RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy3752
(1012 letters)
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer
RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia
coli} PDB: 2ykr_B 3fih_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B
3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 3i1m_B
1vs7_B* 3e1a_B 3e1c_B 1vs5_B 3i1o_B 3i1q_B ...
Length = 218
Score = 363 bits (934), Expect = e-119
Identities = 102/217 (47%), Positives = 153/217 (70%)
Query: 177 MQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLLF 236
++AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +LF
Sbjct: 2 LKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILF 61
Query: 237 VGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKL 296
VGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ KL
Sbjct: 62 VGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKL 121
Query: 297 SKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDT 356
+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VDT
Sbjct: 122 TKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181
Query: 357 NHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 393
N PDG+++VIPGNDD+ +++ LY + + ++
Sbjct: 182 NSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRS 218
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding,
metal-binding, zinc-finger, translation; HET: TM2 PAR;
2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E*
1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B
1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B*
1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Length = 256
Score = 361 bits (929), Expect = e-118
Identities = 100/231 (43%), Positives = 148/231 (64%)
Query: 177 MQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLLF 236
++AGVHFGH+ + WNPK + YI+ RN IHII+L+KT+ E+ R+I L GT+LF
Sbjct: 11 LEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILF 70
Query: 237 VGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKL 296
VGTK+QA+ ++ EA RAGMP+++QRWLGG+LTNFKTI + RL+E++ + I +
Sbjct: 71 VGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEER 130
Query: 297 SKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDT 356
KKE + + +L + + G + + +PDAIF++D AV EA KL IP+I + DT
Sbjct: 131 PKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190
Query: 357 NHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
+ PD ++Y+IPGNDD+ +SI L VD + A+ S + A + E
Sbjct: 191 DSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE 241
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast
ribosome, ribonucleoprotein particle, macromolecular
complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Length = 231
Score = 357 bits (918), Expect = e-117
Identities = 82/216 (37%), Positives = 124/216 (57%)
Query: 177 MQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLLF 236
M+AGVHFGH TR WNP+MS YI IHIINL +T +A ++ L
Sbjct: 10 MEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFLI 69
Query: 237 VGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKL 296
VGTK +A +A A+RA +++++WLGG+LTN+ T +T + + +++ + T G + +L
Sbjct: 70 VGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARL 129
Query: 297 SKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDT 356
K++A + R+ L +GGIK M +PD + I+D A+ E I L IP I ++DT
Sbjct: 130 PKRDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189
Query: 357 NHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
N +PD + IP NDD+ SI L +V A + +
Sbjct: 190 NCNPDLADISIPANDDAIASIRLILTKLVFAICEGR 225
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST
initiative, NEW YORK SGX research center for structural
GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP:
c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Length = 247
Score = 245 bits (627), Expect = 8e-75
Identities = 103/224 (45%), Positives = 153/224 (68%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEAL D I+ +I+ + EI E+V G+E+++V+GGGN+ RG ++R D
Sbjct: 17 GEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRVVGD 76
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT++N LA+ D L ++ + + +MSA + ++Y AIK L E +VVIF+ G
Sbjct: 77 HMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAG 136
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+TA LR EI+A+++LKATKVDG+Y+ DP K A +YK +++ EVI K+L
Sbjct: 137 TGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDKEL 196
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 823
++MD +AF+ RD +PIRVF++ K GAL++V+ G EGT + E
Sbjct: 197 KVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICE 240
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation,
ATP-binding, nucleotid binding, pyrimidine biosynthesis,
transferase; 2.34A {Xanthomonas campestris PV} PDB:
3ek5_A
Length = 243
Score = 245 bits (626), Expect = 1e-74
Identities = 111/222 (50%), Positives = 148/222 (66%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEALM Y I+ +I + E+ E G ++A+VIGGGNI RG +DR T D
Sbjct: 18 GEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRVTGD 77
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
+MGMLAT+IN+LA+ D L K G VMSAI I E +I AI++LE+G++ IFA G
Sbjct: 78 HMGMLATVINALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAG 137
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTD+ AALRA EI A+++LKATKVDG+Y+ DP K A+ Y +T+DEVI + L
Sbjct: 138 TGNPFFTTDSGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGL 197
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
E+MD+ AF+ RD LP+R+F + + G L R++ G GTLV
Sbjct: 198 EVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLV 239
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural
genomics, structure initiative, PSI; 2.60A {Neisseria
meningitidis} SCOP: c.73.1.3
Length = 239
Score = 241 bits (616), Expect = 2e-73
Identities = 123/223 (55%), Positives = 166/223 (74%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GE+LM D + IN I + EI+E+V G+++ IV+GGGNI RG+S + ++DR+TAD
Sbjct: 16 GESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIFRGVSAQAGSMDRATAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGM+AT++N+LAL D GI + V SA+S+++ E+Y AI+YLEEGKVVIFA G
Sbjct: 76 YMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAETYARPKAIQYLEEGKVVIFAAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
GNPFFTTDT AALR AE+ +++LKAT VDG+Y +DP K SA Y+ ITFDE + K L
Sbjct: 136 TGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLKNL 195
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 822
++MD+TAF+ CR++KL I VF I K G+LKRVI G++EGTLV+
Sbjct: 196 KVMDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVH 238
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP
kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium
tuberculosis}
Length = 281
Score = 242 bits (619), Expect = 4e-73
Identities = 92/222 (41%), Positives = 146/222 (65%), Gaps = 1/222 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GE G ++ ++ + +I+++V G+++A+VIGGGN RG + ++R+ +D
Sbjct: 59 GEMFG-GGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGMERTRSD 117
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
YMGML T++NSLAL D L K GI++ V +AI++ + E Y+PL A+++LE+G+VVIF G
Sbjct: 118 YMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAG 177
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 779
+G P+F+TDTTAA RA EI A+++L A VDG++ DP A + ++ EV+ + L
Sbjct: 178 MGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLDRGL 237
Query: 780 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+ D+TAFS C D +PI VF+++ G + R + G+ GTLV
Sbjct: 238 RVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLV 279
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino
acid kinase family; 2.50A {Ureaplasma parvum}
Length = 256
Score = 241 bits (615), Expect = 5e-73
Identities = 96/258 (37%), Positives = 153/258 (59%), Gaps = 6/258 (2%)
Query: 568 AAMKPIALSSDQIPKKIIEKEYSLAVLKAQQL-GEALMKGDAYNINSSIIKNIISEISEI 626
++ SS +P+ V+K + G L + D+ I+ I ++ +I +I
Sbjct: 3 SSHHHHHHSSGLVPRGSHMMRKQRIVIK---ISGACLKQNDSSIIDFIKINDLAEQIEKI 59
Query: 627 VSCGIELAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHV 686
I ++IV+GGGNI RG K ++DR+ AD MGM+ATIIN LAL + LN + + V
Sbjct: 60 SKKYI-VSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIV 118
Query: 687 MSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKAEIILKA 746
+SAI +K + N K +E+ +V+IF G G P+FTTD+ AA+RAAE ++ IIL
Sbjct: 119 LSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILMG 178
Query: 747 TK-VDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKS 805
VDG+Y+SDP +A Y+ ITF+ +++ L++MD+TA + C++ + + VF+I K
Sbjct: 179 KNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKP 238
Query: 806 GALKRVIEGKNEGTLVYE 823
A+ V+E KN+ T+V +
Sbjct: 239 NAIVDVLEKKNKYTIVSK 256
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter
pylori} PDB: 4a7x_A*
Length = 240
Score = 239 bits (612), Expect = 1e-72
Identities = 104/224 (46%), Positives = 150/224 (66%), Gaps = 2/224 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGIS-NKIQNIDRSTA 658
GEAL + + I+ ++ +I EI +V IE+ IVIGGGNI RG+S + I R++
Sbjct: 16 GEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSG 75
Query: 659 DYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAG 718
DYMGMLAT+IN++A+ + L G+ + V SAI I++ ESYI AI++LE+G+VVIF
Sbjct: 76 DYMGMLATVINAVAMQEALEHIGLDTRVQSAIEIKEICESYIYRKAIRHLEKGRVVIFGA 135
Query: 719 GIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKK 778
G GNPFFTTDT A LRA EI +++I+KATKVDGIY+ DPNK A +++++ +
Sbjct: 136 GTGNPFFTTDTAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIGD 195
Query: 779 LEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEG-KNEGTLV 821
+E+MD TA S +D KLPI V ++ K G L +VI+ + ++V
Sbjct: 196 IEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMV 239
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein
structure initiative, NYSGXRC, PYRH, putative uridylate
kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP:
c.73.1.3
Length = 252
Score = 237 bits (607), Expect = 6e-72
Identities = 94/223 (42%), Positives = 148/223 (66%), Gaps = 1/223 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
GEAL I+ ++ I EI+E+ G+++A+VIGGGN+ RG +DR AD
Sbjct: 16 GEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRVQAD 75
Query: 660 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 719
Y GML T++N+L + D L G+ + V +AI ++ E YI A+++LE+ ++V+F G
Sbjct: 76 YTGMLGTVMNALVMADSLQHYGVDTRVQTAIPMQNVAEPYIRGRALRHLEKNRIVVFGAG 135
Query: 720 IGNPFFTTDTTAALRAAEIKAEIILKAT-KVDGIYNSDPNKCLSAIIYKKITFDEVISKK 778
IG+P+F+TDTTAALRAAEI+A+ IL A VDG+YN+DP K +A+ + ++T EVI +
Sbjct: 136 IGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKRG 195
Query: 779 LEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
L+IMD+TA + D + + VF++ ++G ++RV+ G++ GT V
Sbjct: 196 LKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTV 238
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure,
metal binding protein; HET: ATP; 1.60A {Azotobacter
vinelandii}
Length = 270
Score = 237 bits (606), Expect = 1e-71
Identities = 41/229 (17%), Positives = 87/229 (37%), Gaps = 13/229 (5%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQ--NIDRST 657
G++++ + ++ EI +L I G G R + + +
Sbjct: 45 GQSVIDRGRAAVYP-----LVDEIVAARK-NHKLLIGTGAGTRARHLYSIAAGLGLPAGV 98
Query: 658 ADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFA 717
+G N+ L +L K GI + +S + + + K+ +
Sbjct: 99 LAQLGSSVADQNAAMLGQLLAKHGIPVVGGAGLSAVPLSLAEVNAVVFSGMPPYKLWMRP 158
Query: 718 GGIGN-PFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVIS 776
G P + TD L A + + ++ DG+Y ++P A +I+ DE+ +
Sbjct: 159 AAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIPRISVDEMKA 218
Query: 777 KKLE--IMDSTAFSFCRDQK--LPIRVFSIIKSGALKRVIEGKNEGTLV 821
K L I++ + + ++V + + G L R + G++ GT++
Sbjct: 219 KGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGTII 267
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine
biosynthesis, ATP-binding, nucleotide-binding, OPPF,
PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Length = 255
Score = 232 bits (593), Expect = 7e-70
Identities = 91/224 (40%), Positives = 134/224 (59%), Gaps = 2/224 (0%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDRSTAD 659
G AL + NS +++I +EI IV GIE++IVIGGGNI RG + IDR AD
Sbjct: 21 GGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAEEWGIDRVEAD 80
Query: 660 YMGMLATIINSLALFDILNK-SGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAG 718
+G L TIINSL L +L + VM++I E YI L A+ +L+ G +VIF G
Sbjct: 81 NIGTLGTIINSLMLRGVLTSKTNKEVRVMTSIPFNAVAEPYIRLRAVHHLDNGYIVIFGG 140
Query: 719 GIGNPFFTTDTTAALRAAEIKAEIILKATK-VDGIYNSDPNKCLSAIIYKKITFDEVISK 777
G G PF TTD + RA E+ ++ IL A + VDG++ SDP SA +Y+K+ +++V+ +
Sbjct: 141 GNGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ 200
Query: 778 KLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+++MD A RD LP VF+ + G ++R+ G++ GTL+
Sbjct: 201 NIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLI 244
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A
{Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6
2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J
3j0e_G
Length = 185
Score = 227 bits (580), Expect = 6e-69
Identities = 72/184 (39%), Positives = 126/184 (68%)
Query: 827 MIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITL 886
M + ++ T+ M ++++L+ NL +RTGRAN +L +++V+Y+ L +IA +T
Sbjct: 1 MTLKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTA 60
Query: 887 FNSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKN 946
+ T+ +Q +++ I+KAI +++LGLNP+ +G+ +Y++IPPLT+ERR+++V+ ++
Sbjct: 61 PDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQ 120
Query: 947 ITEETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKE 1006
EE +++IR IRR++ + LKKL K LS D RA+ +IQK+TD+FI + +QL KE
Sbjct: 121 YAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKE 180
Query: 1007 KEIL 1010
+EIL
Sbjct: 181 QEIL 184
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio
parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Length = 185
Score = 225 bits (577), Expect = 2e-68
Identities = 79/183 (43%), Positives = 132/183 (72%)
Query: 829 ISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFN 888
I++IKK+ +++M +++ LK NL KVRTGRA+ +L I V+Y+ T L ++AN+ +
Sbjct: 2 INEIKKDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAED 61
Query: 889 SHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNIT 948
+ T++I F+KE++ ++KAI ++LGLNP G II V +PPLT+ERR+++VK+++
Sbjct: 62 ARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEA 121
Query: 949 EETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKE 1008
E ++++R IRRD+N +LK LLK+K +S D + +AQ +IQKLTD + +I+++L KEKE
Sbjct: 122 EGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKE 181
Query: 1009 ILT 1011
++
Sbjct: 182 LME 184
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national
institute of allergy AN infectious diseases; 2.65A
{Bacillus anthracis}
Length = 209
Score = 226 bits (579), Expect = 2e-68
Identities = 73/190 (38%), Positives = 120/190 (63%), Gaps = 1/190 (0%)
Query: 822 YEIYIMIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKI 881
++ M + K + +KM + L VR GRA+ +LD +QV Y+ T ++++
Sbjct: 20 FQSNAMG-QQVLKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQL 78
Query: 882 ANITLFNSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIV 941
ANIT+ + + IQP++K I+KAI +A+LGLNP+ G +I ++ P LT+ERR ++V
Sbjct: 79 ANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLV 138
Query: 942 KLIKNITEETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQL 1001
K++K EE K+++R +RRD N++LKKL K ++ D+ DIQK TDK+I +++++
Sbjct: 139 KVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEI 198
Query: 1002 LINKEKEILT 1011
NKEKEI+
Sbjct: 199 AKNKEKEIME 208
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle,
protein synthesis, translation; 2.15A {Mycobacterium
tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Length = 185
Score = 225 bits (575), Expect = 3e-68
Identities = 64/183 (34%), Positives = 111/183 (60%)
Query: 829 ISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFN 888
I + + ++KM + + +++L +RTGRAN GM I + Y+ T + ++A+I +
Sbjct: 2 IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPE 61
Query: 889 SHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNIT 948
+ + I+P+E I+ AI ++LG+NPT G +I V++P LT+ERR E+VK K+
Sbjct: 62 ARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKG 121
Query: 949 EETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKE 1008
EE K+S+R IRR + E L ++ K D RA+ D+ K T +++ +I++L+ +KE E
Sbjct: 122 EEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGE 181
Query: 1009 ILT 1011
+L
Sbjct: 182 LLE 184
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli}
SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Length = 185
Score = 224 bits (574), Expect = 5e-68
Identities = 73/182 (40%), Positives = 126/182 (69%)
Query: 829 ISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFN 888
ISDI+K+ + +M ++ K + K+RTGRA+ +LD I V+Y+ T L ++A++T+ +
Sbjct: 2 ISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVED 61
Query: 889 SHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNIT 948
S T+ I F++ MS ++KAI ++LGLNP G+ I V +PPLT+ERR+++ K+++
Sbjct: 62 SRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEA 121
Query: 949 EETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKE 1008
E+ ++++R + RD+N+ +K LLK+K +S D++ R+Q D+QKLTD I +I L +KE E
Sbjct: 122 EQARVAVRNVGRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAE 181
Query: 1009 IL 1010
++
Sbjct: 182 LM 183
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta
sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB:
1t1m_C
Length = 185
Score = 224 bits (573), Expect = 5e-68
Identities = 68/182 (37%), Positives = 121/182 (66%)
Query: 829 ISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFN 888
++ K K+KM T++ +++ L+K+RTG+ + +L+ I+V Y+ T + ++A I++
Sbjct: 2 VNPFIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISE 61
Query: 889 SHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNIT 948
T+ I+P++K + S+I+KAIN ++LGLNP GN+I + P T E+RE+ VK K I
Sbjct: 62 ERTLVIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIV 121
Query: 949 EETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKE 1008
EE KI+IR IRR+ + +K+ K ++ D+ R + +IQKLTD+FI +++++ K++E
Sbjct: 122 EEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEE 181
Query: 1009 IL 1010
I+
Sbjct: 182 IM 183
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group
transfer, pyrimidine biosynthesis, transferase; 2.40A
{Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A*
2bmu_A* 2bri_A*
Length = 244
Score = 225 bits (576), Expect = 1e-67
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN--KIQNIDRST 657
G L+ + N + IK I +++++ E+A+V+GGG + R + N +
Sbjct: 28 GSVLV-PE--NPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFNSSETF 83
Query: 658 ADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFA 717
D++G+ T N++ L L + V A K ++ K+ +
Sbjct: 84 KDFIGIQITRANAMLLIAALREKAYPVVVED------------FWEAWKAVQLKKIPVMG 131
Query: 718 GGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVI-- 775
G +P TTD AAL A +KA++++ T VDG+Y +DP K +A KK+ +E++
Sbjct: 132 GT--HPGHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEI 189
Query: 776 -------SKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
+ ++D A + V + L RVI+G + GT +
Sbjct: 190 VGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTI 242
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP
kinase, aspartokinase fold, pyrimidine nucleotide
synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus
solfataricus} PDB: 2j4k_A* 2j4l_A*
Length = 226
Score = 224 bits (573), Expect = 2e-67
Identities = 45/234 (19%), Positives = 87/234 (37%), Gaps = 31/234 (13%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN--KIQNIDRST 657
G+ + + + + I E+ G + IV GGG+ R + I +
Sbjct: 9 GKFFDEDNV-----DNLIVLRQSIKELADNGFRVGIVTGGGSTARRYIKLAREIGIGEAY 63
Query: 658 ADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFA 717
D +G+ A+ +N+ + L + I+ GKVV+
Sbjct: 64 LDLLGIWASRLNAYLVMFSLQDLAYMHVP------------QSLEEFIQDWSHGKVVVTG 111
Query: 718 GGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDE---- 773
G P +T AAL A ++ ++ AT VDG+Y DP + +T +
Sbjct: 112 GF--QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKI 169
Query: 774 ------VISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
V + E++D A K+ + V + K + +++G+ +++
Sbjct: 170 LEGSQSVQAGTYELLDPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSII 223
>3lyp_A Stringent starvation protein A; structural genomics,
GST-superfamily, SSPA, stringent starva protein A
homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB:
3mdk_A
Length = 215
Score = 215 bits (550), Expect = 2e-64
Identities = 66/186 (35%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ EI ++ +P + +NPYG +P LV+RDL L+ES ++ EY+DER+P+P L+ P
Sbjct: 32 VSAEIISVEAGRQPPKLIEVNPYGSLPTLVDRDLALWESTVVMEYLDERYPHPPLLPVYP 91
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RA +RL++ +++ + ++ + R K +AR+E+R+ L ++PLF +
Sbjct: 92 VARANSRLLIHRIQRDWCGQVDLILDPRTKE--AARVQARKELRESLTGVSPLFADKPFF 149
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTPAEKIMQAG 180
L +E S++D + P+LWRL GI L + A PL+ Y ER F+R ++ SL+ E+ M+ G
Sbjct: 150 LSEEQSLVDCCLLPILWRLPVLGIELPRQAKPLLDYMERQFAREAFQASLSGVERDMREG 209
Query: 181 VHFGHQ 186
H H
Sbjct: 210 HHHHHH 215
>2ij9_A Uridylate kinase; structural genomics, protein structure
initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus}
SCOP: c.73.1.3
Length = 219
Score = 210 bits (537), Expect = 2e-62
Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 600 GEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN--KIQNIDRST 657
G L ++ I+ I + ++ +V+GGG + R + +
Sbjct: 9 GSVLS-NES-----EKIREFAKTIESVAQQN-QVFVVVGGGKLAREYIKSARELGASETF 61
Query: 658 ADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFA 717
DY+G+ AT +N++ L + + + A + + +VV+
Sbjct: 62 CDYIGIAATRLNAMLLISAIPSAAK-------------KVPVDFMEAEELSKLYRVVVMG 108
Query: 718 GGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISK 777
G P TTD TAAL A IKA++ + AT VDG+Y++DP SA+ Y +++ +++
Sbjct: 109 GT--FPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEI 166
Query: 778 ---------KLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 821
++D A K+ V + + ++G+ GT++
Sbjct: 167 VSRSSAKAGTNVVIDLLAAKIIERSKIKTYVIL-GTPENIMKAVKGEAVGTVI 218
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus}
SCOP: d.67.3.1
Length = 184
Score = 207 bits (529), Expect = 5e-62
Identities = 69/183 (37%), Positives = 118/183 (64%), Gaps = 4/183 (2%)
Query: 829 ISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFN 888
+ DI K ++ M ++ K + +RT RA+ +++ I+V+Y+ + ++ I++
Sbjct: 5 LEDIFKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPE 64
Query: 889 SHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNIT 948
+ I IQ +++ I+KAI L LNPT+QGN+I V++PPLT+ERR E+V+L+ IT
Sbjct: 65 HNQIVIQVWDQNAVPAIEKAIR-EELNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKIT 123
Query: 949 EETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKE 1008
EE ++ +R +RR++ E +++L +S D + RA +QKLTDK+I EIN+L+ KEKE
Sbjct: 124 EEARVRVRNVRREAKEMIEELEG---ISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 180
Query: 1009 ILT 1011
I++
Sbjct: 181 IMS 183
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT;
protein-protein complex, translation; HET: MSE; 2.20A
{Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Length = 291
Score = 208 bits (532), Expect = 7e-61
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 390 DAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILN----ISNRNAKDG 445
+ + +LR KT + CKKAL G L +AE L + K+ + + R K+G
Sbjct: 4 SKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEG 63
Query: 446 VIAIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPINLDQLNNLK----- 500
+I + LVE+NCETDFV++N +F + +++A + DQL+
Sbjct: 64 LIGLLQEGDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLSTYSKGFLN 123
Query: 501 ---------IKNNLLTVDEKCKELISRIGENIKIRRFKLFKTNN--NLISYLHDN----- 544
++ ++ I ++GEN+ ++R K + SY+H
Sbjct: 124 SSELSELPAGPEREGSLKDQLALAIGKLGENMILKRAAWVKVPAGFYVGSYVHGAMHSPS 183
Query: 545 -------KIGVIVEYNGDNESAV-----KDVAMHIAAMKPIALSS-DQIPKKIIEKE 588
K G +V A + + H+ M P+++ S D P E +
Sbjct: 184 LHNLVLGKYGALVICETSELKANLADLGRRLGQHVVGMAPLSVGSLDDEPGGEAETK 240
>3lyk_A Stringent starvation protein A homolog; structural genomics,
GST-superfamily, SSPA, PSI-2, protein structure
initiative; 2.10A {Haemophilus influenzae}
Length = 216
Score = 205 bits (523), Expect = 1e-60
Identities = 65/176 (36%), Positives = 111/176 (63%), Gaps = 5/176 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ +E ++DL P+++ +NPYG VP LV+RDL+L+ S II EY+DERFP+P LM P
Sbjct: 30 VLYENAEVDLQALPEDLMELNPYGTVPTLVDRDLVLFNSRIIMEYLDERFPHPPLMQVYP 89
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ RA+ RL++L E++ + L EN K A +++++ L+ +AP+F + Y
Sbjct: 90 VSRAKDRLLMLRIEQDWYPTLAKAENGTE----KEKTSALKQLKEELLGIAPIFQQMPYF 145
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTPAEK 175
+ +EF ++D +APLLW+L + G+ + + S + Y ER+F+R S+++S+ A
Sbjct: 146 MNEEFGLVDCYVAPLLWKLKHLGVEFTGTGSKAIKAYMERVFTRDSFLQSVGEAAP 201
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET:
CIT; 2.02A {Yersinia pestis}
Length = 213
Score = 204 bits (520), Expect = 3e-60
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ EI ++ N P ++ +NPY VP LV+R+L LYES II EY+DERFP+P LM P
Sbjct: 34 VSVEIEQVEADNLPQDLIDLNPYRTVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYP 93
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
+ R +RLM+ E + + LY +E + + + AR+++R+ L+++AP+F + +
Sbjct: 94 VARGSSRLMMHRIEHDWYSLLYKIEQGNAQEA----EAARKQLREELLSIAPVFNETPFF 149
Query: 121 LGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTPAEKIM 177
+ +EFS++D +APLLWRL GI + + S L Y R+F R +++ SLT AE+ M
Sbjct: 150 MSEEFSLVDCYLAPLLWRLPVLGIEFTGAGSKELKGYMTRVFERDAFLASLTEAEREM 207
>4dej_A Glutathione S-transferase related protein; transferase-like
protein, transcription regulation; 2.90A {Idiomarina
loihiensis}
Length = 231
Score = 197 bits (503), Expect = 9e-58
Identities = 63/180 (35%), Positives = 109/180 (60%), Gaps = 10/180 (5%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQV-PILVERDLILYESNIINEYIDERFPYPQLMSSD 59
+ EI + + P+++ ++NPY + P LV+R+L+LY + II EY+DERFP+P LM
Sbjct: 36 VGVEITYVTDESTPEDLLQLNPYPEAKPTLVDRELVLYNAQIIMEYLDERFPHPPLMPVY 95
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
P+ R +RLM+ E++ + ++ + AR+E+++ +++LAP+F Y
Sbjct: 96 PVARGTSRLMMYRIERDWYSLAEKIQKNDAQ--------ARQELKEGILSLAPIFADTPY 147
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTPAEKIMQ 178
+ +EFS++D +APLLWRL YGI+L + + +Y R+F R ++ +SLT EK +
Sbjct: 148 FMSEEFSLVDCYLAPLLWRLPAYGIDLEGQGAKEIKQYMVRLFERKTFQDSLTEEEKELA 207
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase,
dehydroascorbate reductase, reductase; 1.70A {Homo
sapiens} PDB: 3q19_A* 3qag_A*
Length = 239
Score = 194 bits (495), Expect = 2e-56
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPIL-VERDLILYESNIINEYIDERFPYPQLMSSD 59
+ E+ +I+L NKP+ + +P+G +P+L + ++YES I EY+D+ +P +L D
Sbjct: 47 IRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQSQLIYESVIACEYLDDAYPGRKLFPYD 106
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKN-- 117
P RAR +++L F K + L R+ + + +R L +
Sbjct: 107 PYERARQKMLLELFSKVPHLTKECLVALRSG---RESTNLKAALRQEFSNLEEILEYQNT 163
Query: 118 KYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTPAEKI 176
+ G SM+D ++ P RLD YGI S +P L + + P+ L
Sbjct: 164 TFFGGTSISMIDYLLWPWFERLDVYGILDCVSHTPALRLWISAMKWDPTVSALLMDKSIF 223
Query: 177 MQ 178
Sbjct: 224 QG 225
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A
{Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Length = 208
Score = 192 bits (490), Expect = 3e-56
Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 51/227 (22%)
Query: 167 MESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIY 225
E L P + + AGVH G Q + + M +IF R + ++++++ K A +++
Sbjct: 7 YEYLVPPDDYLAAGVHIGTQIKTGD--MKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLS 64
Query: 226 QLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD 285
+ + +L V ++ A + + G +I R++ G LTN
Sbjct: 65 R--YEPSKILLVAARQYAHKPVQMFSKVVGSDYIVGRFIPGTLTNP-------------- 108
Query: 286 LFITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIK 345
+ + P+ +F+ D K AVSEA
Sbjct: 109 --------------------------------MLSEYREPEVVFVNDPAIDKQAVSEATA 136
Query: 346 LNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+ IP++ + D+N+S ++ VIP N+ +++A+ + +
Sbjct: 137 VGIPVVALCDSNNSSADVDLVIPTNNKGRRALAIVYWLLAREIAKIR 183
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB:
2xzn_B
Length = 241
Score = 182 bits (463), Expect = 3e-52
Identities = 48/240 (20%), Positives = 80/240 (33%), Gaps = 51/240 (21%)
Query: 169 SLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIYQL 227
++++ + H T N +M YI N IH IN+E+T + A R I +
Sbjct: 6 KQDDIKRLLASNCH--QATINLNNQMKRYISHKGVNGIHYINIEETWQKIKLAARVIAAV 63
Query: 228 GFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLF 287
+ ++ R I RW G LTN++T+K
Sbjct: 64 QHPEDVMVVCSRIYGQRAAIKFAGYTHCKSTSSSRWTPGTLTNYQTLK------------ 111
Query: 288 ITNGSIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLN 347
P + + D A+ EA +N
Sbjct: 112 ----------------------------------YEEPRVLIVTDPRSDFQAIKEASYVN 137
Query: 348 IPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
IP+I + D++ ++ VIP N+ S +SI++ I + GEL +M
Sbjct: 138 IPVIALCDSDSPLAYVDVVIPCNNRSTESISMIYWMIAREVKILR--GELSKDEEWEVMV 195
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase;
HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Length = 241
Score = 181 bits (461), Expect = 6e-52
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLMSSD 59
+ E+ +I+L NKP+ F+ NP+G VP+L ++YES I EY+DE +P +L+ D
Sbjct: 47 IRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDD 106
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNK- 118
P +A +++L F K + + ++ + +EE R L + K
Sbjct: 107 PYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAG----LKEEFRKEFTKLEEVLTNKKT 162
Query: 119 -YMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTPAEKI 176
+ G+ SM+D +I P RL+ +N +P L + + P+ LT +
Sbjct: 163 TFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKDW 222
Query: 177 MQ 178
Sbjct: 223 QG 224
>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal
domain-like fold, structura genomics, joint center for
structural genomics; 2.05A {Ralstonia eutropha}
Length = 214
Score = 178 bits (453), Expect = 4e-51
Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 10/186 (5%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ FE + + P G+VP ++ L ES +INEY++ +P L+ DP
Sbjct: 26 VPFEEVLAWI---GETDTTATPAGKVPYMITESGSLCESEVINEYLEAAYPQTPLLPRDP 82
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENER---NKTSIKGYKRAREEIRDRLITLAPLFLKN 117
+ + R ++ E + + L E K S +R + + + A L +
Sbjct: 83 MQAGKVREIVTFLELYLELTARELYPEAFFGGKVSDNVKERQLKLLSRYVPAFAKLAKFS 142
Query: 118 KYMLGDEFSMLDVVIAPLLWRLDYYGI----NLSKSASPLIKYAERIFSRPSYMESLTPA 173
Y+ GD F++ D A L + + P+ +Y + + RPS +
Sbjct: 143 PYVAGDTFTLADCAAAVHLPLVSSCTKIIYGKDLLADLPVKEYLKTLSERPSVQKVNADR 202
Query: 174 EKIMQA 179
+ +
Sbjct: 203 KANTEL 208
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A
{Bombyx mori}
Length = 246
Score = 176 bits (447), Expect = 5e-50
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 21/191 (10%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILV----ERDLILYESNIINEYIDERFPYPQLM 56
+ +E+ +D P+ NP ++P+L + D L+ES +I +Y+DE++ L
Sbjct: 50 IKYEVYRLDPLRLPEWFRAKNPRLKIPVLEIPTDQGDRFLFESVVICDYLDEKYTRHTLH 109
Query: 57 SSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK 116
S DP ++A+ RL++ F + I L + E+I L
Sbjct: 110 SHDPYVKAQDRLLIERFNELIKGSLECFDTNFAF--------GSEQIIQTLEIFEKELTN 161
Query: 117 N--KYMLGDEFSMLDVVIAPLLWRLDY------YGINLSKSASP-LIKYAERIFSRPSYM 167
Y G+ MLD ++ P + RL KS P + +++
Sbjct: 162 RGTNYFGGNRPGMLDYMVWPWVERLYLLRCVNDRKFVEKKSLFPNFADWGDQMQLDDIVK 221
Query: 168 ESLTPAEKIMQ 178
+ ++
Sbjct: 222 KHAHSPQEYFD 232
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal,
ribosomal R ribosomal protein, eukaryotic ribosome,
RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB:
3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Length = 252
Score = 175 bits (446), Expect = 9e-50
Identities = 39/220 (17%), Positives = 72/220 (32%), Gaps = 50/220 (22%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIYQLGFSKG 232
+ ++ A H G + Y+F R + +H+IN+ KT A R I + +
Sbjct: 15 QLLLAANTHLGARN--VQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP-NPE 71
Query: 233 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 292
++ + ++ + + A G I R+ G TN+ T
Sbjct: 72 DVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITR------------------ 113
Query: 293 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 352
P + + D A+ EA +NIP+I
Sbjct: 114 ----------------------------SFKEPRLVIVTDPRSDAQAIKEASYVNIPVIA 145
Query: 353 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+ D + + ++ IP N+ SI L + L +
Sbjct: 146 LTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLR 185
>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH;
1.75A {Ralstonia solanacearum} PDB: 3tot_A*
Length = 226
Score = 174 bits (443), Expect = 1e-49
Identities = 42/192 (21%), Positives = 79/192 (41%), Gaps = 7/192 (3%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLMSSD 59
+D++ D++N I + NP G+VP LV D L++S +I EY D P +L+
Sbjct: 26 IDYQFVLEDVWNADTQIHQFNPLGKVPCLVMDDGGALFDSRVIAEYADTLSPVARLIPPS 85
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLEN----ERNKTSIKGYKRAREEIRDRLITLAPLFL 115
R R + + + + + S R +I + L ++
Sbjct: 86 GRERVEVRCWEALADGLLDAAVALRVEQTQRTPEQRSESWITRQHHKIDEALKAMSRGLA 145
Query: 116 KNKYMLGDEFSMLDVVIAPLLWRLDY--YGINLSKSASPLIKYAERIFSRPSYMESLTPA 173
+ G+ ++ D+ + L LD+ ++ + + L + RI RPS++E+ A
Sbjct: 146 DRTWCNGNHLTLADIAVGCALAYLDFRQPQVDWREQHANLAAFYTRIEKRPSFLETQPQA 205
Query: 174 EKIMQAGVHFGH 185
E + H H
Sbjct: 206 ENLYFQSHHHHH 217
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta
structure, metal binding protein; HET: ATP; 1.60A
{Azotobacter vinelandii}
Length = 276
Score = 175 bits (444), Expect = 3e-49
Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 42/253 (16%)
Query: 589 YSLAVLKAQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISN 648
L V+K +G G + + I ++ E+ +++ L I+ G G R + +
Sbjct: 39 PWLQVVK---IG-----GRVMDRGADAILPLVEELRKLLP-EHRLLILTGAGVRARHVFS 89
Query: 649 --KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 706
+ + + N L +L G+ +
Sbjct: 90 VGLDLGLPVGSLAPLAASEAGQNGHILAAMLASEGV----------SYVEHPTVADQLAI 139
Query: 707 YLEEGKVVIFAG----------GIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSD 756
+L + V+ + G P DT A L A A + VDGIY +D
Sbjct: 140 HLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTAD 199
Query: 757 PNKCL--SAIIYKKITFDEVISKK------LEIMDSTAFSFCRDQKLPIRVFSIIKSGAL 808
PN A + + ++ + ++D A + + ++V + + G L
Sbjct: 200 PNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIE---RVQVVNGLVPGRL 256
Query: 809 KRVIEGKNEGTLV 821
+ G++ GTL+
Sbjct: 257 TAALRGEHVGTLI 269
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal
subunit, ribosomal protein/RNA complex; 8.70A {Canis
familiaris}
Length = 295
Score = 172 bits (438), Expect = 3e-48
Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 52/235 (22%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIYQLGFSKG 232
K + AG H G + +M YI+ + + I+IINL++T A R I + +
Sbjct: 16 LKFLAAGTHLGGTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIE-NPA 72
Query: 233 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 292
+ + ++ + + A G I R+ G TN
Sbjct: 73 DVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTN---------------------- 110
Query: 293 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 352
I+ P + + D ++EA +N+P I
Sbjct: 111 ------------------------QIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIA 146
Query: 353 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIME 407
+ +T+ ++ IP N+ A S+ L + L + G + + +M
Sbjct: 147 LCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMR--GTISREHPWEVMP 199
>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class
GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A
{Glycine max} PDB: 3fhs_A*
Length = 219
Score = 169 bits (430), Expect = 5e-48
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 10/184 (5%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNP-YGQVPILVERDLILYESNIINEYIDERFP-YPQLMSS 58
+ +E ++ DL NK + +MNP + ++P+L+ + ES I +YI+E + L+ S
Sbjct: 28 IKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIEEVWNDRNPLLPS 87
Query: 59 DPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNK 118
DP RA+ R +K+I+ + + + A++E + L L
Sbjct: 88 DPYQRAQTRFWADYVDKKIYDLGRKIWTSKGEEKEA----AKKEFIEALKLLEEQLGDKT 143
Query: 119 YMLGDEFSMLDVVIAPLLWRLDYY----GINLSKSASPLIKYAERIFSRPSYMESLTPAE 174
Y GD +D+ + P Y +N+ I +A+R + S +SL +
Sbjct: 144 YFGGDNLGFVDIALVPFYTWFKAYETFGTLNIESECPKFIAWAKRCLQKESVAKSLPDQQ 203
Query: 175 KIMQ 178
K+ +
Sbjct: 204 KVYE 207
>3lxz_A Glutathione S-transferase family protein; structural genomics,
PP0183, PSI-2, protein structure initiative; 1.76A
{Pseudomonas putida} PDB: 3pr8_A*
Length = 229
Score = 168 bits (427), Expect = 2e-47
Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 9/187 (4%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ FE P ++P G+VP+L L E+++I +YI++ L+ +DP
Sbjct: 26 LTFEEVTFYGGQAPQ-ALEVSPRGKVPVLETEHGFLSETSVILDYIEQTQGGKALLPADP 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENER---NKTSIKGYKRAREEIRDRLITLAPLFLKN 117
+A+ R +L E I + E ++AR ++ TL
Sbjct: 85 FGQAKVRELLKEIELYIELPARTCYAESFFGMSVEPLIKEKARADLLAGFATLKRNGRFA 144
Query: 118 KYMLGDEFSMLDVVIAPLLWRLDYYGINLSK----SASPLIK-YAERIFSRPSYMESLTP 172
Y+ G++ ++ D++ + + G + + P K + + P L
Sbjct: 145 PYVAGEQLTLADLMFCFSVDLANAVGKKVLNIDFLADFPQAKALLQLMGENPHMPRILAD 204
Query: 173 AEKIMQA 179
E M A
Sbjct: 205 KEASMPA 211
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase
superfamily, CLIC4, NCC27, chloride ION channel, metal
transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Length = 267
Score = 169 bits (428), Expect = 4e-47
Identities = 32/195 (16%), Positives = 76/195 (38%), Gaps = 17/195 (8%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ F + +DL KP ++ + P P + + + N I E+++E P+ + P
Sbjct: 50 VVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSP 109
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFL----- 115
+ F K ++ E N+ +G + +++ + L + P +
Sbjct: 110 KHPESNTAGMDIFAK-FSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSM 168
Query: 116 ------KNKYMLGDEFSMLDVVIAPLLWRL-----DYYGINLSKSASPLIKYAERIFSRP 164
K++ G+E ++ D + P L + Y ++ K + + +Y +SR
Sbjct: 169 EDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRD 228
Query: 165 SYMESLTPAEKIMQA 179
+ + +++ A
Sbjct: 229 EFTNTCPSDKEVEIA 243
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione
S-transferase, N-terminal domain, S genomics; 1.85A
{Escherichia coli}
Length = 215
Score = 166 bits (422), Expect = 5e-47
Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 12/184 (6%)
Query: 1 MDFEIRDIDLF---NKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYP---Q 54
+ F I+ IDL + +VP+L D L ES+ I EY+++RF P +
Sbjct: 32 LSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWER 91
Query: 55 LMSSDPLMRARARLMLLNFEKEIFIH---LYMLENERNKTSIKGYKRAREEIRDRLITLA 111
+ D RARAR + ++ +
Sbjct: 92 IYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAE 151
Query: 112 PLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLT 171
L + + L E+ + D +A ++ RL +G + + YA + R S +
Sbjct: 152 HLLVLGQPNLFGEWCIADTDLALMINRLVLHGDEVPERLVD---YATFQWQRASVQRFIA 208
Query: 172 PAEK 175
+ K
Sbjct: 209 LSAK 212
>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis,
DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania
infantum}
Length = 471
Score = 174 bits (442), Expect = 7e-47
Identities = 45/241 (18%), Positives = 76/241 (31%), Gaps = 30/241 (12%)
Query: 1 MDFEIRDIDLFNK-PDNIFRMNPYGQVPILVERDL---ILYESNIINEYIDER-FPYPQL 55
+ ++ + L + P ++NP VP L + ++ES +I +Y+D P L
Sbjct: 50 VSYDRVAVGLREEMPQWYKQINPRETVPTLEVGNADKRFMFESMLIAQYLDNSGAPAGAL 109
Query: 56 MSSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFL 115
M S R + L I +L + + K + LA
Sbjct: 110 MGSSAAQRHQIEFFLAQVGDFIGAAHGLLRDPLSGEKRKAMDDNAAYVDG---LLAANQT 166
Query: 116 KNKYMLGDEFSMLDVVIAPLLWRL-----DYYGINLSKSASPLIKYAERIFSRPSYMESL 170
Y EF+M DV + P L RL Y G ++ A + R S E+
Sbjct: 167 TGPYYCDGEFTMADVALVPFLVRLKPALMYYAGYDVFCKAPRMKALWAAAAQRASVRETS 226
Query: 171 TPAEKIM---QAGVHFGHQTRFWNPKMSSYI-----FGHRNKIHIINLEKTLYMYEKAIR 222
A + + + V N Y F R ++ + +
Sbjct: 227 PTAAQCIENYRHLVPESAPMMGANGGHVLYSNLFCPFVDRARL---------ASELRKFQ 277
Query: 223 Y 223
Sbjct: 278 M 278
Score = 163 bits (415), Expect = 3e-43
Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 12/187 (6%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVP-ILVERDLILYESNIINEYIDERFPY--PQLMS 57
I ++ L +P+ +NP VP + ++ES +I +YID +
Sbjct: 276 FQMHIVEVPLHPQPEWYKYINPRDTVPALFTPSGEAVHESQLIVQYIDCVATKGSALVPR 335
Query: 58 SDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKN 117
D + L + + + A E+ +L F +
Sbjct: 336 GDAEKEYEVGF-FVENAGYFVGGLMSWIIRGGEDAKAELQWAAGELEQQL--AKHPFGEG 392
Query: 118 KYMLGDEFSMLDVVIAPLLWRLDYY------GINLSKSASPLIKYAERIFSRPSYMESLT 171
+ G + DV I P L R + G +L L AE + P
Sbjct: 393 PFFGGKRMNAGDVAILPFLVRAKAFMPEFSGGYDLFAHFPLLNGLAEAGMATPEAKSVFR 452
Query: 172 PAEKIMQ 178
E+ +
Sbjct: 453 TLEEYKE 459
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1,
NPPSFA, national project protein structural and
functional analyses; HET: GSH; 1.40A {Mus musculus} PDB:
2cz3_A 1fw1_A*
Length = 223
Score = 166 bits (422), Expect = 8e-47
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 13/183 (7%)
Query: 1 MDFEIRDIDLFNK-----PDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQL 55
+D+EI I+L + +NP QVP L + + +S I EY++E P P+L
Sbjct: 36 IDYEIVPINLIKDGGQQFTEEFQTLNPMKQVPALKIDGITIVQSLAIMEYLEETRPIPRL 95
Query: 56 MSSDPLMRARARLMLLNFEKEI--FIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPL 113
+ DP RA R++ I +L +L+ + + A++ I L +
Sbjct: 96 LPQDPQKRAIVRMISDLIASGIQPLQNLSVLKQVGQE---NQMQWAQKVITSGFNALEKI 152
Query: 114 F--LKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLT 171
KY +GDE SM DV + P + + + ++LS + + + + + + S
Sbjct: 153 LQSTAGKYCVGDEVSMADVCLVPQVANAERFKVDLSPYPT-ISHINKELLALEVFQVSHP 211
Query: 172 PAE 174
+
Sbjct: 212 RRQ 214
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans
serovar lai} PDB: 3ubl_A*
Length = 242
Score = 164 bits (417), Expect = 5e-46
Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 8/185 (4%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFP-YPQLMSSD 59
+++E I ++ ++ +++P G++P+L ++ES I E++D FP P+L+ D
Sbjct: 27 LEYEQIRIAP-SQEEDFLKISPMGKIPVLEMDGKFIFESGAILEFLDTIFPQTPKLIPED 85
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
P AR R + E + I + K S + + + + L + + Y
Sbjct: 86 PWEAARVREISTIIETYLDIPARRIYLPAAKVSPEIVEEVHSTLVKGIKALQRVVRFSPY 145
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP------LIKYAERIFSRPSYMESLTPA 173
+ G+ F++ D L LD + P +Y + ++
Sbjct: 146 IAGNVFTLADCSGFAHLSVLDEELRPFYPNNHPLDLLNGWKEYFVFMKTKAGPALVEKDK 205
Query: 174 EKIMQ 178
+ + +
Sbjct: 206 QILKK 210
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride
intracellular channels, CLIC2, pore-forming protein
ryanodine receptor, chloride channel; HET: GSH; 1.85A
{Homo sapiens} PDB: 2r5g_A 2per_A*
Length = 247
Score = 163 bits (415), Expect = 1e-45
Identities = 31/195 (15%), Positives = 71/195 (36%), Gaps = 17/195 (8%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ F + +D+ KP+ + + P P LV + + I E++++ P+ P
Sbjct: 45 VKFNVTTVDMTRKPEELKDLAPGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSP 104
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRL-----------IT 109
+ + F K ++ + E NK K + + + D L
Sbjct: 105 KYKESFDVGCNLFAK-FSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSA 163
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD-----YYGINLSKSASPLIKYAERIFSRP 164
P + ++ GD+ ++ D + P L + Y ++ S + +Y ++R
Sbjct: 164 EEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYARE 223
Query: 165 SYMESLTPAEKIMQA 179
+ + ++I
Sbjct: 224 EFTHTCPEDKEIENT 238
>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione;
HET: GSH; 1.05A {Escherichia coli}
Length = 202
Score = 162 bits (411), Expect = 1e-45
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLMSSD 59
+ FE + +N + + + NP G+VP+LV + ++S II EYI+ P ++ D
Sbjct: 24 ITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRD 83
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENER---NKTSIKGYKRAREEIRDRLITLAPLFLK 116
PL R R + + + L + + + S R RE+I L L +L
Sbjct: 84 PLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEG-YLV 142
Query: 117 NKYMLGDEFSMLDVVIAPLLWRLDYYG--INLSKSASPLIKYAERIFSRPSYMESLTPA 173
+ + D ++ + IA + L++ L+K E +FSR S+ + P
Sbjct: 143 DGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPK 201
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology
modeling,de novo modeling,ribos proteins,novel ribosomal
proteins, ribosome; 5.50A {Triticum aestivum}
Length = 305
Score = 164 bits (417), Expect = 2e-45
Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 62/262 (23%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIYQLGFSKG 232
+ ++ A VH G + + +M Y++ R + I+IINL KT + A R I + +
Sbjct: 20 QMMLAADVHLGTKN--CDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIE-NPQ 76
Query: 233 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 292
++ + + + A G I R G TN
Sbjct: 77 DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTN---------------------- 114
Query: 293 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 352
++ P + + D + E+ NIP I
Sbjct: 115 ------------------------QLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIA 150
Query: 353 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIM------ 406
DT+ ++ IP N+ +SI + L + G + +M
Sbjct: 151 FCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMR--GTILPGHKWDVMVDLFFY 208
Query: 407 ----ECKKALIEANGKLSKAEE 424
E K+ E ++
Sbjct: 209 RDPEEAKEQEEEEAALVAPDYG 230
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1;
glutathione-S-tranferase superfamily, chloride ION
channel, metal transport; 1.40A {Homo sapiens} SCOP:
a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A
3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Length = 241
Score = 161 bits (409), Expect = 5e-45
Identities = 33/194 (17%), Positives = 75/194 (38%), Gaps = 15/194 (7%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFP---YPQLMS 57
+ F + +D + + + ++ P G++P L+ + ++N I E+++ YP+L +
Sbjct: 39 VTFNVTTVDTKRRTETVQKLCPGGELPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAA 98
Query: 58 SDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIR-------DRLITL 110
+P + F I L + K +K K + D
Sbjct: 99 LNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEGVDETSAE 158
Query: 111 APLFLKNKYMLGDEFSMLDVVIAPLLWRLD-----YYGINLSKSASPLIKYAERIFSRPS 165
+ K++ G+E ++ D + P L + Y G + ++ + +Y ++R
Sbjct: 159 DEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREE 218
Query: 166 YMESLTPAEKIMQA 179
+ + E+I A
Sbjct: 219 FASTCPDDEEIELA 232
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein,
acetylation, cytoplasm, phosphorylation, polymorphism;
2.15A {Homo sapiens}
Length = 253
Score = 159 bits (404), Expect = 4e-44
Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 50/220 (22%)
Query: 174 EKIMQAGVHFGHQTRFWNPKMSSYIFGHR-NKIHIINLEKTLYMYEKAIRYIYQLGFSKG 232
K + AG H G + +M YI+ + + I+IINL++T A R I + +
Sbjct: 49 LKFLAAGTHLGGTN--LDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIE-NPA 105
Query: 233 TLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGS 292
+ + ++ + + A G I R+ G TN
Sbjct: 106 DVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQ--------------------- 144
Query: 293 IRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIG 352
I+ P + + D ++EA +N+P I
Sbjct: 145 -------------------------IQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIA 179
Query: 353 VVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 392
+ +T+ ++ IP N+ A S+ L + L +
Sbjct: 180 LCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMR 219
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant,
TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP:
a.45.1.1 c.47.1.5
Length = 230
Score = 153 bits (389), Expect = 2e-42
Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 10/188 (5%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNP-YGQVPILVERDLILYESNIINEYIDERFP--YPQLMS 57
+ +E + DL+ K + + + NP + ++P+L+ + ES II +YIDE F P L+
Sbjct: 30 LSYEDVEEDLYKKSELLLKSNPVHKKIPVLIHNGAPVCESMIILQYIDEVFASTGPSLLP 89
Query: 58 SDPLMRARARLMLLNFEKEIFIHLY-MLENERNKTSIKGYKRAREEIRDRLITLAPLFLK 116
+DP RA AR + + ++ L + + +G K+A + L
Sbjct: 90 ADPYERAIARFWVAYVDDKLVAPWRQWLRGKTEEEKSEGKKQAFAAVGVLEGALRECSKG 149
Query: 117 NKYMLGDEFSMLDVVIAPLLWRLDYYGIN-----LSKSASP-LIKYAERIFSRPSYMESL 170
+ GD ++DV + +L + + +P L + ER + +L
Sbjct: 150 GGFFGGDGVGLVDVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAAL 209
Query: 171 TPAEKIMQ 178
++++
Sbjct: 210 PDVGRLLE 217
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC,
chloride channel, ION transport, ionic channel, nucleus,
transport, gated channel; 1.95A {Homo sapiens} PDB:
3kjy_A
Length = 250
Score = 152 bits (384), Expect = 2e-41
Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 15/193 (7%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ F + +D PD + P Q+PIL+ ++ I ++++E P S P
Sbjct: 57 VPFTLTTVDTRRSPDVLKDFAPGSQLPILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAP 116
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFL----- 115
R F K + +++ + RA + L L
Sbjct: 117 RYRESNTAGNDVFHK-FSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHELAGEPQ 175
Query: 116 ----KNKYMLGDEFSMLDVVIAPLLWRLD-----YYGINLSKSASPLIKYAERIFSRPSY 166
+ +++ GD ++ D + P L +D + + + +Y + +
Sbjct: 176 LRESRRRFLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEF 235
Query: 167 MESLTPAEKIMQA 179
+ + +I+ A
Sbjct: 236 KYTCPHSAEILAA 248
>3lhp_S 4E10_D0_1ISEA_004_N (T93); epitope-scaffold, immune system; 2.70A
{Artificial gene} PDB: 1y69_8
Length = 123
Score = 147 bits (373), Expect = 2e-41
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 890 HTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITE 949
H SI K+ + KA+ L+ + P T+ER ++ +K+++ E
Sbjct: 5 HHGSISDIRKDAEVRMDKAVEAFKNKLDKF--KAAVRKVFP--TEERIKDWLKIVRGEAE 60
Query: 950 ETKISIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEI 1009
+ ++++R + RD+N+ L K+K ++ + ++ +D+QKLTD I +I L + E +
Sbjct: 61 QARVAVRNVGRDANDKAAALGKDKEINWFDISQSLWDVQKLTDAAIKKIEAALADMEAWL 120
Query: 1010 L 1010
Sbjct: 121 T 121
>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH;
1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5
Length = 231
Score = 151 bits (382), Expect = 2e-41
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNP-YGQVPILVERDLILYESNIINEYIDERFP-------- 51
++FE R+ DL NK D + R NP + ++P+L+ + ES +I +Y+D+ FP
Sbjct: 30 LEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPP 89
Query: 52 YPQLMSSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLA 111
+ RA AR +++++ L + + A E+ + L TL
Sbjct: 90 ANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAA----AGREMAEILRTLE 145
Query: 112 PLFLKNKYML---GDEFSMLDVVIAPLLWRLDYY----GINLSKSASPLIKYAERIFSRP 164
++ G +DV + P Y G ++ + A L +A R
Sbjct: 146 AELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRID 205
Query: 165 SYMESLTPAEKIM 177
S ++ L EK+
Sbjct: 206 SVVKHLPSPEKVY 218
>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid,
bacterial, biodegradation, fumaryl pyruvate; HET: TGG;
1.3A {Ralstonia SP} PDB: 2jl4_A*
Length = 214
Score = 147 bits (374), Expect = 1e-40
Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 15/183 (8%)
Query: 1 MDFEIRDIDLFN---KPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMS 57
+ +E + L D +NP VP L +L +S I E+++E++P P L+
Sbjct: 26 VPYEYLAVHLGKEEHLKDAFKALNPQQLVPALDTGAQVLIQSPAIIEWLEEQYPTPALLP 85
Query: 58 SDPLMRARARLMLLNFEKEIF-----IHLYMLENERNKTSIKGYKRAREEIRDRLITLAP 112
+D R R R + +I L L I
Sbjct: 86 ADADGRQRVRALAAIVGCDIHPINNRRILEYLRKTFGADEAAINAWCGTWISAGFDAYEA 145
Query: 113 LF----LKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLI-KYAERIFSRPSYM 167
L + +Y GD ++ D + P + + ++L+ PLI ++
Sbjct: 146 LLAVDPKRGRYSFGDTPTLADCYLVPQVESARRFQVDLTP--YPLIRAVDAACGELDAFR 203
Query: 168 ESL 170
+
Sbjct: 204 RAA 206
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula
elliptica} PDB: 3qaw_A*
Length = 243
Score = 143 bits (363), Expect = 1e-38
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 1 MDFEIRDIDLF---NKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMS 57
+D++ + I +K + I +NP GQVP + D+++ ES I Y++E++P L
Sbjct: 50 IDYDEKIISFSKKEHKSEEILELNPRGQVPTFTDGDVVVNESTAICMYLEEKYPKVPLFP 109
Query: 58 SDPLMRARARLMLL---NFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLF 114
SD +RA+ + N + + ++ K +++ L
Sbjct: 110 SDTTIRAKVYQRMFETSNISTNVMEFVQYKMKNKDSIDQVLLKEKKDKAHVELGHWENYL 169
Query: 115 LKN-KYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTP 172
+ ++ EF+M DV P++ + G NL S + KY + RP+ ++++ P
Sbjct: 170 KQTGGFVATKEFTMADVFFFPMVALIVRQGANLKDSYPNIFKYYNMMMDRPTIVKTMPP 228
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A
{Artificial gene}
Length = 121
Score = 135 bits (343), Expect = 1e-37
Identities = 33/118 (27%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 894 IQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKI 953
I +K+ + K++ L+ G T+ERR+++VK+++ E ++
Sbjct: 2 INEIKKDAQERMDKSVEALKNNLSKVRTGG-------GGTEERRKDLVKIVRGEAEGGRV 54
Query: 954 SIRKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEILT 1011
++R I RD+ +L L K+K ++ + +A ++IQKLTD + +I+++L KEKE++
Sbjct: 55 AVRNIARDAANDLAALGKDKEVNWFDISQALWEIQKLTDVAVKKIDEVLAAKEKELME 112
>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein
structure initiative, NE SGX research center for
structural genomics; 2.30A {Legionella pneumophila
subsp}
Length = 222
Score = 131 bits (332), Expect = 8e-35
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 17/185 (9%)
Query: 1 MDFEIRDIDLFNKPDNIF-----RMNPYGQVPILVERDLILYESNIINEYIDERFPYPQL 55
+ +E ++ L N ++NP VP L IL +S I +Y++E P L
Sbjct: 26 IAYEKIEVHLVNNGGEQHSLQYHQINPQELVPSLDINGQILSQSMAIIDYLEEIHPEMPL 85
Query: 56 MSSDPLMRARARLMLLNFEKEIF-----IHLYMLENERNKTSIKGYKRAREEIRDRLIT- 109
+ DP M+A + M L ++ L L+ + N + + ++
Sbjct: 86 LPKDPFMKATLKSMALIVACDMHPLNNLRVLNRLKEQFNANEEQVLEWYHHWLKTGFDAF 145
Query: 110 ---LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLI-KYAERIFSRPS 165
L L G E + DV + P ++ + +++ P+I + E + P+
Sbjct: 146 EEKLGALERDKPVCFGSEVGLADVCLIPQVYNAHRFHFDMAS--YPIINEINEYCLTLPA 203
Query: 166 YMESL 170
+ ++
Sbjct: 204 FHDAA 208
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP:
a.45.1.1 c.47.1.5
Length = 221
Score = 125 bits (316), Expect = 1e-32
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 1 MDFEIRDIDLFNK----PDNIFR-MNPYGQVPILVERDLILYESNIINEYIDERFPYPQL 55
+D+E ++L D F+ +NP G VP LV+ D+++ +S I Y+DE++P P L
Sbjct: 32 LDYEYIPVNLLKGDQFDSD--FKKINPMGTVPALVDGDVVINDSFAIIMYLDEKYPEPPL 89
Query: 56 MSSDPLMRARARLMLLNFEKEIF------IHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
+ D RA + I + Y+ E + I
Sbjct: 90 LPRDLHKRAVNYQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKT---AWVNNAITKGFTA 146
Query: 110 LAPLF--LKNKYMLGDEFSMLDVVIAPLLWRL-DYYGINLSKSASPLIK-YAERIFSRPS 165
L L K+ GDE + D+ +AP + + + IN+ P + E P+
Sbjct: 147 LEKLLVNCAGKHATGDEIYLADLFLAPQIHGAINRFQINMEP--YPTLAKCYESYNELPA 204
Query: 166 YMESLTPAE 174
+ +L +
Sbjct: 205 FQNALPEKQ 213
>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold,
metal transport; 1.70A {Drosophila melanogaster}
Length = 260
Score = 125 bits (315), Expect = 3e-32
Identities = 25/184 (13%), Positives = 61/184 (33%), Gaps = 17/184 (9%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
+ ++ +D+ P + PIL++ L + E+ I +I + P +
Sbjct: 59 ISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENEKIERHIMKNIPGGYNLFVQD 118
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYM 120
A L K L + +N + ++ + + R +++
Sbjct: 119 KEVATLIENLYVKLKL---MLVKKDEAKNNALLSHLRKINDHLSAR---------NTRFL 166
Query: 121 LGDEFSMLDVVIAPLLWRLD-----YYGINLSKSASPLIKYAERIFSRPSYMESLTPAEK 175
GD D + P L + + + + L +Y ++ ++ +S +
Sbjct: 167 TGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQD 226
Query: 176 IMQA 179
I+
Sbjct: 227 IINH 230
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione,
structural genomics, protein structure initiative; HET:
GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Length = 213
Score = 120 bits (302), Expect = 7e-31
Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 14/185 (7%)
Query: 2 DFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERF-PYPQLMSSD 59
FE + +F+ + +NP + P LV +L +S++I +Y++ P LM +
Sbjct: 27 PFEHHSLSVFSTFEQFKAINPVVKAPTLVCEGGEVLMDSSLIIDYLETLAGPQRSLMPTA 86
Query: 60 PLMRARAR----LMLLNFEKE---IFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAP 112
R R L L EK ++ +++ + +R +++ L
Sbjct: 87 LPQRLRELRLVGLALAACEKSVQIVYERNLRPAEKQHGPWL---ERVGGQLQAAYGELEQ 143
Query: 113 LFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLS-KSASP-LIKYAERIFSRPSYMESL 170
K + +A + P + +AE P ++ +
Sbjct: 144 ELQKQPLPRDGSLGQAGISLAVAWSFSQMMVADQFNPGQFPAVRGFAEYAEQLPVFLATP 203
Query: 171 TPAEK 175
Sbjct: 204 ATEGH 208
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding,
complex of two elongation factors; 3.00A {Thermus
thermophilus} SCOP: a.5.2.2 d.43.1.1
Length = 196
Score = 113 bits (284), Expect = 1e-28
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 391 AKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIY 450
+ + +LR T A +M+ K+AL +A KA ++LR + K ++R A++G+I Y
Sbjct: 4 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHY 63
Query: 451 ISE--KVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP--INLDQLNNLKIKN--N 504
I +VG LVE+NCETDFVA+N F +K +A I P ++ +++ +++
Sbjct: 64 IHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQ 123
Query: 505 LLTVDEKCKELISRIGENIKIRRFKLFKTNNNLIS--YLHDNKIGV 548
+ + +I E I R K + L+ ++ D+K+ V
Sbjct: 124 IYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKV 169
Score = 83.6 bits (207), Expect = 2e-18
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 510 EKCKELISRIGENIKIRRFKLFKTNNNLISYLH-DNKIGVIVEYNGDNESA--------- 559
EK +L+ G ++ + Y+H + ++GV+VE N + +
Sbjct: 33 EKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNL 92
Query: 560 VKDVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLG 600
KD+AMHIA M P +S+++IP + +EKE + + A G
Sbjct: 93 AKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALNEG 133
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA
polymerase, translation, transferase-RNA complex; HET:
GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A*
3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G*
1efu_B
Length = 1289
Score = 115 bits (290), Expect = 3e-26
Identities = 82/219 (37%), Positives = 120/219 (54%), Gaps = 17/219 (7%)
Query: 387 AFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILR----IKLGKKILNISNRNA 442
A + A V ELR +T A +M+CKKAL EANG + A E +R IK KK N+ A
Sbjct: 2 AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNV----A 57
Query: 443 KDGVIAIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPINLDQLNNLKIK 502
DGVI I G ++E+NC+TDFVAK+ F F+ K+ +++ L
Sbjct: 58 ADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLK----- 112
Query: 503 NNLLTVDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKD 562
+E+ L+++IGENI IRR + + L SY H +IGV+V G +E VK
Sbjct: 113 ---AQFEEERVALVAKIGENINIRRVAALE-GDVLGSYQHGARIGVLVAAKGADEELVKH 168
Query: 563 VAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 601
+AMH+AA KP + + + +++EKEY + + A Q G+
Sbjct: 169 IAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGK 207
>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase,
transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae}
PDB: 3erf_A* 3erg_A*
Length = 233
Score = 106 bits (267), Expect = 4e-26
Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 13/179 (7%)
Query: 1 MDFEIRDIDLF---NKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLM 56
+ I+L+ +K N G VP+L D ++ E I EYID P L
Sbjct: 44 SSVQFVRINLWKGEHKKPEFLAKNYSGTVPVLELDDGTLIAECTAITEYIDALDGTPTLT 103
Query: 57 SSDPLMRARARLMLLNFEKEIF---------IHLYMLENERNKTSIKGYKRAREEIRDRL 107
PL + +M E E+ + + + R R++ +
Sbjct: 104 GKTPLEKGVIHMMNKRAELELLDPVSVYFHHATPGLGPEVELYQNKEWGLRQRDKALHGM 163
Query: 108 ITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSY 166
+ + Y+ GD FSM D+ + L + + + L + +R+ RPS
Sbjct: 164 HYFDTVLRERPYVAGDSFSMADITVIAGLIFAAIVKLQVPEECEALRAWYKRMQQRPSV 222
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding,
transferase, methanocald jannaschii, isopentenyl
monophosphate; 2.05A {Methanocaldococcus jannaschii}
PDB: 3k4y_A* 3k52_A* 3k56_A*
Length = 266
Score = 106 bits (267), Expect = 1e-25
Identities = 48/250 (19%), Positives = 88/250 (35%), Gaps = 30/250 (12%)
Query: 600 GEALM-KGDAYNINSSIIKNIISEISEIVSC------GIELAIVIGGGNICRGISNKIQN 652
G L K Y+I ++ I EI + I+L +V GGG ++ K
Sbjct: 15 GSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGAFGHPVAKKYLK 74
Query: 653 IDRSTADYMGMLATI---------INSLALFDILNKSGIISHVMSAISIEKFLESYIPLN 703
I+ ++ M N++ + + + + + + + +
Sbjct: 75 IEDGKKIFINMEKGFWEIQRAMRRFNNIIIDTLQSYDIPAVSIQPSSFVVFGDKLIFDTS 134
Query: 704 AIKYLEEGKVV-------IFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSD 756
AIK + + +V + G + D A E+KA++IL AT VDG+ +
Sbjct: 135 AIKEMLKRNLVPVIHGDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDN 194
Query: 757 PNKCLSAIIYKKITFDEVISKKLEIMDSTA-----FSFCRDQKLPIRVFSIIKSGALKRV 811
+ I I +D T R K VF+ K+ + +
Sbjct: 195 KP--IKRIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKCRGFVFNGNKANNIYKA 252
Query: 812 IEGKNEGTLV 821
+ G+ EGT +
Sbjct: 253 LLGEVEGTEI 262
>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC,
GST fold, metal transport; 1.60A {Caenorhabditis
elegans}
Length = 291
Score = 106 bits (264), Expect = 3e-25
Identities = 30/194 (15%), Positives = 76/194 (39%), Gaps = 17/194 (8%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVE--RDLILYESNIINEYID--ERFPYPQLM 56
E++ +++ ++ + Q PI++E ++L ++ I I + L
Sbjct: 56 ARVEVKTVNVNSEAF--KKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLF 113
Query: 57 SSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKG----YKRAREEIRDRLITLAP 112
DP R + NF+ + + + ++ + ++ K + ++L +
Sbjct: 114 EKDPSAEKRIENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNIDQ 173
Query: 113 LF--LKNKYMLGDEFSMLDVVIAPLLWRLD-----YYGINLSKSASPLIKYAERIFSRPS 165
L K++Y+LG+ + D + P L + G ++ + + L Y + +
Sbjct: 174 LLSERKSRYLLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAA 233
Query: 166 YMESLTPAEKIMQA 179
++ES + I+
Sbjct: 234 FIESCPADQDIIHH 247
>1wih_A Mitochondrial ribosome recycling factor; structural genomics, riken
structural genomics/proteomics initiative, RSGI, unknown
function; NMR {Mus musculus} SCOP: d.67.3.1
Length = 84
Score = 93.9 bits (234), Expect = 2e-23
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 857 GRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINEANLG 915
G + LD+I V + L +I I++ + I + E ++ KAI E+ +
Sbjct: 1 GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRESGMN 60
Query: 916 LNPTIQGNIIYVSIPPLTKERRE 938
LNP ++G +I V IP +T
Sbjct: 61 LNPEVEGTLIRVPIPKVTSGPSS 83
>2dsa_A Glutathione S-transferase; HET: GSH HPX; 2.10A {Burkholderia
xenovorans} PDB: 2gdr_A*
Length = 203
Score = 96.5 bits (241), Expect = 8e-23
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVPILV-ERDLILYESNIINEYIDERFPYPQ 54
+FE+ +DL +K D + +NP G VP L + L E I +Y+ ++ P Q
Sbjct: 24 NFELVQVDLASKKTASGQD--YLEVNPAGYVPCLQLDDGRTLTEGPAIVQYVADQVPGKQ 81
Query: 55 LM-SSDPLMRARARLMLLNF-EKEI---FIHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
L ++ R LNF E+ F L+ +S + R+ + RL
Sbjct: 82 LAPANGSFERYHL-QQWLNFISSELHKSFSPLFNPA-----SSDEWKNAVRQSLNTRLGQ 135
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIK-YAERIFSRPSYME 168
+A Y+LGD+ S+ D+ + +L Y I+L S P ++ + R+ R +
Sbjct: 136 VARQLEHAPYLLGDQLSVADIYLFVVLGWSAYVNIDL--SPWPSLQAFQGRVGGREAVQS 193
Query: 169 SLTPAEKIMQ 178
+L AE +++
Sbjct: 194 ALR-AEGLIK 202
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A
{Xylella fastidiosa}
Length = 207
Score = 93.0 bits (232), Expect = 1e-21
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 18/188 (9%)
Query: 2 DFEIRDIDLF--NKPDNIFR-MNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSS 58
F+++ +D P+ + +NP G VP L D +L ++ I YI + P + +S
Sbjct: 26 SFDLQFLDHQSMKAPE--YLALNPSGAVPALQVGDWVLTQNAAILNYITDIAPAERGLSG 83
Query: 59 DPLMRARARLM-LLNFE--------KEIFIHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
D ++ARA + + F +F L++ + + AR+++R
Sbjct: 84 DGSLKARAEINRWIAFSNSDVHPMYWALFGGTAYLQDPQMIARSQ--DNARQKLRVLYQR 141
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMES 169
+ ++ + S D + L G++LS + L + ER+ + P +
Sbjct: 142 ADAHLKHHNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDA-LSAFFERMEADPGVQAA 200
Query: 170 LTPAEKIM 177
L AE ++
Sbjct: 201 LQ-AEGLI 207
>2pvq_A Glutathione S-transferase; xenobiotics detoxification, H-site; HET:
GSH; 1.80A {Ochrobactrum anthropi} PDB: 2nto_A*
Length = 201
Score = 91.5 bits (228), Expect = 5e-21
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVP-ILVERDLILYESNIINEYIDERFPYPQ 54
+E+ +DL K D + +NP G VP + V+ ++ ++ I +YI +
Sbjct: 24 PYELEAVDLKAKKTADGGD--YFAVNPRGAVPALEVKPGTVITQNAAILQYIGDHSDVAA 81
Query: 55 LM-SSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITL-AP 112
+ + RAR L F ++ L + I RL L A
Sbjct: 82 FKPAYGSIERARL-QEALGFCSDLHAAFSGLFAPNLSEEAR--AGVIANINRRLGQLEAM 138
Query: 113 LFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESL 170
L KN Y LGD+F+ D + ++ ++L SA P +K ER+ +RP+ ++
Sbjct: 139 LSDKNAYWLGDDFTQPDAYASVIIGWGVGQKLDL--SAYPKALKLRERVLARPNVQKAF 195
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX;
2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5
PDB: 1bx9_A*
Length = 211
Score = 90.8 bits (226), Expect = 8e-21
Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 20/183 (10%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFP--YPQ 54
DFE+ ++L + K F NP+GQVP + DL L+ES I +YI R+
Sbjct: 27 DFELVHVELKDGEHKKEP--FLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTN 84
Query: 55 LMSSDPLMRARARLML--LNFE--------KEIFIHLYMLENERNKTSIKGYKRAREEIR 104
L+ +D ++ +M + E ++ T ++
Sbjct: 85 LLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLA 144
Query: 105 DRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIK-YAERIFSR 163
L + KY+ G+ F++ D+ P + L + P + + I R
Sbjct: 145 KVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKR 204
Query: 164 PSY 166
P+
Sbjct: 205 PAS 207
>1pmt_A PMGST, GST B1-1, glutathione transferase; glutathione-conjugating,
A putative oxidoreduct; HET: GSH; 2.50A {Proteus
mirabilis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pmt_A*
Length = 203
Score = 89.6 bits (223), Expect = 2e-20
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 16/186 (8%)
Query: 2 DFEIRDIDL-----FNKPDNIFR-MNPYGQVPILV-ERDLILYESNIINEYIDERFPYPQ 54
DF I IDL + D F +NP GQVP+L + IL E I +Y+ + P
Sbjct: 24 DFSIERIDLRTKKTESGKD--FLAINPKGQVPVLQLDNGDILTEGVAIVQYLADLKPDRN 81
Query: 55 L-MSSDPLMRARARLMLLNF-EKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAP 112
L L R + LNF E+ L + S + +++ + + +
Sbjct: 82 LIAPPKALERYHQ-IEWLNFLASEVHKGYSPLFSSDTPESYL--PVVKNKLKSKFVYIND 138
Query: 113 LFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESLTP 172
+ K K + GD F++ D + L + ++L+ + L Y RI RP+ +L
Sbjct: 139 VLSKQKCVCGDHFTVADAYLFTLSQWAPHVALDLTDLSH-LQDYLARIAQRPNVHSALV- 196
Query: 173 AEKIMQ 178
E +++
Sbjct: 197 TEGLIK 202
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification,
transferase-transfera inhibitor complex; HET: GGL CYW;
2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Length = 209
Score = 88.4 bits (220), Expect = 5e-20
Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 23/182 (12%)
Query: 2 DFEIRDIDLFN----KPDNIFR-MNPYGQVPILVERDLILYESNIINEYIDERFPYPQLM 56
D+EI I+ P+ NP+GQVP L + DL L+ES I +Y + L
Sbjct: 27 DYEIVPINFATAEHKSPE--HLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKPELLR 84
Query: 57 SSDPLMRARARLMLLNFEKEIF-----------IHLYMLENERNKTSIKGYKRAREEIRD 105
+ A + + E + + ML ++ + E+++
Sbjct: 85 EGNLEEAAMV-DVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVV---DENLEKLKK 140
Query: 106 RLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRP 164
L K KY+ GD S+ D+ + L A P + + + RP
Sbjct: 141 VLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERP 200
Query: 165 SY 166
S
Sbjct: 201 SV 202
>1n2a_A Glutathione S-transferase; HET: GTS; 1.90A {Escherichia coli} SCOP:
a.45.1.1 c.47.1.5 PDB: 1a0f_A*
Length = 201
Score = 88.1 bits (219), Expect = 7e-20
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVPILVERD-LILYESNIINEYIDERFPYPQ 54
DF + +DL K D + +NP GQVP L+ D +L E I +Y+ + P Q
Sbjct: 24 DFTLVSVDLMKKRLENGDD--YFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQ 81
Query: 55 LM-SSDPLMRARARLMLLNF-EKEI---FIHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
L+ + + R + + LN+ E+ F L+ R T + R ++ +L
Sbjct: 82 LLAPVNSISRYKT-IEWLNYIATELHKGFTPLF-----RPDTPEEYKPTVRAQLEKKLQY 135
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMES 169
+ ++ G F++ D + +L +NL + + +R+ RP ++
Sbjct: 136 VNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEH-IAAFMQRMAERPEVQDA 194
Query: 170 L 170
L
Sbjct: 195 L 195
>3uar_A Glutathione S-transferase; GSH binding site; HET: GSH; 2.60A
{Methylococcus capsulatus} PDB: 3uap_A*
Length = 227
Score = 88.1 bits (219), Expect = 9e-20
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVP-ILVERDLILYESNIINEYIDERFPYPQ 54
DFE+ ++DL K D F +NP G VP + ++ +L E +I +Y+ + P
Sbjct: 26 DFELENVDLGTKKTGSGAD--FLQVNPKGYVPALQLDDGQVLTEDQVILQYLADLKPESG 83
Query: 55 LM-SSDPLMRARAR--LMLLN--FEKEIFIHLYMLENERNKTSIKGYK-RAREEIRDRLI 108
LM S R R L ++ K F + N S + K A + RL
Sbjct: 84 LMPPSGTFERYRLLEWLAFISTEIHK-TFGPFW------NPESPEASKQIALGLLSRRLD 136
Query: 109 TL-APLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYM 167
+ L +++GD +S+ D ++ +L +Y I+LSK ++ Y ER +RP+
Sbjct: 137 YVEDRLEAGGPWLMGDRYSVADAYLSTVLGWCEYLKIDLSKWPR-ILAYLERNQARPAVQ 195
Query: 168 -----ESLTPAEKIMQAGVHFGHQ 186
E L AE + H H
Sbjct: 196 AAMKAEGLIQAENLYFQSHHHHHH 219
>4g9h_A Glutathione S-transferase; GST, enzyme function initiative,
structural genomics; HET: GSH; 2.10A {Yersinia pestis}
Length = 211
Score = 87.3 bits (217), Expect = 2e-19
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVPILVERD-LILYESNIINEYIDERFPYPQ 54
DF I +DL K D + +NP GQVP LV D +L E I +Y+ ++ P
Sbjct: 27 DFSIERVDLVTKKTETGAD--YLSINPKGQVPALVLDDGSLLTEGVAIVQYLADKVPDRH 84
Query: 55 L-MSSDPLMRARARLMLLNF-EKEI---FIHLYMLENERNKTSIKGYK-RAREEIRDRLI 108
L S L R A + LNF E+ F L+ N + YK RE + +
Sbjct: 85 LIAPSGTLSRYHA-IEWLNFIATELHKGFSPLF------NPNTPDEYKTIVRERLDKQFS 137
Query: 109 TLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYME 168
+ + ++ Y+LG +FS+ D + + + + + + + L +Y R+ RP+
Sbjct: 138 YVDSVLAEHDYLLGKKFSVADAYLFTVSRWANALNLQIKERSH-LDQYMARVAERPAVKA 196
Query: 169 SLTPAEKIMQAGVHF 183
+L AE I ++F
Sbjct: 197 ALA-AEDIKAENLYF 210
>3n5o_A Glutathione transferase; seattle structural genomics center for
infectious disease, S GST, pathogenic fungus,
coccidioidomycosis; HET: GSH; 1.85A {Coccidioides
immitis} PDB: 3lg6_A*
Length = 235
Score = 86.7 bits (215), Expect = 4e-19
Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 38/195 (19%)
Query: 1 MDFEIRDIDLFN----KPDNIFR-MNPYGQVPILVERD-----------LILYESNIINE 44
+ + ++L ++ +NP VP+LV + + +S E
Sbjct: 33 IPYTRHPVNLLKGEQHSDT--YKSLNPTNTVPLLVVSNINNTVSPSSASFSIGQSLAALE 90
Query: 45 YIDERFPYPQL----MSSDPLMRARARLMLLNFEKEIF------IHLYMLENERNKTSIK 94
Y++E P S+P+ RA R + ++ I + + +
Sbjct: 91 YLEEALPTNARPLLPPISNPVARAHVRTICNIIACDVQPVTNLKIQKKVKALDGDP---- 146
Query: 95 GYKRAREEIRDRLITLAPLF--LKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP 152
+R+ + L ++ +GDE ++ DV + P +W + G++L++ P
Sbjct: 147 -TVWSRDLATQGFGAVEKLLELSAGRFCVGDEITLADVCLVPAVWAAERVGMDLAR--FP 203
Query: 153 LIK-YAERIFSRPSY 166
+ K E + +
Sbjct: 204 ITKRVFEEMLKEEAV 218
>1f2e_A Glutathione S-transferase; GST complexed with glutathione,
thioredoxin superfamily fold transferase; HET: GSH;
2.30A {Sphingomonas paucimobilis} SCOP: a.45.1.1
c.47.1.5
Length = 201
Score = 85.7 bits (213), Expect = 4e-19
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 2 DFEIRDIDLFNK-----PDNIFR-MNPYGQVPILVERD-LILYESNIINEYIDERFPYPQ 54
DFE +DL + D F +NP G+VP L L E+ I YI ++ P
Sbjct: 24 DFEAVKVDLAVRKTEAGED--FLTVNPSGKVPALTLDSGETLTENPAILLYIADQNPASG 81
Query: 55 LMSSDPLMRARARLM-LLNF-EKEI---FIHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
L ++ R RL+ L+F E F+ L+ A E +++ L
Sbjct: 82 LAPAEG-SLDRYRLLSRLSFLGSEFHKAFVPLFAPATSDEAK-----AAAAESVKNHLAA 135
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMES 169
L + G+ FS+ D+ + +L Y GI+++ + L YA +I RP+ +
Sbjct: 136 LDKELAGRDHYAGNAFSVADIYLYVMLGWPAYVGIDMAAYPA-LGAYAGKIAQRPAVGAA 194
Query: 170 L 170
L
Sbjct: 195 L 195
>3lsz_A Glutathione S-transferase; xenobiotic, biodegradative metabolism,
PSI2, NYSGXRC, structural genomics, protein structure
initiative; HET: GSH; 1.70A {Rhodobacter sphaeroides}
Length = 225
Score = 85.5 bits (212), Expect = 9e-19
Identities = 40/189 (21%), Positives = 65/189 (34%), Gaps = 30/189 (15%)
Query: 2 DFEIRDIDLFNKPDNIF--------------RMNPYGQVPILVERDLILYESNIINEYID 47
FE + N+ + +NP GQ+P L E LIL ES I +I
Sbjct: 26 PFEHVPVIQANRVAHPHGPEAPLNTASAAYLAVNPLGQIPCLEEEGLILTESLAITLHIA 85
Query: 48 ERFPYPQLMSSDPLMRARAR---------LMLLNFEKEIFIHLYMLENERNKTSIKGYKR 98
QL A + E ++ + + +I
Sbjct: 86 RTQG-GQLGPRSEPEDALMVSWSLFAATAVEPPALEIQLIQRSGGGTSPEGQAAI---AI 141
Query: 99 AREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIK-YA 157
A E +R L L F Y++G F++ D+ +A L + L P + +
Sbjct: 142 AAERLRRPLARLERHFAAEDYLVGGRFTVADLNLAETLRYGQAHPALL--EPFPAVAAWL 199
Query: 158 ERIFSRPSY 166
+R SRP++
Sbjct: 200 DRCQSRPAF 208
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea
mays} SCOP: a.45.1.1 c.47.1.5
Length = 216
Score = 85.0 bits (211), Expect = 1e-18
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFP--YPQ 54
DFEI +DL +PD F +NP+GQ+P LV+ D +L+ES IN YI ++
Sbjct: 27 DFEIVPVDLTTGAHKQPD--FLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTD 84
Query: 55 LMSSDPLMRARAR-LMLLNFEKEIF-----------IHLYMLENERNKTSIKGYKRAREE 102
L+ + + A+ + L E F + +L + + + E+
Sbjct: 85 LLPATA---SAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVV---DKHAEQ 138
Query: 103 IRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIK-YAERIF 161
+ L +NKY+ GDEF++ D A L L +A P +K + E I
Sbjct: 139 LAKVLDVYEAHLARNKYLAGDEFTLADANHASYLLYLSKTPKAGLVAARPHVKAWWEAIV 198
Query: 162 SRPSY 166
+RP++
Sbjct: 199 ARPAF 203
>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*
Length = 244
Score = 84.7 bits (210), Expect = 3e-18
Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 18/192 (9%)
Query: 2 DFEIRDIDLFN----KPDNIFR-MNPYGQVPILVERDLILYESNIINEYIDERFPYP-QL 55
E+R +DL + F +N G++P L + D IL ES+ I Y+ ++ P
Sbjct: 27 PLELRTVDLVKGQHKSKE--FLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTPDHW 84
Query: 56 MSSDPLMRARARLMLLNFE--------KEIFIHLYMLENERNKTSIKGYKRAREEIRDRL 107
SD RAR L + + + + +R R + L
Sbjct: 85 YPSDLQARARV-HEYLGWHADCIRGTFGIPLWVQVLGPLIGVQVPEEKVERNRTAMDQAL 143
Query: 108 ITLAPLFL-KNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSY 166
L FL ++ G + ++ D++ L + G L + L + R+ +
Sbjct: 144 QWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALGYELFEGRPRLAAWRGRVEAFLGA 203
Query: 167 MESLTPAEKIMQ 178
I+
Sbjct: 204 ELCQEAHSIILS 215
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for
structural genomics of infectious diseases, csgid,
oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica
subsp} PDB: 1g7o_A
Length = 218
Score = 83.5 bits (206), Expect = 4e-18
Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 26/187 (13%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLMSSD 59
+ E+ + + RM VPIL + D L ES I Y+D P L
Sbjct: 27 IPVELNVL-QNDDEATPTRMIGQKMVPILQKDDSRYLPESMDIVHYVDNLDGKPLLTGKR 85
Query: 60 PLMRAR--------------ARLMLLNFE-------KEIFIHLYMLENERNKTSIKGYKR 98
R F+ ++ FI + +
Sbjct: 86 NPAIEEWLRKVNGYVNQLLLPRFAKSAFDEFSTPAARQYFIRKKEASSGSFDNHLAHSAG 145
Query: 99 AREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAE 158
++I D L L L + + E S D+ + PLL L + + + Y +
Sbjct: 146 LIKKIGDDLRLLDKL-IVQPNAVNGELSEDDIHLFPLLRNLTL--VAGIHWPTKVADYRD 202
Query: 159 RIFSRPS 165
+ +
Sbjct: 203 NMAKQTQ 209
>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification;
HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A
Length = 230
Score = 80.4 bits (199), Expect = 5e-17
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 1 MDFEIRDIDLF-NKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSD 59
+ +R + K + P+GQ+P + DLIL+ES I +I + + L+ D
Sbjct: 47 QPYHVRRLSFEAMKEASHLAYQPFGQIPSYEQGDLILFESGAIVMHIAQH--HSGLLPED 104
Query: 60 PLMRARAR-----------LMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLI 108
L RAR +LNF + L+ ++ + R +E++ RL
Sbjct: 105 QLRRARTVAWMFAALNTIEPSILNF---TTVWLFERNEPWHEARL---ARTKEQLLKRLD 158
Query: 109 TLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIK-YAERIFSRPSY 166
L+ +++ G FS D+++ +L RL+ GI + Y ER +RP++
Sbjct: 159 ELSAWLGDREWLEGS-FSAADILMICVLRRLESSGI---LKDYGNLLAYVERGKARPAF 213
>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase,
PSI, MCSG, structural genomics; 2.40A {Pseudomonas
syringae PV}
Length = 310
Score = 80.6 bits (198), Expect = 2e-16
Identities = 22/170 (12%), Positives = 44/170 (25%), Gaps = 27/170 (15%)
Query: 1 MDFEIRDIDLF-NKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSD 59
+++ I KPD Y + P+L I ++ ++ +++ P
Sbjct: 27 VNWRSVTIPSIMPKPDLTALTGGYRKTPVLQIGADIYCDTALMARRLEQEKASPAFYPQG 86
Query: 60 PLMRARA--------------------RLMLLNFEKEIFIHLYMLENERNKTSIKGY--- 96
M + F K +R+ G
Sbjct: 87 QEFAVAGLAAWADSVLFLHAVSLVFQPESMAVRFAKVPPDAAKAFIADRSMLFNGGTASR 146
Query: 97 ---KRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYG 143
++ + + + L L S+ D +A LW L
Sbjct: 147 PPVEQVKHQWPTFMSRLESQLSHGGDFLFGAPSIADFSVAHTLWFLKQTP 196
>2c3n_A Glutathione S-transferase theta 1; glutathione transferase,
polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A
Length = 247
Score = 77.4 bits (191), Expect = 8e-16
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 19/181 (10%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFPYP-QL 55
FE+R +DL F ++NP +VP L + D L ES I Y+ ++ P
Sbjct: 34 PFELRIVDLIKGQHLSDA--FAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYKVPDYW 91
Query: 56 MSSDPLMRARARLMLLNFE---------KEIFIHLYMLENERNKTSIKGYKRAREEIRDR 106
D RAR L ++ + ++ + S + E+
Sbjct: 92 YPQDLQARARV-DEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPVSPQTLAATLAELDVT 150
Query: 107 LITLAPLFLK-NKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPS 165
L L FL+ ++ G S+ D+V L G + + L + +R+ +
Sbjct: 151 LQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGAGCQVFEGRPKLATWRQRVEAAVG 210
Query: 166 Y 166
Sbjct: 211 E 211
>2uz8_A Eukaryotic translation elongation factor 1 epsilon-1; protein
biosynthesis, aminoacyl-tRNA synthetase, GST, nuclear
protein, RNA-binding protein; HET: MSE; 2.0A {Homo
sapiens}
Length = 174
Score = 72.1 bits (177), Expect = 1e-14
Identities = 25/187 (13%), Positives = 58/187 (31%), Gaps = 24/187 (12%)
Query: 2 DFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQLMSSDP 60
+ + + L N + Q+P+L + L I ++ ++ L+ S
Sbjct: 6 ELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLMGLTTIAAHLVKQANKEYLLGSTA 65
Query: 61 LMRARARLMLLNF-EKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKY 119
+A L + ++ ++ +I L+ L Y
Sbjct: 66 EEKAMV-QQWLEYRVTQVD-----------------GHSSKNDIHTLLMDLNSYLEDKVY 107
Query: 120 MLGDEFSMLDVVIAPLLWRLDYYGINLSKSASP-LIKYAERIFSRPSYMESLTP---AEK 175
+ G F++ D+++ L R K + ++ I P + L+ +
Sbjct: 108 LTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSVVFIKN 167
Query: 176 IMQAGVH 182
+ H
Sbjct: 168 RLYTNSH 174
>1tfe_A Elongation factor TS; 1.70A {Thermus thermophilus} SCOP: d.43.1.1
Length = 145
Score = 69.6 bits (171), Expect = 4e-14
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 539 SYLH-DNKIGVIVEYNGDN---------ESAVKDVAMHIAAMKPIALSSDQIPKKIIEKE 588
Y+H + ++GV+VE N + ++ KD+AMHIA M P +S+++IP + +EKE
Sbjct: 8 HYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKE 67
Query: 589 YSLAVLKAQQLG 600
+ + A G
Sbjct: 68 RQIYIQAALNEG 79
Score = 58.5 bits (142), Expect = 3e-10
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 48/139 (34%)
Query: 442 AKDGVIAIYI--SEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP--------- 490
A++G+I YI +++VG LVE+NCETDFVA+N F +K +A I P
Sbjct: 1 AREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIP 60
Query: 491 ---------INLDQLNN-------------------LK---------IKNNLLTVDEKCK 513
I + N L+ +K++ + V E +
Sbjct: 61 AEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQ 120
Query: 514 ELISRIGENIKIRRFKLFK 532
+ I++IGENI +RRF F+
Sbjct: 121 QAIAKIGENIVVRRFCRFE 139
>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A
{Bombyx mori}
Length = 216
Score = 70.7 bits (174), Expect = 7e-14
Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 16/189 (8%)
Query: 1 MDFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFPYP-Q 54
+ +I ++LF + F ++NP VP L + + +L+ES I Y+ +++ Q
Sbjct: 27 IPIQIEIVNLFKKEQLQES--FLKLNPQHCVPTLDDNNFVLWESRAIACYLADKYGKDDQ 84
Query: 55 LMSSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPL- 113
D RA L F + + G ++ ++D L +
Sbjct: 85 WYPKDLQKRAVV-NQRLYF--DSASLYVKIRAICFPILFLGETEIKQSLKDDLNSTLSFL 141
Query: 114 --FL-KNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESL 170
FL K K++ D ++ D I + + G ++S + + ++ + P E+
Sbjct: 142 NQFLEKTKWVAADHPTIADTSIYASMSSILAVGWDISSFPN-IQRWIKDCLLLPGAPENE 200
Query: 171 TPAEKIMQA 179
A A
Sbjct: 201 DGARTFGDA 209
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles
gambiae} PDB: 2il3_A* 2imk_A*
Length = 221
Score = 69.2 bits (170), Expect = 3e-13
Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 25/191 (13%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERF-PYPQL 55
+ E + I+L KP+ F ++NP +P+L + I+ ES+ I Y+ ++ L
Sbjct: 28 ELEQKTINLLTGDHLKPE--FVKLNPQHTIPVLDDNGTIITESHAIMIYLVTKYGKDDSL 85
Query: 56 MSSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPL-- 113
DP+ +AR L+FE + + + G E+ + + L
Sbjct: 86 YPKDPVKQARV-NSALHFESGVLFA--RMRFIFERILFFGKSDIPEDRVEYVQKSYELLE 142
Query: 114 -FLKNKYMLGDEFSMLDVVIAPLLWRL-DYYGINLSKSASPLIK-YAERIFSRPSYMESL 170
L + ++ G ++ D + + + SK P I + +R+ P Y
Sbjct: 143 DTLVDDFVAGPTMTIADFSCISTISSIMGVVPLEQSK--HPRIYAWIDRLKQLPYY---- 196
Query: 171 TPAEKIMQAGV 181
E+ G
Sbjct: 197 ---EEANGGGG 204
>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis,
GST-like, translation; 3.00A {Saccharomyces cerevisiae}
SCOP: a.45.1.1 c.47.1.5
Length = 219
Score = 69.0 bits (169), Expect = 3e-13
Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 23/192 (11%)
Query: 2 DFEIRDIDLFNKPDNIFRMNPYGQVPILVERD-LILYESNIINEYIDERFP----YPQLM 56
D ++ D + R P +VP V L E+ IN Y+ + QL+
Sbjct: 27 DVKVVTPD--AAAEQFARDFPLKKVPAFVGPKGYKLTEAMAINYYLVKLSQDDKMKTQLL 84
Query: 57 SSDPLMRARAR-LMLLNFEK-EIFIHLYML------ENERNKTSIKGYKRAREEIRDRLI 108
+D + A+A+ + + ++ I + NK K A + + +
Sbjct: 85 GADDDLNAQAQIIRWQSLANSDLCIQIANTIVPLKGGAPYNK---KSVDSAMDAVDKIVD 141
Query: 109 TLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSAS-P-LIKYAERIFSRPSY 166
Y+ + S+ D+V A + R A P ++++ + + P
Sbjct: 142 IFENRLKNYTYLATENISLADLVAASIFTRYFESLFGTEWRAQHPAIVRWFNTVRASPFL 201
Query: 167 ---MESLTPAEK 175
+ A+K
Sbjct: 202 KDEYKDFKFADK 213
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 69.1 bits (168), Expect = 6e-12
Identities = 107/670 (15%), Positives = 198/670 (29%), Gaps = 220/670 (32%)
Query: 2 DFEIRDI--------------DLFNKPDN---------IFRMNPYGQVPILVERDL---- 34
+F+ +D+ + D V VE L
Sbjct: 32 NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91
Query: 35 ------ILYESN----IINEYIDER---------FPYPQLMSSDPLMRARARLMLLNFEK 75
I E + YI++R F + P ++ R L+ L K
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK 151
Query: 76 EIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLF------LKNKYMLGDEFSMLD 129
+ I +L + KT + A + + F LKN ML
Sbjct: 152 NVLID-GVLGS--GKTWV-----ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML- 202
Query: 130 VVIAPLLWRLDYYGINLSKSASPLIKYAE-------RIFSRPSYMESLTPAEKIMQAGVH 182
LL+++D + S +S + R+ Y L ++ V
Sbjct: 203 ---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL-----LVLLNV- 253
Query: 183 FGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIY------QLGFSKG---T 233
N K + F KI + K + + A + + + +
Sbjct: 254 -------QNAKAWNA-FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 234 LL--FVGTK-----RQAR-------GVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQ 279
LL ++ + R+ +IA E++R G+ W N+K +
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIA-ESIRDGL----ATW-----DNWKHVNCD-- 353
Query: 280 RLKEMDLFITNGSIRKLSKKEALLFYRKQ-MKLNRVIGGIKNMNIIPDAIFIIDVGYHKG 338
+L I S+ L E YRK +L ++F
Sbjct: 354 KLTT----IIESSLNVLEPAE----YRKMFDRL---------------SVFPPSA----- 385
Query: 339 AVSEAIKLNIP--IIGVVDTNHSPDGINYVIPGNDDSAKSIAL-----YTKGIVDAFLDA 391
+IP ++ ++ + + V+ N S+ T I +L+
Sbjct: 386 --------HIPTILLSLIWFDVIKSDVMVVV--NKLHKYSLVEKQPKESTISIPSIYLEL 435
Query: 392 KTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIYI 451
K +L ++ +++++ I ++ D +I
Sbjct: 436 KV--KLENEY-----ALHRSIVDH----------YNIPKTFDSDDLI-PPYLDQYFYSHI 477
Query: 452 ---------SEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPIN-----LDQLN 497
E++ + DF F++ K+ ++T N L+ L
Sbjct: 478 GHHLKNIEHPERMTLFRMV--FLDF-----RFLE-----QKIRHDSTAWNASGSILNTLQ 525
Query: 498 NLKI-KNNLLTVDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDN--KIGVIVEYNG 554
LK K + D K + L++ I + F L K NLI + + +I ++ E
Sbjct: 526 QLKFYKPYICDNDPKYERLVNAILD------F-LPKIEENLICSKYTDLLRIALMAEDEA 578
Query: 555 DNESAVKDVA 564
E A K V
Sbjct: 579 IFEEAHKQVQ 588
Score = 67.2 bits (163), Expect = 3e-11
Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 83/354 (23%)
Query: 6 RDIDLFNKPDNIFRMNPYGQVPILVERDLILYES---NIINEYIDERF---PYPQLMSSD 59
R + + F L + L +++ +Y+D R P ++++++
Sbjct: 273 RFKQVTD-----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-REVLTTN 326
Query: 60 PLMRARARLMLLN-FEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNK 118
P L+ + I L +N ++ + I L L P +
Sbjct: 327 PR--------RLSIIAESIRDGLATWDNWKHVN----CDKLTTIIESSLNVLEPAEYRKM 374
Query: 119 YMLGDEFSML--DVVIAP----LLWR-LDYYG----INLSKSASPLIK-YAERIFSRPS- 165
+ D S+ I L+W + +N S + K E S PS
Sbjct: 375 F---DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 166 YMESLTPAEKIMQAGVH-------FGHQTRFWN----PKMSSYIF---GHRNKIHIINLE 211
Y+E E + +H +T + P + Y + GH H+ N+E
Sbjct: 432 YLELKVKLEN--EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH----HLKNIE 485
Query: 212 KTLYMYEKA--IRYIYQ-LGFSKGTLLFVGTKRQARGVIAN--EAVRAGMPFI------D 260
E+ R ++ F + + T A G I N + ++ P+I
Sbjct: 486 ----HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY 541
Query: 261 QRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR-KLSKKEALLFYRKQMKLNR 313
+R + +L I+ ++ K DL +R L ++ +F ++ R
Sbjct: 542 ERLVNAILDFLPKIEENLICSKYTDL------LRIALMAEDEAIFEEAHKQVQR 589
Score = 61.8 bits (149), Expect = 9e-10
Identities = 99/688 (14%), Positives = 208/688 (30%), Gaps = 171/688 (24%)
Query: 371 DDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKL 430
D K I+ F DA +CK LSK EEI
Sbjct: 8 DFETGEHQYQYKDILSVFEDA----------FVDNFDCKDVQDMPKSILSK-EEI----- 51
Query: 431 GKKILNISNRNAKDGVIAIYISEKVGSLVEINCETDFVAKNNEFIKFS-KKIAKLITENT 489
I+ + + + + K +V+ E + + N +F+ K + + T
Sbjct: 52 -DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE-EVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 490 PINLDQLNNLKIKNNLLTVDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVI 549
+ ++Q + L N + K +SR+ +K+R+ L + L K V+
Sbjct: 110 RMYIEQRDRLYNDNQVFA-----KYNVSRLQPYLKLRQ-ALLE--------LRPAK-NVL 154
Query: 550 VEYNGDN--------ESAVKDVAMHIAAMKPI---ALSSDQIPKKIIEKEYSLAVLKAQQ 598
++ G + I L + P+ ++E L
Sbjct: 155 ID--GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN 212
Query: 599 LGEALMKGDAYNINSSIIKNIISEI---SEIVSCGIELAIVIGGGNICRGISNKIQNIDR 655
+ I+ + + +C L ++ N+ +
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC---LLVL---LNVQ----------NA 256
Query: 656 STADYMG----MLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEG 711
+ +L T + D L+ + + IS++ + P +E
Sbjct: 257 KAWNAFNLSCKILLTTRFK-QVTDFLS-----AATTTHISLDHHSMTLTP-------DEV 303
Query: 712 KVVIFAGGIGNPFFT----TDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYK 767
K + + TT R + I I DG+ D +K
Sbjct: 304 KS-LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR------DGLATWDN--------WK 348
Query: 768 KITFD---EVISKKLEIMDST-------AFS-FCRDQKLPIRVFSIIKSGALKRVIEGKN 816
+ D +I L +++ S F +P + S+I +K +
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM--- 405
Query: 817 EGTLVYEIYIMIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLT 876
++++ + K L +++ K+ + +I ++ L
Sbjct: 406 ----------VVVNKLHK----YSL-----VEKQPKESTIS------IPSIYLELKVKLE 440
Query: 877 KLLKIANITLFNSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPP-LTKE 935
+ H + + I K ++ L P Y I L
Sbjct: 441 NEYAL--------HRSIVDHYN-----IPKTFDSD---DLIPPYLDQYFYSHIGHHLKNI 484
Query: 936 RREEIVKLIKNITEETKISIRKIRRD-SNENLKKLLKNKILSVDNEYR-------AQYDI 987
E + L + + + + +KIR D + N + N + + Y+ +Y+
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF-YKPYICDNDPKYE- 542
Query: 988 QKLTD--KFILEINQ-LLINKEKEILTL 1012
+ + F+ +I + L+ +K ++L +
Sbjct: 543 RLVNAILDFLPKIEENLICSKYTDLLRI 570
Score = 45.6 bits (107), Expect = 1e-04
Identities = 62/417 (14%), Positives = 134/417 (32%), Gaps = 109/417 (26%)
Query: 281 LKEMDLFITNGSIRK-LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAI----FIIDVGY 335
+ D + LSK+E I ++ + DA+ +
Sbjct: 30 VDNFDCKDVQDMPKSILSKEE-----------------IDHIIMSKDAVSGTLRLFWTLL 72
Query: 336 HKGA------VSEAIKLNIPI----IGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIV 385
K V E +++N I S Y I D ++ K V
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNV 131
Query: 386 DAFLDAKTVGELRSKTLAPIMECKKALIEAN-------------GKLSKAEEILR----- 427
R + P ++ ++AL+E GK A ++
Sbjct: 132 S-----------RLQ---PYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177
Query: 428 IKLGKKI--LNISNRNAKDGVIAIY--ISEKVGSLVEINCETDFVAKNN-EFIKFSKKIA 482
K+ KI LN+ N N+ + V+ + + ++ + K I+ ++
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ--AELR 235
Query: 483 KLITENT-PINLDQLNNLKIKNNLLTVDEKCKELI-SR---IGENIKIRRFKLFKTNNNL 537
+L+ L L N++ + CK L+ +R + + + +++
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 538 ISYLHDNKIGVIVEYNGDN-----ESAVK----DVAMHIAAMKPIALS---------SDQ 579
++ D ++++Y + +++ IA L+ D+
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHVNCDK 354
Query: 580 IPKKIIEKEYSLAVLKAQQLGE-----ALMKGDAYNINSSIIK----NIISEISEIV 627
+ IIE SL VL+ + + ++ A +I + ++ ++I +V
Sbjct: 355 L-TTIIES--SLNVLEPAEYRKMFDRLSVFPPSA-HIPTILLSLIWFDVIKSDVMVV 407
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase,
detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles
dirus} SCOP: a.45.1.1 c.47.1.5
Length = 210
Score = 64.5 bits (158), Expect = 9e-12
Identities = 27/159 (16%), Positives = 64/159 (40%), Gaps = 22/159 (13%)
Query: 2 DFEIRDIDLFN---KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFPYP-QLM 56
++ ++ + + ++NP +P LV+ +++ES I Y+ E + L
Sbjct: 25 TLNLKKTNVHDPVERDA--LTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETYAKDDTLY 82
Query: 57 SSDPLMRARARLMLLNFEK-EIF------IHLYMLENERNKTSIKGYKRAREEIRDRLIT 109
DP +R+ L F+ ++ IHL M + + + ++ K A + + +
Sbjct: 83 PKDPKVRSVV-NQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQMEKLKGALDLLEQFVT- 140
Query: 110 LAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSK 148
+ Y D ++ D+ + + L++ +L
Sbjct: 141 ------ERAYAAADHLTVADICLLGTVTALNWLKHDLEP 173
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI,
protein structure initiative; 3.00A {Caenorhabditis
elegans}
Length = 208
Score = 63.9 bits (156), Expect = 1e-11
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIF-- 78
P Q+P+L L +S I Y+ +F P A + + K+
Sbjct: 47 TPMKQLPVLNIDGFELPQSGAILRYLARKFG---FAGKTPEEEAWVD-AVHDLFKDFLAE 102
Query: 79 IHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK------NKYMLGDEFSMLDVVI 132
+ E K++ + K E T + + +++G + + D+V+
Sbjct: 103 FKKFAAERRSGKSAEEVEKFRSEFFLPARNTYFNILNGLLEKSNSGFLIGSDITFADLVV 162
Query: 133 APLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
L L YG+ + L E++ S P Y+
Sbjct: 163 VDNLLTLKNYGLFDESEFTKLAALREKVNSYPGIKEYIAK 202
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA,
structural genomics, human, NPPSFA; NMR {Homo sapiens}
SCOP: a.5.2.2
Length = 64
Score = 59.8 bits (145), Expect = 1e-11
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 390 DAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDG 445
+ + +LR KT + CKKAL G L +AE L + K+ + + G
Sbjct: 9 SKELLMKLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAASGPSSG 64
>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier,
S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo
sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A*
14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A*
3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A*
17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...
Length = 210
Score = 63.5 bits (155), Expect = 2e-11
Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 15/176 (8%)
Query: 2 DFEIRDIDLFNKPDNIFRMN-PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDP 60
++ + + + + + YGQ+P + DL LY+SN I ++ L D
Sbjct: 28 SWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTL---GLYGKDQ 84
Query: 61 LMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNK-- 118
A M+ + +++ L + G + + +L L +N+
Sbjct: 85 QEAALVD-MVNDGVEDLRCKYISLIYTNYE---AGKDDYVKALPGQLKPFETLLSQNQGG 140
Query: 119 --YMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPS---YMES 169
+++GD+ S D + LL + + L Y R+ +RP ++ S
Sbjct: 141 KTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYVGRLSARPKLKAFLAS 196
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor
complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP:
a.45.1.1 c.47.1.5
Length = 209
Score = 63.0 bits (154), Expect = 3e-11
Identities = 36/191 (18%), Positives = 71/191 (37%), Gaps = 26/191 (13%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERF-PYPQL 55
+ ++ DL KP+ F ++NP +P LV+ L+ES I Y+ E++ +L
Sbjct: 25 ELNLKLTDLMKGEHMKPE--FLKLNPQHCIPTLVDNGFALWESRAIQIYLAEKYGKDDKL 82
Query: 56 MSSDPLMRAR--ARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIR--DRLITLA 111
DP RA RL ++ + E + +
Sbjct: 83 YPKDPQKRAVVNQRLYF-----DMGTLYQRFADYHYPQIFAKQPANPENEKKMKDAVGFL 137
Query: 112 PLFLK-NKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYMESL 170
FL+ +Y G++ ++ D+ +A + + G + + + + + R +
Sbjct: 138 NTFLEGQEYAAGNDLTIADLSLAATIATYEVAGFDFAPYPN-VAAWFARCKANA------ 190
Query: 171 TPAEKIMQAGV 181
P + QAG
Sbjct: 191 -PGYALNQAGA 200
>1bg5_A MAB, fusion protein of alpha-Na,K-ATPase with glutathione
S-transferase; ankyrin binding, carrier crystallization,
ION transport; 2.60A {Rattus norvegicus} SCOP: a.45.1.1
c.47.1.5
Length = 254
Score = 63.3 bits (154), Expect = 5e-11
Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ +P ++ D+ L +S I YI ++ ++ P RA ML +I
Sbjct: 50 LEFPNLPYYIDGDVKLTQSMAIIRYIADKH---NMLGGCPKERAEI-SMLEGAVLDIRYG 105
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
+ + ++ ++K ++ + L Y+ GD + D ++ L +
Sbjct: 106 VSRIAYSKDFETLK--VDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVL 163
Query: 141 YYGINLSKSASPLIKYAERIFSRPS---YMES 169
Y + L+ + +RI + P Y++S
Sbjct: 164 YMDPMCLDAFPKLVCFKKRIEAIPQIDKYLKS 195
>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A
{Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A
Length = 229
Score = 62.1 bits (151), Expect = 9e-11
Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 12/176 (6%)
Query: 2 DFEIRDIDLFNKPDNIFR--MNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSD 59
+FE ++ + + + + + + QVP++ + L ++ I YI ++ L D
Sbjct: 29 EFEEVFLETREQYEKLLQSGILMFQQVPMVEIDGMKLVQTRAILNYIAGKYN---LYGKD 85
Query: 60 PLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREE-IRDRLITLAPLFLKN- 117
RA M + ++ L + +K E+ + +
Sbjct: 86 LKERALID-MYVGGTDDLMGFLLSFPFLSAEDKVKQCAFVVEKATSRYFPAYEKVLKDHG 144
Query: 118 -KYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+++G+ S D+ + + ++ + L + +RI S P ++
Sbjct: 145 QDFLVGNRLSWADIHLLEAILMVEEKKSDALSGFPLLQAFKKRISSIPTIKKFLAP 200
>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification
enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus
gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*
Length = 219
Score = 61.4 bits (149), Expect = 1e-10
Identities = 26/152 (17%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ +P L++ D+ L +SN I YI + + + + R +L N ++ +
Sbjct: 54 LDFPNLPYLIDGDVKLTQSNAILRYIARKH---NMCGETEVEKQRVD-VLENHLMDLRMA 109
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
L + +K E++ +L L+ + +GD+ + +D + +L +
Sbjct: 110 FARLCYSPDFEKLK--PAYLEQLPGKLRQLSRFLGSRSWFVGDKLTFVDFLAYDVLDQQR 167
Query: 141 YYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ + + L ++ +R + +YM S
Sbjct: 168 MFVPDCPELQGNLSQFLQRFEALEKISAYMRS 199
>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis
sinensis}
Length = 218
Score = 61.0 bits (148), Expect = 2e-10
Identities = 26/151 (17%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
+P + + L +S I YI ++ ++ + P+ RA+ M+ ++ +
Sbjct: 51 ELPNLPYYKDGNFSLTQSLAILRYIADKH---NMIGNTPVERAK-ISMIEGGLVDLRAGV 106
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDY 141
+ + +K +++ L + N Y+ G + LD + L + Y
Sbjct: 107 SRIAYQETFEQLK--VPYLQQLPSTLRMWSQFLGNNSYLHGSTPTHLDFMFYEALDVIRY 164
Query: 142 YGINLSKSASPLIKYAERIFSRP---SYMES 169
++ L+++ RI + P ++MES
Sbjct: 165 LDPTSVEAFPNLMQFIHRIEALPNIKAFMES 195
>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water
structu transferase; HET: GTX; 1.30A {Homo sapiens}
SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A*
1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A*
3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A*
1xwg_A 3l0h_A* 1ags_A* ...
Length = 221
Score = 61.0 bits (148), Expect = 2e-10
Identities = 30/155 (19%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ QVP++ + L ++ I YI ++ L D RA M + ++
Sbjct: 49 LMFQQVPMVEIDGMKLVQTRAILNYIASKYN---LYGKDIKERALID-MYIEGIADLGEM 104
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKN---KYMLGDEFSMLDVVIAPLLW 137
+ +L + +E+I++R LK+ Y++G++ S D+ + LL+
Sbjct: 105 ILLLPVCPPEEKDAKLALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLY 164
Query: 138 RLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
++ +L S L RI + P +++
Sbjct: 165 YVEELDSSLISSFPLLKALKTRISNLPTVKKFLQP 199
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH,
mosquito, detoxification, xenobiotics; HET: GTS; 2.50A
{Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Length = 218
Score = 60.7 bits (148), Expect = 2e-10
Identities = 27/160 (16%), Positives = 61/160 (38%), Gaps = 22/160 (13%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERDLILYESNIINEYIDERFPYP-QL 55
+ +++ +++ KPD F +NP +P + + L+L+ES +I Y+ + L
Sbjct: 27 ELDLKVLNIMEGEQLKPD--FVELNPQHCIPTMDDHGLVLWESRVILSYLVSAYGKDENL 84
Query: 56 MSSDPLMRAR--ARLM-----LLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLI 108
D RA RL L + + L ++T A L
Sbjct: 85 YPKDFRSRAIVDQRLHFDLGTLYQRVVDYYFPTIHLGAHLDQTKKAKLAEALGWFEAMLK 144
Query: 109 TLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSK 148
+ ++ + F++ D+ + + +++ + +L
Sbjct: 145 -------QYQWSAANHFTIADIALCVTVSQIEAFQFDLHP 177
>1dug_A Chimera of glutathione S-transferase-synthetic linker-C-terminal
fibrinogen gamma...; gamma chain integrin fragment; HET:
GSH; 1.80A {Schistosoma japonicum} SCOP: a.45.1.1
c.47.1.5 PDB: 1gne_A* 3qmz_T 1y6e_A 1m9a_A* 1gtb_A*
1gta_A* 1m99_A* 1m9b_A* 1ua5_A* 1u87_A* 1u88_A* 3crt_A*
3cru_A* 3d0z_A*
Length = 234
Score = 61.0 bits (148), Expect = 2e-10
Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ +P ++ D+ L +S I YI ++ ++ P RA ML +I
Sbjct: 49 LEFPNLPYYIDGDVKLTQSMAIIRYIADKH---NMLGGCPKERAEI-SMLEGAVLDIRYG 104
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
+ + ++ ++K ++ + L Y+ GD + D ++ L +
Sbjct: 105 VSRIAYSKDFETLK--VDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVL 162
Query: 141 YYGINLSKSASPLIKYAERIFSRP---SYMES 169
Y + L+ + +RI + P Y++S
Sbjct: 163 YMDPMCLDAFPKLVCFKKRIEAIPQIDKYLKS 194
>1b8x_A Protein (AML-1B); nuclear matrix targeting signal protein, signal
protein; 2.70A {Escherichia coli} SCOP: a.45.1.1
c.47.1.5
Length = 280
Score = 61.5 bits (149), Expect = 2e-10
Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ +P ++ D+ L +S I YI ++ ++ P RA ML +I
Sbjct: 49 LEFPNLPYYIDGDVKLTQSMAIIRYIADKH---NMLGGCPKERAEI-SMLEGAVLDIRYG 104
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
+ + ++ ++K ++ + L Y+ GD + D ++ L +
Sbjct: 105 VSRIAYSKDFETLK--VDFLSKLPEMLKMFEDRLCHKTYLNGDHVTHPDFMLYDALDVVL 162
Query: 141 YYGINLSKSASPLIKYAERIFSRP---SYMES 169
Y + L+ + +RI + P Y++S
Sbjct: 163 YMDPMCLDAFPKLVCFKKRIEAIPQIDKYLKS 194
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic,
heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5
Length = 224
Score = 60.6 bits (147), Expect = 3e-10
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
+ +P L++ + +SN I YI + + + R ++ N + L
Sbjct: 59 DFPNLPYLLDGKNKITQSNAILRYIARKH---NMCGETEEEKIRV-DIIENQVMDFRTQL 114
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDY 141
L + +K + EE+ +L + K + G++ + +D + +L +
Sbjct: 115 IRLCYSSDHEKLK--PQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRI 172
Query: 142 YGINLSKSASPLIKYAERIFSRP---SYMES 169
+ L + R + +Y++S
Sbjct: 173 FDPKCLDEFPNLKAFMCRFEALEKIAAYLQS 203
>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET:
GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5
PDB: 2wrt_A 1fhe_A*
Length = 216
Score = 60.2 bits (146), Expect = 3e-10
Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+P ++ L +S I YI ++ ++ + RAR M+ ++
Sbjct: 49 LDLPNLPYYIDDKCKLTQSLAILRYIADKH---GMIGTTSEERARV-SMIEGAAVDLRQG 104
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
+ + + +K + +++ + + KN Y+ G S +D ++ L +
Sbjct: 105 ISRISYQPKFEQLK--EGYLKDLPTTMKMWSDFLGKNPYLRGTSVSHVDFMVYEALDAIR 162
Query: 141 YYGINLSKSASPLIKYAERIFSRP---SYMES 169
Y + L ++ RI + P +YMES
Sbjct: 163 YLEPHCLDHFPNLQQFMSRIEALPSIKAYMES 194
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 62.8 bits (152), Expect = 5e-10
Identities = 65/339 (19%), Positives = 115/339 (33%), Gaps = 128/339 (37%)
Query: 596 AQQLGEALMKGDAYNINSSIIKNI-------------ISEISEIVSCG-IELAIVIGGGN 641
+Q+ G M D Y S +++ S I +IV + L I GG
Sbjct: 1626 SQEQG---MGMDLYK-TSKAAQDVWNRADNHFKDTYGFS-ILDIVINNPVNLTIHFGGE- 1679
Query: 642 ICRGISNKIQNIDRSTADYMGMLATI-----INSLALFDILN---KSGIISH---VMS-- 688
+G + I +Y M+ + + +F +N S ++S
Sbjct: 1680 --KG-----KRI---RENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSAT 1729
Query: 689 -----AISIEKFLESYIPLNAIKYLEEGKVV---IFAG---G--IGNPFFTTDTTAALRA 735
A+ L +K +G + FAG G AAL A
Sbjct: 1730 QFTQPAL----TLMEKAAFEDLK--SKGLIPADATFAGHSLGEY-----------AAL-A 1771
Query: 736 AEIKAEII-----LKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFC 790
+ A+++ ++ G+ + + DE+ ++ A +
Sbjct: 1772 S--LADVMSIESLVEVVFYRGMT-----------MQVAVPRDELGRSNYGMI---AIN-- 1813
Query: 791 RDQKLPIRVFSIIKSGALKRVIE--GKNEGTLVYEI---------YIMIIS-DIKK-NTK 837
P RV + AL+ V+E GK G LV EI Y+ + D++ +T
Sbjct: 1814 -----PGRVAASFSQEALQYVVERVGKRTGWLV-EIVNYNVENQQYV--AAGDLRALDTV 1865
Query: 838 QKMLNTIKILKENLKKVRTGRANIGM-LDNIQVKYHEHL 875
+LN IK+ +K+ + L+ +V+ HL
Sbjct: 1866 TNVLNFIKL-----QKIDIIELQKSLSLE--EVE--GHL 1895
Score = 58.5 bits (141), Expect = 1e-08
Identities = 94/558 (16%), Positives = 171/558 (30%), Gaps = 212/558 (37%)
Query: 104 RDRLITLAPLFLKNKYMLGDEFSMLDV--VIAPLLWRLDYYGINLSKSASPLIK-Y--AE 158
D+++ L +N Y+ G+ D+ + A LL D L K+ LIK Y A
Sbjct: 80 FDQVLNLCLTEFENCYLEGN-----DIHALAAKLLQEND---TTLVKTKE-LIKNYITAR 130
Query: 159 RIFSRP--SYMES-LTPAEKIMQAGVH--FGHQTRFWNPKMSSYIFGHRNKIHIINLEKT 213
+ RP S L A A + FG Q G N +
Sbjct: 131 IMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQ-------------G--------NTDD- 168
Query: 214 LYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKT 273
Y E +R +YQ T +
Sbjct: 169 -YFEE--LRDLYQ------------TYH---------------VLVGD-----------L 187
Query: 274 IKTSIQRLKEMDLFITNGSIRKLSK--KEALLFYRKQMKLNRVIGGIKNMNIIPDAIFII 331
IK S + L E L + +A + + + + + +N + PD +++
Sbjct: 188 IKFSAETLSE------------LIRTTLDAEKVFTQGLNILEWL---ENPSNTPDKDYLL 232
Query: 332 DVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVI--------PGN-DDSAKSIALYTK 382
+ +S P+IGV+ H YV+ PG K +++
Sbjct: 233 SI-----PIS------CPLIGVIQLAH------YVVTAKLLGFTPGELRSYLKGATGHSQ 275
Query: 383 GIV-----------DAFLDAKT--------VGELRSKTLAPIMECKKALIE---ANGK-- 418
G+V ++F + +G +R P +++E N +
Sbjct: 276 GLVTAVAIAETDSWESFFVSVRKAITVLFFIG-VRCYEAYPNTSLPPSILEDSLENNEGV 334
Query: 419 ---------LSKAEEILRIKL-------GKKILNISNRNAKDG-VIAIYISEKVG---SL 458
L++ + + GK++ IS N V++ G SL
Sbjct: 335 PSPMLSISNLTQEQVQDYVNKTNSHLPAGKQV-EISLVNGAKNLVVS-------GPPQSL 386
Query: 459 VEINCETDFVAKNNEF----IKFSKKIAKLITENTPIN-------LDQLNNLKIKNNLLT 507
+N + I FS++ K P+ L ++L I +L+
Sbjct: 387 YGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDL-INKDLVK 445
Query: 508 VDEKC--KELISRI-------GENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNES 558
+ K++ +I G +++ + ++ + D I+ E+
Sbjct: 446 NNVSFNAKDI--QIPVYDTFDGSDLR-------VLSGSISERIVD----CIIRLPVKWET 492
Query: 559 AVKDVAMHIAAMKPIALS 576
+ A HI P S
Sbjct: 493 TTQFKATHILDFGPGGAS 510
Score = 55.1 bits (132), Expect = 1e-07
Identities = 58/299 (19%), Positives = 102/299 (34%), Gaps = 97/299 (32%)
Query: 96 YKR---AREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVI-APLLWRLDYYGINLSKSAS 151
YK A++ + +R A K+ Y G FS+LD+VI P+ + ++G K
Sbjct: 1636 YKTSKAAQD-VWNR----ADNHFKDTY--G--FSILDIVINNPVNLTI-HFGGEKGKR-- 1683
Query: 152 PLIK--YAERIFSRPSYMESLTPAEKIMQAGVHFGHQTRFWNPKMSSYIFGHRNKIHIIN 209
I+ Y+ IF + ++ EKI + N +SY F +
Sbjct: 1684 --IRENYSAMIFE--TIVDGKLKTEKIFKE----------INEHSTSYTFRSEKGL---- 1725
Query: 210 LEKT------LYMYEKAIRYIYQLGFSKGTLLFVGTKRQARGVIANEAVRAG-------- 255
L T L + EKA ++ L +++G+I +A AG
Sbjct: 1726 LSATQFTQPALTLMEKA---AFED------L-------KSKGLIPADATFAGHSLGEYAA 1769
Query: 256 -------MPFID------QRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKLSKKEAL 302
M R G+ + + R + I G + +EAL
Sbjct: 1770 LASLADVMSIESLVEVVFYR---GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEAL 1826
Query: 303 LFYRKQMKLNRVIGG---IKNMNIIPDAIFIIDVGYHKGAVSEAIKL-------NIPII 351
+ ++ + + G I N N + + ++ G A+ + I II
Sbjct: 1827 QYVVER--VGKRTGWLVEIVNYN-VENQQYVA-AG-DLRALDTVTNVLNFIKLQKIDII 1880
Score = 52.0 bits (124), Expect = 1e-06
Identities = 40/286 (13%), Positives = 81/286 (28%), Gaps = 107/286 (37%)
Query: 421 KAEEILRIKLGKKILNISNRNAKDGVIAIYISEKVGSLVEINCETDFVAKNNEFIKFSKK 480
+A+ + G IL+I N + + I+ F +
Sbjct: 1648 RADNHFKDTYGFSILDIVINNPVN--LTIH--------------------------FGGE 1679
Query: 481 IAKLITENTPINLDQLNNLKIKNNLLTVDEKCKELISRIGENIKIRRFK-----LFKTNN 535
K I E N + I ++ K +++ I E+ F+ L T
Sbjct: 1680 KGKRIRE----NYSAM----IFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQF 1731
Query: 536 N-----LISY-----LHDNKIGVIV-----------EYNGDNESAVKDVAMHIAAMKPIA 574
L+ L G+I EY +A+ + +A
Sbjct: 1732 TQPALTLMEKAAFEDLKSK--GLIPADATFAGHSLGEY-----AAL--AS--LAD----V 1776
Query: 575 LS-SDQIPKKIIEK--EYSLAVLKAQQLGEALMKGDAYN-------INSSIIKNIISEIS 624
+S + +++ + +LG + A N + ++ ++ +
Sbjct: 1777 MSIESLV--EVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVG 1834
Query: 625 EIVSCGIELA--------IVIGG--------GNICRGISNKIQNID 654
+ +E+ V G N+ K+Q ID
Sbjct: 1835 KRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLN--FIKLQKID 1878
Score = 47.0 bits (111), Expect = 4e-05
Identities = 56/345 (16%), Positives = 107/345 (31%), Gaps = 122/345 (35%)
Query: 212 KTLY--------MYEKAIRYIYQ-LGFS----------KGTLLFVGTKRQARGVIANEAV 252
LY ++ +A + GFS T+ F G K + +
Sbjct: 1633 MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKR--------I 1684
Query: 253 RAG-MPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRKLSKKE-ALLFYRKQMK 310
R I + + G L K K + + LS + Q
Sbjct: 1685 RENYSAMIFETIVDGKLKTEKIFKEINEHSTS---YTFRSEKGLLSATQFT------Q-- 1733
Query: 311 LNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTN-----HS---PDG 362
P A+ +++ A E +K G++ + HS
Sbjct: 1734 --------------P-ALTLMEK-----AAFEDLKSK----GLIPADATFAGHSLGE--- 1766
Query: 363 INYVIPGNDDSAKSIALYTKGIVDAFLDA-KTVGELRSKTLAPIMECKKALIEANGKLSK 421
Y AL + V + + V R T+ + + G+ +
Sbjct: 1767 --YA-----------ALASLADVMSIESLVEVV-FYRGMTMQVAVP-----RDELGRSNY 1807
Query: 422 AEEILRIKLGKKILNISNRNAKDGVIAIYISEKVGSLVEI---NCETD-FVAKNNEFIKF 477
++ I G+ + ++ A V+ + ++ G LVEI N E +VA
Sbjct: 1808 G--MIAINPGR-VAASFSQEALQYVVER-VGKRTGWLVEIVNYNVENQQYVA-------- 1855
Query: 478 SKKIAKLITENTPINLDQLNNLKIKN-NL--LTVD---EKCKELI 516
+ + L +T N+ LN +K++ ++ L E+ + +
Sbjct: 1856 AGDLRAL---DTVTNV--LNFIKLQKIDIIELQKSLSLEEVEGHL 1895
Score = 38.1 bits (88), Expect = 0.017
Identities = 45/306 (14%), Positives = 88/306 (28%), Gaps = 113/306 (36%)
Query: 753 YNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVI 812
Y + +A + + ++ D+ + I+ + + I
Sbjct: 1636 YKTSK----AA---QDV-WNR--------ADN-----HFKDTYGFSILDIVINNPVNLTI 1674
Query: 813 -EGKNEGTLVYEIYIMIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKY 871
G +G + E Y +I + + K K K + E+ T R+ G+L
Sbjct: 1675 HFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSY-TFRSEKGLLS------ 1727
Query: 872 HEHLTKLLKIANITLFNSHTISIQPFE--KEMSSIIKKAIN------E-------AN-LG 915
T+ + A L + FE K I A E A+ +
Sbjct: 1728 ---ATQFTQPA---LT---LMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMS 1778
Query: 916 LNPTIQ-----GNIIYVSIP---------------P------LTKERREEIVKLIKNITE 949
+ ++ G + V++P P ++E + +V+ + T
Sbjct: 1779 IESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTG 1838
Query: 950 ETKISIRKIRRDSNEN-----------------LKKLLK-NKILSVDNEYRAQYDIQKLT 991
+ I N N + +L K+ + DI +L
Sbjct: 1839 W-LVEI------VNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKI--------DIIELQ 1883
Query: 992 DKFILE 997
LE
Sbjct: 1884 KSLSLE 1889
Score = 32.3 bits (73), Expect = 1.0
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 20/94 (21%)
Query: 894 IQPFEKEM-------SSIIKKAINEA------NLGLNPT--IQGNIIYVSI---PPLTKE 935
Q E+ M S + N A G + + N + ++I K
Sbjct: 1626 SQ--EQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKR 1683
Query: 936 RREEIVKLIKNITEETKISIRKIRRDSNENLKKL 969
RE +I + K+ KI ++ NE+
Sbjct: 1684 IRENYSAMIFETIVDGKLKTEKIFKEINEHSTSY 1717
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive,
ACT DOMA amino-acid biosynthesis, threonine
biosynthesis; HET: ANP; 2.30A {Methanocaldococcus
jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Length = 473
Score = 62.0 bits (151), Expect = 6e-10
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 32/168 (19%)
Query: 694 KFLESYIPLNAIKYLEEGKVVIFAGGIG-NPF--FTT------DTTAALRAAEIKAEIIL 744
+ + + L+EG + + G IG TT D +AAL + A+II
Sbjct: 168 RVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIE 227
Query: 745 KATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLE-------IMDSTAFSFCRDQKLPI 797
T V G+Y +DP +A K+++ E +E ++ ++ +PI
Sbjct: 228 IWTDVSGVYTTDPRLVPTARRIPKLSYIEA----MELAYFGAKVLHPRTIEPAMEKGIPI 283
Query: 798 RVFSIIKSGALKRVIEGKNEGTLVYEIYIM---IISDIKKNTKQKMLN 842
V K E ++EGTL+ M I+ I ++N
Sbjct: 284 LV---------KNTFEPESEGTLITNDMEMSDSIVKAISTIKNVALIN 322
>1b48_A GST, mgsta4-4, protein (glutathione S-transferase); subunit
cooperativity; HET: HAG GSH; 2.60A {Mus musculus} SCOP:
a.45.1.1 c.47.1.5 PDB: 1guk_A
Length = 221
Score = 59.4 bits (144), Expect = 6e-10
Identities = 24/154 (15%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
+GQVP++ ++L ++ I Y+ ++ L D R R M + +++ + +
Sbjct: 50 LFGQVPLVEIDGMMLTQTRAILSYLAAKY---NLYGKDLKERVRID-MYADGTQDLMMMI 105
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKN---KYMLGDEFSMLDVVIAPLLWR 138
+ + K + Y + R + LK+ +++G++ S D+ + +
Sbjct: 106 AVAPFKTPKEKEESYDLILSRAKTRYFPVFEKILKDHGEAFLVGNQLSWADIQLLEAILM 165
Query: 139 LDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
++ + L + RI + P +++
Sbjct: 166 VEELSAPVLSDFPLLQAFKTRISNIPTIKKFLQP 199
>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST;
HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A*
3f6f_A 3gh6_A* 1jlv_A*
Length = 209
Score = 59.1 bits (144), Expect = 7e-10
Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 32/194 (16%)
Query: 2 DFEIRDIDLFN----KPDNIFR-MNPYGQVPILVERDLILYESNIINEYIDERF-PYPQL 55
+ + ++L KP+ F +NP +P LV+ L+ES I Y+ E++ L
Sbjct: 26 ELNKKLLNLQAGEHLKPE--FLKINPQHTIPTLVDNGFALWESRAIQVYLVEKYGKTDSL 83
Query: 56 MSSDPLMRAR--ARLML------LNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRL 107
P RA RL +F + ++ A ++I
Sbjct: 84 YPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQVF--------AKAPADPEAFKKIEAAF 135
Query: 108 ITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPSYM 167
L Y GD ++ D+ + + + +SK A+ + ++ E
Sbjct: 136 EFLNTFLEGQDYAAGDSLTVADIALVATVSTFEVAKFEISKYAN-VNRWYEN-------A 187
Query: 168 ESLTPAEKIMQAGV 181
+ +TP + AG
Sbjct: 188 KKVTPGWEENWAGC 201
>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma
class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP:
a.45.1.1 c.47.1.5 PDB: 1gsq_A*
Length = 202
Score = 58.5 bits (142), Expect = 9e-10
Identities = 22/156 (14%), Positives = 53/156 (33%), Gaps = 13/156 (8%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
+P+L + +S I ++ F L L + R + ++IF +
Sbjct: 46 YSNAMPVLDIDGTKMSQSMCIARHLAREFG---LDGKTSLEKYRV-DEITETLQDIFNDV 101
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLIT-----LAPLFLKNKYMLGDEFSMLDVVIAPLL 136
++ ++ E+ RL L + + +G+ ++ D+ L
Sbjct: 102 VKIKFAPEAAKEA-VQQNYEKSCKRLAPFLEGLLVSNGGGDGFFVGNSMTLADLHCYVAL 160
Query: 137 WRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ L K ++ +R+ P +Y++
Sbjct: 161 EVPLKHTPELLKDCPKIVALRKRVAECPKIAAYLKK 196
>2cvd_A Glutathione-requiring prostaglandin D synthase;
glutathione-S-transferase, isomerase; HET: GSH HQL;
1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB:
1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A*
2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*
Length = 198
Score = 57.7 bits (140), Expect = 2e-09
Identities = 23/179 (12%), Positives = 67/179 (37%), Gaps = 24/179 (13%)
Query: 2 DFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPL 61
+E I+ + P+ + P+G++PIL L L++S I Y+ + L + +
Sbjct: 27 QYEDHRIEQADWPEIKSTL-PFGKIPILEVDGLTLHQSLAIARYLTKNT---DLAGNTEM 82
Query: 62 MRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK----- 116
+ +++ + E +++ ++ E+ P ++
Sbjct: 83 EQCHVD-AIVDTLDDFMSCFPWAEKKQDV-----KEQMFNELLTYNA---PHLMQDLDTY 133
Query: 117 ---NKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
++++G + D L + +L + L+ +++ + P ++++
Sbjct: 134 LGGREWLIGMSVTWADFYWEICSTTLLVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKR 192
>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm,
polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A
1gul_A*
Length = 222
Score = 57.9 bits (140), Expect = 2e-09
Identities = 27/158 (17%), Positives = 61/158 (38%), Gaps = 16/158 (10%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ QVP++ + L ++ I YI ++ L + R M + ++
Sbjct: 50 LLFQQVPMVEIDGMKLVQTRSILHYIADKHN---LFGKNLKERTLID-MYVEGTLDLLEL 105
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK------NKYMLGDEFSMLDVVIAP 134
L M + K ++ R P+F K +++G++ S+ DV++
Sbjct: 106 LIMHPFLKPDDQQKEVVNMAQKAIIRYF---PVFEKILRGHGQSFLVGNQLSLADVILLQ 162
Query: 135 LLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ L+ N+ + L +Y ++ + P ++E
Sbjct: 163 TILALEEKIPNILSAFPFLQEYTVKLSNIPTIKRFLEP 200
>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP:
a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A*
2aaw_A* 3fr6_A 3fr3_A*
Length = 211
Score = 57.5 bits (139), Expect = 2e-09
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 21/160 (13%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+ QVPIL DLIL +S I Y+ +++ + L A M+ ++I
Sbjct: 55 PFEQVPILQIGDLILAQSQAIVRYLSKKY---NICGESELNEFYAD-MIFCGVQDIHYKF 110
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK---------NKYMLGDEFSMLDVVI 132
+ E + LK Y +G+ + D+ +
Sbjct: 111 NNTNLFKQNE-----TTFLNEDLPKWSGYFEKLLKKNHTNNNNDKYYFVGNNLTYADLAV 165
Query: 133 APLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
L ++ + K+ L + E I + P +Y+ +
Sbjct: 166 FNLYDDIETKYPSSLKNFPLLKAHNEFISNLPNIKNYITN 205
>2fno_A AGR_PAT_752P; thioredoxin fold, GST C-terminal domain-like fold,
structura genomics, joint center for structural
genomics, JCSG; 2.00A {Agrobacterium tumefaciens} SCOP:
a.45.1.1 c.47.1.5
Length = 248
Score = 58.0 bits (140), Expect = 3e-09
Identities = 23/187 (12%), Positives = 62/187 (33%), Gaps = 24/187 (12%)
Query: 2 DFEIRDIDL---FNKPDNIFRMNPYGQVPILVER--DLILYESNIINEYIDERFPYPQLM 56
++ D+D + + P+L++R + + + I Y+ ER ++
Sbjct: 44 SWDEHDVDAIEGLMDCGAEKQPVAFMGPPVLIDRERNFAISQMPAIAIYLGERL---DIL 100
Query: 57 SSDPLMRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIR------DRLITL 110
+ R + ++N ++ L + T + ++ ++
Sbjct: 101 PATVEGRTLS-AKIVNDANDVLDELTLNGGREMWTP-EKWQEFVPRLQKWIRIFADTGAR 158
Query: 111 APLFLKNKYMLG-DEFSMLDVVIAPLL----WRLDYYGINLSKSASPLIKYAERIFSRPS 165
L + +MLG ++ + D+V A L R + ++ + + R+ +
Sbjct: 159 NGLSAASGFMLGTEKIGVADIVTAILWTTVADRFPAIKGIIEDTSPIIWGLSRRVVATAP 218
Query: 166 ---YMES 169
Sbjct: 219 LAALNSK 225
>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus}
SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*
Length = 208
Score = 57.4 bits (139), Expect = 3e-09
Identities = 24/159 (15%), Positives = 50/159 (31%), Gaps = 21/159 (13%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
+GQ+P L + D + +S I ++ ++ L + + M +++ +
Sbjct: 46 QFGQLPCLYDGDQQIVQSGAILRHLARKYN---LNGENEMETTYI-DMFCEGVRDLHVKY 101
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK--------NKYMLGDEFSMLDVVIA 133
+ + + I + F K +LGD+ S D +
Sbjct: 102 TRMIYMAYE---TEKDPYIKSILPGEL---AKFEKLLATRGNGRNLILGDKISYADYALF 155
Query: 134 PLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
L + L + +R+ RP Y E
Sbjct: 156 EELDVHQILDPHCLDKFPLLKVFHQRMKDRPKLKEYCEK 194
>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene
family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A
3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A*
2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A*
2gst_A* ...
Length = 218
Score = 57.1 bits (138), Expect = 4e-09
Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 9/152 (5%)
Query: 21 NPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIH 80
+ +P L++ + +SN I YI + L + R +L N + +
Sbjct: 55 LDFPNLPYLIDGTHKITQSNAILRYIARKH---NLCGESEKEQIRE-DILENQFMDSRMQ 110
Query: 81 LYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD 140
L L + + +K + + + L + K + LGD+ + +D + +L R
Sbjct: 111 LAKLCYDPDFEKLK--PEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQ 168
Query: 141 YYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ + + L + R +YM+S
Sbjct: 169 VFEPSCLDAFPNLKDFISRFEGLEKISAYMKS 200
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus}
SCOP: a.45.1.1 c.47.1.5
Length = 206
Score = 56.3 bits (136), Expect = 5e-09
Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 14/158 (8%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+GQVP+L L +S I Y+ + F + P A L + + +
Sbjct: 47 PFGQVPVLEVDGQQLAQSQAICRYLAKTF---GFAGATPFESALID-SLADAYTDYRAEM 102
Query: 82 YMLENE-RNKTSIKGYKRAREEIRDRLITLAPLFLK------NKYMLGDEFSMLDVVIAP 134
+ K + + K + +++GD+ S +D+++A
Sbjct: 103 KTYYYTALGFMTGDVDKPKTDVLLPARTKFLGFITKFLKKNSSGFLVGDKISWVDLLVAE 162
Query: 135 LLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ + + + + ERI P ++E+
Sbjct: 163 HVADMTNRVPEYIEGFPEVKAHMERIQQTPRIKKWIET 200
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated
protein, indomethacin, isomerase; HET: IMN; 2.60A
{Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB:
2pbj_A*
Length = 290
Score = 56.8 bits (136), Expect = 1e-08
Identities = 17/129 (13%), Positives = 48/129 (37%), Gaps = 12/129 (9%)
Query: 1 MDFEIRDIDLFNKPDNIFRMNPYGQVPILVERD----LILYESNIINEYIDERFPYPQLM 56
+ +++ +++ + + + + Y +VPILV ++ L +S++I + Q +
Sbjct: 38 LPYQVVEVNPVLRAE--IKFSSYRKVPILVAQEGESSQQLNDSSVIISALKTYLVSGQPL 95
Query: 57 SSDPLMRARARLM------LLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITL 110
+ + + F + ++ L E ++ + + + + L
Sbjct: 96 EEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQVYSGKEARTEEMKWRQWADDWL 155
Query: 111 APLFLKNKY 119
L N Y
Sbjct: 156 VHLISPNVY 164
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein
structure initiative, N SGX research center for
structural genomics; HET: GSH; 1.75A {Pseudomonas
fluorescens}
Length = 210
Score = 55.3 bits (134), Expect = 1e-08
Identities = 39/206 (18%), Positives = 77/206 (37%), Gaps = 42/206 (20%)
Query: 1 MDFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERD-LILYESNIINEYIDERFPYPQ 54
+ +E + +D+ F NP G++P+L D L+ESN I ++ + Q
Sbjct: 27 LPYEWQAVDILGGDTQTEA--FLAKNPNGKIPVLELEDGTCLWESNAILNFLADGS---Q 81
Query: 55 LMSSDPLMRARAR--LMLLNFEKE------IFIHLYMLENERNKTSIKGY----KRAREE 102
+ S+P +R + + E FI LY E + +A +
Sbjct: 82 FLPSEPRLRTQVLQWQFFEQYSHEPYIAVARFIQLYEGLPEERREEYLKLHKRGYKALDV 141
Query: 103 IRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFS 162
+ +L + Y++G+ +S+ D+ + D G +LS+ + + +R+ S
Sbjct: 142 MEKQLS-------RTPYLVGEHYSIADIALYAYTHVADEGGFDLSRYPG-IQAWMQRVQS 193
Query: 163 RPSYMESLTPAEKIMQAGVHFGHQTR 188
P + + GH
Sbjct: 194 HPRH-----------VPMLDEGHHHH 208
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A
{Necator americanus}
Length = 206
Score = 54.7 bits (132), Expect = 2e-08
Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 15/178 (8%)
Query: 2 DFEIRDIDLFNKPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPL 61
+E P + M P+GQ+P+L E L +S I Y+ +F P
Sbjct: 28 KYEDVRYTFQEWPKHKDEM-PFGQIPVLEEDGKQLAQSFAIARYLSRKF---GFAGKTPF 83
Query: 62 MRARARLMLLNFEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFL------ 115
A + + K+ + ++ +E+ F+
Sbjct: 84 EEALVD-SVADQYKDYINEIRPYLRVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEK 142
Query: 116 -KNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRPS---YMES 169
K+ Y++GD + D+ +A + ++ + +AE++ S P+ ++E+
Sbjct: 143 SKSGYLVGDSVTYADLCLAEHTSGIAAKFPSIYDGFPEIKAHAEKVRSIPALKKWIET 200
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator
americanus}
Length = 206
Score = 54.3 bits (131), Expect = 2e-08
Identities = 22/158 (13%), Positives = 55/158 (34%), Gaps = 14/158 (8%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+GQVP+L L +S I Y+ +F A L + + + +
Sbjct: 47 PFGQVPVLEVDGKQLAQSLAICRYLARQF---GFAGKSTFDEAVV-DSLADQYSDYRVEI 102
Query: 82 YMLENE-RNKTSIKGYKRAREEIRDRLITLAPLFLK------NKYMLGDEFSMLDVVIAP 134
+ +E + K + +++GD + +D++++
Sbjct: 103 KSFFYTVIGMREGDVEQLKKEVLLPARDKFFGFITKFLKKSPSGFLVGDSLTWVDLLVSE 162
Query: 135 LLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ + + + ++ E+I + P ++E+
Sbjct: 163 HNATMLTFVPEFLEGYPEVKEHMEKIRAIPKLKKWIET 200
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione
transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis
elegans}
Length = 207
Score = 54.3 bits (131), Expect = 3e-08
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 15/158 (9%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+GQ+P L L +S+ I ++ F +L A+ L + K+
Sbjct: 49 PFGQLPFLEVDGKKLAQSHAIARFLAREF---KLNGKTAWEEAQV-NSLADQYKDYSSEA 104
Query: 82 YMLENERNKTSIKGYKRAREEIR-DRLITLAPLFLK------NKYMLGDEFSMLDVVIAP 134
+ +++I + + +++GD + +D+ IA
Sbjct: 105 RPYFYAVMGFGPGDVETLKKDIFLPAFEKFYGFLVNFLKASGSGFLVGDSLTWIDLAIAQ 164
Query: 135 LLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
L G + SK L +AE+I + P ++E+
Sbjct: 165 HSADLIAKGGDFSKFPE-LKAHAEKIQAIPQIKKWIET 201
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative
initiati amino-acid biosynthesis, ATP-binding; HET: LYS;
2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Length = 421
Score = 56.4 bits (137), Expect = 3e-08
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 31/133 (23%)
Query: 706 KYLEEGKVVIFAG--GIG--NPFFTT------DTTAALRAAEIKAEIILKATKVDGIYNS 755
+ L+EGK+ I AG G+ TT DTTA AA + A++ + VDG+Y +
Sbjct: 123 EALDEGKICIVAGFQGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTA 182
Query: 756 DPNKCLSAIIYKKITFDEVISKKLE-------IMDSTAFSFCRDQKLPIRVFSIIKSGAL 808
DP +A +K++F+E+ LE I+ + + R +P+RV S
Sbjct: 183 DPRIVPNAQKLEKLSFEEM----LELAAVGSKILVLRSVEYARAFNVPLRVRSSYS---- 234
Query: 809 KRVIEGKNEGTLV 821
+ GTL+
Sbjct: 235 ------NDPGTLI 241
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A
{Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Length = 219
Score = 52.6 bits (127), Expect = 1e-07
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 41/204 (20%)
Query: 1 MDFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERD-LILYESNIINEYI------DE 48
++ ++ +L KP+ F ++NP +P LV+ D +L+ES I Y+ +
Sbjct: 24 VELNLKLTNLMAGEHMKPE--FLKLNPQHCIPTLVDEDGFVLWESRAIQIYLVEKYGAHD 81
Query: 49 RFPYPQLMSSDPLMRAR--ARLMLLNFE--------KEIFIHLYMLENERNKTSIKGYKR 98
+L SDP RA RL F+ E + + G
Sbjct: 82 ADLAERLYPSDPRRRAVVHQRLF---FDVAVLYQRFAEYYYPQIAGQK-----VPVGDPG 133
Query: 99 AREEIRDRLITLAPLFLKNKYM-LGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYA 157
+ L L +Y+ GD+ ++ D+ I + + G +L + + + ++
Sbjct: 134 RLRSMEQALEFLNTFLEGEQYVAGGDDPTIADLSILATIATYEVAGYDLRRYEN-VQRWY 192
Query: 158 ERIFSRPSYMESLTPAEKIMQAGV 181
ER ++ P G
Sbjct: 193 ER-------TSAIVPGADKNVEGA 209
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI
onchocerca volvulus, immune modulation; HET: GSH; 2.00A
{Onchocerca volvulus}
Length = 225
Score = 52.8 bits (127), Expect = 1e-07
Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 25/161 (15%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+G VP+L +L ES+ I + RF L+ ++ A+ ++ E+F L
Sbjct: 71 PFGHVPMLNVSGNVLGESHAIELLLGGRF---GLLGTNDWEEAKIM-AVVLNIDELFQKL 126
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFLK----------NKYMLGDEFSMLDVV 131
+E+N T + + + FL +++G++ S+ D+
Sbjct: 127 IPWTHEKNTT---KKAELFRNLSESDV---MPFLGRYEKFLKESTTGHIVGNKVSVADLT 180
Query: 132 IAPLLWRLDYYGINLSKSASPLIKYAERIFSRP---SYMES 169
+ +L LD + L + +I P +++
Sbjct: 181 VFNMLMTLDDEVK--LEEYPQLASFVNKIGQMPGIKEWIKK 219
>1m0u_A GST2 gene product; flight muscle protein, sigma, transferase; HET:
GSH; 1.75A {Drosophila melanogaster} SCOP: a.45.1.1
c.47.1.5
Length = 249
Score = 52.8 bits (127), Expect = 1e-07
Identities = 20/158 (12%), Positives = 62/158 (39%), Gaps = 17/158 (10%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P GQ+P+L +++S + ++ + L + P + ++++ + + +
Sbjct: 93 PMGQMPVLEVDGKRVHQSISMARFLAKTV---GLCGATPWEDLQI-DIVVDTINDFRLKI 148
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLIT--LAPL--FLKNK--YMLGDEFSMLDVVIAPL 135
++ E + ++ + +I L L +K+ ++ + + DV A +
Sbjct: 149 AVVSYEPED---EIKEKKLVTLNAEVIPFYLEKLEQTVKDNDGHLALGKLTWADVYFAGI 205
Query: 136 LWRLDY-YGINLSKSASPLIKYAERIFSRP---SYMES 169
++Y +L + L + + + +++E
Sbjct: 206 TDYMNYMVKRDLLEPYPALRGVVDAVNALEPIKAWIEK 243
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET:
LYS; 2.54A {Synechocystis}
Length = 600
Score = 54.1 bits (131), Expect = 2e-07
Identities = 42/140 (30%), Positives = 58/140 (41%), Gaps = 40/140 (28%)
Query: 706 KYLEEGKVVIFAG--GIGNPF---FTT------DTTA-ALRAAEIKAEIILKATKVDGIY 753
+L EGKVV+ AG GI + TT DT+A AL AA +KA+ T V GI
Sbjct: 123 HHLREGKVVVVAGFQGISSVEHLEITTLGRGGSDTSAVAL-AAALKADFCEIYTDVPGIL 181
Query: 754 NSDPNKCLSAIIYKKITFDEVISKKLE-------IMDSTAFSFCRDQKLPIRV---FSII 803
+DP A + +IT DE+ LE ++ A R+ +P+ V +S
Sbjct: 182 TTDPRLVPEAQLMAEITCDEM----LELASLGAKVLHPRAVEIARNYGIPLVVRSSWS-- 235
Query: 804 KSGALKRVIEGKNEGTLVYE 823
GT V
Sbjct: 236 -----------DEPGTKVVA 244
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl
transfer, transferase; 1.53A {Streptomyces wedmorensis}
PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Length = 286
Score = 53.0 bits (127), Expect = 2e-07
Identities = 22/185 (11%), Positives = 58/185 (31%), Gaps = 14/185 (7%)
Query: 605 KGDAYNINSSIIKNIISEISEIVSCGIELAIVI-GGGNICRGISNKIQNIDRSTADYMGM 663
K + +++ + + + ++I GGG G + + +
Sbjct: 38 KDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFSLAGLTE 97
Query: 664 LATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK----YLEEGKVVIFAG- 718
+ + L G+ + + ++ L + IP + L+ G + + AG
Sbjct: 98 ATFEVKKRWA-EKLRGIGVDAFPLQLAAMC-TLRNGIPQLRSEVLRDVLDHGALPVLAGD 155
Query: 719 -----GIGNPFFTTDTTAALRAAEIKAEI-ILKATKVDGIYNSDPNKCLSAIIYKKITFD 772
F++D + ++ + ++ T VDGI + +
Sbjct: 156 ALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPE 215
Query: 773 EVISK 777
+ +
Sbjct: 216 QAYAA 220
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics,
protein structure initiative, nysgxrc; 2.04A
{Rhodopseudomonas palustris}
Length = 225
Score = 51.5 bits (124), Expect = 3e-07
Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 40/189 (21%)
Query: 1 MDFEIRDIDLFN----KPDNIFR-MNPYGQVPILVERD-LILYESNIINEYIDERFPYPQ 54
+ ++D+ PD F NP GQVP+L L ESN I Y+
Sbjct: 27 APYRAVEVDILRGESRTPD--FLAKNPSGQVPLLETAPGRYLAESNAILWYLAVGTS--- 81
Query: 55 LMSSDPLMRARA--RLML-----------LNFEKEIFIHLYMLENERNKTSIKGY----K 97
L + RA A + F ++ L + +++ +
Sbjct: 82 LAPDTRMDRAEALQWMFFEQHALEPNIGSAYF----WLCLVKGGRDLQTHALEDWLERGY 137
Query: 98 RAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYA 157
A + + + L N Y + ++ D+ + D +LS + + +
Sbjct: 138 AALQVMENHL-------KTNDYFAAGQLTIADIALYGYTHVADQCDFDLSTFPA-VNAWL 189
Query: 158 ERIFSRPSY 166
R+ P +
Sbjct: 190 RRVEQTPGF 198
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate
pathway, isopentenyl phsophate kinase, beta-alpha
sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A
{Thermoplasma acidophilum} PDB: 3lkk_A*
Length = 249
Score = 50.0 bits (120), Expect = 1e-06
Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 36/242 (14%)
Query: 605 KGDAYNINSSIIKNIISEISEIVSCGIELAIV----IGGGNICRGISNKIQNIDRSTADY 660
K + I++I+ +S +L V G+I + ++
Sbjct: 18 KSAYRTARTYAIRSIVKVLSG----IEDLVCVVHGGGSFGHIKAMEFGLPGPKNPRSS-- 71
Query: 661 MGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAI----KYLEEGKV--- 713
+G + L ++ + +I M IS+ Y +Y++ G V
Sbjct: 72 IGYSIVHRDMENLDLMVIDA-MIEMGMRPISVPISALRYDGRFDYTPLIRYIDAGFVPVS 130
Query: 714 ---VIFAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKIT 770
V ++ D A A +K ++ + T VDGIY+ DP + A++ + I
Sbjct: 131 YGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDID 190
Query: 771 FDEVISK-----------KLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGT 819
+ + K E + K + + + + + + GT
Sbjct: 191 TNITFDRVQNDVTGGIGKKFE----SMVKMKSSVKNGVYLINGNHPERIGDIGKESFIGT 246
Query: 820 LV 821
++
Sbjct: 247 VI 248
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A
{Haemonchus contortus}
Length = 204
Score = 48.5 bits (116), Expect = 2e-06
Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 22/161 (13%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKEIFIHL 81
P+GQ+P+L L +S I Y+ + A + + K+ +
Sbjct: 47 PFGQLPVLEVDGKQLPQSVAIVRYLARK---FGYAGKSAWEEAVVD-SIADQFKDFLNEV 102
Query: 82 YMLENERNKTSIKGYKRAREEIRDRLITLAPLFL----------KNKYMLGDEFSMLDVV 131
K +++ + F K Y++GD + D+
Sbjct: 103 RPYFKVLLGMDQGDLKALEKDVFEPAR---QKFFTIVTKILKENKTGYLVGDSLTFADLY 159
Query: 132 IAPLLWRLDYYGINLSKSASPLIKYAERIFSRPS---YMES 169
+A + + L + +AE++ S P ++E+
Sbjct: 160 VAEMG--FTEHYPKLYDGFPEVKAHAEKVRSNPKLKKWIET 198
>3h1n_A Probable glutathione S-transferase; APC84167, bordetella
bronchisepti structural genomics, PSI-2, protein
structure initiative; 1.83A {Bordetella bronchiseptica
RB50}
Length = 252
Score = 48.7 bits (116), Expect = 3e-06
Identities = 24/166 (14%), Positives = 45/166 (27%), Gaps = 21/166 (12%)
Query: 22 PYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLML-----LNFEKE 76
P P LV + + ++ I ++ L D R + L E
Sbjct: 70 PPFAPPYLVADGMTIAQTANILLFLGVEHG---LAPPDRAGRLWVNQLQLTIADLTAEAH 126
Query: 77 IFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLF---LKN---KYMLGDEFSMLDV 130
H +RA + R+ F L +S D+
Sbjct: 127 DVHHPVAAGLYYEDQQDVALRRAADFRETRMPKFMQYFEQALDRPGGWLTDMGRWSYADL 186
Query: 131 VIAPLLWRLDYYGINLSKSASP----LIKYAERIFSRP---SYMES 169
+ ++ L + ++ L+ R+ P Y+ S
Sbjct: 187 SLYHVVEGLLHAFPRRMRTLVHRYPRLMALHARVAELPELRGYLAS 232
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory
domains, kinase transferase, PSI-2, protein structure
initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Length = 446
Score = 49.6 bits (119), Expect = 3e-06
Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 13/187 (6%)
Query: 598 QLGEALMKGDAYNINSSIIKNIISEISEI-VSCGIELAIVIGGGNICRGISNKIQNIDRS 656
++ + L +A+ N ++ IS+ EL I + + I+N +
Sbjct: 50 KITDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIENG--A 107
Query: 657 TADYMGMLATIINSLALFDILNKSGI-ISHVMSAISIEKFLESYIPLNAIKYLEEGKVVI 715
++DY +N + L LN I + V+ F E + + +
Sbjct: 108 SSDYAASRGEYLNGVILAKYLNAEFIDAAEVIFFDKSGCFDEKKSYEKIKEKVLSCNKAV 167
Query: 716 FAGGIG-NPFFTTDT--------TAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIY 766
G G + T T ++ +A + A++ T V G +DP +
Sbjct: 168 IPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTI 227
Query: 767 KKITFDE 773
KI++ E
Sbjct: 228 SKISYKE 234
>1oe8_A Glutathione S-transferase; schistosomiasis, detoxifying enzyme,
prostaglandin D2 synthase, vaccine candidate; HET: GSH;
1.65A {Schistosoma haematobium} SCOP: a.45.1.1 c.47.1.5
PDB: 1oe7_A* 2c80_A* 2ca8_A* 2f8f_A* 2c8u_A 2caq_A*
2cai_A* 1u3i_A*
Length = 211
Score = 46.7 bits (111), Expect = 1e-05
Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 12/165 (7%)
Query: 13 KPDNIFRMNPYGQVPILVERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLN 72
KP P ++ + ES I Y+ ++ +M L+
Sbjct: 45 KPTIPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKH---HMMGGTEEEYYNVE-KLIG 100
Query: 73 FEKEIFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPLFLKN---KYMLGDEFSMLD 129
+++ Y + + K K L+ + LK K +GD+ ++ D
Sbjct: 101 QAEDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLAD 160
Query: 130 VVIAPLL-WRLDYYGINLSKSASPLIKYAERIF-SRP---SYMES 169
+V+ ++ D L+ + K+ E + S P Y+
Sbjct: 161 LVLIAVIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSD 205
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain,
alloste S-adenosylmethionine, lysine, allosteric
effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis
thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Length = 510
Score = 46.6 bits (111), Expect = 3e-05
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 10/95 (10%)
Query: 689 AISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFT----------TDTTAALRAAEI 738
+E + ++ + V I G +G + T +D TA +
Sbjct: 185 GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKAL 244
Query: 739 KAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDE 773
+ I VDG+ DP A +TFDE
Sbjct: 245 GLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDE 279
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric
regulation, ACT domain, transferase, amino acid
biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP:
c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Length = 449
Score = 45.7 bits (109), Expect = 6e-05
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 708 LEEGKVVIFAGGIG-NPFFTTDT--------TAALRAAEIKAEIILKATKVDGIYNSDPN 758
+VI G IG T T TAAL A + A + T V GIY +DP
Sbjct: 173 RLNEGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPR 232
Query: 759 KCLSAIIYKKITFDE 773
+A +I F E
Sbjct: 233 VVSAAKRIDEIAFAE 247
>4exj_A Uncharacterized protein; transferase-like protein, transcription
regulation, transfer structural genomics; 1.64A
{Lodderomyces elongisporus nrrl yb-4239}
Length = 238
Score = 40.8 bits (96), Expect = 0.001
Identities = 29/200 (14%), Positives = 59/200 (29%), Gaps = 34/200 (17%)
Query: 2 DFEIRDIDLFN----KPDNIF-RMNPYGQVPILVERD-LILYESNIINEYIDERF----P 51
++ + + ++NP G VP LV+ + ESN I YI + +
Sbjct: 27 PIKVHMFHWPTKDIQEDW--YLKLNPAGIVPTLVDDKGTPITESNNILLYIADTYDKEHK 84
Query: 52 YPQLMSSDPLMRARA--RLMLLN------FEKEIFIHLYMLENERNKTSIKGYKRAREEI 103
+ + DP + L + N +I +
Sbjct: 85 FFYSLKQDPKLYWEQNELLFYQATQFQSQTLTIANANYQ---NGHIDENIA--QYVLSSF 139
Query: 104 RDRLITLAPLFL-KNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKY------ 156
++ L + +GD+F+++D+ R N +
Sbjct: 140 E-KVFAFMETKLSGRDWFVGDKFTIVDIAFLVGEHRRRERLHNSPIWIDLKENFPNVEKW 198
Query: 157 AERIFSRPSYMESLT-PAEK 175
+R + + E L A +
Sbjct: 199 FQRAIAFENVEEILKEHAAE 218
>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH;
1.59A {Fasciola hepatica} PDB: 2wdu_A*
Length = 211
Score = 39.7 bits (93), Expect = 0.002
Identities = 24/163 (14%), Positives = 59/163 (36%), Gaps = 21/163 (12%)
Query: 22 PYGQVPILV-----ERDLILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFEKE 76
P G+VP+L + ES I + +F ++M ++ ++
Sbjct: 49 PGGRVPLLDVTGPDGKLRRYQESMAIARLLARQF---KMMGETDEEYYLI-ERIIGECED 104
Query: 77 IFIHLYMLENERNKTSIKGYKRAREEIRDRLITLAPL--FLKN---KYMLGDEFSMLDVV 131
++ +Y + K +E L L + L++ K++ G+ ++ D+
Sbjct: 105 LYREVYTIFRTPQGEKEAKIKEFKENNGPTL--LKLVSESLESSGGKHVAGNRITLGDLF 162
Query: 132 IAPLL-WRLDYYGINLSKSASPLIKYAERIF-SRP---SYMES 169
+ L ++ L + L ++ + + S Y++
Sbjct: 163 LFTTLTHVMETVPGFLEQKFPKLHEFHKSLPTSCSRLSEYLKK 205
>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene
regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae}
SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A*
1k0a_A* 1g6w_A 1g6y_A 1hqo_A
Length = 260
Score = 38.6 bits (90), Expect = 0.006
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 42/189 (22%)
Query: 19 RMNPYGQVPILVERD---LILYESNIINEYIDERF----PYPQLMSSDPLMRARAR--LM 69
+NP +VP L++ L ++ES I ++ ++ P L S D +++ L
Sbjct: 64 SVNPNARVPALIDHGMDNLSIWESGAILLHLVNKYYKETGNPLLWSDDLADQSQINAWLF 123
Query: 70 L---------------LNFEKEIF---IHLYMLENER---------------NKTSIKGY 96
F + + Y E R +
Sbjct: 124 FQTSGHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVMELDTE 183
Query: 97 KRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKY 156
A ++ + F +++GD+ ++ D+ P +D GIN+ + K+
Sbjct: 184 NAAAYSAGTTPMSQSRFFDYPVWLVGDKLTIADLAFVPWNNVVDRIGINIKIEFPEVYKW 243
Query: 157 AERIFSRPS 165
+ + RP+
Sbjct: 244 TKHMMRRPA 252
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid,
transferase; HET: ADP; 2.15A {Methanothermobacter
thermautotrophicusorganism_taxid}
Length = 269
Score = 38.4 bits (90), Expect = 0.008
Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 21/110 (19%)
Query: 728 DTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISK---------- 777
D + + E ++ T VDG+Y +P K A + I + +
Sbjct: 161 DQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVT 220
Query: 778 -----KLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKN-EGTLV 821
K+ ++ + + + G ++R + G+ GT +
Sbjct: 221 GGMVGKIR-----ELLLLAEKGVESEIINAAVPGNIERALLGEEVRGTRI 265
>3c8e_A YGHU, glutathione S-transferase homologue; glutathione transferase
homologue, E. coli; HET: GSH; 1.50A {Escherichia coli}
Length = 288
Score = 37.3 bits (87), Expect = 0.016
Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 31/167 (18%)
Query: 19 RMNPYGQVPILVERD----LILYESNIINEYIDERFPYPQLMSSDPLMRARARLMLLNFE 74
+NP ++P L + + ++ES I Y+ E+F + D R + L +
Sbjct: 94 EVNPNSKIPALRDHTHNPPIRVFESGSILLYLAEKFG--YFLPQDLAKRTET-MNWLFWL 150
Query: 75 KEI-------FIHLYMLENERNKTSIKGY----KRAREEIRDRLITLAPLFLKNKYMLGD 123
+ F H Y + + +I + KR + + +L ++K++ GD
Sbjct: 151 QGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQL-------AQHKFVAGD 203
Query: 124 EFSMLDVVIAPLLWRLDYYGINLSKSASPLIKY------AERIFSRP 164
E+++ D+ I P + G+ + Y A+ + RP
Sbjct: 204 EYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERP 250
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure
initiative, NEW YORK SGX research center for structural
genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter
jejuni} SCOP: c.73.1.3
Length = 251
Score = 34.8 bits (81), Expect = 0.11
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 728 DTTAALRAAEIKAE--IILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDST 785
D+ +A A+ +IL + +DG Y+ +P++ A K++ I ++
Sbjct: 143 DSLSAYATHFFDADLLVIL--SDIDGFYDKNPSEFSDA---KRLEKITHIKEEWLQATIK 197
Query: 786 AFS 788
S
Sbjct: 198 TGS 200
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase,
amino-acid biosynthesis, transferase, feedback
regulation, PUA domain; HET: RGP; 2.5A {Escherichia
coli} PDB: 2j5t_A* 2w21_A
Length = 367
Score = 34.4 bits (80), Expect = 0.18
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 728 DTTAALRAAEIKAE--IILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIM 782
D +AL A A+ ++L T G+Y +DP A + I I L +
Sbjct: 150 DNLSALAAILAGADKLLLL--TDQKGLYTADPRSNPQA---ELIKDVYGIDDALRAI 201
>3r3e_A Uncharacterized protein YQJG; thioredoxin domain, GST, glutathione
transferase, glutathion disulfide bond reductase,
transferase; HET: GSH; 2.21A {Escherichia coli}
Length = 328
Score = 33.6 bits (77), Expect = 0.27
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 91 TSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD--YYG 143
TS + Y A ++ + L L + +++Y+ G++ + D+ + L R D Y
Sbjct: 201 TSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVT 255
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB
target, transferase; 3.00A {Giardia lamblia atcc 50803}
Length = 317
Score = 33.5 bits (76), Expect = 0.32
Identities = 13/91 (14%), Positives = 29/91 (31%), Gaps = 20/91 (21%)
Query: 700 IPLNAIKYLEEGKVVIFAGGIGNP--------------FFTTDTTAALRAAEIKAEIILK 745
+ IK L + V++ G D +L A + ++ ++
Sbjct: 176 VEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMI 235
Query: 746 ATKVDGIYNS--DPNKCLSAIIYKKITFDEV 774
T V + P++ ++I E+
Sbjct: 236 LTDVLNACINYKKPDERK----LEEIKLSEI 262
>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete
chrysosporium}
Length = 352
Score = 33.3 bits (76), Expect = 0.38
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 91 TSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD--YYG 143
++ K Y+ A + + L L + Y++G + + D+ + + R D Y
Sbjct: 229 STQKAYEAAVIPLFESLDRLEKMLEGQDYLIGGQLTEADIRLFVTIVRFDPVYVT 283
>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C
family, structural genomics, PSI- protein structure
initiative; 2.10A {Corynebacterium glutamicum}
Length = 362
Score = 33.3 bits (76), Expect = 0.40
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 91 TSIKGYKRAREEIRDRLITLAPLFLKNKYMLGDEFSMLDVVIAPLLWRLD--YYG---IN 145
S + + A + + L L +Y++GD + D+ + P L R D Y+G
Sbjct: 207 GSQEAHNEAYKRLWVALDWLEDRLSTRRYLMGDHITEADIRLYPTLVRFDAVYHGHFKCG 266
Query: 146 LSKSAS-P-LIKYAERIFSRP 164
+K P L Y +F P
Sbjct: 267 RNKITEMPNLWGYLRDLFQTP 287
>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione
disulfide, disulfide bond oxidoreductase; HET: GDS;
2.30A {Escherichia coli}
Length = 215
Score = 32.2 bits (74), Expect = 0.65
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 116 KNKYMLGDEFSMLDVVIAPLLWRLDYYGINLSKSASPLIKYAERIFSRP 164
+ ++ G+ +S+ D+ P + I+L+ + + + ERI SRP
Sbjct: 150 NSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPA-VKNWHERIRSRP 197
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP
synthesys, open alpha/beta sheet, phosphotransferase,
transferase; HET: ADP; 1.39A {Enterococcus faecalis}
PDB: 1b7b_A 2we4_A*
Length = 310
Score = 31.8 bits (72), Expect = 1.1
Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 14/87 (16%)
Query: 700 IPLNAIKYL-EEGKVVIFAGGIGNP-----------FFTTDTTAALRAAEIKAEIILKAT 747
I L + + I GG G P D + A + A+ ++ T
Sbjct: 170 HEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILT 229
Query: 748 KVDGIYNSDPNKCLSAIIYKKITFDEV 774
VD + + + +T E+
Sbjct: 230 GVDYVCINYGKPDEKQL--TNVTVAEL 254
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA,
national project O structural and functional analyses;
1.80A {Aeropyrum pernix}
Length = 316
Score = 31.9 bits (72), Expect = 1.1
Identities = 12/92 (13%), Positives = 29/92 (31%), Gaps = 21/92 (22%)
Query: 700 IPLNAIKYLEEGKVVIFAGGIGNP---------------FFTTDTTAALRAAEIKAEIIL 744
+ + I + A G G D ++L A ++ A++++
Sbjct: 174 VDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLV 233
Query: 745 KATKVDGIYNS--DPNKCLSAIIYKKITFDEV 774
T V G+ + + ++ E+
Sbjct: 234 ILTDVPGVAVNYGREGERW----LRRAAASEL 261
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix
domain, phosphoribosyltranseferases, domain
recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE;
2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB:
1p4a_A*
Length = 291
Score = 31.5 bits (72), Expect = 1.3
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 899 KEMSSIIKKAINEANLGLNPTIQGN---IIYVSIPPLTKERREEIVKLIKN 946
E +IIK+ + +G T+ G + Y IP + + EE V+ +
Sbjct: 41 SEDLTIIKQTFEQQGIGTLLTVPGAAGGVKY--IPKMKQAEAEEFVQTLGQ 89
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 2.7
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 14/65 (21%)
Query: 934 KERREEIVKLIKNITEETKISIRKIR-----------RDSNENLKKLLK-NKILSVDNEY 981
++ REE K ++ + +K+ ++ R + +E ++K N+I D +
Sbjct: 88 RKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRI--ADKAF 145
Query: 982 RAQYD 986
Q D
Sbjct: 146 YQQPD 150
Score = 29.0 bits (64), Expect = 5.3
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 21/75 (28%)
Query: 945 KNITEETKISIRKIR---------RDSNENLKK--LLKNKILSVDNEYRAQYDIQKLTDK 993
+T+E + SIRK R D+ + + + ++ + + Q +K
Sbjct: 78 DRLTQEPE-SIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQ-RQSEQV--EK 133
Query: 994 FILEINQLLINKEKE 1008
+ N+ +
Sbjct: 134 NKIN------NRIAD 142
>2i71_A Hypothetical protein; structural genomics, APC6294, PSI-2, protein
structure initia midwest center for structural genomics,
MCSG; 1.70A {Sulfolobus solfataricus} SCOP: e.72.1.1
Length = 400
Score = 29.8 bits (66), Expect = 4.7
Identities = 23/189 (12%), Positives = 56/189 (29%), Gaps = 10/189 (5%)
Query: 724 FFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMD 783
+ A++ A + +YNSDP + K + + L +
Sbjct: 153 YMGVLAKEAIQLAVSAYAAKSEKEVKVSLYNSDPVGKDVSDTVKLHEIEAIKISPLSGLK 212
Query: 784 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDIKKNTKQKMLNT 843
+ K A+ R + G +Y S + + L+
Sbjct: 213 YVTYQILNKDKNFFNKIFSDSVNAIPRFATALDNGLFIY--LSEKDSSLHLKRLEDDLSK 270
Query: 844 IKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLK--IANITLFNSHTISIQPFEKEM 901
+L + ++ + +++ L ++ N+ L + +K
Sbjct: 271 DPLLTPSENEINV------VYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVT 324
Query: 902 SSIIKKAIN 910
+II+ ++
Sbjct: 325 RAIIENEVD 333
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis,
amino acid kinase domain GCN5-related acetyltransferase,
GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB:
3zzi_A*
Length = 464
Score = 29.6 bits (67), Expect = 6.2
Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 728 DTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAII----YKKITFDEVIS 776
D A A + I+ + GI N + +S I Y + +
Sbjct: 202 DVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSWVK 254
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Length = 315
Score = 29.3 bits (65), Expect = 7.3
Identities = 19/111 (17%), Positives = 31/111 (27%), Gaps = 12/111 (10%)
Query: 681 GIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDTTAALRAAEIKA 740
GI+ ++ + YI + +KYLE AG P T
Sbjct: 34 GILMQKCRNKVMKNYGRYYIAASYVKYLES------AGARVVPVRLDLTEKDYEILFKSI 87
Query: 741 EIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCR 791
IL G + + KI ++ I + + C
Sbjct: 88 NGILFPG---GSVDLRRSDYAKVA---KIFYNLSIQSFDDGDYFPVWGTCL 132
>3qb5_K Translin-associated protein X; alpha helical bundle, ribonuclease,
hydrolase; 2.95A {Homo sapiens} PDB: 3pja_J
Length = 290
Score = 28.9 bits (64), Expect = 7.3
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 935 ERREEIVKLIKNITEETKISIRKI-RRDSNENLKKLLK 971
++ E +VKL ++IT E+K +I + R S +++ +L
Sbjct: 51 DKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDILT 88
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase,
arginine biosynthesis, phosphoryl group transfer,
protein crystallography; HET: NLG ANP; 1.5A {Escherichia
coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A*
1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Length = 258
Score = 28.6 bits (65), Expect = 8.6
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 728 DTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKI 769
D A AA + A++IL + V GI + + ++ + K
Sbjct: 162 DQAATALAATLGADLIL-LSDVSGILD-GKGQRIAEMTAAKA 201
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.138 0.381
Gapped
Lambda K H
0.267 0.0765 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 15,482,095
Number of extensions: 1012140
Number of successful extensions: 3069
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2817
Number of HSP's successfully gapped: 224
Length of query: 1012
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 909
Effective length of database: 3,825,930
Effective search space: 3477770370
Effective search space used: 3477770370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (27.6 bits)