2_SACD2 RecName: Full=30S ribosomal protein S2
gi|89951842|gb|ABD81857.1| SSU ribosomal protein S2P [Saccharophagus degradans 2-40]
Length = 246
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 159/216 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ + QLG K +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNEALAIVKQLGSQKKKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ I +A R+ MPF+ RWLGG+LTN+KTI+ SI+R +E++ +G+ K
Sbjct: 69 FVGTKRAAQKSIKEQAERSNMPFVSHRWLGGMLTNYKTIRASIRRYRELETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL + IGGIK+M +PDA+FIIDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALVRTRIMEKLEKSIGGIKDMGGLPDALFIIDVEHERIAIQEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN P G++YVIPGNDD+ ++I LY + DA ++
Sbjct: 189 TNSDPAGVDYVIPGNDDAIRAIKLYATAVADACIEG 224
>gi|300114876|ref|YP_003761451.1| 30S ribosomal protein S2 [Nitrosococcus watsonii C-113]
gi|299540813|gb|ADJ29130.1| ribosomal protein S2 [Nitrosococcus watsonii C-113]
Length = 268
Score = 260 bits (664), Expect = 3e-66, Method: Composition-based stats.
Identities = 117/219 (53%), Positives = 165/219 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+WNPKM+ YIFG RN IHIINLE+TL +Y +A Y+ +L +KGT+
Sbjct: 8 QMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYIEATNYLGRLATNKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ + EA R GMP+++ RWLGG+LTNF+T++ SI+RL +++ I +GS+
Sbjct: 68 LFVGTKRAAQEAVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAMIQDGSLD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L K+EAL R + KL +GGIKNM +PDA+F+IDV + + AV EA+KL IP++ VV
Sbjct: 128 RLKKREALTVRRDRDKLESNLGGIKNMTHLPDALFVIDVEHERIAVDEAVKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN P +Y+IPGNDD+ ++I LY +GI D +D +T
Sbjct: 188 DTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDGRT 226
>gi|356960708|ref|ZP_09063690.1| 30S ribosomal protein S2, partial [gamma proteobacterium SCGC
AAA001-B15]
Length = 284
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+K+++AGVHFGH+ RFW+PKM +I+G RN +HIINLEKTL + + + + G+
Sbjct: 7 KKMLEAGVHFGHRARFWHPKMEPFIYGTRNGVHIINLEKTLPQFNDVLNFASKTAAHGGS 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKR A +I EA+R GMP+++ RWLGG++TN+KTIK SI+RLK+++ F+ +
Sbjct: 67 ILFVGTKRAASNIIKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLE-FLAEENF 125
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+ SKKEAL R+ KL R +GGIK++ IPD +F+ID+G+ + AV EA L +PIIGV
Sbjct: 126 SQYSKKEALAMTREMEKLERSLGGIKDLGGIPDVVFVIDIGHERNAVREARTLQLPIIGV 185
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
VD+NH+P+GI+YVI GNDDS ++I+ YT+ I +A L+AK
Sbjct: 186 VDSNHNPEGIDYVIAGNDDSIRAISYYTREIANAVLEAKA 225
>gi|83647917|ref|YP_436352.1| 30S ribosomal protein S2 [Hahella chejuensis KCTC 2396]
gi|123739861|sp|Q2SBP7.1|RS2_HAHCH RecName: Full=30S ribosomal protein S2
gi|83635960|gb|ABC31927.1| ribosomal protein S2 [Hahella chejuensis KCTC 2396]
Length = 253
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 159/214 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+R++ L K +L
Sbjct: 9 LLKAGVHFGHQTRFWNPKMRKYIFGARNKIHIINLEHTVPALNDALRFVSNLAEKKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA RA MP+++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAGKIIKEEADRANMPYVNHRWLGGMLTNYKTIRQSIRRYRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEVLMLNREMDKLERSIGGIKDMGGLPDALFVIDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFL 389
TN PDG++YVIPGNDD+ ++I +Y K + D+ L
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIQVYAKAVADSCL 222
>gi|374854465|dbj|BAL57346.1| 30S ribosomal protein S2 [uncultured gamma proteobacterium]
Length = 248
Score = 259 bits (663), Expect = 4e-66, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 165/218 (75%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ +I+G R+ IHIINLEKTL +A+ ++ Q ++G +
Sbjct: 8 ELLEAGVHFGHQTRYWNPKMAPFIYGVRSGIHIINLEKTLPYLREALHFLEQTAANRGVV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF GTK+ A+ + EAVR GMP+++ RWLGG LTNF+TI+ S++RLKE++ +G+++
Sbjct: 68 LFAGTKKTAQKAVQEEAVRCGMPYVNYRWLGGTLTNFRTIRQSVKRLKELETMRDDGTLQ 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ SK+EAL R+ KL R +GGIK+M +PDA+F++DVG+ AV EA KL IPI+GVV
Sbjct: 128 RFSKREALELMRELEKLERSLGGIKDMEELPDALFVLDVGHEYIAVREAQKLGIPIVGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SPDGI+Y IPGNDDS ++I LY + A L+ K
Sbjct: 188 DTNNSPDGIDYPIPGNDDSIRAIQLYCRAAATAILEGK 225
>gi|399154436|ref|ZP_10754503.1| 30S ribosomal protein S2 [gamma proteobacterium SCGC AAA007-O20]
Length = 343
Score = 259 bits (663), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 164/220 (74%), Gaps = 1/220 (0%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+K+++AGVHFGH+ RFW+PKM +I+G RN +HIINLEKTL + + + + G+
Sbjct: 7 KKMLEAGVHFGHRARFWHPKMEPFIYGTRNGVHIINLEKTLPQFNDVLNFASKTASQGGS 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKR A +I EA+R GMP+++ RWLGG++TN+KTIK SI+RLK+++ F+ S
Sbjct: 67 ILFVGTKRAASNIIKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLE-FLAEESF 125
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+ SKKEAL R+ KL R +GGIK++ IPD IF++D+G+ + AV EA L +PIIGV
Sbjct: 126 AQYSKKEALAMTREMEKLERSLGGIKDLGGIPDVIFVVDIGHERNAVREAHTLQLPIIGV 185
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
VD+NH+P+GI+Y+I GNDDS ++I+ YT+ I +A L+AK
Sbjct: 186 VDSNHNPEGIDYMIAGNDDSIRAISYYTREIANAVLEAKA 225
>gi|254513843|ref|ZP_05125904.1| ribosomal protein S2 [gamma proteobacterium NOR5-3]
gi|219676086|gb|EED32451.1| ribosomal protein S2 [gamma proteobacterium NOR5-3]
Length = 264
Score = 259 bits (663), Expect = 5e-66, Method: Composition-based stats.
Identities = 118/217 (54%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ + +L SK ++
Sbjct: 9 LLQAGAHFGHQTRYWNPKMGQYIFGDRNKIHIINLEYTVPAFNEALDMVKRLAASKNKIM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ +A RAGMP++ RWLGG+LTN+KTI+ SI+RL+E++ ++G+
Sbjct: 69 FVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQQSDGTFAA 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN PDG++YVIPGNDD+ ++I LY + DA + K
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAGK 225
>gi|88706583|ref|ZP_01104286.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71]
gi|88699079|gb|EAQ96195.1| 30S ribosomal protein S2 [Congregibacter litoralis KT71]
Length = 265
Score = 259 bits (663), Expect = 5e-66, Method: Composition-based stats.
Identities = 118/217 (54%), Positives = 163/217 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ + +L SK +L
Sbjct: 4 LLQAGAHFGHQTRYWNPKMDQYIFGDRNKIHIINLEYTVPAFNEALDMVKRLSGSKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ +A RAGMP++ RWLGG+LTN+KTI+ SI+RL+E++ ++G+
Sbjct: 64 FVGTKRAAGKIMKEQAERAGMPYVSHRWLGGMLTNYKTIRASIKRLRELEAQQSDGTFAA 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL R IGGIK+M +PDA+F++DV + + A++EA KL IP+IGVVD
Sbjct: 124 LTKKEALMRARQMEKLERSIGGIKDMGGLPDALFVVDVDHERIAITEANKLGIPVIGVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN PDG++YVIPGNDD+ ++I LY + DA + K
Sbjct: 184 TNSDPDGVDYVIPGNDDAIRAIKLYVTAVADACIAGK 220
>gi|71064926|ref|YP_263653.1| 30S ribosomal protein S2 [Psychrobacter arcticus 273-4]
gi|93005219|ref|YP_579656.1| 30S ribosomal protein S2 [Psychrobacter cryohalolentis K5]
gi|122989950|sp|Q1QDT1.1|RS2_PSYCK RecName: Full=30S ribosomal protein S2
gi|123748153|sp|Q4FUT9.1|RS2_PSYA2 RecName: Full=30S ribosomal protein S2
gi|71037911|gb|AAZ18219.1| SSU ribosomal protein S2P [Psychrobacter arcticus 273-4]
gi|92392897|gb|ABE74172.1| SSU ribosomal protein S2P [Psychrobacter cryohalolentis K5]
Length = 264
Score = 258 bits (660), Expect = 9e-66, Method: Composition-based stats.
Identities = 118/224 (52%), Positives = 161/224 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ + +A+ Y+ L K +L
Sbjct: 14 LLQAGAHFGHQTRFWNPKMGPYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKKNKVL 73
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A GVIA +A RAGMP++D RWLGG+LTN+KT++ SI RLKE++ +G+ K
Sbjct: 74 FVGTKRAASGVIAEQAARAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDGTFAK 133
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R KL R +GGIK+M +PDAIF++DV + A+ EA L IP+IG+VD
Sbjct: 134 LTKREALERTRDMEKLERSLGGIKDMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVIGIVD 193
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
TN +PD ++Y+IP NDD+ +++ LY + DA + K + ++
Sbjct: 194 TNSNPDNVDYIIPANDDAIRAVTLYVTSMADAIIAGKEYAQTQA 237
>gi|303258057|ref|ZP_07344065.1| UMP kinase [Burkholderiales bacterium 1_1_47]
gi|302859076|gb|EFL82159.1| UMP kinase [Burkholderiales bacterium 1_1_47]
Length = 241
Score = 258 bits (660), Expect = 9e-66, Method: Composition-based stats.
Identities = 122/223 (54%), Positives = 172/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM +A+ I+ +K+I+ EI E+V G++LAIV+GGGNI RG++ +DR+T D
Sbjct: 18 GEALMGDNAFGISRDTLKSIVGEIKEVVDLGVQLAIVVGGGNIFRGVALGSTGMDRATGD 77
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT +N++AL D L +G+ + V A+ I++ E YI A+ +L++G+VVIFA G
Sbjct: 78 YMGMLATCMNAMALQDALRNAGVEARVQCALDIDQVAEPYIRGKALSHLKKGRVVIFAAG 137
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR+AEI A+++LKAT+VDG++ +DP K +A +YK +TFDE I KKL
Sbjct: 138 TGNPFFTTDTAAALRSAEIGADMVLKATQVDGVFTADPKKDPNAKMYKSLTFDEAIQKKL 197
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+D+TAF+ CRDQ +PIRVF++ K GALKRV+ G++EGTLV+
Sbjct: 198 KILDATAFTLCRDQGMPIRVFNLHKPGALKRVVLGEDEGTLVH 240
>gi|319786515|ref|YP_004145990.1| 30S ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1]
gi|317465027|gb|ADV26759.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1]
Length = 271
Score = 258 bits (659), Expect = 1e-65, Method: Composition-based stats.
Identities = 114/218 (52%), Positives = 161/218 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM YIFG R KIHIINLEKT+ +++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMGPYIFGARGKIHIINLEKTVPLFQDAMNFISGIAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R GMP++ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDAMKEEAERCGMPYMTQRWLGGTLTNFRTVKQSVSRLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK+MN +PDA+F+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLGLRRERDKLEASLGGIKDMNRLPDALFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|90415793|ref|ZP_01223726.1| 30S ribosomal protein S2 [gamma proteobacterium HTCC2207]
gi|90332167|gb|EAS47364.1| 30S ribosomal protein S2 [gamma proteobacterium HTCC2207]
Length = 265
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 161/218 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTRFWNPKMS +IFG RNK+H+INLE+T+ + +A+ + + +L
Sbjct: 4 MLQAGVHFGHQTRFWNPKMSKFIFGSRNKVHVINLEQTVPAFNEALEVLRKEAAKGNQIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ ++ EA R GMP++ RWLGG+LTN+KTI+ SI+R ++++ NG+ +
Sbjct: 64 FVGTKRAAQKILKEEAERCGMPYVSHRWLGGMLTNYKTIRASIRRFRDLETQEANGTFER 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R + KL IGGIK+MN +PD +F+IDV + + A++EA KL IP++G+VD
Sbjct: 124 LTKKEVLMRTRMKEKLENSIGGIKDMNGLPDILFVIDVDHERIAINEANKLGIPVVGIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN +PDG++YVIPGNDDS ++I LY I + L+ K
Sbjct: 184 TNSNPDGVDYVIPGNDDSIRAIKLYAASIANTVLEGKA 221
>gi|77164326|ref|YP_342851.1| 30S ribosomal protein S2 [Nitrosococcus oceani ATCC 19707]
gi|254434810|ref|ZP_05048318.1| ribosomal protein S2 [Nitrosococcus oceani AFC27]
gi|123594763|sp|Q3JCX5.1|RS2_NITOC RecName: Full=30S ribosomal protein S2
gi|76882640|gb|ABA57321.1| SSU ribosomal protein S2P [Nitrosococcus oceani ATCC 19707]
gi|207091143|gb|EDZ68414.1| ribosomal protein S2 [Nitrosococcus oceani AFC27]
Length = 269
Score = 258 bits (659), Expect = 1e-65, Method: Composition-based stats.
Identities = 117/219 (53%), Positives = 164/219 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+WNPKM+ YIFG RN IHIINLE+TL +Y +A Y+ +L +KGT+
Sbjct: 8 QMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYMEATNYLGRLAANKGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ + EA R GMP+++ RWLGG+LTNF+T++ SI+RL +++ I +GS+
Sbjct: 68 LFVGTKRAAQEPVREEAGRCGMPYVNSRWLGGMLTNFQTVRRSIKRLHDLEAMIQDGSLD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L K+EAL R + KL +GGIKNM +PDA+F+IDV + + AV EA KL IP++ VV
Sbjct: 128 RLKKREALTVRRDRDKLENNLGGIKNMTHLPDALFVIDVEHERIAVDEAAKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN P +Y+IPGNDD+ ++I LY +GI D +D +T
Sbjct: 188 DTNSDPRKADYIIPGNDDAIRAIRLYLRGIADGIIDGRT 226
>gi|333368131|ref|ZP_08460346.1| 30S ribosomal protein S2 [Psychrobacter sp. 1501(2011)]
gi|332977790|gb|EGK14548.1| 30S ribosomal protein S2 [Psychrobacter sp. 1501(2011)]
Length = 263
Score = 258 bits (659), Expect = 1e-65, Method: Composition-based stats.
Identities = 118/221 (53%), Positives = 159/221 (71%)
Query: 172 PAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSK 231
P ++QAG HFGHQTRFWNPKM+ YIFG RNKIHIINLE T+ + +A+ Y+ L
Sbjct: 9 PMRDLLQAGAHFGHQTRFWNPKMNQYIFGARNKIHIINLEHTVKAFNEALTYVNGLAAKN 68
Query: 232 GTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNG 291
+LFVGTKR A GVI +A+RAGMP++D RWLGG+LTN+KT++ SI RLKE++ +G
Sbjct: 69 NKVLFVGTKRAASGVIREQALRAGMPYVDHRWLGGMLTNWKTLRQSINRLKELEKQAEDG 128
Query: 292 SIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPII 351
+ KL+K+EAL R KL R +GGIKNM +PDAIF++DV + A+ EA L IP+I
Sbjct: 129 TFAKLTKREALERTRAMEKLERSLGGIKNMGGLPDAIFVVDVDHEAIAIKEAKNLGIPVI 188
Query: 352 GVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
G+VDTN +PD ++Y+IP NDD+ +++ LY + DA + K
Sbjct: 189 GIVDTNSNPDNVDYIIPANDDAIRAVTLYVTRMADAIIAGK 229
>gi|348617577|ref|ZP_08884114.1| stringent starvation protein A [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347817054|emb|CCD28721.1| stringent starvation protein A [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 175
Score = 258 bits (659), Expect = 1e-65, Method: Composition-based stats.
Identities = 121/178 (67%), Positives = 149/178 (83%), Gaps = 4/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+DLFNKP++I MNPYGQVP+LVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 1 MDFEIRDVDLFNKPEDIAMMNPYGQVPVLVERDLILYESNIINEYIDERFPHPQLMPADP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ R R RL L NFE+ IF+H++ LE ++ K + +AR IR+ LI LAP+F KN+YM
Sbjct: 61 VQRGRVRLFLHNFEQGIFVHVHTLEKDKAKAA----DKARTAIREHLIQLAPIFTKNRYM 116
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAP+LWRLD +GI L A+PL+KYAERIFSRP+Y+E+LTP+EK+M+
Sbjct: 117 LGDEFSMLDVAIAPVLWRLDCFGIQLPNHAAPLMKYAERIFSRPAYIEALTPSEKVMR 174
>gi|384083334|ref|ZP_09994509.1| 30S ribosomal protein S2 [gamma proteobacterium HIMB30]
Length = 342
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 169/223 (75%), Gaps = 2/223 (0%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKM+ +IFG RNKIHII+LE T+ +KA+ + + +K +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMAPFIFGARNKIHIIDLELTVPALDKAVAIVRGMAQNKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ +A RAG PF++ RWLGG+LTN+KTI+ SI+RL+E++ + +G++ K
Sbjct: 69 FVGTKRAAAKIVKEQAERAGQPFVNHRWLGGMLTNWKTIRQSIKRLRELEAKMGDGTLEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
+SKKEAL R+ KL+R IGGIK+M +PDAIF++DV + A+ EA KL IP+IG+VD
Sbjct: 129 ISKKEALDLSRQLEKLDRSIGGIKDMGGLPDAIFVVDVNHENIAIQEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLD--AKTVGE 396
TN PDG++ VIPGNDD+ ++I LY+ I DA ++ A+++G+
Sbjct: 189 TNSDPDGVDIVIPGNDDAIRAIELYSSAIADACIEGAAESLGK 231
>gi|257454315|ref|ZP_05619579.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60]
gi|257448286|gb|EEV23265.1| ribosomal protein S2 [Enhydrobacter aerosaccus SK60]
Length = 256
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 167 MESLTPAE----KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIR 222
M S P + +++AG HFGHQTRFWNPKM +IFG RNKIHIINLE T+ +A+
Sbjct: 1 MASANPTQVSMRDLLEAGAHFGHQTRFWNPKMGKFIFGARNKIHIINLEHTVKAMNEALN 60
Query: 223 YIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLK 282
++ + +LFVGTKR A VI+ +A RAGMP++D RWLGG+LTN+KTI+ SI RLK
Sbjct: 61 FVNREAARGNKVLFVGTKRAASNVISEQAARAGMPYVDHRWLGGMLTNWKTIRQSITRLK 120
Query: 283 EMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSE 342
E + +G+ KL+K+EAL R+ KL R +GGIKNMN +PDAIF++DV + A+ E
Sbjct: 121 EYEKQAEDGTFAKLTKREALERTREMEKLERALGGIKNMNGLPDAIFVVDVDHEAIAIKE 180
Query: 343 AIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
A L IP+IG+VDTN +PD ++YVIP NDD+ +++ LY + DA + K
Sbjct: 181 AKNLGIPVIGIVDTNSNPDDVDYVIPANDDAIRAVTLYVSAVADAIIAGK 230
>gi|329893770|ref|ZP_08269858.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088]
gi|328923493|gb|EGG30807.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC3088]
Length = 249
Score = 258 bits (658), Expect = 2e-65, Method: Composition-based stats.
Identities = 120/219 (54%), Positives = 163/219 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAG HFGHQTR+WNPKM YIFG RNKIHIINLE T+ A+ + +L +K +
Sbjct: 8 ELLQAGAHFGHQTRYWNPKMGRYIFGARNKIHIINLEHTVPALNDALAMVERLASNKNKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A VI +A RAGMP + RWLGG+LTN+KTI+ SI+RL++++ +G+
Sbjct: 68 LFVGTKRAAGKVIKEQAERAGMPCVSHRWLGGMLTNYKTIRASIKRLRDLEAQQADGTFA 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R+ KL R IGGIK+M +PDA+F+IDV + + A++EA KL IP+IG+V
Sbjct: 128 KLTKKEALMRTRQMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN PDG++YVIPGNDD+ +++ LY + I DA + KT
Sbjct: 188 DTNSDPDGVDYVIPGNDDAIRAVKLYAQAIADACIAGKT 226
>gi|119477102|ref|ZP_01617338.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143]
gi|119449465|gb|EAW30703.1| 30S ribosomal protein S2 [marine gamma proteobacterium HTCC2143]
Length = 257
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 158/219 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ I +L K +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNEALAVIQKLSVGKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A ++ EA R+ P++ RWLGG+LTN+KTI+ SI+RL++++ +G+ K
Sbjct: 64 FVGTKRAASKIMREEADRSSQPYVSHRWLGGMLTNYKTIRGSIKRLRDLEAQQADGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R IGGIK+M +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 124 LTKKEALMRTRAMEKLERSIGGIKDMGGLPDALFVIDVDQERIAIKEANSLGIPVIGIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN PDG++YVIPGNDD+ ++I LY+ + DA L K
Sbjct: 184 TNSDPDGVDYVIPGNDDAIRAIKLYSAAVADAVLAGKAA 222
>gi|254492638|ref|ZP_05105809.1| ribosomal protein S2 [Methylophaga thiooxidans DMS010]
gi|224462159|gb|EEF78437.1| ribosomal protein S2 [Methylophaga thiooxydans DMS010]
Length = 245
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 159/219 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM +IFG RN IHIINLE++L ++ A+ ++ +L KG +
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMGQFIFGKRNNIHIINLEQSLPLFNDALNFVSKLASQKGRI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ I +A RAGMP++++RWLGG+LTN++T++ SI+RL + + +G
Sbjct: 63 LFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNYQTVRQSIKRLDAIQEMMESGKTE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE L R+Q KL + IGGI+ M +PDA+F+IDV + AV EA KL IP+I VV
Sbjct: 123 GLKKKEILDLTREQDKLEKSIGGIRKMGGLPDAMFVIDVEHESIAVKEARKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+N PDG++YVIPGNDDS ++I LYT DA L+ +
Sbjct: 183 DSNSDPDGVDYVIPGNDDSMRAIRLYTANFADAILEGRA 221
>gi|380513316|ref|ZP_09856723.1| 30S ribosomal protein S2 [Xanthomonas sacchari NCPPB 4393]
Length = 265
Score = 257 bits (657), Expect = 2e-65, Method: Composition-based stats.
Identities = 125/254 (49%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R G PF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK M +PDA+F+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLTLRRERDKLEASLGGIKEMTRLPDALFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK----TVGELRSKTLAPIMECKK 410
DTN++PD ++Y IPGNDD+ +++ LY + DA L+ K +R + A + K
Sbjct: 188 DTNYNPDLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNAASVREEEFAEGGDDKG 247
Query: 411 ALIEANGKLSKAEE 424
NGK KAEE
Sbjct: 248 RGPRKNGK--KAEE 259
>gi|384084925|ref|ZP_09996100.1| 30S ribosomal protein S2 [Acidithiobacillus thiooxidans ATCC 19377]
Length = 250
Score = 257 bits (657), Expect = 2e-65, Method: Composition-based stats.
Identities = 124/229 (54%), Positives = 160/229 (69%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S +++AGVHFGHQ R+W+PKM+ Y+FG RN+IHIINLE TL M A+ +I Q
Sbjct: 1 MSSNVSMRALLEAGVHFGHQARYWHPKMAPYLFGERNRIHIINLEHTLPMLRSALAFIEQ 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ G +LFVGTKRQAR + EA R G F++QRWLGG LTNFKTI+ SI+RL E+D
Sbjct: 61 VSRKHGRVLFVGTKRQAREAVEQEARRCGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQ 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G++ KL+KKE L R++ KL R +GGIK MN +PDAIF+IDVG+ AV EA KL
Sbjct: 121 MTADGTLEKLTKKEGLTLSRERDKLERSLGGIKEMNGLPDAIFVIDVGHENIAVLEARKL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
IP+IGVVD+N P I+Y IPGNDD+ ++I LY + DA L + G
Sbjct: 181 GIPVIGVVDSNCDPLLIDYPIPGNDDATRAIRLYASLVADAILAGRQGG 229
>gi|392955010|ref|ZP_10320561.1| SSU ribosomal protein S2P [Hydrocarboniphaga effusa AP103]
gi|391857667|gb|EIT68198.1| SSU ribosomal protein S2P [Hydrocarboniphaga effusa AP103]
Length = 269
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/230 (53%), Positives = 170/230 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGH+TR+WNPKM SYIFG RNKIHIINLE TL M + A Y+ ++ + G +
Sbjct: 8 QLLEAGVHFGHRTRYWNPKMESYIFGSRNKIHIINLEHTLPMLKDACNYVGKIAANGGRV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR + EA RAGMPF+ QRWLGG LTNFKT+K SI+RL EM+ + +G++
Sbjct: 68 LFVGTKRAAREAVEAEAARAGMPFVSQRWLGGTLTNFKTVKGSIKRLHEMEKQVEDGTVN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKE L+F R+ KL + +GGIKN+ +PD +FI+D GY K AV+EA KL IP++ +V
Sbjct: 128 RLSKKEQLMFSRELEKLRKSLGGIKNLPTLPDCLFIVDTGYEKIAVAEARKLGIPVVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAP 404
D+N+ P GI+ VIPGNDD+ ++I +Y + + DA ++A+ + + P
Sbjct: 188 DSNNDPQGIDVVIPGNDDATRAIKVYAQCVADAIIEARASSSVPFREAPP 237
>gi|406898953|gb|EKD42365.1| hypothetical protein ACD_73C00189G0003 [uncultured bacterium]
Length = 238
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 169/222 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GE+LM D Y I+ + +++ EI ++ G+E+AIVIGGGNI RG++ + +DR+T+D
Sbjct: 14 GESLMGPDGYGIDLDMAQSVSQEIKAVIDLGVEVAIVIGGGNIYRGLAGSDKGVDRATSD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLATI+N++AL D L K+G+ + V+SAI + + +E YI A+++LE+G+VVIFA G
Sbjct: 74 YMGMLATIMNAMALQDTLEKNGVFTRVLSAIEMHQLVEPYIRRRAVRHLEKGRVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALRA EIKAE+ILKATKVDGIY+ DPNK AI ++K+TF +V+++ L
Sbjct: 134 TGNPFFTTDTAAALRAMEIKAEVILKATKVDGIYDRDPNKEAGAIRFEKLTFLDVLNRGL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MDST+ S C D LPI VF + K G +K+V+ G+N GTLV
Sbjct: 194 KVMDSTSISLCMDHGLPIIVFDLFKKGNVKKVVLGENIGTLV 235
>gi|358637389|dbj|BAL24686.1| uridylate kinase [Azoarcus sp. KH32C]
Length = 238
Score = 256 bits (655), Expect = 4e-65, Method: Composition-based stats.
Identities = 130/223 (58%), Positives = 174/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN ++ I++EI+E+ S G+++ +VIGGGNI RG+ +DR+TAD
Sbjct: 15 GEALMGDDAYGINEDVVGRIVAEIAEVKSLGVQVGVVIGGGNIFRGMKGAASGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D L ++G+ + V SA+ I++ +E YI AI++LEEG+VVIFA G
Sbjct: 75 YMGMLATVMNAMALADALRRAGVEARVQSALRIDQVVEPYIRGRAIRHLEEGRVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ A+I+LKATKVDG+Y +DP K A Y +I+FDE I + L
Sbjct: 135 TGNPFFTTDTAAALRGSEMAAQIVLKATKVDGVYTADPKKDPDAKRYHRISFDEAIGRNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
E+MD+TAF+ CRDQKLPI VFSI KSGALKRV+ G++EGTLV+
Sbjct: 195 EVMDTTAFALCRDQKLPINVFSIFKSGALKRVVLGQDEGTLVH 237
>gi|285018791|ref|YP_003376502.1| 30S ribosomal protein S2 [Xanthomonas albilineans GPE PC73]
gi|283474009|emb|CBA16510.1| probable 30s ribosomal protein s2 [Xanthomonas albilineans GPE
PC73]
Length = 265
Score = 256 bits (655), Expect = 4e-65, Method: Composition-based stats.
Identities = 124/254 (48%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+PKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSIAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R G PF+ QRWLGG LTNF+TIK S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTIKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK MN +PDA+F+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLTMRRERDKLEASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT----VGELRSKTLAPIMECKK 410
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K +R + A + K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPHAASVREEEFAEASDDKG 247
Query: 411 ALIEANGKLSKAEE 424
NGK KAEE
Sbjct: 248 RSPRKNGK--KAEE 259
>gi|148245100|ref|YP_001219794.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA]
gi|146326927|dbj|BAF62070.1| 30S ribosomal protein S2 [Candidatus Vesicomyosocius okutanii HA]
Length = 261
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T +K+++ GVHFGH+ RFW+PKM +I+G RN IHIINLEKTL M+ + +I + +
Sbjct: 4 TSMKKMLETGVHFGHRARFWHPKMKRFIYGTRNGIHIINLEKTLPMFNDVLNFINKTVKA 63
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
++LFVGTKR A +I EA+R GMP+++ RWLGG++TN+KTIK SI+RLK+++ F+
Sbjct: 64 GRSILFVGTKRAASNIIKQEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLE-FLAE 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
+ + KKEAL+ R+ KL R +GGIK++ IPD +F+ID G K AV+EA KL++PI
Sbjct: 123 ENFNQFGKKEALIMKREMKKLERSLGGIKDLGSIPDVVFVIDTGIEKNAVAEAKKLHLPI 182
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
IG+VDTNH+P+GI+YVIPGNDDS ++I Y + I + L+ K
Sbjct: 183 IGIVDTNHNPEGIDYVIPGNDDSIRAIGFYAREIANTILETKAT 226
>gi|254482811|ref|ZP_05096048.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148]
gi|214036892|gb|EEB77562.1| ribosomal protein S2 [marine gamma proteobacterium HTCC2148]
Length = 287
Score = 256 bits (654), Expect = 4e-65, Method: Composition-based stats.
Identities = 116/217 (53%), Positives = 162/217 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTR+WNPKM YIFG RNKIHIINLE T+ + +A+ + +L +K +L
Sbjct: 4 LLQAGAHFGHQTRYWNPKMDQYIFGARNKIHIINLEHTVPAFNEALDMVTRLAGNKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A R+GMP++ RWLGG+LTN+KTI+ SI+R ++++ +G+ +
Sbjct: 64 FVGTKRAAGKIIKEQAERSGMPYVSHRWLGGMLTNYKTIRASIKRYRDLEAQAADGTFER 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL R IGGIK+M +PDA+F+IDV + + A++EA KL IP+IGVVD
Sbjct: 124 LTKKEALMRTRDMEKLERSIGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ ++I LY + DA + K
Sbjct: 184 TNSNPDGVDYVIPGNDDAIRAIKLYVAAVADACMAGK 220
>gi|323143560|ref|ZP_08078237.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066]
gi|322416623|gb|EFY07280.1| ribosomal protein S2 [Succinatimonas hippei YIT 12066]
Length = 254
Score = 256 bits (654), Expect = 5e-65, Method: Composition-based stats.
Identities = 119/217 (54%), Positives = 159/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM SYIFGHRN +HIINLEKT+ YE A+ ++ + KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKSYIFGHRNGVHIINLEKTVQCYEDALNFLSSVVAHKGKVL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A G ++D RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 64 FVGTKRAACDQIGPAATSCGQFYVDHRWLGGMLTNWKTVRQSIKRLKELEIQSTDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEALL R+ KLNR +GGIK+M +PDA+F+ID A+ EA L IP++ VVD
Sbjct: 124 LTKKEALLRTRELAKLNRSLGGIKDMGGLPDALFVIDAEVEHIAIKEANNLGIPVVAVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN PDG+NYVIPGNDD+ +++ LY KG V+ A+
Sbjct: 184 TNSDPDGVNYVIPGNDDAIRAVELYLKGAVEVINAAR 220
>gi|331005979|ref|ZP_08329324.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989]
gi|330420224|gb|EGG94545.1| SSU ribosomal protein S2p (SAe) [gamma proteobacterium IMCC1989]
Length = 251
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 168/248 (67%), Gaps = 8/248 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM YIFG RN IHIINLE T+ + +A+ I ++G K +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMDQYIFGARNNIHIINLEHTVPAFNEALDMIKKMGSQKKKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
VGTKR A+ I +A RAG PF+ RWLGG+LTN+KTI+TSI+R +E + +G+ K
Sbjct: 69 MVGTKRAAQKTIKEQAERAGQPFVSHRWLGGMLTNYKTIRTSIRRFREFETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL IGGIK+M +PDA+F++DV + + A++EA KL IP+ G+VD
Sbjct: 129 LTKKEALMRTRAMEKLELSIGGIKDMGGLPDALFVVDVEHERIAINEANKLGIPVFGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +P G++YVIPGNDD+ ++I LY + DA +D L S P K +E
Sbjct: 189 TNSNPAGVDYVIPGNDDAIRAIKLYVTAVADACVDG-----LASSQEVP---NKDEFVEV 240
Query: 416 NGKLSKAE 423
+ ++AE
Sbjct: 241 DAPAAEAE 248
>gi|385330907|ref|YP_005884858.1| 30S ribosomal protein S2 [Marinobacter adhaerens HP15]
gi|311694056|gb|ADP96929.1| 30S ribosomal protein S2 [Marinobacter adhaerens HP15]
Length = 245
Score = 256 bits (653), Expect = 6e-65, Method: Composition-based stats.
Identities = 117/216 (54%), Positives = 163/216 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS +IFG RNKIHIINLE+T+ A++++ QL +K +L
Sbjct: 4 LLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALKFVQQLAENKNKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA RAG PF++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 64 FVGTKRAAAKIIKEEAERAGQPFVNHRWLGGMLTNYKTIRQSIRRYRDLETQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ +L R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 124 LTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLGIPVIGVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN PDG++YVIPGNDD+ ++I +Y K + D ++A
Sbjct: 184 TNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCMEA 219
>gi|330998731|ref|ZP_08322460.1| UMP kinase [Parasutterella excrementihominis YIT 11859]
gi|329576470|gb|EGG57982.1| UMP kinase [Parasutterella excrementihominis YIT 11859]
Length = 241
Score = 256 bits (653), Expect = 6e-65, Method: Composition-based stats.
Identities = 121/223 (54%), Positives = 171/223 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM +A+ I+ +K+I+ EI E+V ++LAIV+GGGNI RG++ +DR+T D
Sbjct: 18 GEALMGDNAFGISRDTLKSIVGEIKEVVDLSVQLAIVVGGGNIFRGVALGSTGMDRATGD 77
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT +N++AL D L +G+ + V A+ I++ E YI A+ +L++G+VVIFA G
Sbjct: 78 YMGMLATCMNAMALQDALRNAGVEARVQCALDIDQVAEPYIRGKALSHLKKGRVVIFAAG 137
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR+AEI A+++LKAT+VDG++ +DP K +A +YK +TFDE I KKL
Sbjct: 138 TGNPFFTTDTAAALRSAEIGADMVLKATQVDGVFTADPKKDPNAKMYKSLTFDEAIQKKL 197
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+I+D+TAF+ CRDQ +PIRVF++ K GALKRV+ G++EGTLV+
Sbjct: 198 KILDATAFTLCRDQGMPIRVFNLHKPGALKRVVLGEDEGTLVH 240
>gi|114331999|ref|YP_748221.1| uridylate kinase [Nitrosomonas eutropha C91]
gi|122313297|sp|Q0AEH6.1|PYRH_NITEC RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|114309013|gb|ABI60256.1| uridylate kinase [Nitrosomonas eutropha C91]
Length = 237
Score = 256 bits (653), Expect = 6e-65, Method: Composition-based stats.
Identities = 126/222 (56%), Positives = 168/222 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ ++++ I+ EI+ ++ G+E+AIV+GGGNI RG+ + +DR TAD
Sbjct: 14 GEALMGDAQYGIDRTVVERIVVEIAGVLQLGVEVAIVVGGGNIFRGMKSAGDGMDRVTAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT +N+LAL D + ++G++S V SA+ I++ +E YI A++YL E KVVIFA G
Sbjct: 74 YMGMLATTMNALALHDAMRRNGVVSRVQSALRIDQVVEPYIRGKALRYLNERKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ A I+LKATKVDGIY SDP + A ++ +TFDE I+K L
Sbjct: 134 TGNPFFTTDTAAALRGMEMNANIVLKATKVDGIYTSDPFENKDAQRFRNLTFDEAINKNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQKLPI VFSI K+GALKRVI G++EGTLV
Sbjct: 194 QVMDATALTLCRDQKLPINVFSIFKTGALKRVIMGEDEGTLV 235
>gi|358448296|ref|ZP_09158800.1| 30S ribosomal protein S2 [Marinobacter manganoxydans MnI7-9]
gi|357227393|gb|EHJ05854.1| 30S ribosomal protein S2 [Marinobacter manganoxydans MnI7-9]
Length = 250
Score = 256 bits (653), Expect = 6e-65, Method: Composition-based stats.
Identities = 117/216 (54%), Positives = 163/216 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS +IFG RNKIHIINLE+T+ A++++ QL +K +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALKFVQQLAENKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA RAG PF++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAAKIIKEEAERAGQPFVNHRWLGGMLTNYKTIRQSIRRYRDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ +L R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN PDG++YVIPGNDD+ ++I +Y K + D ++A
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIQIYVKAVADTCMEA 224
>gi|385854141|ref|YP_005900655.1| 30S ribosomal protein S2 [Neisseria meningitidis H44/76]
gi|325201145|gb|ADY96600.1| ribosomal protein S2 [Neisseria meningitidis H44/76]
Length = 216
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 149/199 (74%)
Query: 194 MSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVR 253
M+ YIFG RNKIHI+NLEKTL M++ A + +L +KGT+LFVGTKRQAR +I EA R
Sbjct: 1 MAQYIFGARNKIHIVNLEKTLPMFQDAQEAVRRLVANKGTVLFVGTKRQARDIIREEATR 60
Query: 254 AGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNR 313
AGMPF+D RWLGG+LTN+KT+K SI+RL+E + N + SKKE L R KL R
Sbjct: 61 AGMPFVDYRWLGGMLTNYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLER 120
Query: 314 VIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDS 373
+GGIKNM +PDAIF+ID GY KG + EA KL IP+I VVDTN+SPDG+ YVIPGNDDS
Sbjct: 121 SLGGIKNMKGLPDAIFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDS 180
Query: 374 AKSIALYTKGIVDAFLDAK 392
AK+I LY +GI DA L+ K
Sbjct: 181 AKAIRLYCRGIADAVLEGK 199
>gi|84623524|ref|YP_450896.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|122879150|ref|YP_200616.6| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|384419974|ref|YP_005629334.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|123766594|sp|Q2P4A5.1|RS2_XANOM RecName: Full=30S ribosomal protein S2
gi|209574091|sp|Q5H1E0.2|RS2_XANOR RecName: Full=30S ribosomal protein S2
gi|84367464|dbj|BAE68622.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|353462887|gb|AEQ97166.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 267
Score = 255 bits (652), Expect = 8e-65, Method: Composition-based stats.
Identities = 115/218 (52%), Positives = 160/218 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+P M+ YIFG R KIHIINLEKT+ ++ A+ Y+ + +GT+
Sbjct: 8 QMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|357417898|ref|YP_004930918.1| 30S ribosomal protein S2 [Pseudoxanthomonas spadix BD-a59]
gi|355335476|gb|AER56877.1| 30S ribosomal protein S2 [Pseudoxanthomonas spadix BD-a59]
Length = 260
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 157/220 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKTL ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFVDAMNFISAIAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MP++ QRWLGG LTNF T+K S+ RLKE++ T+G+
Sbjct: 68 LFIGTKRSARDSIKEEAERCNMPYMTQRWLGGTLTNFATVKKSVARLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK MN +PDA+F+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLGLRRERDKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
D+N+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DSNYDPALVDYPIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|319778649|ref|YP_004129562.1| Stringent starvation protein A [Taylorella equigenitalis MCE9]
gi|397662412|ref|YP_006503112.1| stringent starvation protein (glutathione s-transferase)
[Taylorella equigenitalis ATCC 35865]
gi|317108673|gb|ADU91419.1| Stringent starvation protein A [Taylorella equigenitalis MCE9]
gi|394350591|gb|AFN36505.1| stringent starvation protein (glutathione s-transferase)
[Taylorella equigenitalis ATCC 35865]
gi|399115269|emb|CCG18068.1| stringent starvation protein (glutathione s-transferase)
[Taylorella equigenitalis 14/56]
Length = 203
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 146/178 (82%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDLFNKP+ I MNPYG +PILVERDL+LYESNIINEYIDERFP+PQLM +P
Sbjct: 25 MDFEIRDIDLFNKPEEIGSMNPYGTLPILVERDLVLYESNIINEYIDERFPHPQLMPGEP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFE+E+F + +LE+ S + + AR IRDRL ++ + KNKYM
Sbjct: 85 IMRARTRLFLFNFERELFSFVSVLEDRTKSNSDEELEVARSTIRDRLTQISQVMSKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI L K+A+P+ KYAERIFSRP+++E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAIAPLLWRLDHYGIELPKTAAPIQKYAERIFSRPAFIEALTPSEKVMR 202
>gi|188577162|ref|YP_001914091.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521614|gb|ACD59559.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 262
Score = 255 bits (651), Expect = 1e-64, Method: Composition-based stats.
Identities = 115/218 (52%), Positives = 160/218 (73%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+P M+ YIFG R KIHIINLEKT+ ++ A+ Y+ + +GT+
Sbjct: 3 QMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRGTI 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R GMPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 63 LFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 123 KLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 183 DTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGK 220
>gi|381198101|ref|ZP_09905440.1| 30S ribosomal protein S2 [Acinetobacter lwoffii WJ10621]
Length = 249
Score = 255 bits (651), Expect = 1e-64, Method: Composition-based stats.
Identities = 119/236 (50%), Positives = 163/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNSLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + E K+A
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKVEEAKEA 246
>gi|386287195|ref|ZP_10064370.1| 30S ribosomal protein S2 [gamma proteobacterium BDW918]
gi|385279727|gb|EIF43664.1| 30S ribosomal protein S2 [gamma proteobacterium BDW918]
Length = 249
Score = 255 bits (651), Expect = 1e-64, Method: Composition-based stats.
Identities = 117/217 (53%), Positives = 162/217 (74%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAGVHFGHQTR+WNPKM+ YIFG RNKIHIINLE T+ A+ I ++ +K +
Sbjct: 8 EMLQAGVHFGHQTRYWNPKMAPYIFGARNKIHIINLEHTVPAMNSALDAIAKMAANKNKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A +I +A RAGMPF+ RWLGG+LTN+KTI+ S++RL+E++ +G+
Sbjct: 68 LFVGTKRAASKIIGEQAARAGMPFVSHRWLGGMLTNYKTIRQSVRRLRELEAQQLDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R KL R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+ G+V
Sbjct: 128 KLTKKEALMRRRDMEKLERSIGGIKDMAGLPDALFVIDVDHERIAIQEANKLGIPVFGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN +PDG+++VIPGNDD+ ++I LY + D ++A
Sbjct: 188 DTNSNPDGVDFVIPGNDDAIRAIKLYVTAVADVAINA 224
>gi|262369542|ref|ZP_06062870.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046]
gi|262315610|gb|EEY96649.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046]
Length = 249
Score = 254 bits (650), Expect = 1e-64, Method: Composition-based stats.
Identities = 119/236 (50%), Positives = 163/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + E K+A
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKVEEAKEA 246
>gi|407893660|ref|ZP_11152690.1| 30S ribosomal protein S2 [Diplorickettsia massiliensis 20B]
Length = 294
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 168/226 (74%), Gaps = 1/226 (0%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
SL +++ +AG+HFGH+TRF PKMS YI+G RN I II+LE T +A+ Y+ +L
Sbjct: 29 SLVTLKELFEAGIHFGHRTRFREPKMSPYIYGVRNGISIIDLEITRKHLIEALDYVAKLA 88
Query: 229 FSKGT-LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLF 287
G+ ++FVGTKR A+ +I EA+R GMP+++ RWLGGLLTN++TI+ SI+RLKE++
Sbjct: 89 ARPGSKIMFVGTKRAAQDLIKAEAMRCGMPYVNHRWLGGLLTNYRTIRQSIKRLKELETR 148
Query: 288 ITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLN 347
+GS +L+KKEAL R+ KL R +GGIK+M+ +PDA+F+ID GY A++EA KL
Sbjct: 149 SQDGSFAQLTKKEALNLQRQMEKLERSLGGIKDMSGLPDALFVIDRGYENIAIAEAQKLK 208
Query: 348 IPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
IP+I +VDTNHSP+GI+Y+IPGNDD+A++I LYTK D L+A+
Sbjct: 209 IPVISIVDTNHSPEGIDYIIPGNDDAARAIVLYTKLFADTILEARA 254
>gi|437999712|ref|YP_007183445.1| RNA polymerase-associated protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812617|ref|YP_007449070.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429338946|gb|AFZ83368.1| RNA polymerase-associated protein [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778586|gb|AGF49466.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 203
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/178 (67%), Positives = 148/178 (83%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDID+ NKP+NI MNPYG VPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDIDINNKPENILTMNPYGNVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F + +LEN+ K AR +I+DRL L+P+ +NK++
Sbjct: 85 ITRARIRLFLYNFEKELFSQVKILENKNAKHDSNAIAEARIKIKDRLTQLSPILSRNKFL 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLD+ IAPLLWRL++Y I+LSK+A+PL KYAERIFSRP+Y+ESLTP+EKIM+
Sbjct: 145 LGDDFSMLDISIAPLLWRLEHYEISLSKNAAPLQKYAERIFSRPAYIESLTPSEKIMR 202
>gi|66769169|ref|YP_243931.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992317|ref|YP_001904327.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. B100]
gi|384427301|ref|YP_005636659.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. raphani 756C]
gi|81304871|sp|Q4USR2.1|RS2_XANC8 RecName: Full=30S ribosomal protein S2
gi|229559898|sp|B0RW65.1|RS2_XANCB RecName: Full=30S ribosomal protein S2
gi|66574501|gb|AAY49911.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734077|emb|CAP52283.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris]
gi|341936402|gb|AEL06541.1| ribosomal protein S2 [Xanthomonas campestris pv. raphani 756C]
Length = 275
Score = 254 bits (648), Expect = 2e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|289662909|ref|ZP_06484490.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289670220|ref|ZP_06491295.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 267
Score = 254 bits (648), Expect = 2e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|348590738|ref|YP_004875200.1| Stringent starvation protein A [Taylorella asinigenitalis MCE3]
gi|347974642|gb|AEP37177.1| Stringent starvation protein A [Taylorella asinigenitalis MCE3]
gi|399117067|emb|CCG19881.1| stringent starvation protein (glutathione s-transferase)
[Taylorella asinigenitalis 14/45]
Length = 203
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 149/178 (83%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE++DIDLFNKP++I MNPYG +PILVERDL+LYESNIINEYIDERFP+PQLM +P
Sbjct: 25 MDFEVKDIDLFNKPEDIALMNPYGTLPILVERDLVLYESNIINEYIDERFPHPQLMPGEP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRAR RL L NFE+E+F ++ +LE+ K + + K AR IRDRL ++ + KNKYM
Sbjct: 85 IMRARTRLFLFNFERELFSYVSILEDRSKKNNEEELKEARNIIRDRLTQISQVMSKNKYM 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV I+PLLWRLD+YGI L K+A+P+ KYAERIFSRP+++E+LTP+EK+M+
Sbjct: 145 LGDEFSMLDVAISPLLWRLDHYGIELPKAAAPIQKYAERIFSRPAFIEALTPSEKVMR 202
>gi|21242175|ref|NP_641757.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str.
306]
gi|294624549|ref|ZP_06703226.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666403|ref|ZP_06731649.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|390989415|ref|ZP_10259713.1| ribosomal protein S2 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418515720|ref|ZP_13081899.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418521725|ref|ZP_13087767.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|25009201|sp|Q8PMK5.1|RS2_XANAC RecName: Full=30S ribosomal protein S2
gi|21107592|gb|AAM36293.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str.
306]
gi|292601155|gb|EFF45215.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603845|gb|EFF47250.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|372555919|emb|CCF66688.1| ribosomal protein S2 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|410702260|gb|EKQ60769.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410707629|gb|EKQ66080.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 265
Score = 253 bits (647), Expect = 3e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|334130475|ref|ZP_08504272.1| Uridylate kinase/Uridine monophosphate kinase [Methyloversatilis
universalis FAM5]
gi|333444584|gb|EGK72533.1| Uridylate kinase/Uridine monophosphate kinase [Methyloversatilis
universalis FAM5]
Length = 237
Score = 253 bits (647), Expect = 3e-64, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 176/223 (78%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D Y I+ ++ I++EI+EI + G+E+ +VIGGGNI RG++ +DR+TAD
Sbjct: 14 GEALMGDDDYGISRDMLARIVAEIAEIRALGVEVGVVIGGGNIFRGVAGGAAGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + ++G+ + V SA+SIE +E YI +I+YLEEGKVVIFA G
Sbjct: 74 YMGMLATVMNALALGDAMRQAGVAARVQSALSIEPVVEFYIRGKSIRYLEEGKVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR EI+AE++LKATKVDG+Y++DP K SA Y +I+FDE IS+ L
Sbjct: 134 TGNPFFTTDTAAALRGREIEAEVVLKATKVDGVYSADPMKDKSATRYDRISFDEAISRDL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TA + CRDQ+LPI+VFSI K GALKRV+ G++EGTLV+
Sbjct: 194 KVMDATALALCRDQQLPIKVFSIFKPGALKRVVLGEDEGTLVH 236
>gi|78047035|ref|YP_363210.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|346724323|ref|YP_004850992.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citrumelo F1]
gi|123757529|sp|Q3BVK3.1|RS2_XANC5 RecName: Full=30S ribosomal protein S2
gi|78035465|emb|CAJ23110.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|346649070|gb|AEO41694.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citrumelo F1]
Length = 265
Score = 253 bits (646), Expect = 4e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|381171141|ref|ZP_09880290.1| ribosomal protein S2 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380688365|emb|CCG36777.1| ribosomal protein S2 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 260
Score = 253 bits (646), Expect = 4e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 63 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 123 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 183 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 220
>gi|217970578|ref|YP_002355812.1| uridylate kinase [Thauera sp. MZ1T]
gi|217507905|gb|ACK54916.1| uridylate kinase [Thauera sp. MZ1T]
Length = 237
Score = 253 bits (646), Expect = 4e-64, Method: Composition-based stats.
Identities = 129/223 (57%), Positives = 171/223 (76%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN ++ I+SE++EI G+++ +VIGGGNI RG+ +DR+TAD
Sbjct: 14 GEALMGDDAYGINEEVVSRIVSEVAEISRLGVQVGVVIGGGNIFRGMKGAASGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + + G+ + V SA+ I++ +E YI AI++LEEG+VVIFA G
Sbjct: 74 YMGMLATVMNAMALADAMRRMGLEARVQSALRIDQVVEPYIRGRAIRHLEEGRVVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AEI A+I+LKATKVDG+Y +DP K A Y +I+FDE I + L
Sbjct: 134 TGNPFFTTDTAAALRGAEIGAQIVLKATKVDGVYTADPKKDPQAQRYHRISFDEAIGRNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+++DSTAF+ CRDQKLPI VFSI K GALKRV+ G++EGTLV+
Sbjct: 194 QVLDSTAFALCRDQKLPINVFSIFKPGALKRVVMGEDEGTLVH 236
>gi|325929601|ref|ZP_08190715.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118]
gi|325540111|gb|EGD11739.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118]
Length = 260
Score = 253 bits (646), Expect = 4e-64, Method: Composition-based stats.
Identities = 116/218 (53%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 3 QMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 63 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 123 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 183 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 220
>gi|333908994|ref|YP_004482580.1| 30S ribosomal protein S2 [Marinomonas posidonica IVIA-Po-181]
gi|333479000|gb|AEF55661.1| ribosomal protein S2 [Marinomonas posidonica IVIA-Po-181]
Length = 244
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 165/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++Q G HFGHQTR+WNPKM +IFG RNKIHIINLE T+ +A+ + ++ +K +L
Sbjct: 9 LLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPAINEALELVKKMAENKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I +A RA MP+++ RWLGG+LTN+KTI+ SI+RL+E++ +T+G+ K
Sbjct: 69 FVGTKRAASKTIKEQAARASMPYVNHRWLGGMLTNYKTIRASIKRLRELESQMTDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PD +F+IDV + + A+ EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRELEKLELSMGGIKDMGGLPDVLFVIDVDHERIAIKEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PDG++Y+IP NDD+ +++ LY DA L+ ++ + + E +A
Sbjct: 189 TNSNPDGVDYIIPANDDAIRAVQLYVSAFADAVLEGRSATAGSADEFVEVNEAAEA 244
>gi|451936147|ref|YP_007460001.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777070|gb|AGF48045.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 179
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/178 (67%), Positives = 147/178 (82%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+D+ NK +NI MNPYG VPILVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 1 MDFEIRDVDINNKSENILTMNPYGNVPILVERDLILYESNIINEYIDERFPHPQLMPADP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F + +LE++ K AR +I+DRL LAP+ KNK++
Sbjct: 61 ITRARIRLFLHNFEKELFSQVKILESKSTKHENAAVTEARLKIKDRLTLLAPILAKNKFL 120
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLD+ IAPLLWRL++Y I+LSK+A+PL KYAERIFSRP+Y+ESLTP+EKIM+
Sbjct: 121 LGDDFSMLDISIAPLLWRLEHYEISLSKNAAPLQKYAERIFSRPAYIESLTPSEKIMR 178
>gi|381394696|ref|ZP_09920408.1| small subunit ribosomal protein S2 [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329663|dbj|GAB55541.1| small subunit ribosomal protein S2 [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 241
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM+ +IFG RNK+HIINLEKT+ ++ A+ ++ + KG +L
Sbjct: 9 MLNAGVHFGHQTRYWNPKMAQFIFGARNKVHIINLEKTVPLFNDALSFLQSVAHRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+R G ++++RWLGG+LTN+KT++ SI RLKE++ +G+ K
Sbjct: 69 FVGTKRAASDAVKESALRCGQYYVNKRWLGGMLTNWKTVRQSINRLKELEAQSADGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE LL R+ KL +GGIKNM +PD IF+ID + A++EA L IP++ +VD
Sbjct: 129 LTKKEVLLLNREMTKLESSLGGIKNMGGLPDVIFVIDADHEHIAITEARNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LYT + DA L+ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYTNAVADAVLEDR 225
>gi|21230832|ref|NP_636749.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|25009200|sp|Q8PAV2.1|RS2_XANCP RecName: Full=30S ribosomal protein S2
gi|21112436|gb|AAM40673.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length = 275
Score = 253 bits (645), Expect = 5e-64, Method: Composition-based stats.
Identities = 115/218 (52%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPK++ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 8 QMLEAGVHFGHQTRYWNPKLAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 128 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|149374437|ref|ZP_01892211.1| ribosomal protein S2 [Marinobacter algicola DG893]
gi|149361140|gb|EDM49590.1| ribosomal protein S2 [Marinobacter algicola DG893]
Length = 250
Score = 253 bits (645), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 162/216 (75%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTR+WNPKMS +IFG RNKIHIINLE+T+ A+ +++ L +K +L
Sbjct: 9 LLKAGAHFGHQTRYWNPKMSKFIFGARNKIHIINLEQTVPAMNDALNFVHNLAGNKNKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I EA+R+ P+++ RWLGG+LTN+KTI+ SI+R ++++ +G+ K
Sbjct: 69 FVGTKRAAAKIIKEEALRSNQPYVNHRWLGGMLTNYKTIRQSIRRYRDLEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ +L R IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALDRTREMDRLERSIGGIKDMGGLPDAMFVIDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
TN PDG++YVIPGNDD+ ++I +Y + + + ++A
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAIQIYVQAVAETCIEA 224
>gi|406040339|ref|ZP_11047694.1| 30S ribosomal protein S2 [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 249
Score = 252 bits (643), Expect = 8e-64, Method: Composition-based stats.
Identities = 119/236 (50%), Positives = 162/236 (68%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMDKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PD ++Y+IPGNDD+ +++ LY + DA L K + ++ A E K+A
Sbjct: 191 TNSNPDNVDYIIPGNDDAIRAVTLYASAMADAILAGKEYAQTQANAQAKGEEAKEA 246
>gi|410663629|ref|YP_006916000.1| 30S ribosomal protein S2 [Simiduia agarivorans SA1 = DSM 21679]
gi|409025986|gb|AFU98270.1| 30S ribosomal protein S2 [Simiduia agarivorans SA1 = DSM 21679]
Length = 248
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 158/217 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + A+ + + K +
Sbjct: 8 EMLQAGVHFGHQTRYWNPKMGKYIFGARNKIHIINLEHTVPAFNSALDALKTMASQKKKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A+ VI +A RAG PF+ RWLGG+LTN+KTI+ SI+RL+++++ +G+
Sbjct: 68 LFVGTKRAAQKVIKEQAQRAGQPFVSHRWLGGMLTNYKTIRQSIKRLRDLEIQSQDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R KL IGGIK+M +PDA+F+IDV + + A+ EA L IP+ G+V
Sbjct: 128 KLTKKEALMRTRLMAKLEDSIGGIKDMGGLPDALFVIDVDHERIAIQEANNLGIPVFGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN +P+G+++VIPGNDD+ ++I LY D+ L+
Sbjct: 188 DTNSNPEGVDFVIPGNDDAIRAIKLYVTAAADSCLEG 224
>gi|451811889|ref|YP_007448343.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451777791|gb|AGF48739.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 203
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 146/178 (82%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRD+D+ NK +NI MNPYG VPILVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIRDVDINNKSENILAMNPYGNVPILVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL L NFEKE+F + +LEN+ AR +I+DRL LAP+ KNK++
Sbjct: 85 ITRARIRLFLHNFEKELFSQVKILENKNTNHYNTAVTEARTKIKDRLTQLAPILAKNKFL 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLD+ IAPLLWRL++Y I+LSK+A+PL KYAERIFSRP+Y+ESLTP+EKIM+
Sbjct: 145 LGDDFSMLDISIAPLLWRLEHYEISLSKNAAPLQKYAERIFSRPAYIESLTPSEKIMR 202
>gi|430375853|ref|ZP_19430256.1| 30S ribosomal protein S2 [Moraxella macacae 0408225]
gi|429541084|gb|ELA09112.1| 30S ribosomal protein S2 [Moraxella macacae 0408225]
Length = 249
Score = 252 bits (643), Expect = 8e-64, Method: Composition-based stats.
Identities = 120/217 (55%), Positives = 155/217 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ +A+ Y + +L
Sbjct: 12 LLEAGAHFGHQTRFWNPKMGKYIFGARNKIHIINLEHTVTALNEALAYANREASRGNKIL 71
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI+ +A+RAGMP++D RWLGG+LTN+KTI+ SI RLKE + +G+ K
Sbjct: 72 FVGTKRAASQVISEQAIRAGMPYVDHRWLGGMLTNWKTIRQSITRLKEYERQAEDGTFAK 131
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GGIKNMN +PDAIF++ V + A+ EA L IP+IGVVD
Sbjct: 132 LTKREALERTREMEKLERALGGIKNMNGLPDAIFVVGVDHEAIAIQEAKNLGIPVIGVVD 191
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN SPD ++YVIP NDD+ ++I LY + DA L K
Sbjct: 192 TNASPDDVDYVIPANDDAIRAITLYVTAMADAILAGK 228
>gi|119898198|ref|YP_933411.1| uridylate kinase [Azoarcus sp. BH72]
gi|171704438|sp|A1K6R9.1|PYRH_AZOSB RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|119670611|emb|CAL94524.1| uridylate kinase [Azoarcus sp. BH72]
Length = 238
Score = 251 bits (642), Expect = 1e-63, Method: Composition-based stats.
Identities = 127/223 (56%), Positives = 172/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM DAY IN ++ I+SEI+E+ G+E+ +VIGGGNI RG+ +DR+TAD
Sbjct: 15 GEALMGDDAYGINEDVVSRIVSEIAEVTRLGVEVGVVIGGGNIFRGMKGAASGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D + ++G+ + V SA+ I++ +E YI AI++LEEG+VVIFA G
Sbjct: 75 YMGMLATVMNAMALADAMRRNGVEARVQSALRIDQVVEPYIRGRAIRHLEEGRVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +EI A+I+LKATKVDG+Y +DP K +A + +I+FDE I + L
Sbjct: 135 TGNPFFTTDTAAALRGSEIAAQIVLKATKVDGVYTADPKKDPAAQRFHRISFDEAIGRNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++D+TAF+ CRDQKLPI VFSI K GALKRV+ G++EGTLV+
Sbjct: 195 AVLDATAFALCRDQKLPINVFSIFKPGALKRVVMGEDEGTLVH 237
>gi|451822734|ref|YP_007459008.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775534|gb|AGF46575.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 203
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 149/178 (83%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI ++DL NK IF MNP+GQVPIL ER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIHNVDLKNKTKEIFTMNPHGQVPILSERNLILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
L RAR RL L NFEKE+F + ++EN+ + K A+E IR+RLI ++P+FLKNK++
Sbjct: 85 LTRARVRLFLYNFEKELFSQVKIIENQSIGENDKKVNEAKENIRERLIQMSPIFLKNKFL 144
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLD+ IAPLLWRL+YYGI+LSK+A+PL KYAERIFSR +Y+ESL+PAEK+M+
Sbjct: 145 LGDDFSMLDIAIAPLLWRLEYYGISLSKNAAPLQKYAERIFSRSAYIESLSPAEKLMR 202
>gi|394988467|ref|ZP_10381302.1| uridylate kinase [Sulfuricella denitrificans skB26]
gi|393791846|dbj|GAB70941.1| uridylate kinase [Sulfuricella denitrificans skB26]
Length = 240
Score = 251 bits (641), Expect = 2e-63, Method: Composition-based stats.
Identities = 126/222 (56%), Positives = 173/222 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN +I I+SEI +++ G+E+A+V+GGGNI RG++ +DR+TAD
Sbjct: 17 GEALMGDDSYGINRDVIDRIVSEIGDVIQLGVEVAVVVGGGNIFRGVAPASAGMDRATAD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D + ++G+I+ V SA++I++ E YI A++YLEEGKVVIF G
Sbjct: 77 YMGMLATVMNALALQDAMRRAGLIARVQSALTIQQVAEPYIRGKALRYLEEGKVVIFGAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALRA+E+ A+++LKATKVDG+Y +DP A Y +++FDE ISK L
Sbjct: 137 TGNPFFTTDTAAALRASEMAAQVVLKATKVDGVYTADPKTDPEATRYDRLSFDEAISKNL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA + CRDQK+P+ VFSI K GALKRV+ G++EGTLV
Sbjct: 197 KVMDATALALCRDQKMPLCVFSIFKHGALKRVVMGEDEGTLV 238
>gi|389721537|ref|ZP_10188289.1| 30S ribosomal protein S2 [Acinetobacter sp. HA]
gi|388608833|gb|EIM38029.1| 30S ribosomal protein S2 [Acinetobacter sp. HA]
Length = 248
Score = 251 bits (641), Expect = 2e-63, Method: Composition-based stats.
Identities = 118/232 (50%), Positives = 159/232 (68%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A E
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKAEE 242
>gi|118594911|ref|ZP_01552258.1| uridylate kinase [Methylophilales bacterium HTCC2181]
gi|118440689|gb|EAV47316.1| uridylate kinase [Methylophilales bacterium HTCC2181]
Length = 220
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 157/218 (72%)
Query: 604 MKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGM 663
M DA+ +N + I+ E+ G E+AIV+GGGNI RG++ +DR+TADYMGM
Sbjct: 1 MGKDAFGVNPETVTRIVREVKVAKDMGAEIAIVVGGGNIFRGVALGAAGMDRATADYMGM 60
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNP 723
LAT++N+LAL D + GI+S V SAI+I++ +E YI AIKYLEE ++VIFA G GNP
Sbjct: 61 LATVMNALALQDAMKHEGIVSRVQSAINIDQIVEPYIRGKAIKYLEEKRIVIFAAGTGNP 120
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
FFTTDT AALRA EI A+I++KATKVDGIY+ DP K SA Y ++FDEVI K L++MD
Sbjct: 121 FFTTDTAAALRAMEINAQIMIKATKVDGIYSDDPVKNPSATKYTNVSFDEVIQKNLKVMD 180
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TAF+ CRDQKLPI V I K ALK V+ G EGTLV
Sbjct: 181 ATAFTLCRDQKLPISVIDIFKENALKNVLLGIKEGTLV 218
>gi|255020967|ref|ZP_05293022.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC
51756]
gi|340781583|ref|YP_004748190.1| 30S ribosomal protein S2p (SAe) [Acidithiobacillus caldus SM-1]
gi|254969572|gb|EET27079.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC
51756]
gi|340555736|gb|AEK57490.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus SM-1]
Length = 251
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 115/221 (52%), Positives = 158/221 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQ+R+W+PKM+ YIFG RN+IHIINLE TL M A+ ++ Q+ G +L
Sbjct: 11 LLEAGAHFGHQSRYWHPKMAPYIFGERNRIHIINLEHTLPMLRTALAFLEQVSRKHGRVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKRQAR I EA R G +++QRWLGG LTNFKTI+ S++R +E++ +G++ K
Sbjct: 71 FVGTKRQAREAIEEEARRCGAFYVNQRWLGGTLTNFKTIRQSLRRFEELEQMSVDGTLEK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L R++ KL R +GGIK+M +PDA+F+IDVG+ AV+EA KL IP++GVVD
Sbjct: 131 LTKKEVLTLTREREKLERSLGGIKDMTGVPDALFVIDVGHENIAVAEAKKLGIPVVGVVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
+N P I+Y IPGNDD+ ++I LY DA L + E
Sbjct: 191 SNCDPSPIDYPIPGNDDATRAIRLYASLAADAILAGRQGSE 231
>gi|299769325|ref|YP_003731351.1| 30S ribosomal protein S2 [Acinetobacter oleivorans DR1]
gi|375135435|ref|YP_004996085.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2]
gi|424742706|ref|ZP_18171027.1| ribosomal protein S2 [Acinetobacter baumannii WC-141]
gi|427424720|ref|ZP_18914838.1| ribosomal protein S2 [Acinetobacter baumannii WC-136]
gi|298699413|gb|ADI89978.1| 30S ribosomal protein S2 [Acinetobacter oleivorans DR1]
gi|325122880|gb|ADY82403.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2]
gi|422943936|gb|EKU38946.1| ribosomal protein S2 [Acinetobacter baumannii WC-141]
gi|425698500|gb|EKU68138.1| ribosomal protein S2 [Acinetobacter baumannii WC-136]
Length = 250
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 120/240 (50%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 250
>gi|50085372|ref|YP_046882.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1]
gi|61215533|sp|Q6FA53.1|RS2_ACIAD RecName: Full=30S ribosomal protein S2
gi|49531348|emb|CAG69060.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1]
Length = 249
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 117/228 (51%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQA 238
>gi|169632956|ref|YP_001706692.1| 30S ribosomal protein S2 [Acinetobacter baumannii SDF]
gi|169795290|ref|YP_001713083.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE]
gi|184158845|ref|YP_001847184.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU]
gi|213158045|ref|YP_002320096.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB0057]
gi|215482823|ref|YP_002325026.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294]
gi|239502457|ref|ZP_04661767.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB900]
gi|260554200|ref|ZP_05826457.1| ribosomal protein S2 [Acinetobacter sp. RUH2624]
gi|260556753|ref|ZP_05828971.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|301345999|ref|ZP_07226740.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB056]
gi|301513133|ref|ZP_07238370.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB058]
gi|301595621|ref|ZP_07240629.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB059]
gi|384131123|ref|YP_005513735.1| rpsB [Acinetobacter baumannii 1656-2]
gi|385238258|ref|YP_005799597.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715]
gi|387123223|ref|YP_006289105.1| 30S ribosomal protein S2 [Acinetobacter baumannii MDR-TJ]
gi|403674256|ref|ZP_10936520.1| 30S ribosomal protein S2 [Acinetobacter sp. NCTC 10304]
gi|407933467|ref|YP_006849110.1| 30S ribosomal protein S2 [Acinetobacter baumannii TYTH-1]
gi|416147411|ref|ZP_11601789.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB210]
gi|417546661|ref|ZP_12197747.1| ribosomal protein S2 [Acinetobacter baumannii OIFC032]
gi|417549055|ref|ZP_12200135.1| ribosomal protein S2 [Acinetobacter baumannii Naval-18]
gi|417552501|ref|ZP_12203571.1| ribosomal protein S2 [Acinetobacter baumannii Naval-81]
gi|417561675|ref|ZP_12212554.1| ribosomal protein S2 [Acinetobacter baumannii OIFC137]
gi|417567272|ref|ZP_12218144.1| ribosomal protein S2 [Acinetobacter baumannii OIFC143]
gi|417569385|ref|ZP_12220243.1| ribosomal protein S2 [Acinetobacter baumannii OIFC189]
gi|417571889|ref|ZP_12222743.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC-5]
gi|417577818|ref|ZP_12228655.1| ribosomal protein S2 [Acinetobacter baumannii Naval-17]
gi|417869156|ref|ZP_12514151.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH1]
gi|417874120|ref|ZP_12518979.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH2]
gi|417879425|ref|ZP_12523996.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH3]
gi|417882483|ref|ZP_12526780.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH4]
gi|421198207|ref|ZP_15655374.1| ribosomal protein S2 [Acinetobacter baumannii OIFC109]
gi|421204011|ref|ZP_15661142.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC12]
gi|421457274|ref|ZP_15906611.1| ribosomal protein S2 [Acinetobacter baumannii IS-123]
gi|421534568|ref|ZP_15980840.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC30]
gi|421620334|ref|ZP_16061271.1| ribosomal protein S2 [Acinetobacter baumannii OIFC074]
gi|421626240|ref|ZP_16067069.1| ribosomal protein S2 [Acinetobacter baumannii OIFC098]
gi|421628397|ref|ZP_16069180.1| ribosomal protein S2 [Acinetobacter baumannii OIFC180]
gi|421632126|ref|ZP_16072788.1| ribosomal protein S2 [Acinetobacter baumannii Naval-13]
gi|421641541|ref|ZP_16082078.1| ribosomal protein S2 [Acinetobacter baumannii IS-235]
gi|421646476|ref|ZP_16086926.1| ribosomal protein S2 [Acinetobacter baumannii IS-251]
gi|421651752|ref|ZP_16092119.1| ribosomal protein S2 [Acinetobacter baumannii OIFC0162]
gi|421654084|ref|ZP_16094415.1| ribosomal protein S2 [Acinetobacter baumannii Naval-72]
gi|421660369|ref|ZP_16100569.1| ribosomal protein S2 [Acinetobacter baumannii Naval-83]
gi|421664113|ref|ZP_16104253.1| ribosomal protein S2 [Acinetobacter baumannii OIFC110]
gi|421668353|ref|ZP_16108392.1| ribosomal protein S2 [Acinetobacter baumannii OIFC087]
gi|421671761|ref|ZP_16111731.1| ribosomal protein S2 [Acinetobacter baumannii OIFC099]
gi|421674780|ref|ZP_16114709.1| ribosomal protein S2 [Acinetobacter baumannii OIFC065]
gi|421677943|ref|ZP_16117832.1| ribosomal protein S2 [Acinetobacter baumannii OIFC111]
gi|421686206|ref|ZP_16125961.1| ribosomal protein S2 [Acinetobacter baumannii IS-143]
gi|421691700|ref|ZP_16131359.1| ribosomal protein S2 [Acinetobacter baumannii IS-116]
gi|421697510|ref|ZP_16137073.1| ribosomal protein S2 [Acinetobacter baumannii WC-692]
gi|421697814|ref|ZP_16137359.1| ribosomal protein S2 [Acinetobacter baumannii IS-58]
gi|421704011|ref|ZP_16143461.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1122]
gi|421707965|ref|ZP_16147346.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1219]
gi|421786977|ref|ZP_16223355.1| ribosomal protein S2 [Acinetobacter baumannii Naval-82]
gi|421794342|ref|ZP_16230443.1| ribosomal protein S2 [Acinetobacter baumannii Naval-2]
gi|421795450|ref|ZP_16231533.1| ribosomal protein S2 [Acinetobacter baumannii Naval-21]
gi|421798824|ref|ZP_16234834.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC1]
gi|421804513|ref|ZP_16240423.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-694]
gi|421806701|ref|ZP_16242563.1| ribosomal protein S2 [Acinetobacter baumannii OIFC035]
gi|424051650|ref|ZP_17789182.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab11111]
gi|424054890|ref|ZP_17792414.1| 30S ribosomal protein S2 [Acinetobacter nosocomialis Ab22222]
gi|424059270|ref|ZP_17796761.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab33333]
gi|424063201|ref|ZP_17800686.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab44444]
gi|425739570|ref|ZP_18857769.1| ribosomal protein S2 [Acinetobacter baumannii WC-487]
gi|425750274|ref|ZP_18868241.1| ribosomal protein S2 [Acinetobacter baumannii WC-348]
gi|425753412|ref|ZP_18871296.1| ribosomal protein S2 [Acinetobacter baumannii Naval-113]
gi|445400634|ref|ZP_21430105.1| ribosomal protein S2 [Acinetobacter baumannii Naval-57]
gi|445436691|ref|ZP_21440696.1| ribosomal protein S2 [Acinetobacter baumannii OIFC021]
gi|445449337|ref|ZP_21444259.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-92]
gi|445460064|ref|ZP_21447973.1| ribosomal protein S2 [Acinetobacter baumannii OIFC047]
gi|445473959|ref|ZP_21453071.1| ribosomal protein S2 [Acinetobacter baumannii OIFC338]
gi|445477425|ref|ZP_21454341.1| ribosomal protein S2 [Acinetobacter baumannii Naval-78]
gi|445492110|ref|ZP_21460057.1| ribosomal protein S2 [Acinetobacter baumannii AA-014]
gi|169148217|emb|CAM86080.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE]
gi|169151748|emb|CAP00552.1| 30S ribosomal protein S2 [Acinetobacter baumannii]
gi|183210439|gb|ACC57837.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU]
gi|213057205|gb|ACJ42107.1| ribosomal protein S2 [Acinetobacter baumannii AB0057]
gi|213986068|gb|ACJ56367.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294]
gi|260404671|gb|EEW98184.1| ribosomal protein S2 [Acinetobacter sp. RUH2624]
gi|260410012|gb|EEX03312.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|322507343|gb|ADX02797.1| rpsB [Acinetobacter baumannii 1656-2]
gi|323518758|gb|ADX93139.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715]
gi|333365642|gb|EGK47656.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB210]
gi|342228677|gb|EGT93557.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH3]
gi|342229874|gb|EGT94724.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH2]
gi|342231563|gb|EGT96372.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH1]
gi|342237844|gb|EGU02297.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH4]
gi|385877715|gb|AFI94810.1| ribosomal protein S2 [Acinetobacter baumannii MDR-TJ]
gi|395524257|gb|EJG12346.1| ribosomal protein S2 [Acinetobacter baumannii OIFC137]
gi|395552944|gb|EJG18952.1| ribosomal protein S2 [Acinetobacter baumannii OIFC143]
gi|395553608|gb|EJG19614.1| ribosomal protein S2 [Acinetobacter baumannii OIFC189]
gi|395566175|gb|EJG27820.1| ribosomal protein S2 [Acinetobacter baumannii OIFC109]
gi|395568515|gb|EJG29185.1| ribosomal protein S2 [Acinetobacter baumannii Naval-17]
gi|398326552|gb|EJN42699.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC12]
gi|400206998|gb|EJO37969.1| ribosomal protein S2 [Acinetobacter baumannii IS-123]
gi|400207457|gb|EJO38427.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC-5]
gi|400384549|gb|EJP43227.1| ribosomal protein S2 [Acinetobacter baumannii OIFC032]
gi|400387023|gb|EJP50096.1| ribosomal protein S2 [Acinetobacter baumannii Naval-18]
gi|400392760|gb|EJP59806.1| ribosomal protein S2 [Acinetobacter baumannii Naval-81]
gi|404558271|gb|EKA63555.1| ribosomal protein S2 [Acinetobacter baumannii WC-692]
gi|404562309|gb|EKA67533.1| ribosomal protein S2 [Acinetobacter baumannii IS-116]
gi|404568808|gb|EKA73903.1| ribosomal protein S2 [Acinetobacter baumannii IS-143]
gi|404573240|gb|EKA78279.1| ribosomal protein S2 [Acinetobacter baumannii IS-58]
gi|404665206|gb|EKB33169.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab11111]
gi|404670008|gb|EKB37900.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab33333]
gi|404674769|gb|EKB42505.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab44444]
gi|407191058|gb|EKE62269.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1219]
gi|407191180|gb|EKE62390.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1122]
gi|407439639|gb|EKF46164.1| 30S ribosomal protein S2 [Acinetobacter nosocomialis Ab22222]
gi|407902048|gb|AFU38879.1| 30S ribosomal protein S2 [Acinetobacter baumannii TYTH-1]
gi|408507685|gb|EKK09379.1| ribosomal protein S2 [Acinetobacter baumannii OIFC0162]
gi|408511934|gb|EKK13581.1| ribosomal protein S2 [Acinetobacter baumannii Naval-72]
gi|408515087|gb|EKK16683.1| ribosomal protein S2 [Acinetobacter baumannii IS-235]
gi|408517476|gb|EKK19016.1| ribosomal protein S2 [Acinetobacter baumannii IS-251]
gi|408695511|gb|EKL41066.1| ribosomal protein S2 [Acinetobacter baumannii OIFC098]
gi|408700629|gb|EKL46077.1| ribosomal protein S2 [Acinetobacter baumannii OIFC074]
gi|408705393|gb|EKL50735.1| ribosomal protein S2 [Acinetobacter baumannii Naval-83]
gi|408707504|gb|EKL52788.1| ribosomal protein S2 [Acinetobacter baumannii OIFC180]
gi|408710262|gb|EKL55492.1| ribosomal protein S2 [Acinetobacter baumannii Naval-13]
gi|408712410|gb|EKL57593.1| ribosomal protein S2 [Acinetobacter baumannii OIFC110]
gi|409987458|gb|EKO43639.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC30]
gi|410380245|gb|EKP32833.1| ribosomal protein S2 [Acinetobacter baumannii OIFC087]
gi|410381723|gb|EKP34288.1| ribosomal protein S2 [Acinetobacter baumannii OIFC099]
gi|410384080|gb|EKP36599.1| ribosomal protein S2 [Acinetobacter baumannii OIFC065]
gi|410392824|gb|EKP45181.1| ribosomal protein S2 [Acinetobacter baumannii OIFC111]
gi|410394489|gb|EKP46817.1| ribosomal protein S2 [Acinetobacter baumannii Naval-2]
gi|410401947|gb|EKP54082.1| ribosomal protein S2 [Acinetobacter baumannii Naval-21]
gi|410409939|gb|EKP61860.1| ribosomal protein S2 [Acinetobacter baumannii Naval-82]
gi|410411331|gb|EKP63205.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC1]
gi|410411884|gb|EKP63753.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-694]
gi|410417244|gb|EKP69014.1| ribosomal protein S2 [Acinetobacter baumannii OIFC035]
gi|425487676|gb|EKU54034.1| ribosomal protein S2 [Acinetobacter baumannii WC-348]
gi|425496390|gb|EKU62522.1| ribosomal protein S2 [Acinetobacter baumannii WC-487]
gi|425498024|gb|EKU64113.1| ribosomal protein S2 [Acinetobacter baumannii Naval-113]
gi|444754690|gb|ELW79303.1| ribosomal protein S2 [Acinetobacter baumannii OIFC021]
gi|444756682|gb|ELW81221.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-92]
gi|444763349|gb|ELW87685.1| ribosomal protein S2 [Acinetobacter baumannii AA-014]
gi|444768671|gb|ELW92882.1| ribosomal protein S2 [Acinetobacter baumannii OIFC338]
gi|444773299|gb|ELW97395.1| ribosomal protein S2 [Acinetobacter baumannii OIFC047]
gi|444776503|gb|ELX00545.1| ribosomal protein S2 [Acinetobacter baumannii Naval-78]
gi|444783208|gb|ELX07069.1| ribosomal protein S2 [Acinetobacter baumannii Naval-57]
gi|452948172|gb|EME53653.1| 30S ribosomal protein S2 [Acinetobacter baumannii MSP4-16]
Length = 250
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 120/240 (50%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 250
>gi|440731292|ref|ZP_20911324.1| 30S ribosomal protein S2 [Xanthomonas translucens DAR61454]
gi|440373775|gb|ELQ10520.1| 30S ribosomal protein S2 [Xanthomonas translucens DAR61454]
Length = 265
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 112/218 (51%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+PKM+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R G PF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDSVKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK MN +PDA+F+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P+ ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|160872239|ref|ZP_02062371.1| ribosomal protein S2 [Rickettsiella grylli]
gi|159121038|gb|EDP46376.1| ribosomal protein S2 [Rickettsiella grylli]
Length = 262
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 168/234 (71%), Gaps = 1/234 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M + ++ +AGVHFGH+T F PKM YI+G RN I II+LEKT +A+ YI +
Sbjct: 1 MSATATLRQLFEAGVHFGHRTCFREPKMMPYIYGVRNGISIIDLEKTREYITEALHYIAK 60
Query: 227 LGFSKGT-LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD 285
+ G+ +LFVGTKR AR ++ +A+R GMP+++ RWLGGLLTN++TI+ SI+RLKE++
Sbjct: 61 IAARPGSKILFVGTKRAARDLVKEQALRCGMPYVNHRWLGGLLTNYRTIRQSIKRLKELE 120
Query: 286 LFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIK 345
L +G +L+KKEAL R+ KL R +GGIK+M+ +PD +F+ID GY A+ EA K
Sbjct: 121 LQSKDGRFNQLTKKEALNLQRQMDKLERSLGGIKDMSGLPDVLFVIDRGYEHIAICEAQK 180
Query: 346 LNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
L IP+I +VDTNHSP+GI+YVIPGNDD++++I LYT+ + + L+A+ + R+
Sbjct: 181 LKIPVISIVDTNHSPEGIDYVIPGNDDASRAITLYTQMVSETILEARAEAKKRA 234
>gi|303256166|ref|ZP_07342182.1| stringent starvation protein A [Burkholderiales bacterium 1_1_47]
gi|331001220|ref|ZP_08324846.1| stringent starvation protein A [Parasutterella excrementihominis
YIT 11859]
gi|302860895|gb|EFL83970.1| stringent starvation protein A [Burkholderiales bacterium 1_1_47]
gi|329568947|gb|EGG50743.1| stringent starvation protein A [Parasutterella excrementihominis
YIT 11859]
Length = 201
Score = 251 bits (640), Expect = 2e-63, Method: Composition-based stats.
Identities = 114/178 (64%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEIRDIDL++KP++I MNPYG+VPILVERDL+LYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIRDIDLYHKPEDINVMNPYGEVPILVERDLVLYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RAR RL+L N E+EIF H++ LEN +S + +ARE IRD+L LAP K KY+
Sbjct: 85 VERARTRLLLFNLEREIFKHVHTLENR--ASSDEARVKAREAIRDQLTGLAPAVAKKKYL 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+GDEFSMLD+ +APLLWRL+YYGI L + P+ KYAER+FSRP+++E+LTP+E++M+
Sbjct: 143 MGDEFSMLDIALAPLLWRLNYYGIELPPAGMPVQKYAERVFSRPAFIEALTPSERVMR 200
>gi|262278376|ref|ZP_06056161.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202]
gi|262258727|gb|EEY77460.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202]
Length = 250
Score = 250 bits (639), Expect = 2e-63, Method: Composition-based stats.
Identities = 117/228 (51%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHESIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQA 238
>gi|404380162|ref|ZP_10985201.1| uridylate kinase [Simonsiella muelleri ATCC 29453]
gi|404294402|gb|EFG30017.2| uridylate kinase [Simonsiella muelleri ATCC 29453]
Length = 249
Score = 250 bits (639), Expect = 3e-63, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GEALM D + IN I ++ ++ EIV G+E+AIV+GGGNI RG+S
Sbjct: 16 KYKRVLLKLS--GEALMGSDPFGINRETIMQMVQQVKEIVELGVEVAIVVGGGNIFRGVS 73
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGMLAT++N+LAL + L G + V SA+++++ E+Y A++Y
Sbjct: 74 AQAGSMDRATADYMGMLATVMNALALKEALESLGTKARVQSALTMQQVAEAYARPKALQY 133
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE++ +++LKAT VDGIY +DP K SA Y+
Sbjct: 134 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMQCDVMLKATNVDGIYTADPKKDPSATRYQ 193
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TFDE I KKL++MDSTAF+ C+++ L I VF I K GALK V+ G++EGTLV+
Sbjct: 194 SVTFDEAIKKKLKVMDSTAFTLCQERNLNIVVFGIQKMGALKSVVLGEDEGTLVH 248
>gi|260772222|ref|ZP_05881138.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14]
gi|260611361|gb|EEX36564.1| SSU ribosomal protein S2p (SAe) [Vibrio metschnikovii CIP 69.14]
Length = 242
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 171/240 (71%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELVKIGDKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQATDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDGI+Y+IPGNDD+ +++ LY A++V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGIDYIIPGNDDAIRAVQLYLNAA------AESVNEGRNKDVAAVAE-KDGFVEA 241
>gi|410623465|ref|ZP_11334278.1| small subunit ribosomal protein S2 [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410156957|dbj|GAC29652.1| small subunit ribosomal protein S2 [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 244
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 168/240 (70%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM+ YIFG RN++HIINLEKT+ ++ +A+ Y+ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMAQYIFGARNRVHIINLEKTVPLFNEALSYLSGVSHKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A + ++++RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASIAVREAAEKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEVQSADGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL +GGIKNM +PD IF+ID + AV+EA L IP++GVVD
Sbjct: 129 LTKKEVLMLQREMTKLEGSLGGIKNMGGLPDVIFVIDADHEHIAVTEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++YVIPGNDD+ +++ LYT DA + E R++ + + K +EA
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVNLYTNAAADA------INEGRNQDIIVAVSEKDDFVEA 242
>gi|293609659|ref|ZP_06691961.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828111|gb|EFF86474.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 267
Score = 250 bits (638), Expect = 3e-63, Method: Composition-based stats.
Identities = 120/240 (50%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 28 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 87
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 88 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 147
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 148 LTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 207
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 208 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 267
>gi|402758349|ref|ZP_10860605.1| 30S ribosomal protein S2 [Acinetobacter sp. NCTC 7422]
gi|406035717|ref|ZP_11043081.1| 30S ribosomal protein S2 [Acinetobacter parvus DSM 16617 = CIP
108168]
gi|425744852|ref|ZP_18862907.1| ribosomal protein S2 [Acinetobacter baumannii WC-323]
gi|425490448|gb|EKU56748.1| ribosomal protein S2 [Acinetobacter baumannii WC-323]
Length = 250
Score = 250 bits (638), Expect = 3e-63, Method: Composition-based stats.
Identities = 119/240 (49%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 250
>gi|332850397|ref|ZP_08432717.1| ribosomal protein S2 [Acinetobacter baumannii 6013150]
gi|332871836|ref|ZP_08440259.1| ribosomal protein S2 [Acinetobacter baumannii 6013113]
gi|332875272|ref|ZP_08443104.1| ribosomal protein S2 [Acinetobacter baumannii 6014059]
gi|384143964|ref|YP_005526674.1| 30S ribosomal protein S2 [Acinetobacter baumannii MDR-ZJ06]
gi|332730668|gb|EGJ61979.1| ribosomal protein S2 [Acinetobacter baumannii 6013150]
gi|332731165|gb|EGJ62465.1| ribosomal protein S2 [Acinetobacter baumannii 6013113]
gi|332736529|gb|EGJ67524.1| ribosomal protein S2 [Acinetobacter baumannii 6014059]
gi|347594457|gb|AEP07178.1| ribosomal protein S2 [Acinetobacter baumannii MDR-ZJ06]
Length = 267
Score = 250 bits (638), Expect = 4e-63, Method: Composition-based stats.
Identities = 120/240 (50%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 28 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 87
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 88 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 147
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 148 LTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 207
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 208 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 267
>gi|359427842|ref|ZP_09218886.1| 30S ribosomal protein S2 [Acinetobacter sp. NBRC 100985]
gi|358236733|dbj|GAB00425.1| 30S ribosomal protein S2 [Acinetobacter sp. NBRC 100985]
Length = 250
Score = 250 bits (638), Expect = 4e-63, Method: Composition-based stats.
Identities = 119/240 (49%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A + K EA
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGDDAAKDASEA 250
>gi|294649929|ref|ZP_06727321.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194]
gi|292824158|gb|EFF82969.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194]
Length = 282
Score = 249 bits (637), Expect = 4e-63, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 43 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 102
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 103 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 162
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 163 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 222
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A
Sbjct: 223 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQA 270
>gi|326794435|ref|YP_004312255.1| 30S ribosomal protein S2 [Marinomonas mediterranea MMB-1]
gi|326545199|gb|ADZ90419.1| ribosomal protein S2 [Marinomonas mediterranea MMB-1]
Length = 244
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 165/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++Q G HFGHQTR+WNPKM +IFG RNKIHIINLE T+ +A+ + ++ +K +L
Sbjct: 9 LLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALALVKKMTENKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I +A R+ MP+++ RWLGG+LTN+KTI+ SI+RL++++ + +G+ K
Sbjct: 69 FVGTKRAAAKSIKEQAARSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLENQMNDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++DV + + A+ EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRELEKLELSLGGIKDMGGLPDALFVVDVDHERIAIKEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PDGI+YVIP NDD+ +++ LY DA L+ + V + + E +A
Sbjct: 189 TNSNPDGIDYVIPANDDAIRAVQLYVSAFADAALEGRAVAAGTADEFVEVNEATEA 244
>gi|258620996|ref|ZP_05716030.1| 30S ribosomal protein S2 [Vibrio mimicus VM573]
gi|258586384|gb|EEW11099.1| 30S ribosomal protein S2 [Vibrio mimicus VM573]
Length = 289
Score = 249 bits (637), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 178/261 (68%), Gaps = 11/261 (4%)
Query: 159 RIFSRPSYMESLTPAE----KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTL 214
R RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+
Sbjct: 35 RGMWRPNPIEDFKMASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTV 94
Query: 215 YMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTI 274
M+ +A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT+
Sbjct: 95 PMFNEALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTV 154
Query: 275 KTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVG 334
+ SI+RLKE+++ T+G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID
Sbjct: 155 RQSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDAD 214
Query: 335 YHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
+ A+ EA L IP+ VVDTN SPDG++Y+IPGNDD+ +++ LY + +A +
Sbjct: 215 HEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEA------I 268
Query: 395 GELRSKTLAPIMECKKALIEA 415
E R+K +A + E K +EA
Sbjct: 269 NEGRNKDVAVVAE-KDGFVEA 288
>gi|304312448|ref|YP_003812046.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1]
gi|301798181|emb|CBL46403.1| 30S ribosomal protein S2 [gamma proteobacterium HdN1]
Length = 250
Score = 249 bits (636), Expect = 5e-63, Method: Composition-based stats.
Identities = 115/225 (51%), Positives = 162/225 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ +I K +
Sbjct: 8 ELIKAGAHFGHQTRFWNPKMKQYIFGARNKIHIINLEHTVPALNDALNFINGQAARKNKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A +I +A RAGMP+++ RWLGG+LTN+KTI+ SI+RL++++ +G+
Sbjct: 68 LFVGTKRAASTLIQEQATRAGMPYVNHRWLGGMLTNWKTIRQSIRRLRDLETESKDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R+ KL R GGIK+M +PDAIF++DV + + A++EA KL IP+IG+V
Sbjct: 128 KLTKKEALMRTRELEKLERSFGGIKDMGGLPDAIFVVDVMHERIAITEANKLGIPVIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
DTN PDG++YVIP NDD+ K++ LY +A L+ + + ++
Sbjct: 188 DTNSDPDGVDYVIPANDDAIKAVELYVTAFANACLEGREYAQAQA 232
>gi|333894186|ref|YP_004468061.1| 30S ribosomal protein S2 [Alteromonas sp. SN2]
gi|332994204|gb|AEF04259.1| ribosomal protein S2 [Alteromonas sp. SN2]
Length = 243
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 159/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM YIFG RNK+HIINLEKT+ ++ A+ Y+ + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPYIFGARNKVHIINLEKTVPLFNNALNYLSSVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + AV+ ++++RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGDAVKDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQKSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDAIF++D + A++EA L IP++GVVD
Sbjct: 129 LTKKEALMLQREMEKLENSLGGIKDMGGLPDAIFVVDADHEHIAITEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LY +A + +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLDAAANAVISGR 225
>gi|325913955|ref|ZP_08176311.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937]
gi|325539724|gb|EGD11364.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937]
Length = 266
Score = 249 bits (636), Expect = 6e-63, Method: Composition-based stats.
Identities = 114/218 (52%), Positives = 158/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGH+T +WNPKM+ YIFG R KIHIINLEKT+ ++ A+ ++ + +GT+
Sbjct: 3 QMLEAGVHFGHRTCYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRGTV 62
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR I EA R MPF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 63 LFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFE 122
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL+ +GGIK MN +PDAIF+ID+G+ A+ EA KL IP+I VV
Sbjct: 123 KLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVV 182
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 183 DTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 220
>gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244]
gi|226836696|gb|EEH69079.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244]
Length = 267
Score = 249 bits (635), Expect = 7e-63, Method: Composition-based stats.
Identities = 116/228 (50%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 28 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 87
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 88 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 147
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 148 LTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 207
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A
Sbjct: 208 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQA 255
>gi|262375514|ref|ZP_06068747.1| ribosomal protein S2 [Acinetobacter lwoffii SH145]
gi|262309768|gb|EEY90898.1| ribosomal protein S2 [Acinetobacter lwoffii SH145]
gi|407006811|gb|EKE22632.1| hypothetical protein ACD_6C00770G0006 [uncultured bacterium]
Length = 248
Score = 248 bits (634), Expect = 9e-63, Method: Composition-based stats.
Identities = 117/232 (50%), Positives = 158/232 (68%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRDYIFGARNKIHIINLEHTVPALNDALNFANNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PD ++YVIPGNDD+ +++ LY + DA L K + ++ A E
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKAEE 242
>gi|262372147|ref|ZP_06065426.1| ribosomal protein S2 [Acinetobacter junii SH205]
gi|262312172|gb|EEY93257.1| ribosomal protein S2 [Acinetobacter junii SH205]
Length = 250
Score = 248 bits (634), Expect = 1e-62, Method: Composition-based stats.
Identities = 118/240 (49%), Positives = 162/240 (67%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PD ++YVIPGNDD+ +++ LY + DA + K + ++ A + K EA
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKGDDAAKDASEA 250
>gi|255321104|ref|ZP_05362271.1| ribosomal protein S2 [Acinetobacter radioresistens SK82]
gi|255301843|gb|EET81093.1| ribosomal protein S2 [Acinetobacter radioresistens SK82]
Length = 272
Score = 248 bits (634), Expect = 1e-62, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 158/232 (68%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 35 LLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 94
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 95 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 154
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 155 LTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 214
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PD ++YVIPGNDD+ +++ LY + DA + K + ++ A E
Sbjct: 215 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKAEE 266
>gi|209695851|ref|YP_002263781.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238]
gi|238054498|sp|B6EK57.1|RS2_ALISL RecName: Full=30S ribosomal protein S2
gi|208009804|emb|CAQ80111.1| 30S ribosomal protein S2 [Aliivibrio salmonicida LFI1238]
Length = 243
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 166/240 (69%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKIGNKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTNFKT++ SI+RLKE ++ +G+ +
Sbjct: 69 FVGTKRAASEAVKEAAINSDQYYVNNRWLGGMLTNFKTVRQSIKRLKEYEVQAQDGTFEQ 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKEAL+ R KL + +GGIKNMN +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 ITKKEALMRTRSMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAVKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ ++I LY D +V R++ +A + K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLNAAAD------SVKSGRNQDVAAAVAEKDGFVEA 242
>gi|424807472|ref|ZP_18232880.1| 30S ribosomal protein S2 [Vibrio mimicus SX-4]
gi|342325414|gb|EGU21194.1| 30S ribosomal protein S2 [Vibrio mimicus SX-4]
Length = 237
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 171/240 (71%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 64 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 124 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY + +A + E R+K +A + E K +EA
Sbjct: 184 TNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEA------INEGRNKDVAVVAE-KDGFVEA 236
>gi|291613117|ref|YP_003523274.1| glutathione S-transferase domain protein [Sideroxydans
lithotrophicus ES-1]
gi|291583229|gb|ADE10887.1| Glutathione S-transferase domain protein [Sideroxydans
lithotrophicus ES-1]
Length = 199
Score = 248 bits (633), Expect = 1e-62, Method: Composition-based stats.
Identities = 111/178 (62%), Positives = 144/178 (80%), Gaps = 4/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF++ D+D++NKP+++ MNPY VP+LVERDLILYE+NIINEYIDERFP+PQLM DP
Sbjct: 25 MDFQVIDVDVYNKPEDLAVMNPYNTVPVLVERDLILYEANIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE E+F H+ LE+ K + ++AR +R+ L ++P+F K K+M
Sbjct: 85 VMRARARLFLHRFENELFCHIPGLESSNAKVA----EKARASVRENLTQISPVFTKQKFM 140
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI L K A+PL+KYAER+FSRP+Y+E++TPAEK M+
Sbjct: 141 LGDEFSMLDVAIAPLLWRLDHYGIQLDKEAAPLMKYAERLFSRPAYIEAMTPAEKAMR 198
>gi|254785174|ref|YP_003072602.1| 30S ribosomal protein S2 [Teredinibacter turnerae T7901]
gi|259495226|sp|C5BQF6.1|RS2_TERTT RecName: Full=30S ribosomal protein S2
gi|237686481|gb|ACR13745.1| ribosomal protein S2 [Teredinibacter turnerae T7901]
Length = 250
Score = 248 bits (633), Expect = 1e-62, Method: Composition-based stats.
Identities = 117/220 (53%), Positives = 157/220 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM YIFG RNKIHIINLE T+ + A+ I Q+ K +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMGQYIFGARNKIHIINLEHTVPAFNDALAVIKQMASQKKKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A+ + +A RAGMP++ RWLGG+LTN+KTI+ SI+ ++++ +G+ K
Sbjct: 69 FVGTKRAAQKTVKEQAERAGMPYVSNRWLGGMLTNYKTIRGSIRSYRDLETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL IGGIK+M +PDA+F+IDV + + A+ EA KL IP+IGVVD
Sbjct: 129 LTKKEALMRTRTMDKLELSIGGIKDMGGLPDAMFVIDVEHERIAIQEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
TN P G++YVIPGNDD+ ++I LY + DA L+ G
Sbjct: 189 TNSDPAGVDYVIPGNDDAIRAIKLYVTAMADACLEGAREG 228
>gi|358010681|ref|ZP_09142491.1| 30S ribosomal protein S2 [Acinetobacter sp. P8-3-8]
gi|403050826|ref|ZP_10905310.1| 30S ribosomal protein S2 [Acinetobacter bereziniae LMG 1003]
Length = 250
Score = 248 bits (632), Expect = 2e-62, Method: Composition-based stats.
Identities = 115/228 (50%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RN+IHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNRIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+FIIDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERSLGGVKNMGGLPDALFIIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD +++VIPGNDD+ +++ LY + DA L K + ++ A
Sbjct: 191 TNSNPDNVDFVIPGNDDAIRAVTLYASAMADAILAGKEYAQTQANAQA 238
>gi|87118627|ref|ZP_01074526.1| 30S ribosomal protein S2 [Marinomonas sp. MED121]
gi|86166261|gb|EAQ67527.1| 30S ribosomal protein S2 [Marinomonas sp. MED121]
Length = 245
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 163/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++Q G HFGHQTR+WNPKM +IFG RNKIHIINLE T+ +A+ + ++ +K +L
Sbjct: 9 LLQVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNEALELVKKMAENKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + +A R+ MP+++ RWLGG+LTN+KTI+ SI+RL++++ + +G+ K
Sbjct: 69 FVGTKRAASKTMKEQAQRSSMPYVNHRWLGGMLTNYKTIRASIKRLRDLETQMNDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKEAL+ R+ KL IGGIK+M +PD +F++DV + + A+ EA KL IP+IGVVD
Sbjct: 129 ITKKEALMRTRELEKLELSIGGIKDMGGLPDILFVVDVDHERIAIKEANKLGIPVIGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PDGI+YVIP NDD+ +++ LY DA L+ + + + E +A
Sbjct: 189 TNSNPDGIDYVIPANDDAIRAVQLYVTAFADAVLEGRGAAAGSADEFVEVSEATEA 244
>gi|15839169|ref|NP_299857.1| 30S ribosomal protein S2 [Xylella fastidiosa 9a5c]
gi|28199827|ref|NP_780141.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1]
gi|182682578|ref|YP_001830738.1| 30S ribosomal protein S2 [Xylella fastidiosa M23]
gi|386083912|ref|YP_006000194.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417559015|ref|ZP_12209969.1| Ribosomal protein S2 [Xylella fastidiosa EB92.1]
gi|54039457|sp|P66547.1|RS2_XYLFT RecName: Full=30S ribosomal protein S2
gi|54041957|sp|P66546.1|RS2_XYLFA RecName: Full=30S ribosomal protein S2
gi|238691116|sp|B2I9U3.1|RS2_XYLF2 RecName: Full=30S ribosomal protein S2
gi|9107797|gb|AAF85377.1|AE004065_2 30S ribosomal protein S2 [Xylella fastidiosa 9a5c]
gi|28057948|gb|AAO29790.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1]
gi|71732029|gb|EAO34086.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa subsp. sandyi Ann-1]
gi|182632688|gb|ACB93464.1| ribosomal protein S2 [Xylella fastidiosa M23]
gi|307578859|gb|ADN62828.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338178283|gb|EGO81274.1| Ribosomal protein S2 [Xylella fastidiosa EB92.1]
Length = 266
Score = 248 bits (632), Expect = 2e-62, Method: Composition-based stats.
Identities = 115/218 (52%), Positives = 158/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+ +PKMS IFG R KIHIINLEKT+ ++ A+ ++ + +G++
Sbjct: 8 QMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAVAQKRGSV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I EA R GMP++ QRWLGG LTNF+T+K S+ RLKE++L T+G+
Sbjct: 68 LFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELAETDGTFS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R+ KL +GGIK+MN IPDAIF+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|226941800|ref|YP_002796874.1| SspA [Laribacter hongkongensis HLHK9]
gi|226716727|gb|ACO75865.1| SspA [Laribacter hongkongensis HLHK9]
Length = 212
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 147/178 (82%), Gaps = 3/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF+I+D+D+ NKP+++ MNPY +VP+LVERDLILYESNIINEYIDERFP+PQLM +DP
Sbjct: 37 MDFQIQDVDVLNKPEDLAVMNPYNEVPVLVERDLILYESNIINEYIDERFPHPQLMPADP 96
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE E+F H+ LE K ++ARE IRD L T+AP+F + K+M
Sbjct: 97 IMRARARLFLHRFENELFTHVKTLEGAPKKAEA---EKAREAIRDSLTTIAPVFSRQKFM 153
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSM+DV IAPLLWRL++YGI+L K+A+P++KY+ERIF+R ++++SLTPAEK M+
Sbjct: 154 LGDEFSMIDVAIAPLLWRLEHYGIDLGKAAAPILKYSERIFTRQAFIDSLTPAEKAMR 211
>gi|433678501|ref|ZP_20510353.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430816385|emb|CCP40843.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 265
Score = 248 bits (632), Expect = 2e-62, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 157/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R+W+P M+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R G PF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDSVKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK MN +PDA+F+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|71275210|ref|ZP_00651497.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|170731204|ref|YP_001776637.1| 30S ribosomal protein S2 [Xylella fastidiosa M12]
gi|238687956|sp|B0U5I9.1|RS2_XYLFM RecName: Full=30S ribosomal protein S2
gi|71164019|gb|EAO13734.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|71728257|gb|EAO30438.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa subsp. sandyi Ann-1]
gi|167965997|gb|ACA13007.1| 30S ribosomal protein S2 [Xylella fastidiosa M12]
Length = 266
Score = 247 bits (631), Expect = 2e-62, Method: Composition-based stats.
Identities = 115/218 (52%), Positives = 158/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+ +PKMS IFG R KIHIINLEKT+ ++ A+ ++ + +G++
Sbjct: 8 QMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAVAQKRGSV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR I EA R GMP++ QRWLGG LTNF+T+K S+ RLKE++L T+G+
Sbjct: 68 LFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELAETDGTFS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R+ KL +GGIK+MN IPDAIF+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+ P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|441506202|ref|ZP_20988178.1| SSU ribosomal protein S2p (SAe) [Photobacterium sp. AK15]
gi|441426150|gb|ELR63636.1| SSU ribosomal protein S2p (SAe) [Photobacterium sp. AK15]
Length = 242
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/240 (49%), Positives = 166/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ I ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEINKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+ K
Sbjct: 69 FVGTKRAASESIKESAVNCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +SI LYT + A TV E R++ + E + +EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRSIQLYTNAV------AATVTEGRNQDIVAQAE-QDGFVEA 241
>gi|82702131|ref|YP_411697.1| glutathione S-transferase-like protein [Nitrosospira multiformis
ATCC 25196]
gi|82410196|gb|ABB74305.1| Glutathione S-transferase-like protein [Nitrosospira multiformis
ATCC 25196]
Length = 199
Score = 247 bits (631), Expect = 2e-62, Method: Composition-based stats.
Identities = 110/178 (61%), Positives = 146/178 (82%), Gaps = 4/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF+I D+DL N+P+++ M+PYG+VP+LVERDL+LYESNIINEYID+RFP+PQLM +DP
Sbjct: 25 MDFQIIDVDLHNRPEDLAVMSPYGRVPVLVERDLVLYESNIINEYIDDRFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE+E+F HL +E+ K + ++AR IRD L +AP+F K K+M
Sbjct: 85 VMRARARLFLHRFEQELFCHLEAVEHGNQKAA----EKARATIRDNLTLIAPVFAKQKHM 140
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI L K A+PL+K+AER+FSRP+++++LT +EK M+
Sbjct: 141 LGDEFSMLDVAIAPLLWRLDHYGIQLPKQAAPLLKFAERLFSRPAFIDALTASEKAMR 198
>gi|152995301|ref|YP_001340136.1| 30S ribosomal protein S2 [Marinomonas sp. MWYL1]
gi|189044943|sp|A6VUS2.1|RS2_MARMS RecName: Full=30S ribosomal protein S2
gi|150836225|gb|ABR70201.1| ribosomal protein S2 [Marinomonas sp. MWYL1]
Length = 244
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 163/236 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ G HFGHQTR+WNPKM +IFG RNKIHIINLE T+ A+ + ++ +K +L
Sbjct: 9 LLLVGSHFGHQTRYWNPKMKPFIFGARNKIHIINLEHTVPALNNALELVKKMAENKNKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I +A R+GMP+++ RWLGG+LTN+KTI+ SI+RL+E++ +++G+ K
Sbjct: 69 FVGTKRAASKTIKEQAARSGMPYVNHRWLGGMLTNYKTIRASIKRLRELETQMSDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PD +F++DV + + A+ EA KL IP+IG+VD
Sbjct: 129 LTKKEALMRTRELEKLELSMGGIKDMGGLPDVLFVVDVDHERIAIKEANKLGIPVIGIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKA 411
TN +PDG++Y+IP NDD+ +++ LY DA L+ + + + E +A
Sbjct: 189 TNSNPDGVDYIIPANDDAIRAVQLYVGAFADAVLEGRNATAGTADEFVEVSEATEA 244
>gi|392551132|ref|ZP_10298269.1| 30S ribosomal protein S2 [Pseudoalteromonas spongiae UST010723-006]
Length = 242
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 160/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLEKT+ ++ +A+ ++ + +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPLFNEAMSFLKGVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+R+ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAALRSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDAIF+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIKEANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++++IPGNDD+ ++I LYT + D ++ +
Sbjct: 189 TNSNPDGVDFIIPGNDDAIRAIQLYTNAVADVAVEGR 225
>gi|365540547|ref|ZP_09365722.1| 30S ribosomal protein S2 [Vibrio ordalii ATCC 33509]
Length = 243
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 170/240 (70%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG R+ +HIINLEKT+ M+ +A+ ++++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARSSVHIINLEKTVPMFNEALAELHKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNWKTVRQSIKRLKELEIQATDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ ++I LY + A+TV E R+K A + K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLNAV------AETVNEGRNKDAAALAAAKDGFVEA 242
>gi|221133314|ref|ZP_03559619.1| ribosomal protein S2 [Glaciecola sp. HTCC2999]
Length = 242
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 156/217 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ Y+ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYVSSVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A++ ++++RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAVKEAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL +GGIK+M +PD IF+ID + AV+EA L IP++GVVD
Sbjct: 129 LTKKEVLMLQREMTKLESSLGGIKDMGGLPDVIFVIDADHEHIAVTEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ ++I LY DA + +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVISGR 225
>gi|90413529|ref|ZP_01221520.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK]
gi|90325461|gb|EAS41944.1| 30S ribosomal protein S2 [Photobacterium profundum 3TCK]
Length = 242
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 167/240 (69%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ I ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEINKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ +++ RWLGG+LTN+KT++ SI+RLKE+++ +G+ K
Sbjct: 69 FVGTKRAASESIKESAINCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQSADGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLGIPVFSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +SI LYT + A+TV E R++ + E + EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRSIQLYTGAV------AQTVTEARNQDIVVQAEQDGFVAEA 242
>gi|392548406|ref|ZP_10295543.1| 30S ribosomal protein S2 [Pseudoalteromonas rubra ATCC 29570]
Length = 242
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 159/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RNK+HIINLEKT+ M+ A++++ + +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALKFLSNVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDAIFIID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMKTREMEKLEKSLGGIKDMGGLPDAIFIIDADHEHIAIREANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYTGAVATAITEGR 225
>gi|343509229|ref|ZP_08746514.1| 30S ribosomal protein S2 [Vibrio scophthalmi LMG 19158]
gi|343513797|ref|ZP_08750892.1| 30S ribosomal protein S2 [Vibrio sp. N418]
gi|342801416|gb|EGU36882.1| 30S ribosomal protein S2 [Vibrio sp. N418]
gi|342805296|gb|EGU40572.1| 30S ribosomal protein S2 [Vibrio scophthalmi LMG 19158]
Length = 242
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY + A +V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVKLYLDAV------ATSVNEGRNKDVAVVAE-KDGFVEA 241
>gi|262379486|ref|ZP_06072642.1| ribosomal protein S2 [Acinetobacter radioresistens SH164]
gi|421857778|ref|ZP_16290099.1| 30S ribosomal protein S2 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|262298943|gb|EEY86856.1| ribosomal protein S2 [Acinetobacter radioresistens SH164]
gi|403186787|dbj|GAB76300.1| 30S ribosomal protein S2 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 248
Score = 246 bits (629), Expect = 4e-62, Method: Composition-based stats.
Identities = 116/232 (50%), Positives = 158/232 (68%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AG HFGHQTRFWNPKM YIFG RNKIHIINLE T+ A+ + QL K +L
Sbjct: 11 LLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+F+IDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PD ++YVIPGNDD+ +++ LY + DA + K + ++ A E
Sbjct: 191 TNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKAEE 242
>gi|336123500|ref|YP_004565548.1| 30S ribosomal protein S2P [Vibrio anguillarum 775]
gi|335341223|gb|AEH32506.1| SSU ribosomal protein S2P [Vibrio anguillarum 775]
Length = 243
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 170/240 (70%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG R+++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARSRVHIINLEKTVPMFNEALAELQKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNWKTVRQSIKRLKELEIQATDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAVKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ ++I LY + A+TV E R+K A + K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLNAV------AETVNEGRNKDAAALAAAKDGFVEA 242
>gi|37199490|dbj|BAC95321.1| ribosomal protein S2 [Vibrio vulnificus YJ016]
Length = 253
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 176/257 (68%), Gaps = 11/257 (4%)
Query: 163 RPSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+
Sbjct: 3 RPNPIEDFKMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
+A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 EALAELVKVGEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLKE+++ T+G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID +
Sbjct: 123 KRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
A+ EA L IP+ VVDTN +PDG++Y+IPGNDD+ +++ LY A ++ E R
Sbjct: 183 AIKEANNLGIPVFAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ASSLTEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + E K +EA
Sbjct: 237 NKDVAAVAE-KDGFVEA 252
>gi|445423899|ref|ZP_21436806.1| ribosomal protein S2 [Acinetobacter sp. WC-743]
gi|444755220|gb|ELW79812.1| ribosomal protein S2 [Acinetobacter sp. WC-743]
Length = 250
Score = 246 bits (629), Expect = 4e-62, Method: Composition-based stats.
Identities = 114/228 (50%), Positives = 158/228 (69%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAG HFGHQTRFWNPKM YIFG RN+IHIINLE T+ A+ ++ L K +L
Sbjct: 11 LLQAGAHFGHQTRFWNPKMRQYIFGARNRIHIINLEHTVPALNDALNFVNNLASKKNKVL 70
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A +I +A RAG P++D RWLGG+LTN+KT++ SI RLK++ +G+ K
Sbjct: 71 FVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAK 130
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GG+KNM +PDA+FIIDV + A+ EA L IP+IG+VD
Sbjct: 131 LTKREALERTREMEKLERSLGGVKNMGGLPDALFIIDVDHEAIAIKEAKNLGIPVIGIVD 190
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN +PD +++VIPGNDD+ +++ LY + DA + K + ++ A
Sbjct: 191 TNSNPDNVDFVIPGNDDAIRAVTLYASAMADAIIAGKEYAQTQANAQA 238
>gi|424793697|ref|ZP_18219774.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796437|gb|EKU24943.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 265
Score = 246 bits (628), Expect = 4e-62, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 156/218 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ R W+P M+ YIFG R KIHIINLEKT+ ++ A+ +I + +GT+
Sbjct: 8 QMLEAGVHFGHQCRHWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LF+GTKR AR + EA R G PF+ QRWLGG LTNF+T+K S+ RLKE++ T+G+
Sbjct: 68 LFLGTKRSARDSVKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL K E L R++ KL +GGIK MN +PDA+F+ID+G+ A+ EA KL IP++ VV
Sbjct: 128 KLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN++P ++Y IPGNDD+ +++ LY + DA L+ K
Sbjct: 188 DTNYNPALVDYAIPGNDDAIRAVQLYARAAADAVLEGK 225
>gi|59712569|ref|YP_205345.1| 30S ribosomal protein S2 [Vibrio fischeri ES114]
gi|197336329|ref|YP_002156790.1| 30S ribosomal protein S2 [Vibrio fischeri MJ11]
gi|423686742|ref|ZP_17661550.1| 30S ribosomal protein S2 [Vibrio fischeri SR5]
gi|75506956|sp|Q5E3D9.1|RS2_VIBF1 RecName: Full=30S ribosomal protein S2
gi|238690250|sp|B5F9X6.1|RS2_VIBFM RecName: Full=30S ribosomal protein S2
gi|59480670|gb|AAW86457.1| 30S ribosomal subunit protein S2 [Vibrio fischeri ES114]
gi|197317819|gb|ACH67266.1| ribosomal protein S2 [Vibrio fischeri MJ11]
gi|371494810|gb|EHN70408.1| 30S ribosomal protein S2 [Vibrio fischeri SR5]
Length = 242
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 167/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLE+T+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNEALAELAKIGSKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLK+ ++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAINSDQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEVQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL + +GGIKNMN +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTRDMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ ++I LY DA V R++ +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLNAAADA------VKSGRNQDVAAVAE-KDGFVEA 241
>gi|161486610|ref|NP_935350.2| 30S ribosomal protein S2 [Vibrio vulnificus YJ016]
gi|161501817|ref|NP_760735.2| 30S ribosomal protein S2 [Vibrio vulnificus CMCP6]
gi|320155592|ref|YP_004187971.1| 30S ribosomal protein S2p [Vibrio vulnificus MO6-24/O]
gi|31340388|sp|Q8DBG1.2|RS2_VIBVU RecName: Full=30S ribosomal protein S2
gi|56749445|sp|Q7MIG0.2|RS2_VIBVY RecName: Full=30S ribosomal protein S2
gi|319930904|gb|ADV85768.1| SSU ribosomal protein S2p (SAe) [Vibrio vulnificus MO6-24/O]
gi|319999275|gb|AAO10262.2| ribosomal protein S2 [Vibrio vulnificus CMCP6]
Length = 242
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 170/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELVKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY A ++ E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ASSLTEGRNKDVAAVAE-KDGFVEA 241
>gi|217969826|ref|YP_002355060.1| glutathione S-transferase [Thauera sp. MZ1T]
gi|217507153|gb|ACK54164.1| Glutathione S-transferase domain protein [Thauera sp. MZ1T]
Length = 198
Score = 246 bits (628), Expect = 4e-62, Method: Composition-based stats.
Identities = 111/178 (62%), Positives = 144/178 (80%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+ D+DL+NKP++I +NPY +VP+LV+RDL+LYE+NIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEVIDVDLYNKPEDIAVINPYNRVPVLVDRDLVLYEANIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L FE+E+F HL LE + KG + R +RD L LAP+F K KYM
Sbjct: 85 IMRARARQLLHTFEQELFTHLEALEAAQ-----KGVDKVRAHVRDHLTQLAPVFTKQKYM 139
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRL++YGI L K+A+PL+KYAERIFSR ++++LTP+EK+M+
Sbjct: 140 LGEEFSMLDVAIAPLLWRLEHYGIELPKAAAPLMKYAERIFSRQGFIDALTPSEKVMR 197
>gi|343505421|ref|ZP_08742993.1| 30S ribosomal protein S2 [Vibrio ichthyoenteri ATCC 700023]
gi|342807719|gb|EGU42899.1| 30S ribosomal protein S2 [Vibrio ichthyoenteri ATCC 700023]
Length = 242
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY + A +V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVKLYLDAV------ATSVNEGRNKDVAVVAE-KDGFVEA 241
>gi|255020969|ref|ZP_05293024.1| Uridylate kinase [Acidithiobacillus caldus ATCC 51756]
gi|340781585|ref|YP_004748192.1| Uridylate kinase [Acidithiobacillus caldus SM-1]
gi|254969574|gb|EET27081.1| Uridylate kinase [Acidithiobacillus caldus ATCC 51756]
gi|340555738|gb|AEK57492.1| Uridylate kinase [Acidithiobacillus caldus SM-1]
Length = 242
Score = 246 bits (627), Expect = 6e-62, Method: Composition-based stats.
Identities = 117/233 (50%), Positives = 168/233 (72%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS +LK GEALM Y ++ S+++ + +EI + G+++A+VIGGGNI RG++
Sbjct: 7 YSRILLKLS--GEALMGEGQYGVDRSVVQRMAAEIKSVADAGVQVALVIGGGNIFRGMAK 64
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+ +DR+TADYMGMLAT++N+LA+ D L G+ + V SA+ IE+ E YI AI++L
Sbjct: 65 AAEGMDRATADYMGMLATVMNALAVQDALEHLGLPTRVQSALHIEQVAEPYIRRRAIRHL 124
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VVIF G GNPFFTTDT A+LRA EI AE++LK TKVDG+Y DP A+ Y++
Sbjct: 125 EKGRVVIFGAGTGNPFFTTDTAASLRAVEINAELVLKGTKVDGVYTDDPVTHPEAMRYRE 184
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TF++V+ + L++MD+TA + CRD +PI VFS+ K GAL RV++G+ EGTLV
Sbjct: 185 LTFNQVLEQGLQVMDATAITLCRDNDMPIVVFSMNKPGALMRVLQGEEEGTLV 237
>gi|258627350|ref|ZP_05722134.1| 30S ribosomal protein S2 [Vibrio mimicus VM603]
gi|258580388|gb|EEW05353.1| 30S ribosomal protein S2 [Vibrio mimicus VM603]
Length = 268
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 178/261 (68%), Gaps = 11/261 (4%)
Query: 159 RIFSRPSYMESLTPAE----KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTL 214
R RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RN+++IINLEKT+
Sbjct: 14 RGMWRPNPIEDFKMASVSMRDMLKAGVHFGHQTRYWNPKMKQFIFGARNRVYIINLEKTV 73
Query: 215 YMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTI 274
M+ +A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT+
Sbjct: 74 PMFNEALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTV 133
Query: 275 KTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVG 334
+ SI+RLKE+++ T+G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID
Sbjct: 134 RQSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDAD 193
Query: 335 YHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
+ A+ EA L IP+ VVDTN SPDG++Y+IPGNDD+ +++ LY + +A +
Sbjct: 194 HEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEA------I 247
Query: 395 GELRSKTLAPIMECKKALIEA 415
E R+K +A + E K +EA
Sbjct: 248 NEGRNKDVAVVAE-KDGFVEA 267
>gi|348029862|ref|YP_004872548.1| 30S ribosomal protein S2 [Glaciecola nitratireducens FR1064]
gi|347947205|gb|AEP30555.1| ribosomal protein S2 [Glaciecola nitratireducens FR1064]
Length = 244
Score = 245 bits (626), Expect = 7e-62, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 162/217 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM+ YIFG RN++HIINLEKT+ ++ +A+ Y+ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMAQYIFGARNRVHIINLEKTVPLFNEALSYLSGVSHKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A ++G ++++RWLGG+LTN+KT++ SI+RLK++++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAEKSGQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEVQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R+ KL +GGIKNM +PD IF+ID + AV+EA L IP++GVVD
Sbjct: 129 ITKKEVLMLKREMTKLEGSLGGIKNMGGLPDVIFVIDADHEHIAVTEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LYT DA + +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVNLYTSAAADAINEGR 225
>gi|54310084|ref|YP_131104.1| 30S ribosomal protein S2 [Photobacterium profundum SS9]
gi|61215567|sp|Q6LN24.1|RS2_PHOPR RecName: Full=30S ribosomal protein S2
gi|46914523|emb|CAG21302.1| putative 30S ribosomal protein S2 [Photobacterium profundum SS9]
Length = 242
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 166/240 (69%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ I ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEINKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ +++ RWLGG+LTN+KT++ SI+RLKE+++ +G+ K
Sbjct: 69 FVGTKRAASESVKESAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKELEIQSADGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +SI LYT + A+TV E R++ + E + EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRSIQLYTGAV------AQTVTEARNQDIVVQAEQDGFVAEA 242
>gi|261344736|ref|ZP_05972380.1| ribosomal protein S2 [Providencia rustigianii DSM 4541]
gi|282567178|gb|EFB72713.1| ribosomal protein S2 [Providencia rustigianii DSM 4541]
Length = 241
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 169/240 (70%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ +KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELVKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A TV E RS+ LA ++ +++L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLGAV------ANTVREGRSQDLA--VQAEESLVEA 240
>gi|404379744|ref|ZP_10984797.1| hypothetical protein HMPREF9021_01334 [Simonsiella muelleri ATCC
29453]
gi|294483041|gb|EFG30728.1| hypothetical protein HMPREF9021_01334 [Simonsiella muelleri ATCC
29453]
Length = 201
Score = 245 bits (626), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+DID+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDIDVFNKPEDLALMNPYNQVPVLVERDLILFESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F+H+ LEN S K + +ARE I + L +AP F KNKY+
Sbjct: 85 VMRGRGRLVLHRLEKELFVHVQTLEN--TAASAKEHSKAREAIANGLTMIAPAFTKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSM+DV +APLLWRLD+Y I LSK+A+P++K AERIF R +++++LTPAEK M+
Sbjct: 143 LGDEFSMIDVALAPLLWRLDHYDIKLSKAATPILKSAERIFQRQAFIDALTPAEKAMR 200
>gi|296112503|ref|YP_003626441.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4]
gi|416155430|ref|ZP_11603915.1| 30S ribosomal protein S2 [Moraxella catarrhalis 101P30B1]
gi|416216636|ref|ZP_11623865.1| 30S ribosomal protein S2 [Moraxella catarrhalis 7169]
gi|416220474|ref|ZP_11625452.1| 30S ribosomal protein S2 [Moraxella catarrhalis 103P14B1]
gi|416228183|ref|ZP_11627484.1| 30S ribosomal protein S2 [Moraxella catarrhalis 46P47B1]
gi|416234951|ref|ZP_11629970.1| 30S ribosomal protein S2 [Moraxella catarrhalis 12P80B1]
gi|416237283|ref|ZP_11630797.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC1]
gi|416244303|ref|ZP_11634365.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC7]
gi|416246041|ref|ZP_11634931.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC8]
gi|416251283|ref|ZP_11637637.1| 30S ribosomal protein S2 [Moraxella catarrhalis CO72]
gi|416253666|ref|ZP_11638389.1| 30S ribosomal protein S2 [Moraxella catarrhalis O35E]
gi|421779318|ref|ZP_16215812.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4]
gi|295920197|gb|ADG60548.1| 30S ribosomal protein S2 [Moraxella catarrhalis BBH18]
gi|326561540|gb|EGE11883.1| 30S ribosomal protein S2 [Moraxella catarrhalis 7169]
gi|326564121|gb|EGE14359.1| 30S ribosomal protein S2 [Moraxella catarrhalis 46P47B1]
gi|326564822|gb|EGE15030.1| 30S ribosomal protein S2 [Moraxella catarrhalis 12P80B1]
gi|326566502|gb|EGE16649.1| 30S ribosomal protein S2 [Moraxella catarrhalis 103P14B1]
gi|326568010|gb|EGE18102.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC7]
gi|326570687|gb|EGE20721.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC1]
gi|326571243|gb|EGE21266.1| 30S ribosomal protein S2 [Moraxella catarrhalis BC8]
gi|326573075|gb|EGE23048.1| 30S ribosomal protein S2 [Moraxella catarrhalis CO72]
gi|326577227|gb|EGE27120.1| 30S ribosomal protein S2 [Moraxella catarrhalis 101P30B1]
gi|326577806|gb|EGE27675.1| 30S ribosomal protein S2 [Moraxella catarrhalis O35E]
gi|407813759|gb|EKF84539.1| 30S ribosomal protein S2 [Moraxella catarrhalis RH4]
Length = 271
Score = 245 bits (625), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/217 (51%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AG HFGHQTRFWNPKMS YIFG RN+IHIINLE T+ + +A+ ++ + ++ +L
Sbjct: 14 LLEAGAHFGHQTRFWNPKMSQYIFGARNRIHIINLEHTVKQFNEALTFVNKQAAARNKIL 73
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A VI +A RAGMP++D RWLGG+LTN+KT++ SI RLKE++ +G+ K
Sbjct: 74 FVGTKRAAGAVIREQAQRAGMPYVDHRWLGGMLTNWKTLRQSITRLKELEKQAEDGTFAK 133
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+K+EAL R+ KL R +GGIK M +PDA+F++DV + A+ EA L IP+IG+VD
Sbjct: 134 LTKREALERTRQMEKLERALGGIKEMGGLPDALFVVDVDHEAIAIKEAKNLGIPVIGIVD 193
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PD ++YVI NDD+ ++I+LY + DA + K
Sbjct: 194 TNSNPDNVDYVIAANDDAIRAISLYVTAMADAIIAGK 230
>gi|347754101|ref|YP_004861665.1| 30S ribosomal protein S2P [Candidatus Chloracidobacterium
thermophilum B]
gi|347586619|gb|AEP11149.1| SSU ribosomal protein S2P [Candidatus Chloracidobacterium
thermophilum B]
Length = 262
Score = 245 bits (625), Expect = 1e-61, Method: Composition-based stats.
Identities = 111/222 (50%), Positives = 164/222 (73%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQ R WNPKM YIFG RN I+II+L+KT + +A+R+I Q GT
Sbjct: 2 KELLEAGVHFGHQVRRWNPKMKEYIFGERNGIYIIDLQKTQRLLREAVRFIAQTAAEGGT 61
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ IA EA R GMP+++QRWLGGLLTNF+TI+ S++R++E+++ T+G
Sbjct: 62 VLFVGTKRQAQDAIAEEATRCGMPYVNQRWLGGLLTNFQTIQRSMKRMRELEVMRTDGHY 121
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+ L+KKE L ++ +L R GI+ MN +P A+F+ID + A++EA +L IP++ +
Sbjct: 122 QSLTKKEILRIEKEYARLERNFSGIRTMNRLPKALFVIDTKKEEIAIAEANRLGIPVVAL 181
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVG 395
VDTN SP G++YVIPGNDD+ +S+ L + I DA ++ +T+G
Sbjct: 182 VDTNCSPLGVDYVIPGNDDALRSVRLISAKIADAVIEGRTMG 223
>gi|269217145|ref|ZP_06160999.1| UMP kinase [Slackia exigua ATCC 700122]
gi|402828352|ref|ZP_10877243.1| UMP kinase [Slackia sp. CM382]
gi|269129282|gb|EEZ60367.1| UMP kinase [Slackia exigua ATCC 700122]
gi|402286953|gb|EJU35415.1| UMP kinase [Slackia sp. CM382]
Length = 238
Score = 245 bits (625), Expect = 1e-61, Method: Composition-based stats.
Identities = 114/223 (51%), Positives = 166/223 (74%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I ++ EI E+V G+++AIV+GGGNI RG++ +DR+ AD
Sbjct: 16 GEALMGDAGYGIDPKVIDSLAVEIKEVVDDGVQVAIVVGGGNIFRGVAGSANGMDRAQAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N+LAL D L ++G++S V SAI + + E+YI L AI+++E+G+VVIFA G
Sbjct: 76 YIGMLATVMNALALQDGLERAGVVSRVQSAIEMHQVAETYIRLRAIRHMEKGRVVIFAAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDTTAALRA EI A+ ++KATKVDGIY+SDP K A Y+KI++ +V++K+L
Sbjct: 136 TGNPYFTTDTTAALRACEIDADCMMKATKVDGIYDSDPAKNPDAARYEKISYLDVLTKEL 195
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+MD+ A S C+D +P+ VF++ G ++R ++G N GTLVY
Sbjct: 196 NVMDAAAISLCKDNDMPLLVFNLTAPGNIRRALKGDNVGTLVY 238
>gi|422023722|ref|ZP_16370224.1| 30S ribosomal protein S2 [Providencia sneebia DSM 19967]
gi|414091737|gb|EKT53418.1| 30S ribosomal protein S2 [Providencia sneebia DSM 19967]
Length = 241
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI+YVIPGNDD+ ++I LY + A TV E RS+ LA ++ +++L+EA
Sbjct: 189 TNSDPDGIDYVIPGNDDAIRAIKLYLGAV------AATVREGRSQDLA--VQAEESLVEA 240
>gi|291519560|emb|CBK74781.1| SSU ribosomal protein S2P [Butyrivibrio fibrisolvens 16/4]
Length = 242
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 162/229 (70%), Gaps = 1/229 (0%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM+ YI+ RN IHII+L+K++ M + A I+ +
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIHIIDLQKSVGMVDDAYDVIFDIA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G +LFVGTK+QA+ IA+EA R GM ++++RWLGG+LTNFKT++T I RLKE++
Sbjct: 62 QQGGNILFVGTKKQAQDAIASEAERCGMYYVNERWLGGMLTNFKTVQTRIARLKEIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G +L KKE +L ++Q KL +V+GGIK MN IPDAIFIID V EA L I
Sbjct: 122 ADGVFEQLPKKEVILLKKEQEKLTKVLGGIKEMNRIPDAIFIIDPKKEHICVQEAHALGI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
P++GV DTN PD ++YVIPGNDD+ +++ L + DA ++AK GE+
Sbjct: 182 PLVGVCDTNCDPDELDYVIPGNDDAIRAVKLIVAKMADAVIEAKQ-GEM 229
>gi|224823828|ref|ZP_03696937.1| Glutathione S-transferase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224604283|gb|EEG10457.1| Glutathione S-transferase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 216
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 145/178 (81%), Gaps = 3/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI D+D+ NKP+++ MNPY +VP+LVERDLIL+ESNIINEYIDERFP+PQLM +DP
Sbjct: 41 MDFEIIDVDVHNKPEDLAVMNPYNEVPVLVERDLILHESNIINEYIDERFPHPQLMPADP 100
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE+E+F H+ LE + K +ARE IRD LI +AP+F K K+M
Sbjct: 101 VMRARARLFLFRFEQELFCHVKTLE---AGATGKEATKAREAIRDGLIMIAPIFAKQKFM 157
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSM+DV IAPL+WRL++Y I+L KSA+P++KYAERIF R S+++SLTP+EK M+
Sbjct: 158 LGDEFSMIDVAIAPLMWRLEHYNIDLGKSAAPILKYAERIFQRQSFIDSLTPSEKAMR 215
>gi|410860611|ref|YP_006975845.1| 30S ribosomal protein S2 [Alteromonas macleodii AltDE1]
gi|410817873|gb|AFV84490.1| 30S ribosomal protein S2 [Alteromonas macleodii AltDE1]
Length = 243
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 157/212 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ Y+ + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A++ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQAQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDAIF+ID + AV+EA L IP++GVVD
Sbjct: 129 LTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG++Y+IPGNDD+ ++I LY +A
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLDAAANA 220
>gi|165918978|ref|ZP_02219064.1| ribosomal protein S2 [Coxiella burnetii Q321]
gi|165917303|gb|EDR35907.1| ribosomal protein S2 [Coxiella burnetii Q321]
Length = 313
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YI+G R KIHIINLE+TL + A++++ ++ +G +
Sbjct: 8 QLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASKRGKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK AR ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N
Sbjct: 68 LFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLENEENL 127
Query: 295 -KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L R++ KL+ + GIKNM +PD +F+IDV Y + AV EA +L I ++G+
Sbjct: 128 VGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEYERNAVQEANRLGITVLGI 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
VDTN SPD I++VIPGNDD+ ++I LY K I D +DA++V EL+
Sbjct: 188 VDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARSVLELQ 232
>gi|222054620|ref|YP_002536982.1| 30S ribosomal protein S2 [Geobacter daltonii FRC-32]
gi|254764478|sp|B9M5C6.1|RS2_GEOSF RecName: Full=30S ribosomal protein S2
gi|221563909|gb|ACM19881.1| ribosomal protein S2 [Geobacter daltonii FRC-32]
Length = 255
Score = 244 bits (624), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/250 (46%), Positives = 172/250 (68%), Gaps = 4/250 (1%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++++ + T+
Sbjct: 8 ELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKSAYNFVFEAAQAGETM 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ +A EA R GM F++ RWLGG+LTNF T+K SI+RLK +D +G+I
Sbjct: 68 LFVGTKKQAQDSVAEEAQRCGMFFVNDRWLGGMLTNFSTVKQSIERLKRIDAMFADGTIE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+KKEAL ++++KL + +GGIK MN +P +F+ID + AVSEA KL IP++ +V
Sbjct: 128 AYTKKEALQMEKERVKLEKTLGGIKGMNKLPGLLFVIDPKNEEIAVSEAKKLGIPVVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKK-ALI 413
DTN PD I+YVIPGNDD+ ++I L T + DA ++ G+ R+ L E + A
Sbjct: 188 DTNCDPDNIDYVIPGNDDAIRAIRLLTSKVADAMIEG---GQARNTQLQTDTEGAEFAAG 244
Query: 414 EANGKLSKAE 423
E G+ + AE
Sbjct: 245 EETGEGTVAE 254
>gi|226697647|sp|B8CQ85.1|RS2_SHEPW RecName: Full=30S ribosomal protein S2
gi|212557761|gb|ACJ30215.1| Ribosomal protein S2 [Shewanella piezotolerans WP3]
Length = 242
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 152/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSIDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN SPDGINY+IPGNDD+ +SI LYT+ + A
Sbjct: 189 TNSSPDGINYIIPGNDDAMRSIRLYTESVATA 220
>gi|406595861|ref|YP_006746991.1| 30S ribosomal protein S2 [Alteromonas macleodii ATCC 27126]
gi|407682812|ref|YP_006797986.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'English
Channel 673']
gi|407686727|ref|YP_006801900.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407699167|ref|YP_006823954.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Black Sea
11']
gi|406373182|gb|AFS36437.1| 30S ribosomal protein S2 [Alteromonas macleodii ATCC 27126]
gi|407244423|gb|AFT73609.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'English
Channel 673']
gi|407248314|gb|AFT77499.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Black Sea
11']
gi|407290107|gb|AFT94419.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 243
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 157/212 (74%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ Y+ + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A++ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDAIF+ID + AV+EA L IP++GVVD
Sbjct: 129 LTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEARNLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG++Y+IPGNDD+ ++I LY +A
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAIQLYLDAAANA 220
>gi|384084927|ref|ZP_09996102.1| uridylate kinase [Acidithiobacillus thiooxidans ATCC 19377]
Length = 241
Score = 244 bits (623), Expect = 2e-61, Method: Composition-based stats.
Identities = 118/233 (50%), Positives = 169/233 (72%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS +LK GEALM Y ++ +++ + EI ++VS G+++AIVIGGGNI RG++
Sbjct: 6 YSRVLLKLS--GEALMGDGQYGVDREVVRRMAREIKDVVSSGVQVAIVIGGGNIFRGMAK 63
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+ +DR+TADYMGMLAT++N+LA+ D L G+ + V+SA+ IE+ E YI AI++L
Sbjct: 64 AAEGMDRATADYMGMLATVMNALAVQDALEHLGLPTRVLSALHIEQVAEPYIRRRAIRHL 123
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VVIF G GNPFFTTDT A+LRA EI AE++LK TKVDG+Y DP A+ Y++
Sbjct: 124 EKGRVVIFGAGTGNPFFTTDTAASLRAVEINAELVLKGTKVDGVYTDDPVTHPEAMRYRE 183
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+++++V+ + L++MD+TA + CRD +PI VFSI KSGAL RV+ G+ EGT V
Sbjct: 184 LSYNQVLEQNLQVMDATAITLCRDNDMPIIVFSINKSGALMRVMLGEEEGTSV 236
>gi|119897254|ref|YP_932467.1| stringent starvation protein A [Azoarcus sp. BH72]
gi|119669667|emb|CAL93580.1| probable stringent starvation protein A [Azoarcus sp. BH72]
Length = 198
Score = 244 bits (623), Expect = 2e-61, Method: Composition-based stats.
Identities = 110/178 (61%), Positives = 144/178 (80%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+ D+DL+NKP++I +NPY +VP+LV+RDL+LYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEVIDVDLYNKPEDIAVINPYNRVPVLVDRDLVLYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L FE E+F H+ LE + KG + R +RD L+ LAP+F K K+M
Sbjct: 85 IMRARARQLLHTFEHELFSHIEALEANQ-----KGVDKTRAHVRDHLVQLAPIFTKQKFM 139
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRL++YGI L K+A+PL+KYAERIFSR ++++LTP+EK+M+
Sbjct: 140 LGEEFSMLDVAIAPLLWRLEHYGIELPKTAAPLMKYAERIFSRQGFIDALTPSEKVMR 197
>gi|119946597|ref|YP_944277.1| 30S ribosomal protein S2 [Psychromonas ingrahamii 37]
gi|166226744|sp|A1SYW3.1|RS2_PSYIN RecName: Full=30S ribosomal protein S2
gi|119865201|gb|ABM04678.1| SSU ribosomal protein S2P [Psychromonas ingrahamii 37]
Length = 244
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 150/205 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ ++ Q KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALDFLEQKAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ ++D RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASDAVKEAAISCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKEAL+ R+ KL++ +GGIKNM IPD IF+ID + A+ EA L IP+I +VD
Sbjct: 129 VTKKEALMLARELEKLDKTLGGIKNMGGIPDVIFVIDADHEHIAIKEANNLGIPVISIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALY 380
TN PD I+YV+PGNDD+ ++I LY
Sbjct: 189 TNSCPDNIDYVVPGNDDAIRAIKLY 213
>gi|347541269|ref|YP_004848695.1| glutathione S-transferase [Pseudogulbenkiania sp. NH8B]
gi|345644448|dbj|BAK78281.1| glutathione S-transferase domain protein [Pseudogulbenkiania sp.
NH8B]
Length = 216
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 145/178 (81%), Gaps = 3/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI D+D+ NKP+++ MNPY +VP+LVERDLIL+ESNIINEYIDERFP+PQLM +DP
Sbjct: 41 MDFEIIDVDVHNKPEDLAVMNPYNEVPVLVERDLILHESNIINEYIDERFPHPQLMPADP 100
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE+E+F H+ LE + K +ARE IRD LI +AP+F K K+M
Sbjct: 101 VMRARARLFLFRFEQELFCHVKTLE---AGATGKEATKAREAIRDGLIMIAPIFAKQKFM 157
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSM+DV IAPL+WRL++Y I+L KSA+P++KYAERIF R S+++SLTP+EK M+
Sbjct: 158 LGDEFSMIDVAIAPLMWRLEHYNIDLGKSAAPILKYAERIFQRQSFIDSLTPSEKAMR 215
>gi|170727620|ref|YP_001761646.1| 30S ribosomal protein S2 [Shewanella woodyi ATCC 51908]
gi|238688708|sp|B1KNU3.1|RS2_SHEWM RecName: Full=30S ribosomal protein S2
gi|169812967|gb|ACA87551.1| ribosomal protein S2 [Shewanella woodyi ATCC 51908]
Length = 242
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 152/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN SPDGINY++PGNDD+ +SI LYT+ + A
Sbjct: 189 TNSSPDGINYIVPGNDDAMRSIRLYTESVAAA 220
>gi|422007776|ref|ZP_16354762.1| 30S ribosomal protein S2 [Providencia rettgeri Dmel1]
gi|414097666|gb|EKT59321.1| 30S ribosomal protein S2 [Providencia rettgeri Dmel1]
Length = 241
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A TV E RS+ LA ++ +++L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLGAV------ASTVREGRSQDLA--VQAEESLVEA 240
>gi|268590532|ref|ZP_06124753.1| ribosomal protein S2 [Providencia rettgeri DSM 1131]
gi|291314118|gb|EFE54571.1| ribosomal protein S2 [Providencia rettgeri DSM 1131]
Length = 241
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A TV E RS+ LA ++ +++L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLGAV------ASTVREGRSQDLA--VQAEESLVEA 240
>gi|392307304|ref|ZP_10269838.1| 30S ribosomal protein S2 [Pseudoalteromonas citrea NCIMB 1889]
Length = 242
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLEKT+ M+ A++++ +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLQNAASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKESALQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDAIF+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKDMGGLPDAIFVIDADHEHIAIREANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++++IPGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDFIIPGNDDAIRAIQLYTGAVATAITEGR 225
>gi|381400283|ref|ZP_09925259.1| regulator of pilE expression [Kingella kingae PYKK081]
gi|380834670|gb|EIC14499.1| regulator of pilE expression [Kingella kingae PYKK081]
Length = 201
Score = 244 bits (622), Expect = 2e-61, Method: Composition-based stats.
Identities = 112/178 (62%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+DID+FNKP+++ MNPY +VP+LVERDL+LYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDIDVFNKPEDLAVMNPYNEVPVLVERDLVLYESNIINEYIDERFPHPQLMPVDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+FIH+ LEN ++ K +ARE I D L +AP F KNKY+
Sbjct: 85 VMRGRGRLVLHRLEKELFIHVKTLENP--TSTAKEQSKAREAIADGLTMIAPAFTKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV +APLLWRLD+Y I L K+A+P++K AERIF RP+++++LTPAEK M+
Sbjct: 143 LGDDFSMIDVALAPLLWRLDHYEIKLGKAAAPILKSAERIFQRPAFIDALTPAEKAMR 200
>gi|323495362|ref|ZP_08100440.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546]
gi|323310433|gb|EGA63619.1| 30S ribosomal protein S2 [Vibrio brasiliensis LMG 20546]
Length = 242
Score = 244 bits (622), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 167/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY A +V E R+K +A E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ATSVTEGRNKDVAAAAE-KDGFVEA 241
>gi|157376293|ref|YP_001474893.1| 30S ribosomal protein S2 [Shewanella sediminis HAW-EB3]
gi|189044994|sp|A8FY42.1|RS2_SHESH RecName: Full=30S ribosomal protein S2
gi|157318667|gb|ABV37765.1| ribosomal protein S2 [Shewanella sediminis HAW-EB3]
Length = 242
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 152/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKESAISCEQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN SPDGINY++PGNDD+ +SI LYT+ + A
Sbjct: 189 TNSSPDGINYIVPGNDDAMRSIRLYTQSVAAA 220
>gi|109897574|ref|YP_660829.1| 30S ribosomal protein S2 [Pseudoalteromonas atlantica T6c]
gi|123171513|sp|Q15WG3.1|RS2_PSEA6 RecName: Full=30S ribosomal protein S2
gi|109699855|gb|ABG39775.1| SSU ribosomal protein S2P [Pseudoalteromonas atlantica T6c]
Length = 243
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ YI + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGSVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + AV+ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 ITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LY DA ++ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGR 225
>gi|269960591|ref|ZP_06174963.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3]
gi|269834668|gb|EEZ88755.1| 30S ribosomal protein S2 [Vibrio harveyi 1DA3]
Length = 253
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 163 RPSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+
Sbjct: 3 RPNPIEDFKMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
+A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 EALAELAKVGEKKGKVLFVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLK+ + +G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID +
Sbjct: 123 KRLKDFEAQAQDGTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
A+ EA L IP+ VVDTN +PDG++Y+IPGNDD+ +++ LY A V E R
Sbjct: 183 AIKEANNLGIPVYAVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ASAVSEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + E K +EA
Sbjct: 237 NKDVAAVAE-KDGFVEA 252
>gi|406946257|gb|EKD77518.1| hypothetical protein ACD_42C00307G0002 [uncultured bacterium]
Length = 304
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 157/219 (71%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQ RFWNPKM+ +I+G R K+HIINLEKTL + + + I QL +G +
Sbjct: 9 QMLEAGVHFGHQKRFWNPKMAPFIYGEREKLHIINLEKTLPKFRELLETIAQLTSKRGKV 68
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNG-SI 293
L VGTK AR +I EAVR GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N ++
Sbjct: 69 LLVGTKHAAREIIKEEAVRCGMPYVDNRWLGGMLTNYKTIRQSIKRLKELEAMLLNPKAL 128
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+KKE L R++ KL + GIK+M +PD +F+IDV + K A+ EA +L IP+ +
Sbjct: 129 TGKTKKEVLTIQREKDKLAANLEGIKSMGGLPDMLFVIDVKHEKTAILEAKRLGIPVAAI 188
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN SP+ I+YV+PGNDD+ ++I Y K I D ++++
Sbjct: 189 VDTNASPEDIDYVVPGNDDAMRAIRFYCKTIADVIIESR 227
>gi|161831161|ref|YP_001597230.1| 30S ribosomal protein S2 [Coxiella burnetii RSA 331]
gi|7388167|sp|Q9X5U8.1|RS2_COXBU RecName: Full=30S ribosomal protein S2
gi|189044934|sp|A9KBR3.1|RS2_COXBN RecName: Full=30S ribosomal protein S2
gi|189044935|sp|A9N8R0.1|RS2_COXBR RecName: Full=30S ribosomal protein S2
gi|4927945|gb|AAD33342.1|AF127534_1 30S ribosomal protein S2 [Coxiella burnetii]
gi|161763028|gb|ABX78670.1| ribosomal protein S2 [Coxiella burnetii RSA 331]
Length = 313
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/225 (51%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YI+G R KIHIINLE+TL + A++++ ++ +G +
Sbjct: 8 QLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEVASKRGKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK AR ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N
Sbjct: 68 LFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLENEENL 127
Query: 295 -KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L R++ KL+ + GIKNM +PD +F+IDV + + AV EA +L I ++G+
Sbjct: 128 VGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGITVLGI 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
VDTN SPD I++VIPGNDD+ ++I LY K I D +DA++V EL+
Sbjct: 188 VDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARSVLELQ 232
>gi|56478853|ref|YP_160442.1| uridylate kinase [Aromatoleum aromaticum EbN1]
gi|81356540|sp|Q5NZH3.1|PYRH_AZOSE RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|56314896|emb|CAI09541.1| Uridylate kinase [Aromatoleum aromaticum EbN1]
Length = 238
Score = 243 bits (620), Expect = 4e-61, Method: Composition-based stats.
Identities = 122/223 (54%), Positives = 169/223 (75%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN ++ I++EI+E+ G+++ +VIGGGNI RG+ +DR+TAD
Sbjct: 15 GEALMGDDSYGINEDVVSRIVAEIAEVNRLGVQVGVVIGGGNIFRGMKGAASGMDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N++AL D ++ + + V SA+ I++ +E YI AI+++EEG+VVIFA G
Sbjct: 75 YMGMLATVMNAMALADAFRRAQVEARVQSALRIDQVVEPYIRGRAIRHMEEGRVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR +E+ A+I+LKATKVDG+Y +DP K A Y +I+FDE I + L
Sbjct: 135 TGNPFFTTDTAAALRGSEMAAQIVLKATKVDGVYTADPKKDPQAQRYHRISFDEAIGRNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++D+TAF+ CRDQKLPI VFSI K GALKRV+ G++EGTLV+
Sbjct: 195 AVLDATAFALCRDQKLPINVFSIFKPGALKRVVLGEDEGTLVH 237
>gi|257065048|ref|YP_003144720.1| uridylate kinase [Slackia heliotrinireducens DSM 20476]
gi|256792701|gb|ACV23371.1| uridylate kinase [Slackia heliotrinireducens DSM 20476]
Length = 238
Score = 243 bits (620), Expect = 4e-61, Method: Composition-based stats.
Identities = 117/235 (49%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y+ +LK GEALM + Y I+ S+I + EI E+V+ G+++AI +GGGNI RG++
Sbjct: 6 KYNRVLLKLS--GEALMGQNGYGIDPSVIDALAEEIKEVVNDGVQIAITVGGGNIFRGVA 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+DR+ ADY+GMLAT++N+LAL D L + G+ S V SAI + + E+YI L AI++
Sbjct: 64 GSANGMDRAQADYIGMLATVMNALALQDGLQRHGVESRVQSAIEMHQVAETYIRLRAIRH 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
+E+G+VVIFA G GNP+FTTDTTAALRA EI A+ ++KATKVDGIY +DP K +A+ Y
Sbjct: 124 MEKGRVVIFAAGTGNPYFTTDTTAALRACEIGADCMMKATKVDGIYTADPVKDPNAVKYD 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
K+++ EV++K+L +MD+ A S C+D K+P+ VF + G ++R ++G+N GTLVY
Sbjct: 184 KVSYLEVLTKELNVMDAAAISLCKDNKMPLLVFDLTVHGNIRRALKGENVGTLVY 238
>gi|28899092|ref|NP_798697.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839721|ref|ZP_01992388.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810]
gi|260361367|ref|ZP_05774432.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030]
gi|260876826|ref|ZP_05889181.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034]
gi|260895880|ref|ZP_05904376.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466]
gi|260900386|ref|ZP_05908781.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037]
gi|417319181|ref|ZP_12105739.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus 10329]
gi|433658392|ref|YP_007275771.1| SSU ribosomal protein S2p (SAe) [Vibrio parahaemolyticus BB22OP]
gi|31340375|sp|Q87MD8.1|RS2_VIBPA RecName: Full=30S ribosomal protein S2
gi|28807316|dbj|BAC60581.1| ribosomal protein S2 [Vibrio parahaemolyticus RIMD 2210633]
gi|149746757|gb|EDM57745.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ3810]
gi|308089355|gb|EFO39050.1| ribosomal protein S2 [Vibrio parahaemolyticus Peru-466]
gi|308091373|gb|EFO41068.1| ribosomal protein S2 [Vibrio parahaemolyticus AN-5034]
gi|308108613|gb|EFO46153.1| ribosomal protein S2 [Vibrio parahaemolyticus AQ4037]
gi|308113660|gb|EFO51200.1| ribosomal protein S2 [Vibrio parahaemolyticus K5030]
gi|328474371|gb|EGF45176.1| 30S ribosomal protein S2 [Vibrio parahaemolyticus 10329]
gi|432509080|gb|AGB10597.1| SSU ribosomal protein S2p (SAe) [Vibrio parahaemolyticus BB22OP]
Length = 242
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 168/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY A V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ASAVTEGRNKDVAVVAE-KDGFVEA 241
>gi|89098612|ref|ZP_01171494.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911]
gi|89086574|gb|EAR65693.1| 30S ribosomal protein S2 [Bacillus sp. NRRL B-14911]
Length = 233
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 165/231 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A Y+ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNYVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA+R+GM F++QRWLGG LTNF+TI+ I RLK+++
Sbjct: 62 GNGGTILFVGTKKQAQDSVKEEALRSGMYFVNQRWLGGTLTNFETIQKRITRLKDIERMS 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++Q +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVQLRKEQERLEKFLGGIKDMKTLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
PI+G+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK E+ +
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEEVTT 232
>gi|238022798|ref|ZP_04603224.1| hypothetical protein GCWU000324_02710 [Kingella oralis ATCC 51147]
gi|237866001|gb|EEP67137.1| hypothetical protein GCWU000324_02710 [Kingella oralis ATCC 51147]
Length = 201
Score = 243 bits (620), Expect = 4e-61, Method: Composition-based stats.
Identities = 111/178 (62%), Positives = 142/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+DID FNKP+++ +NPY QVP+LVERDLILYESNIINEY+DERFP+PQLM +DP
Sbjct: 25 MDFEIKDIDTFNKPEDLAVINPYNQVPVLVERDLILYESNIINEYLDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F+H+ LEN+ + K +ARE I L +AP + KNKY+
Sbjct: 85 VMRGRGRLVLFRLEKELFVHVATLENQ--AATAKEQAKAREAIAQGLTMIAPAYAKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV +APLLWRL++Y I L KSA+PL+K AERIF RP++ E+LTPAEK M+
Sbjct: 143 LGDDFSMIDVALAPLLWRLEHYDIKLGKSAAPLLKSAERIFQRPAFAEALTPAEKAMR 200
>gi|394989482|ref|ZP_10382315.1| glutathione S-transferase-like protein [Sulfuricella denitrificans
skB26]
gi|393790982|dbj|GAB71954.1| glutathione S-transferase-like protein [Sulfuricella denitrificans
skB26]
Length = 175
Score = 243 bits (620), Expect = 4e-61, Method: Composition-based stats.
Identities = 109/178 (61%), Positives = 145/178 (81%), Gaps = 4/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF+I D+D+ NKP+++ MNPY QVP+LVERDLIL+E+NIINEYIDERFP+PQLM +DP
Sbjct: 1 MDFQIIDVDIHNKPEDLAVMNPYNQVPVLVERDLILHEANIINEYIDERFPHPQLMPADP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR RARL L FE+E+F H+ +E+ K + ++AR +RD L LAPLF+K K+M
Sbjct: 61 VMRGRARLFLHRFEQELFSHVAAIEHGSQKAA----EKARAAVRDNLAQLAPLFVKQKFM 116
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAP+LWRLDYYGI++ K A+ L+KY ER+FSRP+++E+LTP+EK M+
Sbjct: 117 LGEEFSMLDVAIAPMLWRLDYYGISMPKQAAALLKYGERLFSRPAFIEALTPSEKAMR 174
>gi|332307505|ref|YP_004435356.1| 30S ribosomal protein S2 [Glaciecola sp. 4H-3-7+YE-5]
gi|410642038|ref|ZP_11352556.1| small subunit ribosomal protein S2 [Glaciecola chathamensis S18K6]
gi|410647250|ref|ZP_11357685.1| small subunit ribosomal protein S2 [Glaciecola agarilytica NO2]
gi|332174834|gb|AEE24088.1| ribosomal protein S2 [Glaciecola sp. 4H-3-7+YE-5]
gi|410133105|dbj|GAC06084.1| small subunit ribosomal protein S2 [Glaciecola agarilytica NO2]
gi|410138355|dbj|GAC10743.1| small subunit ribosomal protein S2 [Glaciecola chathamensis S18K6]
Length = 243
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 156/217 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ YI + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYISSVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A++ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASDSVREAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 ITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LY DA ++ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGR 225
>gi|84394414|ref|ZP_00993131.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01]
gi|84374947|gb|EAP91877.1| 30S ribosomal protein S2 [Vibrio splendidus 12B01]
Length = 244
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG R+K+HIINLEKT+ M+ +A+ I ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARSKVHIINLEKTVPMFNEALAEIAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDGI+++IPGNDD+ +++ LY DA + +
Sbjct: 189 TNSNPDGIDFIIPGNDDAIRAVQLYLNAAADAVKEGR 225
>gi|294140003|ref|YP_003555981.1| 30S ribosomal protein S2 [Shewanella violacea DSS12]
gi|293326472|dbj|BAJ01203.1| ribosomal protein S2 [Shewanella violacea DSS12]
Length = 242
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 153/212 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL++ +GGIKNM +PD +FII + AV EA L IP++ +VD
Sbjct: 129 LTKKEALMRTRELAKLDKSLGGIKNMGGLPDVLFIIGADHEHIAVKEANNLGIPVVAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN SPDGINY+IPGNDD+ +SI LYT+ + A
Sbjct: 189 TNSSPDGINYIIPGNDDAMRSIRLYTESVAAA 220
>gi|153207687|ref|ZP_01946334.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177']
gi|120576383|gb|EAX33007.1| ribosomal protein S2 [Coxiella burnetii 'MSU Goat Q177']
Length = 313
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/225 (51%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YI+G R KIHIINLE+TL + A++++ ++ +G +
Sbjct: 8 QLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASKRGKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK AR ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N
Sbjct: 68 LFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLENEENL 127
Query: 295 -KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L R++ KL+ + GIKNM +PD +F+IDV + + AV EA +L I ++G+
Sbjct: 128 VGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGITVLGI 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
VDTN SPD I++VIPGNDD+ ++I LY K I D +DA++V EL+
Sbjct: 188 VDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARSVLELQ 232
>gi|336450594|ref|ZP_08621041.1| ribosomal protein S2 [Idiomarina sp. A28L]
gi|336282417|gb|EGN75649.1| ribosomal protein S2 [Idiomarina sp. A28L]
Length = 247
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/230 (49%), Positives = 159/230 (69%), Gaps = 6/230 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNKIHIINLE T+ M+ KA+ ++ + G +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKIHIINLESTVPMFNKALDFLQHTASNGGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I N A+ + +++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAAAEQIKNAAIASNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMNTREMEKLEKSLGGIKNMGGLPDVIFVIDADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
TN SPDG++YVIPGNDD+ ++I Y A T+ E R K A I
Sbjct: 189 TNSSPDGVDYVIPGNDDAMRAIQCYLGAA------ATTINEGRQKNGAEI 232
>gi|410626424|ref|ZP_11337185.1| small subunit ribosomal protein S2 [Glaciecola mesophila KMM 241]
gi|410153963|dbj|GAC23954.1| small subunit ribosomal protein S2 [Glaciecola mesophila KMM 241]
Length = 243
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ YI + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGGVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + AV+ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 ITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LY DA ++ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGR 225
>gi|212710397|ref|ZP_03318525.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM
30120]
gi|422020032|ref|ZP_16366574.1| 30S ribosomal protein S2 [Providencia alcalifaciens Dmel2]
gi|212686979|gb|EEB46507.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM
30120]
gi|414102656|gb|EKT64248.1| 30S ribosomal protein S2 [Providencia alcalifaciens Dmel2]
Length = 241
Score = 243 bits (619), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A TV E RS+ LA ++ ++ L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLGAV------ANTVREGRSQDLA--VQAEENLVEA 240
>gi|410618529|ref|ZP_11329472.1| small subunit ribosomal protein S2 [Glaciecola polaris LMG 21857]
gi|410161913|dbj|GAC33610.1| small subunit ribosomal protein S2 [Glaciecola polaris LMG 21857]
Length = 243
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ A+ YI + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPLFNNALNYIGGVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A++ ++++RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASDAVRDAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 ITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y+IPGNDD+ +++ LY DA ++ +
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNTAADAVIEGR 225
>gi|34497653|ref|NP_901868.1| uridylate kinase [Chromobacterium violaceum ATCC 12472]
gi|81655681|sp|Q7NVZ2.1|PYRH_CHRVO RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|34103509|gb|AAQ59871.1| uridylate kinase [Chromobacterium violaceum ATCC 12472]
Length = 239
Score = 242 bits (618), Expect = 7e-61, Method: Composition-based stats.
Identities = 125/223 (56%), Positives = 173/223 (77%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM D+Y IN + I+ I+ +I E+V G+E+ +VIGGGNI RG++ +DR+TAD
Sbjct: 16 GEALMGDDSYGINRTTIEQIVGQIKEVVELGVEVGVVIGGGNIFRGVAPAAAGMDRATAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D + K+G+I+ V SA+++++ E Y+ A++YLEEGKVVIFA G
Sbjct: 76 YMGMMATVMNALALKDAMTKAGLIARVQSALTMQQIAEPYVRGKAMQYLEEGKVVIFAAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR E+ +I+LKATKVDG+Y DP K A+ Y+ +TFDE IS+ L
Sbjct: 136 TGNPFFTTDTAAALRGMEMNVDIMLKATKVDGVYTDDPKKNPDAVRYQSVTFDEAISRNL 195
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CRDQ L I+VFSI K+GAL+RV+ G++EGTLV+
Sbjct: 196 KVMDATAFALCRDQHLNIKVFSIFKNGALRRVVLGEDEGTLVH 238
>gi|294500911|ref|YP_003564611.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551]
gi|295706257|ref|YP_003599332.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319]
gi|384045238|ref|YP_005493255.1| 30S ribosomal protein S2 [Bacillus megaterium WSH-002]
gi|294350848|gb|ADE71177.1| 30S ribosomal protein S2 [Bacillus megaterium QM B1551]
gi|294803916|gb|ADF40982.1| 30S ribosomal protein S2 [Bacillus megaterium DSM 319]
gi|345442929|gb|AEN87946.1| 30S ribosomal protein S2 [Bacillus megaterium WSH-002]
Length = 239
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 161/224 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A +++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYKFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
GT+LFVGTK+QA+ + EA RAGM F++QRWLGG LTNF TI+ I+RLK+++
Sbjct: 62 ADGGTVLFVGTKKQAQDSVKEEAARAGMYFVNQRWLGGTLTNFSTIQKRIKRLKDIEKMQ 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++ +L + +GGIK+M +PDA+FIID + AV+EA KL+I
Sbjct: 122 EDGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKQLPDALFIIDPRKERIAVAEAKKLHI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PI+G+VDTN PD I+YVIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKVADAILEAK 225
>gi|145300061|ref|YP_001142902.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357897|ref|ZP_12960586.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166225236|sp|A4SQI2.1|RS2_AERS4 RecName: Full=30S ribosomal protein S2
gi|142852833|gb|ABO91154.1| ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688809|gb|EHI53358.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 242
Score = 242 bits (618), Expect = 7e-61, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM SYIFG R+K+HIINLEKT+ M++ A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A R +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAAGRCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F++D + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ +++ LY D L+A+
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|302389815|ref|YP_003825636.1| 30S ribosomal protein S2P [Thermosediminibacter oceani DSM 16646]
gi|302200443|gb|ADL08013.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646]
Length = 233
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 156/224 (69%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVKKMEEAYEFVKNLA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G +LFVGTK+QA+ I EA R M +++QRWLGG+LTNFKTIK I+RLKE++
Sbjct: 62 AEGGKILFVGTKKQAQESIQEEAKRCEMFYVNQRWLGGMLTNFKTIKKRIERLKELERME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
G L KKE L R++ +L + +GGIKNM +PDA+F++D K AVSEA KL I
Sbjct: 122 EEGVFNVLPKKEVLNLRREKERLEKYLGGIKNMTSLPDALFVVDPRKEKIAVSEARKLKI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PII +VDTN PD ++YVIPGNDD+ +++ L T+ I DA L+ K
Sbjct: 182 PIIAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTEKIADAVLEGK 225
>gi|183597597|ref|ZP_02959090.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827]
gi|386744341|ref|YP_006217520.1| 30S ribosomal protein S2 [Providencia stuartii MRSN 2154]
gi|188023093|gb|EDU61133.1| ribosomal protein S2 [Providencia stuartii ATCC 25827]
gi|384481034|gb|AFH94829.1| 30S ribosomal protein S2 [Providencia stuartii MRSN 2154]
Length = 241
Score = 242 bits (618), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A +V E RS+ LA ++ ++ L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLSAV------ATSVREGRSQDLA--VQAEEGLVEA 240
>gi|225023579|ref|ZP_03712771.1| hypothetical protein EIKCOROL_00438 [Eikenella corrodens ATCC
23834]
gi|224943674|gb|EEG24883.1| hypothetical protein EIKCOROL_00438 [Eikenella corrodens ATCC
23834]
Length = 201
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 141/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLSVMNPYNQVPVLVERDLILFESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H+ LE+ TS K +ARE I L LAP F KNKY+
Sbjct: 85 VMRGRGRLVLFRMEKELFSHVQKLESP--DTSAKEQAKAREAISQGLTLLAPAFSKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV IAPLLWRLD+YGI L KSA+P++KYAERIF R S++ +LT AEK M+
Sbjct: 143 LGDDFSMIDVAIAPLLWRLDHYGIKLGKSAAPILKYAERIFQRESFIAALTAAEKAMR 200
>gi|333376584|ref|ZP_08468357.1| UMP kinase [Kingella kingae ATCC 23330]
gi|381401865|ref|ZP_09926756.1| uridylate kinase [Kingella kingae PYKK081]
gi|332967738|gb|EGK06845.1| UMP kinase [Kingella kingae ATCC 23330]
gi|380833162|gb|EIC13039.1| uridylate kinase [Kingella kingae PYKK081]
Length = 238
Score = 242 bits (617), Expect = 8e-61, Method: Composition-based stats.
Identities = 124/235 (52%), Positives = 166/235 (70%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + ++ EI G+E+AIV+GGGNI RG+S
Sbjct: 5 KYKRVLLKLS--GESLMGNDPFGINRDTIMQTVRQVKEISDLGVEVAIVVGGGNIFRGVS 62
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ N+DR+TADYMGMLAT++N+LAL + L G + V SA+++++ E+Y AI+Y
Sbjct: 63 AQAGNMDRATADYMGMLATVMNALALKEALESIGAKARVQSALAMQQIAETYTRPKAIQY 122
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEE K+VIFA G GNPFFTTDT AALR AE+ +++LKAT VDGIY +DP K SA Y+
Sbjct: 123 LEENKIVIFAAGTGNPFFTTDTAAALRGAEMCCDVMLKATNVDGIYTADPKKDPSATRYQ 182
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TFDE I K L++MD+TAF+ CR++ L I VF I K GALK VI G +EGTLV+
Sbjct: 183 TVTFDEAIEKNLKVMDATAFTLCRERNLNIVVFGINKEGALKNVILGADEGTLVH 237
>gi|163750351|ref|ZP_02157591.1| 30S ribosomal protein S2 [Shewanella benthica KT99]
gi|161329841|gb|EDQ00827.1| 30S ribosomal protein S2 [Shewanella benthica KT99]
Length = 242
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 153/212 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSIDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL+R +GGIKNM +PD +F+I + AV EA L IP++ +VD
Sbjct: 129 LTKKEALMRTRELAKLDRSLGGIKNMGGLPDVLFVIGADHEHIAVKEANNLGIPVVAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDGINY+IPGNDD+ +SI LYT+ + A
Sbjct: 189 TNSNPDGINYIIPGNDDAMRSIRLYTESVAAA 220
>gi|56459953|ref|YP_155234.1| 30S ribosomal protein S2 [Idiomarina loihiensis L2TR]
gi|61215387|sp|Q5QXS0.1|RS2_IDILO RecName: Full=30S ribosomal protein S2
gi|56178963|gb|AAV81685.1| Ribosomal protein S2 [Idiomarina loihiensis L2TR]
Length = 242
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 158/219 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM YIFG RNKIHIINLEKT+ M+ A+ Y+ + +KG +L
Sbjct: 9 MLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIINLEKTVPMFNDALSYMQHVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ G +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAAAEAVKEAAINCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+ID + ++ EA L IP++ VVD
Sbjct: 129 LTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHISIKEANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN +PDG++Y++PGNDD+ +++ LY +A +A+T
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAVQLYLNTAAEAVKEARTA 227
>gi|451947678|ref|YP_007468273.1| ribosomal protein S2 [Desulfocapsa sulfexigens DSM 10523]
gi|451907026|gb|AGF78620.1| ribosomal protein S2 [Desulfocapsa sulfexigens DSM 10523]
Length = 260
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 154/221 (69%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++QAG+HFGHQTR WNPKM YI+G RN I+IINL+K+ +++ A ++ G
Sbjct: 7 KEMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIINLDKSKKLFDTASNFVVDEVSKGGN 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQAR ++ EA+R GMP++D RWLGG+LTNF+TIK SI+RLK ++ +GSI
Sbjct: 67 ILFVGTKRQARNIVKEEAIRCGMPYVDHRWLGGMLTNFQTIKNSIERLKTIESMQEDGSI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+ KKE LL ++++KL R +GGIKNM P AI +ID A++EA KL IP+I +
Sbjct: 127 NRFPKKEILLMGKERIKLERNVGGIKNMRNTPSAILVIDPKNETIAINEAKKLRIPVIAL 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
DTN PDGI+Y+IPGNDD+ +SI L I + L +
Sbjct: 187 ADTNCDPDGIDYIIPGNDDAIRSIRLICSQIAEGVLTGQAA 227
>gi|85712038|ref|ZP_01043092.1| 30S ribosomal protein S2 [Idiomarina baltica OS145]
gi|85694224|gb|EAQ32168.1| 30S ribosomal protein S2 [Idiomarina baltica OS145]
Length = 242
Score = 242 bits (617), Expect = 9e-61, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 157/218 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM +IFG RNKIHIINLEKT+ M+ A+ Y+ + +KG +L
Sbjct: 9 MLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIINLEKTVPMFNDALSYMQHVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ G +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAAAEPVKEAALNCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHIAIKEANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN PDG++YVIPGNDD+ +++ LY DA +AK+
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAVQLYLNAAADAIKEAKS 226
>gi|71282500|ref|YP_268295.1| 30S ribosomal protein S2 [Colwellia psychrerythraea 34H]
gi|123733781|sp|Q485H0.1|RS2_COLP3 RecName: Full=30S ribosomal protein S2
gi|71148240|gb|AAZ28713.1| ribosomal protein S2 [Colwellia psychrerythraea 34H]
Length = 242
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 160/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGH+TR+WNPKM +IFG R+K+HIINLE+T+ M+ +A+ ++ + KG +L
Sbjct: 9 MLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNVSSKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I + A+++ +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+
Sbjct: 69 FVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSTDGTFEA 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL++ +GGIKNM +PD +FIID + A+ EA L IP+I VVD
Sbjct: 129 LTKKEALMRTREMEKLDKSLGGIKNMGGLPDVLFIIDADHEHIAIKEANNLGIPVISVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YV+PGNDD+ +++ LY + ++ L +
Sbjct: 189 TNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSGR 225
>gi|90408934|ref|ZP_01217069.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3]
gi|90309962|gb|EAS38112.1| 30S ribosomal protein S2 [Psychromonas sp. CNPT3]
Length = 243
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ KA+ ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNKALNFLEAKAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A V+ A+ ++D RWLGG+LTN+KT++ SI+RLK++++ +G+ +
Sbjct: 69 FVGTKRAASEVVKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLEIQSKDGTFEQ 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ +KL++ +GGIKNM IPD IF++D + ++ EA L IP+I +VD
Sbjct: 129 LTKKEALMRSRELIKLDKTLGGIKNMGGIPDVIFVVDADHEHISIKEANNLGIPVIAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN PD I++V+PGNDD+ ++I LY + DA+
Sbjct: 189 TNSCPDNIDFVVPGNDDAIRAIKLYLEAAAQTINDARAT 227
>gi|33239973|ref|NP_874915.1| uridylate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81664863|sp|Q7VD61.1|PYRH_PROMA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|33237499|gb|AAP99567.1| Uridylate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 237
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 167/231 (72%), Gaps = 2/231 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS +LK GEALM Y I+ I+++I ++S++V G +LAIV+GGGNI RG+
Sbjct: 3 YSRVLLKLS--GEALMGSKPYGIDPEIVQSIAQDVSKVVQEGTQLAIVVGGGNIFRGLKG 60
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+DR+TADY+GMLAT++N++ L D L ++G+ + V +AI +++ E YI AI++L
Sbjct: 61 SSAGMDRATADYVGMLATVMNAITLQDGLERAGVETRVQTAIEMQQIAEPYIRRRAIRHL 120
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VV+F GG GNPFFTTDTT+ALRAAEI A++I KATKVDG+YN DP + AI Y+
Sbjct: 121 EKGRVVVFGGGCGNPFFTTDTTSALRAAEINADVIFKATKVDGVYNQDPKEYPEAIKYES 180
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGT 819
+TF EV+SK++ +MDSTA + C+D K+PI VF+I + G + + + G+ G+
Sbjct: 181 LTFQEVLSKEIAVMDSTAIALCKDNKIPIVVFNIFQPGNINKAVAGEKIGS 231
>gi|350572305|ref|ZP_08940609.1| stringent starvation protein A [Neisseria wadsworthii 9715]
gi|349790428|gb|EGZ44339.1| stringent starvation protein A [Neisseria wadsworthii 9715]
Length = 258
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 82 MDFEIKDVDVFNKPEDLAIMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 141
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H+++LE+ + + K +ARE I L LAP F KNKY+
Sbjct: 142 VMRGRGRLVLFRLEKELFSHVHVLEDP--EATPKEQAKAREAITSGLTVLAPAFNKNKYI 199
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSM+DV IAPLLWRL++Y I L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 200 LGDEFSMIDVAIAPLLWRLNHYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 257
>gi|34499460|ref|NP_903675.1| stringent starvation protein A [Chromobacterium violaceum ATCC
12472]
gi|34105312|gb|AAQ61667.1| stringent starvation protein A [Chromobacterium violaceum ATCC
12472]
Length = 200
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 145/178 (81%), Gaps = 3/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI D+D+ NKP+++ MNPY +VP+LVERDLIL+ESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIIDVDIHNKPEDLAVMNPYNEVPVLVERDLILHESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARARL L FE E+FIH+ LE + K +ARE IRD L T+AP+F K K+M
Sbjct: 85 VMRARARLFLYRFENELFIHVKTLE---AGATGKEATKAREAIRDGLTTIAPIFSKQKFM 141
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV IAPL+WRL++Y I+L KSA+P++KYAERIF R S+++SLTP+EK M+
Sbjct: 142 LGDDFSMIDVAIAPLMWRLEHYNIDLGKSAAPILKYAERIFQRQSFIDSLTPSEKAMR 199
>gi|372488467|ref|YP_005028032.1| glutathione S-transferase [Dechlorosoma suillum PS]
gi|359355020|gb|AEV26191.1| glutathione S-transferase [Dechlorosoma suillum PS]
Length = 198
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 146/178 (82%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF++ D+DLFNKP++I +NPY +VP+LVER+LILYE NIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFQVIDVDLFNKPEDIAVINPYNRVPVLVERELILYEPNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L E+EIF ++ LE + K +AR EIR+RL LAP+F K K+M
Sbjct: 85 IMRARARQLLSTMEREIFAYIEPLEK-----NAKTADKARTEIRNRLTELAPMFAKQKFM 139
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRLD+YGI+L K+A+PL+KYAERIFSR ++++LTP+EK+M+
Sbjct: 140 LGDEFSMLDVAIAPLLWRLDHYGIDLPKTAAPLMKYAERIFSRQGFIDALTPSEKVMR 197
>gi|422015865|ref|ZP_16362458.1| 30S ribosomal protein S2 [Providencia burhodogranariea DSM 19968]
gi|414096579|gb|EKT58236.1| 30S ribosomal protein S2 [Providencia burhodogranariea DSM 19968]
Length = 241
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/240 (47%), Positives = 168/240 (70%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI++VIPGNDD+ ++I LY + A TV E RS+ LA ++ +++L+EA
Sbjct: 189 TNSDPDGIDFVIPGNDDAIRAIKLYLGAV------ATTVREGRSQDLA--VQAEESLVEA 240
>gi|323497976|ref|ZP_08102985.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326]
gi|323317021|gb|EGA70023.1| 30S ribosomal protein S2 [Vibrio sinaloensis DSM 21326]
Length = 242
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 167/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKDLEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY A +V E R+K +A E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ATSVSEGRNKDVAVAAE-KDGFVEA 241
>gi|407793386|ref|ZP_11140420.1| 30S ribosomal protein S2 [Idiomarina xiamenensis 10-D-4]
gi|407215009|gb|EKE84850.1| 30S ribosomal protein S2 [Idiomarina xiamenensis 10-D-4]
Length = 242
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 155/219 (70%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM +IFG RN+IHIINLEKT+ M+ A+ Y+ + +KG +L
Sbjct: 9 MLKAGVHFGHQTRFWNPKMKPFIFGARNRIHIINLEKTVPMFNSALNYMQHVSSNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAAAESVKEAANNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMNTREMEKLEKSLGGIKNMGGLPDVIFVIDADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
TN +PDG++YVIPGNDD+ +++ LY +A +A+
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVNLYLGSAANAINEARNA 227
>gi|159903065|ref|YP_001550409.1| uridylate kinase [Prochlorococcus marinus str. MIT 9211]
gi|159888241|gb|ABX08455.1| uridylate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 237
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 170/233 (72%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS A++K GEALM Y I+ I+ +I ++S++V G +LAIV+GGGNI RG+
Sbjct: 3 YSRALIKIS--GEALMGEKPYGIDPEIVTSIAKDVSKVVESGTQLAIVVGGGNIFRGLKG 60
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+DR+TADY+GMLAT++N++ L D L ++G+ + V +AI +++ E YI AI++L
Sbjct: 61 SAAGMDRATADYVGMLATVMNAITLQDGLERAGVETRVQTAIEMQQIAEPYIRRRAIRHL 120
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VV+F GG GNPFFTTDTTAALRAAEI A++I KATKVDG+Y+ DP K AI YK+
Sbjct: 121 EKGRVVVFGGGCGNPFFTTDTTAALRAAEINADVIFKATKVDGVYDRDPKKFPDAIKYKE 180
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TF EV+++++ +MDSTA + C+D K+PI VF++ ++ + + + G+ G+L+
Sbjct: 181 LTFQEVLTREIAVMDSTAIALCKDNKIPIVVFNLFEAENINKAVAGEEIGSLI 233
>gi|325267097|ref|ZP_08133766.1| UMP kinase [Kingella denitrificans ATCC 33394]
gi|324981450|gb|EGC17093.1| UMP kinase [Kingella denitrificans ATCC 33394]
Length = 270
Score = 241 bits (616), Expect = 1e-60, Method: Composition-based stats.
Identities = 124/240 (51%), Positives = 167/240 (69%), Gaps = 2/240 (0%)
Query: 583 KIIEKEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNI 642
K+ +Y +LK GE+LM D + IN I +I EI G+E+AIV+GGGNI
Sbjct: 32 KMSTVQYRRVLLKLS--GESLMGKDPFGINRDTIMQTARQIKEISDLGVEIAIVVGGGNI 89
Query: 643 CRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPL 702
RG+S + ++DR+TADYMGMLAT++N+LAL D L G + V SA+++++ E+Y
Sbjct: 90 FRGVSAQAGSMDRATADYMGMLATVMNALALKDALESIGAKARVQSALAMQQIAETYTRP 149
Query: 703 NAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLS 762
AI+YLEEGK+VIFA G GNPFFTTDT AALR AE+ ++LKAT VDGIY +DP +
Sbjct: 150 KAIQYLEEGKIVIFAAGTGNPFFTTDTAAALRGAEMGCNVMLKATNVDGIYTADPRTNPN 209
Query: 763 AIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
A YK +TF E I KKL++MD+TAF+ C++Q L I VF I K AL+ V++GK+EGTLV+
Sbjct: 210 ATRYKSVTFAEAIDKKLKVMDATAFTLCQEQNLNIVVFDIHKENALRDVVQGKDEGTLVH 269
>gi|218710318|ref|YP_002417939.1| 30S ribosomal protein S2 [Vibrio splendidus LGP32]
gi|218323337|emb|CAV19514.1| ribosomal protein S2 [Vibrio splendidus LGP32]
Length = 254
Score = 241 bits (616), Expect = 1e-60, Method: Composition-based stats.
Identities = 121/257 (47%), Positives = 172/257 (66%), Gaps = 10/257 (3%)
Query: 163 RPSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+
Sbjct: 3 RPNPIEDFKMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
A+ I ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 DALAEIAKVGEKKGKVLFVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLKE++ +G+ KL+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID +
Sbjct: 123 KRLKELEAQAQDGTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
AV EA L IP+ VVDTN +PDG+++VIPGNDD+ +++ LY DA V E R
Sbjct: 183 AVKEANNLGIPVYAVVDTNSNPDGVDFVIPGNDDAIRAVQLYLNAAADA------VKEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + K +EA
Sbjct: 237 NKDVAAVAAEKDGFVEA 253
>gi|39997019|ref|NP_952970.1| 30S ribosomal protein S2 [Geobacter sulfurreducens PCA]
gi|409912448|ref|YP_006890913.1| 30S ribosomal protein S2 [Geobacter sulfurreducens KN400]
gi|61215648|sp|Q74BW1.1|RS2_GEOSL RecName: Full=30S ribosomal protein S2
gi|39983907|gb|AAR35297.1| ribosomal protein S2 [Geobacter sulfurreducens PCA]
gi|298506036|gb|ADI84759.1| ribosomal protein S2 [Geobacter sulfurreducens KN400]
Length = 251
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 157/218 (72%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ + + T
Sbjct: 7 KELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVRENAQAGET 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ I EAVR GM F++QRWLGG+LTNF T+K SI RLK +D +GSI
Sbjct: 67 MLFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRLKRLDAMFADGSI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+KKEAL +++ KL +++GGIK M +P A+F+ID A+SEA KL IP++ V
Sbjct: 127 EAYTKKEALQLEKEREKLEKILGGIKGMGKLPGALFVIDPKNETIAISEAKKLGIPVVAV 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
VDTN PD I+YVIPGNDD+ ++I L T + DA ++
Sbjct: 187 VDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIEG 224
>gi|261211378|ref|ZP_05925666.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341]
gi|262404595|ref|ZP_06081150.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586]
gi|260839333|gb|EEX65959.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC341]
gi|262349627|gb|EEY98765.1| SSU ribosomal protein S2p (SAe) [Vibrio sp. RC586]
Length = 241
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY A ++ E R+K ++ K +EA
Sbjct: 189 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AASINEGRNKD--AVVAEKDGFVEA 240
>gi|257091962|ref|YP_003165603.1| glutathione S-transferase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044486|gb|ACV33674.1| Glutathione S-transferase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 198
Score = 241 bits (615), Expect = 1e-60, Method: Composition-based stats.
Identities = 112/178 (62%), Positives = 147/178 (82%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF++ D+DLF KP++I +NPYG+VP+LVERDLILYE NIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFQVIDVDLFAKPEDIAIINPYGRVPVLVERDLILYEPNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L+ E+E+F ++ L ERN K +AR++IRDRL +AP+F+K K+M
Sbjct: 85 IMRARARQLLITMEREVFAYIEPL--ERNS---KTADKARQQIRDRLTEMAPVFVKQKHM 139
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI LS+ A+PL+KY ERIFSR ++++LTP+EK M+
Sbjct: 140 LGEEFSMLDVAIAPLLWRLDHYGIELSRLAAPLMKYGERIFSRQGFIDALTPSEKAMR 197
>gi|424033772|ref|ZP_17773183.1| ribosomal protein S2 [Vibrio cholerae HENC-01]
gi|408873885|gb|EKM13068.1| ribosomal protein S2 [Vibrio cholerae HENC-01]
Length = 242
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAELAKIGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLK+ + +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++Y+IPGNDD+ +++ LY A V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------ASAVTEGRNKDVAAVAE-KDGFVEA 241
>gi|407795714|ref|ZP_11142672.1| 30S ribosomal protein S2 [Salimicrobium sp. MJ3]
gi|407020055|gb|EKE32769.1| 30S ribosomal protein S2 [Salimicrobium sp. MJ3]
Length = 251
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 157/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A Y+ L GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNYVRDLAADGGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA RAGM +I+QRWLGG LTNFKTI+ I RLKE++ +G+
Sbjct: 68 LFVGTKKQAQDTVREEANRAGMYYINQRWLGGTLTNFKTIRKRIGRLKEIERMEEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE + +++ KL R +GGI+NM +PDA+F+ID + A++EA KL+IPI+G+V
Sbjct: 128 VLPKKEVMELNKEREKLERFLGGIRNMESLPDALFVIDPRKERIAIAEAHKLDIPIVGMV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN PD I+YVIP NDD+ +++ L T + DA L+AK
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEAK 225
>gi|345019862|ref|ZP_08783475.1| 30S ribosomal protein S2 [Ornithinibacillus scapharcae TW25]
Length = 248
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/247 (46%), Positives = 169/247 (68%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A Y+ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNYVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA+R+GM +++QRWLGG LTNF+TI+ I RL E++
Sbjct: 62 ANGGTVLFVGTKKQAQDSVKEEAIRSGMYYVNQRWLGGTLTNFQTIRKRINRLVEIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + +++ +L + +GGIK+M +PDA+F+ID + A++EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVGLLKEKERLVKFLGGIKDMKKLPDALFVIDPRKERIAIAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMEC 408
PI+G+VDTN PD I+YVIP NDD+ +++ L T I DA L+ K EL A +
Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKIADAILEVKQGEELEVVEEAQTEDS 241
Query: 409 KKALIEA 415
+A EA
Sbjct: 242 VEATEEA 248
>gi|373857318|ref|ZP_09600060.1| ribosomal protein S2 [Bacillus sp. 1NLA3E]
gi|372452968|gb|EHP26437.1| ribosomal protein S2 [Bacillus sp. 1NLA3E]
Length = 232
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 164/229 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + +EA R+GM F++QRWLGG LTNF+TI+ I RLK+++
Sbjct: 62 GNGGKILFVGTKKQAQDSVRDEAARSGMYFVNQRWLGGTLTNFETIQKRISRLKDIERMS 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++Q +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVQLRKQQERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
PI+G+VDTN PD I+YVIP NDD+ +++ L T + DA L+AK E+
Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEAKQGEEV 230
>gi|16803698|ref|NP_465183.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e]
gi|46907887|ref|YP_014276.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093767|ref|ZP_00231516.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858]
gi|47097503|ref|ZP_00235044.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854]
gi|217964192|ref|YP_002349870.1| 30S ribosomal protein S2 [Listeria monocytogenes HCC23]
gi|226224258|ref|YP_002758365.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824281|ref|ZP_05229282.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194]
gi|254829462|ref|ZP_05234149.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165]
gi|254852282|ref|ZP_05241630.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503]
gi|254912332|ref|ZP_05262344.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818]
gi|254931598|ref|ZP_05264957.1| ribosomal protein S2 [Listeria monocytogenes HPB2262]
gi|254936659|ref|ZP_05268356.1| ribosomal protein S2 [Listeria monocytogenes F6900]
gi|284802050|ref|YP_003413915.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578]
gi|284995192|ref|YP_003416960.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923]
gi|290893249|ref|ZP_06556236.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071]
gi|300766500|ref|ZP_07076449.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017]
gi|315282614|ref|ZP_07870985.1| ribosomal protein S2 [Listeria marthii FSL S4-120]
gi|386008431|ref|YP_005926709.1| rpsB [Listeria monocytogenes L99]
gi|386027035|ref|YP_005947811.1| 30S ribosomal protein S2 [Listeria monocytogenes M7]
gi|386043969|ref|YP_005962774.1| 30S ribosomal protein S2 [Listeria monocytogenes 10403S]
gi|386047309|ref|YP_005965641.1| 30S ribosomal protein S2 [Listeria monocytogenes J0161]
gi|386050634|ref|YP_005968625.1| 30S ribosomal protein S2 [Listeria monocytogenes FSL R2-561]
gi|386053910|ref|YP_005971468.1| 30S ribosomal protein S2 [Listeria monocytogenes Finland 1998]
gi|386732395|ref|YP_006205891.1| 30S ribosomal protein S2 [Listeria monocytogenes 07PF0776]
gi|404281219|ref|YP_006682117.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2755]
gi|404284154|ref|YP_006685051.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2372]
gi|404287085|ref|YP_006693671.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404408098|ref|YP_006690813.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2376]
gi|404410961|ref|YP_006696549.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC5850]
gi|404413738|ref|YP_006699325.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC7179]
gi|405750005|ref|YP_006673471.1| 30S ribosomal protein S2 [Listeria monocytogenes ATCC 19117]
gi|405752880|ref|YP_006676345.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2378]
gi|405755817|ref|YP_006679281.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2540]
gi|405758709|ref|YP_006687985.1| 30S ribosomal protein S2 [Listeria monocytogenes SLCC2479]
gi|406704436|ref|YP_006754790.1| ribosomal protein S2 [Listeria monocytogenes L312]
gi|417316458|ref|ZP_12103106.1| 30S ribosomal protein S2 [Listeria monocytogenes J1816]
gi|422409893|ref|ZP_16486854.1| ribosomal protein S2 [Listeria monocytogenes FSL F2-208]
gi|422809740|ref|ZP_16858151.1| SSU ribosomal protein S2p (SAe) [Listeria monocytogenes FSL J1-208]
gi|424823418|ref|ZP_18248431.1| 30S ribosomal protein S2 [Listeria monocytogenes str. Scott A]
gi|25009209|sp|Q8Y6M6.1|RS2_LISMO RecName: Full=30S ribosomal protein S2
gi|61215604|sp|Q71Z11.1|RS2_LISMF RecName: Full=30S ribosomal protein S2
gi|254764481|sp|B8DFR3.1|RS2_LISMH RecName: Full=30S ribosomal protein S2
gi|259495218|sp|C1KVV4.1|RS2_LISMC RecName: Full=30S ribosomal protein S2
gi|16411094|emb|CAC99736.1| 30S ribosomal protein S2 [Listeria monocytogenes EGD-e]
gi|46881156|gb|AAT04453.1| ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47014118|gb|EAL05110.1| ribosomal protein S2 [Listeria monocytogenes str. 1/2a F6854]
gi|47017854|gb|EAL08638.1| ribosomal protein S2 [Listeria monocytogenes str. 4b H7858]
gi|217333462|gb|ACK39256.1| ribosomal protein S2 [Listeria monocytogenes HCC23]
gi|225876720|emb|CAS05429.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258601877|gb|EEW15202.1| ribosomal protein S2 [Listeria monocytogenes FSL N3-165]
gi|258605588|gb|EEW18196.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-503]
gi|258609255|gb|EEW21863.1| ribosomal protein S2 [Listeria monocytogenes F6900]
gi|284057612|gb|ADB68553.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5578]
gi|284060659|gb|ADB71598.1| 30S ribosomal protein S2 [Listeria monocytogenes 08-5923]
gi|290557231|gb|EFD90758.1| ribosomal protein S2 [Listeria monocytogenes FSL J2-071]
gi|293583152|gb|EFF95184.1| ribosomal protein S2 [Listeria monocytogenes HPB2262]
gi|293590313|gb|EFF98647.1| 30S ribosomal protein S2 [Listeria monocytogenes J2818]
gi|293593516|gb|EFG01277.1| ribosomal protein S2 [Listeria monocytogenes FSL J1-194]
gi|300512793|gb|EFK39891.1| ribosomal protein S2 [Listeria monocytogenes FSL N1-017]
gi|307571241|emb|CAR84420.1| rpsB [Listeria monocytogenes L99]
gi|313608439|gb|EFR84371.1| ribosomal protein S2 [Listeria monocytogenes FSL F2-208]
gi|313613739|gb|EFR87512.1| ribosomal protein S2 [Listeria marthii FSL S4-120]
gi|328465020|gb|EGF36299.1| 30S ribosomal protein S2 [Listeria monocytogenes J1816]
gi|332312098|gb|EGJ25193.1| 30S ribosomal protein S2 [Listeria monocytogenes str. Scott A]
gi|336023616|gb|AEH92753.1| 30S ribosomal protein S2 [Listeria monocytogenes M7]
gi|345534300|gb|AEO03741.1| 30S ribosomal protein S2 [Listeria monocytogenes J0161]
gi|345537203|gb|AEO06643.1| 30S ribosomal protein S2 [Listeria monocytogenes 10403S]
gi|346424480|gb|AEO26005.1| ribosomal protein S2 [Listeria monocytogenes FSL R2-561]
gi|346646561|gb|AEO39186.1| 30S ribosomal protein S2 [Listeria monocytogenes Finland 1998]
gi|378753354|gb|EHY63939.1| SSU ribosomal protein S2p (SAe) [Listeria monocytogenes FSL J1-208]
gi|384391153|gb|AFH80223.1| 30S ribosomal protein S2 [Listeria monocytogenes 07PF0776]
gi|404219205|emb|CBY70569.1| ribosomal protein S2 [Listeria monocytogenes ATCC 19117]
gi|404222080|emb|CBY73443.1| ribosomal protein S2 [Listeria monocytogenes SLCC2378]
gi|404225017|emb|CBY76379.1| ribosomal protein S2 [Listeria monocytogenes SLCC2540]
gi|404227854|emb|CBY49259.1| ribosomal protein S2 [Listeria monocytogenes SLCC2755]
gi|404230787|emb|CBY52191.1| ribosomal protein S2 [Listeria monocytogenes SLCC5850]
gi|404233656|emb|CBY55059.1| ribosomal protein S2 [Listeria monocytogenes SLCC2372]
gi|404236591|emb|CBY57993.1| ribosomal protein S2 [Listeria monocytogenes SLCC2479]
gi|404239437|emb|CBY60838.1| ribosomal protein S2 [Listeria monocytogenes SLCC7179]
gi|404242247|emb|CBY63647.1| ribosomal protein S2 [Listeria monocytogenes SLCC2376]
gi|404246014|emb|CBY04239.1| ribosomal protein S2 [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361466|emb|CBY67739.1| ribosomal protein S2 [Listeria monocytogenes L312]
gi|441471388|emb|CCQ21143.1| 30S ribosomal protein S2 [Listeria monocytogenes]
gi|441474520|emb|CCQ24274.1| 30S ribosomal protein S2 [Listeria monocytogenes N53-1]
Length = 249
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 163/231 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ LK+++ +G+
Sbjct: 68 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL +AP+
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPV 238
>gi|239826643|ref|YP_002949267.1| 30S ribosomal protein S2 [Geobacillus sp. WCH70]
gi|259495216|sp|C5D9B5.1|RS2_GEOSW RecName: Full=30S ribosomal protein S2
gi|239806936|gb|ACS24001.1| ribosomal protein S2 [Geobacillus sp. WCH70]
Length = 235
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RLKE++
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKMA 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++Q +L + +GGIK M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGTFDVLPKKEVIRIKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|117621095|ref|YP_855714.1| 30S ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330830755|ref|YP_004393707.1| 30S ribosomal protein S2 [Aeromonas veronii B565]
gi|406675998|ref|ZP_11083184.1| 30S ribosomal protein S2 [Aeromonas veronii AMC35]
gi|411010339|ref|ZP_11386668.1| 30S ribosomal protein S2 [Aeromonas aquariorum AAK1]
gi|423197730|ref|ZP_17184313.1| 30S ribosomal protein S2 [Aeromonas hydrophila SSU]
gi|423202613|ref|ZP_17189192.1| 30S ribosomal protein S2 [Aeromonas veronii AER39]
gi|423208572|ref|ZP_17195126.1| 30S ribosomal protein S2 [Aeromonas veronii AER397]
gi|166225235|sp|A0KHG3.1|RS2_AERHH RecName: Full=30S ribosomal protein S2
gi|117562502|gb|ABK39450.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|328805891|gb|AEB51090.1| 30S ribosomal protein S2 [Aeromonas veronii B565]
gi|404614809|gb|EKB11788.1| 30S ribosomal protein S2 [Aeromonas veronii AER39]
gi|404618417|gb|EKB15337.1| 30S ribosomal protein S2 [Aeromonas veronii AER397]
gi|404626221|gb|EKB23031.1| 30S ribosomal protein S2 [Aeromonas veronii AMC35]
gi|404631418|gb|EKB28054.1| 30S ribosomal protein S2 [Aeromonas hydrophila SSU]
Length = 242
Score = 241 bits (615), Expect = 1e-60, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM SYIFG R+K+HIINLEKT+ M++ A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A R +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F++D + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ +++ LY D L+A+
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|421498360|ref|ZP_15945478.1| 30S ribosomal protein S2 [Aeromonas media WS]
gi|407182661|gb|EKE56600.1| 30S ribosomal protein S2 [Aeromonas media WS]
Length = 237
Score = 241 bits (615), Expect = 2e-60, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM SYIFG R+K+HIINLEKT+ M++ A+ +I + KG +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKGKVL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A R +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F++D + A+ EA L IP++ +VD
Sbjct: 124 LTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVSIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ +++ LY D L+A+
Sbjct: 184 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 220
>gi|16800835|ref|NP_471103.1| 30S ribosomal protein S2 [Listeria innocua Clip11262]
gi|116873091|ref|YP_849872.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|423100747|ref|ZP_17088454.1| ribosomal protein S2 [Listeria innocua ATCC 33091]
gi|25009214|sp|Q92B01.1|RS2_LISIN RecName: Full=30S ribosomal protein S2
gi|123458516|sp|A0AJB1.1|RS2_LISW6 RecName: Full=30S ribosomal protein S2
gi|16414254|emb|CAC96998.1| 30S ribosomal protein S2 [Listeria innocua Clip11262]
gi|116741969|emb|CAK21093.1| 30S ribosomal protein S2 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|370792971|gb|EHN60814.1| ribosomal protein S2 [Listeria innocua ATCC 33091]
Length = 249
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 163/231 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ LK+++ +G+
Sbjct: 68 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKMEADGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL +AP+
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPV 238
>gi|347549048|ref|YP_004855376.1| putative 30S ribosomal protein S2 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982119|emb|CBW86113.1| Putative 30S ribosomal protein S2 [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 249
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 163/231 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ LK+++ +G+
Sbjct: 68 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKMEADGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL +AP+
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPV 238
>gi|451811160|ref|YP_007447615.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|451776318|gb|AGF47317.1| stringent starvation protein A [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 203
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI ++DL NKP IF MN YGQVPIL ER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 24 MDFEIHNVDLKNKPKEIFDMNSYGQVPILSERELILYESNIINEYIDERFPHPQLMPADP 83
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENE-RNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
L RAR RL L FEKE+F + ++E++ T+ K AR I++RL L+P+ KNK+
Sbjct: 84 LTRARVRLFLYTFEKELFSQVKIIESQDTTSTNEKNILEARNNIKERLTQLSPILTKNKF 143
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+LGD+FSMLD+ IAPLLWRL+YYGI+L KSA+PL KYAERIFSR +Y+ESL+PAEK+M+
Sbjct: 144 LLGDDFSMLDIAIAPLLWRLEYYGISLPKSAAPLQKYAERIFSRSAYIESLSPAEKLMR 202
>gi|429463103|ref|YP_007184566.1| RNA polymerase-associated protein [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|429338617|gb|AFZ83040.1| RNA polymerase-associated protein [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
Length = 204
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 144/179 (80%), Gaps = 1/179 (0%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI ++DL NKP IF MN YGQVPIL ER+LILYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFEIHNVDLKNKPKEIFDMNSYGQVPILSERELILYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENE-RNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
L RAR RL L FEKE+F + ++E++ T+ K AR I++RL L+P+ KNK+
Sbjct: 85 LTRARVRLFLYTFEKELFSQVKIIESQDTTSTNEKNILEARNNIKERLTQLSPILTKNKF 144
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+LGD+FSMLD+ IAPLLWRL+YYGI+L KSA+PL KYAERIFSR +Y+ESL+PAEK+M+
Sbjct: 145 LLGDDFSMLDIAIAPLLWRLEYYGISLPKSAAPLQKYAERIFSRSAYIESLSPAEKLMR 203
>gi|345874655|ref|ZP_08826455.1| RegF protein [Neisseria weaveri LMG 5135]
gi|417958100|ref|ZP_12601017.1| RegF protein [Neisseria weaveri ATCC 51223]
gi|343967492|gb|EGV35737.1| RegF protein [Neisseria weaveri ATCC 51223]
gi|343970014|gb|EGV38212.1| RegF protein [Neisseria weaveri LMG 5135]
Length = 204
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDL+L+ESNIINEYIDERFP+PQLM DP
Sbjct: 28 MDFEIKDVDIFNKPEDLAIMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDP 87
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H+ +LEN + S K +ARE I + L TLAP F K+KY+
Sbjct: 88 VMRGRGRLVLFRMEKELFSHVQVLENP--EASNKDQAKAREAIGNGLTTLAPAFAKSKYI 145
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSM+DV ++PLLWRLDYY I L K+A+PL KYAERIF R +++E+LTPAEK M+
Sbjct: 146 LGEDFSMIDVALSPLLWRLDYYDIKLGKTAAPLFKYAERIFQREAFIEALTPAEKAMR 203
>gi|415886599|ref|ZP_11548379.1| 30S ribosomal protein S2 [Bacillus methanolicus MGA3]
gi|387587286|gb|EIJ79609.1| 30S ribosomal protein S2 [Bacillus methanolicus MGA3]
Length = 237
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNWVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ IQRLK+++
Sbjct: 62 ANGGTILFVGTKKQAQDSVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIQRLKDIERMA 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++Q +L + +GGIK M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFDVLPKKEVVQLKKEQERLEKFLGGIKEMKQLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PI+G+VDTN PD I+ VIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKIADAILEAK 225
>gi|297584067|ref|YP_003699847.1| 30S ribosomal protein S2 [Bacillus selenitireducens MLS10]
gi|297142524|gb|ADH99281.1| ribosomal protein S2 [Bacillus selenitireducens MLS10]
Length = 242
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 156/217 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ L GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVRKVDEAFNFVRDLAADGGTM 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ +A EA R GM +I+QRWLGG LTNF+TI+ I RLKE++ +G+
Sbjct: 68 LFVGTKKQAQDSVAEEAERCGMYYINQRWLGGTLTNFETIRKRINRLKEIEKMEEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++ +L + +GGIK M +PDA+FIID + AV+EA KLNIPI+G+V
Sbjct: 128 VLPKKEVVLIKKEWDRLEKFLGGIKEMTRLPDALFIIDPRKERIAVAEAHKLNIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVRLLTAKMADAIIEA 224
>gi|374313464|ref|YP_005059894.1| 30S ribosomal protein S2 [Granulicella mallensis MP5ACTX8]
gi|358755474|gb|AEU38864.1| ribosomal protein S2 [Granulicella mallensis MP5ACTX8]
Length = 311
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 159/221 (71%), Gaps = 1/221 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T E +++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KTL M++ A +++
Sbjct: 1 MASITMKE-LLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDASKFVTD 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
L + +LFVGTKRQA+ +A EA RAGMP+I+ RWLGGLLTN+ T++ S++RL+E+D
Sbjct: 60 LTATGKLVLFVGTKRQAQDAVAEEATRAGMPYINSRWLGGLLTNWVTVQKSVKRLQELDD 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
T+G L+KKE + R++ L+ + GIK+M +PDAIF+ID AV+EA KL
Sbjct: 120 MSTDGRYELLTKKEVIKLERERKSLSTNLSGIKSMKRLPDAIFVIDSNNEAIAVAEARKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
IP++ VVDTN P ++YVIPGNDD+ ++I L+T I D+
Sbjct: 180 GIPVVAVVDTNCDPTVVDYVIPGNDDALRAIRLFTTKIADS 220
>gi|423205630|ref|ZP_17192186.1| 30S ribosomal protein S2 [Aeromonas veronii AMC34]
gi|404623905|gb|EKB20754.1| 30S ribosomal protein S2 [Aeromonas veronii AMC34]
Length = 242
Score = 241 bits (614), Expect = 2e-60, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM SYIFG R+K+HIINLEKT+ M++ A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A R +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F++D + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ +++ LY D L+A+
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|427701394|ref|YP_007044616.1| uridylate kinase [Cyanobium gracile PCC 6307]
gi|427344562|gb|AFY27275.1| uridylate kinase [Cyanobium gracile PCC 6307]
Length = 239
Score = 240 bits (613), Expect = 2e-60, Method: Composition-based stats.
Identities = 114/222 (51%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I+++I ++ E+VS G +LAIV+GGGNI RG+ +DR+TAD
Sbjct: 12 GEALMGDQGYGIDPAIVQSIAKDVVEVVSGGTQLAIVVGGGNIFRGLKGSAAGMDRATAD 71
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N++ L D L + G+ + V SAIS+++ E YI AI++LE+G+VVIF G
Sbjct: 72 YVGMLATVMNAITLQDGLERVGVPTRVQSAISMQEVAEPYIRRRAIRHLEKGRVVIFGAG 131
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDTTAALRAAEI A++I KATKVDG+Y+ DP K A+ Y+ +TF +V+S +L
Sbjct: 132 CGNPFFTTDTTAALRAAEINADVIFKATKVDGVYDKDPAKHSDAVRYETLTFLDVLSGEL 191
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
E+MDSTA + C+D +PI VF + SG + R + G+ GT +
Sbjct: 192 EVMDSTAIALCKDNAIPIVVFDLFGSGNIGRAVAGEPIGTSI 233
>gi|424714533|ref|YP_007015248.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424013717|emb|CCO64257.1| 30S ribosomal protein S2 [Listeria monocytogenes serotype 4b str.
LL195]
Length = 270
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 163/231 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 29 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 88
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ LK+++ +G+
Sbjct: 89 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFE 148
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 149 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 208
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL +AP+
Sbjct: 209 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPV 259
>gi|421860616|ref|ZP_16292722.1| ribosomal protein S2 [Paenibacillus popilliae ATCC 14706]
gi|410829802|dbj|GAC43159.1| ribosomal protein S2 [Paenibacillus popilliae ATCC 14706]
Length = 232
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 155/217 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ L GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAAENGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R GM +I+QRWLGG LTNF+TI+ I RLK+++ +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFQTIQKRIDRLKQLEAMEQDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q +L + +GGIKNM +P A+FIID + AV+EA KL IPI+G+V
Sbjct: 128 VLPKKEVILLRKEQERLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEA 224
>gi|397656056|ref|YP_006496758.1| 30S ribosomal protein S2 [Klebsiella oxytoca E718]
gi|295098662|emb|CBK87752.1| SSU ribosomal protein S2P [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|394344686|gb|AFN30807.1| SSU ribosomal protein S2p (SAe) [Klebsiella oxytoca E718]
Length = 236
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++++LY + A TV E RS+ LA + +++ +EA
Sbjct: 184 TNSDPDGVDFVIPGNDDAIRAVSLYLSAV------AATVREGRSQDLAS--QAEESFVEA 235
>gi|157962704|ref|YP_001502738.1| 30S ribosomal protein S2 [Shewanella pealeana ATCC 700345]
gi|189044995|sp|A8H6L6.1|RS2_SHEPA RecName: Full=30S ribosomal protein S2
gi|157847704|gb|ABV88203.1| ribosomal protein S2 [Shewanella pealeana ATCC 700345]
Length = 242
Score = 240 bits (612), Expect = 3e-60, Method: Composition-based stats.
Identities = 112/212 (52%), Positives = 152/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN SPDGINY+IPGNDD+ +SI LYT+ + A
Sbjct: 189 TNSSPDGINYIIPGNDDAMRSIRLYTQSVAAA 220
>gi|334703603|ref|ZP_08519469.1| 30S ribosomal protein S2 [Aeromonas caviae Ae398]
Length = 242
Score = 240 bits (612), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM SYIFG R+K+HIINLEKT+ M++ A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A R +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSEDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F++D + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YVIPGNDD+ +++ LY D L+A+
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|325295601|ref|YP_004282115.1| uridylate kinase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066049|gb|ADY74056.1| uridylate kinase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 240
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEAL ++Y I+ ++ + EI +V G+E+AIVIGGGNI RG+S Q +DR+TAD
Sbjct: 14 GEALQGANSYGIDPEFLRRLAQEIKSVVELGVEVAIVIGGGNIFRGVSGATQGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT+IN+LAL D L K + + V++AI + + E YI AI++LE+G+VVIF G
Sbjct: 74 YMGMLATVINALALQDALEKEDLQTRVLTAIEMREIAEPYIRRRAIRHLEKGRVVIFGAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALRAAEI A+++LKATKVDGIY +DP K +A K+++ EVI+ +
Sbjct: 134 TGNPFFTTDTAAALRAAEINADVLLKATKVDGIYTADPEKDKNAKKLDKLSYKEVITNGI 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MDS A S C + ++PI VF + K G L++V++GK+ G+LV
Sbjct: 194 KVMDSAAVSLCMENQIPIVVFDVRKPGNLEKVVKGKSIGSLV 235
>gi|86146890|ref|ZP_01065209.1| 30S ribosomal protein S2 [Vibrio sp. MED222]
gi|407070692|ref|ZP_11101530.1| 30S ribosomal protein S2 [Vibrio cyclitrophicus ZF14]
gi|85835342|gb|EAQ53481.1| 30S ribosomal protein S2 [Vibrio sp. MED222]
Length = 243
Score = 240 bits (612), Expect = 3e-60, Method: Composition-based stats.
Identities = 117/240 (48%), Positives = 166/240 (69%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ I ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEIAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAINSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +++ LY DA V E R+K +A + K +EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRAVQLYLNAAADA------VKEGRNKDVAAVAAEKDGFVEA 242
>gi|209573691|sp|A1S4P0.2|RS2_SHEAM RecName: Full=30S ribosomal protein S2
Length = 242
Score = 240 bits (612), Expect = 3e-60, Method: Composition-based stats.
Identities = 109/207 (52%), Positives = 151/207 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTK 382
TN SPDG+NY++PGNDD+ ++I LYT+
Sbjct: 189 TNASPDGVNYIVPGNDDAMRAIRLYTE 215
>gi|389842162|ref|YP_006344246.1| 30S ribosomal protein S2 [Cronobacter sakazakii ES15]
gi|387852638|gb|AFK00736.1| 30S ribosomal protein S2 [Cronobacter sakazakii ES15]
Length = 236
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++++LY + A TV E RS+ LA + +++ +EA
Sbjct: 184 TNSDPDGVDFVIPGNDDAIRAVSLYLNAV------AATVREGRSQDLA--AQAEESFVEA 235
>gi|56476068|ref|YP_157657.1| stringent starvation protein a [Aromatoleum aromaticum EbN1]
gi|56312111|emb|CAI06756.1| stringent starvation protein a [Aromatoleum aromaticum EbN1]
Length = 198
Score = 240 bits (612), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/178 (60%), Positives = 147/178 (82%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+ D+DL+NKP++I +NPY +VP+LV+RDL+LYE+NIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEVIDVDLYNKPEDIAVINPYNRVPVLVDRDLVLYEANIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
++RARAR +L FE E+F H+ +LE + KG +++R +RD L+ LAP+F+K K+M
Sbjct: 85 ILRARARQLLHTFEHELFSHIDVLEKNQ-----KGVEKSRAHVRDELVQLAPIFVKQKFM 139
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGDEFSMLDV IAPLLWRL++YGI L K+A+ L+KYAERIFSR ++++LTP+EK+M+
Sbjct: 140 LGDEFSMLDVAIAPLLWRLEHYGIELPKAAANLMKYAERIFSRQGFIDALTPSEKVMR 197
>gi|319649534|ref|ZP_08003690.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2]
gi|317398696|gb|EFV79378.1| 30S ribosomal protein S2 [Bacillus sp. 2_A_57_CT2]
Length = 233
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 165/231 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA+R+GM +++QRWLGG LTNF+TI+ I RLK+++
Sbjct: 62 GNGGTILFVGTKKQAQDSVKEEAIRSGMFYVNQRWLGGTLTNFETIQKRIARLKDIERMS 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++Q +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVQLKKEQERLEKFLGGIKDMKSLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
PI+G+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK E+ +
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQGEEVTT 232
>gi|429744345|ref|ZP_19277842.1| UMP kinase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163126|gb|EKY05379.1| UMP kinase [Neisseria sp. oral taxon 020 str. F0370]
Length = 239
Score = 240 bits (612), Expect = 4e-60, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GEALM GD + IN I I+ ++ EI G+++ +V+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GEALMGGDPFGINRDTIMQIVGQVKEITDMGVQVGVVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D G+ + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFESLGVKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K GALKRVI G++EGTLV+
Sbjct: 184 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKEGALKRVISGEDEGTLVH 238
>gi|333375803|ref|ZP_08467603.1| stringent starvation protein A [Kingella kingae ATCC 23330]
gi|332969591|gb|EGK08609.1| stringent starvation protein A [Kingella kingae ATCC 23330]
Length = 201
Score = 240 bits (612), Expect = 4e-60, Method: Composition-based stats.
Identities = 111/178 (62%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+DID+FNKP+++ MNPY +VP+LVERDL+LYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDIDVFNKPEDLAVMNPYNEVPVLVERDLVLYESNIINEYIDERFPHPQLMPVDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+FIH+ LEN ++ K +ARE I D L +AP F KNKY+
Sbjct: 85 VMRGRGRLVLHRLEKELFIHVKTLENP--TSTAKEQSKAREAIADGLTMIAPAFTKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV +APLLWRLD+Y I L K+A+P++K AERIF R +++++LTPAEK M+
Sbjct: 143 LGDDFSMIDVALAPLLWRLDHYEIKLGKAAAPILKSAERIFQRSAFIDALTPAEKAMR 200
>gi|317969622|ref|ZP_07971012.1| uridylate kinase [Synechococcus sp. CB0205]
Length = 237
Score = 240 bits (612), Expect = 4e-60, Method: Composition-based stats.
Identities = 112/222 (50%), Positives = 163/222 (73%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +++ I +++ +V+ G +LAIV+GGGNI RG+ +DR+TAD
Sbjct: 12 GEALMGEQGYGIDPAVVDAIAKDVAAVVADGSQLAIVVGGGNIFRGLKGSAAGMDRATAD 71
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N++ L D L ++GI + V SAIS+++ E YI AI+++E+G+VVIFA G
Sbjct: 72 YVGMLATVMNAITLQDGLERAGIPTRVQSAISMQEVAEPYIRRKAIRHMEKGRVVIFAAG 131
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDTTAALRAAEI A+++ KATKVDG+Y+ DPNK A+ Y+ ++F +V+SK+L
Sbjct: 132 TGNPFFTTDTTAALRAAEIGADVVFKATKVDGVYDKDPNKHADAVRYESLSFMDVLSKEL 191
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
E+MDSTA + C+D +PI VF + SG + R + G+ GT +
Sbjct: 192 EVMDSTAIALCKDNAIPIVVFDLFGSGNIGRAVRGEPIGTSI 233
>gi|378954024|ref|YP_005211511.1| 30s ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357204635|gb|AET52681.1| 30s ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
Length = 236
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++++LY + A TV E RS+ LA + +++ +EA
Sbjct: 184 TNSDPDGVDFVIPGNDDAIRAVSLYLGAV------AATVCEGRSQDLAS--QAEESFVEA 235
>gi|350427681|ref|XP_003494842.1| PREDICTED: 30S ribosomal protein S2-like [Bombus impatiens]
Length = 237
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 158/232 (68%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ +G +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIAARRGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKQAAENCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQANDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIKNM +PDAIF+I + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTREMAKLENSLGGIKNMGGLPDAIFVIGADHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN +PDGI+YVIPGNDD+ ++I LYT + ++ + R + AP+ E
Sbjct: 184 TNSNPDGIDYVIPGNDDAIRAIQLYTTAV------SQAISAGREQNQAPVSE 229
>gi|189425766|ref|YP_001952943.1| uridylate kinase [Geobacter lovleyi SZ]
gi|189422025|gb|ACD96423.1| uridylate kinase [Geobacter lovleyi SZ]
Length = 239
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 159/222 (71%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GE+L Y I+ S I I +EI E+V G+ELA+VIGGGNI RG++ + +DR++AD
Sbjct: 15 GESLAGDQGYGIDPSTINTIAAEIKEVVGDGVELALVIGGGNIFRGLAASSKGMDRASAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT+INSLA+ D L K G+ + V SAI++++ E YI A+++LE+G+VVIF G
Sbjct: 75 YMGMLATVINSLAMQDALEKIGVSTRVQSAIAMQEVAEPYIRRKAVRHLEKGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT A+LRA EI A++ILK TKVDG+Y +DP K +A Y ++++ EV+ K L
Sbjct: 135 TGNPYFTTDTAASLRAMEINAQVILKGTKVDGVYTADPKKDPTATRYNELSYIEVLQKGL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA S C D LPI VF + G +KRVI G+ GT+V
Sbjct: 195 QVMDATATSLCMDNNLPIIVFDLTTPGNIKRVISGEAIGTIV 236
>gi|251790745|ref|YP_003005466.1| 30S ribosomal protein S2 [Dickeya zeae Ech1591]
gi|247539366|gb|ACT07987.1| ribosomal protein S2 [Dickeya zeae Ech1591]
Length = 241
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEALL R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++Y+IPGNDD+ ++++LY + A V E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDYIIPGNDDAIRAVSLYLSAV------AAAVREGRSQDLAE--QAEESFVEA 240
>gi|237808856|ref|YP_002893296.1| 30S ribosomal protein S2 [Tolumonas auensis DSM 9187]
gi|259495227|sp|C4L864.1|RS2_TOLAT RecName: Full=30S ribosomal protein S2
gi|237501117|gb|ACQ93710.1| ribosomal protein S2 [Tolumonas auensis DSM 9187]
Length = 242
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTRFWNPKM +IFG RN +HIINLEKT+ M++ A+ Y+ + KG +L
Sbjct: 9 MLQAGVHFGHQTRFWNPKMKPFIFGARNNVHIINLEKTVPMFDDALNYLSSVASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAATEAVKEAAANCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSLDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PD +F+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
TN +PDG++Y+IPGNDD+ +++ LY D+ KT EL
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAAADSI---KTAREL 227
>gi|123443485|ref|YP_001007458.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160592|ref|YP_004297169.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386311545|ref|YP_006007601.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418242624|ref|ZP_12869131.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420259720|ref|ZP_14762419.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433547820|ref|ZP_20503871.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica IP 10393]
gi|166226768|sp|A1JP82.1|RS2_YERE8 RecName: Full=30S ribosomal protein S2
gi|122090446|emb|CAL13314.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318606930|emb|CBY28428.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664822|gb|ADZ41466.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859599|emb|CBX69939.1| 30S ribosomal protein S2 [Yersinia enterocolitica W22703]
gi|351777958|gb|EHB20140.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404512813|gb|EKA26649.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431791246|emb|CCO66911.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica IP 10393]
Length = 241
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + DA V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLNAVADA------VKEGRSQDLA--VQAEESFVEA 240
>gi|429743531|ref|ZP_19277083.1| putative stringent starvation protein A [Neisseria sp. oral taxon
020 str. F0370]
gi|429165117|gb|EKY07190.1| putative stringent starvation protein A [Neisseria sp. oral taxon
020 str. F0370]
Length = 201
Score = 239 bits (611), Expect = 4e-60, Method: Composition-based stats.
Identities = 109/178 (61%), Positives = 142/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ R R RL+L E+E+F H+ +LE +++ K +ARE + L LAP F KNKY+
Sbjct: 85 VQRGRGRLVLFRMERELFSHVQVLEAP--ESTSKEQAKAREAVSQGLTLLAPAFTKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+GD+FSM+DV IAPLLWRLD+Y I L K+A+PL+KYAER+F R +++E+LTPAEK M+
Sbjct: 143 MGDDFSMIDVAIAPLLWRLDHYDIKLGKNAAPLLKYAERLFQREAFIEALTPAEKAMR 200
>gi|289434942|ref|YP_003464814.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422419272|ref|ZP_16496227.1| ribosomal protein S2 [Listeria seeligeri FSL N1-067]
gi|422422360|ref|ZP_16499313.1| ribosomal protein S2 [Listeria seeligeri FSL S4-171]
gi|289171186|emb|CBH27728.1| 30S ribosomal protein S2 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313632964|gb|EFR99893.1| ribosomal protein S2 [Listeria seeligeri FSL N1-067]
gi|313637578|gb|EFS02986.1| ribosomal protein S2 [Listeria seeligeri FSL S4-171]
Length = 249
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 163/231 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ LK+++ +G+
Sbjct: 68 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIEKMEADGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ +L +AP+
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEDLTEAEVAPV 238
>gi|374982246|ref|ZP_09723567.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378958363|ref|YP_005215849.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|383495039|ref|YP_005395728.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|416657509|ref|ZP_11813725.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|417331295|ref|ZP_12115583.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|417339131|ref|ZP_12120757.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417346376|ref|ZP_12126244.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417355721|ref|ZP_12131458.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|417363494|ref|ZP_12136685.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|417388284|ref|ZP_12152457.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|417472465|ref|ZP_12168160.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|417515912|ref|ZP_12178989.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|417524466|ref|ZP_12184260.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|417536749|ref|ZP_12189814.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|418510750|ref|ZP_13077027.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|423138737|ref|ZP_17126375.1| ribosomal protein S2 [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|224466591|gb|ACN44421.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|321222200|gb|EFX47272.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323212158|gb|EFZ96982.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|353579946|gb|EHC41357.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353585996|gb|EHC45691.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353598084|gb|EHC54619.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353600117|gb|EHC56119.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|353626189|gb|EHC74789.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353654135|gb|EHC95498.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353655241|gb|EHC96308.1| SSU ribosomal protein S2p (SAe) [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353669720|gb|EHD06543.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Wandsworth str. A4-580]
gi|353670550|gb|EHD07114.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357960742|gb|EHJ84481.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|366085454|gb|EHN49337.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|374352235|gb|AEZ43996.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|379051291|gb|EHY69182.1| ribosomal protein S2 [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|380461860|gb|AFD57263.1| 30S ribosomal protein S2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
Length = 236
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++++LY + A TV E RS+ LA + +++ +EA
Sbjct: 184 TNSDPDGVDFVIPGNDDAIRAVSLYLGAV------AATVREGRSQDLAS--QAEESFVEA 235
>gi|198283286|ref|YP_002219607.1| uridylate kinase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666612|ref|YP_002425874.1| uridylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|415977840|ref|ZP_11559028.1| uridylate kinase [Acidithiobacillus sp. GGI-221]
gi|198247807|gb|ACH83400.1| uridylate kinase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518825|gb|ACK79411.1| uridylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339834145|gb|EGQ61929.1| uridylate kinase [Acidithiobacillus sp. GGI-221]
Length = 241
Score = 239 bits (611), Expect = 4e-60, Method: Composition-based stats.
Identities = 117/233 (50%), Positives = 166/233 (71%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS +LK GEALM Y ++ +++ I EI ++ G+++AIVIGGGNI RG++
Sbjct: 6 YSRILLKLS--GEALMGDGQYGVDREVVQRIAREIKDVSDTGVQIAIVIGGGNIFRGMAK 63
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+ +DR+TADYMGMLAT++N+LA+ D L G+ + V+SA+ IE+ E YI AI++L
Sbjct: 64 AAEGMDRATADYMGMLATVMNALAVQDALEHLGLPTRVLSALHIEQVAEPYIRRRAIRHL 123
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VVIF G GNPFFTTDT A+LRA EI AE++LK TKVDG+Y DP A+ Y++
Sbjct: 124 EKGRVVIFGAGTGNPFFTTDTAASLRAVEINAELVLKGTKVDGVYTDDPVSHPEAMRYRE 183
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+++ +V+ + L++MD+TA + CRD +PI VFSI KSGAL RV+ G+ EGT V
Sbjct: 184 LSYSQVLEQNLQVMDATAITLCRDNDMPIIVFSINKSGALMRVMLGEEEGTSV 236
>gi|404496110|ref|YP_006720216.1| 30S ribosomal protein S2 [Geobacter metallireducens GS-15]
gi|418065467|ref|ZP_12702840.1| ribosomal protein S2 [Geobacter metallireducens RCH3]
gi|123756464|sp|Q39W88.1|RS2_GEOMG RecName: Full=30S ribosomal protein S2
gi|78193719|gb|ABB31486.1| ribosomal protein S2 [Geobacter metallireducens GS-15]
gi|373562207|gb|EHP88424.1| ribosomal protein S2 [Geobacter metallireducens RCH3]
Length = 251
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 161/235 (68%), Gaps = 1/235 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T E +++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ +
Sbjct: 1 MSSVTMKE-LLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVRE 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
S T+LFVGTK+QA+ I EA R M +++QRWLGG+LTNF T+K SI RLK +D
Sbjct: 60 CAQSGETILFVGTKKQAQDAIGEEASRCNMYYVNQRWLGGMLTNFATVKQSIDRLKRLDA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G++ +KKEAL +++ KL + +GGIK M +P A+F+ID A++EA KL
Sbjct: 120 MFADGTVEAYTKKEALQLEKERQKLEKTLGGIKGMGKVPGALFVIDPKNETIAINEAKKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKT 401
IP++ VVDTN PD I+YVIPGNDD+ ++I L T + DA L+ + + +T
Sbjct: 180 GIPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVLEGAQARDAQLQT 234
>gi|332282843|ref|ZP_08395256.1| 30S ribosomal protein S2 [Shigella sp. D9]
gi|332105195|gb|EGJ08541.1| 30S ribosomal protein S2 [Shigella sp. D9]
Length = 307
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 75 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 134
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 135 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 194
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 195 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 254
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA + +++ +EA
Sbjct: 255 TNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQDLAS--QAEESFVEA 306
>gi|331680748|ref|ZP_08381407.1| ribosomal protein S2 [Escherichia coli H591]
gi|331072211|gb|EGI43547.1| ribosomal protein S2 [Escherichia coli H591]
Length = 306
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 74 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 133
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 134 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 193
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 194 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 253
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA + +++ +EA
Sbjct: 254 TNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQDLAS--QAEESFVEA 305
>gi|327475253|gb|AEA77221.1| SSU ribosomal protein S2p [Bacillus aquimaris]
Length = 235
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 161/224 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A +++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYKFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA RAGM +I+QRWLGG LTNF+TI+ I RLKE++
Sbjct: 62 GNGGKVLFVGTKKQAQESVKEEAERAGMYYINQRWLGGTLTNFETIQKRISRLKEIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++ +L + +GGIK+MN +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMNTLPDALFIIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PI+G+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAK 225
>gi|290473657|ref|YP_003466529.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004]
gi|289172962|emb|CBJ79733.1| 30S ribosomal subunit protein S2 [Xenorhabdus bovienii SS-2004]
Length = 241
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALAELNKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I EA+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAACEAIKEEALGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A D RS+ LA ++ ++ L++A
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVRDG------RSQDLA--VQAEEGLVDA 240
>gi|209363842|ref|YP_001424015.2| 30S ribosomal protein S2 [Coxiella burnetii Dugway 5J108-111]
gi|212212243|ref|YP_002303179.1| 30S ribosomal protein S2 [Coxiella burnetii CbuG_Q212]
gi|215919172|ref|NP_820375.2| 30S ribosomal protein S2 [Coxiella burnetii RSA 493]
gi|206584056|gb|AAO90889.2| SSU ribosomal protein S2P [Coxiella burnetii RSA 493]
gi|207081775|gb|ABS78321.2| SSU ribosomal protein S2P [Coxiella burnetii Dugway 5J108-111]
gi|212010653|gb|ACJ18034.1| SSU ribosomal protein S2P [Coxiella burnetii CbuG_Q212]
Length = 359
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/225 (51%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YI+G R KIHIINLE+TL + A++++ ++ +G +
Sbjct: 54 QLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKEVASKRGKV 113
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK AR ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N
Sbjct: 114 LFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLENEENL 173
Query: 295 -KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L R++ KL+ + GIKNM +PD +F+IDV + + AV EA +L I ++G+
Sbjct: 174 VGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGITVLGI 233
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
VDTN SPD I++VIPGNDD+ ++I LY K I D +DA++V EL+
Sbjct: 234 VDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARSVLELQ 278
>gi|212218984|ref|YP_002305771.1| 30S ribosomal protein S2 [Coxiella burnetii CbuK_Q154]
gi|212013246|gb|ACJ20626.1| SSU ribosomal protein S2P [Coxiella burnetii CbuK_Q154]
Length = 359
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/225 (51%), Positives = 167/225 (74%), Gaps = 1/225 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YI+G R KIHIINLE+TL + A++++ ++ +G +
Sbjct: 54 QLLEAGVHFGHQTRYWNPKMAPYIYGARQKIHIINLEETLPAFRDALKFVKKVASKRGKV 113
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK AR ++ EA R GMP++D RWLGG+LTN+KTI+ SI+RLKE++ + N
Sbjct: 114 LFVGTKFAAREIVKEEATRCGMPYVDYRWLGGMLTNYKTIRQSIKRLKELEERLENEENL 173
Query: 295 -KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L R++ KL+ + GIKNM +PD +F+IDV + + AV EA +L I ++G+
Sbjct: 174 VGMTKKEILNLMREKEKLSANLAGIKNMGSLPDVLFVIDVEHERNAVQEANRLGITVLGI 233
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
VDTN SPD I++VIPGNDD+ ++I LY K I D +DA++V EL+
Sbjct: 234 VDTNASPDNIDHVIPGNDDAIRAIRLYCKAIADTIIDARSVLELQ 278
>gi|300724795|ref|YP_003714120.1| 30S ribosomal protein S2 [Xenorhabdus nematophila ATCC 19061]
gi|297631337|emb|CBJ92032.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC
19061]
Length = 241
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNGALAELNKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I + A+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAIKDAALSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ ++ L++A
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLTAV------ATAVREGRSQDLA--VQAEEGLVDA 240
>gi|340361772|ref|ZP_08684186.1| stringent starvation protein A [Neisseria macacae ATCC 33926]
gi|349610301|ref|ZP_08889656.1| hypothetical protein HMPREF1028_01631 [Neisseria sp. GT4A_CT1]
gi|419795707|ref|ZP_14321291.1| putative stringent starvation protein A [Neisseria sicca VK64]
gi|339888192|gb|EGQ77668.1| stringent starvation protein A [Neisseria macacae ATCC 33926]
gi|348610184|gb|EGY59882.1| hypothetical protein HMPREF1028_01631 [Neisseria sp. GT4A_CT1]
gi|385700228|gb|EIG30481.1| putative stringent starvation protein A [Neisseria sicca VK64]
Length = 201
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 145/178 (81%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F +++LEN N T+ K +ARE I + L LAP F KNKY+
Sbjct: 85 VMRGRGRLVLFRMEKELFSLVHVLENP-NSTN-KEMAKAREAIGNGLTMLAPAFTKNKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLD+Y I L KSA+PL+KYAERIF R +++E++TPAEK M+
Sbjct: 143 LGDDFSMIDVALSPLLWRLDHYDIKLGKSAAPLLKYAERIFQREAFIEAMTPAEKAMR 200
>gi|417370963|ref|ZP_12141670.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417403059|ref|ZP_12157595.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353609411|gb|EHC62723.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353628920|gb|EHC76849.1| SSU ribosomal protein S2p [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 233
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 1 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKGKIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 61 FVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFEK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 121 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++++LY + A TV E RS+ LA + +++ +EA
Sbjct: 181 TNSDPDGVDFVIPGNDDAIRAVSLYLGAV------AATVREGRSQDLAS--QAEESFVEA 232
>gi|312883808|ref|ZP_07743527.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368557|gb|EFP96090.1| 30S ribosomal protein S2 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 242
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 166/239 (69%), Gaps = 7/239 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALADLAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNYKTVRQSIKRLKELEGQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
TN +PDG++Y+IPGNDD+ +++ LY A +V E R+K +A E K +E
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAA------AASVTEGRNKDVAEAAE-KDGFVE 240
>gi|167624895|ref|YP_001675189.1| 30S ribosomal protein S2 [Shewanella halifaxensis HAW-EB4]
gi|189044996|sp|B0TP83.1|RS2_SHEHH RecName: Full=30S ribosomal protein S2
gi|167354917|gb|ABZ77530.1| ribosomal protein S2 [Shewanella halifaxensis HAW-EB4]
Length = 242
Score = 239 bits (610), Expect = 5e-60, Method: Composition-based stats.
Identities = 112/213 (52%), Positives = 152/213 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +
Sbjct: 8 EMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR A I AV ++D RWLGG+LTN+KT++ SI+RLK+++ +G+
Sbjct: 68 LFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VV
Sbjct: 128 KLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
DTN SPDGINY+IPGNDD+ +SI LYT + A
Sbjct: 188 DTNSSPDGINYIIPGNDDAMRSIRLYTGSVAAA 220
>gi|229507666|ref|ZP_04397171.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286]
gi|229512139|ref|ZP_04401618.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33]
gi|229513902|ref|ZP_04403364.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21]
gi|229519274|ref|ZP_04408717.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9]
gi|229522206|ref|ZP_04411623.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80]
gi|229524263|ref|ZP_04413668.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis
VL426]
gi|229528737|ref|ZP_04418127.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)]
gi|254849390|ref|ZP_05238740.1| 30S ribosomal protein S2 [Vibrio cholerae MO10]
gi|298500365|ref|ZP_07010170.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757]
gi|229332511|gb|EEN97997.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 12129(1)]
gi|229337844|gb|EEO02861.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae bv. albensis
VL426]
gi|229341131|gb|EEO06136.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TM 11079-80]
gi|229343963|gb|EEO08938.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC9]
gi|229349083|gb|EEO14040.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae TMA 21]
gi|229352104|gb|EEO17045.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae B33]
gi|229355171|gb|EEO20092.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae BX 330286]
gi|229369825|gb|ACQ60248.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae MJ-1236]
gi|254845095|gb|EET23509.1| 30S ribosomal protein S2 [Vibrio cholerae MO10]
gi|297541058|gb|EFH77112.1| SSU ribosomal protein S2 [Vibrio cholerae MAK 757]
Length = 253
Score = 239 bits (610), Expect = 5e-60, Method: Composition-based stats.
Identities = 119/257 (46%), Positives = 175/257 (68%), Gaps = 11/257 (4%)
Query: 163 RPSYMESLTPAEKIMQ----AGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A M+ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+
Sbjct: 3 RPNPIEDFKMASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
+A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 EALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLKE+++ T+G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID +
Sbjct: 123 KRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
A+ EA L IP+ VVDTN SPDG++Y+IPGNDD+ +++ LY A+ + E R
Sbjct: 183 AIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + E K +EA
Sbjct: 237 NKDVAAVAE-KDGFVEA 252
>gi|378578216|ref|ZP_09826896.1| 30S ribosomal subunit protein S2 [Pantoea stewartii subsp.
stewartii DC283]
gi|377819325|gb|EHU02405.1| 30S ribosomal subunit protein S2 [Pantoea stewartii subsp.
stewartii DC283]
Length = 241
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 159/232 (68%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+W PKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN PDG++YVIPGNDD+ ++I LY + A TV E RS+ LA E
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAINLYLTAV------ATTVREGRSQDLAEQAE 234
>gi|331640623|ref|ZP_08341771.1| ribosomal protein S2 [Escherichia coli H736]
gi|331671677|ref|ZP_08372475.1| ribosomal protein S2 [Escherichia coli TA280]
gi|331040369|gb|EGI12576.1| ribosomal protein S2 [Escherichia coli H736]
gi|331071522|gb|EGI42879.1| ribosomal protein S2 [Escherichia coli TA280]
Length = 306
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 74 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 133
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 134 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 193
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 194 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 253
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA + +++ +EA
Sbjct: 254 TNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQDLAS--QAEESFVEA 305
>gi|164454441|dbj|BAF96777.1| ribosomal protein S2 [Shewanella livingstonensis]
Length = 311
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 167/271 (61%), Gaps = 19/271 (7%)
Query: 136 LWRLDYYGINLSKSASPLIKYAERIFS--------RPSYMESLTPAEKI----------- 176
+WR Y INL+ + FS + LTP K+
Sbjct: 19 IWRSLYMAINLNTKSHTYRHIFRGAFSFLTEVRKSKHGMRGGLTPYIKVNTMTTVSMRDM 78
Query: 177 MQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLLF 236
+QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +LF
Sbjct: 79 LQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKKGKVLF 138
Query: 237 VGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKL 296
VGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ KL
Sbjct: 139 VGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDKL 198
Query: 297 SKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDT 356
+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVDT
Sbjct: 199 TKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVDT 258
Query: 357 NHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
N +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 259 NSAPDGVNYIVPGNDDAMRAIRLYTSSVAAA 289
>gi|403234772|ref|ZP_10913358.1| 30S ribosomal protein S2 [Bacillus sp. 10403023]
Length = 232
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 162/224 (72%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA R+GM F++QRWLGG LTNF+TI+ I+RLK+++
Sbjct: 62 GNGGTMLFVGTKKQAQDSVKEEAERSGMYFVNQRWLGGTLTNFETIQKRIKRLKDIEKMQ 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++ +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFDVLPKKEVVQLKKELERLEKFLGGIKDMKQLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PI+G+VDTN PD I+YVIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEAK 225
>gi|331651074|ref|ZP_08352102.1| ribosomal protein S2 [Escherichia coli M718]
gi|331051528|gb|EGI23577.1| ribosomal protein S2 [Escherichia coli M718]
Length = 306
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 74 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 133
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 134 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 193
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 194 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 253
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA + +++ +EA
Sbjct: 254 TNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQDLAS--QAEESFVEA 305
>gi|400405642|ref|YP_006588501.1| 30S ribosomal protein S2 [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400364005|gb|AFP85073.1| ribosomal protein S2 [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 241
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 157/227 (69%), Gaps = 6/227 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLE+TL M+ +AI + +L KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMQPFIFGARNKVHIINLEQTLPMFNEAITALRKLAARKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAATEAVKEAGKSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEMQSEDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIKNM +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRMRELSKLENSLGGIKNMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTL 402
TN +PDG+++VIPGNDD+ ++I LY + A TV RS+ L
Sbjct: 189 TNANPDGVDFVIPGNDDAIRAIKLYLTAV------ANTVRAGRSQDL 229
>gi|378768472|ref|YP_005196945.1| 30S ribosomal protein S2 [Pantoea ananatis LMG 5342]
gi|386014737|ref|YP_005933014.1| 30S ribosomal protein S2 [Pantoea ananatis AJ13355]
gi|386080593|ref|YP_005994118.1| 30S ribosomal protein S2 [Pantoea ananatis PA13]
gi|327392796|dbj|BAK10218.1| 30S ribosomal protein S2 RpsB [Pantoea ananatis AJ13355]
gi|354989774|gb|AER33898.1| 30S ribosomal protein S2 [Pantoea ananatis PA13]
gi|365187958|emb|CCF10908.1| 30S ribosomal protein S2 [Pantoea ananatis LMG 5342]
Length = 241
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+W PKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ F++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN PDG++YVIPGNDD+ ++I LY + A TV E RS+ LA E
Sbjct: 189 TNSDPDGVDYVIPGNDDAIRAINLYLTAV------ATTVREGRSQDLAEQAE 234
>gi|148265753|ref|YP_001232459.1| 30S ribosomal protein S2 [Geobacter uraniireducens Rf4]
gi|189044940|sp|A5G7W8.1|RS2_GEOUR RecName: Full=30S ribosomal protein S2
gi|146399253|gb|ABQ27886.1| SSU ribosomal protein S2P [Geobacter uraniireducens Rf4]
Length = 256
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 159/228 (69%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ S T
Sbjct: 7 KELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKGAYNFVVDAAQSGET 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ ++ EA R GM +++ RWLGG+LTNF T+K SI RLK +D + +G+I
Sbjct: 67 MLFVGTKKQAQDSVSEEAQRCGMFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAMVADGTI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+KKEAL + + KL + +GGIK MN +P +F+ID + AVSEA KL IP++ +
Sbjct: 127 EAYTKKEALQMEKDRQKLEKTLGGIKGMNKLPGVLFVIDPKNEEIAVSEAKKLGIPVVAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKT 401
VDTN PD I+YVIPGNDD+ ++I L T + DA ++ ++ +T
Sbjct: 187 VDTNCDPDDIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNIKLQT 234
>gi|119774276|ref|YP_927016.1| 30S ribosomal protein S2 [Shewanella amazonensis SB2B]
gi|119766776|gb|ABL99346.1| SSU ribosomal protein S2P [Shewanella amazonensis SB2B]
Length = 258
Score = 239 bits (609), Expect = 7e-60, Method: Composition-based stats.
Identities = 109/207 (52%), Positives = 151/207 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 25 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKIL 84
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 85 FVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQSVDGTFDK 144
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+I + A+ EA L IP++ VVD
Sbjct: 145 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLGIPVVAVVD 204
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTK 382
TN SPDG+NY++PGNDD+ ++I LYT+
Sbjct: 205 TNASPDGVNYIVPGNDDAMRAIRLYTE 231
>gi|127513563|ref|YP_001094760.1| 30S ribosomal protein S2 [Shewanella loihica PV-4]
gi|166226753|sp|A3QGA3.1|RS2_SHELP RecName: Full=30S ribosomal protein S2
gi|126638858|gb|ABO24501.1| SSU ribosomal protein S2P [Shewanella loihica PV-4]
Length = 242
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 150/209 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD IF+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGI 384
TN SPDGINY++PGNDD+ ++I LY + +
Sbjct: 189 TNSSPDGINYIVPGNDDAMRAIRLYAESV 217
>gi|407791703|ref|ZP_11138783.1| 30S ribosomal protein S2 [Gallaecimonas xiamenensis 3-C-1]
gi|407199180|gb|EKE69201.1| 30S ribosomal protein S2 [Gallaecimonas xiamenensis 3-C-1]
Length = 240
Score = 239 bits (609), Expect = 8e-60, Method: Composition-based stats.
Identities = 107/217 (49%), Positives = 154/217 (70%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLE+TL M+ A+ Y+ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTLPMFHDALNYLSSVAGKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A G +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAANSCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL R+ KL + +GGIK+M +PD +F+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALDLTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++YV+PGNDD+ ++I LY + DAK
Sbjct: 189 TNSNPDGVDYVVPGNDDAIRAIQLYVGAVAATVNDAK 225
>gi|238754807|ref|ZP_04616158.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473]
gi|238706967|gb|EEP99333.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473]
Length = 241
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNQALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKESANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ ++I LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAIKLYLGAV------ATAVREGRSQDLA--VQAEESFVEA 240
>gi|328954580|ref|YP_004371914.1| 30S ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109]
gi|328454904|gb|AEB10733.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109]
Length = 281
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 165/236 (69%), Gaps = 4/236 (1%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S+T E +++AGVHFGHQTR WNPKM YIFG RN I+II+L+KT+ +++ A ++ +
Sbjct: 1 MSSVTMKE-LLEAGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVQLFKVAFDFVTE 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
S G +LFVGTK+QA+ I EA R GM F++ RWLGG+LTNF+TIK SI RLK +
Sbjct: 60 RVASGGKMLFVGTKKQAQDAIFEEANRCGMFFVNHRWLGGMLTNFQTIKKSIDRLKNFEQ 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+GSI++ KKE L +K KL++ +GGIKNMN +PDA+F++D AV EA K+
Sbjct: 120 MKEDGSIKRFPKKEILTMEKKAAKLDKSLGGIKNMNGLPDAVFVVDPHKENIAVQEARKM 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTL 402
IP++ +VD+N P I+YVIPGNDD+ ++I L T I +A L+ + +LR++ L
Sbjct: 180 QIPVVAIVDSNCDPTEIDYVIPGNDDAIRAIRLITSRIANACLEGQ---KLRAERL 232
>gi|307129820|ref|YP_003881836.1| 30S ribosomal protein S2 [Dickeya dadantii 3937]
gi|306527349|gb|ADM97279.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937]
Length = 241
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEALL R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++Y+IPGNDD+ ++++LY + A V E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDYIIPGNDDAIRAVSLYLGAV------ATAVREGRSQDLAE--QAEESFVEA 240
>gi|440289032|ref|YP_007341797.1| ribosomal protein S2 [Enterobacteriaceae bacterium strain FGI 57]
gi|440048554|gb|AGB79612.1| ribosomal protein S2 [Enterobacteriaceae bacterium strain FGI 57]
Length = 241
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 164/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISARKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + A TV E RS LA + +++ +EA
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAVTLYLSAV------AATVREGRSSDLAS--QAEESFVEA 240
>gi|417949101|ref|ZP_12592240.1| 30S ribosomal protein S2 [Vibrio splendidus ATCC 33789]
gi|342808709|gb|EGU43853.1| 30S ribosomal protein S2 [Vibrio splendidus ATCC 33789]
Length = 243
Score = 238 bits (608), Expect = 9e-60, Method: Composition-based stats.
Identities = 117/240 (48%), Positives = 166/240 (69%), Gaps = 6/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ I + G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAEIAKAGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + AV + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAVNSNQFYVNNRWLGGMLTNYKTVRQSIKRLKELEAQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +++ LY +A V E R+K +A + K +EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRAVQLYLNAAAEA------VKEGRNKDVAAVAAEKDGFVEA 242
>gi|344199453|ref|YP_004783779.1| uridylate kinase [Acidithiobacillus ferrivorans SS3]
gi|343774897|gb|AEM47453.1| uridylate kinase [Acidithiobacillus ferrivorans SS3]
Length = 241
Score = 238 bits (608), Expect = 9e-60, Method: Composition-based stats.
Identities = 116/233 (49%), Positives = 166/233 (71%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
YS +LK GEALM Y ++ +++ + EI ++ G+++AIVIGGGNI RG++
Sbjct: 6 YSRILLKLS--GEALMGDGQYGVDREVVQRMAREIKDVSDTGVQVAIVIGGGNIFRGMAK 63
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+ +DR+TADYMGMLAT++N+LA+ D L G+ + V+SA+ IE+ E YI AI++L
Sbjct: 64 AAEGMDRATADYMGMLATVMNALAVQDALEHLGLPTRVLSALHIEQVAEPYIRRRAIRHL 123
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VVIF G GNPFFTTDT A+LRA EI AE++LK TKVDG+Y DP A+ Y++
Sbjct: 124 EKGRVVIFGAGTGNPFFTTDTAASLRAVEINAEVVLKGTKVDGVYTDDPVTHPEAMRYRE 183
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+++ +V+ + L++MD+TA + CRD +PI VFSI KSGAL RV+ G+ EGT V
Sbjct: 184 LSYSQVLEQNLQVMDATAITLCRDNDMPIIVFSINKSGALMRVMLGEEEGTSV 236
>gi|196234715|ref|ZP_03133526.1| uridylate kinase [Chthoniobacter flavus Ellin428]
gi|196221223|gb|EDY15782.1| uridylate kinase [Chthoniobacter flavus Ellin428]
Length = 252
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 169/252 (67%), Gaps = 6/252 (2%)
Query: 571 KPIALSSDQIPKKIIEKEYSLAVLKAQQLGEAL-MKGDAYNINSSIIKNIISEISEIVSC 629
KP A S + K ++ +Y VLK GEAL +G NI+ I+ + ++I E+
Sbjct: 3 KPTARSKNA---KSLKPKYKRIVLKLS--GEALKARGSMDNISPEIVHQVCTQIKEVHEL 57
Query: 630 GIELAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSA 689
G+E+A+VIGGGNI RG+S + ++R+TADYMGMLAT+IN LAL L + G+ + V +A
Sbjct: 58 GVEVAVVIGGGNIWRGLSAHHRGMERATADYMGMLATVINGLALQSALEQMGMTTRVHTA 117
Query: 690 ISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKV 749
I ++ E +I AI L E K+VIF G GNPFF+TDTTAALRA EI AE+ILKATKV
Sbjct: 118 IRMDNVAEPFIRRRAIDQLNERKIVIFVAGTGNPFFSTDTTAALRANEIGAEVILKATKV 177
Query: 750 DGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALK 809
DGIY +DP K A Y +IT+ E + K+L +MDSTAFS C D K+PI VF ++KS +K
Sbjct: 178 DGIYTADPFKDPKATKYDRITYSEALGKRLSVMDSTAFSLCMDNKMPIIVFDMMKSDNIK 237
Query: 810 RVIEGKNEGTLV 821
RV+ GK GTLV
Sbjct: 238 RVVLGKAVGTLV 249
>gi|322420126|ref|YP_004199349.1| 30S ribosomal protein S2 [Geobacter sp. M18]
gi|320126513|gb|ADW14073.1| ribosomal protein S2 [Geobacter sp. M18]
Length = 255
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 157/230 (68%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ S T
Sbjct: 7 KELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDAAQSGDT 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ +A EA R G F++ RWLGG+LTNF T+K SI RLK +D I +G+I
Sbjct: 67 VLFVGTKKQAQDSVAEEAQRCGQFFVNDRWLGGMLTNFSTVKQSIDRLKRLDAMIADGTI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+KKE L +++ KL + +GGIK M +P +F++D + AVSEA KL IP++ +
Sbjct: 127 EAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLGIPVVAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
VDTN PD INYVIPGNDD+ ++I L T + DA L+ R +T A
Sbjct: 187 VDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGAQARNARLQTGA 236
>gi|284008520|emb|CBA75043.1| 30S ribosomal protein S2 [Arsenophonus nasoniae]
Length = 241
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 157/228 (68%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +YIFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKTYIFGVRNKVHIINLEKTVPMFNEALAELTKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAIKEAANGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELSKLENSLGGIKEMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG++Y+IPGNDD+ +++ LY + AK V E RS+ A
Sbjct: 189 TNSDPDGVDYIIPGNDDAIRAVKLYLDAV------AKAVHEGRSQDQA 230
>gi|392541356|ref|ZP_10288493.1| 30S ribosomal protein S2 [Pseudoalteromonas piscicida JCM 20779]
gi|409202189|ref|ZP_11230392.1| 30S ribosomal protein S2 [Pseudoalteromonas flavipulchra JG1]
Length = 242
Score = 238 bits (608), Expect = 1e-59, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 159/217 (73%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLEKT+ M+ A++++ + +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLQNVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDAIF+ID + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMLTREMQKLEKGLGGIKDMGGLPDAIFVIDADHEHIAIREANNLGIPVVSVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++++IPGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDFIIPGNDDAIRAIQLYTGAVATAITEGR 225
>gi|262166337|ref|ZP_06034074.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223]
gi|262170771|ref|ZP_06038449.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451]
gi|449143612|ref|ZP_21774435.1| 30S ribosomal protein S2 [Vibrio mimicus CAIM 602]
gi|261891847|gb|EEY37833.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus MB-451]
gi|262026053|gb|EEY44721.1| SSU ribosomal protein S2p (SAe) [Vibrio mimicus VM223]
gi|449080610|gb|EMB51521.1| 30S ribosomal protein S2 [Vibrio mimicus CAIM 602]
Length = 242
Score = 238 bits (608), Expect = 1e-59, Method: Composition-based stats.
Identities = 114/240 (47%), Positives = 171/240 (71%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY + +A + E R+K +A + E K +EA
Sbjct: 189 TNSSPDGVDYIIPGNDDAIRAVQLYLNAVAEA------INEGRNKDVAVVAE-KDGFVEA 241
>gi|349575364|ref|ZP_08887283.1| stringent starvation protein A [Neisseria shayeganii 871]
gi|348013125|gb|EGY52050.1| stringent starvation protein A [Neisseria shayeganii 871]
Length = 201
Score = 238 bits (608), Expect = 1e-59, Method: Composition-based stats.
Identities = 110/178 (61%), Positives = 141/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDL+L+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDVFNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H +LE+ ++S K +ARE I L LAP F KNKY+
Sbjct: 85 VMRGRGRLVLFRMEKELFSHAQVLESP--ESSAKEQAKAREAISQGLTLLAPAFAKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLD+Y I L KSA+P++KYAERIF R S++ +LT AEK M+
Sbjct: 143 LGDDFSMIDVALSPLLWRLDHYDIKLGKSAAPILKYAERIFQRESFIAALTAAEKAMR 200
>gi|238751451|ref|ZP_04612943.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380]
gi|238796608|ref|ZP_04640115.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969]
gi|238710318|gb|EEQ02544.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380]
gi|238719586|gb|EEQ11395.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969]
Length = 241
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLSAV------ATAVNEGRSQDLA--VQAEESFVEA 240
>gi|300715396|ref|YP_003740199.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661]
gi|299061232|emb|CAX58341.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661]
Length = 241
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 164/239 (68%), Gaps = 6/239 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
VGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 IVGTKRAASESVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
TN PDG++++IPGNDD+ ++++LY + A TV E RS+ LA E K A E
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVSLYLTAV------ATTVREGRSQDLAQQAEEKFAEAE 241
>gi|23099041|ref|NP_692507.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831]
gi|38258375|sp|Q8EQV3.1|RS2_OCEIH RecName: Full=30S ribosomal protein S2
gi|22777269|dbj|BAC13542.1| 30S ribosomal protein S2 [Oceanobacillus iheyensis HTE831]
Length = 254
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 160/219 (73%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A Y+ ++ + GT
Sbjct: 7 KQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNYVKEIASNGGT 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ + +EA+R+GM F++QRWLGG LTNF+TI+ I RLK ++ +G+
Sbjct: 67 ILFVGTKKQAQDSVRDEAIRSGMYFVNQRWLGGTLTNFQTIRKRINRLKSIEKMEEDGTF 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L KKE + +++ +L + +GGIK MN +PDA+F+ID + A++EA KLNIPIIG+
Sbjct: 127 EVLPKKEVVNLLKEKERLVKFLGGIKEMNKLPDALFVIDPRKERIAIAEAHKLNIPIIGI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN PD I+YVIP NDD+ +++ L T + DA L+ K
Sbjct: 187 VDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAILEVK 225
>gi|294635118|ref|ZP_06713629.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685]
gi|451965798|ref|ZP_21919054.1| 30S ribosomal protein S2 [Edwardsiella tarda NBRC 105688]
gi|291091495|gb|EFE24056.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685]
gi|451315370|dbj|GAC64416.1| 30S ribosomal protein S2 [Edwardsiella tarda NBRC 105688]
Length = 241
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 161/232 (69%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN PDG+++VIPGNDD+ +++ LY + +A V E RS+ LA E
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEA------VREGRSQDLASQAE 234
>gi|365921588|ref|ZP_09445854.1| ribosomal protein S2 [Cardiobacterium valvarum F0432]
gi|364575779|gb|EHM53147.1| ribosomal protein S2 [Cardiobacterium valvarum F0432]
Length = 260
Score = 238 bits (607), Expect = 1e-59, Method: Composition-based stats.
Identities = 115/241 (47%), Positives = 164/241 (68%), Gaps = 5/241 (2%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++ +AG HFGH+TRFWNPKM+ YI+G R IHIINLEKT+ M A+ ++ + S GT+
Sbjct: 8 ELFEAGAHFGHRTRFWNPKMAPYIYGKRGDIHIINLEKTVPMLNDALNFVGTVVASGGTV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR A + A R GMP+++ RWLGG++TNFKTI+ SI RL+ ++ +G+ +
Sbjct: 68 MFVGTKRSASEAVGTAAARCGMPYVNFRWLGGMMTNFKTIRQSINRLEAIERMAEDGTFQ 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKE ++ R++ KL R + GI++M +PD +FIIDVG+ AV EA KL IP++G+V
Sbjct: 128 KLVKKEVIVLGRERDKLARSLTGIRHMRRLPDVLFIIDVGHEHIAVQEARKLGIPVVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
DTN+ +G++Y+IPGNDDS ++I LY + D +AK S T +KAL E
Sbjct: 188 DTNNLLEGVDYIIPGNDDSVRAINLYVNAVADTIQEAKA-----SVTTGGGENAEKALEE 242
Query: 415 A 415
A
Sbjct: 243 A 243
>gi|359446683|ref|ZP_09236334.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20439]
gi|358039489|dbj|GAA72583.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20439]
Length = 242
Score = 238 bits (607), Expect = 1e-59, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLE+T+ M+ A++++ +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSSAAANKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDAIF+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPVVAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y++PGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGR 225
>gi|262066279|ref|ZP_06025891.1| UMP kinase [Fusobacterium periodonticum ATCC 33693]
gi|294783616|ref|ZP_06748940.1| UMP kinase [Fusobacterium sp. 1_1_41FAA]
gi|291379974|gb|EFE87492.1| UMP kinase [Fusobacterium periodonticum ATCC 33693]
gi|294480494|gb|EFG28271.1| UMP kinase [Fusobacterium sp. 1_1_41FAA]
Length = 239
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM + I+S +I + +I EIV G+E++IVIGGGNI RGIS Q +DR T D
Sbjct: 15 GEALMGEQEFGISSDVITSYAKQIKEIVDLGVEVSIVIGGGNIFRGISGAAQGVDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT+INSLAL + + K G+ + V +AI + K E +I A ++LE+G+VVIF G
Sbjct: 75 HMGMLATVINSLALQNSIEKLGVQTRVQTAIEMPKVAEPFIKRRAQRHLEKGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT AALRA E++ ++++KATKVDGIY+ DP K A Y+K+T++EV++K L
Sbjct: 135 TGNPYFTTDTAAALRAIEMETDVVIKATKVDGIYDKDPVKFADAKKYEKVTYNEVLAKDL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA S CR+ KLPI VF+ + G LKRVI G+N GT V
Sbjct: 195 KVMDATAISLCRENKLPIIVFNSLIEGNLKRVIMGENIGTTV 236
>gi|254226778|ref|ZP_04920352.1| ribosomal protein S2 [Vibrio cholerae V51]
gi|125620716|gb|EAZ49076.1| ribosomal protein S2, partial [Vibrio cholerae V51]
Length = 256
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 160/225 (71%), Gaps = 4/225 (1%)
Query: 159 RIFSRPSYMESLTPAE----KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTL 214
R RP+ +E A ++ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+
Sbjct: 32 RGMWRPNPIEDFKMASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTV 91
Query: 215 YMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTI 274
M+ +A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT+
Sbjct: 92 PMFNEALAELAKVGEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTV 151
Query: 275 KTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVG 334
+ SI+RLKE+++ T+G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID
Sbjct: 152 RQSIKRLKELEVQSTDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDAD 211
Query: 335 YHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIAL 379
+ A+ EA L IP+ VVDTN SPDG++Y+IPGNDD+ +++ L
Sbjct: 212 HEHIAIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQL 256
>gi|238792755|ref|ZP_04636386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909]
gi|238727863|gb|EEQ19386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909]
Length = 241
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLNAV------ATAVTEGRSQDLA--VQAEESFVEA 240
>gi|51597318|ref|YP_071509.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953]
gi|108806515|ref|YP_650431.1| 30S ribosomal protein S2 [Yersinia pestis Antiqua]
gi|108813117|ref|YP_648884.1| 30S ribosomal protein S2 [Yersinia pestis Nepal516]
gi|145598951|ref|YP_001163027.1| 30S ribosomal protein S2 [Yersinia pestis Pestoides F]
gi|149366955|ref|ZP_01888988.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125]
gi|153947133|ref|YP_001399997.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758]
gi|161484768|ref|NP_670436.2| 30S ribosomal protein S2 [Yersinia pestis KIM10+]
gi|161511344|ref|NP_994114.2| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str.
91001]
gi|162420294|ref|YP_001607772.1| 30S ribosomal protein S2 [Yersinia pestis Angola]
gi|165927142|ref|ZP_02222974.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011898|ref|ZP_02232796.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211704|ref|ZP_02237739.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419541|ref|ZP_02311294.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425321|ref|ZP_02317074.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170023315|ref|YP_001719820.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis YPIII]
gi|186896423|ref|YP_001873535.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+]
gi|218928212|ref|YP_002346087.1| 30S ribosomal protein S2 [Yersinia pestis CO92]
gi|229837751|ref|ZP_04457911.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A]
gi|229840973|ref|ZP_04461132.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843074|ref|ZP_04463224.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903559|ref|ZP_04518672.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516]
gi|384121501|ref|YP_005504121.1| 30S ribosomal protein S2 [Yersinia pestis D106004]
gi|384125675|ref|YP_005508289.1| 30S ribosomal protein S2 [Yersinia pestis D182038]
gi|384141089|ref|YP_005523791.1| 30S ribosomal protein S2 [Yersinia pestis A1122]
gi|384413674|ref|YP_005623036.1| 30S ribosomal protein S2 [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420545664|ref|ZP_15043743.1| ribosomal protein S2 [Yersinia pestis PY-01]
gi|420550970|ref|ZP_15048491.1| ribosomal protein S2 [Yersinia pestis PY-02]
gi|420562067|ref|ZP_15058263.1| ribosomal protein S2 [Yersinia pestis PY-04]
gi|420567091|ref|ZP_15062802.1| ribosomal protein S2 [Yersinia pestis PY-05]
gi|420583423|ref|ZP_15077626.1| ribosomal protein S2 [Yersinia pestis PY-08]
gi|420605053|ref|ZP_15097040.1| ribosomal protein S2 [Yersinia pestis PY-12]
gi|420610400|ref|ZP_15101873.1| ribosomal protein S2 [Yersinia pestis PY-13]
gi|420615715|ref|ZP_15106580.1| ribosomal protein S2 [Yersinia pestis PY-14]
gi|420621122|ref|ZP_15111349.1| ribosomal protein S2 [Yersinia pestis PY-15]
gi|420636459|ref|ZP_15125181.1| ribosomal protein S2 [Yersinia pestis PY-25]
gi|420642058|ref|ZP_15130238.1| ribosomal protein S2 [Yersinia pestis PY-29]
gi|420652843|ref|ZP_15140010.1| ribosomal protein S2 [Yersinia pestis PY-34]
gi|420668661|ref|ZP_15154243.1| ribosomal protein S2 [Yersinia pestis PY-45]
gi|420679491|ref|ZP_15164081.1| ribosomal protein S2 [Yersinia pestis PY-47]
gi|420684736|ref|ZP_15168784.1| ribosomal protein S2 [Yersinia pestis PY-48]
gi|420689920|ref|ZP_15173377.1| ribosomal protein S2 [Yersinia pestis PY-52]
gi|420707123|ref|ZP_15187950.1| ribosomal protein S2 [Yersinia pestis PY-55]
gi|420723427|ref|ZP_15202278.1| ribosomal protein S2 [Yersinia pestis PY-59]
gi|420729053|ref|ZP_15207301.1| ribosomal protein S2 [Yersinia pestis PY-60]
gi|420777468|ref|ZP_15249838.1| ribosomal protein S2 [Yersinia pestis PY-88]
gi|420782990|ref|ZP_15254673.1| ribosomal protein S2 [Yersinia pestis PY-89]
gi|420788343|ref|ZP_15259389.1| ribosomal protein S2 [Yersinia pestis PY-90]
gi|420793817|ref|ZP_15264330.1| ribosomal protein S2 [Yersinia pestis PY-91]
gi|420798936|ref|ZP_15268935.1| ribosomal protein S2 [Yersinia pestis PY-92]
gi|420809545|ref|ZP_15278514.1| ribosomal protein S2 [Yersinia pestis PY-94]
gi|420815236|ref|ZP_15283611.1| ribosomal protein S2 [Yersinia pestis PY-95]
gi|420831287|ref|ZP_15298076.1| ribosomal protein S2 [Yersinia pestis PY-99]
gi|420841274|ref|ZP_15307104.1| ribosomal protein S2 [Yersinia pestis PY-101]
gi|420846891|ref|ZP_15312175.1| ribosomal protein S2 [Yersinia pestis PY-102]
gi|421762494|ref|ZP_16199291.1| 30S ribosomal protein S2 [Yersinia pestis INS]
gi|25009213|sp|Q8ZH66.1|RS2_YERPE RecName: Full=30S ribosomal protein S2
gi|61215491|sp|Q667I9.1|RS2_YERPS RecName: Full=30S ribosomal protein S2
gi|122979779|sp|Q1CAN6.1|RS2_YERPA RecName: Full=30S ribosomal protein S2
gi|122980004|sp|Q1CFE6.1|RS2_YERPN RecName: Full=30S ribosomal protein S2
gi|166226769|sp|A4TL92.1|RS2_YERPP RecName: Full=30S ribosomal protein S2
gi|167011240|sp|A7FFG9.1|RS2_YERP3 RecName: Full=30S ribosomal protein S2
gi|238687288|sp|A9R396.1|RS2_YERPG RecName: Full=30S ribosomal protein S2
gi|238688486|sp|B1JQG0.1|RS2_YERPY RecName: Full=30S ribosomal protein S2
gi|238691339|sp|B2JZ34.1|RS2_YERPB RecName: Full=30S ribosomal protein S2
gi|51590600|emb|CAH22241.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953]
gi|108776765|gb|ABG19284.1| SSU ribosomal protein S2P [Yersinia pestis Nepal516]
gi|108778428|gb|ABG12486.1| SSU ribosomal protein S2P [Yersinia pestis Antiqua]
gi|115346823|emb|CAL19709.1| 30S ribosomal protein S2 [Yersinia pestis CO92]
gi|145210647|gb|ABP40054.1| SSU ribosomal protein S2P [Yersinia pestis Pestoides F]
gi|149290569|gb|EDM40645.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125]
gi|152958628|gb|ABS46089.1| ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758]
gi|162353109|gb|ABX87057.1| ribosomal protein S2 [Yersinia pestis Angola]
gi|165921038|gb|EDR38262.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989164|gb|EDR41465.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207475|gb|EDR51955.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962282|gb|EDR58303.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055721|gb|EDR65505.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749849|gb|ACA67367.1| ribosomal protein S2 [Yersinia pseudotuberculosis YPIII]
gi|186699449|gb|ACC90078.1| ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+]
gi|229679329|gb|EEO75432.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516]
gi|229689950|gb|EEO82009.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697339|gb|EEO87386.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704128|gb|EEO91140.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A]
gi|262361097|gb|ACY57818.1| 30S ribosomal protein S2 [Yersinia pestis D106004]
gi|262365339|gb|ACY61896.1| 30S ribosomal protein S2 [Yersinia pestis D182038]
gi|320014178|gb|ADV97749.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342856218|gb|AEL74771.1| 30S ribosomal protein S2 [Yersinia pestis A1122]
gi|391429974|gb|EIQ91755.1| ribosomal protein S2 [Yersinia pestis PY-01]
gi|391431127|gb|EIQ92737.1| ribosomal protein S2 [Yersinia pestis PY-02]
gi|391446184|gb|EIR06247.1| ribosomal protein S2 [Yersinia pestis PY-04]
gi|391446792|gb|EIR06787.1| ribosomal protein S2 [Yersinia pestis PY-05]
gi|391463607|gb|EIR21999.1| ribosomal protein S2 [Yersinia pestis PY-08]
gi|391480385|gb|EIR37062.1| ribosomal protein S2 [Yersinia pestis PY-12]
gi|391494229|gb|EIR49483.1| ribosomal protein S2 [Yersinia pestis PY-13]
gi|391495405|gb|EIR50508.1| ribosomal protein S2 [Yersinia pestis PY-15]
gi|391498134|gb|EIR52927.1| ribosomal protein S2 [Yersinia pestis PY-14]
gi|391515091|gb|EIR68140.1| ribosomal protein S2 [Yersinia pestis PY-25]
gi|391525736|gb|EIR77851.1| ribosomal protein S2 [Yersinia pestis PY-29]
gi|391528590|gb|EIR80392.1| ribosomal protein S2 [Yersinia pestis PY-34]
gi|391544985|gb|EIR95131.1| ribosomal protein S2 [Yersinia pestis PY-45]
gi|391559650|gb|EIS08384.1| ribosomal protein S2 [Yersinia pestis PY-47]
gi|391561237|gb|EIS09789.1| ribosomal protein S2 [Yersinia pestis PY-48]
gi|391574283|gb|EIS21210.1| ribosomal protein S2 [Yersinia pestis PY-52]
gi|391586668|gb|EIS31946.1| ribosomal protein S2 [Yersinia pestis PY-55]
gi|391603610|gb|EIS46775.1| ribosomal protein S2 [Yersinia pestis PY-60]
gi|391605166|gb|EIS48084.1| ribosomal protein S2 [Yersinia pestis PY-59]
gi|391659105|gb|EIS95441.1| ribosomal protein S2 [Yersinia pestis PY-88]
gi|391664033|gb|EIS99805.1| ribosomal protein S2 [Yersinia pestis PY-89]
gi|391666072|gb|EIT01584.1| ribosomal protein S2 [Yersinia pestis PY-90]
gi|391672017|gb|EIT06898.1| ribosomal protein S2 [Yersinia pestis PY-91]
gi|391685593|gb|EIT19111.1| ribosomal protein S2 [Yersinia pestis PY-92]
gi|391686543|gb|EIT19953.1| ribosomal protein S2 [Yersinia pestis PY-94]
gi|391698273|gb|EIT30595.1| ribosomal protein S2 [Yersinia pestis PY-95]
gi|391712377|gb|EIT43263.1| ribosomal protein S2 [Yersinia pestis PY-99]
gi|391719046|gb|EIT49223.1| ribosomal protein S2 [Yersinia pestis PY-101]
gi|391729903|gb|EIT58836.1| ribosomal protein S2 [Yersinia pestis PY-102]
gi|411176700|gb|EKS46715.1| 30S ribosomal protein S2 [Yersinia pestis INS]
Length = 241
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLGAV------ATAVREGRSQDLA--VQAEESFVEA 240
>gi|365157166|ref|ZP_09353447.1| 30S ribosomal protein S2 [Bacillus smithii 7_3_47FAA]
gi|363625900|gb|EHL76911.1| 30S ribosomal protein S2 [Bacillus smithii 7_3_47FAA]
Length = 242
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 161/224 (71%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A +++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFQERNGIYIIDLQKTVKKVEEAYQFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R+GM +++ RWLGG LTNF+TI+ +QRLK+++
Sbjct: 62 ANGGKVLFVGTKKQAQESVKEEAERSGMYYVNHRWLGGTLTNFQTIQKRVQRLKDIERME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++ +L + +GGIK+M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGTFDVLPKKEVVQLKKEHERLVKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAILEAK 225
>gi|26106512|gb|AAN78698.1|AE016755_198 30S ribosomal protein S2 [Escherichia coli CFT073]
gi|91070812|gb|ABE05693.1| 30S ribosomal protein S2 [Escherichia coli UTI89]
Length = 307
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 116/254 (45%), Positives = 172/254 (67%), Gaps = 12/254 (4%)
Query: 166 YMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAI 221
Y+E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+
Sbjct: 61 YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL 120
Query: 222 RYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRL 281
+ ++ KG +LFVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RL
Sbjct: 121 AELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL 180
Query: 282 KEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVS 341
K+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+
Sbjct: 181 KDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK 240
Query: 342 EAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKT 401
EA L IP+ +VDTN PDG+++VIPGNDD+ +++ LY + A TV E RS+
Sbjct: 241 EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQD 294
Query: 402 LAPIMECKKALIEA 415
LA + +++ +EA
Sbjct: 295 LAS--QAEESFVEA 306
>gi|308185740|ref|YP_003929871.1| 30S ribosomal protein S2 [Pantoea vagans C9-1]
gi|308056250|gb|ADO08422.1| 30S ribosomal protein S2 [Pantoea vagans C9-1]
Length = 257
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/232 (47%), Positives = 160/232 (68%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 25 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKIL 84
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
VGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 85 IVGTKRAAAEAVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 144
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 145 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 204
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA E
Sbjct: 205 TNSDPDGVDFVIPGNDDAIRAVNLYLTAV------ATTVREGRSQDLAEQAE 250
>gi|189425764|ref|YP_001952941.1| 30S ribosomal protein S2 [Geobacter lovleyi SZ]
gi|238692130|sp|B3E716.1|RS2_GEOLS RecName: Full=30S ribosomal protein S2
gi|189422023|gb|ACD96421.1| ribosomal protein S2 [Geobacter lovleyi SZ]
Length = 257
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 162/231 (70%), Gaps = 4/231 (1%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S++ E +++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ ++ A ++ +
Sbjct: 1 MSSISMKE-LLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKE 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
T+LFVGTK+QA+ +A EA R G +++QRWLGG+LTNF T+K SI+RLK++D
Sbjct: 60 SAEQGNTVLFVGTKKQAQDSVAEEATRCGQYYVNQRWLGGMLTNFSTVKQSIERLKKLDA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+I +KKEAL +++ KL +V+GGIKNMN +P +F+ID + AV EA KL
Sbjct: 120 MFEDGTIEAYTKKEALKMDKEREKLEKVLGGIKNMNKLPGMMFVIDPKNEEIAVQEAKKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAF---LDAKTV 394
IP++ +VDTN PD I++VIPGNDD+ ++I L T I DA DA+ V
Sbjct: 180 GIPVVAIVDTNCDPDMIDHVIPGNDDAIRAIRLLTAKIADAVQEGADARNV 230
>gi|312111649|ref|YP_003989965.1| 30S ribosomal protein S2 [Geobacillus sp. Y4.1MC1]
gi|336236024|ref|YP_004588640.1| 30S ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93]
gi|423720568|ref|ZP_17694750.1| 30S ribosomal protein S2 [Geobacillus thermoglucosidans TNO-09.020]
gi|311216750|gb|ADP75354.1| ribosomal protein S2 [Geobacillus sp. Y4.1MC1]
gi|335362879|gb|AEH48559.1| ribosomal protein S2 [Geobacillus thermoglucosidasius C56-YS93]
gi|383365921|gb|EID43212.1| 30S ribosomal protein S2 [Geobacillus thermoglucosidans TNO-09.020]
Length = 235
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 157/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A + +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFAKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RLKE++
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G L KKE + ++Q +L + +GGIK M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGIFDVLPKKEVIRLKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|424637328|ref|ZP_18075336.1| ribosomal protein S2 [Vibrio cholerae HC-55A1]
gi|424660763|ref|ZP_18098010.1| ribosomal protein S2 [Vibrio cholerae HE-16]
gi|408023116|gb|EKG60296.1| ribosomal protein S2 [Vibrio cholerae HC-55A1]
gi|408050136|gb|EKG85309.1| ribosomal protein S2 [Vibrio cholerae HE-16]
Length = 234
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/240 (47%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 1 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 61 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 121 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY A+ + E R+K +A + E K +EA
Sbjct: 181 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGRNKDVAAVAE-KDGFVEA 233
>gi|15642258|ref|NP_231891.1| 30S ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121729757|ref|ZP_01682196.1| ribosomal protein S2 [Vibrio cholerae V52]
gi|147673418|ref|YP_001217775.1| 30S ribosomal protein S2 [Vibrio cholerae O395]
gi|153217369|ref|ZP_01951120.1| ribosomal protein S2 [Vibrio cholerae 1587]
gi|153803016|ref|ZP_01957602.1| ribosomal protein S2 [Vibrio cholerae MZO-3]
gi|153823642|ref|ZP_01976309.1| ribosomal protein S2 [Vibrio cholerae B33]
gi|153827572|ref|ZP_01980239.1| ribosomal protein S2 [Vibrio cholerae MZO-2]
gi|153828232|ref|ZP_01980899.1| ribosomal protein S2 [Vibrio cholerae 623-39]
gi|227082384|ref|YP_002810935.1| 30S ribosomal protein S2 [Vibrio cholerae M66-2]
gi|227118706|ref|YP_002820602.1| ribosomal protein S2 [Vibrio cholerae O395]
gi|254286068|ref|ZP_04961029.1| ribosomal protein S2 [Vibrio cholerae AM-19226]
gi|255747044|ref|ZP_05420989.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101]
gi|262161412|ref|ZP_06030522.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1]
gi|262168261|ref|ZP_06035958.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27]
gi|360036136|ref|YP_004937899.1| 30S ribosomal protein S2 [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742064|ref|YP_005334033.1| 30S ribosomal protein S2 [Vibrio cholerae IEC224]
gi|394895090|ref|YP_002877818.2| 30S ribosomal protein S2 [Vibrio cholerae MJ-1236]
gi|417814287|ref|ZP_12460940.1| ribosomal protein S2 [Vibrio cholerae HC-49A2]
gi|417825494|ref|ZP_12472082.1| ribosomal protein S2 [Vibrio cholerae HE48]
gi|418338878|ref|ZP_12947772.1| ribosomal protein S2 [Vibrio cholerae HC-23A1]
gi|418346802|ref|ZP_12951560.1| ribosomal protein S2 [Vibrio cholerae HC-28A1]
gi|418350564|ref|ZP_12955295.1| ribosomal protein S2 [Vibrio cholerae HC-43A1]
gi|418355875|ref|ZP_12958594.1| ribosomal protein S2 [Vibrio cholerae HC-61A1]
gi|419837967|ref|ZP_14361405.1| ribosomal protein S2 [Vibrio cholerae HC-46B1]
gi|421317943|ref|ZP_15768511.1| ribosomal protein S2 [Vibrio cholerae CP1032(5)]
gi|421325818|ref|ZP_15776342.1| ribosomal protein S2 [Vibrio cholerae CP1041(14)]
gi|421333432|ref|ZP_15783909.1| ribosomal protein S2 [Vibrio cholerae CP1046(19)]
gi|421336974|ref|ZP_15787435.1| ribosomal protein S2 [Vibrio cholerae CP1048(21)]
gi|421347925|ref|ZP_15798302.1| ribosomal protein S2 [Vibrio cholerae HC-46A1]
gi|421351979|ref|ZP_15802344.1| ribosomal protein S2 [Vibrio cholerae HE-25]
gi|421354959|ref|ZP_15805291.1| ribosomal protein S2 [Vibrio cholerae HE-45]
gi|422308200|ref|ZP_16395353.1| ribosomal protein S2 [Vibrio cholerae CP1035(8)]
gi|422897357|ref|ZP_16934801.1| ribosomal protein S2 [Vibrio cholerae HC-40A1]
gi|422903555|ref|ZP_16938525.1| ribosomal protein S2 [Vibrio cholerae HC-48A1]
gi|422907440|ref|ZP_16942238.1| ribosomal protein S2 [Vibrio cholerae HC-70A1]
gi|422911098|ref|ZP_16945726.1| ribosomal protein S2 [Vibrio cholerae HE-09]
gi|422914284|ref|ZP_16948789.1| ribosomal protein S2 [Vibrio cholerae HFU-02]
gi|422918098|ref|ZP_16952416.1| ribosomal protein S2 [Vibrio cholerae HC-02A1]
gi|422923563|ref|ZP_16956710.1| ribosomal protein S2 [Vibrio cholerae BJG-01]
gi|422926488|ref|ZP_16959501.1| ribosomal protein S2 [Vibrio cholerae HC-38A1]
gi|423145810|ref|ZP_17133404.1| ribosomal protein S2 [Vibrio cholerae HC-19A1]
gi|423150486|ref|ZP_17137800.1| ribosomal protein S2 [Vibrio cholerae HC-21A1]
gi|423154305|ref|ZP_17141486.1| ribosomal protein S2 [Vibrio cholerae HC-22A1]
gi|423157388|ref|ZP_17144481.1| ribosomal protein S2 [Vibrio cholerae HC-32A1]
gi|423735924|ref|ZP_17709116.1| ribosomal protein S2 [Vibrio cholerae HC-41B1]
gi|423769091|ref|ZP_17713229.1| ribosomal protein S2 [Vibrio cholerae HC-50A2]
gi|423883593|ref|ZP_17724404.1| ribosomal protein S2 [Vibrio cholerae HC-60A1]
gi|423931485|ref|ZP_17731825.1| ribosomal protein S2 [Vibrio cholerae HC-77A1]
gi|424003238|ref|ZP_17746313.1| ribosomal protein S2 [Vibrio cholerae HC-17A2]
gi|424007029|ref|ZP_17749999.1| ribosomal protein S2 [Vibrio cholerae HC-37A1]
gi|424025009|ref|ZP_17764659.1| ribosomal protein S2 [Vibrio cholerae HC-62B1]
gi|424027895|ref|ZP_17767497.1| ribosomal protein S2 [Vibrio cholerae HC-69A1]
gi|424587175|ref|ZP_18026753.1| ribosomal protein S2 [Vibrio cholerae CP1030(3)]
gi|424591967|ref|ZP_18031391.1| ribosomal protein S2 [Vibrio cholerae CP1037(10)]
gi|424595827|ref|ZP_18035146.1| ribosomal protein S2 [Vibrio cholerae CP1040(13)]
gi|424599740|ref|ZP_18038918.1| ribosomal protein S2 [Vibrio Cholerae CP1044(17)]
gi|424607434|ref|ZP_18046375.1| ribosomal protein S2 [Vibrio cholerae CP1050(23)]
gi|424611252|ref|ZP_18050091.1| ribosomal protein S2 [Vibrio cholerae HC-39A1]
gi|424618041|ref|ZP_18056712.1| ribosomal protein S2 [Vibrio cholerae HC-42A1]
gi|424630207|ref|ZP_18068491.1| ribosomal protein S2 [Vibrio cholerae HC-51A1]
gi|424634251|ref|ZP_18072351.1| ribosomal protein S2 [Vibrio cholerae HC-52A1]
gi|424641236|ref|ZP_18079119.1| ribosomal protein S2 [Vibrio cholerae HC-56A1]
gi|424645788|ref|ZP_18083523.1| ribosomal protein S2 [Vibrio cholerae HC-56A2]
gi|424649304|ref|ZP_18086967.1| ribosomal protein S2 [Vibrio cholerae HC-57A1]
gi|424653559|ref|ZP_18090939.1| ribosomal protein S2 [Vibrio cholerae HC-57A2]
gi|429888047|ref|ZP_19369546.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae PS15]
gi|440710499|ref|ZP_20891147.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 4260B]
gi|443504606|ref|ZP_21071562.1| ribosomal protein S2 [Vibrio cholerae HC-64A1]
gi|443508507|ref|ZP_21075268.1| ribosomal protein S2 [Vibrio cholerae HC-65A1]
gi|443512351|ref|ZP_21078986.1| ribosomal protein S2 [Vibrio cholerae HC-67A1]
gi|443515905|ref|ZP_21082415.1| ribosomal protein S2 [Vibrio cholerae HC-68A1]
gi|443519699|ref|ZP_21086092.1| ribosomal protein S2 [Vibrio cholerae HC-71A1]
gi|443524590|ref|ZP_21090800.1| ribosomal protein S2 [Vibrio cholerae HC-72A2]
gi|443532184|ref|ZP_21098198.1| ribosomal protein S2 [Vibrio cholerae HC-7A1]
gi|443539525|ref|ZP_21105379.1| ribosomal protein S2 [Vibrio cholerae HC-81A1]
gi|449055283|ref|ZP_21733951.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae O1 str. Inaba
G4222]
gi|25009223|sp|Q9KPV2.1|RS2_VIBCH RecName: Full=30S ribosomal protein S2
gi|172047607|sp|A5F607.1|RS2_VIBC3 RecName: Full=30S ribosomal protein S2
gi|254764499|sp|C3LQ32.1|RS2_VIBCM RecName: Full=30S ribosomal protein S2
gi|9656822|gb|AAF95404.1| ribosomal protein S2 [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121628508|gb|EAX60994.1| ribosomal protein S2 [Vibrio cholerae V52]
gi|124113615|gb|EAY32435.1| ribosomal protein S2 [Vibrio cholerae 1587]
gi|124121459|gb|EAY40202.1| ribosomal protein S2 [Vibrio cholerae MZO-3]
gi|126518837|gb|EAZ76060.1| ribosomal protein S2 [Vibrio cholerae B33]
gi|146315301|gb|ABQ19840.1| ribosomal protein S2 [Vibrio cholerae O395]
gi|148876321|gb|EDL74456.1| ribosomal protein S2 [Vibrio cholerae 623-39]
gi|149737952|gb|EDM52857.1| ribosomal protein S2 [Vibrio cholerae MZO-2]
gi|150423978|gb|EDN15918.1| ribosomal protein S2 [Vibrio cholerae AM-19226]
gi|227010272|gb|ACP06484.1| ribosomal protein S2 [Vibrio cholerae M66-2]
gi|227014156|gb|ACP10366.1| ribosomal protein S2 [Vibrio cholerae O395]
gi|255735446|gb|EET90846.1| SSU ribosomal protein S2p (SAe) [Vibrio cholera CIRS 101]
gi|262023153|gb|EEY41857.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae RC27]
gi|262028723|gb|EEY47377.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae INDRE 91/1]
gi|340036773|gb|EGQ97749.1| ribosomal protein S2 [Vibrio cholerae HC-49A2]
gi|340046979|gb|EGR07909.1| ribosomal protein S2 [Vibrio cholerae HE48]
gi|341620495|gb|EGS46266.1| ribosomal protein S2 [Vibrio cholerae HC-48A1]
gi|341620631|gb|EGS46398.1| ribosomal protein S2 [Vibrio cholerae HC-70A1]
gi|341621240|gb|EGS46987.1| ribosomal protein S2 [Vibrio cholerae HC-40A1]
gi|341632470|gb|EGS57336.1| ribosomal protein S2 [Vibrio cholerae HE-09]
gi|341636526|gb|EGS61221.1| ribosomal protein S2 [Vibrio cholerae HFU-02]
gi|341636980|gb|EGS61674.1| ribosomal protein S2 [Vibrio cholerae HC-02A1]
gi|341643852|gb|EGS68114.1| ribosomal protein S2 [Vibrio cholerae BJG-01]
gi|341645878|gb|EGS70002.1| ribosomal protein S2 [Vibrio cholerae HC-38A1]
gi|356417808|gb|EHH71421.1| ribosomal protein S2 [Vibrio cholerae HC-21A1]
gi|356422648|gb|EHH76122.1| ribosomal protein S2 [Vibrio cholerae HC-19A1]
gi|356427997|gb|EHH81228.1| ribosomal protein S2 [Vibrio cholerae HC-22A1]
gi|356430520|gb|EHH83729.1| ribosomal protein S2 [Vibrio cholerae HC-23A1]
gi|356431786|gb|EHH84986.1| ribosomal protein S2 [Vibrio cholerae HC-28A1]
gi|356439278|gb|EHH92265.1| ribosomal protein S2 [Vibrio cholerae HC-32A1]
gi|356445060|gb|EHH97869.1| ribosomal protein S2 [Vibrio cholerae HC-43A1]
gi|356452373|gb|EHI05052.1| ribosomal protein S2 [Vibrio cholerae HC-61A1]
gi|356647290|gb|AET27345.1| 30S ribosomal protein S2 [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795574|gb|AFC59045.1| 30S ribosomal protein S2 [Vibrio cholerae IEC224]
gi|395916201|gb|EJH27031.1| ribosomal protein S2 [Vibrio cholerae CP1032(5)]
gi|395917656|gb|EJH28484.1| ribosomal protein S2 [Vibrio cholerae CP1041(14)]
gi|395928834|gb|EJH39587.1| ribosomal protein S2 [Vibrio cholerae CP1046(19)]
gi|395932073|gb|EJH42817.1| ribosomal protein S2 [Vibrio cholerae CP1048(21)]
gi|395942504|gb|EJH53180.1| ribosomal protein S2 [Vibrio cholerae HC-46A1]
gi|395952424|gb|EJH63038.1| ribosomal protein S2 [Vibrio cholerae HE-25]
gi|395954084|gb|EJH64697.1| ribosomal protein S2 [Vibrio cholerae HE-45]
gi|395958326|gb|EJH68822.1| ribosomal protein S2 [Vibrio cholerae HC-56A2]
gi|395958736|gb|EJH69207.1| ribosomal protein S2 [Vibrio cholerae HC-57A2]
gi|395961416|gb|EJH71744.1| ribosomal protein S2 [Vibrio cholerae HC-42A1]
gi|395972523|gb|EJH82113.1| ribosomal protein S2 [Vibrio cholerae CP1030(3)]
gi|408006603|gb|EKG44741.1| ribosomal protein S2 [Vibrio cholerae HC-39A1]
gi|408017614|gb|EKG55105.1| ribosomal protein S2 [Vibrio cholerae HC-52A1]
gi|408022721|gb|EKG59916.1| ribosomal protein S2 [Vibrio cholerae HC-56A1]
gi|408030036|gb|EKG66717.1| ribosomal protein S2 [Vibrio cholerae CP1037(10)]
gi|408031196|gb|EKG67833.1| ribosomal protein S2 [Vibrio cholerae CP1040(13)]
gi|408032020|gb|EKG68619.1| ribosomal protein S2 [Vibrio cholerae HC-57A1]
gi|408041097|gb|EKG77237.1| ribosomal protein S2 [Vibrio Cholerae CP1044(17)]
gi|408042425|gb|EKG78477.1| ribosomal protein S2 [Vibrio cholerae CP1050(23)]
gi|408054175|gb|EKG89161.1| ribosomal protein S2 [Vibrio cholerae HC-51A1]
gi|408618065|gb|EKK91154.1| ribosomal protein S2 [Vibrio cholerae CP1035(8)]
gi|408629350|gb|EKL02049.1| ribosomal protein S2 [Vibrio cholerae HC-41B1]
gi|408633368|gb|EKL05729.1| ribosomal protein S2 [Vibrio cholerae HC-50A2]
gi|408640659|gb|EKL12447.1| ribosomal protein S2 [Vibrio cholerae HC-60A1]
gi|408653712|gb|EKL24867.1| ribosomal protein S2 [Vibrio cholerae HC-77A1]
gi|408844883|gb|EKL85006.1| ribosomal protein S2 [Vibrio cholerae HC-37A1]
gi|408845772|gb|EKL85887.1| ribosomal protein S2 [Vibrio cholerae HC-17A2]
gi|408856515|gb|EKL96210.1| ribosomal protein S2 [Vibrio cholerae HC-46B1]
gi|408869853|gb|EKM09140.1| ribosomal protein S2 [Vibrio cholerae HC-62B1]
gi|408878518|gb|EKM17519.1| ribosomal protein S2 [Vibrio cholerae HC-69A1]
gi|429224923|gb|EKY31231.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae PS15]
gi|439973828|gb|ELP50032.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae 4260B]
gi|443431077|gb|ELS73631.1| ribosomal protein S2 [Vibrio cholerae HC-64A1]
gi|443434915|gb|ELS81061.1| ribosomal protein S2 [Vibrio cholerae HC-65A1]
gi|443438739|gb|ELS88457.1| ribosomal protein S2 [Vibrio cholerae HC-67A1]
gi|443442842|gb|ELS96145.1| ribosomal protein S2 [Vibrio cholerae HC-68A1]
gi|443446698|gb|ELT03357.1| ribosomal protein S2 [Vibrio cholerae HC-71A1]
gi|443449448|gb|ELT09742.1| ribosomal protein S2 [Vibrio cholerae HC-72A2]
gi|443457574|gb|ELT24971.1| ribosomal protein S2 [Vibrio cholerae HC-7A1]
gi|443465625|gb|ELT40285.1| ribosomal protein S2 [Vibrio cholerae HC-81A1]
gi|448265325|gb|EMB02560.1| SSU ribosomal protein S2p (SAe) [Vibrio cholerae O1 str. Inaba
G4222]
Length = 242
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/240 (47%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY A+ + E R+K +A + E K +EA
Sbjct: 189 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGRNKDVAAVAE-KDGFVEA 241
>gi|284799414|ref|ZP_05983928.2| stringent starvation protein A [Neisseria subflava NJ9703]
gi|284797795|gb|EFC53142.1| stringent starvation protein A [Neisseria subflava NJ9703]
Length = 177
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 1 MDFEIKDVDVFNKPEDLALMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F + +LEN +++ K +ARE I + L LAP F KNKY+
Sbjct: 61 VMRGRGRLVLYRMEKELFSLVQVLENP--ESTNKEQAKAREAIGNGLTLLAPSFTKNKYI 118
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLDYY I L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 119 LGDDFSMIDVALSPLLWRLDYYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 176
>gi|417818024|ref|ZP_12464653.1| ribosomal protein S2 [Vibrio cholerae HCUF01]
gi|417821591|ref|ZP_12468205.1| ribosomal protein S2 [Vibrio cholerae HE39]
gi|418335269|ref|ZP_12944180.1| ribosomal protein S2 [Vibrio cholerae HC-06A1]
gi|419827218|ref|ZP_14350717.1| ribosomal protein S2 [Vibrio cholerae CP1033(6)]
gi|419830709|ref|ZP_14354194.1| ribosomal protein S2 [Vibrio cholerae HC-1A2]
gi|419834392|ref|ZP_14357847.1| ribosomal protein S2 [Vibrio cholerae HC-61A2]
gi|421322016|ref|ZP_15772569.1| ribosomal protein S2 [Vibrio cholerae CP1038(11)]
gi|421329476|ref|ZP_15779986.1| ribosomal protein S2 [Vibrio cholerae CP1042(15)]
gi|421340402|ref|ZP_15790834.1| ribosomal protein S2 [Vibrio cholerae HC-20A2]
gi|421344094|ref|ZP_15794497.1| ribosomal protein S2 [Vibrio cholerae HC-43B1]
gi|423160959|ref|ZP_17147899.1| ribosomal protein S2 [Vibrio cholerae HC-33A2]
gi|423165786|ref|ZP_17152510.1| ribosomal protein S2 [Vibrio cholerae HC-48B2]
gi|423823000|ref|ZP_17717010.1| ribosomal protein S2 [Vibrio cholerae HC-55C2]
gi|423856965|ref|ZP_17720817.1| ribosomal protein S2 [Vibrio cholerae HC-59A1]
gi|423895953|ref|ZP_17727432.1| ribosomal protein S2 [Vibrio cholerae HC-62A1]
gi|423957566|ref|ZP_17735309.1| ribosomal protein S2 [Vibrio cholerae HE-40]
gi|423985546|ref|ZP_17738860.1| ribosomal protein S2 [Vibrio cholerae HE-46]
gi|423998523|ref|ZP_17741775.1| ribosomal protein S2 [Vibrio cholerae HC-02C1]
gi|424010262|ref|ZP_17753196.1| ribosomal protein S2 [Vibrio cholerae HC-44C1]
gi|424017420|ref|ZP_17757249.1| ribosomal protein S2 [Vibrio cholerae HC-55B2]
gi|424020345|ref|ZP_17760128.1| ribosomal protein S2 [Vibrio cholerae HC-59B1]
gi|424602501|ref|ZP_18041641.1| ribosomal protein S2 [Vibrio cholerae CP1047(20)]
gi|424614067|ref|ZP_18052852.1| ribosomal protein S2 [Vibrio cholerae HC-41A1]
gi|424622825|ref|ZP_18061330.1| ribosomal protein S2 [Vibrio cholerae HC-47A1]
gi|424625719|ref|ZP_18064180.1| ribosomal protein S2 [Vibrio cholerae HC-50A1]
gi|424657378|ref|ZP_18094663.1| ribosomal protein S2 [Vibrio cholerae HC-81A2]
gi|443528221|ref|ZP_21094265.1| ribosomal protein S2 [Vibrio cholerae HC-78A1]
gi|443535992|ref|ZP_21101863.1| ribosomal protein S2 [Vibrio cholerae HC-80A1]
gi|340037747|gb|EGQ98722.1| ribosomal protein S2 [Vibrio cholerae HCUF01]
gi|340039222|gb|EGR00197.1| ribosomal protein S2 [Vibrio cholerae HE39]
gi|356416645|gb|EHH70270.1| ribosomal protein S2 [Vibrio cholerae HC-06A1]
gi|356444236|gb|EHH97048.1| ribosomal protein S2 [Vibrio cholerae HC-33A2]
gi|356450287|gb|EHI03017.1| ribosomal protein S2 [Vibrio cholerae HC-48B2]
gi|395919010|gb|EJH29834.1| ribosomal protein S2 [Vibrio cholerae CP1038(11)]
gi|395928010|gb|EJH38773.1| ribosomal protein S2 [Vibrio cholerae CP1042(15)]
gi|395939685|gb|EJH50367.1| ribosomal protein S2 [Vibrio cholerae HC-20A2]
gi|395940174|gb|EJH50855.1| ribosomal protein S2 [Vibrio cholerae HC-43B1]
gi|395970364|gb|EJH80135.1| ribosomal protein S2 [Vibrio cholerae HC-47A1]
gi|395975179|gb|EJH84676.1| ribosomal protein S2 [Vibrio cholerae CP1047(20)]
gi|408011660|gb|EKG49467.1| ribosomal protein S2 [Vibrio cholerae HC-50A1]
gi|408011827|gb|EKG49628.1| ribosomal protein S2 [Vibrio cholerae HC-41A1]
gi|408052499|gb|EKG87538.1| ribosomal protein S2 [Vibrio cholerae HC-81A2]
gi|408608008|gb|EKK81411.1| ribosomal protein S2 [Vibrio cholerae CP1033(6)]
gi|408620482|gb|EKK93494.1| ribosomal protein S2 [Vibrio cholerae HC-1A2]
gi|408634976|gb|EKL07211.1| ribosomal protein S2 [Vibrio cholerae HC-55C2]
gi|408640312|gb|EKL12108.1| ribosomal protein S2 [Vibrio cholerae HC-59A1]
gi|408649214|gb|EKL20531.1| ribosomal protein S2 [Vibrio cholerae HC-61A2]
gi|408654655|gb|EKL25790.1| ribosomal protein S2 [Vibrio cholerae HC-62A1]
gi|408656599|gb|EKL27693.1| ribosomal protein S2 [Vibrio cholerae HE-40]
gi|408663663|gb|EKL34525.1| ribosomal protein S2 [Vibrio cholerae HE-46]
gi|408852422|gb|EKL92250.1| ribosomal protein S2 [Vibrio cholerae HC-02C1]
gi|408859549|gb|EKL99206.1| ribosomal protein S2 [Vibrio cholerae HC-55B2]
gi|408863292|gb|EKM02782.1| ribosomal protein S2 [Vibrio cholerae HC-44C1]
gi|408866922|gb|EKM06293.1| ribosomal protein S2 [Vibrio cholerae HC-59B1]
gi|443453479|gb|ELT17302.1| ribosomal protein S2 [Vibrio cholerae HC-78A1]
gi|443460882|gb|ELT31962.1| ribosomal protein S2 [Vibrio cholerae HC-80A1]
Length = 237
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/240 (47%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++ AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 4 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 64 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 124 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN SPDG++Y+IPGNDD+ +++ LY A+ + E R+K +A + E K +EA
Sbjct: 184 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGRNKDVAAVAE-KDGFVEA 236
>gi|294503061|ref|YP_003567123.1| 30S ribosomal protein S2 [Yersinia pestis Z176003]
gi|420556478|ref|ZP_15053368.1| ribosomal protein S2 [Yersinia pestis PY-03]
gi|420572757|ref|ZP_15067949.1| ribosomal protein S2 [Yersinia pestis PY-06]
gi|420578089|ref|ZP_15072775.1| ribosomal protein S2 [Yersinia pestis PY-07]
gi|420588575|ref|ZP_15082268.1| ribosomal protein S2 [Yersinia pestis PY-09]
gi|420593893|ref|ZP_15087062.1| ribosomal protein S2 [Yersinia pestis PY-10]
gi|420599576|ref|ZP_15092143.1| ribosomal protein S2 [Yersinia pestis PY-11]
gi|420626171|ref|ZP_15115923.1| ribosomal protein S2 [Yersinia pestis PY-16]
gi|420631355|ref|ZP_15120615.1| ribosomal protein S2 [Yersinia pestis PY-19]
gi|420647185|ref|ZP_15134931.1| ribosomal protein S2 [Yersinia pestis PY-32]
gi|420658347|ref|ZP_15144960.1| ribosomal protein S2 [Yersinia pestis PY-36]
gi|420673946|ref|ZP_15159051.1| ribosomal protein S2 [Yersinia pestis PY-46]
gi|420695722|ref|ZP_15178452.1| ribosomal protein S2 [Yersinia pestis PY-53]
gi|420701098|ref|ZP_15183055.1| ribosomal protein S2 [Yersinia pestis PY-54]
gi|420712420|ref|ZP_15192725.1| ribosomal protein S2 [Yersinia pestis PY-56]
gi|420717824|ref|ZP_15197462.1| ribosomal protein S2 [Yersinia pestis PY-58]
gi|420734104|ref|ZP_15211858.1| ribosomal protein S2 [Yersinia pestis PY-61]
gi|420739575|ref|ZP_15216789.1| ribosomal protein S2 [Yersinia pestis PY-63]
gi|420744910|ref|ZP_15221487.1| ribosomal protein S2 [Yersinia pestis PY-64]
gi|420750701|ref|ZP_15226438.1| ribosomal protein S2 [Yersinia pestis PY-65]
gi|420755966|ref|ZP_15231012.1| ribosomal protein S2 [Yersinia pestis PY-66]
gi|420761832|ref|ZP_15235795.1| ribosomal protein S2 [Yersinia pestis PY-71]
gi|420767063|ref|ZP_15240515.1| ribosomal protein S2 [Yersinia pestis PY-72]
gi|420772052|ref|ZP_15244996.1| ribosomal protein S2 [Yersinia pestis PY-76]
gi|420804284|ref|ZP_15273746.1| ribosomal protein S2 [Yersinia pestis PY-93]
gi|420820413|ref|ZP_15288298.1| ribosomal protein S2 [Yersinia pestis PY-96]
gi|420825510|ref|ZP_15292853.1| ribosomal protein S2 [Yersinia pestis PY-98]
gi|420836132|ref|ZP_15302446.1| ribosomal protein S2 [Yersinia pestis PY-100]
gi|420852311|ref|ZP_15316949.1| ribosomal protein S2 [Yersinia pestis PY-103]
gi|420857825|ref|ZP_15321639.1| ribosomal protein S2 [Yersinia pestis PY-113]
gi|294353520|gb|ADE63861.1| 30S ribosomal protein S2 [Yersinia pestis Z176003]
gi|391433529|gb|EIQ94856.1| ribosomal protein S2 [Yersinia pestis PY-03]
gi|391450717|gb|EIR10318.1| ribosomal protein S2 [Yersinia pestis PY-06]
gi|391462291|gb|EIR20818.1| ribosomal protein S2 [Yersinia pestis PY-07]
gi|391465597|gb|EIR23776.1| ribosomal protein S2 [Yersinia pestis PY-09]
gi|391479015|gb|EIR35857.1| ribosomal protein S2 [Yersinia pestis PY-10]
gi|391480123|gb|EIR36828.1| ribosomal protein S2 [Yersinia pestis PY-11]
gi|391510221|gb|EIR63778.1| ribosomal protein S2 [Yersinia pestis PY-16]
gi|391510965|gb|EIR64420.1| ribosomal protein S2 [Yersinia pestis PY-19]
gi|391529446|gb|EIR81130.1| ribosomal protein S2 [Yersinia pestis PY-32]
gi|391542259|gb|EIR92734.1| ribosomal protein S2 [Yersinia pestis PY-36]
gi|391559085|gb|EIS07900.1| ribosomal protein S2 [Yersinia pestis PY-46]
gi|391574852|gb|EIS21679.1| ribosomal protein S2 [Yersinia pestis PY-53]
gi|391587214|gb|EIS32409.1| ribosomal protein S2 [Yersinia pestis PY-54]
gi|391590190|gb|EIS34974.1| ribosomal protein S2 [Yersinia pestis PY-56]
gi|391603935|gb|EIS47050.1| ribosomal protein S2 [Yersinia pestis PY-58]
gi|391617996|gb|EIS59484.1| ribosomal protein S2 [Yersinia pestis PY-61]
gi|391618552|gb|EIS59954.1| ribosomal protein S2 [Yersinia pestis PY-63]
gi|391625565|gb|EIS66039.1| ribosomal protein S2 [Yersinia pestis PY-64]
gi|391629627|gb|EIS69529.1| ribosomal protein S2 [Yersinia pestis PY-65]
gi|391641022|gb|EIS79498.1| ribosomal protein S2 [Yersinia pestis PY-71]
gi|391643629|gb|EIS81781.1| ribosomal protein S2 [Yersinia pestis PY-72]
gi|391643721|gb|EIS81858.1| ribosomal protein S2 [Yersinia pestis PY-66]
gi|391653267|gb|EIS90249.1| ribosomal protein S2 [Yersinia pestis PY-76]
gi|391684243|gb|EIT17941.1| ribosomal protein S2 [Yersinia pestis PY-93]
gi|391701916|gb|EIT33865.1| ribosomal protein S2 [Yersinia pestis PY-96]
gi|391702857|gb|EIT34693.1| ribosomal protein S2 [Yersinia pestis PY-98]
gi|391718718|gb|EIT48935.1| ribosomal protein S2 [Yersinia pestis PY-100]
gi|391732822|gb|EIT61340.1| ribosomal protein S2 [Yersinia pestis PY-103]
gi|391736475|gb|EIT64493.1| ribosomal protein S2 [Yersinia pestis PY-113]
Length = 236
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 184 TNSDPDGVDFIIPGNDDAIRAVKLYLGAV------ATAVREGRSQDLA--VQAEESFVEA 235
>gi|410088375|ref|ZP_11285070.1| SSU ribosomal protein S2p (SAe) [Morganella morganii SC01]
gi|455738087|ref|YP_007504353.1| SSU ribosomal protein S2p (SAe) [Morganella morganii subsp.
morganii KT]
gi|409765297|gb|EKN49412.1| SSU ribosomal protein S2p (SAe) [Morganella morganii SC01]
gi|455419650|gb|AGG29980.1| SSU ribosomal protein S2p (SAe) [Morganella morganii subsp.
morganii KT]
Length = 239
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 158/228 (69%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVQEAAISCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG++++IPGNDD+ ++I LY + A +V E RS+ LA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAIKLYLGAV------ATSVREGRSQDLA 230
>gi|238784880|ref|ZP_04628880.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970]
gi|238787235|ref|ZP_04631034.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641]
gi|238714197|gb|EEQ06209.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970]
gi|238724497|gb|EEQ16138.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641]
Length = 241
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLSAV------ATAVNEGRSQDLA--VQAEESFVEA 240
>gi|225077126|ref|ZP_03720325.1| hypothetical protein NEIFLAOT_02179 [Neisseria flavescens
NRL30031/H210]
gi|224951537|gb|EEG32746.1| hypothetical protein NEIFLAOT_02179 [Neisseria flavescens
NRL30031/H210]
Length = 183
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 7 MDFEIKDVDVFNKPEDLALMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 66
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F + +LEN +++ K +ARE I + L LAP F KNKY+
Sbjct: 67 VMRGRGRLVLYRMEKELFSLVQVLENP--ESTNKEQAKAREAIGNGLTLLAPSFTKNKYI 124
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLDYY I L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 125 LGDDFSMIDVALSPLLWRLDYYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 182
>gi|291616345|ref|YP_003519087.1| 30S ribosomal protein S2 [Pantoea ananatis LMG 20103]
gi|291151375|gb|ADD75959.1| RpsB [Pantoea ananatis LMG 20103]
Length = 258
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 158/232 (68%), Gaps = 6/232 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+W PKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 26 MLKAGVHFGHQTRYWCPKMKPFIFGARNKVHIINLEKTVPMFNDALAELTKISSRKGKIL 85
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ F++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 86 FVGTKRAAAEAIKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKELETQSQDGTFDK 145
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 146 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 205
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
TN PDG++YVIPGNDD+ ++I LY + A TV E RS+ LA E
Sbjct: 206 TNSDPDGVDYVIPGNDDAIRAINLYLTAV------ATTVREGRSQDLAEQAE 251
>gi|444910051|ref|ZP_21230239.1| Uridylate kinase [Cystobacter fuscus DSM 2262]
gi|444719649|gb|ELW60441.1| Uridylate kinase [Cystobacter fuscus DSM 2262]
Length = 250
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 117/224 (52%), Positives = 160/224 (71%), Gaps = 2/224 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ + I SE+ E+V G+E+A+VIGGGNI RG++ + +DR++AD
Sbjct: 19 GEALMGEGKYGIHPPTLTRIASELKEVVQAGVEMAVVIGGGNIFRGVAGSTEGMDRASAD 78
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT INS+AL D L K G + V+SAI +E+ E YI A+++LE+G++VIFA G
Sbjct: 79 YMGMLATCINSMALQDALEKQGCHTRVLSAIKMEQIAEPYIRRRAVRHLEKGRIVIFAAG 138
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT A+LRA EI AE+ILKATKVDG+YN+DP K +A Y+ +T+ +V+ + L
Sbjct: 139 TGNPYFTTDTAASLRAMEINAEVILKATKVDGVYNADPKKDPAARRYRTLTYMDVLQQNL 198
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGK--NEGTLV 821
+MDSTA S C D KLPI VF + + G + + I G+ + GTLV
Sbjct: 199 NVMDSTAISLCMDNKLPIIVFDLTQRGNIAKAILGQLGDIGTLV 242
>gi|359437239|ref|ZP_09227309.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20311]
gi|392554176|ref|ZP_10301313.1| 30S ribosomal protein S2 [Pseudoalteromonas undina NCIMB 2128]
gi|358028063|dbj|GAA63558.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20311]
Length = 242
Score = 238 bits (606), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLE+T+ M+ A++++ +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGAAANKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDAIF+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPVVAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y++PGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGR 225
>gi|429091999|ref|ZP_19154648.1| SSU ribosomal protein S2p (SAe) [Cronobacter dublinensis 1210]
gi|426743312|emb|CCJ80761.1| SSU ribosomal protein S2p (SAe) [Cronobacter dublinensis 1210]
Length = 307
Score = 237 bits (605), Expect = 2e-59, Method: Composition-based stats.
Identities = 116/256 (45%), Positives = 172/256 (67%), Gaps = 12/256 (4%)
Query: 164 PSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEK 219
P++ E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +
Sbjct: 59 PNFTEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNE 118
Query: 220 AIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQ 279
A+ + ++ KG +LFVGTKR A + A F++ RWLGG+LTN+KT++ SI+
Sbjct: 119 ALAELSKISSRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIK 178
Query: 280 RLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGA 339
RLK+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A
Sbjct: 179 RLKDLETQSQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIA 238
Query: 340 VSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
+ EA L IP+ +VDTN PDG+++VIPGNDD+ ++++LY + A TV E RS
Sbjct: 239 IKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAV------AATVREGRS 292
Query: 400 KTLAPIMECKKALIEA 415
+ LA + +++ +EA
Sbjct: 293 QDLAA--QAEESFVEA 306
>gi|87123907|ref|ZP_01079757.1| uridylate kinase [Synechococcus sp. RS9917]
gi|86168476|gb|EAQ69733.1| uridylate kinase [Synechococcus sp. RS9917]
Length = 235
Score = 237 bits (605), Expect = 2e-59, Method: Composition-based stats.
Identities = 109/233 (46%), Positives = 169/233 (72%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
Y+ A+LK GEALM Y I+ +I+++I +++ +V+ G +LAIV+GGGNI RG+
Sbjct: 3 YARALLKLS--GEALMGDQGYGIDPAIVQSIAEDVARVVAGGTQLAIVVGGGNIFRGLKG 60
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+DR+TADY+GMLAT++N++ L D L ++G+ + V +AI++++ E YI AI++L
Sbjct: 61 SAAGMDRATADYVGMLATVMNAITLQDGLERAGVETRVQTAIAMQEMAEPYIRRKAIRHL 120
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VV+F G GNPFFTTDTTAALRAAEI A+++ KATKVDG+Y+ DPN +A+ Y
Sbjct: 121 EKGRVVVFGAGCGNPFFTTDTTAALRAAEISADVVFKATKVDGVYDRDPNVHANAVRYDH 180
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TF +V+S +L +MDSTA + C+D +PI VF++ + G + R + G++ G+ +
Sbjct: 181 LTFQQVLSGELAVMDSTAIALCKDNNIPIVVFNLFEPGNIGRAVAGESVGSRI 233
>gi|146328956|ref|YP_001209631.1| 30S ribosomal protein S2 [Dichelobacter nodosus VCS1703A]
gi|166225268|sp|A5EV13.1|RS2_DICNV RecName: Full=30S ribosomal protein S2
gi|146232426|gb|ABQ13404.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A]
Length = 267
Score = 237 bits (605), Expect = 2e-59, Method: Composition-based stats.
Identities = 106/223 (47%), Positives = 158/223 (70%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+ +AG HFGH+ RFWNPKM+ YI+G R IHIINLE+T+ M A+ ++ + + G ++
Sbjct: 9 LFEAGAHFGHRARFWNPKMAPYIYGKRGDIHIINLEQTVPMLNDALNFLSAVVGNGGRVM 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I+ A R GMP+++ RWLGG++TNFKTI+ SI+RL+E++ +G+ K
Sbjct: 69 FVGTKRSASDAISEAASRCGMPYVNFRWLGGMMTNFKTIRQSIRRLEEIEKMAEDGTYDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
LSKKE ++ R++ KL R + GI++M +PD +F++DVG+ + A+ EA+KL IP++GVVD
Sbjct: 129 LSKKEVIVLEREREKLARALTGIRSMKHLPDVLFVVDVGHERIAIQEAMKLGIPVVGVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
TN+ +G++Y+IPGNDDS ++I LY D AK +R
Sbjct: 189 TNNDIEGVDYIIPGNDDSVRAIRLYVNAAADTIEHAKAAAAVR 231
>gi|421493563|ref|ZP_15940919.1| RPSB [Morganella morganii subsp. morganii KT]
gi|400192313|gb|EJO25453.1| RPSB [Morganella morganii subsp. morganii KT]
Length = 234
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 158/228 (69%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVQEAAISCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG++++IPGNDD+ ++I LY + A +V E RS+ LA
Sbjct: 184 TNSDPDGVDFIIPGNDDAIRAIKLYLGAV------ATSVREGRSQDLA 225
>gi|337750016|ref|YP_004644178.1| protein PyrH [Paenibacillus mucilaginosus KNP414]
gi|379722865|ref|YP_005314996.1| protein PyrH [Paenibacillus mucilaginosus 3016]
gi|386725643|ref|YP_006191969.1| protein PyrH [Paenibacillus mucilaginosus K02]
gi|336301205|gb|AEI44308.1| PyrH [Paenibacillus mucilaginosus KNP414]
gi|378571537|gb|AFC31847.1| PyrH [Paenibacillus mucilaginosus 3016]
gi|384092768|gb|AFH64204.1| protein PyrH [Paenibacillus mucilaginosus K02]
Length = 240
Score = 237 bits (605), Expect = 2e-59, Method: Composition-based stats.
Identities = 125/237 (52%), Positives = 171/237 (72%), Gaps = 3/237 (1%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
Y VLK GEAL Y I+S +I +I ++ E+V +E+AIV+GGGNI RGI+
Sbjct: 6 YKRVVLKLS--GEALAGQQGYGIDSEVITSIAQQVKEVVDLKVEVAIVVGGGNIWRGIAG 63
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+ IDR+TADYMGMLAT++NSLAL D L G+ + V S+I++++ E YI AI++L
Sbjct: 64 SSKGIDRATADYMGMLATVMNSLALQDALETIGVPTRVQSSITMQQVAEPYIRRRAIRHL 123
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKA-TKVDGIYNSDPNKCLSAIIYK 767
E+G+VVIFA G GNPFF+TDTTAALRAAEI+AE+IL A KVDG+Y++DP K +AI Y
Sbjct: 124 EKGRVVIFAAGTGNPFFSTDTTAALRAAEIEAEVILMAKNKVDGVYSADPFKDSTAIKYD 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEI 824
+T+ EV++K L +MDSTA S C D +P+ VFSI +SG +KRV++G+ GT+V +
Sbjct: 184 TLTYLEVLNKNLGVMDSTASSLCMDNNIPLIVFSITESGNIKRVVQGEKIGTIVRSV 240
>gi|225077477|ref|ZP_03720676.1| hypothetical protein NEIFLAOT_02540 [Neisseria flavescens
NRL30031/H210]
gi|224951188|gb|EEG32397.1| hypothetical protein NEIFLAOT_02540 [Neisseria flavescens
NRL30031/H210]
Length = 302
Score = 237 bits (605), Expect = 2e-59, Method: Composition-based stats.
Identities = 127/235 (54%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 69 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 126
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 127 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 186
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 187 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 246
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K G+LKRVI G+NEGTLV+
Sbjct: 247 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGENEGTLVH 301
>gi|420663671|ref|ZP_15149719.1| ribosomal protein S2 [Yersinia pestis PY-42]
gi|391543996|gb|EIR94261.1| ribosomal protein S2 [Yersinia pestis PY-42]
Length = 233
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 1 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 60
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 61 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 120
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 121 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 180
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 181 TNSDPDGVDFIIPGNDDAIRAVKLYLGAV------ATAVREGRSQDLA--VQAEESFVEA 232
>gi|238763979|ref|ZP_04624935.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638]
gi|238697796|gb|EEP90557.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638]
Length = 241
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ ++ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVKLYLSAV------ATAVTEGRSQDLA--VQAEESFVEA 240
>gi|241760240|ref|ZP_04758336.1| stringent starvation protein A [Neisseria flavescens SK114]
gi|319639024|ref|ZP_07993782.1| RegF protein [Neisseria mucosa C102]
gi|241319351|gb|EER55816.1| stringent starvation protein A [Neisseria flavescens SK114]
gi|317399928|gb|EFV80591.1| RegF protein [Neisseria mucosa C102]
Length = 201
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 144/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDVFNKPEDLALMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F + +LEN +++ K +ARE I + L LAP F KNKY+
Sbjct: 85 VMRGRGRLVLYRMEKELFSLVQVLENP--ESTNKEQAKAREAIGNGLTLLAPSFAKNKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLDYY I L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 143 LGDDFSMIDVALSPLLWRLDYYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 200
>gi|157372025|ref|YP_001480014.1| 30S ribosomal protein S2 [Serratia proteamaculans 568]
gi|167011238|sp|A8GIE6.1|RS2_SERP5 RecName: Full=30S ribosomal protein S2
gi|157323789|gb|ABV42886.1| ribosomal protein S2 [Serratia proteamaculans 568]
Length = 241
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 164/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEYATGCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ ++I LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAIKLYLTAV------AAAVREGRSQDLA--VQAEESFVEA 240
>gi|261419449|ref|YP_003253131.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC61]
gi|261375906|gb|ACX78649.1| ribosomal protein S2 [Geobacillus sp. Y412MC61]
Length = 235
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVEKVEEAYNFVRELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RL+E++
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G L KKE + +++ +L + +GGIK+M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|315127165|ref|YP_004069168.1| 30S ribosomal protein S2 [Pseudoalteromonas sp. SM9913]
gi|315015679|gb|ADT69017.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913]
Length = 242
Score = 237 bits (604), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 158/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLE+T+ M+ A++++ +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGAAANKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+++ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDAIF+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMLTREMDKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPVVAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y++PGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGR 225
>gi|269966251|ref|ZP_06180340.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B]
gi|269829166|gb|EEZ83411.1| 30S ribosomal protein S2 [Vibrio alginolyticus 40B]
Length = 253
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 119/257 (46%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 163 RPSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+
Sbjct: 3 RPNPIEDFKMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 DALAELAKVGEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLKE++ +G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID +
Sbjct: 123 KRLKELETQSQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
A+ EA L IP+ VVDTN +PDG++YVIPGNDD+ +++ LY A V E R
Sbjct: 183 AIKEANNLGIPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAA------ASAVSEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + E K +EA
Sbjct: 237 NKDVAAVAE-KDGFVEA 252
>gi|288549319|ref|ZP_05966691.2| hypothetical protein ENTCAN_05028 [Enterobacter cancerogenus ATCC
35316]
gi|288318656|gb|EFC57594.1| ribosomal protein S2 [Enterobacter cancerogenus ATCC 35316]
Length = 241
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
VGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 MVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ ++I+LY + A TV E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAISLYLGAV------AATVREGRSQDLA--TQAEESFVEA 240
>gi|225848030|ref|YP_002728193.1| uridylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644040|gb|ACN99090.1| UMP kinase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 236
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ + + EI ++ G+++AIVIGGGNI RGI +DR+TAD
Sbjct: 14 GEALMGDQDYGIDPHFVSELCDEIKDVYDIGVQIAIVIGGGNIFRGIKGTEMGLDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D L K + + VMSAI + + E YI AI++LE+G++VIFA G
Sbjct: 74 YMGMLATVMNALALQDALEKKDVPTRVMSAIEMRQIAEPYIRRRAIRHLEKGRIVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
G+PFFTTDTT ALRAAEIKA+++LKATKVDGIY+ DP K A + K+I++ +VI+K L
Sbjct: 134 TGSPFFTTDTTGALRAAEIKADLLLKATKVDGIYDKDPMKYPDAKLLKEISYLDVINKNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD TA + C + KLPI VF+I K G L++++ G++ G++V
Sbjct: 194 KVMDHTALTLCMENKLPIAVFNIKKKGNLRKIVFGEDVGSIV 235
>gi|115378600|ref|ZP_01465753.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|310823277|ref|YP_003955635.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|115364387|gb|EAU63469.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|309396349|gb|ADO73808.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
Length = 333
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 151/218 (69%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ M A R++ + G+
Sbjct: 41 KQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITSRGGS 100
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ VI EA RAG F+ RWLGG LTNFKTIK I RLK ++ +G+
Sbjct: 101 VLFVGTKKQAQDVIREEAARAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMSEDGTF 160
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+L KKE R++ KL + +GG+K M +P +F+ID A+ EA +L IP+IGV
Sbjct: 161 ERLPKKEVASLEREREKLEKNLGGVKEMAKLPRCVFVIDPKKEHIAIHEATRLGIPVIGV 220
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
VDTN PDGI++VIPGNDD+ +SI L+T I DA L+
Sbjct: 221 VDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIADACLEG 258
>gi|120599552|ref|YP_964126.1| 30S ribosomal protein S2 [Shewanella sp. W3-18-1]
gi|146292451|ref|YP_001182875.1| 30S ribosomal protein S2 [Shewanella putrefaciens CN-32]
gi|386313128|ref|YP_006009293.1| 30S ribosomal protein S2 [Shewanella putrefaciens 200]
gi|166226754|sp|A4Y543.1|RS2_SHEPC RecName: Full=30S ribosomal protein S2
gi|166226756|sp|A1RLM7.1|RS2_SHESW RecName: Full=30S ribosomal protein S2
gi|120559645|gb|ABM25572.1| SSU ribosomal protein S2P [Shewanella sp. W3-18-1]
gi|145564141|gb|ABP75076.1| SSU ribosomal protein S2P [Shewanella putrefaciens CN-32]
gi|319425753|gb|ADV53827.1| ribosomal protein S2 [Shewanella putrefaciens 200]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAA 220
>gi|24373197|ref|NP_717240.1| 30S ribosomal protein S2 RpsB [Shewanella oneidensis MR-1]
gi|113970976|ref|YP_734769.1| 30S ribosomal protein S2 [Shewanella sp. MR-4]
gi|114048200|ref|YP_738750.1| 30S ribosomal protein S2 [Shewanella sp. MR-7]
gi|117921256|ref|YP_870448.1| 30S ribosomal protein S2 [Shewanella sp. ANA-3]
gi|38258373|sp|Q8EGH5.1|RS2_SHEON RecName: Full=30S ribosomal protein S2
gi|122944527|sp|Q0HT62.1|RS2_SHESR RecName: Full=30S ribosomal protein S2
gi|123130243|sp|Q0HGV5.1|RS2_SHESM RecName: Full=30S ribosomal protein S2
gi|166226755|sp|A0KZ23.1|RS2_SHESA RecName: Full=30S ribosomal protein S2
gi|24347418|gb|AAN54684.1| 30S ribosomal protein S2 RpsB [Shewanella oneidensis MR-1]
gi|113885660|gb|ABI39712.1| SSU ribosomal protein S2P [Shewanella sp. MR-4]
gi|113889642|gb|ABI43693.1| SSU ribosomal protein S2P [Shewanella sp. MR-7]
gi|117613588|gb|ABK49042.1| SSU ribosomal protein S2P [Shewanella sp. ANA-3]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAA 220
>gi|194334609|ref|YP_002016469.1| 30S ribosomal protein S2 [Prosthecochloris aestuarii DSM 271]
gi|194312427|gb|ACF46822.1| ribosomal protein S2 [Prosthecochloris aestuarii DSM 271]
Length = 253
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 154/219 (70%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
E +++AGVHFGH R W PKM +IF +N +HII+L+KTLYM E A++ I + +
Sbjct: 12 EDMLRAGVHFGHLARRWCPKMKPFIFMEKNGVHIIDLKKTLYMAEDAMKAIDAIALTGKE 71
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
++FVGTK+QA+ +I+ EA RAGMPF+ +RWLGG+LTNF TI+ SI+R+ +D T+G+
Sbjct: 72 IMFVGTKKQAKNIISAEAERAGMPFVSERWLGGMLTNFSTIRQSIRRMNAIDRMETDGTF 131
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L+ R++ KL R++GGI NM +P A+FI+D+ A+ EA L IPI +
Sbjct: 132 DMITKKERLMLMREKDKLFRILGGISNMTRLPAALFIVDIKKEHIAIKEARSLGIPIFAL 191
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN PD ++YVIP NDD+ +SI L K + D+ L+A+
Sbjct: 192 VDTNCDPDEVDYVIPANDDAIRSIELMVKAVADSILNAR 230
>gi|258545338|ref|ZP_05705572.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826]
gi|258519441|gb|EEV88300.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826]
Length = 259
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 155/218 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++ +AG HFGH+TRFWNPKM+ YI+G R IHIINLEKT+ M A+ ++ + + G++
Sbjct: 8 ELFEAGAHFGHRTRFWNPKMAPYIYGKRGDIHIINLEKTVPMLNDALNFVGTVVANGGSV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKR A + A R GMP+++ RWLGG++TNFKTI+ SI RL+ ++ +G+ +
Sbjct: 68 MFVGTKRSASEAVGEAAARCGMPYVNFRWLGGMMTNFKTIRQSINRLEAIERMAEDGTFQ 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKE ++ R++ KL R + GI+NM +PD +F+IDVG+ A+ EA KL IP++GVV
Sbjct: 128 KLVKKEVIVLGRERDKLARSLTGIRNMRRLPDVLFVIDVGHEHIAIQEAKKLGIPVVGVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN +G++Y+IPGNDDS ++I LY + A +AK
Sbjct: 188 DTNSQLEGVDYIIPGNDDSVRAIRLYVDAVASAIEEAK 225
>gi|149190033|ref|ZP_01868310.1| 30S ribosomal protein S2 [Vibrio shilonii AK1]
gi|148836063|gb|EDL53023.1| 30S ribosomal protein S2 [Vibrio shilonii AK1]
Length = 243
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 115/239 (48%), Positives = 165/239 (69%), Gaps = 7/239 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALAELAKIGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ A +++ RWLGG+LTN+KT++ SI+RLK+ + +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAINADQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEAQAQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + AV EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAVKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIE 414
TN +PDG++YVIPGNDD+ +++ LY DA V E R+K +A + + K +E
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAAADA------VKEGRNKDVAAVAD-KDGFVE 240
>gi|297530576|ref|YP_003671851.1| 30S ribosomal protein S2 [Geobacillus sp. C56-T3]
gi|319766264|ref|YP_004131765.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC52]
gi|375008221|ref|YP_004981854.1| 30S ribosomal protein S2 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448237405|ref|YP_007401463.1| 30S ribosomal protein S2 [Geobacillus sp. GHH01]
gi|297253828|gb|ADI27274.1| ribosomal protein S2 [Geobacillus sp. C56-T3]
gi|317111130|gb|ADU93622.1| ribosomal protein S2 [Geobacillus sp. Y412MC52]
gi|359287070|gb|AEV18754.1| 30S ribosomal protein S2 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445206247|gb|AGE21712.1| 30S ribosomal protein S2 [Geobacillus sp. GHH01]
Length = 235
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RL+E++
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G L KKE + +++ +L + +GGIK+M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|91792911|ref|YP_562562.1| 30S ribosomal protein S2 [Shewanella denitrificans OS217]
gi|123166215|sp|Q12NY7.1|RS2_SHEDO RecName: Full=30S ribosomal protein S2
gi|91714913|gb|ABE54839.1| SSU ribosomal protein S2P [Shewanella denitrificans OS217]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKESALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAA 220
>gi|327475255|gb|AEA77222.1| SSU ribosomal protein S2p [Bacillus sp. 15.4]
Length = 236
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 164/235 (69%), Gaps = 1/235 (0%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA RAGM FI+QRWLGG LTNF+TI+ I RLK+++
Sbjct: 62 GNGGKVLFVGTKKQAQESVKEEAERAGMYFINQRWLGGTLTNFETIQKRISRLKQIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + ++ +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVQLKKEHERLVKFLGGIKDMQELPDALFIIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
PI+G+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK GE + T A
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAKQ-GEEAAVTAA 235
>gi|126173688|ref|YP_001049837.1| 30S ribosomal protein S2 [Shewanella baltica OS155]
gi|152999977|ref|YP_001365658.1| 30S ribosomal protein S2 [Shewanella baltica OS185]
gi|160874598|ref|YP_001553914.1| 30S ribosomal protein S2 [Shewanella baltica OS195]
gi|217974060|ref|YP_002358811.1| 30S ribosomal protein S2 [Shewanella baltica OS223]
gi|373948848|ref|ZP_09608809.1| ribosomal protein S2 [Shewanella baltica OS183]
gi|378707850|ref|YP_005272744.1| 30S ribosomal protein S2 [Shewanella baltica OS678]
gi|386325311|ref|YP_006021428.1| 30S ribosomal protein S2 [Shewanella baltica BA175]
gi|386340446|ref|YP_006036812.1| 30S ribosomal protein S2 [Shewanella baltica OS117]
gi|418023472|ref|ZP_12662457.1| ribosomal protein S2 [Shewanella baltica OS625]
gi|166226751|sp|A3D2K5.1|RS2_SHEB5 RecName: Full=30S ribosomal protein S2
gi|166226752|sp|A6WLA6.1|RS2_SHEB8 RecName: Full=30S ribosomal protein S2
gi|189044997|sp|A9KUK5.1|RS2_SHEB9 RecName: Full=30S ribosomal protein S2
gi|254764489|sp|B8E7R6.1|RS2_SHEB2 RecName: Full=30S ribosomal protein S2
gi|125996893|gb|ABN60968.1| SSU ribosomal protein S2P [Shewanella baltica OS155]
gi|151364595|gb|ABS07595.1| ribosomal protein S2 [Shewanella baltica OS185]
gi|160860120|gb|ABX48654.1| ribosomal protein S2 [Shewanella baltica OS195]
gi|217499195|gb|ACK47388.1| ribosomal protein S2 [Shewanella baltica OS223]
gi|315266839|gb|ADT93692.1| ribosomal protein S2 [Shewanella baltica OS678]
gi|333819456|gb|AEG12122.1| ribosomal protein S2 [Shewanella baltica BA175]
gi|334862847|gb|AEH13318.1| ribosomal protein S2 [Shewanella baltica OS117]
gi|353537355|gb|EHC06912.1| ribosomal protein S2 [Shewanella baltica OS625]
gi|373885448|gb|EHQ14340.1| ribosomal protein S2 [Shewanella baltica OS183]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKESALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAA 220
>gi|318041137|ref|ZP_07973093.1| uridylate kinase [Synechococcus sp. CB0101]
Length = 237
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 110/222 (49%), Positives = 162/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I+ I +++ +++ G +LAIV+GGGNI RG+ +DR+TAD
Sbjct: 12 GEALMGEQGYGIDPAIVNAIAKDVAAVMADGTQLAIVVGGGNIFRGLKGSAAGMDRATAD 71
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N++ L D L ++GI + V SAIS+++ E YI AI+++E+G+VVIFA G
Sbjct: 72 YVGMLATVMNAITLQDGLERAGIPTRVQSAISMQEVAEPYIRRRAIRHMEKGRVVIFAAG 131
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDTTAALRAAEI A+++ KATKVDG+Y+ DPNK A+ Y+ ++F +V+S +L
Sbjct: 132 TGNPFFTTDTTAALRAAEIGADVVFKATKVDGVYDKDPNKHADAVRYESLSFLDVLSGEL 191
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
E+MDSTA + C+D +PI VF + +G + R + G+ GT +
Sbjct: 192 EVMDSTAIALCKDNAIPIVVFDLFGAGNIGRAVRGEPIGTSI 233
>gi|260767825|ref|ZP_05876760.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972]
gi|375130171|ref|YP_004992271.1| 30S ribosomal protein S2 [Vibrio furnissii NCTC 11218]
gi|260617334|gb|EEX42518.1| SSU ribosomal protein S2p (SAe) [Vibrio furnissii CIP 102972]
gi|315179345|gb|ADT86259.1| 30S ribosomal protein S2 [Vibrio furnissii NCTC 11218]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 113/240 (47%), Positives = 171/240 (71%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG+++VIPGNDD+ +++ LY + A++V E R+K +A + + K +EA
Sbjct: 189 TNSNPDGVDFVIPGNDDAIRAVQLYLNAV------AESVNEGRNKDVAAVAD-KDGFVEA 241
>gi|429120941|ref|ZP_19181596.1| SSU ribosomal protein S2p (SAe) [Cronobacter sakazakii 680]
gi|426324571|emb|CCK12333.1| SSU ribosomal protein S2p (SAe) [Cronobacter sakazakii 680]
Length = 276
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 116/256 (45%), Positives = 172/256 (67%), Gaps = 12/256 (4%)
Query: 164 PSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEK 219
P++ E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +
Sbjct: 28 PNFTEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNE 87
Query: 220 AIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQ 279
A+ + ++ KG +LFVGTKR A + A F++ RWLGG+LTN+KT++ SI+
Sbjct: 88 ALAELSKISSRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIK 147
Query: 280 RLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGA 339
RLK+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A
Sbjct: 148 RLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIA 207
Query: 340 VSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
+ EA L IP+ +VDTN PDG+++VIPGNDD+ ++++LY + A TV E RS
Sbjct: 208 IKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAV------AATVREGRS 261
Query: 400 KTLAPIMECKKALIEA 415
+ LA + +++ +EA
Sbjct: 262 QDLAA--QAEESFVEA 275
>gi|54778755|gb|AAV39589.1| ribosomal protein S [synthetic construct]
Length = 268
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 114/252 (45%), Positives = 171/252 (67%), Gaps = 8/252 (3%)
Query: 166 YMESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIY 225
+M + +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ +
Sbjct: 23 HMTATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELN 82
Query: 226 QLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD 285
++ KG +LFVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++
Sbjct: 83 KIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 142
Query: 286 LFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIK 345
+G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA
Sbjct: 143 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANN 202
Query: 346 LNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
L IP+ +VDTN PDG+++VIPGNDD+ +++ LY + A TV E RS+ LA
Sbjct: 203 LGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQDLAS- 255
Query: 406 MECKKALIEANG 417
+ +++ +EA G
Sbjct: 256 -QAEESFVEAEG 266
>gi|329118522|ref|ZP_08247226.1| stringent starvation protein A [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465257|gb|EGF11538.1| stringent starvation protein A [Neisseria bacilliformis ATCC
BAA-1200]
Length = 201
Score = 237 bits (604), Expect = 3e-59, Method: Composition-based stats.
Identities = 105/178 (58%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLAIMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ R R RL+L E+E+F H+ +LE +++ K +ARE + L LAP+F + KY+
Sbjct: 85 VQRGRGRLVLYRLERELFSHVQILEAP--ESTSKEQSKAREAVAQGLTMLAPMFSRTKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+GD+FSM+DV +APLLWRLD+YGI L ++A+PL+KYAERIF R +++++LTPAEK M+
Sbjct: 143 MGDDFSMIDVALAPLLWRLDHYGIKLGRTAAPLLKYAERIFQREAFIDALTPAEKAMR 200
>gi|118496840|ref|YP_897890.1| 30S ribosomal protein S2 [Francisella novicida U112]
gi|194324476|ref|ZP_03058248.1| ribosomal protein S2 [Francisella novicida FTE]
gi|166225272|sp|A0Q4H1.1|RS2_FRATN RecName: Full=30S ribosomal protein S2
gi|118422746|gb|ABK89136.1| 30S ribosomal protein S2 [Francisella novicida U112]
gi|194321311|gb|EDX18797.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE]
Length = 239
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 ILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVAI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|220931609|ref|YP_002508517.1| 30S ribosomal protein S2 [Halothermothrix orenii H 168]
gi|254764480|sp|B8CW53.1|RS2_HALOH RecName: Full=30S ribosomal protein S2
gi|219992919|gb|ACL69522.1| ribosomal protein S2 [Halothermothrix orenii H 168]
Length = 262
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 158/230 (68%), Gaps = 1/230 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
+++++GVHFGHQTR WNPKM YIF RN I+II+L+KT+ + +KA Y+ + T+
Sbjct: 8 QLLESGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVALLDKAYDYVRDMASKGKTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ I EA R GMP+++QRWLGG+LTNF+TIK ++RL E++ +G
Sbjct: 68 LFVGTKKQAQETIKTEAERCGMPYVNQRWLGGMLTNFRTIKKRVKRLNELEKMEEDGLFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L +++ KL R +GGI++M +PD ++I D AV+EA KLNIPI+ +V
Sbjct: 128 VLPKKEVILLKKERDKLERFLGGIRDMKNLPDVVYITDPRKESIAVAEARKLNIPIVSIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAP 404
DTN PD I+Y+IPGNDD+ +++ L + I DA L K GE ++ P
Sbjct: 188 DTNCDPDLIDYIIPGNDDAIRAVKLISSKIADAVLAGKQ-GEQLTEEAKP 236
>gi|387885941|ref|YP_006316240.1| 30S ribosomal protein S2 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870757|gb|AFJ42764.1| 30S ribosomal protein S2 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 239
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 157/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ ++++A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVSLFQEAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ +I EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 VLFVGTKRQAQDIIEAEAKRCGMPFVSYRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 DSLTKKEMLQNIRTIEKLEKVLGGIKKMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVSI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|304404281|ref|ZP_07385943.1| uridylate kinase [Paenibacillus curdlanolyticus YK9]
gi|304347259|gb|EFM13091.1| uridylate kinase [Paenibacillus curdlanolyticus YK9]
Length = 242
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 166/223 (74%), Gaps = 1/223 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEAL Y I +S+I +I ++ E++ +E+AIV+GGGNI RGI+ + IDR+TAD
Sbjct: 15 GEALAGQGGYGIEASVIASIAEQVKEVIELNVEVAIVVGGGNIWRGIAGTAKGIDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLAL D L + G+ + V ++I++++ E YI AI++LE+G+VVIFA G
Sbjct: 75 YMGMLATVMNSLALQDALEQIGVPTRVQTSIAMQQIAEPYIRRRAIRHLEKGRVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKA-TKVDGIYNSDPNKCLSAIIYKKITFDEVISKK 778
GNPFF+TDTTAALRAAEI+AE+IL A KV+G+Y++DP K +A Y ++T+ EV++K
Sbjct: 135 TGNPFFSTDTTAALRAAEIEAEVILMAKNKVNGVYSADPFKDPTAEKYDQLTYMEVLNKN 194
Query: 779 LEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
L +MD+TA S C D +P+ VFSI +SG +KRVI G+ GT+V
Sbjct: 195 LGVMDATASSLCMDNNIPLIVFSITESGNIKRVILGERIGTIV 237
>gi|270264820|ref|ZP_06193084.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13]
gi|333928809|ref|YP_004502388.1| 30S ribosomal protein S2 [Serratia sp. AS12]
gi|333933762|ref|YP_004507340.1| 30S ribosomal protein S2 [Serratia plymuthica AS9]
gi|386330632|ref|YP_006026802.1| 30S ribosomal protein S2 [Serratia sp. AS13]
gi|386823783|ref|ZP_10110925.1| 30S ribosomal protein S2 [Serratia plymuthica PRI-2C]
gi|421785181|ref|ZP_16221613.1| ribosomal protein S2 [Serratia plymuthica A30]
gi|270041118|gb|EFA14218.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13]
gi|333475369|gb|AEF47079.1| ribosomal protein S2 [Serratia plymuthica AS9]
gi|333492869|gb|AEF52031.1| ribosomal protein S2 [Serratia sp. AS12]
gi|333962965|gb|AEG29738.1| ribosomal protein S2 [Serratia sp. AS13]
gi|386379323|gb|EIJ20118.1| 30S ribosomal protein S2 [Serratia plymuthica PRI-2C]
gi|407752596|gb|EKF62747.1| ribosomal protein S2 [Serratia plymuthica A30]
Length = 241
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 164/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEYANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ ++I LY + A V E RS+ LA ++ +++ +EA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAIKLYLTAV------AAAVREGRSQDLA--VQAEESFVEA 240
>gi|422413146|ref|ZP_16490105.1| ribosomal protein S2 [Listeria innocua FSL S4-378]
gi|313618586|gb|EFR90558.1| ribosomal protein S2 [Listeria innocua FSL S4-378]
Length = 249
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 161/231 (69%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + +EA+R+G F++ RWLGG LTNF+TI+ IQ +++ +G+
Sbjct: 68 LFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQXXXKIEKMEADGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK+M +PDA+FI+D + AV+EA KL+IPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPI 405
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL +AP+
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPV 238
>gi|297568945|ref|YP_003690289.1| 30S ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2]
gi|296924860|gb|ADH85670.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2]
Length = 255
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 150/219 (68%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AG+HFGHQTR WNPKM YIFG RN I+IINL+KTL ++ KA + G
Sbjct: 7 KEMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFNKACDAARDIAAKGGN 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ +I EA R GM ++D RWLGG+LTN +TIK S+ RLK +GSI
Sbjct: 67 ILFVGTKRQAQEIIREEATRCGMFYVDHRWLGGMLTNHQTIKKSVDRLKAYTSMQEDGSI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+ KKE L+ ++ +KL R +GGIK M +P AIF++D AV+EA +L IP+ +
Sbjct: 127 NRYKKKEILMIQKETIKLERNLGGIKEMKTLPAAIFVVDPKRESIAVTEANRLGIPVFAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN P+GIN++IPGNDD+ KSI L + + DA LD K
Sbjct: 187 ADTNCDPEGINHLIPGNDDAIKSIRLVSAKLADAILDGK 225
>gi|330445145|ref|ZP_08308797.1| ribosomal protein S2 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489336|dbj|GAA03294.1| ribosomal protein S2 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 242
Score = 236 bits (603), Expect = 4e-59, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 161/228 (70%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ I ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNEALAEIEKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I AV +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+ K
Sbjct: 69 FVGTKRAASESIKEAAVSCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F++ A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVVGADCEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG+++VIPGNDD+ ++I LYT + A+TV E R++ +A
Sbjct: 189 TNADPDGVDFVIPGNDDAIRAIQLYTGAV------AQTVKEARNQDIA 230
>gi|294669746|ref|ZP_06734812.1| hypothetical protein NEIELOOT_01646 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308312|gb|EFE49555.1| hypothetical protein NEIELOOT_01646 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 201
Score = 236 bits (603), Expect = 4e-59, Method: Composition-based stats.
Identities = 108/178 (60%), Positives = 141/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ R R RL+L E+E+F H+ +LE + + K +ARE I L LAP F K+KY+
Sbjct: 85 VQRGRGRLVLYRLERELFSHVQVLEAPESTS--KEQAKAREAISQGLTMLAPAFSKHKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
+GD+FSM+DV IAPLLWRLD+Y I L K+A+PL+KYAER+F R +++E+LTPAEK M+
Sbjct: 143 MGDDFSMIDVAIAPLLWRLDHYDIKLGKTAAPLLKYAERLFQREAFIEALTPAEKAMR 200
>gi|94967594|ref|YP_589642.1| 30S ribosomal protein S2 [Candidatus Koribacter versatilis
Ellin345]
gi|122986448|sp|Q1IU82.1|RS2_ACIBL RecName: Full=30S ribosomal protein S2
gi|94549644|gb|ABF39568.1| SSU ribosomal protein S2P [Candidatus Koribacter versatilis
Ellin345]
Length = 301
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 154/222 (69%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KTL M+++A +++ + +
Sbjct: 8 ELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVSDVAAEGKLV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQA+ IA EA R GM +I+QRWLGGLLTN+ T++ S++RLKE+D T+G
Sbjct: 68 LFVGTKRQAQDAIAEEAKRCGMFYINQRWLGGLLTNWVTVQKSVKRLKELDEMATDGRYE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE + R++ L + GIKN+N +PD +F+ID + AV EA KL IP++ VV
Sbjct: 128 LLPKKEVIKLERERKHLQANLAGIKNLNRLPDCLFVIDSNKEQIAVKEARKLGIPVVAVV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
DTN P ++YVIPGNDD+ ++I L+ I D+ + + +
Sbjct: 188 DTNCDPSEVDYVIPGNDDALRAIRLFASKIADSVAEGSQLAD 229
>gi|271499495|ref|YP_003332520.1| 30S ribosomal protein S2 [Dickeya dadantii Ech586]
gi|270343050|gb|ACZ75815.1| ribosomal protein S2 [Dickeya dadantii Ech586]
Length = 241
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 164/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQ R+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQKRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEALL R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++Y+IPGNDD+ ++++LY + A V E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDYIIPGNDDAIRAVSLYLNAV------AAAVREGRSQDLAA--QAEESFVEA 240
>gi|134302597|ref|YP_001122568.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|208780543|ref|ZP_03247882.1| ribosomal protein S2 [Francisella novicida FTG]
gi|254372204|ref|ZP_04987696.1| ribosomal protein S2 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254373687|ref|ZP_04989171.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548]
gi|385792163|ref|YP_005825139.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|421752482|ref|ZP_16189507.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754348|ref|ZP_16191323.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
831]
gi|421758079|ref|ZP_16194939.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700103]
gi|421759910|ref|ZP_16196734.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70102010]
gi|424675232|ref|ZP_18112141.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70001275]
gi|166225273|sp|A4IZU6.1|RS2_FRATW RecName: Full=30S ribosomal protein S2
gi|134050374|gb|ABO47445.1| ribosomal protein S2 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569934|gb|EDN35588.1| ribosomal protein S2 [Francisella novicida GA99-3549]
gi|151571409|gb|EDN37063.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548]
gi|208743518|gb|EDZ89823.1| ribosomal protein S2 [Francisella novicida FTG]
gi|328676309|gb|AEB27179.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida Fx1]
gi|409084872|gb|EKM85033.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
831]
gi|409085066|gb|EKM85219.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089827|gb|EKM89859.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70102010]
gi|409090649|gb|EKM90662.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700103]
gi|417434181|gb|EKT89149.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70001275]
Length = 239
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 ILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVAI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|448243662|ref|YP_007407715.1| 30S ribosomal subunit protein S2 [Serratia marcescens WW4]
gi|445214026|gb|AGE19696.1| 30S ribosomal subunit protein S2 [Serratia marcescens WW4]
gi|453065473|gb|EMF06435.1| 30S ribosomal protein S2 [Serratia marcescens VGH107]
Length = 241
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 167/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLE+T+ M+ A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALAELTKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G++ K
Sbjct: 69 FVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTLDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ ++ +EA
Sbjct: 189 TNSNPDGVDFIIPGNDDAIRAVNLYLTAV------AAAVREGRSQDLA--VQAEEGFVEA 240
>gi|188996516|ref|YP_001930767.1| uridylate kinase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931583|gb|ACD66213.1| uridylate kinase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 236
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ + + EI ++ G+++AIVIGGGNI RGI +DR+TAD
Sbjct: 14 GEALMGDQEYGIDPHFVSELCDEIKDVYEIGVQIAIVIGGGNIFRGIQGTEIGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D+L K + + VMSAI + + E YI AI++LE+G++VIFA G
Sbjct: 74 YMGMLATVMNALALQDVLEKKDVPTRVMSAIEMRQIAEPYIRRRAIRHLEKGRIVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
G+PFFTTDTT ALRAAEIKA+I+LKATKVDG+Y+ DP K A + K+I++ + I+K L
Sbjct: 134 TGSPFFTTDTTGALRAAEIKADILLKATKVDGVYDKDPEKYPDAKLLKEISYLDAINKDL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD TA + C + KLPI VF+I K G L++++ G++ G++V
Sbjct: 194 KVMDHTAITLCMENKLPIGVFNIKKKGNLRKIVFGEDVGSIV 235
>gi|167626818|ref|YP_001677318.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596819|gb|ABZ86817.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 257
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 155/219 (70%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 23 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 82
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ +I EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G+
Sbjct: 83 VLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGTF 142
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 143 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVSI 202
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 203 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 241
>gi|429082371|ref|ZP_19145445.1| SSU ribosomal protein S2p (SAe) [Cronobacter condimenti 1330]
gi|426548924|emb|CCJ71486.1| SSU ribosomal protein S2p (SAe) [Cronobacter condimenti 1330]
Length = 276
Score = 236 bits (603), Expect = 4e-59, Method: Composition-based stats.
Identities = 116/256 (45%), Positives = 172/256 (67%), Gaps = 12/256 (4%)
Query: 164 PSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEK 219
P++ E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +
Sbjct: 28 PNFTEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNE 87
Query: 220 AIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQ 279
A+ + ++ KG +LFVGTKR A + A F++ RWLGG+LTN+KT++ SI+
Sbjct: 88 ALAELSKISSRKGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIK 147
Query: 280 RLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGA 339
RLK+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A
Sbjct: 148 RLKDLETQSQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIA 207
Query: 340 VSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRS 399
+ EA L IP+ +VDTN PDG+++VIPGNDD+ ++++LY + A TV E RS
Sbjct: 208 IKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAV------AATVREGRS 261
Query: 400 KTLAPIMECKKALIEA 415
+ LA + +++ +EA
Sbjct: 262 QDLAS--QAEESFVEA 275
>gi|114562448|ref|YP_749961.1| 30S ribosomal protein S2 [Shewanella frigidimarina NCIMB 400]
gi|122300317|sp|Q085E2.1|RS2_SHEFN RecName: Full=30S ribosomal protein S2
gi|114333741|gb|ABI71123.1| SSU ribosomal protein S2P [Shewanella frigidimarina NCIMB 400]
Length = 242
Score = 236 bits (603), Expect = 4e-59, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAA 220
>gi|148238975|ref|YP_001224362.1| uridylate kinase [Synechococcus sp. WH 7803]
gi|172047784|sp|A5GJF0.1|PYRH_SYNPW RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|147847514|emb|CAK23065.1| Uridylate kinase [Synechococcus sp. WH 7803]
Length = 235
Score = 236 bits (603), Expect = 4e-59, Method: Composition-based stats.
Identities = 110/233 (47%), Positives = 167/233 (71%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
Y+ A+LK GEALM Y I+ +I++ I +++ +V+ G +LAIV+GGGNI RG+
Sbjct: 3 YARALLKLS--GEALMGDQGYGIDPAIVQAIAKDVAGVVASGTQLAIVVGGGNIFRGLKG 60
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+DR+TADY+GMLAT++N++ L D L ++GI + V +AI +++ E YI AI++L
Sbjct: 61 SAAGMDRATADYVGMLATVMNAITLQDGLERAGIPTRVQTAIEMQEVAEPYIRRRAIRHL 120
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VV+F G GNPFFTTDTTAALRAAEI A+++ KATKVDG+Y+ DP+K A+ Y
Sbjct: 121 EKGRVVVFGAGCGNPFFTTDTTAALRAAEISADVVFKATKVDGVYDKDPHKYADAVRYDT 180
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TF +V+S +L +MDSTA + C+D +PI VF++ ++G + R + G+ G+ +
Sbjct: 181 LTFQQVLSGELAVMDSTAIALCKDNNIPIVVFNLFEAGNIGRAVAGEPIGSRI 233
>gi|165939849|ref|ZP_02228389.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275]
gi|167399959|ref|ZP_02305477.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|270487340|ref|ZP_06204414.1| ribosomal protein S2 [Yersinia pestis KIM D27]
gi|21960060|gb|AAM86687.1|AE013914_7 30S ribosomal subunit protein S2 [Yersinia pestis KIM10+]
gi|45437440|gb|AAS62991.1| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str.
91001]
gi|165912252|gb|EDR30889.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275]
gi|167050667|gb|EDR62075.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|270335844|gb|EFA46621.1| ribosomal protein S2 [Yersinia pestis KIM D27]
Length = 269
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 166/240 (69%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 37 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 96
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 97 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 156
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 157 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 216
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++++IPGNDD+ +++ LY + A V E RS+ LA ++ +++ +EA
Sbjct: 217 TNSDPDGVDFIIPGNDDAIRAVKLYLGAV------ATAVREGRSQDLA--VQAEESFVEA 268
>gi|402817523|ref|ZP_10867111.1| 30S ribosomal protein S2 [Paenibacillus alvei DSM 29]
gi|402505045|gb|EJW15572.1| 30S ribosomal protein S2 [Paenibacillus alvei DSM 29]
Length = 232
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 156/217 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +G GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVGEENGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R GM +I+QRWLGG LTNF+TI+ I RLK+++ +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRIDRLKQLETMEEDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE ++ +++ +L + +GGIKNM +P A+F+ID + AV+EA KL IPI+G+V
Sbjct: 128 VLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEA 224
>gi|209573718|sp|B0U101.2|RS2_FRAP2 RecName: Full=30S ribosomal protein S2
Length = 239
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 155/219 (70%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ +I EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G+
Sbjct: 65 VLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGTF 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVSI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|410614328|ref|ZP_11325376.1| small subunit ribosomal protein S2 [Glaciecola psychrophila 170]
gi|410166163|dbj|GAC39265.1| small subunit ribosomal protein S2 [Glaciecola psychrophila 170]
Length = 243
Score = 236 bits (602), Expect = 4e-59, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ ++ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNEALNFVGGIASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A + ++++RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASDAVKDAADKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 LTKKEVLMLTREMTKLETSLGGIKNMGGLPDVLFVVDADHEHIAITEAGNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y++PGNDD+ +++ LY DA ++ +
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAVQLYLNAAADAVINGR 225
>gi|269138093|ref|YP_003294793.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202]
gi|387866824|ref|YP_005698293.1| 30S ribosomal protein S2 [Edwardsiella tarda FL6-60]
gi|267983753|gb|ACY83582.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202]
gi|304558137|gb|ADM40801.1| SSU ribosomal protein S2p (SAe) [Edwardsiella tarda FL6-60]
Length = 236
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++ KG +L
Sbjct: 4 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A+ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 64 FVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFSIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG+++VIPGNDD+ +++ LY + +A V E RS+ L + + ++ + EA
Sbjct: 184 TNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEA------VREGRSQDL--VAQAEETMAEA 235
>gi|15677783|ref|NP_274947.1| stringent starvation protein A [Neisseria meningitidis MC58]
gi|121635608|ref|YP_975853.1| regulator of pilE expression [Neisseria meningitidis FAM18]
gi|161869257|ref|YP_001598424.1| stringent starvation protein A [Neisseria meningitidis 053442]
gi|254804232|ref|YP_003082453.1| stringent starvation protein A [Neisseria meningitidis alpha14]
gi|304388508|ref|ZP_07370611.1| stringent starvation protein A [Neisseria meningitidis ATCC 13091]
gi|385324895|ref|YP_005879334.1| putative SspA-like protein [Neisseria meningitidis 8013]
gi|385329199|ref|YP_005883502.1| stringent starvation protein A [Neisseria meningitidis alpha710]
gi|385341203|ref|YP_005895074.1| stringent starvation protein A [Neisseria meningitidis M01-240149]
gi|385852036|ref|YP_005898551.1| stringent starvation protein A [Neisseria meningitidis M04-240196]
gi|385853998|ref|YP_005900512.1| stringent starvation protein A [Neisseria meningitidis H44/76]
gi|385855963|ref|YP_005902476.1| stringent starvation protein A [Neisseria meningitidis M01-240355]
gi|385856501|ref|YP_005903013.1| stringent starvation protein A [Neisseria meningitidis NZ-05/33]
gi|416164881|ref|ZP_11607303.1| stringent starvation protein A [Neisseria meningitidis N1568]
gi|416179867|ref|ZP_11611220.1| stringent starvation protein A [Neisseria meningitidis M6190]
gi|416189212|ref|ZP_11615174.1| stringent starvation protein A [Neisseria meningitidis M0579]
gi|416193377|ref|ZP_11617141.1| stringent starvation protein A [Neisseria meningitidis ES14902]
gi|416198882|ref|ZP_11619249.1| stringent starvation protein A [Neisseria meningitidis CU385]
gi|416214781|ref|ZP_11623075.1| stringent starvation protein A [Neisseria meningitidis M01-240013]
gi|418289091|ref|ZP_12901480.1| stringent starvation protein A [Neisseria meningitidis NM233]
gi|418291334|ref|ZP_12903358.1| stringent starvation protein A [Neisseria meningitidis NM220]
gi|421538917|ref|ZP_15985089.1| stringent starvation protein A [Neisseria meningitidis 93003]
gi|421543200|ref|ZP_15989297.1| stringent starvation protein A [Neisseria meningitidis NM255]
gi|421545267|ref|ZP_15991331.1| stringent starvation protein A [Neisseria meningitidis NM140]
gi|421547315|ref|ZP_15993353.1| stringent starvation protein A [Neisseria meningitidis NM183]
gi|421548287|ref|ZP_15994315.1| stringent starvation protein A [Neisseria meningitidis NM2781]
gi|421550924|ref|ZP_15996925.1| stringent starvation protein A [Neisseria meningitidis 69166]
gi|421553522|ref|ZP_15999483.1| stringent starvation protein A [Neisseria meningitidis NM576]
gi|421557941|ref|ZP_16003837.1| stringent starvation protein A [Neisseria meningitidis 80179]
gi|421561975|ref|ZP_16007812.1| glutaredoxin family protein [Neisseria meningitidis NM2657]
gi|421564042|ref|ZP_16009853.1| stringent starvation protein A [Neisseria meningitidis NM2795]
gi|421566286|ref|ZP_16012040.1| stringent starvation protein A [Neisseria meningitidis NM3081]
gi|421568480|ref|ZP_16014203.1| stringent starvation protein A [Neisseria meningitidis NM3001]
gi|421907955|ref|ZP_16337817.1| stringent starvation protein A [Neisseria meningitidis alpha704]
gi|427826606|ref|ZP_18993656.1| stringent starvation protein A [Neisseria meningitidis H44/76]
gi|433465926|ref|ZP_20423396.1| glutaredoxin family protein [Neisseria meningitidis NM422]
gi|433470087|ref|ZP_20427493.1| glutaredoxin family protein [Neisseria meningitidis 98080]
gi|433472224|ref|ZP_20429602.1| glutaredoxin family protein [Neisseria meningitidis 68094]
gi|433474275|ref|ZP_20431629.1| glutaredoxin family protein [Neisseria meningitidis 97021]
gi|433478502|ref|ZP_20435810.1| glutaredoxin family protein [Neisseria meningitidis 70012]
gi|433482701|ref|ZP_20439955.1| glutaredoxin family protein [Neisseria meningitidis 2006087]
gi|433484708|ref|ZP_20441926.1| glutaredoxin family protein [Neisseria meningitidis 2002038]
gi|433486949|ref|ZP_20444138.1| glutaredoxin family protein [Neisseria meningitidis 97014]
gi|433489120|ref|ZP_20446269.1| glutaredoxin family protein [Neisseria meningitidis M13255]
gi|433491299|ref|ZP_20448411.1| glutaredoxin family protein [Neisseria meningitidis NM418]
gi|433493378|ref|ZP_20450462.1| glutaredoxin family protein [Neisseria meningitidis NM586]
gi|433495431|ref|ZP_20452491.1| glutaredoxin family protein [Neisseria meningitidis NM762]
gi|433503764|ref|ZP_20460718.1| glutaredoxin family protein [Neisseria meningitidis NM126]
gi|433505819|ref|ZP_20462749.1| glutaredoxin family protein [Neisseria meningitidis 9506]
gi|433507936|ref|ZP_20464832.1| glutaredoxin family protein [Neisseria meningitidis 9757]
gi|433510072|ref|ZP_20466928.1| glutaredoxin family protein [Neisseria meningitidis 12888]
gi|433512165|ref|ZP_20468978.1| glutaredoxin family protein [Neisseria meningitidis 4119]
gi|433526962|ref|ZP_20483583.1| glutaredoxin family protein [Neisseria meningitidis 69096]
gi|433539710|ref|ZP_20496176.1| glutaredoxin family protein [Neisseria meningitidis 70030]
gi|7227212|gb|AAF42282.1| stringent starvation protein A [Neisseria meningitidis MC58]
gi|120867314|emb|CAM11085.1| putative regulator of pilE expression [Neisseria meningitidis
FAM18]
gi|161594810|gb|ABX72470.1| stringent starvation protein A [Neisseria meningitidis 053442]
gi|254667774|emb|CBA03717.1| stringent starvation protein A [Neisseria meningitidis alpha14]
gi|254674239|emb|CBA10023.1| stringent starvation protein A [Neisseria meningitidis alpha275]
gi|261393282|emb|CAX50908.1| putative SspA-like protein [Neisseria meningitidis 8013]
gi|304337505|gb|EFM03671.1| stringent starvation protein A [Neisseria meningitidis ATCC 13091]
gi|308390051|gb|ADO32371.1| stringent starvation protein A [Neisseria meningitidis alpha710]
gi|316985580|gb|EFV64527.1| stringent starvation protein A [Neisseria meningitidis H44/76]
gi|325127417|gb|EGC50348.1| stringent starvation protein A [Neisseria meningitidis N1568]
gi|325131438|gb|EGC54146.1| stringent starvation protein A [Neisseria meningitidis M6190]
gi|325135545|gb|EGC58163.1| stringent starvation protein A [Neisseria meningitidis M0579]
gi|325137509|gb|EGC60093.1| stringent starvation protein A [Neisseria meningitidis ES14902]
gi|325139604|gb|EGC62144.1| stringent starvation protein A [Neisseria meningitidis CU385]
gi|325143663|gb|EGC65982.1| stringent starvation protein A [Neisseria meningitidis M01-240013]
gi|325201002|gb|ADY96457.1| stringent starvation protein A [Neisseria meningitidis H44/76]
gi|325201409|gb|ADY96863.1| stringent starvation protein A [Neisseria meningitidis M01-240149]
gi|325204904|gb|ADZ00358.1| stringent starvation protein A [Neisseria meningitidis M01-240355]
gi|325206859|gb|ADZ02312.1| stringent starvation protein A [Neisseria meningitidis M04-240196]
gi|325207390|gb|ADZ02842.1| stringent starvation protein A [Neisseria meningitidis NZ-05/33]
gi|372200014|gb|EHP14153.1| stringent starvation protein A [Neisseria meningitidis NM220]
gi|372200332|gb|EHP14422.1| stringent starvation protein A [Neisseria meningitidis NM233]
gi|389606682|emb|CCA45594.1| stringent starvation protein A homolog [Neisseria meningitidis
alpha522]
gi|393290920|emb|CCI73829.1| stringent starvation protein A [Neisseria meningitidis alpha704]
gi|402315406|gb|EJU50970.1| stringent starvation protein A [Neisseria meningitidis NM255]
gi|402315624|gb|EJU51187.1| stringent starvation protein A [Neisseria meningitidis 93003]
gi|402321344|gb|EJU56819.1| stringent starvation protein A [Neisseria meningitidis NM140]
gi|402321678|gb|EJU57151.1| stringent starvation protein A [Neisseria meningitidis NM183]
gi|402327009|gb|EJU62407.1| stringent starvation protein A [Neisseria meningitidis NM2781]
gi|402328010|gb|EJU63392.1| stringent starvation protein A [Neisseria meningitidis NM576]
gi|402329461|gb|EJU64822.1| stringent starvation protein A [Neisseria meningitidis 69166]
gi|402333382|gb|EJU68687.1| stringent starvation protein A [Neisseria meningitidis 80179]
gi|402336360|gb|EJU71621.1| glutaredoxin family protein [Neisseria meningitidis NM2657]
gi|402339261|gb|EJU74478.1| stringent starvation protein A [Neisseria meningitidis NM2795]
gi|402340772|gb|EJU75965.1| stringent starvation protein A [Neisseria meningitidis NM3081]
gi|402341422|gb|EJU76601.1| stringent starvation protein A [Neisseria meningitidis NM3001]
gi|432200623|gb|ELK56713.1| glutaredoxin family protein [Neisseria meningitidis NM422]
gi|432201054|gb|ELK57140.1| glutaredoxin family protein [Neisseria meningitidis 98080]
gi|432206850|gb|ELK62851.1| glutaredoxin family protein [Neisseria meningitidis 68094]
gi|432207593|gb|ELK63582.1| glutaredoxin family protein [Neisseria meningitidis 97021]
gi|432213160|gb|ELK69086.1| glutaredoxin family protein [Neisseria meningitidis 70012]
gi|432214570|gb|ELK70469.1| glutaredoxin family protein [Neisseria meningitidis 2006087]
gi|432219581|gb|ELK75420.1| glutaredoxin family protein [Neisseria meningitidis 2002038]
gi|432220548|gb|ELK76368.1| glutaredoxin family protein [Neisseria meningitidis 97014]
gi|432221116|gb|ELK76931.1| glutaredoxin family protein [Neisseria meningitidis M13255]
gi|432225433|gb|ELK81176.1| glutaredoxin family protein [Neisseria meningitidis NM418]
gi|432226319|gb|ELK82050.1| glutaredoxin family protein [Neisseria meningitidis NM586]
gi|432227811|gb|ELK83516.1| glutaredoxin family protein [Neisseria meningitidis NM762]
gi|432238391|gb|ELK93958.1| glutaredoxin family protein [Neisseria meningitidis NM126]
gi|432238954|gb|ELK94515.1| glutaredoxin family protein [Neisseria meningitidis 9506]
gi|432239146|gb|ELK94705.1| glutaredoxin family protein [Neisseria meningitidis 9757]
gi|432244807|gb|ELL00289.1| glutaredoxin family protein [Neisseria meningitidis 12888]
gi|432245062|gb|ELL00537.1| glutaredoxin family protein [Neisseria meningitidis 4119]
gi|432258513|gb|ELL13796.1| glutaredoxin family protein [Neisseria meningitidis 69096]
gi|432271156|gb|ELL26283.1| glutaredoxin family protein [Neisseria meningitidis 70030]
Length = 201
Score = 236 bits (602), Expect = 4e-59, Method: Composition-based stats.
Identities = 109/178 (61%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D++NKP+++ MNPY QVP+LVERDL+L+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H+ +LEN + K +ARE I + L LAP F K+KY+
Sbjct: 85 VMRGRGRLVLYRMEKELFNHVQVLENP--AATNKEQAKAREAIGNGLTMLAPSFSKSKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSM+DV +APLLWRLD+Y + L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 143 LGEDFSMIDVALAPLLWRLDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 200
>gi|384541739|ref|YP_005725800.1| 30S ribosomal protein S2 [Shigella flexneri 2002017]
gi|281599523|gb|ADA72507.1| 30S ribosomal protein S2 [Shigella flexneri 2002017]
Length = 307
Score = 236 bits (602), Expect = 4e-59, Method: Composition-based stats.
Identities = 116/254 (45%), Positives = 172/254 (67%), Gaps = 12/254 (4%)
Query: 166 YMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAI 221
Y+E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+
Sbjct: 61 YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL 120
Query: 222 RYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRL 281
+ ++ KG +LFVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RL
Sbjct: 121 AELNKIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL 180
Query: 282 KEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVS 341
K+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+
Sbjct: 181 KDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK 240
Query: 342 EAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKT 401
EA L IP+ +VDTN PDG+++VIPGNDD+ +++ LY + A TV E RS+
Sbjct: 241 EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQD 294
Query: 402 LAPIMECKKALIEA 415
LA + +++ +EA
Sbjct: 295 LAS--QAEESFVEA 306
>gi|20807856|ref|NP_623027.1| 30S ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4]
gi|25009202|sp|Q8RA21.1|RS2_THETN RecName: Full=30S ribosomal protein S2
gi|20516420|gb|AAM24631.1| Ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4]
Length = 235
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 156/224 (69%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM+ YIF RN I+II+L++T+ E+A ++ +L
Sbjct: 2 SIVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLV 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
GT+LFVGTK+QA+ I EA R GM +++QRWLGG LTNFKTIKT IQRLKE+
Sbjct: 62 MDGGTILFVGTKKQAQESIKEEAERCGMFYVNQRWLGGTLTNFKTIKTRIQRLKELKRME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE + +++ +L + +GGI+NM +P A+FI+D AVSEA L I
Sbjct: 122 EDGTFEVLPKKEVIRLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVSEARALEI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PI+ +VDTN P+ I+Y IPGNDD+ +++ L T I DA L+ K
Sbjct: 182 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVLEGK 225
>gi|374313959|ref|YP_005060388.1| 30S ribosomal protein S2 [Serratia symbiotica str. 'Cinara cedri']
gi|363988185|gb|AEW44376.1| 30S ribosomal protein S2 [Serratia symbiotica str. 'Cinara cedri']
Length = 241
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 153/218 (70%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLE+T+ M+ A+ + + KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALSQLTKFAARKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A F++ RWLGG+LTN+KT++ SI+RLK+++L +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAHNCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLELQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELAKLENSLGGIKGMGGLPDALFVIDANHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
TN +PDGI+++IPGNDD+ ++++LY + A + ++
Sbjct: 189 TNSAPDGIDFIIPGNDDAIRAVSLYLTAVATAICEGRS 226
>gi|340753407|ref|ZP_08690193.1| uridylate kinase [Fusobacterium sp. 2_1_31]
gi|422315168|ref|ZP_16396607.1| uridylate kinase [Fusobacterium periodonticum D10]
gi|229422999|gb|EEO38046.1| uridylate kinase [Fusobacterium sp. 2_1_31]
gi|404592794|gb|EKA94543.1| uridylate kinase [Fusobacterium periodonticum D10]
Length = 239
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 160/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM + I+S +I + +I EIV G+E++IVIGGGNI RGIS Q +DR T D
Sbjct: 15 GEALMGDQEFGISSDVIASYAKQIKEIVDLGVEVSIVIGGGNIFRGISGAAQGVDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT+INSLAL + + K G+ + V +AI + K E +I A ++LE+G+VVIF G
Sbjct: 75 HMGMLATVINSLALQNSIEKLGVPTRVQTAIEMPKIAEPFIKRRAQRHLEKGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT AALRA E+ ++++KATKVDGIY+ DP K A Y+K+T++EV++K L
Sbjct: 135 TGNPYFTTDTAAALRAIEMGTDVVIKATKVDGIYDKDPVKFADAKKYEKVTYNEVLAKDL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA S CR+ KLPI VF+ + G LK+VI G+N GT V
Sbjct: 195 KVMDATAISLCRENKLPIIVFNSLVEGNLKKVIMGENIGTTV 236
>gi|410632359|ref|ZP_11343020.1| small subunit ribosomal protein S2 [Glaciecola arctica BSs20135]
gi|410148129|dbj|GAC19887.1| small subunit ribosomal protein S2 [Glaciecola arctica BSs20135]
Length = 243
Score = 236 bits (602), Expect = 5e-59, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 156/217 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ ++ + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNEALNFVGGIASKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + + A + ++++RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASDAVKDAADKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL +GGIKNM +PD +F++D + A++EA L IP++ +VD
Sbjct: 129 LTKKEVLMLTREMTKLETSLGGIKNMGGLPDVLFVVDADHEHIAITEAGNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG++Y++PGNDD+ +++ LY DA + +
Sbjct: 189 TNSNPDGVDYIVPGNDDAIRAVQLYLNAAADAVIAGR 225
>gi|298370311|ref|ZP_06981627.1| stringent starvation protein A [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281771|gb|EFI23260.1| stringent starvation protein A [Neisseria sp. oral taxon 014 str.
F0314]
Length = 201
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLILYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDLILYESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F + +LE +++ K +ARE I + L LAP F KNKY+
Sbjct: 85 VMRGRGRLVLYRMEKELFSLVQVLETP--ESTNKEQAKAREAIGNGLTLLAPSFAKNKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV ++PLLWRLDYY I L K+A+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 143 LGDDFSMIDVALSPLLWRLDYYDIKLGKTAAPLLKYAERIFQREAFIEALTPAEKAMR 200
>gi|310823275|ref|YP_003955633.1| uridylate kinase [Stigmatella aurantiaca DW4/3-1]
gi|309396347|gb|ADO73806.1| Uridylate kinase [Stigmatella aurantiaca DW4/3-1]
Length = 249
Score = 236 bits (602), Expect = 5e-59, Method: Composition-based stats.
Identities = 115/223 (51%), Positives = 158/223 (70%), Gaps = 1/223 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ + I SE+ E+ +E+A+VIGGGNI RG++ + +DR++AD
Sbjct: 19 GEALMGDGKYGIHPPTLSRIASEVKELTEASVEVALVIGGGNIFRGVAGATEGMDRASAD 78
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT INS+A+ D L K G+ + V+SAI +E+ E YI A+++LE+G+VVIFA G
Sbjct: 79 YMGMLATCINSMAMQDALEKQGVHTRVLSAIKMEQIAEPYIRRRAVRHLEKGRVVIFAAG 138
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT A+LRA EI AE+ILKATKVDG+YN+DP K +A Y+ +T+ +V+ + L
Sbjct: 139 TGNPYFTTDTAASLRAMEINAEVILKATKVDGVYNADPKKDPTARRYRSLTYLDVLKQDL 198
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNE-GTLV 821
+MDSTA S CRD KLPI VF + G + R + G + GT+V
Sbjct: 199 NVMDSTAISLCRDNKLPILVFDLTVRGNIGRAVLGTGDIGTVV 241
>gi|424836688|ref|ZP_18261325.1| 30S ribosomal protein S2 [Shigella flexneri 5a str. M90T]
gi|110613769|gb|ABF02436.1| 30S ribosomal subunit protein S2 [Shigella flexneri 5 str. 8401]
gi|383465740|gb|EID60761.1| 30S ribosomal protein S2 [Shigella flexneri 5a str. M90T]
Length = 307
Score = 236 bits (602), Expect = 5e-59, Method: Composition-based stats.
Identities = 116/254 (45%), Positives = 172/254 (67%), Gaps = 12/254 (4%)
Query: 166 YMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAI 221
Y+E L A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+
Sbjct: 61 YIEVLIMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEAL 120
Query: 222 RYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRL 281
+ ++ KG +LFVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RL
Sbjct: 121 AELNKIVSRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRL 180
Query: 282 KEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVS 341
K+++ +G+ KL+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+
Sbjct: 181 KDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIK 240
Query: 342 EAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKT 401
EA L IP+ +VDTN PDG+++VIPGNDD+ +++ LY + A TV E RS+
Sbjct: 241 EANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV------AATVREGRSQD 294
Query: 402 LAPIMECKKALIEA 415
LA + +++ +EA
Sbjct: 295 LAS--QAEESFVEA 306
>gi|354581546|ref|ZP_09000450.1| ribosomal protein S2 [Paenibacillus lactis 154]
gi|353201874|gb|EHB67327.1| ribosomal protein S2 [Paenibacillus lactis 154]
Length = 232
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 157/217 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ + GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAFNFVKSIAAENGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R GM +I+QRWLGG LTNF+TI+ I RLK+++ + +G+ +
Sbjct: 68 LFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRINRLKQLESWEEDGTFQ 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L +++ +L + +GGIKNM +P A+F+ID + AV+EA KL IPI+G+V
Sbjct: 128 VLPKKEVILLRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEA 224
>gi|138894769|ref|YP_001125222.1| 30S ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2]
gi|166225274|sp|A4IMC3.1|RS2_GEOTN RecName: Full=30S ribosomal protein S2
gi|134266282|gb|ABO66477.1| Ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2]
Length = 235
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RL+E++
Sbjct: 62 GNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G L KKE + +++ +L + +GGIK+M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|254421906|ref|ZP_05035624.1| uridylate kinase [Synechococcus sp. PCC 7335]
gi|196189395|gb|EDX84359.1| uridylate kinase [Synechococcus sp. PCC 7335]
Length = 242
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 165/237 (69%), Gaps = 2/237 (0%)
Query: 587 KEYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGI 646
K Y +LK GEALM AY I+ +I+ I EIS +V+ GI+LAIV+GGGNI RG+
Sbjct: 3 KPYQRVLLKLS--GEALMGELAYGIDPAIVDAIAKEISGVVAEGIQLAIVVGGGNIFRGV 60
Query: 647 SNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+DR+TADY+GM+ATI+N++ L D L + + + V +AIS+++ E YI AI+
Sbjct: 61 KGSSAGMDRATADYIGMIATIMNAMTLQDALERIDVPTRVQTAISMQELAEPYIRRRAIR 120
Query: 707 YLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
+LE+ +VVIF GG GNPFFTTDTTAALRAAEI AE++ KATKVDG+Y+SDP A Y
Sbjct: 121 HLEKNRVVIFGGGSGNPFFTTDTTAALRAAEISAEVLFKATKVDGVYDSDPTTNADAKQY 180
Query: 767 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 823
K +T+ V++K L++MD TA + C+D +PIRVF++ G + R + G+ GT+V E
Sbjct: 181 KSLTYSHVLAKDLKVMDGTAIALCKDNNIPIRVFNLSIRGNINRAMMGEPIGTIVGE 237
>gi|400406465|ref|YP_006589213.1| ribosomal protein S2 [secondary endosymbiont of Heteropsylla
cubana]
gi|400364718|gb|AFP85785.1| ribosomal protein S2 [secondary endosymbiont of Heteropsylla
cubana]
Length = 243
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/236 (46%), Positives = 161/236 (68%), Gaps = 6/236 (2%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M + ++QAG HFGHQTR+W+PKM +IF RNK+HIINLEKT+++++ A+ + +
Sbjct: 1 MATTISIRDLLQAGAHFGHQTRYWSPKMKDFIFTARNKVHIINLEKTVFLFQSALMELNK 60
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ + KG +LFVGTKR A I AV F++ RWLGG+LTN+KT++ SI+RLK++++
Sbjct: 61 IAYRKGKILFVGTKRAANNAIQEAAVSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEI 120
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+ KL+KKEAL+ R+ KL + +GGIKNM +PDA+F+ID + A++EA L
Sbjct: 121 QSQDGTFEKLTKKEALIRTRELEKLEKSLGGIKNMGGLPDALFVIDAEHEHIAINEANNL 180
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTL 402
IP+ VVDTN +P GI+++IPGNDD+ ++I LY + A TV E R L
Sbjct: 181 GIPVFSVVDTNCNPAGIDFIIPGNDDAIRAINLYLNAV------ATTVREGRHHAL 230
>gi|21674595|ref|NP_662660.1| 30S ribosomal protein S2 [Chlorobium tepidum TLS]
gi|25009198|sp|Q8KBK6.1|RS2_CHLTE RecName: Full=30S ribosomal protein S2
gi|21647794|gb|AAM73002.1| ribosomal protein S2 [Chlorobium tepidum TLS]
Length = 249
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 157/221 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
E++++AGVHFGH R WNPKM YIF +N +HII+L+KTL M E+A++ I + +
Sbjct: 8 EEMLRAGVHFGHLARRWNPKMKPYIFMEKNGVHIIDLKKTLVMAEEALKAIEAIASTGRE 67
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
++ VGTK+QA+ +IA +A RAGMP++ +RWLGG+LTNF TI+ SI+R+ ++ T+G+
Sbjct: 68 IMLVGTKKQAKVIIAEQAERAGMPYVCERWLGGMLTNFSTIRQSIRRMNAIERMETDGTF 127
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
++KKE L+ R++ KL R++GGI NMN +P A+F++D+ AV EA L IPI +
Sbjct: 128 DMITKKERLMLIREKDKLVRILGGIANMNRLPAALFVVDIKKEHIAVKEARSLGIPIFAM 187
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 394
VDTN PD ++YVIP NDD+ +SI L K + D L+A+T+
Sbjct: 188 VDTNCDPDEVDYVIPANDDAIRSIDLMVKAVADTILEARTL 228
>gi|255067275|ref|ZP_05319130.1| UMP kinase [Neisseria sicca ATCC 29256]
gi|255048426|gb|EET43890.1| UMP kinase [Neisseria sicca ATCC 29256]
Length = 301
Score = 236 bits (602), Expect = 5e-59, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 68 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 125
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 126 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 185
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 186 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 245
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K G+LKRVI G++EGTLV+
Sbjct: 246 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKQGSLKRVITGEDEGTLVH 300
>gi|254368535|ref|ZP_04984551.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121438|gb|EDO65629.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp.
holarctica FSC022]
Length = 239
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 ILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVAI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|253573553|ref|ZP_04850896.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251847081|gb|EES75086.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 232
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 158/217 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKRIAEENGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA RAG +I+QRWLGG LTNF+TI+ I+RLK+++ + +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERAGQFYINQRWLGGTLTNFQTIQKRIERLKQLETWEEDGTFS 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE ++ +++ +L + +GGIKNM +P A+F+ID + AV+EA KL IPI+G+V
Sbjct: 128 VLPKKEVIILRKEKERLEKFLGGIKNMKSLPSALFVIDPRKERIAVAEARKLGIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEA 224
>gi|334139064|ref|ZP_08512463.1| UMP kinase [Paenibacillus sp. HGF7]
gi|333603242|gb|EGL14661.1| UMP kinase [Paenibacillus sp. HGF7]
Length = 241
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEAL + I S II +I ++ ++V G+E+AIV+GGGNI RGI+ + IDR+TAD
Sbjct: 15 GEALAGQQGFGIESDIISSIALQVKDVVDLGVEVAIVVGGGNIWRGIAGSAKGIDRATAD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++NSLA+ D L G+ + V S+IS+++ E YI AI++LE+G+VVIFA G
Sbjct: 75 YMGMLATVMNSLAMQDALENIGVPTRVQSSISMQQVAEPYIRRRAIRHLEKGRVVIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKA-TKVDGIYNSDPNKCLSAIIYKKITFDEVISKK 778
GNP+F+TDTTAALRAAEI+AE+IL A KVDG+Y++DP K +A Y+ +T+ EV++K
Sbjct: 135 TGNPYFSTDTTAALRAAEIEAEVILMAKNKVDGVYSADPFKDETAEKYETLTYLEVLNKN 194
Query: 779 LEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
L +MDSTA S C D +P+ VFSI ++G +KRV+ G+ GT+V
Sbjct: 195 LGVMDSTASSLCMDNNIPLIVFSITENGNIKRVVLGEKIGTIV 237
>gi|197286131|ref|YP_002152003.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320]
gi|227357250|ref|ZP_03841607.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906]
gi|425069035|ref|ZP_18472151.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW6]
gi|425071436|ref|ZP_18474542.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW4]
gi|238690101|sp|B4F2D3.1|RS2_PROMH RecName: Full=30S ribosomal protein S2
gi|194683618|emb|CAR44518.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320]
gi|227162513|gb|EEI47502.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906]
gi|404598333|gb|EKA98812.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW6]
gi|404599243|gb|EKA99703.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW4]
Length = 241
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 164/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALVELNKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDGI+Y+IPGNDD+ +++ LY A V E RS+ LA ++ ++ L+EA
Sbjct: 189 TNSDPDGIDYIIPGNDDAIRAVKLYLTAA------ATAVREGRSQDLA--VQAEEGLVEA 240
>gi|89255658|ref|YP_513019.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
LVS]
gi|115314159|ref|YP_762882.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
OSU18]
gi|254367049|ref|ZP_04983085.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
257]
gi|290953223|ref|ZP_06557844.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
URFT1]
gi|394894374|ref|YP_001427673.2| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|422938154|ref|YP_007011301.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049968|ref|YP_007008402.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
F92]
gi|122325797|sp|Q0BNT9.1|RS2_FRATO RecName: Full=30S ribosomal protein S2
gi|122999778|sp|Q2A5I2.1|RS2_FRATH RecName: Full=30S ribosomal protein S2
gi|209573719|sp|A7N9R4.2|RS2_FRATF RecName: Full=30S ribosomal protein S2
gi|89143489|emb|CAJ78665.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
LVS]
gi|115129058|gb|ABI82245.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica
OSU18]
gi|134252875|gb|EBA51969.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
257]
gi|407293305|gb|AFT92211.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FSC200]
gi|421950690|gb|AFX69939.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
F92]
Length = 239
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 ILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVAI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|291533219|emb|CBL06332.1| SSU ribosomal protein S2P [Megamonas hypermegale ART12/1]
Length = 243
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 158/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM+ YIF RN I+II+L+KT+ ++A ++ + ++
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYDFLRSVAEEGKSI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA+++GM ++++RWLGG++TNF TI+ SI RLKE++ +G+
Sbjct: 68 LFVGTKKQAQEAVKEEALKSGMFYVNERWLGGMMTNFATIRKSINRLKELEAMEEDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L R+Q KL + +GGIK+M +P A+FI+D + AV+EA KLNIPI+ +V
Sbjct: 128 VLSKKEVLALKREQEKLEKSLGGIKDMEELPGALFIVDPRKERIAVAEAKKLNIPIVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN PD I+YVIPGNDD+ +++ L T + DA ++ +
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTSRMADAVIEGR 225
>gi|408356834|ref|YP_006845365.1| 30S ribosomal protein S2 [Amphibacillus xylanus NBRC 15112]
gi|407727605|dbj|BAM47603.1| 30S ribosomal protein S2 [Amphibacillus xylanus NBRC 15112]
Length = 260
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 159/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ M + A +I ++ + G++
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKMVDVAYNFIREVAENGGSV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ I EA+R+G +I+QRWLGG LTNF+TI+ SI RLK+++ +G+
Sbjct: 68 LFVGTKKQAQEAIKEEAIRSGQYYINQRWLGGTLTNFETIRKSINRLKDIERMEEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE + +++ +L + +GGIK+M +PD +F++D + AV+EA KLNIPI+G+V
Sbjct: 128 VLPKKETVNLLKEKDRLVKFLGGIKDMKKLPDVLFVVDPRKERIAVAEAKKLNIPIVGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN PD I+YVIP NDD+ +++ L T + DA L+AK
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTSTMADAILEAK 225
>gi|418289271|ref|ZP_12901630.1| UMP kinase [Neisseria meningitidis NM233]
gi|418291522|ref|ZP_12903515.1| UMP kinase [Neisseria meningitidis NM220]
gi|372199729|gb|EHP13927.1| UMP kinase [Neisseria meningitidis NM220]
gi|372199961|gb|EHP14109.1| UMP kinase [Neisseria meningitidis NM233]
Length = 302
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 171/235 (72%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 69 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 126
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 127 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 186
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 187 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 246
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE + K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 247 TITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVH 301
>gi|325268000|ref|ZP_08134647.1| stringent starvation protein A [Kingella denitrificans ATCC 33394]
gi|324980541|gb|EGC16206.1| stringent starvation protein A [Kingella denitrificans ATCC 33394]
Length = 201
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 141/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF I+DID+FNKP+++ MNPY +VP+LVERDL+LYESNIINEYIDERFP+PQLM +DP
Sbjct: 25 MDFTIKDIDVFNKPEDLAVMNPYNEVPVLVERDLVLYESNIINEYIDERFPHPQLMPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F+H+ LEN + ++ ARE I L +AP F KNKY+
Sbjct: 85 VMRGRGRLVLHRLEKELFVHVKTLENPSSTAKMQA--AAREAIASGLTMIAPAFAKNKYV 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSM+DV +APLLWRLD+Y I L K+A+P++K AERIF R +++++LTPAEK M+
Sbjct: 143 LGDDFSMIDVALAPLLWRLDHYDIKLGKAAAPILKSAERIFQRQAFIDALTPAEKAMR 200
>gi|334130674|ref|ZP_08504465.1| SspA protein [Methyloversatilis universalis FAM5]
gi|333444241|gb|EGK72196.1| SspA protein [Methyloversatilis universalis FAM5]
Length = 227
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 108/178 (60%), Positives = 141/178 (79%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDF++ D+DL+NKP++I +NPY +VP+LV+RDLILY+SNIINEYIDERFP+PQLM DP
Sbjct: 54 MDFQVIDVDLYNKPEDIAVINPYNRVPVLVDRDLILYDSNIINEYIDERFPHPQLMPPDP 113
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L E E+F H+ LE + + ++R +RDRL L +F K KYM
Sbjct: 114 IMRARARQLLHTVESELFSHIEALEK-----NARTADKSRSHLRDRLTELTAIFAKQKYM 168
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG+EFSMLDV IAPLLWRLD+YGI L KSA+PL+KYAERIFSR ++++LTP+EK+M+
Sbjct: 169 LGEEFSMLDVAIAPLLWRLDHYGIELPKSAAPLMKYAERIFSRQGFIDALTPSEKVMR 226
>gi|229918655|ref|YP_002887301.1| 30S ribosomal protein S2 [Exiguobacterium sp. AT1b]
gi|259495214|sp|C4L650.1|RS2_EXISA RecName: Full=30S ribosomal protein S2
gi|229470084|gb|ACQ71856.1| ribosomal protein S2 [Exiguobacterium sp. AT1b]
Length = 246
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 158/219 (72%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQTR WNPKM+ YIF RN I+II+L+KT+ ++A ++ +L G
Sbjct: 7 KQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFVRELAAEGGN 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ I EA+R+GM FI++RWLGG LTNF TIK I RLK+++ +G+
Sbjct: 67 VLFVGTKKQAQDTIKEEAIRSGMFFINERWLGGTLTNFSTIKKRINRLKQLEKMEEDGTF 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L KKE ++ ++ +L + +GGIK+M +PDA+FI+D + A++EA KLNIPI+ +
Sbjct: 127 EVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLNIPIVAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN PD I+YVIP NDD+ +++ L T + DA ++AK
Sbjct: 187 VDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIIEAK 225
>gi|156252211|gb|ABU60717.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 236
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 2 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 61
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 62 ILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 121
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 122 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVAI 181
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 182 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 220
>gi|421539074|ref|ZP_15985245.1| UMP kinase [Neisseria meningitidis 93003]
gi|402315186|gb|EJU50752.1| UMP kinase [Neisseria meningitidis 93003]
Length = 239
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 184 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVH 238
>gi|154686066|ref|YP_001421227.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens FZB42]
gi|308173612|ref|YP_003920317.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7]
gi|375362294|ref|YP_005130333.1| 30S ribosomal protein S2 BS1 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384159368|ref|YP_005541441.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens TA208]
gi|384164198|ref|YP_005545577.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens LL3]
gi|384168414|ref|YP_005549792.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens XH7]
gi|384265233|ref|YP_005420940.1| 30S ribosomal protein S2 BS1 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898231|ref|YP_006328527.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens Y2]
gi|394993992|ref|ZP_10386729.1| 30S ribosomal protein S2 [Bacillus sp. 916]
gi|421731679|ref|ZP_16170802.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429505203|ref|YP_007186387.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451346978|ref|YP_007445609.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens IT-45]
gi|452855596|ref|YP_007497279.1| ribosomal protein S2 [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|166225239|sp|A7Z4S0.1|RS2_BACA2 RecName: Full=30S ribosomal protein S2
gi|154351917|gb|ABS73996.1| RpsB [Bacillus amyloliquefaciens FZB42]
gi|307606476|emb|CBI42847.1| ribosomal protein S2 [Bacillus amyloliquefaciens DSM 7]
gi|328553456|gb|AEB23948.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens TA208]
gi|328911753|gb|AEB63349.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens LL3]
gi|341827693|gb|AEK88944.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens XH7]
gi|371568288|emb|CCF05138.1| 30S ribosomal protein S2 BS1 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380498586|emb|CCG49624.1| 30S ribosomal protein S2 BS1 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172341|gb|AFJ61802.1| small subunit ribosomal protein S2 [Bacillus amyloliquefaciens Y2]
gi|393805186|gb|EJD66568.1| 30S ribosomal protein S2 [Bacillus sp. 916]
gi|407073892|gb|EKE46882.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429486793|gb|AFZ90717.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449850736|gb|AGF27728.1| 30S ribosomal protein S2 [Bacillus amyloliquefaciens IT-45]
gi|452079856|emb|CCP21614.1| ribosomal protein S2 [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 246
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 158/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A + L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G +LFVGTK+QA+ + EAVR+GM +++QRWLGG LTNF+TI+ I+RLK+++
Sbjct: 62 AEGGKILFVGTKKQAQDSVKEEAVRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKMQ 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
NG+ L KKE + ++ +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 ENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAK 225
>gi|89075420|ref|ZP_01161837.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34]
gi|89048836|gb|EAR54406.1| 30S ribosomal protein S2 [Photobacterium sp. SKA34]
Length = 242
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ A+ I ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+ K
Sbjct: 69 FVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+I A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG+++VIPGNDD+ ++I LYT + A+TV E R++ +A
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAIQLYTGAV------AQTVKEARNQDIA 230
>gi|387823796|ref|YP_005823267.1| 30S ribosomal protein S2 [Francisella cf. novicida 3523]
gi|328675395|gb|AEB28070.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida 3523]
Length = 239
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ ++ EA R GMP++ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 ILFVGTKRQAQDIVEAEAKRCGMPYVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVSI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSTPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|254229485|ref|ZP_04922899.1| ribosomal protein S2 [Vibrio sp. Ex25]
gi|151937950|gb|EDN56794.1| ribosomal protein S2 [Vibrio sp. Ex25]
Length = 253
Score = 236 bits (601), Expect = 6e-59, Method: Composition-based stats.
Identities = 118/257 (45%), Positives = 172/257 (66%), Gaps = 11/257 (4%)
Query: 163 RPSYMESLTPA----EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYE 218
RP+ +E A +++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+
Sbjct: 3 RPNPIEEFKMATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFN 62
Query: 219 KAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSI 278
A+ + ++G KG +LFVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI
Sbjct: 63 DALAELAKVGEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSI 122
Query: 279 QRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+RLK+++ +G+ KL+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID +
Sbjct: 123 KRLKDLETQSQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHI 182
Query: 339 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELR 398
A+ EA L IP+ VVDTN +PDG++YVIPGNDD+ +++ LY A V E R
Sbjct: 183 AIKEANNLGIPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAA------ASAVSEGR 236
Query: 399 SKTLAPIMECKKALIEA 415
+K +A + E K +EA
Sbjct: 237 NKDVAAVAE-KDGFVEA 252
>gi|71730819|gb|EAO32891.1| Aspartate/glutamate/uridylate kinase [Xylella fastidiosa Ann-1]
Length = 243
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 153/224 (68%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I + E+ E + G ELA+VIGGGNI RG + +DR T D
Sbjct: 15 GEALMGSADYGIDPKVINRLAGEVIEAQNAGAELALVIGGGNIFRGAGLAAKGMDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLATIIN+LA+ D L K G VMSAI I E +I AI++LE+ ++ IFA G
Sbjct: 75 HMGMLATIINALAMQDALEKLGTKVRVMSAIKINNVCEDFIRRRAIRHLEKSRITIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ AALRA EI A+++LKATKVDGIYN DP K A+ Y +++DEVIS+ L
Sbjct: 135 TGNPFFTTDSGAALRAIEIGADLLLKATKVDGIYNKDPQKHCDAVKYSTLSYDEVISQNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 823
E+MD+ AF+ RD LP+R+F+I + G L R++ G+ GTLV E
Sbjct: 195 EVMDTAAFALARDSNLPLRIFNIEQPGVLLRILHGEEIGTLVKE 238
>gi|347727010|gb|AEP19863.1| ribosomal protein S2 [Exiguobacterium sp. 11-28]
gi|347727074|gb|AEP19895.1| ribosomal protein S2 [Exiguobacterium sp. N39]
Length = 246
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 158/219 (72%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQTR WNPKM+ YIF RN I+II+L+KT+ ++A ++ +L G
Sbjct: 7 KQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFVRELAAEGGN 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ I EA+R+GM FI++RWLGG LTNF TIK I RLK+++ +G+
Sbjct: 67 VLFVGTKKQAQDTIKEEALRSGMYFINERWLGGTLTNFSTIKKRINRLKQLEKMEADGTF 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L KKE ++ ++ +L + +GGIK+M +PDA+FI+D + A++EA KLNIPI+ +
Sbjct: 127 EVLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLNIPIVAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN PD I+YVIP NDD+ +++ L T + DA ++AK
Sbjct: 187 VDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAIIEAK 225
>gi|237757011|ref|ZP_04585466.1| UMP kinase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237690829|gb|EEP59982.1| UMP kinase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 236
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 161/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ + + EI ++ G+++AIVIGGGNI RGI +DR+TAD
Sbjct: 14 GEALMGDQEYGIDPHFVSELCDEIKDVYEIGVQIAIVIGGGNIFRGIQGTEIGMDRATAD 73
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGMLAT++N+LAL D+L K + + VMSAI + + E YI AI++LE+G++VIFA G
Sbjct: 74 YMGMLATVMNALALQDVLEKKDVPTRVMSAIEMRQIAEPYIRRRAIRHLEKGRIVIFAAG 133
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
G+PFFTTDTT ALRAAEIKA+I+LKATKVDG+Y+ DP K A + K+I++ + I+K L
Sbjct: 134 TGSPFFTTDTTGALRAAEIKADILLKATKVDGVYDKDPEKYPDAKLLKEISYLDAINKNL 193
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD TA + C + +LPI VF+I K G L++++ G++ G++V
Sbjct: 194 KVMDHTAITLCMENRLPIGVFNIKKKGNLRKIVFGEDVGSIV 235
>gi|404493559|ref|YP_006717665.1| 30S ribosomal protein S2 [Pelobacter carbinolicus DSM 2380]
gi|123743012|sp|Q3A395.1|RS2_PELCD RecName: Full=30S ribosomal protein S2
gi|77545600|gb|ABA89162.1| ribosomal protein S2 [Pelobacter carbinolicus DSM 2380]
Length = 267
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 162/244 (66%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ ++ A ++I + +
Sbjct: 7 KQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYQFIRETVQNGDK 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ I E RA +ID RWLGG+LTNF TIK SI+RLK++++ +G+
Sbjct: 67 VLFVGTKKQAQEAIREETARADQFYIDNRWLGGMLTNFATIKKSIERLKKIEVMAQDGTY 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKEAL R++ KL + +GGIK MN +P AIF+ID AV EA KL IP++ V
Sbjct: 127 ELLTKKEALNLEREREKLEKTLGGIKGMNKLPGAIFVIDPKKETIAVKEARKLGIPVVAV 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALI 413
VDTN PD I+Y+IPGNDD+ ++I L+ + DA +D E + + E K +
Sbjct: 187 VDTNCDPDDIDYIIPGNDDAIRAIRLFAAKMADACIDGAQAREAAIRAESDKAETDKVEV 246
Query: 414 EANG 417
E G
Sbjct: 247 EGKG 250
>gi|299823055|ref|ZP_07054941.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601]
gi|299816584|gb|EFI83822.1| 30S ribosomal protein S2 [Listeria grayi DSM 20601]
Length = 253
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 155/223 (69%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ ++A ++ ++ GT+
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVAADNGTI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R+G +++ RWLGG LTNF TIK IQ LK+++ +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERSGQYYVNHRWLGGTLTNFDTIKKRIQHLKKIEKMAEDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++Q KL R +GGIK M IPDA+FI+D + AV+EA KLNIPIIG+V
Sbjct: 128 VLPKKEVVLLKKEQEKLERFLGGIKEMKGIPDAMFIVDPRKERIAVAEARKLNIPIIGIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGEL 397
DTN PD I+YVIP NDD+ +++ L T + DA ++ EL
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEEL 230
>gi|296313917|ref|ZP_06863858.1| stringent starvation protein A [Neisseria polysaccharea ATCC 43768]
gi|296839452|gb|EFH23390.1| stringent starvation protein A [Neisseria polysaccharea ATCC 43768]
Length = 201
Score = 236 bits (601), Expect = 7e-59, Method: Composition-based stats.
Identities = 109/178 (61%), Positives = 142/178 (79%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D++NKP+++ MNPY QVP+LVERDL+L+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H +LEN + K +ARE I + L LAP F K+KY+
Sbjct: 85 VMRGRGRLVLYRMEKELFNHAQVLENP--AATNKEQAKAREAIGNGLTMLAPSFSKSKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSM+DV +APLLWRLD+Y + L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 143 LGEDFSMIDVALAPLLWRLDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 200
>gi|196247608|ref|ZP_03146310.1| ribosomal protein S2 [Geobacillus sp. G11MC16]
gi|196212392|gb|EDY07149.1| ribosomal protein S2 [Geobacillus sp. G11MC16]
Length = 235
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 159/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ G +LFVGTK+QA+ + EA R GM +++QRWLGG LTNF TI+ I+RL+E++
Sbjct: 62 GNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G L KKE + +++ +L + +GGIK+M +PDA+F+ID + AV+EA KLNI
Sbjct: 122 EDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+YVIP NDD+ +++ L T I DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAK 225
>gi|187932155|ref|YP_001892140.1| 30S ribosomal protein S2 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187713064|gb|ACD31361.1| 30S ribosomal protein S2 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 239
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 156/219 (71%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
++FVGTKRQA+ ++ EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G++
Sbjct: 65 IIFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGTL 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 ESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVAI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|442608812|ref|ZP_21023554.1| SSU ribosomal protein S2p (SAe) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441749861|emb|CCQ09616.1| SSU ribosomal protein S2p (SAe) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 242
Score = 236 bits (601), Expect = 7e-59, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 157/217 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQ R+WNPKM +IFG RN++HIINLEKT+ M+ A++++ + +KG +L
Sbjct: 9 MLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLSNVASNKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A +++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAATGCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFEK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP++ +VD
Sbjct: 129 LTKKEALMLTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIREANNLGIPVVSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +PDG+++V+PGNDD+ ++I LYT + A + +
Sbjct: 189 TNSNPDGVDFVVPGNDDAIRAIQLYTGAVAQAVTEGR 225
>gi|358635899|dbj|BAL23196.1| stringent starvation protein A [Azoarcus sp. KH32C]
Length = 199
Score = 235 bits (600), Expect = 7e-59, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 147/178 (82%), Gaps = 4/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFE+ D+DL+NKP++I +NPY +VP+LV+RDL+LYESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEVIDVDLYNKPEDIAVINPYNRVPVLVDRDLVLYESNIINEYIDERFPHPQLMPPDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MRARAR +L FE E+F H+ +L E+N+ + ++R +RD+L+ L+P+F K K+M
Sbjct: 85 IMRARARQLLHTFEHELFSHIEVL--EKNQKGV--VDKSRAHVRDQLVQLSPIFTKQKFM 140
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LGD+FSMLDV IAPLLWRL++YGI L K+A+ L+KYAERIFSR ++++LTP+EK+M+
Sbjct: 141 LGDDFSMLDVAIAPLLWRLEHYGIELPKAAANLMKYAERIFSRQGFIDALTPSEKVMR 198
>gi|240015551|ref|ZP_04722091.1| uridylate kinase [Neisseria gonorrhoeae FA6140]
gi|293397990|ref|ZP_06642196.1| UMP kinase [Neisseria gonorrhoeae F62]
gi|291611936|gb|EFF41005.1| UMP kinase [Neisseria gonorrhoeae F62]
Length = 239
Score = 235 bits (600), Expect = 7e-59, Method: Composition-based stats.
Identities = 127/235 (54%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+EIV G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEIVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 TQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K G+LKRVI G++EGTLV+
Sbjct: 184 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKQGSLKRVITGEDEGTLVH 238
>gi|253700110|ref|YP_003021299.1| 30S ribosomal protein S2 [Geobacter sp. M21]
gi|259495215|sp|C6E512.1|RS2_GEOSM RecName: Full=30S ribosomal protein S2
gi|251774960|gb|ACT17541.1| ribosomal protein S2 [Geobacter sp. M21]
Length = 255
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 157/230 (68%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ + T
Sbjct: 7 KELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDAAQAGET 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ +A EA R G +++ RWLGG+LTNF T+K SI RLK +D I +G+I
Sbjct: 67 VLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAMIADGTI 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
+KKE L +++ KL + +GGIK M +P +F++D + AVSEA KL IP++ +
Sbjct: 127 EAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLGIPVVAI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
VDTN PD INYVIPGNDD+ ++I L T + DA L+ R +T A
Sbjct: 187 VDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGGQARNARLQTGA 236
>gi|21672506|ref|NP_660573.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009196|sp|Q8K9T0.1|RS2_BUCAP RecName: Full=30S ribosomal protein S2
gi|21623126|gb|AAM67784.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 244
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 150/209 (71%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKTL M+ A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTLPMFNFALSELKKISLKKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ +++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASKKIKETALNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETESQDGTFSK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
++KKEAL+ R+ KL +GGIKNM +PD +F+ID + A+ EA L IP+ +VD
Sbjct: 129 ITKKEALIRTRELSKLENSLGGIKNMGGLPDCLFVIDAAHENIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGI 384
TN +PDG++YVIPGNDD+ +S+ LY + +
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRSVTLYLQAV 217
>gi|335419069|ref|ZP_08550127.1| uridylate kinase [Salinisphaera shabanensis E1L3A]
gi|334897204|gb|EGM35340.1| uridylate kinase [Salinisphaera shabanensis E1L3A]
Length = 247
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 112/222 (50%), Positives = 162/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I++ +++ + +EI E++ G+++A+V+GGGNI RG+ + +DR T D
Sbjct: 17 GEALMGQADYGISADVVERLAAEIKELIESGVQVALVVGGGNIFRGVGLAGRGMDRVTGD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
MGMLAT+IN+L L D + +G+ + VMSAI I + E YI AI++LE+G+VVIFA G
Sbjct: 77 QMGMLATVINALGLQDAIEHAGMTARVMSAIRINQVCEDYIRRRAIRHLEKGRVVIFAAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ A+LRA EI A+++LKATKVDGIY++DP + SA Y +T+DEVI ++L
Sbjct: 137 TGNPFFTTDSAASLRAVEINADLMLKATKVDGIYSADPMRDSSAKRYTHLTYDEVIDQRL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+MD+TA CRD +P+RVF I ++G L R++ G++ GTLV
Sbjct: 197 SVMDTTAIVLCRDNGMPLRVFDINRAGDLARIVAGEDVGTLV 238
>gi|15837660|ref|NP_298348.1| uridylate kinase [Xylella fastidiosa 9a5c]
gi|22654023|sp|Q9PEH0.1|PYRH_XYLFA RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|9106002|gb|AAF83868.1|AE003942_12 uridylate kinase [Xylella fastidiosa 9a5c]
Length = 247
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 152/224 (67%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I + E+ E + G ELA+VIGGGNI RG + +DR T D
Sbjct: 19 GEALMGSADYGIDPKVINRLAGEVIEAQNAGAELALVIGGGNIFRGAGLAAKGMDRVTGD 78
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLATIIN+LA+ D L K G VMSAI I E +I AI++LE+ ++ IFA G
Sbjct: 79 HMGMLATIINALAMQDALEKLGTKVRVMSAIKINNVCEDFIRRRAIRHLEKSRITIFAAG 138
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ AALRA EI A+++LKATKVDGIYN DP K A+ Y +++DEVIS+ L
Sbjct: 139 TGNPFFTTDSGAALRAIEIGADLLLKATKVDGIYNKDPQKHCDAVKYSTLSYDEVISQNL 198
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 823
E+MD+ AF+ RD LP+R+F I + G L R++ G+ GTLV E
Sbjct: 199 EVMDTAAFALARDSNLPLRIFDIEQPGVLLRILHGEEIGTLVKE 242
>gi|32491141|ref|NP_871395.1| 30S ribosomal protein S2 [Wigglesworthia glossinidia endosymbiont
of Glossina brevipalpis]
gi|31340384|sp|Q8D2G2.1|RS2_WIGBR RecName: Full=30S ribosomal protein S2
gi|25166348|dbj|BAC24538.1| rpsB [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 240
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 154/217 (70%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++Q+GVHFGHQTR+WNP M +IF +NK+HIINLEKTL M+E A+ + ++ G +L
Sbjct: 9 MIQSGVHFGHQTRYWNPNMKPFIFCKKNKVHIINLEKTLIMFEIAMNELSKISKRDGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
F+GTKR A I N A+ F++ RWLGG+LTN+KT++ SI+RLKE++ +G+ +K
Sbjct: 69 FIGTKRAASEAIKNSAINCNQFFVNYRWLGGMLTNWKTVRQSIKRLKELESQSKDGTFKK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R KL +GGIKNM +PDAIF+IDV + K ++ EA KL IPI +VD
Sbjct: 129 LTKKEALIRTRTLNKLENSLGGIKNMGGLPDAIFVIDVEHEKTSIKEANKLGIPIFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
TN +P I +VIPGNDDS ++I LY K + + ++K
Sbjct: 189 TNSNPKDIKFVIPGNDDSIRAIDLYLKTVSETIKNSK 225
>gi|387127008|ref|YP_006295613.1| uridylate kinase [Methylophaga sp. JAM1]
gi|386274070|gb|AFI83968.1| Uridylate kinase [Methylophaga sp. JAM1]
Length = 241
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 114/222 (51%), Positives = 157/222 (70%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I +I EI+E+ + G++L IVIGGGNI RG +DR +AD
Sbjct: 19 GEALMGNAEYGIQPEVISRFAQEITELNAQGVQLGIVIGGGNIFRGAGLAASGMDRVSAD 78
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT++N+LAL D L ++G VMSAI I + E Y+ AI++LE+G+VVIFA G
Sbjct: 79 HMGMLATVLNALALQDALERNGTFCRVMSAIRIHEVCEDYLRRRAIRHLEKGRVVIFAAG 138
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ A+LRA EI AE++LKAT+VDG+Y++DP K A+ Y +++DEVI+ +L
Sbjct: 139 TGNPFFTTDSAASLRAVEIGAELMLKATQVDGVYDADPRKNPDAVRYDTLSYDEVINNRL 198
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+MD+TA C++QK+P+RVF + K G L ++ GKN GTLV
Sbjct: 199 GVMDTTAVVMCQEQKMPLRVFDVHKYGNLTDILYGKNVGTLV 240
>gi|410636558|ref|ZP_11347151.1| small subunit ribosomal protein S2 [Glaciecola lipolytica E3]
gi|410143840|dbj|GAC14356.1| small subunit ribosomal protein S2 [Glaciecola lipolytica E3]
Length = 243
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 153/212 (72%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ ++ +A+ YI + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPLFNEALNYISGVSAKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A + ++++RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASDAVKEAAQKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKE L+ R+ KL +GGIK+M +PD +F+ID + A++EA L IP+I VVD
Sbjct: 129 LTKKEVLMLQREMTKLESSLGGIKDMGGLPDCLFVIDADHEHIAITEARNLGIPVISVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 387
TN +PDG++Y+IPGNDD+ +++ LY DA
Sbjct: 189 TNSNPDGVDYIIPGNDDAIRAVQLYLNAAADA 220
>gi|392957546|ref|ZP_10323069.1| 30S ribosomal protein S2 [Bacillus macauensis ZFHKF-1]
gi|391876509|gb|EIT85106.1| 30S ribosomal protein S2 [Bacillus macauensis ZFHKF-1]
Length = 241
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 158/222 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKMS YIF RN I+II+L+KT+ E+ + ++ + G +
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMSRYIFTERNGIYIIDLQKTVKKVEECYNVMREIAGNGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R+GM FI+QRWLGG LTNF TI+ I RLKE++ +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERSGMYFINQRWLGGTLTNFGTIRKRINRLKELERMQEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE ++ ++ +L + +GGIK+MN +PDA+FI+D + AV+EA KLNIPII +V
Sbjct: 128 VLPKKEVIILKKEMDRLEKFLGGIKDMNGLPDALFIVDPRKERIAVAEARKLNIPIIAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 396
DTN PD +++VIPGNDD+ +++ L T + DA ++A GE
Sbjct: 188 DTNCDPDEVDHVIPGNDDAIRAVKLLTGKMADAIIEANQGGE 229
>gi|91223473|ref|ZP_01258738.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01]
gi|451970866|ref|ZP_21924090.1| 30S ribosomal protein S2 [Vibrio alginolyticus E0666]
gi|91191559|gb|EAS77823.1| 30S ribosomal protein S2 [Vibrio alginolyticus 12G01]
gi|451933283|gb|EMD80953.1| 30S ribosomal protein S2 [Vibrio alginolyticus E0666]
Length = 242
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 115/240 (47%), Positives = 166/240 (69%), Gaps = 7/240 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ A+ + ++G KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELAKVGEKKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVRQSIKRLKELETQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVYAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN +PDG++YVIPGNDD+ +++ LY A V E R+K +A + E K +EA
Sbjct: 189 TNSNPDGVDYVIPGNDDAIRAVQLYLNAA------ASAVSEGRNKDVAAVAE-KDGFVEA 241
>gi|421526086|ref|ZP_15972695.1| uridylate kinase [Fusobacterium nucleatum ChDC F128]
gi|402257845|gb|EJU08318.1| uridylate kinase [Fusobacterium nucleatum ChDC F128]
Length = 239
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 160/222 (72%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM + I+S +I + +I EIV G+E++IVIGGGNI RGIS Q +DR T D
Sbjct: 15 GEALMGDQEFGISSDVITSYAKQIKEIVDLGVEVSIVIGGGNIFRGISGAAQGVDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT+INSLAL + + K G+ + V +AI + K E +I A ++LE+G+VVIF G
Sbjct: 75 HMGMLATVINSLALQNSIEKLGVPTRVQTAIEMPKVAEPFIKRRAQRHLEKGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT AALRA E++ ++++KATKVDGIY+ DP K A Y+ +T++EV++K L
Sbjct: 135 TGNPYFTTDTAAALRAIEMETDVVIKATKVDGIYDKDPVKYPDAKKYQTVTYNEVLAKDL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA S CR+ KLPI VF+ + G LK+V+ G+N GT V
Sbjct: 195 KVMDATAISLCRENKLPIIVFNSLDEGNLKKVVMGENIGTTV 236
>gi|385264776|ref|ZP_10042863.1| 30S ribosomal protein S2 [Bacillus sp. 5B6]
gi|385149272|gb|EIF13209.1| 30S ribosomal protein S2 [Bacillus sp. 5B6]
Length = 246
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 158/224 (70%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A + L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFTKNLA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
G +LFVGTK+QA+ + EAVR+GM +++QRWLGG LTNF+TI+ I+RLK+++
Sbjct: 62 AEGGKILFVGTKKQAQDSVKEEAVRSGMYYVNQRWLGGTLTNFETIQKRIKRLKDIEKMQ 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
NG+ L KKE + ++ +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 ENGTFEVLPKKEVVQLKKELERLEKFLGGIKDMKDLPDALFIIDPRKERIAVAEAHKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
PIIG+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK
Sbjct: 182 PIIGIVDTNCDPDEIDVVIPANDDAIRAVKLLTSKMADAILEAK 225
>gi|375085858|ref|ZP_09732480.1| 30S ribosomal protein S2 [Megamonas funiformis YIT 11815]
gi|374566343|gb|EHR37588.1| 30S ribosomal protein S2 [Megamonas funiformis YIT 11815]
Length = 242
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 158/218 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM+ YIF RN I+II+L+KT+ ++A ++ + ++
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVDEAYDFLRSVAEEGKSI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA+++GM ++++RWLGG++TNF TI+ SI RLKE++ +G+
Sbjct: 68 LFVGTKKQAQEAVKEEALKSGMFYVNERWLGGMMTNFATIRKSINRLKELEAMEEDGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L R+Q KL + +GGIK+M +P A+FI+D + AV+EA KLNIPI+ +V
Sbjct: 128 VLSKKEVLALKREQEKLEKSLGGIKDMEELPGALFIVDPRKERIAVAEAKKLNIPIVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN PD I+YVIPGNDD+ +++ L T + DA ++ +
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTSRMADAVIEGR 225
>gi|88807686|ref|ZP_01123198.1| uridylate kinase [Synechococcus sp. WH 7805]
gi|88788900|gb|EAR20055.1| uridylate kinase [Synechococcus sp. WH 7805]
Length = 235
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 110/233 (47%), Positives = 167/233 (71%), Gaps = 2/233 (0%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
Y+ A+LK GEALM Y I+ +I++ I +++ +V+ G +LAIV+GGGNI RG+
Sbjct: 3 YARALLKLS--GEALMGDQGYGIDPAIVQAIARDVAGVVASGTQLAIVVGGGNIFRGLKG 60
Query: 649 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 708
+DR+TADY+GMLAT++N++ L D L ++GI + V +AI +++ E YI AI++L
Sbjct: 61 SAAGMDRATADYVGMLATVMNAITLQDGLERAGIPTRVQTAIEMQEVAEPYIRRRAIRHL 120
Query: 709 EEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKK 768
E+G+VV+F G GNPFFTTDTTAALRAAEI A+++ KATKVDG+Y+ DP+K A+ Y
Sbjct: 121 EKGRVVVFGAGCGNPFFTTDTTAALRAAEIGADVVFKATKVDGVYDKDPHKHADAVRYDA 180
Query: 769 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+TF +V+S +L +MDSTA + C+D +PI VF++ ++G + R + G+ G+ +
Sbjct: 181 LTFQQVLSGELAVMDSTAIALCKDNNIPIVVFNLFEAGNIGRAVAGEPIGSRI 233
>gi|421556565|ref|ZP_16002480.1| UMP kinase [Neisseria meningitidis 80179]
gi|421564200|ref|ZP_16010008.1| UMP kinase [Neisseria meningitidis NM2795]
gi|421907804|ref|ZP_16337673.1| Uridylate kinase [Neisseria meningitidis alpha704]
gi|393291119|emb|CCI73680.1| Uridylate kinase [Neisseria meningitidis alpha704]
gi|402337238|gb|EJU72488.1| UMP kinase [Neisseria meningitidis 80179]
gi|402339000|gb|EJU74223.1| UMP kinase [Neisseria meningitidis NM2795]
Length = 239
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D++ IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDSFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDSSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE + K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 184 TITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVH 238
>gi|320352942|ref|YP_004194281.1| 30S ribosomal protein S2P [Desulfobulbus propionicus DSM 2032]
gi|320121444|gb|ADW16990.1| SSU ribosomal protein S2P [Desulfobulbus propionicus DSM 2032]
Length = 258
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 158/219 (72%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTR WNPKM YI+G RN I+I+NL+ T+ +++KA + + + G++
Sbjct: 8 QMLEAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDITMKLFKKAYGAMVEAVTNGGSV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQ + +I EA R GM +I+ RWLGG+LTNF+TIK S+ RLK+++ +G+I
Sbjct: 68 LFVCTKRQGQAIIKEEAERCGMYYINHRWLGGMLTNFQTIKHSVDRLKKIESMQADGTIN 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKE L ++++KL+R IGGIKNM +PD +F+ID AV EA+KL IP+I +
Sbjct: 128 RFPKKEVLQMEKERVKLDRNIGGIKNMRTLPDVLFVIDPKKEDIAVGEAVKLGIPVIALT 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN PDGINYVIPGNDD+ ++I L + + +A ++ K+
Sbjct: 188 DTNCDPDGINYVIPGNDDAIRAIKLISSMMAEAIMEGKS 226
>gi|261380650|ref|ZP_05985223.1| UMP kinase [Neisseria subflava NJ9703]
gi|261400757|ref|ZP_05986882.1| UMP kinase [Neisseria lactamica ATCC 23970]
gi|319639642|ref|ZP_07994389.1| uridylate kinase [Neisseria mucosa C102]
gi|269209355|gb|EEZ75810.1| UMP kinase [Neisseria lactamica ATCC 23970]
gi|284796632|gb|EFC51979.1| UMP kinase [Neisseria subflava NJ9703]
gi|317399213|gb|EFV79887.1| uridylate kinase [Neisseria mucosa C102]
Length = 239
Score = 235 bits (600), Expect = 8e-59, Method: Composition-based stats.
Identities = 127/235 (54%), Positives = 171/235 (72%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+EIV G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEIVRMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE + K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 184 TITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVH 238
>gi|254875948|ref|ZP_05248658.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841969|gb|EET20383.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 155/219 (70%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
++++ AGVHFGH+ FWNP+M YIFG + +HIINLEKT+ +++ A+ ++ + + G
Sbjct: 5 KEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGGK 64
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTKRQA+ +I EA R GMPF+ RWLGG+LTN+KT++ SI+RL +++ +G+
Sbjct: 65 VLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGTF 124
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L+KKE L R KL +V+GGIK M +PDAI +ID A+ EA KL I ++ +
Sbjct: 125 GSLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVSI 184
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
VDTN +P+GI+Y+IPGNDD+ KSI+ Y K DA +DA+
Sbjct: 185 VDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVIDAQ 223
>gi|123965821|ref|YP_001010902.1| uridylate kinase [Prochlorococcus marinus str. MIT 9515]
gi|171769723|sp|A2BVI4.1|PYRH_PROM5 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|123200187|gb|ABM71795.1| uridylate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 234
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 163/222 (73%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I+++I ++ ++++ ++LAIV+GGGNI RG+ +DR+TAD
Sbjct: 12 GEALMGDKPYGIDPAIVQSIAEDVEKVIANNVQLAIVVGGGNIFRGLKGSADGMDRATAD 71
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y+GMLAT++N+++L D L + G+ + V +AI +++ E YI A+++LE+G+VV+F GG
Sbjct: 72 YVGMLATVMNAISLQDGLERVGVETRVQTAIEMQEIAEPYIRRRAMRHLEKGRVVVFGGG 131
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDTTAALRAAEI AE+++KATKVDG+Y+ DPNK A Y +++ +V+S ++
Sbjct: 132 CGNPFFTTDTTAALRAAEINAEVVMKATKVDGVYDRDPNKFNEAKKYSSLSYQQVLSDEI 191
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+MDSTA + C+D +PI VF I K G + R + G++ G+L+
Sbjct: 192 AVMDSTAIALCKDNNIPIMVFDIFKKGNISRAVAGESIGSLI 233
>gi|15614990|ref|NP_243293.1| 30S ribosomal protein S2 [Bacillus halodurans C-125]
gi|20139933|sp|Q9KA63.1|RS2_BACHD RecName: Full=30S ribosomal protein S2
gi|10175047|dbj|BAB06146.1| 30S ribosomal protein S2 [Bacillus halodurans C-125]
Length = 244
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 157/219 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L G +
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVRELAADGGKV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R GM +I+QRWLGG LTNF+TI+ I RLK+++ +G+
Sbjct: 68 LFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRIDRLKKLEKMEEDGTFD 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE +L ++ +L + +GGIK+MN +PDA+F+ID + A++EA KLNIPI+ +V
Sbjct: 128 VLPKKEVILLKKEMERLEKFLGGIKDMNSLPDALFVIDPRKERIAIAEAHKLNIPIVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTN PD I+YVIPGNDD+ +++ L T + DA ++A +
Sbjct: 188 DTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEATS 226
>gi|90580971|ref|ZP_01236772.1| 30S ribosomal protein S2 [Photobacterium angustum S14]
gi|90437849|gb|EAS63039.1| 30S ribosomal protein S2 [Vibrio angustum S14]
Length = 242
Score = 235 bits (600), Expect = 9e-59, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 160/228 (70%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ A+ I ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPMFNAALAEIEKIAARKGKVL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A I A+ +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+ K
Sbjct: 69 FVGTKRAASESIKEAAISCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLEAQSTDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL + +GGIKNM +PDA+F+I A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKNMGGLPDAMFVIGADCEHIAIKEANNLGIPVFAVVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG+++VIPGNDD+ ++I LYT + A+TV E R++ +A
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAIQLYTGAV------AQTVKEARNQDIA 230
>gi|118580460|ref|YP_901710.1| 30S ribosomal protein S2 [Pelobacter propionicus DSM 2379]
gi|166225292|sp|A1AQN2.1|RS2_PELPD RecName: Full=30S ribosomal protein S2
gi|118503170|gb|ABK99652.1| SSU ribosomal protein S2P [Pelobacter propionicus DSM 2379]
Length = 257
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 159/225 (70%), Gaps = 1/225 (0%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQ 226
M S++ E +++AGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ ++ A ++ +
Sbjct: 1 MSSISMKE-LLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKE 59
Query: 227 LGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDL 286
+ T+LFVGTK+QA+ + EA R GM +++QRWLGG+LTNF T+K SI RLK +D
Sbjct: 60 SVLNGDTVLFVGTKKQAQDSVCEEAQRCGMHYVNQRWLGGMLTNFTTVKQSIDRLKRIDA 119
Query: 287 FITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKL 346
+G+I KKEAL F ++++KL +++GGIK MN +P +F+ID + A+ EA KL
Sbjct: 120 MFEDGTIEAYPKKEALQFEKERVKLQKILGGIKGMNRLPGLMFVIDPKNEEIAIQEAKKL 179
Query: 347 NIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
IP++ +VDTN PD I+YVIPGNDD+ ++I L + + DA ++
Sbjct: 180 GIPVVAIVDTNCDPDPIDYVIPGNDDAIRAIRLLSSKMADAVIEG 224
>gi|392402015|ref|YP_006438627.1| uridylate kinase [Turneriella parva DSM 21527]
gi|390609969|gb|AFM11121.1| uridylate kinase [Turneriella parva DSM 21527]
Length = 258
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 158/222 (71%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GE L D + IN +I+ + EI +I G+ELA+VIGGGNI RG+ +DR+ D
Sbjct: 27 GEVLAGEDKHGINVKVIRALAEEIRDIHRDGVELALVIGGGNIFRGVKAASDGMDRAIGD 86
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT+IN LAL D L K G+ + + +AI I+ E +I AI++LE+ ++VI +GG
Sbjct: 87 YMGMMATVINGLALQDFLEKEGLTTRLQTAIEIKSVAEPFIRRKAIRHLEKKRIVILSGG 146
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDTTAALRA E+ A++I KATKVDG+Y+SDP K +A Y++++F + + K+L
Sbjct: 147 TGNPYFTTDTTAALRAVELDADVIFKATKVDGVYDSDPVKNPAAKRYRRLSFHDALVKQL 206
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MDSTAFS C D K+PI+VF + K G LK+ ++GK GTL+
Sbjct: 207 KVMDSTAFSLCLDNKMPIQVFDMSKEGNLKKAVQGKPIGTLI 248
>gi|288576113|ref|ZP_06394177.1| stringent starvation protein A [Neisseria mucosa ATCC 25996]
gi|288566265|gb|EFC87825.1| stringent starvation protein A [Neisseria mucosa ATCC 25996]
Length = 177
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 145/178 (81%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D+FNKP+++ MNPY QVP+LVERDLIL+ESNIINEYIDERFP+PQLM DP
Sbjct: 1 MDFEIKDVDIFNKPEDLAVMNPYNQVPVLVERDLILHESNIINEYIDERFPHPQLMPGDP 60
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F +++LEN N T+ K +ARE I + L LAP F K+KY+
Sbjct: 61 VMRGRGRLVLFRMEKELFNFVHVLENP-NATN-KEQTKAREAIGNGLTMLAPAFAKSKYI 118
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSM+DV ++PLLWRLD+Y I L KSA+PL+KYAERIF R +++E+LTPAEK M+
Sbjct: 119 LGEDFSMIDVALSPLLWRLDHYDIKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMR 176
>gi|71275610|ref|ZP_00651895.1| Aspartate/glutamate/uridylate kinase [Xylella fastidiosa Dixon]
gi|170729579|ref|YP_001775012.1| uridylate kinase [Xylella fastidiosa M12]
gi|71163501|gb|EAO13218.1| Aspartate/glutamate/uridylate kinase [Xylella fastidiosa Dixon]
gi|71730727|gb|EAO32801.1| Aspartate/glutamate/uridylate kinase [Xylella fastidiosa Ann-1]
gi|167964372|gb|ACA11382.1| uridylate kinase [Xylella fastidiosa M12]
Length = 243
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 152/224 (67%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I + E+ E + G ELA+VIGGGNI RG + +DR T D
Sbjct: 15 GEALMGSADYGIDPKVINRLAGEVIEAQNAGAELALVIGGGNIFRGAGLAAKGMDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLATIIN+LA+ D L K G VMSAI I E +I AI++LE+ ++ IFA G
Sbjct: 75 HMGMLATIINALAMQDALEKLGTKVRVMSAIKINNVCEDFIRRRAIRHLEKSRITIFAAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ AALRA EI A+++LKATKVDGIYN DP K A+ Y +++DEVIS+ L
Sbjct: 135 TGNPFFTTDSGAALRAIEIGADLLLKATKVDGIYNKDPQKHCDAVKYSTLSYDEVISQNL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 823
E+MD+ AF+ RD LP+R+F I + G L R++ G+ GTLV E
Sbjct: 195 EVMDTAAFALARDSNLPLRIFDIEQPGVLLRILHGEEIGTLVKE 238
>gi|311030100|ref|ZP_07708190.1| 30S ribosomal protein S2 [Bacillus sp. m3-13]
Length = 235
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 114/235 (48%), Positives = 165/235 (70%), Gaps = 1/235 (0%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLG 228
S+ +++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ +L
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 229 FSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFI 288
+ GT+LFVGTK+QA+ + EA R+GM +++QRWLGG LTNF+TI+ I RLK ++
Sbjct: 62 GNGGTVLFVGTKKQAQDSVKEEAERSGMYYVNQRWLGGTLTNFETIQKRISRLKAIEKMQ 121
Query: 289 TNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNI 348
+G+ L KKE ++ ++ +L + +GGIK+M +PDA+FIID + AV+EA KLNI
Sbjct: 122 EDGTFEVLPKKEVVMLKKELDRLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEARKLNI 181
Query: 349 PIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
PI+G+VDTN PD I+ VIP NDD+ +++ L T + DA L+AK GE + T A
Sbjct: 182 PIVGIVDTNCDPDEIDVVIPANDDAIRAVKLLTGKMADAILEAKQ-GEETATTTA 235
>gi|94263229|ref|ZP_01287046.1| Ribosomal protein S2 [delta proteobacterium MLMS-1]
gi|93456447|gb|EAT06567.1| Ribosomal protein S2 [delta proteobacterium MLMS-1]
Length = 270
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 151/218 (69%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG+HFGHQTR WNPKM YIFG RN I+IINL+KTL ++++A Y+ + G++
Sbjct: 13 EMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFQRATEYVARKAAKGGSI 72
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQA+ ++ EA R GM F++ RWLGG+LTN +TIK S+ RLK +GSI
Sbjct: 73 LFVGTKRQAQDIVREEAERCGMYFVNHRWLGGMLTNHQTIKKSVDRLKSYTSMQEDGSIH 132
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ KKE ++ ++ +KL R +GGIK M +P AIF++D AV+EA +L +P++ +
Sbjct: 133 RYKKKEIMMIQKETLKLERNLGGIKEMKSLPAAIFVVDPKREDIAVTEANRLGVPVVAIA 192
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN P GI+Y+IPGNDD+ KSI L + DA L K
Sbjct: 193 DTNCDPTGIDYLIPGNDDAIKSIRLVCSKLADAILAGK 230
>gi|385785678|ref|YP_005816787.1| 30S ribosomal protein S2 [Erwinia sp. Ejp617]
gi|310764950|gb|ADP09900.1| 30S ribosomal protein S2 [Erwinia sp. Ejp617]
Length = 236
Score = 235 bits (600), Expect = 9e-59, Method: Composition-based stats.
Identities = 109/228 (47%), Positives = 161/228 (70%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 4 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 63
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 64 FVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 123
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 124 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 183
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG++++IPGNDD+ ++++LY + A TV E RS+ LA
Sbjct: 184 TNSDPDGVDFIIPGNDDAIRAVSLYLTAV------ATTVREGRSQDLA 225
>gi|292489228|ref|YP_003532115.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430]
gi|292898539|ref|YP_003537908.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946]
gi|428786189|ref|ZP_19003671.1| 30S ribosomal protein S2 [Erwinia amylovora ACW56400]
gi|291198387|emb|CBJ45494.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC 49946]
gi|291554662|emb|CBA22357.1| 30S ribosomal protein S2 [Erwinia amylovora CFBP1430]
gi|312173389|emb|CBX81643.1| 30S ribosomal protein S2 [Erwinia amylovora ATCC BAA-2158]
gi|426275317|gb|EKV53053.1| 30S ribosomal protein S2 [Erwinia amylovora ACW56400]
Length = 241
Score = 235 bits (600), Expect = 9e-59, Method: Composition-based stats.
Identities = 109/228 (47%), Positives = 161/228 (70%), Gaps = 6/228 (2%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
++QAGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + A+ F++ RWLGG+LTN+KT++ SI+RLK++++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEHALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEAL+ R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRARELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 403
TN PDG++++IPGNDD+ ++++LY + A TV E RS+ LA
Sbjct: 189 TNSDPDGVDFIIPGNDDAIRAVSLYLTAV------AATVREGRSQDLA 230
>gi|421560067|ref|ZP_16005932.1| UMP kinase [Neisseria meningitidis 92045]
gi|402334152|gb|EJU69446.1| UMP kinase [Neisseria meningitidis 92045]
Length = 239
Score = 235 bits (600), Expect = 9e-59, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 171/235 (72%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDSSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE + K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 184 TITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKGGSLKRVVTGENEGTLVH 238
>gi|329118227|ref|ZP_08246937.1| UMP kinase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465648|gb|EGF11923.1| UMP kinase [Neisseria bacilliformis ATCC BAA-1200]
Length = 239
Score = 235 bits (600), Expect = 9e-59, Method: Composition-based stats.
Identities = 123/235 (52%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GEALM D + IN I I+ ++ EI G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GEALMGADPFGINRDTIMRIVGQVKEIADMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
++ ++DR+TADYMGM+AT++N+LAL D G+ + V SA+S+++ E+Y AI+Y
Sbjct: 64 SQAASMDRATADYMGMMATVMNALALKDAFESLGVKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
L+EGKVVIFAGG GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K +A +
Sbjct: 124 LKEGKVVIFAGGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPAATRFD 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR+++L I VF I + GALKRVI G+NEGTLV+
Sbjct: 184 TITFDEALNKNLKVMDATAFALCRERRLNIVVFGIAQEGALKRVIAGENEGTLVH 238
>gi|172057860|ref|YP_001814320.1| 30S ribosomal protein S2 [Exiguobacterium sibiricum 255-15]
gi|229470515|sp|B1YI76.1|RS2_EXIS2 RecName: Full=30S ribosomal protein S2
gi|171990381|gb|ACB61303.1| ribosomal protein S2 [Exiguobacterium sibiricum 255-15]
Length = 244
Score = 235 bits (600), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 155/218 (71%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM+ YIF RN I+II+L+KT+ ++A +I ++ G +
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVDEAYNFIREVASEGGNV 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA+RAG FI++RWLGG LTNF TIK I RLK+++ NG+
Sbjct: 68 LFVGTKKQAQDTVKEEAIRAGQYFINERWLGGTLTNFSTIKKRINRLKQLEKMEENGTFE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
L KKE ++ ++ +L + +GGIK+M +PDA+FI+D + A++EA KLNIPI+ +V
Sbjct: 128 VLPKKEVIILKKEMTRLEKFLGGIKDMPGVPDALFIVDPRKERIAIAEAHKLNIPIVAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN PD I+YVIP NDD+ +++ L T + DA L+ K
Sbjct: 188 DTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEVK 225
>gi|242240397|ref|YP_002988578.1| 30S ribosomal protein S2 [Dickeya dadantii Ech703]
gi|242132454|gb|ACS86756.1| ribosomal protein S2 [Dickeya dadantii Ech703]
Length = 241
Score = 235 bits (599), Expect = 1e-58, Method: Composition-based stats.
Identities = 113/240 (47%), Positives = 165/240 (68%), Gaps = 8/240 (3%)
Query: 176 IMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 235
+++AGVHFGHQTRFWNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRFWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASRKGKIL 68
Query: 236 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 295
FVGTKR A + AV F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKEAAVNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQDGTFDK 128
Query: 296 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 355
L+KKEALL R+ KL +GGIK+M +PDA+F++D + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFAIVD 188
Query: 356 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 415
TN PDG++Y+IPGNDD+ +++ LY + A V E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDYIIPGNDDAIRAVTLYLSAV------ATAVREGRSQDLAE--QAEESFVEA 240
>gi|261401692|ref|ZP_05987817.1| stringent starvation protein A [Neisseria lactamica ATCC 23970]
gi|313669170|ref|YP_004049454.1| regulator of pilE expression [Neisseria lactamica 020-06]
gi|421863031|ref|ZP_16294733.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|269208220|gb|EEZ74675.1| stringent starvation protein A [Neisseria lactamica ATCC 23970]
gi|309379562|emb|CBX21928.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313006632|emb|CBN88098.1| putative regulator of pilE expression [Neisseria lactamica 020-06]
Length = 201
Score = 235 bits (599), Expect = 1e-58, Method: Composition-based stats.
Identities = 108/178 (60%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
MDFEI+D+D++NKP+++ MNPY QVP+LVERDL+L+ESNIINEYIDERFP+PQLM DP
Sbjct: 25 MDFEIKDVDIYNKPEDLAVMNPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+MR R RL+L EKE+F H+ +LEN + K +ARE I + L LAP F K+KY+
Sbjct: 85 VMRGRGRLVLYRMEKELFNHVQVLENP--AATNKEQAKAREAIGNGLTMLAPSFSKSKYI 142
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQ 178
LG++FSM+DV +APLLWRLD+Y + L KSA+PL+KYAERIF R +++++LTPAEK M+
Sbjct: 143 LGEDFSMIDVALAPLLWRLDHYDVKLGKSAAPLLKYAERIFQREAFIDALTPAEKAMR 200
>gi|59802282|ref|YP_208994.1| uridylate kinase [Neisseria gonorrhoeae FA 1090]
gi|194099759|ref|YP_002002894.1| uridylate kinase [Neisseria gonorrhoeae NCCP11945]
gi|240013109|ref|ZP_04720022.1| uridylate kinase [Neisseria gonorrhoeae DGI18]
gi|240120179|ref|ZP_04733141.1| uridylate kinase [Neisseria gonorrhoeae PID24-1]
gi|254492700|ref|ZP_05105871.1| uridylate kinase [Neisseria gonorrhoeae 1291]
gi|268595751|ref|ZP_06129918.1| uridylate kinase [Neisseria gonorrhoeae 35/02]
gi|268597938|ref|ZP_06132105.1| uridylate kinase [Neisseria gonorrhoeae FA19]
gi|268600189|ref|ZP_06134356.1| uridylate kinase [Neisseria gonorrhoeae MS11]
gi|268600286|ref|ZP_06134453.1| uridylate kinase [Neisseria gonorrhoeae PID18]
gi|268602518|ref|ZP_06136685.1| uridylate kinase [Neisseria gonorrhoeae PID1]
gi|268681067|ref|ZP_06147929.1| uridylate kinase [Neisseria gonorrhoeae PID332]
gi|268685255|ref|ZP_06152117.1| uridylate kinase [Neisseria gonorrhoeae SK-92-679]
gi|268685547|ref|ZP_06152409.1| uridylate kinase [Neisseria gonorrhoeae SK-93-1035]
gi|291044917|ref|ZP_06570626.1| uridylate kinase [Neisseria gonorrhoeae DGI2]
gi|340361168|ref|ZP_08683605.1| UMP kinase [Neisseria macacae ATCC 33926]
gi|75355367|sp|Q5F5F5.1|PYRH_NEIG1 RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
monophosphate kinase; Short=UMP kinase; Short=UMPK
gi|59719177|gb|AAW90582.1| putative uridylate kinase [Neisseria gonorrhoeae FA 1090]
gi|193935049|gb|ACF30873.1| uridylate kinase [Neisseria gonorrhoeae NCCP11945]
gi|226511740|gb|EEH61085.1| uridylate kinase [Neisseria gonorrhoeae 1291]
gi|268549140|gb|EEZ44558.1| uridylate kinase [Neisseria gonorrhoeae 35/02]
gi|268551726|gb|EEZ46745.1| uridylate kinase [Neisseria gonorrhoeae FA19]
gi|268584320|gb|EEZ48996.1| uridylate kinase [Neisseria gonorrhoeae MS11]
gi|268584417|gb|EEZ49093.1| uridylate kinase [Neisseria gonorrhoeae PID18]
gi|268586649|gb|EEZ51325.1| uridylate kinase [Neisseria gonorrhoeae PID1]
gi|268621351|gb|EEZ53751.1| uridylate kinase [Neisseria gonorrhoeae PID332]
gi|268625539|gb|EEZ57939.1| uridylate kinase [Neisseria gonorrhoeae SK-92-679]
gi|268625831|gb|EEZ58231.1| uridylate kinase [Neisseria gonorrhoeae SK-93-1035]
gi|291011811|gb|EFE03807.1| uridylate kinase [Neisseria gonorrhoeae DGI2]
gi|339889003|gb|EGQ78416.1| UMP kinase [Neisseria macacae ATCC 33926]
Length = 239
Score = 235 bits (599), Expect = 1e-58, Method: Composition-based stats.
Identities = 127/235 (54%), Positives = 172/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+EIV G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEIVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE ++K L++MD+TAF+ CR++KL I VF I K G+LKRVI G++EGTLV+
Sbjct: 184 TITFDEALNKNLKVMDATAFALCRERKLNIVVFGIAKQGSLKRVITGEDEGTLVH 238
>gi|350572349|ref|ZP_08940650.1| UMP kinase [Neisseria wadsworthii 9715]
gi|349790276|gb|EGZ44193.1| UMP kinase [Neisseria wadsworthii 9715]
Length = 239
Score = 235 bits (599), Expect = 1e-58, Method: Composition-based stats.
Identities = 127/235 (54%), Positives = 173/235 (73%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GEALM D + IN I I+S+I EI G+++ +V+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GEALMGNDPFGINRDTIMQIVSQIKEITDMGVQVGVVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D G+ + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFESLGVKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +I++KAT VDG+YN+DP K SA+ Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDIMMKATNVDGVYNADPKKDPSAVRYQ 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
+TFDE + K L++MD+TAF+ CR++KL I VF I K GALKRVI G++EGTLV+
Sbjct: 184 TLTFDEALIKNLKVMDATAFALCRERKLNIVVFGISKEGALKRVILGEDEGTLVH 238
>gi|337288565|ref|YP_004628037.1| 30S ribosomal protein S2 [Thermodesulfobacterium sp. OPB45]
gi|334902303|gb|AEH23109.1| ribosomal protein S2 [Thermodesulfobacterium geofontis OPF15]
Length = 281
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 154/217 (70%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR WNPKM +IFG RN IHII+L++TL+ +E A ++ L G +
Sbjct: 8 QLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQQTLHYFEIAYEFVVNLVAQGGKI 67
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTK+QA+ + EA R GM ++ RWLGG LTNF+TI+ S+++LK+++ + +G+I
Sbjct: 68 LFVGTKKQAQETVKEEAERCGMYYVVNRWLGGTLTNFRTIRQSVEKLKKLETWFEDGTIE 127
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+ +KKE L R + KL + + GIKNM +P A++I+D + + AV EA KL IPII +V
Sbjct: 128 RFTKKERLRLERLKNKLEKNLAGIKNMETLPQALYIVDPVHEEIAVKEARKLGIPIIAIV 187
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
DTN PD I+Y+IPGNDD+ ++I L T I DA L+
Sbjct: 188 DTNCDPDLIDYIIPGNDDAIRAIKLITSKIADACLEG 224
>gi|308068686|ref|YP_003870291.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681]
gi|310641581|ref|YP_003946339.1| 30S ribosomal protein S2 [Paenibacillus polymyxa SC2]
gi|374323497|ref|YP_005076626.1| 30S ribosomal protein S2 [Paenibacillus terrae HPL-003]
gi|386040608|ref|YP_005959562.1| 30S ribosomal protein S2 [Paenibacillus polymyxa M1]
gi|305857965|gb|ADM69753.1| 30S ribosomal protein S2 [Paenibacillus polymyxa E681]
gi|309246530|gb|ADO56097.1| 30S ribosomal protein S2 [Paenibacillus polymyxa SC2]
gi|343096646|emb|CCC84855.1| 30S ribosomal protein S2 [Paenibacillus polymyxa M1]
gi|357202506|gb|AET60403.1| 30S ribosomal protein S2 [Paenibacillus terrae HPL-003]
Length = 232
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 157/218 (72%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGT 233
+++++AGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A ++ + GT
Sbjct: 7 KQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSIAAENGT 66
Query: 234 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 293
+LFVGTK+QA+ + EA RAG +I+QRWLGG LTNF+TI+ I RLK+++ + +G+
Sbjct: 67 ILFVGTKKQAQDSVKEEAARAGQFYINQRWLGGTLTNFQTIQKRIDRLKQLEAWEEDGTF 126
Query: 294 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 353
L KKE ++ +++ +L + +GGIKNM +P A+FIID + AV+EA KL IPI+G+
Sbjct: 127 AVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIPIVGI 186
Query: 354 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 391
VDTN PD I+YVIPGNDD+ +++ L T + DA ++A
Sbjct: 187 VDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVMEA 224
>gi|241759097|ref|ZP_04757208.1| UMP kinase [Neisseria flavescens SK114]
gi|421567938|ref|ZP_16013669.1| UMP kinase [Neisseria meningitidis NM3001]
gi|241320699|gb|EER56952.1| UMP kinase [Neisseria flavescens SK114]
gi|402342883|gb|EJU78039.1| UMP kinase [Neisseria meningitidis NM3001]
Length = 239
Score = 235 bits (599), Expect = 1e-58, Method: Composition-based stats.
Identities = 126/235 (53%), Positives = 171/235 (72%), Gaps = 2/235 (0%)
Query: 588 EYSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS 647
+Y +LK GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S
Sbjct: 6 KYKRVLLKLS--GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVS 63
Query: 648 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 707
+ ++DR+TADYMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+Y
Sbjct: 64 AQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQY 123
Query: 708 LEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
LEEGKVVIFA G GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+
Sbjct: 124 LEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYE 183
Query: 768 KITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
ITFDE + K L++MD+TAF+ CR++KL I VF I K G+LKRV+ G+NEGTLV+
Sbjct: 184 TITFDEALLKNLKVMDATAFALCRERKLNIVVFGIAKEGSLKRVVTGENEGTLVH 238
>gi|373499226|ref|ZP_09589717.1| uridylate kinase [Fusobacterium sp. 12_1B]
gi|371959297|gb|EHO76988.1| uridylate kinase [Fusobacterium sp. 12_1B]
Length = 239
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 158/222 (71%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM + I+S +I + +I EIV G+E++IVIGGGNI RGIS Q +DR T D
Sbjct: 15 GEALMGDQEFGISSDVINSYAKQIKEIVDLGVEVSIVIGGGNIFRGISGATQGVDRVTGD 74
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT+INSLAL + + K G+ + V +AI + K E +I A ++LE+G+VVIF G
Sbjct: 75 HMGMLATVINSLALQNAIEKLGVPTRVQTAIEMPKIAEPFIKRKAQRHLEKGRVVIFGAG 134
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNP+FTTDT AALRA E+ E +LKATKVDGIY+ DP K A+ Y +T+ EV++K L
Sbjct: 135 TGNPYFTTDTAAALRAIEMNTEAVLKATKVDGIYDKDPVKYADAVKYNVVTYTEVLNKDL 194
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++MD+TA S CR+ KLPI VF+ ++ G +K+VI G+ GT+V
Sbjct: 195 KVMDATAISLCRENKLPIVVFNSLEEGNIKKVIMGEKIGTVV 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.138 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,309,005,501
Number of Sequences: 23463169
Number of extensions: 595187659
Number of successful extensions: 1978851
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 17257
Number of HSP's successfully gapped in prelim test: 6850
Number of HSP's that attempted gapping in prelim test: 1941914
Number of HSP's gapped (non-prelim): 27591
length of query: 1012
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 859
effective length of database: 8,769,330,510
effective search space: 7532854908090
effective search space used: 7532854908090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)