BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3752
(1012 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SZQ1|RS2_JANMA 30S ribosomal protein S2 OS=Janthinobacterium sp. (strain
Marseille) GN=rpsB PE=3 SV=2
Length = 248
Score = 347 bits (889), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 193/219 (88%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRN+IHI+NLEKT+ MY++A++YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSSNRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKEM+ I +GS++
Sbjct: 67 LFVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDGSVQ 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|A4G4S1|RS2_HERAR 30S ribosomal protein S2 OS=Herminiimonas arsenicoxydans GN=rpsB
PE=3 SV=1
Length = 248
Score = 346 bits (888), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 192/219 (87%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRN+IHI+NLEKTL MY++A++YI QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLSSNRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKE++ + +GS+
Sbjct: 67 LFVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALVEDGSME 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVV
Sbjct: 127 KLSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G+ Y+IPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|B2UB06|RS2_RALPJ 30S ribosomal protein S2 OS=Ralstonia pickettii (strain 12J)
GN=rpsB PE=3 SV=1
Length = 247
Score = 323 bits (829), Expect = 3e-87, Method: Composition-based stats.
Identities = 145/218 (66%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY+ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMPF+D RWLGG+LTNFKT+KTSI+RLK+M++ G+
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKEAGATE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q0KA16|RS2_CUPNH 30S ribosomal protein S2 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=rpsB PE=3 SV=1
Length = 248
Score = 320 bits (820), Expect = 4e-86, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 187/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +P+IGVV
Sbjct: 127 TMSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q8XZJ1|RS2_RALSO 30S ribosomal protein S2 OS=Ralstonia solanacearum (strain GMI1000)
GN=rpsB PE=3 SV=1
Length = 247
Score = 318 bits (816), Expect = 1e-85, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 SMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q2L162|RS2_BORA1 30S ribosomal protein S2 OS=Bordetella avium (strain 197N) GN=rpsB
PE=3 SV=1
Length = 249
Score = 318 bits (815), Expect = 1e-85, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+K+SI+RLKEM++ + +GS+
Sbjct: 66 LFVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGSVE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+L+KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RLTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDG++Y+IPGNDDSA++IALY KGI DA L+ +
Sbjct: 186 DTNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEGR 223
>sp|B3R2B7|RS2_CUPTR 30S ribosomal protein S2 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=rpsB PE=3 SV=1
Length = 247
Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK M +PDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q470D7|RS2_CUPPJ 30S ribosomal protein S2 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=rpsB PE=3 SV=1
Length = 247
Score = 318 bits (814), Expect = 2e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 186/218 (85%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
+FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 67 MFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ +KL + IGGIK M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q1LNF8|RS2_RALME 30S ribosomal protein S2 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=rpsB PE=3 SV=1
Length = 247
Score = 315 bits (808), Expect = 8e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+
Sbjct: 7 EMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 67 LFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVV
Sbjct: 127 TMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q63T12|RS2_BURPS 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
K96243) GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NAU8|RS2_BURP6 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain 668)
GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q3JR28|RS2_BURP1 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1710b) GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NWN1|RS2_BURP0 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1106a) GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A1V569|RS2_BURMS 30S ribosomal protein S2 OS=Burkholderia mallei (strain SAVP1)
GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q62JC4|RS2_BURMA 30S ribosomal protein S2 OS=Burkholderia mallei (strain ATCC 23344)
GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A2SB72|RS2_BURM9 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10229)
GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3MKU3|RS2_BURM7 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10247)
GN=rpsB PE=3 SV=1
Length = 246
Score = 315 bits (808), Expect = 9e-85, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 185/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|B2JIC6|RS2_BURP8 30S ribosomal protein S2 OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=rpsB PE=3 SV=1
Length = 250
Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA A RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDD++K++ALYT+G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGR 224
>sp|Q13XB6|RS2_BURXL 30S ribosomal protein S2 OS=Burkholderia xenovorans (strain LB400)
GN=rpsB PE=3 SV=1
Length = 250
Score = 314 bits (804), Expect = 3e-84, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|Q2YBA7|RS2_NITMU 30S ribosomal protein S2 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsB PE=3 SV=2
Length = 248
Score = 314 bits (804), Expect = 3e-84, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 184/218 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFGHRNKIHIINLEKTL MY++A+ Y+ QL +KGT+
Sbjct: 7 QMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANKGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G PF+DQRWLGG+LTNFKTIK S++RL +M+ + +G++
Sbjct: 67 LFVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDGTLD 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R+ KLNR +GGIK+M +PDA+F+IDVGY KGA++EA KL IPI+G+V
Sbjct: 127 KLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIVGIV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 187 DSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>sp|B2T5J4|RS2_BURPP 30S ribosomal protein S2 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rpsB PE=3 SV=1
Length = 250
Score = 314 bits (804), Expect = 3e-84, Method: Composition-based stats.
Identities = 142/218 (65%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
++SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VV
Sbjct: 127 RMSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 187 DTNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|Q0BE15|RS2_BURCM 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 5e-84, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1YS74|RS2_BURA4 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain MC40-6)
GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 5e-84, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A1WHU2|RS2_VEREI 30S ribosomal protein S2 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rpsB PE=3 SV=1
Length = 250
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 184/219 (84%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A +++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA+RAGMPF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L F R+ KL + IGGI++M+ +P+AIF+IDVG+HK AV+EA KL I +IGVV
Sbjct: 126 SLSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGIALIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 186 DTNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|B4ECN1|RS2_BURCJ 30S ribosomal protein S2 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rpsB PE=3 SV=1
Length = 246
Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q39F43|RS2_BURS3 30S ribosomal protein S2 OS=Burkholderia sp. (strain 383) GN=rpsB
PE=3 SV=1
Length = 246
Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A0K8E3|RS2_BURCH 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain
HI2424) GN=rpsB PE=3 SV=1
Length = 246
Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1JUF0|RS2_BURCC 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain MC0-3)
GN=rpsB PE=3 SV=1
Length = 246
Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q1BHI2|RS2_BURCA 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain AU
1054) GN=rpsB PE=3 SV=1
Length = 246
Score = 311 bits (798), Expect = 1e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q2SWZ8|RS2_BURTA 30S ribosomal protein S2 OS=Burkholderia thailandensis (strain E264
/ ATCC 700388 / DSM 13276 / CIP 106301) GN=rpsB PE=3
SV=2
Length = 246
Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 183/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G +
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A4JF75|RS2_BURVG 30S ribosomal protein S2 OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=rpsB PE=3 SV=1
Length = 246
Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 182/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G
Sbjct: 67 LFVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGETE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VV
Sbjct: 127 KMSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 187 DTNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A1TN69|RS2_ACIAC 30S ribosomal protein S2 OS=Acidovorax citrulli (strain AAC00-1)
GN=rpsB PE=3 SV=1
Length = 250
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L F R+ KL + IGGI++MN +PDAIFIIDVG+HK AV+EA KL IP+IGVV
Sbjct: 126 SMSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|Q47F92|RS2_DECAR 30S ribosomal protein S2 OS=Dechloromonas aromatica (strain RCB)
GN=rpsB PE=3 SV=1
Length = 248
Score = 310 bits (794), Expect = 3e-83, Method: Composition-based stats.
Identities = 140/219 (63%), Positives = 182/219 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFG RNKIHI+NLEKTL Y +A+ ++ +L S+GT+
Sbjct: 7 EMLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLASSRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA+RAG PF+DQRWLGG+LTNFKT+KTSI+RLK+M++ + G +
Sbjct: 67 LFVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAVEAGELE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K+ KKEAL F R+ KL + IGGIK M +PDAIF+IDVGYHK A++EA KL IP+IGVV
Sbjct: 127 KMPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSPDG+ YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEGRS 225
>sp|Q12A31|RS2_POLSJ 30S ribosomal protein S2 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rpsB PE=3 SV=1
Length = 250
Score = 309 bits (792), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 140/223 (62%), Positives = 182/223 (81%), Gaps = 1/223 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ YIFGHRN+IHIINLEK+L M++ A+++ QL +
Sbjct: 3 TSMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM
Sbjct: 63 RGTILMVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + +SKKE L F R+ KL + IGGI++MN +PDAIF+IDVG+HK A+ EA KL IP+
Sbjct: 123 G-LDSISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
IGVVD+NHSP GI+YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 182 IGVVDSNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224
>sp|Q5NZH5|RS2_AROAE 30S ribosomal protein S2 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsB PE=3 SV=1
Length = 251
Score = 308 bits (788), Expect = 2e-82, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 184/219 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ Y+ +L ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +++ EA RAGMPF+D+RWLGG+LTNFKT+K SI+RLKEM+ + +GSI
Sbjct: 67 LLVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSKKEAL+ R+ KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL IPI+ VV
Sbjct: 127 RLSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGIPIVAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|C5CKS0|RS2_VARPS 30S ribosomal protein S2 OS=Variovorax paradoxus (strain S110)
GN=rpsB PE=3 SV=1
Length = 250
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 181/222 (81%), Gaps = 1/222 (0%)
Query: 171 TPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFS 230
T ++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL +
Sbjct: 3 TTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTAN 62
Query: 231 KGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITN 290
+GT+L VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M
Sbjct: 63 RGTILMVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEA 122
Query: 291 GSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPI 350
G + LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+
Sbjct: 123 G-LDSLSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPL 181
Query: 351 IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
IGVVD+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 182 IGVVDSNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>sp|Q21WY9|RS2_RHOFD 30S ribosomal protein S2 OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=rpsB PE=3 SV=1
Length = 250
Score = 307 bits (786), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 135/219 (61%), Positives = 182/219 (83%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ Q+ +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVSARRGTV 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 67 LMVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
LSKKE L+F R+ KL R IGGI++M ++PDAIF+IDVG+HK A++EA KL IP+I VV
Sbjct: 126 SLSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGIPLIAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+Y+IPGNDDS+K++ LY +GI DA ++ ++
Sbjct: 186 DTNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEGRS 224
>sp|Q7VYD0|RS2_BORPE 30S ribosomal protein S2 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=rpsB PE=3 SV=1
Length = 249
Score = 306 bits (783), Expect = 7e-82, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 66 LFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 186 DTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WA60|RS2_BORPA 30S ribosomal protein S2 OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rpsB PE=3 SV=1
Length = 249
Score = 306 bits (783), Expect = 7e-82, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 66 LFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 186 DTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WJ94|RS2_BORBR 30S ribosomal protein S2 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rpsB PE=3 SV=1
Length = 249
Score = 306 bits (783), Expect = 7e-82, Method: Composition-based stats.
Identities = 136/218 (62%), Positives = 181/218 (83%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +
Sbjct: 6 EMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNI 65
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G
Sbjct: 66 LFVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VV
Sbjct: 126 RMTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 186 DTNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|A1K6S1|RS2_AZOSB 30S ribosomal protein S2 OS=Azoarcus sp. (strain BH72) GN=rpsB PE=3
SV=1
Length = 251
Score = 306 bits (783), Expect = 7e-82, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 184/219 (84%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ ++ +L ++GT+
Sbjct: 7 QMLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFV TKRQAR ++A EA RAGMP++D+RWLGG+LTNFKT+K SI+RLKE++ I +GSI
Sbjct: 67 LFVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMIEDGSIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+LSK+EAL R+ KL + IGGIK+M +PDAIFIIDVGYHK AV+EA KL IP++GVV
Sbjct: 127 RLSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+GI+Y+IPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 187 DTNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|A4SYV1|RS2_POLSQ 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rpsB PE=3 SV=1
Length = 249
Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 178/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+
Sbjct: 7 QMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVASNRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M + G
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAKEAGDWE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLSKKEAL R KL + +GGI+++N +PDAIF++DVGYHK A++EA KL IP+I VV
Sbjct: 127 KLSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+K++ LY +GI DA L+ K
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKA 225
>sp|Q1H139|RS2_METFK 30S ribosomal protein S2 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rpsB PE=3 SV=1
Length = 249
Score = 305 bits (781), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 175/218 (80%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL ++E A++Y+ QL +KG +
Sbjct: 7 QMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSANKGRI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR +I EA RAG P+++ RWLGG+LTNFKT+K SI+RL E + + +G I
Sbjct: 67 LFVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALLQDGGIE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
K KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GAV+EA KL IP+IGVV
Sbjct: 127 KFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGIPVIGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTN+SP+G+ YVIPGNDDS+++I LY +GI DA L+ +
Sbjct: 187 DTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>sp|B1XTU3|RS2_POLNS 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rpsB PE=3 SV=1
Length = 249
Score = 303 bits (777), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 178/219 (81%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+
Sbjct: 7 QMLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M++ G
Sbjct: 67 LFVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMEVAKEAGDWE 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KLS+KEAL R KL + +GGIK++N IPDAIF++DVGYHK A++EA KL IP+I VV
Sbjct: 127 KLSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGIPVIAVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP+G++Y+IPGNDDS+K++ LY GI +A L+ K
Sbjct: 187 DTNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKA 225
>sp|B9MGL7|RS2_ACIET 30S ribosomal protein S2 OS=Acidovorax ebreus (strain TPSY) GN=rpsB
PE=3 SV=1
Length = 250
Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats.
Identities = 141/218 (64%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA LD +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGR 223
>sp|A1VN40|RS2_POLNA 30S ribosomal protein S2 OS=Polaromonas naphthalenivorans (strain
CJ2) GN=rpsB PE=3 SV=1
Length = 250
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 179/219 (81%), Gaps = 1/219 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFW+PKM+ YIFGHRN+IHIINLEK+L M+++A+++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLTANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKR AR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 67 LMVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LD 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK A+ EA KL IP+IGVV
Sbjct: 126 SISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
DTNHSP GI+YVIPGNDDS+K++ALY +GI DA ++ +
Sbjct: 186 DTNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRA 224
>sp|A1W918|RS2_ACISJ 30S ribosomal protein S2 OS=Acidovorax sp. (strain JS42) GN=rpsB
PE=3 SV=1
Length = 250
Score = 301 bits (770), Expect = 2e-80, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 67 LMVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVV
Sbjct: 126 SMSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NHSP+GI+YVIPGNDDSAK++ALY +GI DA L+ +
Sbjct: 186 DSNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGR 223
>sp|A9BMN2|RS2_DELAS 30S ribosomal protein S2 OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=rpsB PE=3 SV=1
Length = 250
Score = 300 bits (769), Expect = 3e-80, Method: Composition-based stats.
Identities = 139/218 (63%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A +++ QL + GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLASNGGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
L VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 67 LMVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LE 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AV+EA KL IP++GVV
Sbjct: 126 AMSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGIPLVGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
D+NH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 186 DSNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>sp|B1XXJ5|RS2_LEPCP 30S ribosomal protein S2 OS=Leptothrix cholodnii (strain ATCC 51168
/ LMG 8142 / SP-6) GN=rpsB PE=3 SV=1
Length = 248
Score = 299 bits (765), Expect = 9e-80, Method: Composition-based stats.
Identities = 138/218 (63%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKT+ ++ +A +Y QL +GT+
Sbjct: 7 EMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLAGKRGTI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR V+A EA RAGMPF++ RWLGG+LTNFKT+K S+++LKEM + G+ +
Sbjct: 67 LFVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQVEAGT-Q 125
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KKEAL+F R+ KL + IGGI++MN +PDA+F+IDVG+HK A++EA KL IP+IGVV
Sbjct: 126 PAIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGIPVIGVV 185
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNHSP GI+YVIPGNDDSAK++ALY + + DA ++ K
Sbjct: 186 DTNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGK 223
>sp|Q0AEH4|RS2_NITEC 30S ribosomal protein S2 OS=Nitrosomonas eutropha (strain C91)
GN=rpsB PE=3 SV=1
Length = 251
Score = 297 bits (760), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 173/218 (79%)
Query: 175 KIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 234
++++AGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE TL M+ A+ Y +L +K T+
Sbjct: 7 QMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAANKETI 66
Query: 235 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 294
LFVGTKRQAR ++ EA+R G P+++QRWLGG+LTNFKTI+ SI+RL++M+ + +G++
Sbjct: 67 LFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDGTLN 126
Query: 295 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVV 354
KL KKEAL F R+ KLN +GGIK M +PDA+F+IDVGY KG + EA KL IP++GVV
Sbjct: 127 KLVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGIPVVGVV 186
Query: 355 DTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
DTNH+P GI YVIPGNDDS+++I LY + + DA L+ +
Sbjct: 187 DTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGR 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 347,836,415
Number of Sequences: 539616
Number of extensions: 14783944
Number of successful extensions: 55660
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3188
Number of HSP's successfully gapped in prelim test: 298
Number of HSP's that attempted gapping in prelim test: 49395
Number of HSP's gapped (non-prelim): 4107
length of query: 1012
length of database: 191,569,459
effective HSP length: 128
effective length of query: 884
effective length of database: 122,498,611
effective search space: 108288772124
effective search space used: 108288772124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)